##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1967048v1 #!genome-build-accession NCBI_Assembly:GCF_019670485.1 #!annotation-date 08/07/2022 15:44:12 #!annotation-source NCBI RefSeq ##sequence-region NZ_AP024165.1 1 3168162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1074311 NZ_AP024165.1 RefSeq region 1 3168162 . + . ID=NZ_AP024165.1:1..3168162;Dbxref=taxon:1074311;Is_circular=true;Name=1;chromosome=1;collection-date=2004-05-14;country=Japan:Kagawa;gbkey=Src;genome=chromosome;isolation-source=sediment [ENVO_00002007];lat-lon=34.381478 N 134.100808 E;mol_type=genomic DNA;strain=04Ya108 NZ_AP024165.1 RefSeq gene 74 1480 . + . ID=gene-VA249_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=VA249_RS00005;old_locus_tag=VYA_00010 NZ_AP024165.1 Protein Homology CDS 74 1480 . + 0 ID=cds-WP_128809806.1;Parent=gene-VA249_RS00005;Dbxref=Genbank:WP_128809806.1;Name=WP_128809806.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005416782.1;locus_tag=VA249_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_128809806.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1544 2644 . + . ID=gene-VA249_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=VA249_RS00010;old_locus_tag=VYA_00020 NZ_AP024165.1 Protein Homology CDS 1544 2644 . + 0 ID=cds-WP_128809807.1;Parent=gene-VA249_RS00010;Dbxref=Genbank:WP_128809807.1;Name=WP_128809807.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020430388.1;locus_tag=VA249_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_128809807.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2654 3733 . + . ID=gene-VA249_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=VA249_RS00015;old_locus_tag=VYA_00030 NZ_AP024165.1 Protein Homology CDS 2654 3733 . + 0 ID=cds-WP_221068399.1;Parent=gene-VA249_RS00015;Dbxref=Genbank:WP_221068399.1;Name=WP_221068399.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458661.1;locus_tag=VA249_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_221068399.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3747 6164 . + . ID=gene-VA249_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=VA249_RS00020;old_locus_tag=VYA_00040 NZ_AP024165.1 Protein Homology CDS 3747 6164 . + 0 ID=cds-WP_221068400.1;Parent=gene-VA249_RS00020;Dbxref=Genbank:WP_221068400.1;Name=WP_221068400.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458663.1;locus_tag=VA249_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_221068400.1;transl_table=11 NZ_AP024165.1 RefSeq gene 6591 7028 . + . ID=gene-VA249_RS00025;Name=VA249_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00025;old_locus_tag=VYA_00050 NZ_AP024165.1 Protein Homology CDS 6591 7028 . + 0 ID=cds-WP_221068401.1;Parent=gene-VA249_RS00025;Dbxref=Genbank:WP_221068401.1;Name=WP_221068401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195202.1;locus_tag=VA249_RS00025;product=Hsp20 family protein;protein_id=WP_221068401.1;transl_table=11 NZ_AP024165.1 RefSeq gene 7178 8431 . - . ID=gene-VA249_RS00030;Name=VA249_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00030;old_locus_tag=VYA_00060 NZ_AP024165.1 Protein Homology CDS 7178 8431 . - 0 ID=cds-WP_221068402.1;Parent=gene-VA249_RS00030;Dbxref=Genbank:WP_221068402.1;Name=WP_221068402.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126669.1;locus_tag=VA249_RS00030;product=valine--pyruvate transaminase;protein_id=WP_221068402.1;transl_table=11 NZ_AP024165.1 RefSeq gene 8747 8965 . + . ID=gene-VA249_RS00035;Name=VA249_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00035;old_locus_tag=VYA_00070 NZ_AP024165.1 Protein Homology CDS 8747 8965 . + 0 ID=cds-WP_221068403.1;Parent=gene-VA249_RS00035;Dbxref=Genbank:WP_221068403.1;Name=WP_221068403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012551717.1;locus_tag=VA249_RS00035;product=Flp family type IVb pilin;protein_id=WP_221068403.1;transl_table=11 NZ_AP024165.1 RefSeq gene 8968 9405 . + . ID=gene-VA249_RS00040;Name=VA249_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00040;old_locus_tag=VYA_00080 NZ_AP024165.1 Protein Homology CDS 8968 9405 . + 0 ID=cds-WP_221068404.1;Parent=gene-VA249_RS00040;Dbxref=Genbank:WP_221068404.1;Name=WP_221068404.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017099669.1;locus_tag=VA249_RS00040;product=prepilin peptidase;protein_id=WP_221068404.1;transl_table=11 NZ_AP024165.1 RefSeq gene 9414 10202 . + . ID=gene-VA249_RS00045;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=VA249_RS00045;old_locus_tag=VYA_00090 NZ_AP024165.1 Protein Homology CDS 9414 10202 . + 0 ID=cds-WP_221068405.1;Parent=gene-VA249_RS00045;Dbxref=Genbank:WP_221068405.1;Name=WP_221068405.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009708044.1;locus_tag=VA249_RS00045;product=Flp pilus assembly protein CpaB;protein_id=WP_221068405.1;transl_table=11 NZ_AP024165.1 RefSeq gene 10211 11542 . + . ID=gene-VA249_RS00050;Name=VA249_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00050;old_locus_tag=VYA_00100 NZ_AP024165.1 Protein Homology CDS 10211 11542 . + 0 ID=cds-WP_221068406.1;Parent=gene-VA249_RS00050;Dbxref=Genbank:WP_221068406.1;Name=WP_221068406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848145.1;locus_tag=VA249_RS00050;product=pilus assembly protein N-terminal domain-containing protein;protein_id=WP_221068406.1;transl_table=11 NZ_AP024165.1 RefSeq gene 11539 12009 . + . ID=gene-VA249_RS00055;Name=VA249_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00055;old_locus_tag=VYA_00110 NZ_AP024165.1 GeneMarkS-2+ CDS 11539 12009 . + 0 ID=cds-WP_221068407.1;Parent=gene-VA249_RS00055;Dbxref=Genbank:WP_221068407.1;Name=WP_221068407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS00055;product=hypothetical protein;protein_id=WP_221068407.1;transl_table=11 NZ_AP024165.1 RefSeq gene 12032 13252 . + . ID=gene-VA249_RS00060;Name=VA249_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00060;old_locus_tag=VYA_00120 NZ_AP024165.1 Protein Homology CDS 12032 13252 . + 0 ID=cds-WP_221068408.1;Parent=gene-VA249_RS00060;Dbxref=Genbank:WP_221068408.1;Name=WP_221068408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848147.1;locus_tag=VA249_RS00060;product=ATPase;protein_id=WP_221068408.1;transl_table=11 NZ_AP024165.1 RefSeq gene 13262 14545 . + . ID=gene-VA249_RS00065;Name=VA249_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00065;old_locus_tag=VYA_00130 NZ_AP024165.1 Protein Homology CDS 13262 14545 . + 0 ID=cds-WP_221068409.1;Parent=gene-VA249_RS00065;Dbxref=Genbank:WP_221068409.1;Name=WP_221068409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848148.1;locus_tag=VA249_RS00065;product=CpaF family protein;protein_id=WP_221068409.1;transl_table=11 NZ_AP024165.1 RefSeq gene 14556 15473 . + . ID=gene-VA249_RS00070;Name=VA249_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00070;old_locus_tag=VYA_00140 NZ_AP024165.1 Protein Homology CDS 14556 15473 . + 0 ID=cds-WP_221069748.1;Parent=gene-VA249_RS00070;Dbxref=Genbank:WP_221069748.1;Name=WP_221069748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017099665.1;locus_tag=VA249_RS00070;product=type II secretion system F family protein;protein_id=WP_221069748.1;transl_table=11 NZ_AP024165.1 RefSeq gene 15473 16360 . + . ID=gene-VA249_RS00075;Name=VA249_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00075;old_locus_tag=VYA_00150 NZ_AP024165.1 Protein Homology CDS 15473 16360 . + 0 ID=cds-WP_221068410.1;Parent=gene-VA249_RS00075;Dbxref=Genbank:WP_221068410.1;Name=WP_221068410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009708050.1;locus_tag=VA249_RS00075;product=type II secretion system F family protein;protein_id=WP_221068410.1;transl_table=11 NZ_AP024165.1 RefSeq gene 16353 17117 . + . ID=gene-VA249_RS00080;Name=VA249_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00080;old_locus_tag=VYA_00160 NZ_AP024165.1 Protein Homology CDS 16353 17117 . + 0 ID=cds-WP_221068411.1;Parent=gene-VA249_RS00080;Dbxref=Genbank:WP_221068411.1;Name=WP_221068411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009708051.1;locus_tag=VA249_RS00080;product=secretion protein;protein_id=WP_221068411.1;transl_table=11 NZ_AP024165.1 RefSeq gene 17107 17595 . + . ID=gene-VA249_RS00085;Name=VA249_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00085;old_locus_tag=VYA_00170 NZ_AP024165.1 Protein Homology CDS 17107 17595 . + 0 ID=cds-WP_221068412.1;Parent=gene-VA249_RS00085;Dbxref=Genbank:WP_221068412.1;Name=WP_221068412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848152.1;locus_tag=VA249_RS00085;product=pilus assembly protein;protein_id=WP_221068412.1;transl_table=11 NZ_AP024165.1 RefSeq gene 17570 18130 . + . ID=gene-VA249_RS00090;Name=VA249_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00090;old_locus_tag=VYA_00180 NZ_AP024165.1 Protein Homology CDS 17570 18130 . + 0 ID=cds-WP_221068413.1;Parent=gene-VA249_RS00090;Dbxref=Genbank:WP_221068413.1;Name=WP_221068413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011261287.1;locus_tag=VA249_RS00090;product=ATP-binding protein;protein_id=WP_221068413.1;transl_table=11 NZ_AP024165.1 RefSeq gene 18133 19443 . + . ID=gene-VA249_RS00095;Name=VA249_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00095;old_locus_tag=VYA_00190 NZ_AP024165.1 Protein Homology CDS 18133 19443 . + 0 ID=cds-WP_221068414.1;Parent=gene-VA249_RS00095;Dbxref=Genbank:WP_221068414.1;Name=WP_221068414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848154.1;locus_tag=VA249_RS00095;product=pilus assembly protein TadG-related protein;protein_id=WP_221068414.1;transl_table=11 NZ_AP024165.1 RefSeq gene 19455 20090 . + . ID=gene-VA249_RS00100;Name=VA249_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00100;old_locus_tag=VYA_00200 NZ_AP024165.1 Protein Homology CDS 19455 20090 . + 0 ID=cds-WP_221068415.1;Parent=gene-VA249_RS00100;Dbxref=Genbank:WP_221068415.1;Name=WP_221068415.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=VA249_RS00100;product=OmpA family protein;protein_id=WP_221068415.1;transl_table=11 NZ_AP024165.1 RefSeq gene 20087 21469 . - . ID=gene-VA249_RS00105;Name=VA249_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00105;old_locus_tag=VYA_00210 NZ_AP024165.1 Protein Homology CDS 20087 21469 . - 0 ID=cds-WP_221068416.1;Parent=gene-VA249_RS00105;Dbxref=Genbank:WP_221068416.1;Name=WP_221068416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009708056.1;locus_tag=VA249_RS00105;product=ATP-binding protein;protein_id=WP_221068416.1;transl_table=11 NZ_AP024165.1 RefSeq gene 21475 22155 . - . ID=gene-VA249_RS00110;Name=VA249_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00110;old_locus_tag=VYA_00220 NZ_AP024165.1 Protein Homology CDS 21475 22155 . - 0 ID=cds-WP_221068417.1;Parent=gene-VA249_RS00110;Dbxref=Genbank:WP_221068417.1;Name=WP_221068417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848157.1;locus_tag=VA249_RS00110;product=response regulator transcription factor;protein_id=WP_221068417.1;transl_table=11 NZ_AP024165.1 RefSeq gene 22258 24339 . - . ID=gene-VA249_RS00115;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=VA249_RS00115;old_locus_tag=VYA_00230 NZ_AP024165.1 Protein Homology CDS 22258 24339 . - 0 ID=cds-WP_221068418.1;Parent=gene-VA249_RS00115;Dbxref=Genbank:WP_221068418.1;Name=WP_221068418.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040221.1;locus_tag=VA249_RS00115;product=glycine--tRNA ligase subunit beta;protein_id=WP_221068418.1;transl_table=11 NZ_AP024165.1 RefSeq gene 24354 25271 . - . ID=gene-VA249_RS00120;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=VA249_RS00120;old_locus_tag=VYA_00240 NZ_AP024165.1 Protein Homology CDS 24354 25271 . - 0 ID=cds-WP_221068419.1;Parent=gene-VA249_RS00120;Dbxref=Genbank:WP_221068419.1;Name=WP_221068419.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743179.1;locus_tag=VA249_RS00120;product=glycine--tRNA ligase subunit alpha;protein_id=WP_221068419.1;transl_table=11 NZ_AP024165.1 RefSeq gene 25761 26315 . + . ID=gene-VA249_RS00125;Name=VA249_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00125;old_locus_tag=VYA_00250 NZ_AP024165.1 Protein Homology CDS 25761 26315 . + 0 ID=cds-WP_221068420.1;Parent=gene-VA249_RS00125;Dbxref=Genbank:WP_221068420.1;Name=WP_221068420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818157.1;locus_tag=VA249_RS00125;product=TMEM165/GDT1 family protein;protein_id=WP_221068420.1;transl_table=11 NZ_AP024165.1 RefSeq gene 26476 26736 . + . ID=gene-VA249_RS00130;Name=VA249_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00130;old_locus_tag=VYA_00260 NZ_AP024165.1 Protein Homology CDS 26476 26736 . + 0 ID=cds-WP_221068421.1;Parent=gene-VA249_RS00130;Dbxref=Genbank:WP_221068421.1;Name=WP_221068421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230433.1;locus_tag=VA249_RS00130;product=hypothetical protein;protein_id=WP_221068421.1;transl_table=11 NZ_AP024165.1 RefSeq gene 26781 27029 . - . ID=gene-VA249_RS00135;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=VA249_RS00135;old_locus_tag=VYA_00270 NZ_AP024165.1 Protein Homology CDS 26781 27029 . - 0 ID=cds-WP_211915663.1;Parent=gene-VA249_RS00135;Dbxref=Genbank:WP_211915663.1;Name=WP_211915663.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394130.1;locus_tag=VA249_RS00135;product=sulfurtransferase TusA;protein_id=WP_211915663.1;transl_table=11 NZ_AP024165.1 RefSeq gene 27162 27344 . + . ID=gene-VA249_RS00140;Name=VA249_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00140;old_locus_tag=VYA_00280 NZ_AP024165.1 Protein Homology CDS 27162 27344 . + 0 ID=cds-WP_038870247.1;Parent=gene-VA249_RS00140;Dbxref=Genbank:WP_038870247.1;Name=WP_038870247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444806.1;locus_tag=VA249_RS00140;product=hypothetical protein;protein_id=WP_038870247.1;transl_table=11 NZ_AP024165.1 RefSeq gene 27513 28454 . + . ID=gene-VA249_RS00145;Name=VA249_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00145;old_locus_tag=VYA_00290 NZ_AP024165.1 Protein Homology CDS 27513 28454 . + 0 ID=cds-WP_221068422.1;Parent=gene-VA249_RS00145;Dbxref=Genbank:WP_221068422.1;Name=WP_221068422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458693.1;locus_tag=VA249_RS00145;product=LysR family transcriptional regulator;protein_id=WP_221068422.1;transl_table=11 NZ_AP024165.1 RefSeq gene 28505 29503 . - . ID=gene-VA249_RS00150;Name=VA249_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00150;old_locus_tag=VYA_00300 NZ_AP024165.1 Protein Homology CDS 28505 29503 . - 0 ID=cds-WP_221068423.1;Parent=gene-VA249_RS00150;Dbxref=Genbank:WP_221068423.1;Name=WP_221068423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010648493.1;locus_tag=VA249_RS00150;product=oxidoreductase;protein_id=WP_221068423.1;transl_table=11 NZ_AP024165.1 RefSeq gene 29761 30936 . - . ID=gene-VA249_RS00155;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=VA249_RS00155;old_locus_tag=VYA_00310 NZ_AP024165.1 Protein Homology CDS 29761 30936 . - 0 ID=cds-WP_221068424.1;Parent=gene-VA249_RS00155;Dbxref=Genbank:WP_221068424.1;Name=WP_221068424.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635587.1;locus_tag=VA249_RS00155;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_221068424.1;transl_table=11 NZ_AP024165.1 RefSeq gene 30951 33152 . - . ID=gene-VA249_RS00160;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=VA249_RS00160;old_locus_tag=VYA_00320 NZ_AP024165.1 Protein Homology CDS 30951 33152 . - 0 ID=cds-WP_221068425.1;Parent=gene-VA249_RS00160;Dbxref=Genbank:WP_221068425.1;Name=WP_221068425.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230439.1;locus_tag=VA249_RS00160;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_221068425.1;transl_table=11 NZ_AP024165.1 RefSeq gene 33421 34044 . + . ID=gene-VA249_RS00165;Name=VA249_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00165;old_locus_tag=VYA_00330 NZ_AP024165.1 Protein Homology CDS 33421 34044 . + 0 ID=cds-WP_221068426.1;Parent=gene-VA249_RS00165;Dbxref=Genbank:WP_221068426.1;Name=WP_221068426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378891.1;locus_tag=VA249_RS00165;product=YigZ family protein;protein_id=WP_221068426.1;transl_table=11 NZ_AP024165.1 RefSeq gene 34091 35548 . + . ID=gene-VA249_RS00170;Name=VA249_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00170;old_locus_tag=VYA_00340 NZ_AP024165.1 Protein Homology CDS 34091 35548 . + 0 ID=cds-WP_221068427.1;Parent=gene-VA249_RS00170;Dbxref=Genbank:WP_221068427.1;Name=WP_221068427.1;Ontology_term=GO:0015379,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=potassium:chloride symporter activity|0015379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736668.1;locus_tag=VA249_RS00170;product=TrkH family potassium uptake protein;protein_id=WP_221068427.1;transl_table=11 NZ_AP024165.1 RefSeq gene 35558 36085 . + . ID=gene-VA249_RS00175;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=VA249_RS00175;old_locus_tag=VYA_00350 NZ_AP024165.1 Protein Homology CDS 35558 36085 . + 0 ID=cds-WP_221068428.1;Parent=gene-VA249_RS00175;Dbxref=Genbank:WP_221068428.1;Name=WP_221068428.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736667.1;locus_tag=VA249_RS00175;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_221068428.1;transl_table=11 NZ_AP024165.1 RefSeq gene 36588 38142 . + . ID=gene-VA249_RS00180;Name=VA249_RS00180;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS00180;old_locus_tag=VYA_r00010 NZ_AP024165.1 cmsearch rRNA 36588 38142 . + . ID=rna-VA249_RS00180;Parent=gene-VA249_RS00180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS00180;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 36588 38142 . + . ID=exon-VA249_RS00180-1;Parent=rna-VA249_RS00180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS00180;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 38233 38308 . + . ID=gene-VA249_RS00185;Name=VA249_RS00185;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00185;old_locus_tag=VYA_t00010 NZ_AP024165.1 tRNAscan-SE tRNA 38233 38308 . + . ID=rna-VA249_RS00185;Parent=gene-VA249_RS00185;anticodon=(pos:38267..38269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00185;product=tRNA-Glu NZ_AP024165.1 tRNAscan-SE exon 38233 38308 . + . ID=exon-VA249_RS00185-1;Parent=rna-VA249_RS00185;anticodon=(pos:38267..38269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00185;product=tRNA-Glu NZ_AP024165.1 RefSeq gene 38311 38386 . + . ID=gene-VA249_RS00190;Name=VA249_RS00190;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00190;old_locus_tag=VYA_t00020 NZ_AP024165.1 tRNAscan-SE tRNA 38311 38386 . + . ID=rna-VA249_RS00190;Parent=gene-VA249_RS00190;anticodon=(pos:38344..38346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00190;product=tRNA-Lys NZ_AP024165.1 tRNAscan-SE exon 38311 38386 . + . ID=exon-VA249_RS00190-1;Parent=rna-VA249_RS00190;anticodon=(pos:38344..38346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00190;product=tRNA-Lys NZ_AP024165.1 RefSeq gene 38415 38490 . + . ID=gene-VA249_RS00195;Name=VA249_RS00195;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00195;old_locus_tag=VYA_t00030 NZ_AP024165.1 tRNAscan-SE tRNA 38415 38490 . + . ID=rna-VA249_RS00195;Parent=gene-VA249_RS00195;anticodon=(pos:38448..38450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00195;product=tRNA-Ala NZ_AP024165.1 tRNAscan-SE exon 38415 38490 . + . ID=exon-VA249_RS00195-1;Parent=rna-VA249_RS00195;anticodon=(pos:38448..38450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00195;product=tRNA-Ala NZ_AP024165.1 RefSeq gene 38526 38601 . + . ID=gene-VA249_RS00200;Name=VA249_RS00200;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00200;old_locus_tag=VYA_t00040 NZ_AP024165.1 tRNAscan-SE tRNA 38526 38601 . + . ID=rna-VA249_RS00200;Parent=gene-VA249_RS00200;anticodon=(pos:38559..38561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00200;product=tRNA-Val NZ_AP024165.1 tRNAscan-SE exon 38526 38601 . + . ID=exon-VA249_RS00200-1;Parent=rna-VA249_RS00200;anticodon=(pos:38559..38561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00200;product=tRNA-Val NZ_AP024165.1 RefSeq gene 38930 41822 . + . ID=gene-VA249_RS00205;Name=VA249_RS00205;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS00205;old_locus_tag=VYA_r00020 NZ_AP024165.1 cmsearch rRNA 38930 41822 . + . ID=rna-VA249_RS00205;Parent=gene-VA249_RS00205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS00205;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 38930 41822 . + . ID=exon-VA249_RS00205-1;Parent=rna-VA249_RS00205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS00205;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 41915 42031 . + . ID=gene-VA249_RS00210;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS00210;old_locus_tag=VYA_r00030 NZ_AP024165.1 cmsearch rRNA 41915 42031 . + . ID=rna-VA249_RS00210;Parent=gene-VA249_RS00210;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS00210;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 41915 42031 . + . ID=exon-VA249_RS00210-1;Parent=rna-VA249_RS00210;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS00210;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 42097 42173 . + . ID=gene-VA249_RS00215;Name=VA249_RS00215;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00215;old_locus_tag=VYA_t00050 NZ_AP024165.1 tRNAscan-SE tRNA 42097 42173 . + . ID=rna-VA249_RS00215;Parent=gene-VA249_RS00215;anticodon=(pos:42131..42133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00215;product=tRNA-Asp NZ_AP024165.1 tRNAscan-SE exon 42097 42173 . + . ID=exon-VA249_RS00215-1;Parent=rna-VA249_RS00215;anticodon=(pos:42131..42133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00215;product=tRNA-Asp NZ_AP024165.1 RefSeq gene 42334 43224 . - . ID=gene-VA249_RS00220;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=VA249_RS00220;old_locus_tag=VYA_00360 NZ_AP024165.1 Protein Homology CDS 42334 43224 . - 0 ID=cds-WP_221068429.1;Parent=gene-VA249_RS00220;Dbxref=Genbank:WP_221068429.1;Name=WP_221068429.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444829.1;locus_tag=VA249_RS00220;product=HTH-type transcriptional activator IlvY;protein_id=WP_221068429.1;transl_table=11 NZ_AP024165.1 RefSeq gene 43367 44851 . + . ID=gene-VA249_RS00225;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=VA249_RS00225;old_locus_tag=VYA_00370 NZ_AP024165.1 Protein Homology CDS 43367 44851 . + 0 ID=cds-WP_221068430.1;Parent=gene-VA249_RS00225;Dbxref=Genbank:WP_221068430.1;Name=WP_221068430.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079096.1;locus_tag=VA249_RS00225;product=ketol-acid reductoisomerase;protein_id=WP_221068430.1;transl_table=11 NZ_AP024165.1 RefSeq gene 45195 45446 . - . ID=gene-VA249_RS00230;Name=VA249_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00230;old_locus_tag=VYA_00380 NZ_AP024165.1 Protein Homology CDS 45195 45446 . - 0 ID=cds-WP_128812156.1;Parent=gene-VA249_RS00230;Dbxref=Genbank:WP_128812156.1;Name=WP_128812156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230445.1;locus_tag=VA249_RS00230;product=accessory factor UbiK family protein;protein_id=WP_128812156.1;transl_table=11 NZ_AP024165.1 RefSeq gene 45578 48700 . - . ID=gene-VA249_RS00235;Name=vmeD;gbkey=Gene;gene=vmeD;gene_biotype=protein_coding;locus_tag=VA249_RS00235;old_locus_tag=VYA_00390 NZ_AP024165.1 Protein Homology CDS 45578 48700 . - 0 ID=cds-WP_128812154.1;Parent=gene-VA249_RS00235;Dbxref=Genbank:WP_128812154.1;Name=WP_128812154.1;gbkey=CDS;gene=vmeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478703.1;locus_tag=VA249_RS00235;product=multidrug efflux RND transporter permease subunit VmeD;protein_id=WP_128812154.1;transl_table=11 NZ_AP024165.1 RefSeq gene 48712 49818 . - . ID=gene-VA249_RS00240;Name=vmeC;gbkey=Gene;gene=vmeC;gene_biotype=protein_coding;locus_tag=VA249_RS00240;old_locus_tag=VYA_00400 NZ_AP024165.1 Protein Homology CDS 48712 49818 . - 0 ID=cds-WP_221068431.1;Parent=gene-VA249_RS00240;Dbxref=Genbank:WP_221068431.1;Name=WP_221068431.1;gbkey=CDS;gene=vmeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455175.1;locus_tag=VA249_RS00240;product=multidrug efflux RND transporter periplasmic adaptor subunit VmeC;protein_id=WP_221068431.1;transl_table=11 NZ_AP024165.1 RefSeq gene 49837 50418 . - . ID=gene-VA249_RS00245;Name=VA249_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00245;old_locus_tag=VYA_00410 NZ_AP024165.1 Protein Homology CDS 49837 50418 . - 0 ID=cds-WP_128812150.1;Parent=gene-VA249_RS00245;Dbxref=Genbank:WP_128812150.1;Name=WP_128812150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427239.1;locus_tag=VA249_RS00245;product=TetR/AcrR family transcriptional regulator;protein_id=WP_128812150.1;transl_table=11 NZ_AP024165.1 RefSeq gene 50587 52602 . + . ID=gene-VA249_RS00250;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=VA249_RS00250;old_locus_tag=VYA_00420 NZ_AP024165.1 Protein Homology CDS 50587 52602 . + 0 ID=cds-WP_221068432.1;Parent=gene-VA249_RS00250;Dbxref=Genbank:WP_221068432.1;Name=WP_221068432.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005524938.1;locus_tag=VA249_RS00250;product=DNA helicase Rep;protein_id=WP_221068432.1;transl_table=11 NZ_AP024165.1 RefSeq gene 52682 53095 . - . ID=gene-VA249_RS00255;Name=VA249_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00255;old_locus_tag=VYA_00430 NZ_AP024165.1 Protein Homology CDS 52682 53095 . - 0 ID=cds-WP_128812146.1;Parent=gene-VA249_RS00255;Dbxref=Genbank:WP_128812146.1;Name=WP_128812146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841248.1;locus_tag=VA249_RS00255;product=cytochrome c5 family protein;protein_id=WP_128812146.1;transl_table=11 NZ_AP024165.1 RefSeq gene 53457 53533 . + . ID=gene-VA249_RS00260;Name=VA249_RS00260;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00260;old_locus_tag=VYA_t00060 NZ_AP024165.1 tRNAscan-SE tRNA 53457 53533 . + . ID=rna-VA249_RS00260;Parent=gene-VA249_RS00260;anticodon=(pos:53491..53493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00260;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 53457 53533 . + . ID=exon-VA249_RS00260-1;Parent=rna-VA249_RS00260;anticodon=(pos:53491..53493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00260;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 53568 53643 . + . ID=gene-VA249_RS00265;Name=VA249_RS00265;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00265;old_locus_tag=VYA_t00070 NZ_AP024165.1 tRNAscan-SE tRNA 53568 53643 . + . ID=rna-VA249_RS00265;Parent=gene-VA249_RS00265;anticodon=(pos:53601..53603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00265;product=tRNA-His NZ_AP024165.1 tRNAscan-SE exon 53568 53643 . + . ID=exon-VA249_RS00265-1;Parent=rna-VA249_RS00265;anticodon=(pos:53601..53603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00265;product=tRNA-His NZ_AP024165.1 RefSeq gene 53716 53792 . + . ID=gene-VA249_RS00270;Name=VA249_RS00270;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00270;old_locus_tag=VYA_t00080 NZ_AP024165.1 tRNAscan-SE tRNA 53716 53792 . + . ID=rna-VA249_RS00270;Parent=gene-VA249_RS00270;anticodon=(pos:53750..53752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00270;product=tRNA-Pro NZ_AP024165.1 tRNAscan-SE exon 53716 53792 . + . ID=exon-VA249_RS00270-1;Parent=rna-VA249_RS00270;anticodon=(pos:53750..53752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00270;product=tRNA-Pro NZ_AP024165.1 RefSeq gene 53840 53915 . + . ID=gene-VA249_RS00275;Name=VA249_RS00275;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00275;old_locus_tag=VYA_t00090 NZ_AP024165.1 tRNAscan-SE tRNA 53840 53915 . + . ID=rna-VA249_RS00275;Parent=gene-VA249_RS00275;anticodon=(pos:53873..53875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00275;product=tRNA-His NZ_AP024165.1 tRNAscan-SE exon 53840 53915 . + . ID=exon-VA249_RS00275-1;Parent=rna-VA249_RS00275;anticodon=(pos:53873..53875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00275;product=tRNA-His NZ_AP024165.1 RefSeq gene 53940 54016 . + . ID=gene-VA249_RS00280;Name=VA249_RS00280;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS00280;old_locus_tag=VYA_t00100 NZ_AP024165.1 tRNAscan-SE tRNA 53940 54016 . + . ID=rna-VA249_RS00280;Parent=gene-VA249_RS00280;anticodon=(pos:53974..53976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00280;product=tRNA-Pro NZ_AP024165.1 tRNAscan-SE exon 53940 54016 . + . ID=exon-VA249_RS00280-1;Parent=rna-VA249_RS00280;anticodon=(pos:53974..53976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS00280;product=tRNA-Pro NZ_AP024165.1 RefSeq gene 54499 55224 . - . ID=gene-VA249_RS00285;Name=VA249_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00285;old_locus_tag=VYA_00440 NZ_AP024165.1 Protein Homology CDS 54499 55224 . - 0 ID=cds-WP_221068433.1;Parent=gene-VA249_RS00285;Dbxref=Genbank:WP_221068433.1;Name=WP_221068433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650405.1;locus_tag=VA249_RS00285;product=HAD family hydrolase;protein_id=WP_221068433.1;transl_table=11 NZ_AP024165.1 RefSeq gene 55901 57616 . + . ID=gene-VA249_RS00290;Name=VA249_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00290;old_locus_tag=VYA_00450 NZ_AP024165.1 Protein Homology CDS 55901 57616 . + 0 ID=cds-WP_221068434.1;Parent=gene-VA249_RS00290;Dbxref=Genbank:WP_221068434.1;Name=WP_221068434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196662.1;locus_tag=VA249_RS00290;product=ABC transporter ATP-binding protein;protein_id=WP_221068434.1;transl_table=11 NZ_AP024165.1 RefSeq gene 57722 59275 . + . ID=gene-VA249_RS00295;Name=VA249_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00295;old_locus_tag=VYA_00460 NZ_AP024165.1 Protein Homology CDS 57722 59275 . + 0 ID=cds-WP_221068435.1;Parent=gene-VA249_RS00295;Dbxref=Genbank:WP_221068435.1;Name=WP_221068435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017631993.1;locus_tag=VA249_RS00295;product=ABC transporter substrate-binding protein;protein_id=WP_221068435.1;transl_table=11 NZ_AP024165.1 RefSeq gene 59422 60399 . + . ID=gene-VA249_RS00300;Name=VA249_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00300;old_locus_tag=VYA_00470 NZ_AP024165.1 Protein Homology CDS 59422 60399 . + 0 ID=cds-WP_128812138.1;Parent=gene-VA249_RS00300;Dbxref=Genbank:WP_128812138.1;Name=WP_128812138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196664.1;locus_tag=VA249_RS00300;product=ABC transporter permease;protein_id=WP_128812138.1;transl_table=11 NZ_AP024165.1 RefSeq gene 60402 61358 . + . ID=gene-VA249_RS00305;Name=VA249_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00305;old_locus_tag=VYA_00480 NZ_AP024165.1 Protein Homology CDS 60402 61358 . + 0 ID=cds-WP_128812136.1;Parent=gene-VA249_RS00305;Dbxref=Genbank:WP_128812136.1;Name=WP_128812136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713379.1;locus_tag=VA249_RS00305;product=ABC transporter permease;protein_id=WP_128812136.1;transl_table=11 NZ_AP024165.1 RefSeq gene 61516 62463 . + . ID=gene-VA249_RS00310;Name=VA249_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00310;old_locus_tag=VYA_00490 NZ_AP024165.1 Protein Homology CDS 61516 62463 . + 0 ID=cds-WP_221068436.1;Parent=gene-VA249_RS00310;Dbxref=Genbank:WP_221068436.1;Name=WP_221068436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705436.1;locus_tag=VA249_RS00310;product=SPOR domain-containing protein;protein_id=WP_221068436.1;transl_table=11 NZ_AP024165.1 RefSeq gene 62552 65251 . - . ID=gene-VA249_RS00315;Name=VA249_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00315;old_locus_tag=VYA_00500 NZ_AP024165.1 Protein Homology CDS 62552 65251 . - 0 ID=cds-WP_225927092.1;Parent=gene-VA249_RS00315;Dbxref=Genbank:WP_225927092.1;Name=WP_225927092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817149.1;locus_tag=VA249_RS00315;product=hypothetical protein;protein_id=WP_225927092.1;transl_table=11 NZ_AP024165.1 RefSeq gene 65508 67055 . - . ID=gene-VA249_RS00320;Name=VA249_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00320;old_locus_tag=VYA_00510 NZ_AP024165.1 Protein Homology CDS 65508 67055 . - 0 ID=cds-WP_221068437.1;Parent=gene-VA249_RS00320;Dbxref=Genbank:WP_221068437.1;Name=WP_221068437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449356.1;locus_tag=VA249_RS00320;product=hypothetical protein;protein_id=WP_221068437.1;transl_table=11 NZ_AP024165.1 RefSeq gene 67059 67631 . - . ID=gene-VA249_RS00325;Name=VA249_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00325;old_locus_tag=VYA_00520 NZ_AP024165.1 Protein Homology CDS 67059 67631 . - 0 ID=cds-WP_128812128.1;Parent=gene-VA249_RS00325;Dbxref=Genbank:WP_128812128.1;Name=WP_128812128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533505.1;locus_tag=VA249_RS00325;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_128812128.1;transl_table=11 NZ_AP024165.1 RefSeq gene 67634 69100 . - . ID=gene-VA249_RS00330;Name=VA249_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00330;old_locus_tag=VYA_00530 NZ_AP024165.1 Protein Homology CDS 67634 69100 . - 0 ID=cds-WP_221068438.1;Parent=gene-VA249_RS00330;Dbxref=Genbank:WP_221068438.1;Name=WP_221068438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196669.1;locus_tag=VA249_RS00330;product=chromosome partitioning protein ParA;protein_id=WP_221068438.1;transl_table=11 NZ_AP024165.1 RefSeq gene 69115 70467 . - . ID=gene-VA249_RS00335;Name=VA249_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00335;old_locus_tag=VYA_00540 NZ_AP024165.1 Protein Homology CDS 69115 70467 . - 0 ID=cds-WP_221068439.1;Parent=gene-VA249_RS00335;Dbxref=Genbank:WP_221068439.1;Name=WP_221068439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196670.1;locus_tag=VA249_RS00335;product=serine/threonine protein kinase;protein_id=WP_221068439.1;transl_table=11 NZ_AP024165.1 RefSeq gene 70674 71681 . + . ID=gene-VA249_RS00340;Name=VA249_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00340;old_locus_tag=VYA_00550 NZ_AP024165.1 Protein Homology CDS 70674 71681 . + 0 ID=cds-WP_221068440.1;Parent=gene-VA249_RS00340;Dbxref=Genbank:WP_221068440.1;Name=WP_221068440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636149.1;locus_tag=VA249_RS00340;product=substrate-binding domain-containing protein;protein_id=WP_221068440.1;transl_table=11 NZ_AP024165.1 RefSeq gene 71740 72666 . + . ID=gene-VA249_RS00345;Name=VA249_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00345;old_locus_tag=VYA_00560 NZ_AP024165.1 Protein Homology CDS 71740 72666 . + 0 ID=cds-WP_221068441.1;Parent=gene-VA249_RS00345;Dbxref=Genbank:WP_221068441.1;Name=WP_221068441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009699062.1;locus_tag=VA249_RS00345;product=LysR family transcriptional regulator;protein_id=WP_221068441.1;transl_table=11 NZ_AP024165.1 RefSeq gene 72869 73246 . + . ID=gene-VA249_RS00350;Name=VA249_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00350;old_locus_tag=VYA_00570 NZ_AP024165.1 Protein Homology CDS 72869 73246 . + 0 ID=cds-WP_221068442.1;Parent=gene-VA249_RS00350;Dbxref=Genbank:WP_221068442.1;Name=WP_221068442.1;Ontology_term=GO:0022857,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705444.1;locus_tag=VA249_RS00350;product=SMR family transporter;protein_id=WP_221068442.1;transl_table=11 NZ_AP024165.1 RefSeq gene 73249 73578 . + . ID=gene-VA249_RS00355;Name=VA249_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00355;old_locus_tag=VYA_00580 NZ_AP024165.1 Protein Homology CDS 73249 73578 . + 0 ID=cds-WP_221068443.1;Parent=gene-VA249_RS00355;Dbxref=Genbank:WP_221068443.1;Name=WP_221068443.1;Ontology_term=GO:0022857,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379137.1;locus_tag=VA249_RS00355;product=SMR family transporter;protein_id=WP_221068443.1;transl_table=11 NZ_AP024165.1 RefSeq gene 73756 75552 . - . ID=gene-VA249_RS00360;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=VA249_RS00360;old_locus_tag=VYA_00590 NZ_AP024165.1 Protein Homology CDS 73756 75552 . - 0 ID=cds-WP_221068444.1;Parent=gene-VA249_RS00360;Dbxref=Genbank:WP_221068444.1;Name=WP_221068444.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296048.1;locus_tag=VA249_RS00360;product=phosphogluconate dehydratase;protein_id=WP_221068444.1;transl_table=11 NZ_AP024165.1 RefSeq gene 75549 76070 . - . ID=gene-VA249_RS00365;Name=VA249_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00365;old_locus_tag=VYA_00600 NZ_AP024165.1 Protein Homology CDS 75549 76070 . - 0 ID=cds-WP_221068445.1;Parent=gene-VA249_RS00365;Dbxref=Genbank:WP_221068445.1;Name=WP_221068445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429966.1;locus_tag=VA249_RS00365;product=gluconokinase;protein_id=WP_221068445.1;transl_table=11 NZ_AP024165.1 RefSeq gene 76223 77599 . + . ID=gene-VA249_RS00370;Name=VA249_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00370;old_locus_tag=VYA_00610 NZ_AP024165.1 Protein Homology CDS 76223 77599 . + 0 ID=cds-WP_221068446.1;Parent=gene-VA249_RS00370;Dbxref=Genbank:WP_221068446.1;Name=WP_221068446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126707.1;locus_tag=VA249_RS00370;product=GntP family permease;protein_id=WP_221068446.1;transl_table=11 NZ_AP024165.1 RefSeq gene 77609 78220 . + . ID=gene-VA249_RS00375;Name=VA249_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00375;old_locus_tag=VYA_00620 NZ_AP024165.1 Protein Homology CDS 77609 78220 . + 0 ID=cds-WP_128812108.1;Parent=gene-VA249_RS00375;Dbxref=Genbank:WP_128812108.1;Name=WP_128812108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196675.1;locus_tag=VA249_RS00375;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_128812108.1;transl_table=11 NZ_AP024165.1 RefSeq gene 78710 79084 . - . ID=gene-VA249_RS00380;Name=VA249_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00380;old_locus_tag=VYA_00630 NZ_AP024165.1 Protein Homology CDS 78710 79084 . - 0 ID=cds-WP_072610207.1;Parent=gene-VA249_RS00380;Dbxref=Genbank:WP_072610207.1;Name=WP_072610207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005594532.1;locus_tag=VA249_RS00380;product=RidA family protein;protein_id=WP_072610207.1;transl_table=11 NZ_AP024165.1 RefSeq gene 79132 80322 . - . ID=gene-VA249_RS00385;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=VA249_RS00385;old_locus_tag=VYA_00640 NZ_AP024165.1 Protein Homology CDS 79132 80322 . - 0 ID=cds-WP_221068447.1;Parent=gene-VA249_RS00385;Dbxref=Genbank:WP_221068447.1;Name=WP_221068447.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=cellular amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017015198.1;locus_tag=VA249_RS00385;product=cystathionine beta-lyase;protein_id=WP_221068447.1;transl_table=11 NZ_AP024165.1 RefSeq gene 80334 81569 . - . ID=gene-VA249_RS00390;Name=VA249_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00390;old_locus_tag=VYA_00650 NZ_AP024165.1 Protein Homology CDS 80334 81569 . - 0 ID=cds-WP_211915633.1;Parent=gene-VA249_RS00390;Dbxref=Genbank:WP_211915633.1;Name=WP_211915633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713387.1;locus_tag=VA249_RS00390;product=cation:dicarboxylase symporter family transporter;protein_id=WP_211915633.1;transl_table=11 NZ_AP024165.1 RefSeq gene 81772 82401 . + . ID=gene-VA249_RS00395;Name=VA249_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00395;old_locus_tag=VYA_00660 NZ_AP024165.1 Protein Homology CDS 81772 82401 . + 0 ID=cds-WP_080535477.1;Parent=gene-VA249_RS00395;Dbxref=Genbank:WP_080535477.1;Name=WP_080535477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713388.1;locus_tag=VA249_RS00395;product=PAS domain-containing protein;protein_id=WP_080535477.1;transl_table=11 NZ_AP024165.1 RefSeq gene 82526 83881 . - . ID=gene-VA249_RS00400;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=VA249_RS00400;old_locus_tag=VYA_00670 NZ_AP024165.1 Protein Homology CDS 82526 83881 . - 0 ID=cds-WP_005429991.1;Parent=gene-VA249_RS00400;Dbxref=Genbank:WP_005429991.1;Name=WP_005429991.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017052094.1;locus_tag=VA249_RS00400;product=glutathione-disulfide reductase;protein_id=WP_005429991.1;transl_table=11 NZ_AP024165.1 RefSeq gene 84202 85041 . - . ID=gene-VA249_RS00405;Name=VA249_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00405;old_locus_tag=VYA_00680 NZ_AP024165.1 Protein Homology CDS 84202 85041 . - 0 ID=cds-WP_221068448.1;Parent=gene-VA249_RS00405;Dbxref=Genbank:WP_221068448.1;Name=WP_221068448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954220.1;locus_tag=VA249_RS00405;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_221068448.1;transl_table=11 NZ_AP024165.1 RefSeq gene 85448 87490 . + . ID=gene-VA249_RS00410;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=VA249_RS00410;old_locus_tag=VYA_00690 NZ_AP024165.1 Protein Homology CDS 85448 87490 . + 0 ID=cds-WP_221068449.1;Parent=gene-VA249_RS00410;Dbxref=Genbank:WP_221068449.1;Name=WP_221068449.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196690.1;locus_tag=VA249_RS00410;product=oligopeptidase A;protein_id=WP_221068449.1;transl_table=11 NZ_AP024165.1 RefSeq gene 87584 88048 . - . ID=gene-VA249_RS00415;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=VA249_RS00415;old_locus_tag=VYA_00700 NZ_AP024165.1 Protein Homology CDS 87584 88048 . - 0 ID=cds-WP_128812348.1;Parent=gene-VA249_RS00415;Dbxref=Genbank:WP_128812348.1;Name=WP_128812348.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017055560.1;locus_tag=VA249_RS00415;product=transcriptional regulator AsnC;protein_id=WP_128812348.1;transl_table=11 NZ_AP024165.1 RefSeq gene 88231 89010 . + . ID=gene-VA249_RS00420;Name=VA249_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00420;old_locus_tag=VYA_00710 NZ_AP024165.1 Protein Homology CDS 88231 89010 . + 0 ID=cds-WP_221068450.1;Parent=gene-VA249_RS00420;Dbxref=Genbank:WP_221068450.1;Name=WP_221068450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821114.1;locus_tag=VA249_RS00420;product=class I SAM-dependent methyltransferase;protein_id=WP_221068450.1;transl_table=11 NZ_AP024165.1 RefSeq gene 89252 89851 . + . ID=gene-VA249_RS00425;Name=VA249_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00425;old_locus_tag=VYA_00720 NZ_AP024165.1 Protein Homology CDS 89252 89851 . + 0 ID=cds-WP_221068451.1;Parent=gene-VA249_RS00425;Dbxref=Genbank:WP_221068451.1;Name=WP_221068451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705452.1;locus_tag=VA249_RS00425;product=hypothetical protein;protein_id=WP_221068451.1;transl_table=11 NZ_AP024165.1 RefSeq gene 89923 90801 . - . ID=gene-VA249_RS00430;Name=VA249_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00430;old_locus_tag=VYA_00730 NZ_AP024165.1 Protein Homology CDS 89923 90801 . - 0 ID=cds-WP_221068452.1;Parent=gene-VA249_RS00430;Dbxref=Genbank:WP_221068452.1;Name=WP_221068452.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005382935.1;locus_tag=VA249_RS00430;product=carboxylate/amino acid/amine transporter;protein_id=WP_221068452.1;transl_table=11 NZ_AP024165.1 RefSeq gene 90872 91297 . - . ID=gene-VA249_RS00435;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=VA249_RS00435;old_locus_tag=VYA_00740 NZ_AP024165.1 Protein Homology CDS 90872 91297 . - 0 ID=cds-WP_211915629.1;Parent=gene-VA249_RS00435;Dbxref=Genbank:WP_211915629.1;Name=WP_211915629.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020331882.1;locus_tag=VA249_RS00435;product=universal stress protein UspA;protein_id=WP_211915629.1;transl_table=11 NZ_AP024165.1 RefSeq gene 91507 92034 . + . ID=gene-VA249_RS00440;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=VA249_RS00440;old_locus_tag=VYA_00750 NZ_AP024165.1 Protein Homology CDS 91507 92034 . + 0 ID=cds-WP_128812094.1;Parent=gene-VA249_RS00440;Dbxref=Genbank:WP_128812094.1;Name=WP_128812094.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735556.1;locus_tag=VA249_RS00440;product=non-heme ferritin;protein_id=WP_128812094.1;transl_table=11 NZ_AP024165.1 RefSeq gene 92123 92446 . + . ID=gene-VA249_RS00445;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=VA249_RS00445;old_locus_tag=VYA_00760 NZ_AP024165.1 Protein Homology CDS 92123 92446 . + 0 ID=cds-WP_128812092.1;Parent=gene-VA249_RS00445;Dbxref=Genbank:WP_128812092.1;Name=WP_128812092.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079133.1;locus_tag=VA249_RS00445;product=universal stress protein UspB;protein_id=WP_128812092.1;transl_table=11 NZ_AP024165.1 RefSeq gene 92622 93815 . + . ID=gene-VA249_RS00450;Name=VA249_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00450;old_locus_tag=VYA_00770 NZ_AP024165.1 Protein Homology CDS 92622 93815 . + 0 ID=cds-WP_221068453.1;Parent=gene-VA249_RS00450;Dbxref=Genbank:WP_221068453.1;Name=WP_221068453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713180.1;locus_tag=VA249_RS00450;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_221068453.1;transl_table=11 NZ_AP024165.1 RefSeq gene 93899 96346 . - . ID=gene-VA249_RS00455;Name=VA249_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00455;old_locus_tag=VYA_00780 NZ_AP024165.1 Protein Homology CDS 93899 96346 . - 0 ID=cds-WP_221068454.1;Parent=gene-VA249_RS00455;Dbxref=Genbank:WP_221068454.1;Name=WP_221068454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650452.1;locus_tag=VA249_RS00455;product=GGDEF and EAL domain-containing protein;protein_id=WP_221068454.1;transl_table=11 NZ_AP024165.1 RefSeq gene 96535 97443 . - . ID=gene-VA249_RS00460;Name=VA249_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00460;old_locus_tag=VYA_00790 NZ_AP024165.1 Protein Homology CDS 96535 97443 . - 0 ID=cds-WP_221068455.1;Parent=gene-VA249_RS00460;Dbxref=Genbank:WP_221068455.1;Name=WP_221068455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195462.1;locus_tag=VA249_RS00460;product=DMT family transporter;protein_id=WP_221068455.1;transl_table=11 NZ_AP024165.1 RefSeq gene 97670 99202 . + . ID=gene-VA249_RS00465;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=VA249_RS00465;old_locus_tag=VYA_00800 NZ_AP024165.1 Protein Homology CDS 97670 99202 . + 0 ID=cds-WP_221068456.1;Parent=gene-VA249_RS00465;Dbxref=Genbank:WP_221068456.1;Name=WP_221068456.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019826535.1;locus_tag=VA249_RS00465;product=DNA recombination protein RmuC;protein_id=WP_221068456.1;transl_table=11 NZ_AP024165.1 RefSeq gene 99281 100060 . + . ID=gene-VA249_RS00470;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=VA249_RS00470;old_locus_tag=VYA_00810 NZ_AP024165.1 Protein Homology CDS 99281 100060 . + 0 ID=cds-WP_221068457.1;Parent=gene-VA249_RS00470;Dbxref=Genbank:WP_221068457.1;Name=WP_221068457.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020331899.1;locus_tag=VA249_RS00470;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_221068457.1;transl_table=11 NZ_AP024165.1 RefSeq gene 100072 100707 . + . ID=gene-VA249_RS00475;Name=VA249_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00475;old_locus_tag=VYA_00820 NZ_AP024165.1 Protein Homology CDS 100072 100707 . + 0 ID=cds-WP_221068458.1;Parent=gene-VA249_RS00475;Dbxref=Genbank:WP_221068458.1;Name=WP_221068458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394440.1;locus_tag=VA249_RS00475;product=SCP2 domain-containing protein;protein_id=WP_221068458.1;transl_table=11 NZ_AP024165.1 RefSeq gene 100704 102338 . + . ID=gene-VA249_RS00480;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=VA249_RS00480;old_locus_tag=VYA_00830 NZ_AP024165.1 Protein Homology CDS 100704 102338 . + 0 ID=cds-WP_221068459.1;Parent=gene-VA249_RS00480;Dbxref=Genbank:WP_221068459.1;Name=WP_221068459.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529019.1;locus_tag=VA249_RS00480;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_221068459.1;transl_table=11 NZ_AP024165.1 RefSeq gene 102387 102635 . + . ID=gene-VA249_RS00485;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=VA249_RS00485;old_locus_tag=VYA_00840 NZ_AP024165.1 Protein Homology CDS 102387 102635 . + 0 ID=cds-WP_099079135.1;Parent=gene-VA249_RS00485;Dbxref=Genbank:WP_099079135.1;Name=WP_099079135.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020331902.1;locus_tag=VA249_RS00485;product=Sec-independent protein translocase subunit TatA;protein_id=WP_099079135.1;transl_table=11 NZ_AP024165.1 RefSeq gene 102639 103040 . + . ID=gene-VA249_RS00490;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=VA249_RS00490;old_locus_tag=VYA_00850 NZ_AP024165.1 Protein Homology CDS 102639 103040 . + 0 ID=cds-WP_221068460.1;Parent=gene-VA249_RS00490;Dbxref=Genbank:WP_221068460.1;Name=WP_221068460.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433478.1;locus_tag=VA249_RS00490;product=Sec-independent protein translocase protein TatB;protein_id=WP_221068460.1;transl_table=11 NZ_AP024165.1 RefSeq gene 103107 103853 . + . ID=gene-VA249_RS00495;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=VA249_RS00495;old_locus_tag=VYA_00860 NZ_AP024165.1 Protein Homology CDS 103107 103853 . + 0 ID=cds-WP_128812075.1;Parent=gene-VA249_RS00495;Dbxref=Genbank:WP_128812075.1;Name=WP_128812075.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429982.1;locus_tag=VA249_RS00495;product=Sec-independent protein translocase subunit TatC;protein_id=WP_128812075.1;transl_table=11 NZ_AP024165.1 RefSeq gene 103922 104683 . - . ID=gene-VA249_RS00500;Name=VA249_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00500;old_locus_tag=VYA_00870 NZ_AP024165.1 Protein Homology CDS 103922 104683 . - 0 ID=cds-WP_221068461.1;Parent=gene-VA249_RS00500;Dbxref=Genbank:WP_221068461.1;Name=WP_221068461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379240.1;locus_tag=VA249_RS00500;product=TatD family hydrolase;protein_id=WP_221068461.1;transl_table=11 NZ_AP024165.1 RefSeq gene 104870 105931 . + . ID=gene-VA249_RS00505;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=VA249_RS00505;old_locus_tag=VYA_00880 NZ_AP024165.1 Protein Homology CDS 104870 105931 . + 0 ID=cds-WP_221069759.1;Parent=gene-VA249_RS00505;Dbxref=Genbank:WP_221069759.1;Name=WP_221069759.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429984.1;locus_tag=VA249_RS00505;product=porphobilinogen synthase;protein_id=WP_221069759.1;transl_table=11 NZ_AP024165.1 RefSeq gene 106056 106490 . + . ID=gene-VA249_RS00510;Name=VA249_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00510;old_locus_tag=VYA_00890 NZ_AP024165.1 Protein Homology CDS 106056 106490 . + 0 ID=cds-WP_221068462.1;Parent=gene-VA249_RS00510;Dbxref=Genbank:WP_221068462.1;Name=WP_221068462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189946.1;locus_tag=VA249_RS00510;product=GNAT family N-acetyltransferase;protein_id=WP_221068462.1;transl_table=11 NZ_AP024165.1 RefSeq gene 107094 109883 . + . ID=gene-VA249_RS00515;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=VA249_RS00515;old_locus_tag=VYA_00900 NZ_AP024165.1 Protein Homology CDS 107094 109883 . + 0 ID=cds-WP_221068463.1;Parent=gene-VA249_RS00515;Dbxref=Genbank:WP_221068463.1;Name=WP_221068463.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444938.1;locus_tag=VA249_RS00515;product=DNA polymerase I;protein_id=WP_221068463.1;transl_table=11 NZ_AP024165.1 RefSeq gene 110639 111298 . - . ID=gene-VA249_RS00520;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=VA249_RS00520;old_locus_tag=VYA_00910 NZ_AP024165.1 Protein Homology CDS 110639 111298 . - 0 ID=cds-WP_128812069.1;Parent=gene-VA249_RS00520;Dbxref=Genbank:WP_128812069.1;Name=WP_128812069.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448545.1;locus_tag=VA249_RS00520;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_128812069.1;transl_table=11 NZ_AP024165.1 RefSeq gene 111458 112075 . + . ID=gene-VA249_RS00525;Name=VA249_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00525;old_locus_tag=VYA_00920 NZ_AP024165.1 Protein Homology CDS 111458 112075 . + 0 ID=cds-WP_128812067.1;Parent=gene-VA249_RS00525;Dbxref=Genbank:WP_128812067.1;Name=WP_128812067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020433074.1;locus_tag=VA249_RS00525;product=cytochrome c4;protein_id=WP_128812067.1;transl_table=11 NZ_AP024165.1 RefSeq gene 112916 113554 . + . ID=gene-VA249_RS00530;Name=VA249_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00530;old_locus_tag=VYA_00930 NZ_AP024165.1 Protein Homology CDS 112916 113554 . + 0 ID=cds-WP_221068464.1;Parent=gene-VA249_RS00530;Dbxref=Genbank:WP_221068464.1;Name=WP_221068464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433503.1;locus_tag=VA249_RS00530;product=methyltransferase domain-containing protein;protein_id=WP_221068464.1;transl_table=11 NZ_AP024165.1 RefSeq gene 113554 114093 . + . ID=gene-VA249_RS00535;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=VA249_RS00535;old_locus_tag=VYA_00940 NZ_AP024165.1 Protein Homology CDS 113554 114093 . + 0 ID=cds-WP_221068465.1;Parent=gene-VA249_RS00535;Dbxref=Genbank:WP_221068465.1;Name=WP_221068465.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011149190.1;locus_tag=VA249_RS00535;product=Der GTPase-activating protein YihI;protein_id=WP_221068465.1;transl_table=11 NZ_AP024165.1 RefSeq gene 114101 114589 . + . ID=gene-VA249_RS00540;Name=VA249_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00540;old_locus_tag=VYA_00950 NZ_AP024165.1 Protein Homology CDS 114101 114589 . + 0 ID=cds-WP_211915615.1;Parent=gene-VA249_RS00540;Dbxref=Genbank:WP_211915615.1;Name=WP_211915615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379254.1;locus_tag=VA249_RS00540;product=DUF2489 domain-containing protein;protein_id=WP_211915615.1;transl_table=11 NZ_AP024165.1 RefSeq gene 114774 116165 . + . ID=gene-VA249_RS00545;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=VA249_RS00545;old_locus_tag=VYA_00960 NZ_AP024165.1 Protein Homology CDS 114774 116165 . + 0 ID=cds-WP_221068466.1;Parent=gene-VA249_RS00545;Dbxref=Genbank:WP_221068466.1;Name=WP_221068466.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842892.1;locus_tag=VA249_RS00545;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_221068466.1;transl_table=11 NZ_AP024165.1 RefSeq gene 116253 117257 . - . ID=gene-VA249_RS00550;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=VA249_RS00550;old_locus_tag=VYA_00970 NZ_AP024165.1 Protein Homology CDS 116253 117257 . - 0 ID=cds-WP_221068467.1;Parent=gene-VA249_RS00550;Dbxref=Genbank:WP_221068467.1;Name=WP_221068467.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379257.1;locus_tag=VA249_RS00550;product=adenosine deaminase;protein_id=WP_221068467.1;transl_table=11 NZ_AP024165.1 RefSeq gene 117420 119966 . - . ID=gene-VA249_RS00555;Name=VA249_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00555;old_locus_tag=VYA_00980 NZ_AP024165.1 Protein Homology CDS 117420 119966 . - 0 ID=cds-WP_221068468.1;Parent=gene-VA249_RS00555;Dbxref=Genbank:WP_221068468.1;Name=WP_221068468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195450.1;locus_tag=VA249_RS00555;product=EAL domain-containing protein;protein_id=WP_221068468.1;transl_table=11 NZ_AP024165.1 RefSeq gene 120080 121483 . - . ID=gene-VA249_RS00560;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=VA249_RS00560;old_locus_tag=VYA_00990 NZ_AP024165.1 Protein Homology CDS 120080 121483 . - 0 ID=cds-WP_128812058.1;Parent=gene-VA249_RS00560;Dbxref=Genbank:WP_128812058.1;Name=WP_128812058.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017045684.1;locus_tag=VA249_RS00560;product=nitrogen regulation protein NR(I);protein_id=WP_128812058.1;transl_table=11 NZ_AP024165.1 RefSeq gene 121542 122588 . - . ID=gene-VA249_RS00565;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=VA249_RS00565;old_locus_tag=VYA_01000 NZ_AP024165.1 Protein Homology CDS 121542 122588 . - 0 ID=cds-WP_221068469.1;Parent=gene-VA249_RS00565;Dbxref=Genbank:WP_221068469.1;Name=WP_221068469.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821940.1;locus_tag=VA249_RS00565;product=nitrogen regulation protein NR(II);protein_id=WP_221068469.1;transl_table=11 NZ_AP024165.1 RefSeq gene 122731 123297 . - . ID=gene-VA249_RS00570;Name=VA249_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00570;old_locus_tag=VYA_01010 NZ_AP024165.1 Protein Homology CDS 122731 123297 . - 0 ID=cds-WP_221068470.1;Parent=gene-VA249_RS00570;Dbxref=Genbank:WP_221068470.1;Name=WP_221068470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296073.1;locus_tag=VA249_RS00570;product=DUF4124 domain-containing protein;protein_id=WP_221068470.1;transl_table=11 NZ_AP024165.1 RefSeq gene 123457 124866 . - . ID=gene-VA249_RS00575;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=VA249_RS00575;old_locus_tag=VYA_01020 NZ_AP024165.1 Protein Homology CDS 123457 124866 . - 0 ID=cds-WP_211915610.1;Parent=gene-VA249_RS00575;Dbxref=Genbank:WP_211915610.1;Name=WP_211915610.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017789561.1;locus_tag=VA249_RS00575;product=glutamate--ammonia ligase;protein_id=WP_211915610.1;transl_table=11 NZ_AP024165.1 RefSeq gene 125396 127228 . + . ID=gene-VA249_RS00580;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=VA249_RS00580;old_locus_tag=VYA_01030 NZ_AP024165.1 Protein Homology CDS 125396 127228 . + 0 ID=cds-WP_221068471.1;Parent=gene-VA249_RS00580;Dbxref=Genbank:WP_221068471.1;Name=WP_221068471.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596882.1;locus_tag=VA249_RS00580;product=translational GTPase TypA;protein_id=WP_221068471.1;transl_table=11 NZ_AP024165.1 RefSeq gene 127358 127900 . + . ID=gene-VA249_RS00585;Name=VA249_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00585;old_locus_tag=VYA_01040 NZ_AP024165.1 Protein Homology CDS 127358 127900 . + 0 ID=cds-WP_221068472.1;Parent=gene-VA249_RS00585;Dbxref=Genbank:WP_221068472.1;Name=WP_221068472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449052.1;locus_tag=VA249_RS00585;product=AAA family ATPase;protein_id=WP_221068472.1;transl_table=11 NZ_AP024165.1 RefSeq gene 127932 128573 . - . ID=gene-VA249_RS00590;Name=VA249_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00590;old_locus_tag=VYA_01050 NZ_AP024165.1 Protein Homology CDS 127932 128573 . - 0 ID=cds-WP_128812048.1;Parent=gene-VA249_RS00590;Dbxref=Genbank:WP_128812048.1;Name=WP_128812048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741470.1;locus_tag=VA249_RS00590;product=DUF2959 domain-containing protein;protein_id=WP_128812048.1;transl_table=11 NZ_AP024165.1 RefSeq gene 128609 129553 . + . ID=gene-VA249_RS00595;Name=VA249_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00595;old_locus_tag=VYA_01060 NZ_AP024165.1 Protein Homology CDS 128609 129553 . + 0 ID=cds-WP_221068473.1;Parent=gene-VA249_RS00595;Dbxref=Genbank:WP_221068473.1;Name=WP_221068473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650497.1;locus_tag=VA249_RS00595;product=virulence factor BrkB family protein;protein_id=WP_221068473.1;transl_table=11 NZ_AP024165.1 RefSeq gene 129525 129959 . + . ID=gene-VA249_RS00600;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=VA249_RS00600;old_locus_tag=VYA_01070 NZ_AP024165.1 Protein Homology CDS 129525 129959 . + 0 ID=cds-WP_221068474.1;Parent=gene-VA249_RS00600;Dbxref=Genbank:WP_221068474.1;Name=WP_221068474.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016787707.1;locus_tag=VA249_RS00600;product=D-aminoacyl-tRNA deacylase;protein_id=WP_221068474.1;transl_table=11 NZ_AP024165.1 RefSeq gene 130067 130984 . + . ID=gene-VA249_RS00605;Name=VA249_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00605;old_locus_tag=VYA_01080 NZ_AP024165.1 Protein Homology CDS 130067 130984 . + 0 ID=cds-WP_128812042.1;Parent=gene-VA249_RS00605;Dbxref=Genbank:WP_128812042.1;Name=WP_128812042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005456791.1;locus_tag=VA249_RS00605;product=bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase;protein_id=WP_128812042.1;transl_table=11 NZ_AP024165.1 RefSeq gene 130970 132988 . - . ID=gene-VA249_RS00610;Name=VA249_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00610;old_locus_tag=VYA_01090 NZ_AP024165.1 Protein Homology CDS 130970 132988 . - 0 ID=cds-WP_221068475.1;Parent=gene-VA249_RS00610;Dbxref=Genbank:WP_221068475.1;Name=WP_221068475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741785.1;locus_tag=VA249_RS00610;product=AsmA family protein;protein_id=WP_221068475.1;transl_table=11 NZ_AP024165.1 RefSeq gene 133150 134778 . - . ID=gene-VA249_RS00615;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=VA249_RS00615;old_locus_tag=VYA_01100 NZ_AP024165.1 Protein Homology CDS 133150 134778 . - 0 ID=cds-WP_221068476.1;Parent=gene-VA249_RS00615;Dbxref=Genbank:WP_221068476.1;Name=WP_221068476.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017036278.1;locus_tag=VA249_RS00615;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_221068476.1;transl_table=11 NZ_AP024165.1 RefSeq gene 135115 135990 . - . ID=gene-VA249_RS00620;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=VA249_RS00620;old_locus_tag=VYA_01110 NZ_AP024165.1 Protein Homology CDS 135115 135990 . - 0 ID=cds-WP_128812036.1;Parent=gene-VA249_RS00620;Dbxref=Genbank:WP_128812036.1;Name=WP_128812036.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078947.1;locus_tag=VA249_RS00620;product=Hsp33 family molecular chaperone HslO;protein_id=WP_128812036.1;transl_table=11 NZ_AP024165.1 RefSeq gene 136021 136407 . - . ID=gene-VA249_RS00625;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=VA249_RS00625;old_locus_tag=VYA_01120 NZ_AP024165.1 Protein Homology CDS 136021 136407 . - 0 ID=cds-WP_128812034.1;Parent=gene-VA249_RS00625;Dbxref=Genbank:WP_128812034.1;Name=WP_128812034.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012603005.1;locus_tag=VA249_RS00625;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_128812034.1;transl_table=11 NZ_AP024165.1 RefSeq gene 136661 137581 . + . ID=gene-VA249_RS00630;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=VA249_RS00630;old_locus_tag=VYA_01130 NZ_AP024165.1 Protein Homology CDS 136661 137581 . + 0 ID=cds-WP_221068477.1;Parent=gene-VA249_RS00630;Dbxref=Genbank:WP_221068477.1;Name=WP_221068477.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529083.1;locus_tag=VA249_RS00630;product=type II secretion system protein GspC;protein_id=WP_221068477.1;transl_table=11 NZ_AP024165.1 RefSeq gene 137618 139657 . + . ID=gene-VA249_RS00635;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=VA249_RS00635;old_locus_tag=VYA_01140 NZ_AP024165.1 Protein Homology CDS 137618 139657 . + 0 ID=cds-WP_221068478.1;Parent=gene-VA249_RS00635;Dbxref=Genbank:WP_221068478.1;Name=WP_221068478.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444983.1;locus_tag=VA249_RS00635;product=type II secretion system secretin GspD;protein_id=WP_221068478.1;transl_table=11 NZ_AP024165.1 RefSeq gene 139657 141159 . + . ID=gene-VA249_RS00640;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=VA249_RS00640;old_locus_tag=VYA_01150 NZ_AP024165.1 Protein Homology CDS 139657 141159 . + 0 ID=cds-WP_128812030.1;Parent=gene-VA249_RS00640;Dbxref=Genbank:WP_128812030.1;Name=WP_128812030.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189956.1;locus_tag=VA249_RS00640;product=type II secretion system ATPase GspE;protein_id=WP_128812030.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 141159 142375 . + . ID=gene-VA249_RS00645;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=pseudogene;locus_tag=VA249_RS00645;old_locus_tag=VYA_01160;pseudo=true NZ_AP024165.1 Protein Homology CDS 141159 142375 . + 0 ID=cds-VA249_RS00645;Parent=gene-VA249_RS00645;Note=frameshifted;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735600.1;locus_tag=VA249_RS00645;product=type II secretion system inner membrane protein GspF;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 142436 142879 . + . ID=gene-VA249_RS00650;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=VA249_RS00650;old_locus_tag=VYA_01170 NZ_AP024165.1 Protein Homology CDS 142436 142879 . + 0 ID=cds-WP_128812024.1;Parent=gene-VA249_RS00650;Dbxref=Genbank:WP_128812024.1;Name=WP_128812024.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430189.1;locus_tag=VA249_RS00650;product=type II secretion system major pseudopilin GspG;protein_id=WP_128812024.1;transl_table=11 NZ_AP024165.1 RefSeq gene 142911 143516 . + . ID=gene-VA249_RS00655;Name=VA249_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00655;old_locus_tag=VYA_01180 NZ_AP024165.1 Protein Homology CDS 142911 143516 . + 0 ID=cds-WP_211915600.1;Parent=gene-VA249_RS00655;Dbxref=Genbank:WP_211915600.1;Name=WP_211915600.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529093.1;locus_tag=VA249_RS00655;product=GspH/FimT family pseudopilin;protein_id=WP_211915600.1;transl_table=11 NZ_AP024165.1 RefSeq gene 143497 143892 . + . ID=gene-VA249_RS00660;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=VA249_RS00660;old_locus_tag=VYA_01190 NZ_AP024165.1 Protein Homology CDS 143497 143892 . + 0 ID=cds-WP_221068479.1;Parent=gene-VA249_RS00660;Dbxref=Genbank:WP_221068479.1;Name=WP_221068479.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430093.1;locus_tag=VA249_RS00660;product=type II secretion system minor pseudopilin GspI;protein_id=WP_221068479.1;transl_table=11 NZ_AP024165.1 RefSeq gene 143879 144604 . + . ID=gene-VA249_RS00665;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=VA249_RS00665;old_locus_tag=VYA_01200 NZ_AP024165.1 Protein Homology CDS 143879 144604 . + 0 ID=cds-WP_221068480.1;Parent=gene-VA249_RS00665;Dbxref=Genbank:WP_221068480.1;Name=WP_221068480.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009702504.1;locus_tag=VA249_RS00665;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_221068480.1;transl_table=11 NZ_AP024165.1 RefSeq gene 144597 145607 . + . ID=gene-VA249_RS00670;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=VA249_RS00670;old_locus_tag=VYA_01210 NZ_AP024165.1 Protein Homology CDS 144597 145607 . + 0 ID=cds-WP_221068481.1;Parent=gene-VA249_RS00670;Dbxref=Genbank:WP_221068481.1;Name=WP_221068481.1;Ontology_term=GO:0009306,GO:0016021;gbkey=CDS;gene=gspK;go_component=integral component of membrane|0016021||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126780.1;locus_tag=VA249_RS00670;product=type II secretion system minor pseudopilin GspK;protein_id=WP_221068481.1;transl_table=11 NZ_AP024165.1 RefSeq gene 145576 146778 . + . ID=gene-VA249_RS00675;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=VA249_RS00675;old_locus_tag=VYA_01220 NZ_AP024165.1 Protein Homology CDS 145576 146778 . + 0 ID=cds-WP_221068482.1;Parent=gene-VA249_RS00675;Dbxref=Genbank:WP_221068482.1;Name=WP_221068482.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635008.1;locus_tag=VA249_RS00675;product=type II secretion system protein GspL;protein_id=WP_221068482.1;transl_table=11 NZ_AP024165.1 RefSeq gene 146786 147277 . + . ID=gene-VA249_RS00680;Name=VA249_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00680;old_locus_tag=VYA_01230 NZ_AP024165.1 Protein Homology CDS 146786 147277 . + 0 ID=cds-WP_221069762.1;Parent=gene-VA249_RS00680;Dbxref=Genbank:WP_221069762.1;Name=WP_221069762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008218432.1;locus_tag=VA249_RS00680;product=type II secretion system protein GspM;protein_id=WP_221069762.1;transl_table=11 NZ_AP024165.1 RefSeq gene 147279 148040 . + . ID=gene-VA249_RS00685;Name=VA249_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00685;old_locus_tag=VYA_01240 NZ_AP024165.1 Protein Homology CDS 147279 148040 . + 0 ID=cds-WP_221068483.1;Parent=gene-VA249_RS00685;Dbxref=Genbank:WP_221068483.1;Name=WP_221068483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434480.1;locus_tag=VA249_RS00685;product=type II secretion system protein N;protein_id=WP_221068483.1;transl_table=11 NZ_AP024165.1 RefSeq gene 148436 149263 . - . ID=gene-VA249_RS00690;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=VA249_RS00690;old_locus_tag=VYA_01250 NZ_AP024165.1 Protein Homology CDS 148436 149263 . - 0 ID=cds-WP_128812014.1;Parent=gene-VA249_RS00690;Dbxref=Genbank:WP_128812014.1;Name=WP_128812014.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017076153.1;locus_tag=VA249_RS00690;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_128812014.1;transl_table=11 NZ_AP024165.1 RefSeq gene 149326 149889 . - . ID=gene-VA249_RS00695;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=VA249_RS00695;old_locus_tag=VYA_01260 NZ_AP024165.1 Protein Homology CDS 149326 149889 . - 0 ID=cds-WP_211915593.1;Parent=gene-VA249_RS00695;Dbxref=Genbank:WP_211915593.1;Name=WP_211915593.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335697.1;locus_tag=VA249_RS00695;product=ADP compounds hydrolase NudE;protein_id=WP_211915593.1;transl_table=11 NZ_AP024165.1 RefSeq gene 150058 150642 . - . ID=gene-VA249_RS00700;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=VA249_RS00700;old_locus_tag=VYA_01270 NZ_AP024165.1 Protein Homology CDS 150058 150642 . - 0 ID=cds-WP_128812012.1;Parent=gene-VA249_RS00700;Dbxref=Genbank:WP_128812012.1;Name=WP_128812012.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008075675.1;locus_tag=VA249_RS00700;product=Fe-S biogenesis protein NfuA;protein_id=WP_128812012.1;transl_table=11 NZ_AP024165.1 RefSeq gene 150740 151510 . - . ID=gene-VA249_RS00705;Name=VA249_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00705 NZ_AP024165.1 Protein Homology CDS 150740 151510 . - 0 ID=cds-WP_221068484.1;Parent=gene-VA249_RS00705;Dbxref=Genbank:WP_221068484.1;Name=WP_221068484.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707962.1;locus_tag=VA249_RS00705;product=phosphoribosyltransferase family protein;protein_id=WP_221068484.1;transl_table=11 NZ_AP024165.1 RefSeq gene 151595 152359 . + . ID=gene-VA249_RS00710;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=VA249_RS00710;old_locus_tag=VYA_01300 NZ_AP024165.1 Protein Homology CDS 151595 152359 . + 0 ID=cds-WP_221068485.1;Parent=gene-VA249_RS00710;Dbxref=Genbank:WP_221068485.1;Name=WP_221068485.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529108.1;locus_tag=VA249_RS00710;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_221068485.1;transl_table=11 NZ_AP024165.1 RefSeq gene 152489 152953 . + . ID=gene-VA249_RS00715;Name=VA249_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00715;old_locus_tag=VYA_01310 NZ_AP024165.1 Protein Homology CDS 152489 152953 . + 0 ID=cds-WP_221068486.1;Parent=gene-VA249_RS00715;Dbxref=Genbank:WP_221068486.1;Name=WP_221068486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379316.1;locus_tag=VA249_RS00715;product=ATP-dependent Lon protease;protein_id=WP_221068486.1;transl_table=11 NZ_AP024165.1 RefSeq gene 153069 155387 . - . ID=gene-VA249_RS00720;Name=VA249_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00720;old_locus_tag=VYA_01320 NZ_AP024165.1 Protein Homology CDS 153069 155387 . - 0 ID=cds-WP_221068487.1;Parent=gene-VA249_RS00720;Dbxref=Genbank:WP_221068487.1;Name=WP_221068487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698972.1;locus_tag=VA249_RS00720;product=RNA-binding transcriptional accessory protein;protein_id=WP_221068487.1;transl_table=11 NZ_AP024165.1 RefSeq gene 155597 157477 . + . ID=gene-VA249_RS00725;Name=VA249_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00725;old_locus_tag=VYA_01330 NZ_AP024165.1 Protein Homology CDS 155597 157477 . + 0 ID=cds-WP_221068488.1;Parent=gene-VA249_RS00725;Dbxref=Genbank:WP_221068488.1;Name=WP_221068488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434462.1;locus_tag=VA249_RS00725;product=RimK/LysX family protein;protein_id=WP_221068488.1;transl_table=11 NZ_AP024165.1 RefSeq gene 157647 158132 . - . ID=gene-VA249_RS00730;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=VA249_RS00730;old_locus_tag=VYA_01340 NZ_AP024165.1 Protein Homology CDS 157647 158132 . - 0 ID=cds-WP_211915587.1;Parent=gene-VA249_RS00730;Dbxref=Genbank:WP_211915587.1;Name=WP_211915587.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448472.1;locus_tag=VA249_RS00730;product=transcription elongation factor GreB;protein_id=WP_211915587.1;transl_table=11 NZ_AP024165.1 RefSeq gene 158347 159066 . + . ID=gene-VA249_RS00735;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=VA249_RS00735;old_locus_tag=VYA_01350 NZ_AP024165.1 Protein Homology CDS 158347 159066 . + 0 ID=cds-WP_045460431.1;Parent=gene-VA249_RS00735;Dbxref=Genbank:WP_045460431.1;Name=WP_045460431.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003096259.1;locus_tag=VA249_RS00735;product=two-component system response regulator OmpR;protein_id=WP_045460431.1;transl_table=11 NZ_AP024165.1 RefSeq gene 159273 160565 . + . ID=gene-VA249_RS00740;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=VA249_RS00740;old_locus_tag=VYA_01360 NZ_AP024165.1 Protein Homology CDS 159273 160565 . + 0 ID=cds-WP_221068489.1;Parent=gene-VA249_RS00740;Dbxref=Genbank:WP_221068489.1;Name=WP_221068489.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=envZ;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445027.1;locus_tag=VA249_RS00740;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_221068489.1;transl_table=11 NZ_AP024165.1 RefSeq gene 160652 162046 . - . ID=gene-VA249_RS00745;Name=VA249_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00745;old_locus_tag=VYA_01370 NZ_AP024165.1 Protein Homology CDS 160652 162046 . - 0 ID=cds-WP_164837230.1;Parent=gene-VA249_RS00745;Dbxref=Genbank:WP_164837230.1;Name=WP_164837230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384732.1;locus_tag=VA249_RS00745;product=uracil-xanthine permease family protein;protein_id=WP_164837230.1;transl_table=11 NZ_AP024165.1 RefSeq gene 162295 164280 . - . ID=gene-VA249_RS00750;Name=VA249_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00750;old_locus_tag=VYA_01380 NZ_AP024165.1 Protein Homology CDS 162295 164280 . - 0 ID=cds-WP_221068490.1;Parent=gene-VA249_RS00750;Dbxref=Genbank:WP_221068490.1;Name=WP_221068490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529122.1;locus_tag=VA249_RS00750;product=S9 family peptidase;protein_id=WP_221068490.1;transl_table=11 NZ_AP024165.1 RefSeq gene 164537 166618 . - . ID=gene-VA249_RS00755;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=VA249_RS00755;old_locus_tag=VYA_01390 NZ_AP024165.1 Protein Homology CDS 164537 166618 . - 0 ID=cds-WP_211915585.1;Parent=gene-VA249_RS00755;Dbxref=Genbank:WP_211915585.1;Name=WP_211915585.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335704.1;locus_tag=VA249_RS00755;product=ATP-dependent DNA helicase RecG;protein_id=WP_211915585.1;transl_table=11 NZ_AP024165.1 RefSeq gene 166834 167517 . - . ID=gene-VA249_RS00760;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=VA249_RS00760;old_locus_tag=VYA_01400 NZ_AP024165.1 Protein Homology CDS 166834 167517 . - 0 ID=cds-WP_128811996.1;Parent=gene-VA249_RS00760;Dbxref=Genbank:WP_128811996.1;Name=WP_128811996.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006880826.1;locus_tag=VA249_RS00760;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_128811996.1;transl_table=11 NZ_AP024165.1 RefSeq gene 167572 169692 . - . ID=gene-VA249_RS00765;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=VA249_RS00765;old_locus_tag=VYA_01410 NZ_AP024165.1 Protein Homology CDS 167572 169692 . - 0 ID=cds-WP_128811995.1;Parent=gene-VA249_RS00765;Dbxref=Genbank:WP_128811995.1;Name=WP_128811995.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895463.1;locus_tag=VA249_RS00765;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_128811995.1;transl_table=11 NZ_AP024165.1 RefSeq gene 169732 170004 . - . ID=gene-VA249_RS00770;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=VA249_RS00770;old_locus_tag=VYA_01420 NZ_AP024165.1 Protein Homology CDS 169732 170004 . - 0 ID=cds-WP_005379346.1;Parent=gene-VA249_RS00770;Dbxref=Genbank:WP_005379346.1;Name=WP_005379346.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379346.1;locus_tag=VA249_RS00770;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_005379346.1;transl_table=11 NZ_AP024165.1 RefSeq gene 170209 170832 . - . ID=gene-VA249_RS00775;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=VA249_RS00775;old_locus_tag=VYA_01430 NZ_AP024165.1 Protein Homology CDS 170209 170832 . - 0 ID=cds-WP_128811994.1;Parent=gene-VA249_RS00775;Dbxref=Genbank:WP_128811994.1;Name=WP_128811994.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017062466.1;locus_tag=VA249_RS00775;product=guanylate kinase;protein_id=WP_128811994.1;transl_table=11 NZ_AP024165.1 RefSeq gene 170865 171029 . + . ID=gene-VA249_RS00780;Name=VA249_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00780;old_locus_tag=VYA_01440 NZ_AP024165.1 GeneMarkS-2+ CDS 170865 171029 . + 0 ID=cds-WP_211916559.1;Parent=gene-VA249_RS00780;Dbxref=Genbank:WP_211916559.1;Name=WP_211916559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS00780;product=hypothetical protein;protein_id=WP_211916559.1;transl_table=11 NZ_AP024165.1 RefSeq gene 171148 172362 . - . ID=gene-VA249_RS00785;Name=VA249_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00785;old_locus_tag=VYA_01450 NZ_AP024165.1 Protein Homology CDS 171148 172362 . - 0 ID=cds-WP_221068491.1;Parent=gene-VA249_RS00785;Dbxref=Genbank:WP_221068491.1;Name=WP_221068491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195420.1;locus_tag=VA249_RS00785;product=hypothetical protein;protein_id=WP_221068491.1;transl_table=11 NZ_AP024165.1 RefSeq gene 172374 173003 . - . ID=gene-VA249_RS00790;Name=VA249_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00790;old_locus_tag=VYA_01460 NZ_AP024165.1 Protein Homology CDS 172374 173003 . - 0 ID=cds-WP_128811992.1;Parent=gene-VA249_RS00790;Dbxref=Genbank:WP_128811992.1;Name=WP_128811992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650172.1;locus_tag=VA249_RS00790;product=energy transducer TonB;protein_id=WP_128811992.1;transl_table=11 NZ_AP024165.1 RefSeq gene 173008 173415 . - . ID=gene-VA249_RS00795;Name=VA249_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00795;old_locus_tag=VYA_01470 NZ_AP024165.1 Protein Homology CDS 173008 173415 . - 0 ID=cds-WP_128811991.1;Parent=gene-VA249_RS00795;Dbxref=Genbank:WP_128811991.1;Name=WP_128811991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195418.1;locus_tag=VA249_RS00795;product=biopolymer transporter ExbD;protein_id=WP_128811991.1;transl_table=11 NZ_AP024165.1 RefSeq gene 173460 173987 . - . ID=gene-VA249_RS00800;Name=VA249_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00800;old_locus_tag=VYA_01480 NZ_AP024165.1 Protein Homology CDS 173460 173987 . - 0 ID=cds-WP_128811990.1;Parent=gene-VA249_RS00800;Dbxref=Genbank:WP_128811990.1;Name=WP_128811990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529134.1;locus_tag=VA249_RS00800;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_128811990.1;transl_table=11 NZ_AP024165.1 RefSeq gene 173997 175358 . - . ID=gene-VA249_RS00805;Name=VA249_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00805;old_locus_tag=VYA_01490 NZ_AP024165.1 Protein Homology CDS 173997 175358 . - 0 ID=cds-WP_221068492.1;Parent=gene-VA249_RS00805;Dbxref=Genbank:WP_221068492.1;Name=WP_221068492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384750.1;locus_tag=VA249_RS00805;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_221068492.1;transl_table=11 NZ_AP024165.1 RefSeq gene 175362 176126 . - . ID=gene-VA249_RS00810;Name=VA249_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00810;old_locus_tag=VYA_01500 NZ_AP024165.1 Protein Homology CDS 175362 176126 . - 0 ID=cds-WP_128811986.1;Parent=gene-VA249_RS00810;Dbxref=Genbank:WP_128811986.1;Name=WP_128811986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230567.1;locus_tag=VA249_RS00810;product=DUF3450 domain-containing protein;protein_id=WP_128811986.1;transl_table=11 NZ_AP024165.1 RefSeq gene 176200 178806 . - . ID=gene-VA249_RS00815;Name=VA249_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00815;old_locus_tag=VYA_01510 NZ_AP024165.1 Protein Homology CDS 176200 178806 . - 0 ID=cds-WP_221068493.1;Parent=gene-VA249_RS00815;Dbxref=Genbank:WP_221068493.1;Name=WP_221068493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195417.1;locus_tag=VA249_RS00815;product=TonB-dependent receptor;protein_id=WP_221068493.1;transl_table=11 NZ_AP024165.1 RefSeq gene 179623 180648 . + . ID=gene-VA249_RS00820;Name=VA249_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00820;old_locus_tag=VYA_01520 NZ_AP024165.1 Protein Homology CDS 179623 180648 . + 0 ID=cds-WP_221068494.1;Parent=gene-VA249_RS00820;Dbxref=Genbank:WP_221068494.1;Name=WP_221068494.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230569.1;locus_tag=VA249_RS00820;product=ABC transporter permease subunit;protein_id=WP_221068494.1;transl_table=11 NZ_AP024165.1 RefSeq gene 180650 181693 . + . ID=gene-VA249_RS00825;Name=VA249_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00825;old_locus_tag=VYA_01530 NZ_AP024165.1 Protein Homology CDS 180650 181693 . + 0 ID=cds-WP_221068495.1;Parent=gene-VA249_RS00825;Dbxref=Genbank:WP_221068495.1;Name=WP_221068495.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430115.1;locus_tag=VA249_RS00825;product=ABC transporter permease subunit;protein_id=WP_221068495.1;transl_table=11 NZ_AP024165.1 RefSeq gene 181786 183615 . + . ID=gene-VA249_RS00830;Name=VA249_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00830;old_locus_tag=VYA_01540 NZ_AP024165.1 Protein Homology CDS 181786 183615 . + 0 ID=cds-WP_221068496.1;Parent=gene-VA249_RS00830;Dbxref=Genbank:WP_221068496.1;Name=WP_221068496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734681.1;locus_tag=VA249_RS00830;product=extracellular solute-binding protein;protein_id=WP_221068496.1;transl_table=11 NZ_AP024165.1 RefSeq gene 183625 184482 . + . ID=gene-VA249_RS00835;Name=VA249_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00835;old_locus_tag=VYA_01550 NZ_AP024165.1 Protein Homology CDS 183625 184482 . + 0 ID=cds-WP_221068497.1;Parent=gene-VA249_RS00835;Dbxref=Genbank:WP_221068497.1;Name=WP_221068497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707949.1;locus_tag=VA249_RS00835;product=ABC transporter ATP-binding protein;protein_id=WP_221068497.1;transl_table=11 NZ_AP024165.1 RefSeq gene 184519 185358 . + . ID=gene-VA249_RS00840;Name=VA249_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00840;old_locus_tag=VYA_01560 NZ_AP024165.1 Protein Homology CDS 184519 185358 . + 0 ID=cds-WP_128811974.1;Parent=gene-VA249_RS00840;Dbxref=Genbank:WP_128811974.1;Name=WP_128811974.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394930.1;locus_tag=VA249_RS00840;product=ATP-binding cassette domain-containing protein;protein_id=WP_128811974.1;transl_table=11 NZ_AP024165.1 RefSeq gene 185509 185934 . + . ID=gene-VA249_RS00845;Name=VA249_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00845;old_locus_tag=VYA_01570 NZ_AP024165.1 Protein Homology CDS 185509 185934 . + 0 ID=cds-WP_221068498.1;Parent=gene-VA249_RS00845;Dbxref=Genbank:WP_221068498.1;Name=WP_221068498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430195.1;locus_tag=VA249_RS00845;product=phosphate-starvation-inducible PsiE family protein;protein_id=WP_221068498.1;transl_table=11 NZ_AP024165.1 RefSeq gene 186101 186472 . + . ID=gene-VA249_RS00850;Name=VA249_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00850 NZ_AP024165.1 Protein Homology CDS 186101 186472 . + 0 ID=cds-WP_221068499.1;Parent=gene-VA249_RS00850;Dbxref=Genbank:WP_221068499.1;Name=WP_221068499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698963.1;locus_tag=VA249_RS00850;product=hypothetical protein;protein_id=WP_221068499.1;transl_table=11 NZ_AP024165.1 RefSeq gene 186671 187666 . + . ID=gene-VA249_RS00855;Name=VA249_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00855;old_locus_tag=VYA_01580 NZ_AP024165.1 Protein Homology CDS 186671 187666 . + 0 ID=cds-WP_221068500.1;Parent=gene-VA249_RS00855;Dbxref=Genbank:WP_221068500.1;Name=WP_221068500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189975.1;locus_tag=VA249_RS00855;product=EamA family transporter;protein_id=WP_221068500.1;transl_table=11 NZ_AP024165.1 RefSeq gene 187842 188246 . - . ID=gene-VA249_RS00860;Name=VA249_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00860;old_locus_tag=VYA_01590 NZ_AP024165.1 Protein Homology CDS 187842 188246 . - 0 ID=cds-WP_221068501.1;Parent=gene-VA249_RS00860;Dbxref=Genbank:WP_221068501.1;Name=WP_221068501.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033674.1;locus_tag=VA249_RS00860;product=NirD/YgiW/YdeI family stress tolerance protein;protein_id=WP_221068501.1;transl_table=11 NZ_AP024165.1 RefSeq gene 188525 190090 . + . ID=gene-VA249_RS00865;Name=VA249_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00865;old_locus_tag=VYA_01600 NZ_AP024165.1 Protein Homology CDS 188525 190090 . + 0 ID=cds-WP_221069764.1;Parent=gene-VA249_RS00865;Dbxref=Genbank:WP_221069764.1;Name=WP_221069764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006233756.1;locus_tag=VA249_RS00865;product=DUF6056 family protein;protein_id=WP_221069764.1;transl_table=11 NZ_AP024165.1 RefSeq gene 190102 190449 . + . ID=gene-VA249_RS00870;Name=VA249_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00870;old_locus_tag=VYA_01610 NZ_AP024165.1 Protein Homology CDS 190102 190449 . + 0 ID=cds-WP_221068502.1;Parent=gene-VA249_RS00870;Dbxref=Genbank:WP_221068502.1;Name=WP_221068502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016060.2;locus_tag=VA249_RS00870;product=GtrA family protein;protein_id=WP_221068502.1;transl_table=11 NZ_AP024165.1 RefSeq gene 190449 191429 . + . ID=gene-VA249_RS00875;Name=VA249_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00875;old_locus_tag=VYA_01620 NZ_AP024165.1 Protein Homology CDS 190449 191429 . + 0 ID=cds-WP_221069766.1;Parent=gene-VA249_RS00875;Dbxref=Genbank:WP_221069766.1;Name=WP_221069766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650191.1;locus_tag=VA249_RS00875;product=glycosyltransferase family 2 protein;protein_id=WP_221069766.1;transl_table=11 NZ_AP024165.1 RefSeq gene 191552 192418 . - . ID=gene-VA249_RS00880;Name=VA249_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00880;old_locus_tag=VYA_01630 NZ_AP024165.1 Protein Homology CDS 191552 192418 . - 0 ID=cds-WP_128811966.1;Parent=gene-VA249_RS00880;Dbxref=Genbank:WP_128811966.1;Name=WP_128811966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640570.1;locus_tag=VA249_RS00880;product=YicC family protein;protein_id=WP_128811966.1;transl_table=11 NZ_AP024165.1 RefSeq gene 192593 193309 . + . ID=gene-VA249_RS00885;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=VA249_RS00885;old_locus_tag=VYA_01640 NZ_AP024165.1 Protein Homology CDS 192593 193309 . + 0 ID=cds-WP_128811964.1;Parent=gene-VA249_RS00885;Dbxref=Genbank:WP_128811964.1;Name=WP_128811964.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013855721.1;locus_tag=VA249_RS00885;product=ribonuclease PH;protein_id=WP_128811964.1;transl_table=11 NZ_AP024165.1 RefSeq gene 193466 194107 . + . ID=gene-VA249_RS00890;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=VA249_RS00890;old_locus_tag=VYA_01650 NZ_AP024165.1 Protein Homology CDS 193466 194107 . + 0 ID=cds-WP_128811962.1;Parent=gene-VA249_RS00890;Dbxref=Genbank:WP_128811962.1;Name=WP_128811962.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735727.1;locus_tag=VA249_RS00890;product=orotate phosphoribosyltransferase;protein_id=WP_128811962.1;transl_table=11 NZ_AP024165.1 RefSeq gene 194577 195527 . - . ID=gene-VA249_RS00895;Name=VA249_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00895;old_locus_tag=VYA_01660 NZ_AP024165.1 Protein Homology CDS 194577 195527 . - 0 ID=cds-WP_221068503.1;Parent=gene-VA249_RS00895;Dbxref=Genbank:WP_221068503.1;Name=WP_221068503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698956.1;locus_tag=VA249_RS00895;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_221068503.1;transl_table=11 NZ_AP024165.1 RefSeq gene 195533 196123 . - . ID=gene-VA249_RS00900;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=VA249_RS00900;old_locus_tag=VYA_01670 NZ_AP024165.1 Protein Homology CDS 195533 196123 . - 0 ID=cds-WP_043046348.1;Parent=gene-VA249_RS00900;Dbxref=Genbank:WP_043046348.1;Name=WP_043046348.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017097392.1;locus_tag=VA249_RS00900;product=nucleoid occlusion factor SlmA;protein_id=WP_043046348.1;transl_table=11 NZ_AP024165.1 RefSeq gene 196283 197500 . - . ID=gene-VA249_RS00905;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=VA249_RS00905;old_locus_tag=VYA_01680 NZ_AP024165.1 Protein Homology CDS 196283 197500 . - 0 ID=cds-WP_221068504.1;Parent=gene-VA249_RS00905;Dbxref=Genbank:WP_221068504.1;Name=WP_221068504.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707942.1;locus_tag=VA249_RS00905;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_221068504.1;transl_table=11 NZ_AP024165.1 RefSeq gene 197812 198486 . + . ID=gene-VA249_RS00910;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=VA249_RS00910;old_locus_tag=VYA_01690 NZ_AP024165.1 Protein Homology CDS 197812 198486 . + 0 ID=cds-WP_211916520.1;Parent=gene-VA249_RS00910;Dbxref=Genbank:WP_211916520.1;Name=WP_211916520.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013855726.1;locus_tag=VA249_RS00910;product=DNA repair protein RadC;protein_id=WP_211916520.1;transl_table=11 NZ_AP024165.1 RefSeq gene 198789 199025 . + . ID=gene-VA249_RS00915;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=VA249_RS00915;old_locus_tag=VYA_01700 NZ_AP024165.1 Protein Homology CDS 198789 199025 . + 0 ID=cds-WP_005467944.1;Parent=gene-VA249_RS00915;Dbxref=Genbank:WP_005467944.1;Name=WP_005467944.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006881432.1;locus_tag=VA249_RS00915;product=50S ribosomal protein L28;protein_id=WP_005467944.1;transl_table=11 NZ_AP024165.1 RefSeq gene 199039 199209 . + . ID=gene-VA249_RS00920;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=VA249_RS00920;old_locus_tag=VYA_01710 NZ_AP024165.1 Protein Homology CDS 199039 199209 . + 0 ID=cds-WP_004410866.1;Parent=gene-VA249_RS00920;Dbxref=Genbank:WP_004410866.1;Name=WP_004410866.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013343654.1;locus_tag=VA249_RS00920;product=50S ribosomal protein L33;protein_id=WP_004410866.1;transl_table=11 NZ_AP024165.1 RefSeq gene 199472 199948 . + . ID=gene-VA249_RS00925;Name=VA249_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00925;old_locus_tag=VYA_01720 NZ_AP024165.1 Protein Homology CDS 199472 199948 . + 0 ID=cds-WP_221068505.1;Parent=gene-VA249_RS00925;Dbxref=Genbank:WP_221068505.1;Name=WP_221068505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445097.1;locus_tag=VA249_RS00925;product=hypothetical protein;protein_id=WP_221068505.1;transl_table=11 NZ_AP024165.1 RefSeq gene 200073 200882 . + . ID=gene-VA249_RS00930;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=VA249_RS00930;old_locus_tag=VYA_01730 NZ_AP024165.1 Protein Homology CDS 200073 200882 . + 0 ID=cds-WP_221068506.1;Parent=gene-VA249_RS00930;Dbxref=Genbank:WP_221068506.1;Name=WP_221068506.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535594.1;locus_tag=VA249_RS00930;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_221068506.1;transl_table=11 NZ_AP024165.1 RefSeq gene 200905 201657 . + . ID=gene-VA249_RS00935;Name=VA249_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00935;old_locus_tag=VYA_01740 NZ_AP024165.1 Protein Homology CDS 200905 201657 . + 0 ID=cds-WP_099079210.1;Parent=gene-VA249_RS00935;Dbxref=Genbank:WP_099079210.1;Name=WP_099079210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535595.1;locus_tag=VA249_RS00935;product=glycosyltransferase family 25 protein;protein_id=WP_099079210.1;transl_table=11 NZ_AP024165.1 RefSeq gene 201667 202149 . + . ID=gene-VA249_RS00940;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=VA249_RS00940;old_locus_tag=VYA_01750 NZ_AP024165.1 Protein Homology CDS 201667 202149 . + 0 ID=cds-WP_221068507.1;Parent=gene-VA249_RS00940;Dbxref=Genbank:WP_221068507.1;Name=WP_221068507.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817198.1;locus_tag=VA249_RS00940;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_221068507.1;transl_table=11 NZ_AP024165.1 RefSeq gene 202136 203077 . + . ID=gene-VA249_RS00945;Name=VA249_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00945;old_locus_tag=VYA_01760 NZ_AP024165.1 Protein Homology CDS 202136 203077 . + 0 ID=cds-WP_221068508.1;Parent=gene-VA249_RS00945;Dbxref=Genbank:WP_221068508.1;Name=WP_221068508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462500.1;locus_tag=VA249_RS00945;product=glycosyl transferase family 90;protein_id=WP_221068508.1;transl_table=11 NZ_AP024165.1 RefSeq gene 203155 203922 . - . ID=gene-VA249_RS00950;Name=VA249_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00950;old_locus_tag=VYA_01770 NZ_AP024165.1 Protein Homology CDS 203155 203922 . - 0 ID=cds-WP_221068509.1;Parent=gene-VA249_RS00950;Dbxref=Genbank:WP_221068509.1;Name=WP_221068509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017026671.1;locus_tag=VA249_RS00950;product=glycosyltransferase family 2 protein;protein_id=WP_221068509.1;transl_table=11 NZ_AP024165.1 RefSeq gene 203960 205015 . - . ID=gene-VA249_RS00955;Name=VA249_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00955;old_locus_tag=VYA_01780 NZ_AP024165.1 Protein Homology CDS 203960 205015 . - 0 ID=cds-WP_221068510.1;Parent=gene-VA249_RS00955;Dbxref=Genbank:WP_221068510.1;Name=WP_221068510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189984.1;locus_tag=VA249_RS00955;product=glycosyltransferase family 9 protein;protein_id=WP_221068510.1;transl_table=11 NZ_AP024165.1 RefSeq gene 205121 205528 . + . ID=gene-VA249_RS00960;Name=VA249_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00960;old_locus_tag=VYA_01790 NZ_AP024165.1 Protein Homology CDS 205121 205528 . + 0 ID=cds-WP_221068511.1;Parent=gene-VA249_RS00960;Dbxref=Genbank:WP_221068511.1;Name=WP_221068511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707933.1;locus_tag=VA249_RS00960;product=diacylglycerol kinase;protein_id=WP_221068511.1;transl_table=11 NZ_AP024165.1 RefSeq gene 205550 206281 . + . ID=gene-VA249_RS00965;Name=VA249_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00965;old_locus_tag=VYA_01800 NZ_AP024165.1 Protein Homology CDS 205550 206281 . + 0 ID=cds-WP_221068512.1;Parent=gene-VA249_RS00965;Dbxref=Genbank:WP_221068512.1;Name=WP_221068512.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384791.1;locus_tag=VA249_RS00965;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=WP_221068512.1;transl_table=11 NZ_AP024165.1 RefSeq gene 206454 207518 . + . ID=gene-VA249_RS00970;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=VA249_RS00970;old_locus_tag=VYA_01810 NZ_AP024165.1 Protein Homology CDS 206454 207518 . + 0 ID=cds-WP_221068513.1;Parent=gene-VA249_RS00970;Dbxref=Genbank:WP_221068513.1;Name=WP_221068513.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820714.1;locus_tag=VA249_RS00970;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_221068513.1;transl_table=11 NZ_AP024165.1 RefSeq gene 207518 208384 . + . ID=gene-VA249_RS00975;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=VA249_RS00975;old_locus_tag=VYA_01820 NZ_AP024165.1 Protein Homology CDS 207518 208384 . + 0 ID=cds-WP_221068514.1;Parent=gene-VA249_RS00975;Dbxref=Genbank:WP_221068514.1;Name=WP_221068514.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428136.1;locus_tag=VA249_RS00975;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_221068514.1;transl_table=11 NZ_AP024165.1 RefSeq gene 208385 208780 . + . ID=gene-VA249_RS00980;Name=VA249_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00980;old_locus_tag=VYA_01830 NZ_AP024165.1 Protein Homology CDS 208385 208780 . + 0 ID=cds-WP_221068515.1;Parent=gene-VA249_RS00980;Dbxref=Genbank:WP_221068515.1;Name=WP_221068515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005489486.1;locus_tag=VA249_RS00980;product=FdtA/QdtA family cupin domain-containing protein;protein_id=WP_221068515.1;transl_table=11 NZ_AP024165.1 RefSeq gene 208771 209313 . + . ID=gene-VA249_RS00985;Name=VA249_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00985;old_locus_tag=VYA_01840 NZ_AP024165.1 Protein Homology CDS 208771 209313 . + 0 ID=cds-WP_221068516.1;Parent=gene-VA249_RS00985;Dbxref=Genbank:WP_221068516.1;Name=WP_221068516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024698.2;locus_tag=VA249_RS00985;product=GNAT family N-acetyltransferase;protein_id=WP_221068516.1;transl_table=11 NZ_AP024165.1 RefSeq gene 209322 209609 . + . ID=gene-VA249_RS00990;Name=VA249_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00990;old_locus_tag=VYA_01850 NZ_AP024165.1 Protein Homology CDS 209322 209609 . + 0 ID=cds-WP_128811926.1;Parent=gene-VA249_RS00990;Dbxref=Genbank:WP_128811926.1;Name=WP_128811926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449092.1;locus_tag=VA249_RS00990;product=hypothetical protein;protein_id=WP_128811926.1;transl_table=11 NZ_AP024165.1 RefSeq gene 209620 210321 . + . ID=gene-VA249_RS00995;Name=VA249_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS00995;old_locus_tag=VYA_01860 NZ_AP024165.1 Protein Homology CDS 209620 210321 . + 0 ID=cds-WP_211915554.1;Parent=gene-VA249_RS00995;Dbxref=Genbank:WP_211915554.1;Name=WP_211915554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449093.1;locus_tag=VA249_RS00995;product=SDR family oxidoreductase;protein_id=WP_211915554.1;transl_table=11 NZ_AP024165.1 RefSeq gene 210321 211670 . + . ID=gene-VA249_RS01000;Name=VA249_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01000;old_locus_tag=VYA_01870 NZ_AP024165.1 Protein Homology CDS 210321 211670 . + 0 ID=cds-WP_225927093.1;Parent=gene-VA249_RS01000;Dbxref=Genbank:WP_225927093.1;Name=WP_225927093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449094.1;locus_tag=VA249_RS01000;product=fatty acid--CoA ligase family protein;protein_id=WP_225927093.1;transl_table=11 NZ_AP024165.1 RefSeq gene 211667 212764 . + . ID=gene-VA249_RS01005;Name=VA249_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01005;old_locus_tag=VYA_01880 NZ_AP024165.1 Protein Homology CDS 211667 212764 . + 0 ID=cds-WP_221068517.1;Parent=gene-VA249_RS01005;Dbxref=Genbank:WP_221068517.1;Name=WP_221068517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017085927.1;locus_tag=VA249_RS01005;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_221068517.1;transl_table=11 NZ_AP024165.1 RefSeq gene 212773 213714 . + . ID=gene-VA249_RS01010;Name=VA249_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01010;old_locus_tag=VYA_01890 NZ_AP024165.1 Protein Homology CDS 212773 213714 . + 0 ID=cds-WP_221068518.1;Parent=gene-VA249_RS01010;Dbxref=Genbank:WP_221068518.1;Name=WP_221068518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=VA249_RS01010;product=glycosyltransferase;protein_id=WP_221068518.1;transl_table=11 NZ_AP024165.1 RefSeq gene 214372 215466 . - . ID=gene-VA249_RS01020;Name=VA249_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01020;old_locus_tag=VYA_01900 NZ_AP024165.1 Protein Homology CDS 214372 215466 . - 0 ID=cds-WP_221068519.1;Parent=gene-VA249_RS01020;Dbxref=Genbank:WP_221068519.1;Name=WP_221068519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=VA249_RS01020;product=glycosyltransferase;protein_id=WP_221068519.1;transl_table=11 NZ_AP024165.1 RefSeq gene 215500 216234 . - . ID=gene-VA249_RS01025;Name=VA249_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01025;old_locus_tag=VYA_01910 NZ_AP024165.1 Protein Homology CDS 215500 216234 . - 0 ID=cds-WP_225927094.1;Parent=gene-VA249_RS01025;Dbxref=Genbank:WP_225927094.1;Name=WP_225927094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843915.1;locus_tag=VA249_RS01025;product=glycosyltransferase family 25 protein;protein_id=WP_225927094.1;transl_table=11 NZ_AP024165.1 RefSeq gene 216236 217507 . - . ID=gene-VA249_RS01030;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=VA249_RS01030;old_locus_tag=VYA_01920 NZ_AP024165.1 Protein Homology CDS 216236 217507 . - 0 ID=cds-WP_221068520.1;Parent=gene-VA249_RS01030;Dbxref=Genbank:WP_221068520.1;Name=WP_221068520.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384795.1;locus_tag=VA249_RS01030;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_221068520.1;transl_table=11 NZ_AP024165.1 RefSeq gene 217501 218559 . - . ID=gene-VA249_RS01035;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=VA249_RS01035;old_locus_tag=VYA_01930 NZ_AP024165.1 Protein Homology CDS 217501 218559 . - 0 ID=cds-WP_221068521.1;Parent=gene-VA249_RS01035;Dbxref=Genbank:WP_221068521.1;Name=WP_221068521.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707927.1;locus_tag=VA249_RS01035;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_221068521.1;transl_table=11 NZ_AP024165.1 RefSeq gene 218556 219545 . - . ID=gene-VA249_RS01040;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=VA249_RS01040;old_locus_tag=VYA_01940 NZ_AP024165.1 Protein Homology CDS 218556 219545 . - 0 ID=cds-WP_221068522.1;Parent=gene-VA249_RS01040;Dbxref=Genbank:WP_221068522.1;Name=WP_221068522.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428209.1;locus_tag=VA249_RS01040;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_221068522.1;transl_table=11 NZ_AP024165.1 RefSeq gene 219656 220597 . - . ID=gene-VA249_RS01045;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=VA249_RS01045;old_locus_tag=VYA_01950 NZ_AP024165.1 Protein Homology CDS 219656 220597 . - 0 ID=cds-WP_221068523.1;Parent=gene-VA249_RS01045;Dbxref=Genbank:WP_221068523.1;Name=WP_221068523.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535473.1;locus_tag=VA249_RS01045;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_221068523.1;transl_table=11 NZ_AP024165.1 RefSeq gene 221521 223719 . - . ID=gene-VA249_RS01050;Name=VA249_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01050;old_locus_tag=VYA_01960 NZ_AP024165.1 Protein Homology CDS 221521 223719 . - 0 ID=cds-WP_221068524.1;Parent=gene-VA249_RS01050;Dbxref=Genbank:WP_221068524.1;Name=WP_221068524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005489436.1;locus_tag=VA249_RS01050;product=YjbH domain-containing protein;protein_id=WP_221068524.1;transl_table=11 NZ_AP024165.1 RefSeq gene 223716 224516 . - . ID=gene-VA249_RS01055;Name=VA249_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01055;old_locus_tag=VYA_01970 NZ_AP024165.1 Protein Homology CDS 223716 224516 . - 0 ID=cds-WP_221068525.1;Parent=gene-VA249_RS01055;Dbxref=Genbank:WP_221068525.1;Name=WP_221068525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535467.1;locus_tag=VA249_RS01055;product=capsule biosynthesis GfcC family protein;protein_id=WP_221068525.1;transl_table=11 NZ_AP024165.1 RefSeq gene 224513 225187 . - . ID=gene-VA249_RS01060;Name=VA249_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01060;old_locus_tag=VYA_01980 NZ_AP024165.1 Protein Homology CDS 224513 225187 . - 0 ID=cds-WP_221068526.1;Parent=gene-VA249_RS01060;Dbxref=Genbank:WP_221068526.1;Name=WP_221068526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634966.1;locus_tag=VA249_RS01060;product=YjbF family lipoprotein;protein_id=WP_221068526.1;transl_table=11 NZ_AP024165.1 RefSeq gene 225259 225483 . - . ID=gene-VA249_RS01065;Name=VA249_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01065 NZ_AP024165.1 Protein Homology CDS 225259 225483 . - 0 ID=cds-WP_221068527.1;Parent=gene-VA249_RS01065;Dbxref=Genbank:WP_221068527.1;Name=WP_221068527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698932.1;locus_tag=VA249_RS01065;product=hypothetical protein;protein_id=WP_221068527.1;transl_table=11 NZ_AP024165.1 RefSeq gene 226323 226853 . + . ID=gene-VA249_RS01070;Name=VA249_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01070;old_locus_tag=VYA_02000 NZ_AP024165.1 Protein Homology CDS 226323 226853 . + 0 ID=cds-WP_221068528.1;Parent=gene-VA249_RS01070;Dbxref=Genbank:WP_221068528.1;Name=WP_221068528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817207.1;locus_tag=VA249_RS01070;product=outer membrane beta-barrel protein;protein_id=WP_221068528.1;transl_table=11 NZ_AP024165.1 RefSeq gene 226914 229562 . + . ID=gene-VA249_RS01075;Name=VA249_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01075;old_locus_tag=VYA_02010 NZ_AP024165.1 Protein Homology CDS 226914 229562 . + 0 ID=cds-WP_221068529.1;Parent=gene-VA249_RS01075;Dbxref=Genbank:WP_221068529.1;Name=WP_221068529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005489498.1;locus_tag=VA249_RS01075;product=SLBB domain-containing protein;protein_id=WP_221068529.1;transl_table=11 NZ_AP024165.1 RefSeq gene 229654 230055 . + . ID=gene-VA249_RS01080;Name=VA249_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01080;old_locus_tag=VYA_02020 NZ_AP024165.1 Protein Homology CDS 229654 230055 . + 0 ID=cds-WP_221068530.1;Parent=gene-VA249_RS01080;Dbxref=Genbank:WP_221068530.1;Name=WP_221068530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002535590.1;locus_tag=VA249_RS01080;product=four helix bundle protein;protein_id=WP_221068530.1;transl_table=11 NZ_AP024165.1 RefSeq gene 230208 231203 . + . ID=gene-VA249_RS01085;Name=VA249_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01085;old_locus_tag=VYA_02030 NZ_AP024165.1 Protein Homology CDS 230208 231203 . + 0 ID=cds-WP_221068531.1;Parent=gene-VA249_RS01085;Dbxref=Genbank:WP_221068531.1;Name=WP_221068531.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462489.1;locus_tag=VA249_RS01085;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_221068531.1;transl_table=11 NZ_AP024165.1 RefSeq gene 231348 232400 . + . ID=gene-VA249_RS01090;Name=VA249_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01090;old_locus_tag=VYA_02040 NZ_AP024165.1 Protein Homology CDS 231348 232400 . + 0 ID=cds-WP_221068532.1;Parent=gene-VA249_RS01090;Dbxref=Genbank:WP_221068532.1;Name=WP_221068532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003807115.1;locus_tag=VA249_RS01090;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_221068532.1;transl_table=11 NZ_AP024165.1 RefSeq gene 232417 233691 . + . ID=gene-VA249_RS01095;Name=tviB;gbkey=Gene;gene=tviB;gene_biotype=protein_coding;locus_tag=VA249_RS01095;old_locus_tag=VYA_02050 NZ_AP024165.1 Protein Homology CDS 232417 233691 . + 0 ID=cds-WP_221068533.1;Parent=gene-VA249_RS01095;Dbxref=Genbank:WP_221068533.1;Name=WP_221068533.1;Ontology_term=GO:0000271,GO:0016491,GO:0051287;gbkey=CDS;gene=tviB;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010317126.1;locus_tag=VA249_RS01095;product=Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB;protein_id=WP_221068533.1;transl_table=11 NZ_AP024165.1 RefSeq gene 233738 234319 . + . ID=gene-VA249_RS01100;Name=VA249_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01100;old_locus_tag=VYA_02060 NZ_AP024165.1 Protein Homology CDS 233738 234319 . + 0 ID=cds-WP_221068534.1;Parent=gene-VA249_RS01100;Dbxref=Genbank:WP_221068534.1;Name=WP_221068534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074470.1;locus_tag=VA249_RS01100;product=acetyltransferase;protein_id=WP_221068534.1;transl_table=11 NZ_AP024165.1 RefSeq gene 234328 235404 . + . ID=gene-VA249_RS01105;Name=VA249_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01105;old_locus_tag=VYA_02070 NZ_AP024165.1 Protein Homology CDS 234328 235404 . + 0 ID=cds-WP_221068535.1;Parent=gene-VA249_RS01105;Dbxref=Genbank:WP_221068535.1;Name=WP_221068535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004742915.1;locus_tag=VA249_RS01105;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_221068535.1;transl_table=11 NZ_AP024165.1 RefSeq gene 235467 236828 . + . ID=gene-VA249_RS01110;Name=VA249_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01110;old_locus_tag=VYA_02080 NZ_AP024165.1 Protein Homology CDS 235467 236828 . + 0 ID=cds-WP_221068536.1;Parent=gene-VA249_RS01110;Dbxref=Genbank:WP_221068536.1;Name=WP_221068536.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=VA249_RS01110;product=oligosaccharide flippase family protein;protein_id=WP_221068536.1;transl_table=11 NZ_AP024165.1 RefSeq gene 236838 238355 . + . ID=gene-VA249_RS01115;Name=VA249_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01115;old_locus_tag=VYA_02090 NZ_AP024165.1 Protein Homology CDS 236838 238355 . + 0 ID=cds-WP_221068537.1;Parent=gene-VA249_RS01115;Dbxref=Genbank:WP_221068537.1;Name=WP_221068537.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012936.2;locus_tag=VA249_RS01115;product=asparagine synthase-related protein;protein_id=WP_221068537.1;transl_table=11 NZ_AP024165.1 RefSeq gene 239347 239649 . + . ID=gene-VA249_RS01120;Name=VA249_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01120;old_locus_tag=VYA_02100 NZ_AP024165.1 GeneMarkS-2+ CDS 239347 239649 . + 0 ID=cds-WP_221068538.1;Parent=gene-VA249_RS01120;Dbxref=Genbank:WP_221068538.1;Name=WP_221068538.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS01120;product=hypothetical protein;protein_id=WP_221068538.1;transl_table=11 NZ_AP024165.1 RefSeq gene 239637 240731 . + . ID=gene-VA249_RS01125;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=VA249_RS01125;old_locus_tag=VYA_02110 NZ_AP024165.1 Protein Homology CDS 239637 240731 . + 0 ID=cds-WP_221068539.1;Parent=gene-VA249_RS01125;Dbxref=Genbank:WP_221068539.1;Name=WP_221068539.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074475.1;locus_tag=VA249_RS01125;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_221068539.1;transl_table=11 NZ_AP024165.1 RefSeq gene 240721 241866 . + . ID=gene-VA249_RS01130;Name=VA249_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01130;old_locus_tag=VYA_02120 NZ_AP024165.1 Protein Homology CDS 240721 241866 . + 0 ID=cds-WP_221068540.1;Parent=gene-VA249_RS01130;Dbxref=Genbank:WP_221068540.1;Name=WP_221068540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=VA249_RS01130;product=glycosyltransferase;protein_id=WP_221068540.1;transl_table=11 NZ_AP024165.1 RefSeq gene 241868 243007 . + . ID=gene-VA249_RS01135;Name=VA249_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01135;old_locus_tag=VYA_02130 NZ_AP024165.1 Protein Homology CDS 241868 243007 . + 0 ID=cds-WP_221068541.1;Parent=gene-VA249_RS01135;Dbxref=Genbank:WP_221068541.1;Name=WP_221068541.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016145.2;locus_tag=VA249_RS01135;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_221068541.1;transl_table=11 NZ_AP024165.1 RefSeq gene 243004 244107 . + . ID=gene-VA249_RS01140;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=VA249_RS01140;old_locus_tag=VYA_02140 NZ_AP024165.1 Protein Homology CDS 243004 244107 . + 0 ID=cds-WP_221068542.1;Parent=gene-VA249_RS01140;Dbxref=Genbank:WP_221068542.1;Name=WP_221068542.1;Ontology_term=GO:0009252,GO:0008762;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: protein motif:HMM:TIGR00179.1;locus_tag=VA249_RS01140;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_221068542.1;transl_table=11 NZ_AP024165.1 RefSeq gene 244178 245281 . + . ID=gene-VA249_RS01145;Name=VA249_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01145;old_locus_tag=VYA_02150 NZ_AP024165.1 Protein Homology CDS 244178 245281 . + 0 ID=cds-WP_221068543.1;Parent=gene-VA249_RS01145;Dbxref=Genbank:WP_221068543.1;Name=WP_221068543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=VA249_RS01145;product=acyltransferase;protein_id=WP_221068543.1;transl_table=11 NZ_AP024165.1 RefSeq gene 245271 246032 . + . ID=gene-VA249_RS01150;Name=VA249_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01150;old_locus_tag=VYA_02160 NZ_AP024165.1 Protein Homology CDS 245271 246032 . + 0 ID=cds-WP_221068544.1;Parent=gene-VA249_RS01150;Dbxref=Genbank:WP_221068544.1;Name=WP_221068544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017063141.1;locus_tag=VA249_RS01150;product=glycosyltransferase family 2 protein;protein_id=WP_221068544.1;transl_table=11 NZ_AP024165.1 RefSeq gene 246029 246946 . + . ID=gene-VA249_RS01155;Name=VA249_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01155;old_locus_tag=VYA_02170 NZ_AP024165.1 Protein Homology CDS 246029 246946 . + 0 ID=cds-WP_221068545.1;Parent=gene-VA249_RS01155;Dbxref=Genbank:WP_221068545.1;Name=WP_221068545.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433957.1;locus_tag=VA249_RS01155;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_221068545.1;transl_table=11 NZ_AP024165.1 RefSeq gene 246950 247498 . + . ID=gene-VA249_RS01160;Name=VA249_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01160;old_locus_tag=VYA_02180 NZ_AP024165.1 Protein Homology CDS 246950 247498 . + 0 ID=cds-WP_221068546.1;Parent=gene-VA249_RS01160;Dbxref=Genbank:WP_221068546.1;Name=WP_221068546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010317076.1;locus_tag=VA249_RS01160;product=sugar transferase;protein_id=WP_221068546.1;transl_table=11 NZ_AP024165.1 RefSeq gene 247714 249663 . + . ID=gene-VA249_RS01165;Name=VA249_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01165;old_locus_tag=VYA_02190 NZ_AP024165.1 Protein Homology CDS 247714 249663 . + 0 ID=cds-WP_221068547.1;Parent=gene-VA249_RS01165;Dbxref=Genbank:WP_221068547.1;Name=WP_221068547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016787291.1;locus_tag=VA249_RS01165;product=polysaccharide biosynthesis protein;protein_id=WP_221068547.1;transl_table=11 NZ_AP024165.1 RefSeq gene 250137 251486 . - . ID=gene-VA249_RS01170;Name=VA249_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01170;old_locus_tag=VYA_02200 NZ_AP024165.1 Protein Homology CDS 250137 251486 . - 0 ID=cds-WP_221068548.1;Parent=gene-VA249_RS01170;Dbxref=Genbank:WP_221068548.1;Name=WP_221068548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817232.1;locus_tag=VA249_RS01170;product=MBL fold metallo-hydrolase;protein_id=WP_221068548.1;transl_table=11 NZ_AP024165.1 RefSeq gene 252361 253527 . + . ID=gene-VA249_RS01175;Name=VA249_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01175;old_locus_tag=VYA_02210 NZ_AP024165.1 Protein Homology CDS 252361 253527 . + 0 ID=cds-WP_221068549.1;Parent=gene-VA249_RS01175;Dbxref=Genbank:WP_221068549.1;Name=WP_221068549.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230643.1;locus_tag=VA249_RS01175;product=nucleotide sugar dehydrogenase;protein_id=WP_221068549.1;transl_table=11 NZ_AP024165.1 RefSeq gene 253596 254600 . + . ID=gene-VA249_RS01180;Name=VA249_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01180;old_locus_tag=VYA_02220 NZ_AP024165.1 Protein Homology CDS 253596 254600 . + 0 ID=cds-WP_221068550.1;Parent=gene-VA249_RS01180;Dbxref=Genbank:WP_221068550.1;Name=WP_221068550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016785058.1;locus_tag=VA249_RS01180;product=NAD-dependent epimerase;protein_id=WP_221068550.1;transl_table=11 NZ_AP024165.1 RefSeq gene 254665 254817 . + . ID=gene-VA249_RS01185;Name=VA249_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01185;old_locus_tag=VYA_02230 NZ_AP024165.1 GeneMarkS-2+ CDS 254665 254817 . + 0 ID=cds-WP_221068551.1;Parent=gene-VA249_RS01185;Dbxref=Genbank:WP_221068551.1;Name=WP_221068551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS01185;product=hypothetical protein;protein_id=WP_221068551.1;transl_table=11 NZ_AP024165.1 RefSeq gene 255190 255960 . - . ID=gene-VA249_RS01190;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=VA249_RS01190;old_locus_tag=VYA_02240 NZ_AP024165.1 Protein Homology CDS 255190 255960 . - 0 ID=cds-WP_128811859.1;Parent=gene-VA249_RS01190;Dbxref=Genbank:WP_128811859.1;Name=WP_128811859.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079322.1;locus_tag=VA249_RS01190;product=triose-phosphate isomerase;protein_id=WP_128811859.1;transl_table=11 NZ_AP024165.1 RefSeq gene 256234 256581 . + . ID=gene-VA249_RS01195;Name=VA249_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01195;old_locus_tag=VYA_02250 NZ_AP024165.1 Protein Homology CDS 256234 256581 . + 0 ID=cds-WP_221068552.1;Parent=gene-VA249_RS01195;Dbxref=Genbank:WP_221068552.1;Name=WP_221068552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008219643.1;locus_tag=VA249_RS01195;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_221068552.1;transl_table=11 NZ_AP024165.1 RefSeq gene 257239 257661 . + . ID=gene-VA249_RS01200;Name=VA249_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01200;old_locus_tag=VYA_02260 NZ_AP024165.1 Protein Homology CDS 257239 257661 . + 0 ID=cds-WP_221068553.1;Parent=gene-VA249_RS01200;Dbxref=Genbank:WP_221068553.1;Name=WP_221068553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528524.1;locus_tag=VA249_RS01200;product=DUF805 domain-containing protein;protein_id=WP_221068553.1;transl_table=11 NZ_AP024165.1 RefSeq gene 257883 258227 . - . ID=gene-VA249_RS01205;Name=VA249_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01205;old_locus_tag=VYA_02270 NZ_AP024165.1 Protein Homology CDS 257883 258227 . - 0 ID=cds-WP_221068554.1;Parent=gene-VA249_RS01205;Dbxref=Genbank:WP_221068554.1;Name=WP_221068554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428106.1;locus_tag=VA249_RS01205;product=DUF3135 domain-containing protein;protein_id=WP_221068554.1;transl_table=11 NZ_AP024165.1 RefSeq gene 258416 259042 . - . ID=gene-VA249_RS01210;Name=VA249_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01210;old_locus_tag=VYA_02280 NZ_AP024165.1 Protein Homology CDS 258416 259042 . - 0 ID=cds-WP_221068555.1;Parent=gene-VA249_RS01210;Dbxref=Genbank:WP_221068555.1;Name=WP_221068555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446749.1;locus_tag=VA249_RS01210;product=transcriptional regulator;protein_id=WP_221068555.1;transl_table=11 NZ_AP024165.1 RefSeq gene 259216 260223 . - . ID=gene-VA249_RS01215;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=VA249_RS01215;old_locus_tag=VYA_02290 NZ_AP024165.1 Protein Homology CDS 259216 260223 . - 0 ID=cds-WP_221068556.1;Parent=gene-VA249_RS01215;Dbxref=Genbank:WP_221068556.1;Name=WP_221068556.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001887310.1;locus_tag=VA249_RS01215;product=class II fructose-bisphosphatase;protein_id=WP_221068556.1;transl_table=11 NZ_AP024165.1 RefSeq gene 260569 260811 . + . ID=gene-VA249_RS01220;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=VA249_RS01220;old_locus_tag=VYA_02300 NZ_AP024165.1 Protein Homology CDS 260569 260811 . + 0 ID=cds-WP_211915513.1;Parent=gene-VA249_RS01220;Dbxref=Genbank:WP_211915513.1;Name=WP_211915513.1;Ontology_term=GO:0043093,GO:0090529,GO:0005737;gbkey=CDS;gene=zapB;go_component=cytoplasm|0005737||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007389.1;locus_tag=VA249_RS01220;product=cell division protein ZapB;protein_id=WP_211915513.1;transl_table=11 NZ_AP024165.1 RefSeq gene 261450 261956 . - . ID=gene-VA249_RS01225;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=VA249_RS01225;old_locus_tag=VYA_02310 NZ_AP024165.1 Protein Homology CDS 261450 261956 . - 0 ID=cds-WP_128811845.1;Parent=gene-VA249_RS01225;Dbxref=Genbank:WP_128811845.1;Name=WP_128811845.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457192.1;locus_tag=VA249_RS01225;product=ribonuclease E activity regulator RraA;protein_id=WP_128811845.1;transl_table=11 NZ_AP024165.1 RefSeq gene 262033 262950 . - . ID=gene-VA249_RS01230;Name=VA249_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01230;old_locus_tag=VYA_02320 NZ_AP024165.1 Protein Homology CDS 262033 262950 . - 0 ID=cds-WP_221068557.1;Parent=gene-VA249_RS01230;Dbxref=Genbank:WP_221068557.1;Name=WP_221068557.1;Ontology_term=GO:0009234,GO:0046428,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017061151.1;locus_tag=VA249_RS01230;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_221068557.1;transl_table=11 NZ_AP024165.1 RefSeq gene 263241 264572 . - . ID=gene-VA249_RS01235;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=VA249_RS01235;old_locus_tag=VYA_02330 NZ_AP024165.1 Protein Homology CDS 263241 264572 . - 0 ID=cds-WP_221068558.1;Parent=gene-VA249_RS01235;Dbxref=Genbank:WP_221068558.1;Name=WP_221068558.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830204.1;locus_tag=VA249_RS01235;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_221068558.1;transl_table=11 NZ_AP024165.1 RefSeq gene 264602 265153 . - . ID=gene-VA249_RS01240;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=VA249_RS01240;old_locus_tag=VYA_02340 NZ_AP024165.1 Protein Homology CDS 264602 265153 . - 0 ID=cds-WP_038864894.1;Parent=gene-VA249_RS01240;Dbxref=Genbank:WP_038864894.1;Name=WP_038864894.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844179.1;locus_tag=VA249_RS01240;product=ATP-dependent protease subunit HslV;protein_id=WP_038864894.1;transl_table=11 NZ_AP024165.1 RefSeq gene 265319 265861 . - . ID=gene-VA249_RS01245;Name=VA249_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01245;old_locus_tag=VYA_02350 NZ_AP024165.1 Protein Homology CDS 265319 265861 . - 0 ID=cds-WP_221068559.1;Parent=gene-VA249_RS01245;Dbxref=Genbank:WP_221068559.1;Name=WP_221068559.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005496929.1;locus_tag=VA249_RS01245;product=SPOR domain-containing protein;protein_id=WP_221068559.1;transl_table=11 NZ_AP024165.1 RefSeq gene 266002 267006 . - . ID=gene-VA249_RS01250;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=VA249_RS01250;old_locus_tag=VYA_02360 NZ_AP024165.1 Protein Homology CDS 266002 267006 . - 0 ID=cds-WP_221068560.1;Parent=gene-VA249_RS01250;Dbxref=Genbank:WP_221068560.1;Name=WP_221068560.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429951.1;locus_tag=VA249_RS01250;product=DNA-binding transcriptional regulator CytR;protein_id=WP_221068560.1;transl_table=11 NZ_AP024165.1 RefSeq gene 267211 269412 . - . ID=gene-VA249_RS01255;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=VA249_RS01255;old_locus_tag=VYA_02370 NZ_AP024165.1 Protein Homology CDS 267211 269412 . - 0 ID=cds-WP_221068561.1;Parent=gene-VA249_RS01255;Dbxref=Genbank:WP_221068561.1;Name=WP_221068561.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017630923.1;locus_tag=VA249_RS01255;product=primosomal protein N';protein_id=WP_221068561.1;transl_table=11 NZ_AP024165.1 RefSeq gene 269710 269931 . + . ID=gene-VA249_RS01260;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=VA249_RS01260;old_locus_tag=VYA_02380 NZ_AP024165.1 Protein Homology CDS 269710 269931 . + 0 ID=cds-WP_128811835.1;Parent=gene-VA249_RS01260;Dbxref=Genbank:WP_128811835.1;Name=WP_128811835.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379546.1;locus_tag=VA249_RS01260;product=50S ribosomal protein L31;protein_id=WP_128811835.1;transl_table=11 NZ_AP024165.1 RefSeq gene 270409 270720 . + . ID=gene-VA249_RS01265;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=VA249_RS01265;old_locus_tag=VYA_02390 NZ_AP024165.1 Protein Homology CDS 270409 270720 . + 0 ID=cds-WP_004410492.1;Parent=gene-VA249_RS01265;Dbxref=Genbank:WP_004410492.1;Name=WP_004410492.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=VA249_RS01265;product=30S ribosomal protein S10;protein_id=WP_004410492.1;transl_table=11 NZ_AP024165.1 RefSeq gene 270735 271364 . + . ID=gene-VA249_RS01270;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=VA249_RS01270;old_locus_tag=VYA_02400 NZ_AP024165.1 Protein Homology CDS 270735 271364 . + 0 ID=cds-WP_211915507.1;Parent=gene-VA249_RS01270;Dbxref=Genbank:WP_211915507.1;Name=WP_211915507.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=VA249_RS01270;product=50S ribosomal protein L3;protein_id=WP_211915507.1;transl_table=11 NZ_AP024165.1 RefSeq gene 271382 271984 . + . ID=gene-VA249_RS01275;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=VA249_RS01275;old_locus_tag=VYA_02410 NZ_AP024165.1 Protein Homology CDS 271382 271984 . + 0 ID=cds-WP_211915506.1;Parent=gene-VA249_RS01275;Dbxref=Genbank:WP_211915506.1;Name=WP_211915506.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=VA249_RS01275;product=50S ribosomal protein L4;protein_id=WP_211915506.1;transl_table=11 NZ_AP024165.1 RefSeq gene 271981 272283 . + . ID=gene-VA249_RS01280;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=VA249_RS01280;old_locus_tag=VYA_02420 NZ_AP024165.1 Protein Homology CDS 271981 272283 . + 0 ID=cds-WP_004398471.1;Parent=gene-VA249_RS01280;Dbxref=Genbank:WP_004398471.1;Name=WP_004398471.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312210.1;locus_tag=VA249_RS01280;product=50S ribosomal protein L23;protein_id=WP_004398471.1;transl_table=11 NZ_AP024165.1 RefSeq gene 272299 273123 . + . ID=gene-VA249_RS01285;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=VA249_RS01285;old_locus_tag=VYA_02430 NZ_AP024165.1 Protein Homology CDS 272299 273123 . + 0 ID=cds-WP_128811830.1;Parent=gene-VA249_RS01285;Dbxref=Genbank:WP_128811830.1;Name=WP_128811830.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005417230.1;locus_tag=VA249_RS01285;product=50S ribosomal protein L2;protein_id=WP_128811830.1;transl_table=11 NZ_AP024165.1 RefSeq gene 273145 273423 . + . ID=gene-VA249_RS01290;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=VA249_RS01290;old_locus_tag=VYA_02440 NZ_AP024165.1 Protein Homology CDS 273145 273423 . + 0 ID=cds-WP_011078827.1;Parent=gene-VA249_RS01290;Dbxref=Genbank:WP_011078827.1;Name=WP_011078827.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=VA249_RS01290;product=30S ribosomal protein S19;protein_id=WP_011078827.1;transl_table=11 NZ_AP024165.1 RefSeq gene 273434 273766 . + . ID=gene-VA249_RS01295;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=VA249_RS01295;old_locus_tag=VYA_02450 NZ_AP024165.1 Protein Homology CDS 273434 273766 . + 0 ID=cds-WP_005528535.1;Parent=gene-VA249_RS01295;Dbxref=Genbank:WP_005528535.1;Name=WP_005528535.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012549155.1;locus_tag=VA249_RS01295;product=50S ribosomal protein L22;protein_id=WP_005528535.1;transl_table=11 NZ_AP024165.1 RefSeq gene 273785 274483 . + . ID=gene-VA249_RS01300;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=VA249_RS01300;old_locus_tag=VYA_02460 NZ_AP024165.1 Protein Homology CDS 273785 274483 . + 0 ID=cds-WP_099079985.1;Parent=gene-VA249_RS01300;Dbxref=Genbank:WP_099079985.1;Name=WP_099079985.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1;locus_tag=VA249_RS01300;product=30S ribosomal protein S3;protein_id=WP_099079985.1;transl_table=11 NZ_AP024165.1 RefSeq gene 274495 274905 . + . ID=gene-VA249_RS01305;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=VA249_RS01305;old_locus_tag=VYA_02470 NZ_AP024165.1 Protein Homology CDS 274495 274905 . + 0 ID=cds-WP_099079984.1;Parent=gene-VA249_RS01305;Dbxref=Genbank:WP_099079984.1;Name=WP_099079984.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=VA249_RS01305;product=50S ribosomal protein L16;protein_id=WP_099079984.1;transl_table=11 NZ_AP024165.1 RefSeq gene 274905 275096 . + . ID=gene-VA249_RS01310;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=VA249_RS01310;old_locus_tag=VYA_02480 NZ_AP024165.1 Protein Homology CDS 274905 275096 . + 0 ID=cds-WP_004410456.1;Parent=gene-VA249_RS01310;Dbxref=Genbank:WP_004410456.1;Name=WP_004410456.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647192.1;locus_tag=VA249_RS01310;product=50S ribosomal protein L29;protein_id=WP_004410456.1;transl_table=11 NZ_AP024165.1 RefSeq gene 275096 275350 . + . ID=gene-VA249_RS01315;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=VA249_RS01315;old_locus_tag=VYA_02490 NZ_AP024165.1 Protein Homology CDS 275096 275350 . + 0 ID=cds-WP_211915505.1;Parent=gene-VA249_RS01315;Dbxref=Genbank:WP_211915505.1;Name=WP_211915505.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312203.1;locus_tag=VA249_RS01315;product=30S ribosomal protein S17;protein_id=WP_211915505.1;transl_table=11 NZ_AP024165.1 RefSeq gene 275514 275885 . + . ID=gene-VA249_RS01320;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=VA249_RS01320;old_locus_tag=VYA_02500 NZ_AP024165.1 Protein Homology CDS 275514 275885 . + 0 ID=cds-WP_128811826.1;Parent=gene-VA249_RS01320;Dbxref=Genbank:WP_128811826.1;Name=WP_128811826.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=VA249_RS01320;product=50S ribosomal protein L14;protein_id=WP_128811826.1;transl_table=11 NZ_AP024165.1 RefSeq gene 275899 276216 . + . ID=gene-VA249_RS01325;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=VA249_RS01325;old_locus_tag=VYA_02510 NZ_AP024165.1 Protein Homology CDS 275899 276216 . + 0 ID=cds-WP_096994896.1;Parent=gene-VA249_RS01325;Dbxref=Genbank:WP_096994896.1;Name=WP_096994896.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729178.1;locus_tag=VA249_RS01325;product=50S ribosomal protein L24;protein_id=WP_096994896.1;transl_table=11 NZ_AP024165.1 RefSeq gene 276240 276779 . + . ID=gene-VA249_RS01330;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=VA249_RS01330;old_locus_tag=VYA_02520 NZ_AP024165.1 Protein Homology CDS 276240 276779 . + 0 ID=cds-WP_004745887.1;Parent=gene-VA249_RS01330;Dbxref=Genbank:WP_004745887.1;Name=WP_004745887.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=VA249_RS01330;product=50S ribosomal protein L5;protein_id=WP_004745887.1;transl_table=11 NZ_AP024165.1 RefSeq gene 276797 277102 . + . ID=gene-VA249_RS01335;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=VA249_RS01335;old_locus_tag=VYA_02530 NZ_AP024165.1 Protein Homology CDS 276797 277102 . + 0 ID=cds-WP_211915504.1;Parent=gene-VA249_RS01335;Dbxref=Genbank:WP_211915504.1;Name=WP_211915504.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312199.1;locus_tag=VA249_RS01335;product=30S ribosomal protein S14;protein_id=WP_211915504.1;transl_table=11 NZ_AP024165.1 RefSeq gene 277132 277524 . + . ID=gene-VA249_RS01340;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=VA249_RS01340;old_locus_tag=VYA_02540 NZ_AP024165.1 Protein Homology CDS 277132 277524 . + 0 ID=cds-WP_128811822.1;Parent=gene-VA249_RS01340;Dbxref=Genbank:WP_128811822.1;Name=WP_128811822.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=VA249_RS01340;product=30S ribosomal protein S8;protein_id=WP_128811822.1;transl_table=11 NZ_AP024165.1 RefSeq gene 277538 278071 . + . ID=gene-VA249_RS01345;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=VA249_RS01345;old_locus_tag=VYA_02550 NZ_AP024165.1 Protein Homology CDS 277538 278071 . + 0 ID=cds-WP_211915503.1;Parent=gene-VA249_RS01345;Dbxref=Genbank:WP_211915503.1;Name=WP_211915503.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=VA249_RS01345;product=50S ribosomal protein L6;protein_id=WP_211915503.1;transl_table=11 NZ_AP024165.1 RefSeq gene 278081 278434 . + . ID=gene-VA249_RS01350;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=VA249_RS01350;old_locus_tag=VYA_02560 NZ_AP024165.1 Protein Homology CDS 278081 278434 . + 0 ID=cds-WP_021451677.1;Parent=gene-VA249_RS01350;Dbxref=Genbank:WP_021451677.1;Name=WP_021451677.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=VA249_RS01350;product=50S ribosomal protein L18;protein_id=WP_021451677.1;transl_table=11 NZ_AP024165.1 RefSeq gene 278449 278952 . + . ID=gene-VA249_RS01355;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=VA249_RS01355;old_locus_tag=VYA_02570 NZ_AP024165.1 Protein Homology CDS 278449 278952 . + 0 ID=cds-WP_021708925.1;Parent=gene-VA249_RS01355;Dbxref=Genbank:WP_021708925.1;Name=WP_021708925.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736754.1;locus_tag=VA249_RS01355;product=30S ribosomal protein S5;protein_id=WP_021708925.1;transl_table=11 NZ_AP024165.1 RefSeq gene 278960 279136 . + . ID=gene-VA249_RS01360;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=VA249_RS01360;old_locus_tag=VYA_02580 NZ_AP024165.1 Protein Homology CDS 278960 279136 . + 0 ID=cds-WP_000201159.1;Parent=gene-VA249_RS01360;Dbxref=Genbank:WP_000201159.1;Name=WP_000201159.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=VA249_RS01360;product=50S ribosomal protein L30;protein_id=WP_000201159.1;transl_table=11 NZ_AP024165.1 RefSeq gene 279142 279576 . + . ID=gene-VA249_RS01365;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=VA249_RS01365;old_locus_tag=VYA_02590 NZ_AP024165.1 Protein Homology CDS 279142 279576 . + 0 ID=cds-WP_128811818.1;Parent=gene-VA249_RS01365;Dbxref=Genbank:WP_128811818.1;Name=WP_128811818.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017026376.1;locus_tag=VA249_RS01365;product=50S ribosomal protein L15;protein_id=WP_128811818.1;transl_table=11 NZ_AP024165.1 RefSeq gene 279597 280931 . + . ID=gene-VA249_RS01370;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=VA249_RS01370;old_locus_tag=VYA_02600 NZ_AP024165.1 Protein Homology CDS 279597 280931 . + 0 ID=cds-WP_211915502.1;Parent=gene-VA249_RS01370;Dbxref=Genbank:WP_211915502.1;Name=WP_211915502.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=VA249_RS01370;product=preprotein translocase subunit SecY;protein_id=WP_211915502.1;transl_table=11 NZ_AP024165.1 RefSeq gene 280970 281086 . + . ID=gene-VA249_RS01375;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=VA249_RS01375 NZ_AP024165.1 Protein Homology CDS 280970 281086 . + 0 ID=cds-WP_042478686.1;Parent=gene-VA249_RS01375;Dbxref=Genbank:WP_042478686.1;Name=WP_042478686.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=VA249_RS01375;product=50S ribosomal protein L36;protein_id=WP_042478686.1;transl_table=11 NZ_AP024165.1 RefSeq gene 281236 281592 . + . ID=gene-VA249_RS01380;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=VA249_RS01380;old_locus_tag=VYA_02610 NZ_AP024165.1 Protein Homology CDS 281236 281592 . + 0 ID=cds-WP_005450559.1;Parent=gene-VA249_RS01380;Dbxref=Genbank:WP_005450559.1;Name=WP_005450559.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=VA249_RS01380;product=30S ribosomal protein S13;protein_id=WP_005450559.1;transl_table=11 NZ_AP024165.1 RefSeq gene 281611 282000 . + . ID=gene-VA249_RS01385;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=VA249_RS01385;old_locus_tag=VYA_02620 NZ_AP024165.1 Protein Homology CDS 281611 282000 . + 0 ID=cds-WP_128811815.1;Parent=gene-VA249_RS01385;Dbxref=Genbank:WP_128811815.1;Name=WP_128811815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=VA249_RS01385;product=30S ribosomal protein S11;protein_id=WP_128811815.1;transl_table=11 NZ_AP024165.1 RefSeq gene 282028 282648 . + . ID=gene-VA249_RS01390;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=VA249_RS01390;old_locus_tag=VYA_02630 NZ_AP024165.1 Protein Homology CDS 282028 282648 . + 0 ID=cds-WP_014230671.1;Parent=gene-VA249_RS01390;Dbxref=Genbank:WP_014230671.1;Name=WP_014230671.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=VA249_RS01390;product=30S ribosomal protein S4;protein_id=WP_014230671.1;transl_table=11 NZ_AP024165.1 RefSeq gene 282672 283664 . + . ID=gene-VA249_RS01395;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=VA249_RS01395;old_locus_tag=VYA_02640 NZ_AP024165.1 Protein Homology CDS 282672 283664 . + 0 ID=cds-WP_010445384.1;Parent=gene-VA249_RS01395;Dbxref=Genbank:WP_010445384.1;Name=WP_010445384.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=VA249_RS01395;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_010445384.1;transl_table=11 NZ_AP024165.1 RefSeq gene 283691 284071 . + . ID=gene-VA249_RS01400;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=VA249_RS01400;old_locus_tag=VYA_02650 NZ_AP024165.1 Protein Homology CDS 283691 284071 . + 0 ID=cds-WP_005383141.1;Parent=gene-VA249_RS01400;Dbxref=Genbank:WP_005383141.1;Name=WP_005383141.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1;locus_tag=VA249_RS01400;product=50S ribosomal protein L17;protein_id=WP_005383141.1;transl_table=11 NZ_AP024165.1 RefSeq gene 284334 284813 . - . ID=gene-VA249_RS01405;Name=VA249_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01405;old_locus_tag=VYA_02660 NZ_AP024165.1 Protein Homology CDS 284334 284813 . - 0 ID=cds-WP_221069774.1;Parent=gene-VA249_RS01405;Dbxref=Genbank:WP_221069774.1;Name=WP_221069774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392373.1;locus_tag=VA249_RS01405;product=DUF2780 domain-containing protein;protein_id=WP_221069774.1;transl_table=11 NZ_AP024165.1 RefSeq gene 284928 285548 . - . ID=gene-VA249_RS01410;Name=VA249_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01410;old_locus_tag=VYA_02670 NZ_AP024165.1 Protein Homology CDS 284928 285548 . - 0 ID=cds-WP_211915499.1;Parent=gene-VA249_RS01410;Dbxref=Genbank:WP_211915499.1;Name=WP_211915499.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019282418.1;locus_tag=VA249_RS01410;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_211915499.1;transl_table=11 NZ_AP024165.1 RefSeq gene 285781 286374 . + . ID=gene-VA249_RS01415;Name=VA249_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01415;old_locus_tag=VYA_02680 NZ_AP024165.1 Protein Homology CDS 285781 286374 . + 0 ID=cds-WP_221068562.1;Parent=gene-VA249_RS01415;Dbxref=Genbank:WP_221068562.1;Name=WP_221068562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196522.1;locus_tag=VA249_RS01415;product=lysine transporter LysM;protein_id=WP_221068562.1;transl_table=11 NZ_AP024165.1 RefSeq gene 286459 286929 . - . ID=gene-VA249_RS01420;Name=VA249_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01420;old_locus_tag=VYA_02690 NZ_AP024165.1 Protein Homology CDS 286459 286929 . - 0 ID=cds-WP_128811807.1;Parent=gene-VA249_RS01420;Dbxref=Genbank:WP_128811807.1;Name=WP_128811807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196524.1;locus_tag=VA249_RS01420;product=GNAT family N-acetyltransferase;protein_id=WP_128811807.1;transl_table=11 NZ_AP024165.1 RefSeq gene 287076 288455 . + . ID=gene-VA249_RS01425;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=VA249_RS01425;old_locus_tag=VYA_02700 NZ_AP024165.1 Protein Homology CDS 287076 288455 . + 0 ID=cds-WP_128811805.1;Parent=gene-VA249_RS01425;Dbxref=Genbank:WP_128811805.1;Name=WP_128811805.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190035.1;locus_tag=VA249_RS01425;product=ATP-dependent RNA helicase DbpA;protein_id=WP_128811805.1;transl_table=11 NZ_AP024165.1 RefSeq gene 288550 289131 . - . ID=gene-VA249_RS01430;Name=VA249_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01430;old_locus_tag=VYA_02710 NZ_AP024165.1 Protein Homology CDS 288550 289131 . - 0 ID=cds-WP_221068563.1;Parent=gene-VA249_RS01430;Dbxref=Genbank:WP_221068563.1;Name=WP_221068563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843280.1;locus_tag=VA249_RS01430;product=Crp/Fnr family transcriptional regulator;protein_id=WP_221068563.1;transl_table=11 NZ_AP024165.1 RefSeq gene 289228 291189 . - . ID=gene-VA249_RS01435;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=VA249_RS01435;old_locus_tag=VYA_02720 NZ_AP024165.1 Protein Homology CDS 289228 291189 . - 0 ID=cds-WP_221068564.1;Parent=gene-VA249_RS01435;Dbxref=Genbank:WP_221068564.1;Name=WP_221068564.1;Ontology_term=GO:0006139,GO:0008663,GO:0009897,GO:0030288;gbkey=CDS;gene=cpdB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005489602.1;locus_tag=VA249_RS01435;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_221068564.1;transl_table=11 NZ_AP024165.1 RefSeq gene 291484 292356 . + . ID=gene-VA249_RS01440;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=VA249_RS01440;old_locus_tag=VYA_02730 NZ_AP024165.1 Protein Homology CDS 291484 292356 . + 0 ID=cds-WP_221068565.1;Parent=gene-VA249_RS01440;Dbxref=Genbank:WP_221068565.1;Name=WP_221068565.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633443.1;locus_tag=VA249_RS01440;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_221068565.1;transl_table=11 NZ_AP024165.1 RefSeq gene 292496 293404 . + . ID=gene-VA249_RS01445;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=VA249_RS01445;old_locus_tag=VYA_02740 NZ_AP024165.1 Protein Homology CDS 292496 293404 . + 0 ID=cds-WP_128811799.1;Parent=gene-VA249_RS01445;Dbxref=Genbank:WP_128811799.1;Name=WP_128811799.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004738750.1;locus_tag=VA249_RS01445;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_128811799.1;transl_table=11 NZ_AP024165.1 RefSeq gene 293423 294853 . + . ID=gene-VA249_RS01450;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=VA249_RS01450;old_locus_tag=VYA_02750 NZ_AP024165.1 Protein Homology CDS 293423 294853 . + 0 ID=cds-WP_221068566.1;Parent=gene-VA249_RS01450;Dbxref=Genbank:WP_221068566.1;Name=WP_221068566.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528550.1;locus_tag=VA249_RS01450;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_221068566.1;transl_table=11 NZ_AP024165.1 RefSeq gene 295025 296749 . + . ID=gene-VA249_RS01455;Name=VA249_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01455;old_locus_tag=VYA_02760 NZ_AP024165.1 Protein Homology CDS 295025 296749 . + 0 ID=cds-WP_128811795.1;Parent=gene-VA249_RS01455;Dbxref=Genbank:WP_128811795.1;Name=WP_128811795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410374.1;locus_tag=VA249_RS01455;product=SLC13 family permease;protein_id=WP_128811795.1;transl_table=11 NZ_AP024165.1 RefSeq gene 296774 297391 . + . ID=gene-VA249_RS01460;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=VA249_RS01460;old_locus_tag=VYA_02770 NZ_AP024165.1 Protein Homology CDS 296774 297391 . + 0 ID=cds-WP_128811793.1;Parent=gene-VA249_RS01460;Dbxref=Genbank:WP_128811793.1;Name=WP_128811793.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430514.1;locus_tag=VA249_RS01460;product=adenylyl-sulfate kinase;protein_id=WP_128811793.1;transl_table=11 NZ_AP024165.1 RefSeq gene 297482 298387 . - . ID=gene-VA249_RS01465;Name=VA249_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01465;old_locus_tag=VYA_02780 NZ_AP024165.1 Protein Homology CDS 297482 298387 . - 0 ID=cds-WP_128811791.1;Parent=gene-VA249_RS01465;Dbxref=Genbank:WP_128811791.1;Name=WP_128811791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196530.1;locus_tag=VA249_RS01465;product=TIGR03899 family protein;protein_id=WP_128811791.1;transl_table=11 NZ_AP024165.1 RefSeq gene 298824 299318 . - . ID=gene-VA249_RS01470;Name=VA249_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01470;old_locus_tag=VYA_02790 NZ_AP024165.1 Protein Homology CDS 298824 299318 . - 0 ID=cds-WP_128811789.1;Parent=gene-VA249_RS01470;Dbxref=Genbank:WP_128811789.1;Name=WP_128811789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196531.1;locus_tag=VA249_RS01470;product=DUF3299 domain-containing protein;protein_id=WP_128811789.1;transl_table=11 NZ_AP024165.1 RefSeq gene 299321 300580 . - . ID=gene-VA249_RS01475;Name=VA249_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01475;old_locus_tag=VYA_02800 NZ_AP024165.1 Protein Homology CDS 299321 300580 . - 0 ID=cds-WP_221068567.1;Parent=gene-VA249_RS01475;Dbxref=Genbank:WP_221068567.1;Name=WP_221068567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820287.1;locus_tag=VA249_RS01475;product=ABC transporter permease;protein_id=WP_221068567.1;transl_table=11 NZ_AP024165.1 RefSeq gene 300577 301299 . - . ID=gene-VA249_RS01480;Name=VA249_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01480;old_locus_tag=VYA_02810 NZ_AP024165.1 Protein Homology CDS 300577 301299 . - 0 ID=cds-WP_221068568.1;Parent=gene-VA249_RS01480;Dbxref=Genbank:WP_221068568.1;Name=WP_221068568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196532.1;locus_tag=VA249_RS01480;product=ABC transporter ATP-binding protein;protein_id=WP_221068568.1;transl_table=11 NZ_AP024165.1 RefSeq gene 301383 302114 . - . ID=gene-VA249_RS01485;Name=VA249_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01485;old_locus_tag=VYA_02820 NZ_AP024165.1 Protein Homology CDS 301383 302114 . - 0 ID=cds-WP_221068569.1;Parent=gene-VA249_RS01485;Dbxref=Genbank:WP_221068569.1;Name=WP_221068569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430523.1;locus_tag=VA249_RS01485;product=DUF2796 domain-containing protein;protein_id=WP_221068569.1;transl_table=11 NZ_AP024165.1 RefSeq gene 302209 302508 . - . ID=gene-VA249_RS01490;Name=VA249_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01490 NZ_AP024165.1 Protein Homology CDS 302209 302508 . - 0 ID=cds-WP_221068570.1;Parent=gene-VA249_RS01490;Dbxref=Genbank:WP_221068570.1;Name=WP_221068570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430545.1;locus_tag=VA249_RS01490;product=DUF2607 family protein;protein_id=WP_221068570.1;transl_table=11 NZ_AP024165.1 RefSeq gene 302759 303310 . - . ID=gene-VA249_RS01495;Name=VA249_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01495;old_locus_tag=VYA_02840 NZ_AP024165.1 Protein Homology CDS 302759 303310 . - 0 ID=cds-WP_221068571.1;Parent=gene-VA249_RS01495;Dbxref=Genbank:WP_221068571.1;Name=WP_221068571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528563.1;locus_tag=VA249_RS01495;product=YtfJ family protein;protein_id=WP_221068571.1;transl_table=11 NZ_AP024165.1 RefSeq gene 303524 303724 . + . ID=gene-VA249_RS01500;Name=VA249_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01500;old_locus_tag=VYA_02850 NZ_AP024165.1 Protein Homology CDS 303524 303724 . + 0 ID=cds-WP_211915482.1;Parent=gene-VA249_RS01500;Dbxref=Genbank:WP_211915482.1;Name=WP_211915482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450516.1;locus_tag=VA249_RS01500;product=DUF1107 family protein;protein_id=WP_211915482.1;transl_table=11 NZ_AP024165.1 RefSeq gene 303801 304439 . - . ID=gene-VA249_RS01505;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=VA249_RS01505;old_locus_tag=VYA_02860 NZ_AP024165.1 Protein Homology CDS 303801 304439 . - 0 ID=cds-WP_221068572.1;Parent=gene-VA249_RS01505;Dbxref=Genbank:WP_221068572.1;Name=WP_221068572.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013855952.1;locus_tag=VA249_RS01505;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_221068572.1;transl_table=11 NZ_AP024165.1 RefSeq gene 304607 306319 . + . ID=gene-VA249_RS01510;Name=VA249_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01510;old_locus_tag=VYA_02870 NZ_AP024165.1 Protein Homology CDS 304607 306319 . + 0 ID=cds-WP_221068573.1;Parent=gene-VA249_RS01510;Dbxref=Genbank:WP_221068573.1;Name=WP_221068573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196536.1;locus_tag=VA249_RS01510;product=autotransporter assembly complex protein TamA;protein_id=WP_221068573.1;transl_table=11 NZ_AP024165.1 RefSeq gene 306319 310083 . + . ID=gene-VA249_RS01515;Name=VA249_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01515;old_locus_tag=VYA_02880 NZ_AP024165.1 Protein Homology CDS 306319 310083 . + 0 ID=cds-WP_221069777.1;Parent=gene-VA249_RS01515;Dbxref=Genbank:WP_221069777.1;Name=WP_221069777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817247.1;locus_tag=VA249_RS01515;product=translocation/assembly module TamB;protein_id=WP_221069777.1;transl_table=11 NZ_AP024165.1 RefSeq gene 310112 310459 . + . ID=gene-VA249_RS01520;Name=VA249_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01520;old_locus_tag=VYA_02890 NZ_AP024165.1 Protein Homology CDS 310112 310459 . + 0 ID=cds-WP_211915479.1;Parent=gene-VA249_RS01520;Dbxref=Genbank:WP_211915479.1;Name=WP_211915479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843298.1;locus_tag=VA249_RS01520;product=gamma-glutamylcyclotransferase;protein_id=WP_211915479.1;transl_table=11 NZ_AP024165.1 RefSeq gene 310558 311088 . - . ID=gene-VA249_RS01525;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=VA249_RS01525;old_locus_tag=VYA_02900 NZ_AP024165.1 Protein Homology CDS 310558 311088 . - 0 ID=cds-WP_221068574.1;Parent=gene-VA249_RS01525;Dbxref=Genbank:WP_221068574.1;Name=WP_221068574.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454643.1;locus_tag=VA249_RS01525;product=inorganic diphosphatase;protein_id=WP_221068574.1;transl_table=11 NZ_AP024165.1 RefSeq gene 311213 312226 . - . ID=gene-VA249_RS01530;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=VA249_RS01530;old_locus_tag=VYA_02910 NZ_AP024165.1 Protein Homology CDS 311213 312226 . - 0 ID=cds-WP_221068575.1;Parent=gene-VA249_RS01530;Dbxref=Genbank:WP_221068575.1;Name=WP_221068575.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335825.1;locus_tag=VA249_RS01530;product=class 1 fructose-bisphosphatase;protein_id=WP_221068575.1;transl_table=11 NZ_AP024165.1 RefSeq gene 312538 313896 . + . ID=gene-VA249_RS01535;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=VA249_RS01535;old_locus_tag=VYA_02920 NZ_AP024165.1 Protein Homology CDS 312538 313896 . + 0 ID=cds-WP_221068576.1;Parent=gene-VA249_RS01535;Dbxref=Genbank:WP_221068576.1;Name=WP_221068576.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820280.1;locus_tag=VA249_RS01535;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_221068576.1;transl_table=11 NZ_AP024165.1 RefSeq gene 313906 314538 . + . ID=gene-VA249_RS01540;Name=VA249_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01540;old_locus_tag=VYA_02930 NZ_AP024165.1 Protein Homology CDS 313906 314538 . + 0 ID=cds-WP_221068577.1;Parent=gene-VA249_RS01540;Dbxref=Genbank:WP_221068577.1;Name=WP_221068577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230700.1;locus_tag=VA249_RS01540;product=UbiX family flavin prenyltransferase;protein_id=WP_221068577.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 314576 314724 . + . ID=id-NZ_AP024165.1:314576..314724;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 314794 315786 . + . ID=gene-VA249_RS01545;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=VA249_RS01545;old_locus_tag=VYA_02940 NZ_AP024165.1 Protein Homology CDS 314794 315786 . + 0 ID=cds-WP_221068578.1;Parent=gene-VA249_RS01545;Dbxref=Genbank:WP_221068578.1;Name=WP_221068578.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005485357.1;locus_tag=VA249_RS01545;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_221068578.1;transl_table=11 NZ_AP024165.1 RefSeq gene 315788 317374 . + . ID=gene-VA249_RS01550;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=VA249_RS01550;old_locus_tag=VYA_02950 NZ_AP024165.1 Protein Homology CDS 315788 317374 . + 0 ID=cds-WP_221068579.1;Parent=gene-VA249_RS01550;Dbxref=Genbank:WP_221068579.1;Name=WP_221068579.1;Ontology_term=GO:0015888,GO:0022857;gbkey=CDS;gene=thiP;go_function=transmembrane transporter activity|0022857||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449021.1;locus_tag=VA249_RS01550;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_221068579.1;transl_table=11 NZ_AP024165.1 RefSeq gene 317374 318078 . + . ID=gene-VA249_RS01555;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=VA249_RS01555;old_locus_tag=VYA_02960 NZ_AP024165.1 Protein Homology CDS 317374 318078 . + 0 ID=cds-WP_128812340.1;Parent=gene-VA249_RS01555;Dbxref=Genbank:WP_128812340.1;Name=WP_128812340.1;Ontology_term=GO:0015888,GO:0030974,GO:0005524,GO:0048502,GO:0009898,GO:0055052;gbkey=CDS;gene=thiQ;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126906.1;locus_tag=VA249_RS01555;product=thiamine ABC transporter ATP-binding protein;protein_id=WP_128812340.1;transl_table=11 NZ_AP024165.1 RefSeq gene 318280 318717 . - . ID=gene-VA249_RS01560;Name=VA249_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01560;old_locus_tag=VYA_02970 NZ_AP024165.1 Protein Homology CDS 318280 318717 . - 0 ID=cds-WP_128811760.1;Parent=gene-VA249_RS01560;Dbxref=Genbank:WP_128811760.1;Name=WP_128811760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078755.1;locus_tag=VA249_RS01560;product=universal stress protein;protein_id=WP_128811760.1;transl_table=11 NZ_AP024165.1 RefSeq gene 318762 321341 . - . ID=gene-VA249_RS01565;Name=VA249_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01565;old_locus_tag=VYA_02980 NZ_AP024165.1 Protein Homology CDS 318762 321341 . - 0 ID=cds-WP_221068580.1;Parent=gene-VA249_RS01565;Dbxref=Genbank:WP_221068580.1;Name=WP_221068580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740829.1;locus_tag=VA249_RS01565;product=TRAP transporter permease;protein_id=WP_221068580.1;transl_table=11 NZ_AP024165.1 RefSeq gene 321649 322617 . - . ID=gene-VA249_RS01570;Name=VA249_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01570;old_locus_tag=VYA_02990 NZ_AP024165.1 Protein Homology CDS 321649 322617 . - 0 ID=cds-WP_221068581.1;Parent=gene-VA249_RS01570;Dbxref=Genbank:WP_221068581.1;Name=WP_221068581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434410.1;locus_tag=VA249_RS01570;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_221068581.1;transl_table=11 NZ_AP024165.1 RefSeq gene 323032 323502 . - . ID=gene-VA249_RS01575;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=VA249_RS01575;old_locus_tag=VYA_03000 NZ_AP024165.1 Protein Homology CDS 323032 323502 . - 0 ID=cds-WP_128812339.1;Parent=gene-VA249_RS01575;Dbxref=Genbank:WP_128812339.1;Name=WP_128812339.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078752.1;locus_tag=VA249_RS01575;product=transcriptional regulator ArgR;protein_id=WP_128812339.1;transl_table=11 NZ_AP024165.1 RefSeq gene 323836 324771 . + . ID=gene-VA249_RS01580;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=VA249_RS01580;old_locus_tag=VYA_03010 NZ_AP024165.1 Protein Homology CDS 323836 324771 . + 0 ID=cds-WP_221068582.1;Parent=gene-VA249_RS01580;Dbxref=Genbank:WP_221068582.1;Name=WP_221068582.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126909.1;locus_tag=VA249_RS01580;product=malate dehydrogenase;protein_id=WP_221068582.1;transl_table=11 NZ_AP024165.1 RefSeq gene 324973 325164 . + . ID=gene-VA249_RS01585;Name=VA249_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01585;old_locus_tag=VYA_03020 NZ_AP024165.1 Protein Homology CDS 324973 325164 . + 0 ID=cds-WP_221069778.1;Parent=gene-VA249_RS01585;Dbxref=Genbank:WP_221069778.1;Name=WP_221069778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445455.1;locus_tag=VA249_RS01585;product=hypothetical protein;protein_id=WP_221069778.1;transl_table=11 NZ_AP024165.1 RefSeq gene 325284 326255 . - . ID=gene-VA249_RS01590;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=VA249_RS01590;old_locus_tag=VYA_03030 NZ_AP024165.1 Protein Homology CDS 325284 326255 . - 0 ID=cds-WP_221068583.1;Parent=gene-VA249_RS01590;Dbxref=Genbank:WP_221068583.1;Name=WP_221068583.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817251.1;locus_tag=VA249_RS01590;product=octaprenyl diphosphate synthase;protein_id=WP_221068583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 326524 326835 . + . ID=gene-VA249_RS01595;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=VA249_RS01595;old_locus_tag=VYA_03040 NZ_AP024165.1 Protein Homology CDS 326524 326835 . + 0 ID=cds-WP_000271393.1;Parent=gene-VA249_RS01595;Dbxref=Genbank:WP_000271393.1;Name=WP_000271393.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=VA249_RS01595;product=50S ribosomal protein L21;protein_id=WP_000271393.1;transl_table=11 NZ_AP024165.1 RefSeq gene 326856 327113 . + . ID=gene-VA249_RS01600;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=VA249_RS01600;old_locus_tag=VYA_03050 NZ_AP024165.1 Protein Homology CDS 326856 327113 . + 0 ID=cds-WP_005383095.1;Parent=gene-VA249_RS01600;Dbxref=Genbank:WP_005383095.1;Name=WP_005383095.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=VA249_RS01600;product=50S ribosomal protein L27;protein_id=WP_005383095.1;transl_table=11 NZ_AP024165.1 RefSeq gene 327325 328500 . + . ID=gene-VA249_RS01605;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=VA249_RS01605;old_locus_tag=VYA_03060 NZ_AP024165.1 Protein Homology CDS 327325 328500 . + 0 ID=cds-WP_128811753.1;Parent=gene-VA249_RS01605;Dbxref=Genbank:WP_128811753.1;Name=WP_128811753.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847831.1;locus_tag=VA249_RS01605;product=Obg family GTPase CgtA;protein_id=WP_128811753.1;transl_table=11 NZ_AP024165.1 RefSeq gene 328622 330058 . - . ID=gene-VA249_RS01610;Name=VA249_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01610;old_locus_tag=VYA_03070 NZ_AP024165.1 Protein Homology CDS 328622 330058 . - 0 ID=cds-WP_221067583.1;Parent=gene-VA249_RS01610;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS01610;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 330243 331043 . + . ID=gene-VA249_RS01615;Name=VA249_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01615;old_locus_tag=VYA_03080 NZ_AP024165.1 Protein Homology CDS 330243 331043 . + 0 ID=cds-WP_221068584.1;Parent=gene-VA249_RS01615;Dbxref=Genbank:WP_221068584.1;Name=WP_221068584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335835.1;locus_tag=VA249_RS01615;product=threonine/serine exporter ThrE family protein;protein_id=WP_221068584.1;transl_table=11 NZ_AP024165.1 RefSeq gene 331043 331516 . + . ID=gene-VA249_RS01620;Name=VA249_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01620;old_locus_tag=VYA_03090 NZ_AP024165.1 Protein Homology CDS 331043 331516 . + 0 ID=cds-WP_164837222.1;Parent=gene-VA249_RS01620;Dbxref=Genbank:WP_164837222.1;Name=WP_164837222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698851.1;locus_tag=VA249_RS01620;product=threonine/serine exporter family protein;protein_id=WP_164837222.1;transl_table=11 NZ_AP024165.1 RefSeq gene 331526 332005 . + . ID=gene-VA249_RS01625;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=VA249_RS01625;old_locus_tag=VYA_03100 NZ_AP024165.1 Protein Homology CDS 331526 332005 . + 0 ID=cds-WP_221068585.1;Parent=gene-VA249_RS01625;Dbxref=Genbank:WP_221068585.1;Name=WP_221068585.1;Ontology_term=GO:0046654;gbkey=CDS;gene=folA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445610.1;locus_tag=VA249_RS01625;product=type 3 dihydrofolate reductase;protein_id=WP_221068585.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 332075 332880 . - . ID=gene-VA249_RS01630;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=pseudogene;locus_tag=VA249_RS01630;old_locus_tag=VYA_03110;pseudo=true NZ_AP024165.1 Protein Homology CDS 332075 332880 . - 0 ID=cds-VA249_RS01630;Parent=gene-VA249_RS01630;Note=frameshifted;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430432.1;locus_tag=VA249_RS01630;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 332893 333273 . - . ID=gene-VA249_RS01635;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=VA249_RS01635;old_locus_tag=VYA_03120 NZ_AP024165.1 Protein Homology CDS 332893 333273 . - 0 ID=cds-WP_128811748.1;Parent=gene-VA249_RS01635;Dbxref=Genbank:WP_128811748.1;Name=WP_128811748.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528600.1;locus_tag=VA249_RS01635;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_128811748.1;transl_table=11 NZ_AP024165.1 RefSeq gene 333383 334192 . - . ID=gene-VA249_RS01640;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=VA249_RS01640;old_locus_tag=VYA_03130 NZ_AP024165.1 Protein Homology CDS 333383 334192 . - 0 ID=cds-WP_211915466.1;Parent=gene-VA249_RS01640;Dbxref=Genbank:WP_211915466.1;Name=WP_211915466.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379669.1;locus_tag=VA249_RS01640;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_211915466.1;transl_table=11 NZ_AP024165.1 RefSeq gene 334189 335187 . - . ID=gene-VA249_RS01645;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=VA249_RS01645;old_locus_tag=VYA_03140 NZ_AP024165.1 Protein Homology CDS 334189 335187 . - 0 ID=cds-WP_211916518.1;Parent=gene-VA249_RS01645;Dbxref=Genbank:WP_211916518.1;Name=WP_211916518.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430439.1;locus_tag=VA249_RS01645;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_211916518.1;transl_table=11 NZ_AP024165.1 RefSeq gene 335177 336460 . - . ID=gene-VA249_RS01650;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=VA249_RS01650;old_locus_tag=VYA_03150 NZ_AP024165.1 Protein Homology CDS 335177 336460 . - 0 ID=cds-WP_221068586.1;Parent=gene-VA249_RS01650;Dbxref=Genbank:WP_221068586.1;Name=WP_221068586.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020193958.1;locus_tag=VA249_RS01650;product=peptidylprolyl isomerase SurA;protein_id=WP_221068586.1;transl_table=11 NZ_AP024165.1 RefSeq gene 336522 338891 . - . ID=gene-VA249_RS01655;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=VA249_RS01655;old_locus_tag=VYA_03160 NZ_AP024165.1 Protein Homology CDS 336522 338891 . - 0 ID=cds-WP_221068587.1;Parent=gene-VA249_RS01655;Dbxref=Genbank:WP_221068587.1;Name=WP_221068587.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006742729.1;locus_tag=VA249_RS01655;product=LPS assembly protein LptD;protein_id=WP_221068587.1;transl_table=11 NZ_AP024165.1 RefSeq gene 339162 340013 . + . ID=gene-VA249_RS01660;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=VA249_RS01660;old_locus_tag=VYA_03170 NZ_AP024165.1 Protein Homology CDS 339162 340013 . + 0 ID=cds-WP_128811744.1;Parent=gene-VA249_RS01660;Dbxref=Genbank:WP_128811744.1;Name=WP_128811744.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017073057.1;locus_tag=VA249_RS01660;product=co-chaperone DjlA;protein_id=WP_128811744.1;transl_table=11 NZ_AP024165.1 RefSeq gene 340189 340971 . - . ID=gene-VA249_RS01665;Name=VA249_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01665;old_locus_tag=VYA_03180 NZ_AP024165.1 Protein Homology CDS 340189 340971 . - 0 ID=cds-WP_221068588.1;Parent=gene-VA249_RS01665;Dbxref=Genbank:WP_221068588.1;Name=WP_221068588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013572465.1;locus_tag=VA249_RS01665;product=DUF547 domain-containing protein;protein_id=WP_221068588.1;transl_table=11 NZ_AP024165.1 RefSeq gene 341104 341706 . - . ID=gene-VA249_RS01670;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=VA249_RS01670;old_locus_tag=VYA_03190 NZ_AP024165.1 Protein Homology CDS 341104 341706 . - 0 ID=cds-WP_221068589.1;Parent=gene-VA249_RS01670;Dbxref=Genbank:WP_221068589.1;Name=WP_221068589.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126923.1;locus_tag=VA249_RS01670;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_221068589.1;transl_table=11 NZ_AP024165.1 RefSeq gene 341719 343137 . - . ID=gene-VA249_RS01675;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=VA249_RS01675;old_locus_tag=VYA_03200 NZ_AP024165.1 Protein Homology CDS 341719 343137 . - 0 ID=cds-WP_221068590.1;Parent=gene-VA249_RS01675;Dbxref=Genbank:WP_221068590.1;Name=WP_221068590.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450463.1;locus_tag=VA249_RS01675;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_221068590.1;transl_table=11 NZ_AP024165.1 RefSeq gene 343161 344252 . - . ID=gene-VA249_RS01680;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=VA249_RS01680;old_locus_tag=VYA_03210 NZ_AP024165.1 Protein Homology CDS 343161 344252 . - 0 ID=cds-WP_221068591.1;Parent=gene-VA249_RS01680;Dbxref=Genbank:WP_221068591.1;Name=WP_221068591.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126925.1;locus_tag=VA249_RS01680;product=3-isopropylmalate dehydrogenase;protein_id=WP_221068591.1;transl_table=11 NZ_AP024165.1 RefSeq gene 344340 345887 . - . ID=gene-VA249_RS01685;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=VA249_RS01685;old_locus_tag=VYA_03220 NZ_AP024165.1 Protein Homology CDS 344340 345887 . - 0 ID=cds-WP_221068592.1;Parent=gene-VA249_RS01685;Dbxref=Genbank:WP_221068592.1;Name=WP_221068592.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528614.1;locus_tag=VA249_RS01685;product=2-isopropylmalate synthase;protein_id=WP_221068592.1;transl_table=11 NZ_AP024165.1 RefSeq gene 346397 347188 . + . ID=gene-VA249_RS01690;Name=VA249_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01690;old_locus_tag=VYA_03230 NZ_AP024165.1 Protein Homology CDS 346397 347188 . + 0 ID=cds-WP_221068593.1;Parent=gene-VA249_RS01690;Dbxref=Genbank:WP_221068593.1;Name=WP_221068593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020193963.1;locus_tag=VA249_RS01690;product=SH3 domain-containing protein;protein_id=WP_221068593.1;transl_table=11 NZ_AP024165.1 RefSeq gene 347327 347881 . + . ID=gene-VA249_RS01695;Name=VA249_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01695;old_locus_tag=VYA_03240 NZ_AP024165.1 Protein Homology CDS 347327 347881 . + 0 ID=cds-WP_128811737.1;Parent=gene-VA249_RS01695;Dbxref=Genbank:WP_128811737.1;Name=WP_128811737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230728.1;locus_tag=VA249_RS01695;product=phosphatase PAP2 family protein;protein_id=WP_128811737.1;transl_table=11 NZ_AP024165.1 RefSeq gene 347878 348924 . + . ID=gene-VA249_RS01700;Name=VA249_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01700;old_locus_tag=VYA_03250 NZ_AP024165.1 Protein Homology CDS 347878 348924 . + 0 ID=cds-WP_221068594.1;Parent=gene-VA249_RS01700;Dbxref=Genbank:WP_221068594.1;Name=WP_221068594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698845.1;locus_tag=VA249_RS01700;product=glycosyltransferase;protein_id=WP_221068594.1;transl_table=11 NZ_AP024165.1 RefSeq gene 349409 350368 . + . ID=gene-VA249_RS01705;Name=calR;gbkey=Gene;gene=calR;gene_biotype=protein_coding;locus_tag=VA249_RS01705;old_locus_tag=VYA_03260 NZ_AP024165.1 Protein Homology CDS 349409 350368 . + 0 ID=cds-WP_221068595.1;Parent=gene-VA249_RS01705;Dbxref=Genbank:WP_221068595.1;Name=WP_221068595.1;gbkey=CDS;gene=calR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005459522.1;locus_tag=VA249_RS01705;product=LysR family transcriptional regulator CalR;protein_id=WP_221068595.1;transl_table=11 NZ_AP024165.1 RefSeq gene 350667 352475 . + . ID=gene-VA249_RS01710;Name=VA249_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01710;old_locus_tag=VYA_03270 NZ_AP024165.1 Protein Homology CDS 350667 352475 . + 0 ID=cds-WP_221068596.1;Parent=gene-VA249_RS01710;Dbxref=Genbank:WP_221068596.1;Name=WP_221068596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633471.1;locus_tag=VA249_RS01710;product=long-chain fatty acid--CoA ligase;protein_id=WP_221068596.1;transl_table=11 NZ_AP024165.1 RefSeq gene 352921 354645 . + . ID=gene-VA249_RS01715;Name=VA249_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01715;old_locus_tag=VYA_03280 NZ_AP024165.1 Protein Homology CDS 352921 354645 . + 0 ID=cds-WP_221068597.1;Parent=gene-VA249_RS01715;Dbxref=Genbank:WP_221068597.1;Name=WP_221068597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020193967.1;locus_tag=VA249_RS01715;product=acetolactate synthase 3 large subunit;protein_id=WP_221068597.1;transl_table=11 NZ_AP024165.1 RefSeq gene 354647 355141 . + . ID=gene-VA249_RS01720;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=VA249_RS01720;old_locus_tag=VYA_03290 NZ_AP024165.1 Protein Homology CDS 354647 355141 . + 0 ID=cds-WP_128811733.1;Parent=gene-VA249_RS01720;Dbxref=Genbank:WP_128811733.1;Name=WP_128811733.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379697.1;locus_tag=VA249_RS01720;product=acetolactate synthase small subunit;protein_id=WP_128811733.1;transl_table=11 NZ_AP024165.1 RefSeq gene 355380 357266 . + . ID=gene-VA249_RS01725;Name=VA249_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01725;old_locus_tag=VYA_03300 NZ_AP024165.1 Protein Homology CDS 355380 357266 . + 0 ID=cds-WP_221068598.1;Parent=gene-VA249_RS01725;Dbxref=Genbank:WP_221068598.1;Name=WP_221068598.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528628.1;locus_tag=VA249_RS01725;product=sensor domain-containing diguanylate cyclase;protein_id=WP_221068598.1;transl_table=11 NZ_AP024165.1 RefSeq gene 357347 358018 . - . ID=gene-VA249_RS01730;Name=VA249_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01730;old_locus_tag=VYA_03310 NZ_AP024165.1 Protein Homology CDS 357347 358018 . - 0 ID=cds-WP_128811732.1;Parent=gene-VA249_RS01730;Dbxref=Genbank:WP_128811732.1;Name=WP_128811732.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017073072.1;locus_tag=VA249_RS01730;product=GntR family transcriptional regulator;protein_id=WP_128811732.1;transl_table=11 NZ_AP024165.1 RefSeq gene 358170 359582 . - . ID=gene-VA249_RS01735;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=VA249_RS01735;old_locus_tag=VYA_03320 NZ_AP024165.1 Protein Homology CDS 358170 359582 . - 0 ID=cds-WP_221068599.1;Parent=gene-VA249_RS01735;Dbxref=Genbank:WP_221068599.1;Name=WP_221068599.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008989806.1;locus_tag=VA249_RS01735;product=pyruvate kinase PykF;protein_id=WP_221068599.1;transl_table=11 NZ_AP024165.1 RefSeq gene 360015 360776 . + . ID=gene-VA249_RS01740;Name=VA249_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01740;old_locus_tag=VYA_03330 NZ_AP024165.1 Protein Homology CDS 360015 360776 . + 0 ID=cds-WP_221068600.1;Parent=gene-VA249_RS01740;Dbxref=Genbank:WP_221068600.1;Name=WP_221068600.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230735.1;locus_tag=VA249_RS01740;product=DeoR family transcriptional regulator;protein_id=WP_221068600.1;transl_table=11 NZ_AP024165.1 RefSeq gene 360959 362791 . + . ID=gene-VA249_RS01745;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=VA249_RS01745;old_locus_tag=VYA_03340 NZ_AP024165.1 Protein Homology CDS 360959 362791 . + 0 ID=cds-WP_221068601.1;Parent=gene-VA249_RS01745;Dbxref=Genbank:WP_221068601.1;Name=WP_221068601.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830207.1;locus_tag=VA249_RS01745;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_221068601.1;transl_table=11 NZ_AP024165.1 RefSeq gene 363069 363353 . + . ID=gene-VA249_RS01750;Name=VA249_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01750;old_locus_tag=VYA_03350 NZ_AP024165.1 Protein Homology CDS 363069 363353 . + 0 ID=cds-WP_221068602.1;Parent=gene-VA249_RS01750;Dbxref=Genbank:WP_221068602.1;Name=WP_221068602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445681.1;locus_tag=VA249_RS01750;product=D-fructose-6-phosphate amidotransferase;protein_id=WP_221068602.1;transl_table=11 NZ_AP024165.1 RefSeq gene 364102 364647 . - . ID=gene-VA249_RS01755;Name=VA249_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01755;old_locus_tag=VYA_03360 NZ_AP024165.1 Protein Homology CDS 364102 364647 . - 0 ID=cds-WP_221068603.1;Parent=gene-VA249_RS01755;Dbxref=Genbank:WP_221068603.1;Name=WP_221068603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=VA249_RS01755;product=AraC family transcriptional regulator;protein_id=WP_221068603.1;transl_table=11 NZ_AP024165.1 RefSeq gene 364823 365584 . - . ID=gene-VA249_RS01760;Name=VA249_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01760;old_locus_tag=VYA_03370 NZ_AP024165.1 Protein Homology CDS 364823 365584 . - 0 ID=cds-WP_221068604.1;Parent=gene-VA249_RS01760;Dbxref=Genbank:WP_221068604.1;Name=WP_221068604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=VA249_RS01760;product=EAL domain-containing protein;protein_id=WP_221068604.1;transl_table=11 NZ_AP024165.1 RefSeq gene 367105 367740 . + . ID=gene-VA249_RS01765;Name=VA249_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01765;old_locus_tag=VYA_03380 NZ_AP024165.1 Protein Homology CDS 367105 367740 . + 0 ID=cds-WP_221068605.1;Parent=gene-VA249_RS01765;Dbxref=Genbank:WP_221068605.1;Name=WP_221068605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026010.2;locus_tag=VA249_RS01765;product=hypothetical protein;protein_id=WP_221068605.1;transl_table=11 NZ_AP024165.1 RefSeq gene 367680 368513 . + . ID=gene-VA249_RS01770;Name=VA249_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01770;old_locus_tag=VYA_03390 NZ_AP024165.1 Protein Homology CDS 367680 368513 . + 0 ID=cds-WP_221068606.1;Parent=gene-VA249_RS01770;Dbxref=Genbank:WP_221068606.1;Name=WP_221068606.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=VA249_RS01770;product=tyrosine-type recombinase/integrase;protein_id=WP_221068606.1;transl_table=11 NZ_AP024165.1 RefSeq gene 369645 370136 . - . ID=gene-VA249_RS01775;Name=VA249_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01775;old_locus_tag=VYA_03410 NZ_AP024165.1 GeneMarkS-2+ CDS 369645 370136 . - 0 ID=cds-WP_221068607.1;Parent=gene-VA249_RS01775;Dbxref=Genbank:WP_221068607.1;Name=WP_221068607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS01775;product=hypothetical protein;protein_id=WP_221068607.1;transl_table=11 NZ_AP024165.1 RefSeq gene 370182 370538 . - . ID=gene-VA249_RS01780;Name=VA249_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01780;old_locus_tag=VYA_03420 NZ_AP024165.1 GeneMarkS-2+ CDS 370182 370538 . - 0 ID=cds-WP_221068608.1;Parent=gene-VA249_RS01780;Dbxref=Genbank:WP_221068608.1;Name=WP_221068608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS01780;product=hypothetical protein;protein_id=WP_221068608.1;transl_table=11 NZ_AP024165.1 RefSeq gene 371368 372777 . + . ID=gene-VA249_RS01785;Name=VA249_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01785;old_locus_tag=VYA_03430 NZ_AP024165.1 Protein Homology CDS 371368 372777 . + 0 ID=cds-WP_221068609.1;Parent=gene-VA249_RS01785;Dbxref=Genbank:WP_221068609.1;Name=WP_221068609.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=VA249_RS01785;product=tyrosine-type recombinase/integrase;protein_id=WP_221068609.1;transl_table=11 NZ_AP024165.1 RefSeq gene 372839 372991 . - . ID=gene-VA249_RS01790;Name=VA249_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01790;old_locus_tag=VYA_03440 NZ_AP024165.1 GeneMarkS-2+ CDS 372839 372991 . - 0 ID=cds-WP_221068610.1;Parent=gene-VA249_RS01790;Dbxref=Genbank:WP_221068610.1;Name=WP_221068610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS01790;product=hypothetical protein;protein_id=WP_221068610.1;transl_table=11 NZ_AP024165.1 RefSeq gene 374411 375424 . + . ID=gene-VA249_RS01795;Name=VA249_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01795;old_locus_tag=VYA_03450 NZ_AP024165.1 Protein Homology CDS 374411 375424 . + 0 ID=cds-WP_221068611.1;Parent=gene-VA249_RS01795;Dbxref=Genbank:WP_221068611.1;Name=WP_221068611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231390.1;locus_tag=VA249_RS01795;product=integrase domain-containing protein;protein_id=WP_221068611.1;transl_table=11 NZ_AP024165.1 RefSeq gene 375434 375733 . + . ID=gene-VA249_RS01800;Name=VA249_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01800;old_locus_tag=VYA_03460 NZ_AP024165.1 Protein Homology CDS 375434 375733 . + 0 ID=cds-WP_221068612.1;Parent=gene-VA249_RS01800;Dbxref=Genbank:WP_221068612.1;Name=WP_221068612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017243613.1;locus_tag=VA249_RS01800;product=hypothetical protein;protein_id=WP_221068612.1;transl_table=11 NZ_AP024165.1 RefSeq gene 375905 376105 . + . ID=gene-VA249_RS01805;Name=VA249_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01805;old_locus_tag=VYA_03470 NZ_AP024165.1 Protein Homology CDS 375905 376105 . + 0 ID=cds-WP_221068613.1;Parent=gene-VA249_RS01805;Dbxref=Genbank:WP_221068613.1;Name=WP_221068613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.2;locus_tag=VA249_RS01805;product=helix-turn-helix domain-containing protein;protein_id=WP_221068613.1;transl_table=11 NZ_AP024165.1 RefSeq gene 376309 376384 . - . ID=gene-VA249_RS01810;Name=VA249_RS01810;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS01810;old_locus_tag=VYA_t00110 NZ_AP024165.1 tRNAscan-SE tRNA 376309 376384 . - . ID=rna-VA249_RS01810;Parent=gene-VA249_RS01810;anticodon=(pos:complement(376349..376351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS01810;product=tRNA-Ile NZ_AP024165.1 tRNAscan-SE exon 376309 376384 . - . ID=exon-VA249_RS01810-1;Parent=rna-VA249_RS01810;anticodon=(pos:complement(376349..376351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS01810;product=tRNA-Ile NZ_AP024165.1 RefSeq gene 376529 378397 . - . ID=gene-VA249_RS01815;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=VA249_RS01815;old_locus_tag=VYA_03480 NZ_AP024165.1 Protein Homology CDS 376529 378397 . - 0 ID=cds-WP_211915445.1;Parent=gene-VA249_RS01815;Dbxref=Genbank:WP_211915445.1;Name=WP_211915445.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017062924.1;locus_tag=VA249_RS01815;product=RNA polymerase sigma factor RpoD;protein_id=WP_211915445.1;transl_table=11 NZ_AP024165.1 RefSeq gene 378497 380257 . - . ID=gene-VA249_RS01820;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=VA249_RS01820;old_locus_tag=VYA_03490 NZ_AP024165.1 Protein Homology CDS 378497 380257 . - 0 ID=cds-WP_221068614.1;Parent=gene-VA249_RS01820;Dbxref=Genbank:WP_221068614.1;Name=WP_221068614.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434609.1;locus_tag=VA249_RS01820;product=DNA primase;protein_id=WP_221068614.1;transl_table=11 NZ_AP024165.1 RefSeq gene 380405 380848 . - . ID=gene-VA249_RS01825;Name=VA249_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01825;old_locus_tag=VYA_03500 NZ_AP024165.1 Protein Homology CDS 380405 380848 . - 0 ID=cds-WP_211915443.1;Parent=gene-VA249_RS01825;Dbxref=Genbank:WP_211915443.1;Name=WP_211915443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005389489.1;locus_tag=VA249_RS01825;product=GatB/YqeY domain-containing protein;protein_id=WP_211915443.1;transl_table=11 NZ_AP024165.1 RefSeq gene 380877 381092 . - . ID=gene-VA249_RS01830;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=VA249_RS01830;old_locus_tag=VYA_03510 NZ_AP024165.1 Protein Homology CDS 380877 381092 . - 0 ID=cds-WP_001145625.1;Parent=gene-VA249_RS01830;Dbxref=Genbank:WP_001145625.1;Name=WP_001145625.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=VA249_RS01830;product=30S ribosomal protein S21;protein_id=WP_001145625.1;transl_table=11 NZ_AP024165.1 RefSeq gene 381323 382339 . + . ID=gene-VA249_RS01835;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=VA249_RS01835;old_locus_tag=VYA_03520 NZ_AP024165.1 Protein Homology CDS 381323 382339 . + 0 ID=cds-WP_221069780.1;Parent=gene-VA249_RS01835;Dbxref=Genbank:WP_221069780.1;Name=WP_221069780.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528787.1;locus_tag=VA249_RS01835;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_221069780.1;transl_table=11 NZ_AP024165.1 RefSeq gene 382459 383277 . + . ID=gene-VA249_RS01840;Name=VA249_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01840;old_locus_tag=VYA_03530 NZ_AP024165.1 Protein Homology CDS 382459 383277 . + 0 ID=cds-WP_221068615.1;Parent=gene-VA249_RS01840;Dbxref=Genbank:WP_221068615.1;Name=WP_221068615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020193983.1;locus_tag=VA249_RS01840;product=alpha/beta hydrolase;protein_id=WP_221068615.1;transl_table=11 NZ_AP024165.1 RefSeq gene 383310 383921 . - . ID=gene-VA249_RS01845;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=VA249_RS01845;old_locus_tag=VYA_03540 NZ_AP024165.1 Protein Homology CDS 383310 383921 . - 0 ID=cds-WP_128811710.1;Parent=gene-VA249_RS01845;Dbxref=Genbank:WP_128811710.1;Name=WP_128811710.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005497033.1;locus_tag=VA249_RS01845;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_128811710.1;transl_table=11 NZ_AP024165.1 RefSeq gene 384188 384547 . + . ID=gene-VA249_RS01850;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=VA249_RS01850;old_locus_tag=VYA_03550 NZ_AP024165.1 Protein Homology CDS 384188 384547 . + 0 ID=cds-WP_221068616.1;Parent=gene-VA249_RS01850;Dbxref=Genbank:WP_221068616.1;Name=WP_221068616.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008222534.1;locus_tag=VA249_RS01850;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_221068616.1;transl_table=11 NZ_AP024165.1 RefSeq gene 384544 385026 . + . ID=gene-VA249_RS01855;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=VA249_RS01855;old_locus_tag=VYA_03560 NZ_AP024165.1 Protein Homology CDS 384544 385026 . + 0 ID=cds-WP_221068617.1;Parent=gene-VA249_RS01855;Dbxref=Genbank:WP_221068617.1;Name=WP_221068617.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005387457.1;locus_tag=VA249_RS01855;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_221068617.1;transl_table=11 NZ_AP024165.1 RefSeq gene 385042 385845 . + . ID=gene-VA249_RS01860;Name=VA249_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01860;old_locus_tag=VYA_03570 NZ_AP024165.1 Protein Homology CDS 385042 385845 . + 0 ID=cds-WP_211915440.1;Parent=gene-VA249_RS01860;Dbxref=Genbank:WP_211915440.1;Name=WP_211915440.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004749097.1;locus_tag=VA249_RS01860;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_211915440.1;transl_table=11 NZ_AP024165.1 RefSeq gene 385931 387172 . - . ID=gene-VA249_RS01865;Name=VA249_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01865;old_locus_tag=VYA_03580 NZ_AP024165.1 Protein Homology CDS 385931 387172 . - 0 ID=cds-WP_221068618.1;Parent=gene-VA249_RS01865;Dbxref=Genbank:WP_221068618.1;Name=WP_221068618.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA adenylyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126958.1;locus_tag=VA249_RS01865;product=multifunctional CCA addition/repair protein;protein_id=WP_221068618.1;transl_table=11 NZ_AP024165.1 RefSeq gene 387309 388973 . + . ID=gene-VA249_RS01870;Name=VA249_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01870;old_locus_tag=VYA_03590 NZ_AP024165.1 Protein Homology CDS 387309 388973 . + 0 ID=cds-WP_221068619.1;Parent=gene-VA249_RS01870;Dbxref=Genbank:WP_221068619.1;Name=WP_221068619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843353.1;locus_tag=VA249_RS01870;product=AAA family ATPase;protein_id=WP_221068619.1;transl_table=11 NZ_AP024165.1 RefSeq gene 388973 389719 . + . ID=gene-VA249_RS01875;Name=VA249_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01875;old_locus_tag=VYA_03600 NZ_AP024165.1 Protein Homology CDS 388973 389719 . + 0 ID=cds-WP_221068620.1;Parent=gene-VA249_RS01875;Dbxref=Genbank:WP_221068620.1;Name=WP_221068620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450409.1;locus_tag=VA249_RS01875;product=general secretion pathway protein GspB;protein_id=WP_221068620.1;transl_table=11 NZ_AP024165.1 RefSeq gene 389818 390429 . - . ID=gene-VA249_RS01880;Name=VA249_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01880;old_locus_tag=VYA_03610 NZ_AP024165.1 Protein Homology CDS 389818 390429 . - 0 ID=cds-WP_128811706.1;Parent=gene-VA249_RS01880;Dbxref=Genbank:WP_128811706.1;Name=WP_128811706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528771.1;locus_tag=VA249_RS01880;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_128811706.1;transl_table=11 NZ_AP024165.1 RefSeq gene 390625 391884 . - . ID=gene-VA249_RS01885;Name=VA249_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01885;old_locus_tag=VYA_03620 NZ_AP024165.1 Protein Homology CDS 390625 391884 . - 0 ID=cds-WP_128811705.1;Parent=gene-VA249_RS01885;Dbxref=Genbank:WP_128811705.1;Name=WP_128811705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004415583.1;locus_tag=VA249_RS01885;product=inorganic phosphate transporter;protein_id=WP_128811705.1;transl_table=11 NZ_AP024165.1 RefSeq gene 392015 392695 . - . ID=gene-VA249_RS01890;Name=VA249_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01890;old_locus_tag=VYA_03630 NZ_AP024165.1 Protein Homology CDS 392015 392695 . - 0 ID=cds-WP_164837221.1;Parent=gene-VA249_RS01890;Dbxref=Genbank:WP_164837221.1;Name=WP_164837221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008222549.1;locus_tag=VA249_RS01890;product=TIGR00153 family protein;protein_id=WP_164837221.1;transl_table=11 NZ_AP024165.1 RefSeq gene 392902 394434 . + . ID=gene-VA249_RS01895;Name=VA249_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01895;old_locus_tag=VYA_03640 NZ_AP024165.1 Protein Homology CDS 392902 394434 . + 0 ID=cds-WP_128811703.1;Parent=gene-VA249_RS01895;Dbxref=Genbank:WP_128811703.1;Name=WP_128811703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017084750.1;locus_tag=VA249_RS01895;product=inorganic triphosphatase;protein_id=WP_128811703.1;transl_table=11 NZ_AP024165.1 RefSeq gene 394469 395242 . - . ID=gene-VA249_RS01900;Name=VA249_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01900;old_locus_tag=VYA_03650 NZ_AP024165.1 Protein Homology CDS 394469 395242 . - 0 ID=cds-WP_221068621.1;Parent=gene-VA249_RS01900;Dbxref=Genbank:WP_221068621.1;Name=WP_221068621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843360.1;locus_tag=VA249_RS01900;product=ion transporter;protein_id=WP_221068621.1;transl_table=11 NZ_AP024165.1 RefSeq gene 395317 396573 . + . ID=gene-VA249_RS01905;Name=VA249_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01905;old_locus_tag=VYA_03660 NZ_AP024165.1 Protein Homology CDS 395317 396573 . + 0 ID=cds-WP_221068622.1;Parent=gene-VA249_RS01905;Dbxref=Genbank:WP_221068622.1;Name=WP_221068622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019826853.1;locus_tag=VA249_RS01905;product=methyl-accepting chemotaxis protein;protein_id=WP_221068622.1;transl_table=11 NZ_AP024165.1 RefSeq gene 396676 399519 . + . ID=gene-VA249_RS01910;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=VA249_RS01910;old_locus_tag=VYA_03670 NZ_AP024165.1 Protein Homology CDS 396676 399519 . + 0 ID=cds-WP_221068623.1;Parent=gene-VA249_RS01910;Dbxref=Genbank:WP_221068623.1;Name=WP_221068623.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455447.1;locus_tag=VA249_RS01910;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_221068623.1;transl_table=11 NZ_AP024165.1 RefSeq gene 399586 401016 . + . ID=gene-VA249_RS01915;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=VA249_RS01915;old_locus_tag=VYA_03680 NZ_AP024165.1 Protein Homology CDS 399586 401016 . + 0 ID=cds-WP_221068624.1;Parent=gene-VA249_RS01915;Dbxref=Genbank:WP_221068624.1;Name=WP_221068624.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016789747.1;locus_tag=VA249_RS01915;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_221068624.1;transl_table=11 NZ_AP024165.1 RefSeq gene 401196 402518 . - . ID=gene-VA249_RS01920;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=VA249_RS01920;old_locus_tag=VYA_03690 NZ_AP024165.1 Protein Homology CDS 401196 402518 . - 0 ID=cds-WP_221068625.1;Parent=gene-VA249_RS01920;Dbxref=Genbank:WP_221068625.1;Name=WP_221068625.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230771.1;locus_tag=VA249_RS01920;product=outer membrane channel protein TolC;protein_id=WP_221068625.1;transl_table=11 NZ_AP024165.1 RefSeq gene 402749 403399 . + . ID=gene-VA249_RS01925;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=VA249_RS01925;old_locus_tag=VYA_03700 NZ_AP024165.1 Protein Homology CDS 402749 403399 . + 0 ID=cds-WP_221068626.1;Parent=gene-VA249_RS01925;Dbxref=Genbank:WP_221068626.1;Name=WP_221068626.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379881.1;locus_tag=VA249_RS01925;product=ADP-ribose diphosphatase;protein_id=WP_221068626.1;transl_table=11 NZ_AP024165.1 RefSeq gene 403399 403842 . + . ID=gene-VA249_RS01930;Name=VA249_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01930;old_locus_tag=VYA_03710 NZ_AP024165.1 Protein Homology CDS 403399 403842 . + 0 ID=cds-WP_128811697.1;Parent=gene-VA249_RS01930;Dbxref=Genbank:WP_128811697.1;Name=WP_128811697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005395930.1;locus_tag=VA249_RS01930;product=DUF1249 family protein;protein_id=WP_128811697.1;transl_table=11 NZ_AP024165.1 RefSeq gene 403906 404712 . + . ID=gene-VA249_RS01935;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=VA249_RS01935;old_locus_tag=VYA_03720 NZ_AP024165.1 Protein Homology CDS 403906 404712 . + 0 ID=cds-WP_221068627.1;Parent=gene-VA249_RS01935;Dbxref=Genbank:WP_221068627.1;Name=WP_221068627.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528755.1;locus_tag=VA249_RS01935;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_221068627.1;transl_table=11 NZ_AP024165.1 RefSeq gene 404767 405351 . + . ID=gene-VA249_RS01940;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=VA249_RS01940;old_locus_tag=VYA_03730 NZ_AP024165.1 Protein Homology CDS 404767 405351 . + 0 ID=cds-WP_128811695.1;Parent=gene-VA249_RS01940;Dbxref=Genbank:WP_128811695.1;Name=WP_128811695.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431720.1;locus_tag=VA249_RS01940;product=esterase YqiA;protein_id=WP_128811695.1;transl_table=11 NZ_AP024165.1 RefSeq gene 405601 407481 . + . ID=gene-VA249_RS01945;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=VA249_RS01945;old_locus_tag=VYA_03740 NZ_AP024165.1 Protein Homology CDS 405601 407481 . + 0 ID=cds-WP_128811694.1;Parent=gene-VA249_RS01945;Dbxref=Genbank:WP_128811694.1;Name=WP_128811694.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445819.1;locus_tag=VA249_RS01945;product=DNA topoisomerase IV subunit B;protein_id=WP_128811694.1;transl_table=11 NZ_AP024165.1 RefSeq gene 407485 409773 . + . ID=gene-VA249_RS01950;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=VA249_RS01950;old_locus_tag=VYA_03750 NZ_AP024165.1 Protein Homology CDS 407485 409773 . + 0 ID=cds-WP_221068628.1;Parent=gene-VA249_RS01950;Dbxref=Genbank:WP_221068628.1;Name=WP_221068628.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528747.1;locus_tag=VA249_RS01950;product=DNA topoisomerase IV subunit A;protein_id=WP_221068628.1;transl_table=11 NZ_AP024165.1 RefSeq gene 409823 410890 . - . ID=gene-VA249_RS01955;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=VA249_RS01955;old_locus_tag=VYA_03760 NZ_AP024165.1 Protein Homology CDS 409823 410890 . - 0 ID=cds-WP_128811692.1;Parent=gene-VA249_RS01955;Dbxref=Genbank:WP_128811692.1;Name=WP_128811692.1;Ontology_term=GO:0008236,GO:0045152,GO:0030288;gbkey=CDS;gene=degS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type peptidase activity|0008236||IEA,antisigma factor binding|0045152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528745.1;locus_tag=VA249_RS01955;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_128811692.1;transl_table=11 NZ_AP024165.1 RefSeq gene 411009 412376 . - . ID=gene-VA249_RS01960;Name=VA249_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01960;old_locus_tag=VYA_03770 NZ_AP024165.1 Protein Homology CDS 411009 412376 . - 0 ID=cds-WP_221068629.1;Parent=gene-VA249_RS01960;Dbxref=Genbank:WP_221068629.1;Name=WP_221068629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749332.1;locus_tag=VA249_RS01960;product=DegQ family serine endoprotease;protein_id=WP_221068629.1;transl_table=11 NZ_AP024165.1 RefSeq gene 412573 413016 . - . ID=gene-VA249_RS01965;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=VA249_RS01965;old_locus_tag=VYA_03780 NZ_AP024165.1 Protein Homology CDS 412573 413016 . - 0 ID=cds-WP_128811690.1;Parent=gene-VA249_RS01965;Dbxref=Genbank:WP_128811690.1;Name=WP_128811690.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434684.1;locus_tag=VA249_RS01965;product=Z-ring associated protein ZapG;protein_id=WP_128811690.1;transl_table=11 NZ_AP024165.1 RefSeq gene 413215 414318 . + . ID=gene-VA249_RS01970;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=VA249_RS01970;old_locus_tag=VYA_03790 NZ_AP024165.1 Protein Homology CDS 413215 414318 . + 0 ID=cds-WP_211915425.1;Parent=gene-VA249_RS01970;Dbxref=Genbank:WP_211915425.1;Name=WP_211915425.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012603203.1;locus_tag=VA249_RS01970;product=cell division protein ZapE;protein_id=WP_211915425.1;transl_table=11 NZ_AP024165.1 RefSeq gene 414571 414999 . + . ID=gene-VA249_RS01975;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=VA249_RS01975;old_locus_tag=VYA_03800 NZ_AP024165.1 Protein Homology CDS 414571 414999 . + 0 ID=cds-WP_005372872.1;Parent=gene-VA249_RS01975;Dbxref=Genbank:WP_005372872.1;Name=WP_005372872.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=VA249_RS01975;product=50S ribosomal protein L13;protein_id=WP_005372872.1;transl_table=11 NZ_AP024165.1 RefSeq gene 415015 415407 . + . ID=gene-VA249_RS01980;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=VA249_RS01980;old_locus_tag=VYA_03810 NZ_AP024165.1 Protein Homology CDS 415015 415407 . + 0 ID=cds-WP_005436094.1;Parent=gene-VA249_RS01980;Dbxref=Genbank:WP_005436094.1;Name=WP_005436094.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=VA249_RS01980;product=30S ribosomal protein S9;protein_id=WP_005436094.1;transl_table=11 NZ_AP024165.1 RefSeq gene 415954 416544 . + . ID=gene-VA249_RS01985;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=VA249_RS01985;old_locus_tag=VYA_03820 NZ_AP024165.1 Protein Homology CDS 415954 416544 . + 0 ID=cds-WP_211915424.1;Parent=gene-VA249_RS01985;Dbxref=Genbank:WP_211915424.1;Name=WP_211915424.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063597.1;locus_tag=VA249_RS01985;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_211915424.1;transl_table=11 NZ_AP024165.1 RefSeq gene 416544 417809 . + . ID=gene-VA249_RS01990;Name=VA249_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01990;old_locus_tag=VYA_03830 NZ_AP024165.1 Protein Homology CDS 416544 417809 . + 0 ID=cds-WP_128811686.1;Parent=gene-VA249_RS01990;Dbxref=Genbank:WP_128811686.1;Name=WP_128811686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148351.1;locus_tag=VA249_RS01990;product=cytochrome bc complex cytochrome b subunit;protein_id=WP_128811686.1;transl_table=11 NZ_AP024165.1 RefSeq gene 417806 418543 . + . ID=gene-VA249_RS01995;Name=VA249_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS01995;old_locus_tag=VYA_03840 NZ_AP024165.1 Protein Homology CDS 417806 418543 . + 0 ID=cds-WP_211915422.1;Parent=gene-VA249_RS01995;Dbxref=Genbank:WP_211915422.1;Name=WP_211915422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190074.1;locus_tag=VA249_RS01995;product=cytochrome c1;protein_id=WP_211915422.1;transl_table=11 NZ_AP024165.1 RefSeq gene 418640 419275 . + . ID=gene-VA249_RS02000;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=VA249_RS02000;old_locus_tag=VYA_03850 NZ_AP024165.1 Protein Homology CDS 418640 419275 . + 0 ID=cds-WP_005436105.1;Parent=gene-VA249_RS02000;Dbxref=Genbank:WP_005436105.1;Name=WP_005436105.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006877359.1;locus_tag=VA249_RS02000;product=stringent starvation protein A;protein_id=WP_005436105.1;transl_table=11 NZ_AP024165.1 RefSeq gene 419295 419774 . + . ID=gene-VA249_RS02005;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=VA249_RS02005;old_locus_tag=VYA_03860 NZ_AP024165.1 Protein Homology CDS 419295 419774 . + 0 ID=cds-WP_211915421.1;Parent=gene-VA249_RS02005;Dbxref=Genbank:WP_211915421.1;Name=WP_211915421.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447768.1;locus_tag=VA249_RS02005;product=ClpXP protease specificity-enhancing factor;protein_id=WP_211915421.1;transl_table=11 NZ_AP024165.1 RefSeq gene 419837 420439 . - . ID=gene-VA249_RS02010;Name=VA249_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02010;old_locus_tag=VYA_03870 NZ_AP024165.1 Protein Homology CDS 419837 420439 . - 0 ID=cds-WP_221068630.1;Parent=gene-VA249_RS02010;Dbxref=Genbank:WP_221068630.1;Name=WP_221068630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449189.1;locus_tag=VA249_RS02010;product=BON domain-containing protein;protein_id=WP_221068630.1;transl_table=11 NZ_AP024165.1 RefSeq gene 420462 421052 . - . ID=gene-VA249_RS02015;Name=VA249_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02015;old_locus_tag=VYA_03880 NZ_AP024165.1 Protein Homology CDS 420462 421052 . - 0 ID=cds-WP_128811682.1;Parent=gene-VA249_RS02015;Dbxref=Genbank:WP_128811682.1;Name=WP_128811682.1;Ontology_term=GO:1901135,GO:0008968,GO:0097367;gbkey=CDS;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887295.1;locus_tag=VA249_RS02015;product=phosphoheptose isomerase;protein_id=WP_128811682.1;transl_table=11 NZ_AP024165.1 RefSeq gene 421056 421421 . - . ID=gene-VA249_RS02020;Name=VA249_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02020;old_locus_tag=VYA_03890 NZ_AP024165.1 Protein Homology CDS 421056 421421 . - 0 ID=cds-WP_221068631.1;Parent=gene-VA249_RS02020;Dbxref=Genbank:WP_221068631.1;Name=WP_221068631.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006072695.1;locus_tag=VA249_RS02020;product=YraN family protein;protein_id=WP_221068631.1;transl_table=11 NZ_AP024165.1 RefSeq gene 421411 423222 . - . ID=gene-VA249_RS02025;Name=VA249_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02025;old_locus_tag=VYA_03900 NZ_AP024165.1 Protein Homology CDS 421411 423222 . - 0 ID=cds-WP_221068632.1;Parent=gene-VA249_RS02025;Dbxref=Genbank:WP_221068632.1;Name=WP_221068632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194001.1;locus_tag=VA249_RS02025;product=penicillin-binding protein activator;protein_id=WP_221068632.1;transl_table=11 NZ_AP024165.1 RefSeq gene 423291 424154 . + . ID=gene-VA249_RS02030;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=VA249_RS02030;old_locus_tag=VYA_03910 NZ_AP024165.1 Protein Homology CDS 423291 424154 . + 0 ID=cds-WP_211915418.1;Parent=gene-VA249_RS02030;Dbxref=Genbank:WP_211915418.1;Name=WP_211915418.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205758.1;locus_tag=VA249_RS02030;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_211915418.1;transl_table=11 NZ_AP024165.1 RefSeq gene 424436 424882 . + . ID=gene-VA249_RS02035;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=VA249_RS02035 NZ_AP024165.1 cmsearch RNase_P_RNA 424436 424882 . + . ID=rna-VA249_RS02035;Parent=gene-VA249_RS02035;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02035;product=RNase P RNA component class A NZ_AP024165.1 cmsearch exon 424436 424882 . + . ID=exon-VA249_RS02035-1;Parent=rna-VA249_RS02035;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02035;product=RNase P RNA component class A NZ_AP024165.1 RefSeq gene 425060 426010 . + . ID=gene-VA249_RS02040;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=VA249_RS02040;old_locus_tag=VYA_03930 NZ_AP024165.1 Protein Homology CDS 425060 426010 . + 0 ID=cds-WP_221068633.1;Parent=gene-VA249_RS02040;Dbxref=Genbank:WP_221068633.1;Name=WP_221068633.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127227.1;locus_tag=VA249_RS02040;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_221068633.1;transl_table=11 NZ_AP024165.1 RefSeq gene 426016 426333 . + . ID=gene-VA249_RS02045;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=VA249_RS02045;old_locus_tag=VYA_03940 NZ_AP024165.1 Protein Homology CDS 426016 426333 . + 0 ID=cds-WP_128811677.1;Parent=gene-VA249_RS02045;Dbxref=Genbank:WP_128811677.1;Name=WP_128811677.1;Ontology_term=GO:0000910,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral component of membrane|0016021||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428577.1;locus_tag=VA249_RS02045;product=cell division protein FtsL;protein_id=WP_128811677.1;transl_table=11 NZ_AP024165.1 RefSeq gene 426330 428126 . + . ID=gene-VA249_RS02050;Name=VA249_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02050;old_locus_tag=VYA_03950 NZ_AP024165.1 Protein Homology CDS 426330 428126 . + 0 ID=cds-WP_221068634.1;Parent=gene-VA249_RS02050;Dbxref=Genbank:WP_221068634.1;Name=WP_221068634.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016799162.1;locus_tag=VA249_RS02050;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_221068634.1;transl_table=11 NZ_AP024165.1 RefSeq gene 428199 429680 . + . ID=gene-VA249_RS02055;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=VA249_RS02055;old_locus_tag=VYA_03960 NZ_AP024165.1 Protein Homology CDS 428199 429680 . + 0 ID=cds-WP_221068635.1;Parent=gene-VA249_RS02055;Dbxref=Genbank:WP_221068635.1;Name=WP_221068635.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043877370.1;locus_tag=VA249_RS02055;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_221068635.1;transl_table=11 NZ_AP024165.1 RefSeq gene 429677 431041 . + . ID=gene-VA249_RS02060;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=VA249_RS02060;old_locus_tag=VYA_03970 NZ_AP024165.1 Protein Homology CDS 429677 431041 . + 0 ID=cds-WP_221068636.1;Parent=gene-VA249_RS02060;Dbxref=Genbank:WP_221068636.1;Name=WP_221068636.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646527.1;locus_tag=VA249_RS02060;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_221068636.1;transl_table=11 NZ_AP024165.1 RefSeq gene 431041 432123 . + . ID=gene-VA249_RS02065;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=VA249_RS02065;old_locus_tag=VYA_03980 NZ_AP024165.1 Protein Homology CDS 431041 432123 . + 0 ID=cds-WP_128811673.1;Parent=gene-VA249_RS02065;Dbxref=Genbank:WP_128811673.1;Name=WP_128811673.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011149501.1;locus_tag=VA249_RS02065;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_128811673.1;transl_table=11 NZ_AP024165.1 RefSeq gene 432162 433475 . + . ID=gene-VA249_RS02070;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=VA249_RS02070;old_locus_tag=VYA_03990 NZ_AP024165.1 Protein Homology CDS 432162 433475 . + 0 ID=cds-WP_221068637.1;Parent=gene-VA249_RS02070;Dbxref=Genbank:WP_221068637.1;Name=WP_221068637.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011149502.1;locus_tag=VA249_RS02070;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_221068637.1;transl_table=11 NZ_AP024165.1 RefSeq gene 433494 434690 . + . ID=gene-VA249_RS02075;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=VA249_RS02075;old_locus_tag=VYA_04000 NZ_AP024165.1 Protein Homology CDS 433494 434690 . + 0 ID=cds-WP_221068638.1;Parent=gene-VA249_RS02075;Dbxref=Genbank:WP_221068638.1;Name=WP_221068638.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126986.1;locus_tag=VA249_RS02075;product=cell division protein FtsW;protein_id=WP_221068638.1;transl_table=11 NZ_AP024165.1 RefSeq gene 434677 435744 . + . ID=gene-VA249_RS02080;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=VA249_RS02080;old_locus_tag=VYA_04010 NZ_AP024165.1 Protein Homology CDS 434677 435744 . + 0 ID=cds-WP_221068639.1;Parent=gene-VA249_RS02080;Dbxref=Genbank:WP_221068639.1;Name=WP_221068639.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194008.1;locus_tag=VA249_RS02080;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_221068639.1;transl_table=11 NZ_AP024165.1 RefSeq gene 435767 437227 . + . ID=gene-VA249_RS02085;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=VA249_RS02085;old_locus_tag=VYA_04020 NZ_AP024165.1 Protein Homology CDS 435767 437227 . + 0 ID=cds-WP_164837220.1;Parent=gene-VA249_RS02085;Dbxref=Genbank:WP_164837220.1;Name=WP_164837220.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005387395.1;locus_tag=VA249_RS02085;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_164837220.1;transl_table=11 NZ_AP024165.1 RefSeq gene 437414 438199 . + . ID=gene-VA249_RS02090;Name=VA249_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02090;old_locus_tag=VYA_04030 NZ_AP024165.1 Protein Homology CDS 437414 438199 . + 0 ID=cds-WP_128812334.1;Parent=gene-VA249_RS02090;Dbxref=Genbank:WP_128812334.1;Name=WP_128812334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436132.1;locus_tag=VA249_RS02090;product=cell division protein FtsQ/DivIB;protein_id=WP_128812334.1;transl_table=11 NZ_AP024165.1 RefSeq gene 438192 439460 . + . ID=gene-VA249_RS02095;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=VA249_RS02095;old_locus_tag=VYA_04040 NZ_AP024165.1 Protein Homology CDS 438192 439460 . + 0 ID=cds-WP_128811668.1;Parent=gene-VA249_RS02095;Dbxref=Genbank:WP_128811668.1;Name=WP_128811668.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000167613.1;locus_tag=VA249_RS02095;product=cell division protein FtsA;protein_id=WP_128811668.1;transl_table=11 NZ_AP024165.1 RefSeq gene 439491 440726 . + . ID=gene-VA249_RS02100;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=VA249_RS02100;old_locus_tag=VYA_04050 NZ_AP024165.1 Protein Homology CDS 439491 440726 . + 0 ID=cds-WP_221068640.1;Parent=gene-VA249_RS02100;Dbxref=Genbank:WP_221068640.1;Name=WP_221068640.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434749.1;locus_tag=VA249_RS02100;product=cell division protein FtsZ;protein_id=WP_221068640.1;transl_table=11 NZ_AP024165.1 RefSeq gene 440828 441745 . + . ID=gene-VA249_RS02105;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=VA249_RS02105;old_locus_tag=VYA_04060 NZ_AP024165.1 Protein Homology CDS 440828 441745 . + 0 ID=cds-WP_128811666.1;Parent=gene-VA249_RS02105;Dbxref=Genbank:WP_128811666.1;Name=WP_128811666.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012551094.1;locus_tag=VA249_RS02105;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_128811666.1;transl_table=11 NZ_AP024165.1 RefSeq gene 441862 442320 . - . ID=gene-VA249_RS02110;Name=VA249_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02110;old_locus_tag=VYA_04070 NZ_AP024165.1 Protein Homology CDS 441862 442320 . - 0 ID=cds-WP_221068641.1;Parent=gene-VA249_RS02110;Dbxref=Genbank:WP_221068641.1;Name=WP_221068641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528694.1;locus_tag=VA249_RS02110;product=DciA family protein;protein_id=WP_221068641.1;transl_table=11 NZ_AP024165.1 RefSeq gene 442740 445469 . + . ID=gene-VA249_RS02115;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=VA249_RS02115;old_locus_tag=VYA_04080 NZ_AP024165.1 Protein Homology CDS 442740 445469 . + 0 ID=cds-WP_211915408.1;Parent=gene-VA249_RS02115;Dbxref=Genbank:WP_211915408.1;Name=WP_211915408.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005480838.1;locus_tag=VA249_RS02115;product=preprotein translocase subunit SecA;protein_id=WP_211915408.1;transl_table=11 NZ_AP024165.1 RefSeq gene 445543 445941 . + . ID=gene-VA249_RS02120;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=VA249_RS02120;old_locus_tag=VYA_04090 NZ_AP024165.1 Protein Homology CDS 445543 445941 . + 0 ID=cds-WP_221068642.1;Parent=gene-VA249_RS02120;Dbxref=Genbank:WP_221068642.1;Name=WP_221068642.1;Ontology_term=GO:0006281,GO:0016818;gbkey=CDS;gene=mutT;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008222857.1;locus_tag=VA249_RS02120;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_221068642.1;transl_table=11 NZ_AP024165.1 RefSeq gene 446054 446863 . + . ID=gene-VA249_RS02125;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=VA249_RS02125;old_locus_tag=VYA_04100 NZ_AP024165.1 Protein Homology CDS 446054 446863 . + 0 ID=cds-WP_221068643.1;Parent=gene-VA249_RS02125;Dbxref=Genbank:WP_221068643.1;Name=WP_221068643.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017421307.1;locus_tag=VA249_RS02125;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_221068643.1;transl_table=11 NZ_AP024165.1 RefSeq gene 447345 448484 . + . ID=gene-VA249_RS02130;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=VA249_RS02130;old_locus_tag=VYA_04110 NZ_AP024165.1 Protein Homology CDS 447345 448484 . + 0 ID=cds-WP_077261904.1;Parent=gene-VA249_RS02130;Dbxref=Genbank:WP_077261904.1;Name=WP_077261904.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004744942.1;locus_tag=VA249_RS02130;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_077261904.1;transl_table=11 NZ_AP024165.1 RefSeq gene 448501 451734 . + . ID=gene-VA249_RS02135;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=VA249_RS02135;old_locus_tag=VYA_04120 NZ_AP024165.1 Protein Homology CDS 448501 451734 . + 0 ID=cds-WP_221068644.1;Parent=gene-VA249_RS02135;Dbxref=Genbank:WP_221068644.1;Name=WP_221068644.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078652.1;locus_tag=VA249_RS02135;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_221068644.1;transl_table=11 NZ_AP024165.1 RefSeq gene 451935 452714 . + . ID=gene-VA249_RS02140;Name=VA249_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02140;old_locus_tag=VYA_04130 NZ_AP024165.1 Protein Homology CDS 451935 452714 . + 0 ID=cds-WP_221068645.1;Parent=gene-VA249_RS02140;Dbxref=Genbank:WP_221068645.1;Name=WP_221068645.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646540.1;locus_tag=VA249_RS02140;product=TSUP family transporter;protein_id=WP_221068645.1;transl_table=11 NZ_AP024165.1 RefSeq gene 452650 453510 . - . ID=gene-VA249_RS02145;Name=VA249_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02145;old_locus_tag=VYA_04140 NZ_AP024165.1 Protein Homology CDS 452650 453510 . - 0 ID=cds-WP_221068646.1;Parent=gene-VA249_RS02145;Dbxref=Genbank:WP_221068646.1;Name=WP_221068646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230815.1;locus_tag=VA249_RS02145;product=LysR family transcriptional regulator;protein_id=WP_221068646.1;transl_table=11 NZ_AP024165.1 RefSeq gene 453640 454260 . - . ID=gene-VA249_RS02150;Name=VA249_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02150;old_locus_tag=VYA_04150 NZ_AP024165.1 Protein Homology CDS 453640 454260 . - 0 ID=cds-WP_128811657.1;Parent=gene-VA249_RS02150;Dbxref=Genbank:WP_128811657.1;Name=WP_128811657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381506.1;locus_tag=VA249_RS02150;product=TRIC cation channel family protein;protein_id=WP_128811657.1;transl_table=11 NZ_AP024165.1 RefSeq gene 454337 455161 . - . ID=gene-VA249_RS02155;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=VA249_RS02155;old_locus_tag=VYA_04160 NZ_AP024165.1 Protein Homology CDS 454337 455161 . - 0 ID=cds-WP_221068647.1;Parent=gene-VA249_RS02155;Dbxref=Genbank:WP_221068647.1;Name=WP_221068647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707723.1;locus_tag=VA249_RS02155;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_221068647.1;transl_table=11 NZ_AP024165.1 RefSeq gene 455161 456114 . - . ID=gene-VA249_RS02160;Name=VA249_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02160;old_locus_tag=VYA_04170 NZ_AP024165.1 Protein Homology CDS 455161 456114 . - 0 ID=cds-WP_221068648.1;Parent=gene-VA249_RS02160;Dbxref=Genbank:WP_221068648.1;Name=WP_221068648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194017.1;locus_tag=VA249_RS02160;product=cobalamin biosynthesis family protein;protein_id=WP_221068648.1;transl_table=11 NZ_AP024165.1 RefSeq gene 456129 456824 . - . ID=gene-VA249_RS02165;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=VA249_RS02165;old_locus_tag=VYA_04180 NZ_AP024165.1 Protein Homology CDS 456129 456824 . - 0 ID=cds-WP_221068651.1;Parent=gene-VA249_RS02165;Dbxref=Genbank:WP_221068651.1;Name=WP_221068651.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011149517.1;locus_tag=VA249_RS02165;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_221068651.1;transl_table=11 NZ_AP024165.1 RefSeq gene 456890 457318 . - . ID=gene-VA249_RS02170;Name=VA249_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02170;old_locus_tag=VYA_04190 NZ_AP024165.1 Protein Homology CDS 456890 457318 . - 0 ID=cds-WP_221068652.1;Parent=gene-VA249_RS02170;Dbxref=Genbank:WP_221068652.1;Name=WP_221068652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127004.1;locus_tag=VA249_RS02170;product=DUF1499 domain-containing protein;protein_id=WP_221068652.1;transl_table=11 NZ_AP024165.1 RefSeq gene 457409 458821 . - . ID=gene-VA249_RS02175;Name=VA249_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02175;old_locus_tag=VYA_04200 NZ_AP024165.1 Protein Homology CDS 457409 458821 . - 0 ID=cds-WP_221068654.1;Parent=gene-VA249_RS02175;Dbxref=Genbank:WP_221068654.1;Name=WP_221068654.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004415502.1;locus_tag=VA249_RS02175;product=FAD-dependent oxidoreductase;protein_id=WP_221068654.1;transl_table=11 NZ_AP024165.1 RefSeq gene 458842 463305 . - . ID=gene-VA249_RS02180;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=VA249_RS02180;old_locus_tag=VYA_04210 NZ_AP024165.1 Protein Homology CDS 458842 463305 . - 0 ID=cds-WP_221068656.1;Parent=gene-VA249_RS02180;Dbxref=Genbank:WP_221068656.1;Name=WP_221068656.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240200.1;locus_tag=VA249_RS02180;product=glutamate synthase large subunit;protein_id=WP_221068656.1;transl_table=11 NZ_AP024165.1 RefSeq gene 463758 465227 . - . ID=gene-VA249_RS02185;Name=VA249_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02185;old_locus_tag=VYA_04220 NZ_AP024165.1 Protein Homology CDS 463758 465227 . - 0 ID=cds-WP_221068657.1;Parent=gene-VA249_RS02185;Dbxref=Genbank:WP_221068657.1;Name=WP_221068657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513717.1;locus_tag=VA249_RS02185;product=glutamate synthase subunit beta;protein_id=WP_221068657.1;transl_table=11 NZ_AP024165.1 RefSeq gene 465227 469777 . - . ID=gene-VA249_RS02190;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=VA249_RS02190;old_locus_tag=VYA_04230 NZ_AP024165.1 Protein Homology CDS 465227 469777 . - 0 ID=cds-WP_221068658.1;Parent=gene-VA249_RS02190;Dbxref=Genbank:WP_221068658.1;Name=WP_221068658.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445914.1;locus_tag=VA249_RS02190;product=glutamate synthase large subunit;protein_id=WP_221068658.1;transl_table=11 NZ_AP024165.1 RefSeq gene 470330 471274 . + . ID=gene-VA249_RS02195;Name=VA249_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02195;old_locus_tag=VYA_04240 NZ_AP024165.1 Protein Homology CDS 470330 471274 . + 0 ID=cds-WP_211915397.1;Parent=gene-VA249_RS02195;Dbxref=Genbank:WP_211915397.1;Name=WP_211915397.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009702700.1;locus_tag=VA249_RS02195;product=TIGR01212 family radical SAM protein;protein_id=WP_211915397.1;transl_table=11 NZ_AP024165.1 RefSeq gene 471585 473945 . + . ID=gene-VA249_RS02200;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=VA249_RS02200;old_locus_tag=VYA_04250 NZ_AP024165.1 Protein Homology CDS 471585 473945 . + 0 ID=cds-WP_221068659.1;Parent=gene-VA249_RS02200;Dbxref=Genbank:WP_221068659.1;Name=WP_221068659.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=arcB;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425383.1;locus_tag=VA249_RS02200;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_221068659.1;transl_table=11 NZ_AP024165.1 RefSeq gene 473947 474396 . + . ID=gene-VA249_RS02205;Name=VA249_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02205;old_locus_tag=VYA_04260 NZ_AP024165.1 Protein Homology CDS 473947 474396 . + 0 ID=cds-WP_221068660.1;Parent=gene-VA249_RS02205;Dbxref=Genbank:WP_221068660.1;Name=WP_221068660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445922.1;locus_tag=VA249_RS02205;product=hypothetical protein;protein_id=WP_221068660.1;transl_table=11 NZ_AP024165.1 RefSeq gene 474466 475182 . - . ID=gene-VA249_RS02210;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=VA249_RS02210;old_locus_tag=VYA_04270 NZ_AP024165.1 Protein Homology CDS 474466 475182 . - 0 ID=cds-WP_211915394.1;Parent=gene-VA249_RS02210;Dbxref=Genbank:WP_211915394.1;Name=WP_211915394.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599232.1;locus_tag=VA249_RS02210;product=two-component system response regulator ArcA;protein_id=WP_211915394.1;transl_table=11 NZ_AP024165.1 RefSeq gene 475544 475951 . + . ID=gene-VA249_RS02215;Name=VA249_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02215;old_locus_tag=VYA_04280 NZ_AP024165.1 Protein Homology CDS 475544 475951 . + 0 ID=cds-WP_221068661.1;Parent=gene-VA249_RS02215;Dbxref=Genbank:WP_221068661.1;Name=WP_221068661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447853.1;locus_tag=VA249_RS02215;product=DUF3293 domain-containing protein;protein_id=WP_221068661.1;transl_table=11 NZ_AP024165.1 RefSeq gene 476005 476487 . + . ID=gene-VA249_RS02220;Name=VA249_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02220;old_locus_tag=VYA_04290 NZ_AP024165.1 Protein Homology CDS 476005 476487 . + 0 ID=cds-WP_128811645.1;Parent=gene-VA249_RS02220;Dbxref=Genbank:WP_128811645.1;Name=WP_128811645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646559.1;locus_tag=VA249_RS02220;product=putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase;protein_id=WP_128811645.1;transl_table=11 NZ_AP024165.1 RefSeq gene 476484 476954 . - . ID=gene-VA249_RS02225;Name=VA249_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02225;old_locus_tag=VYA_04300 NZ_AP024165.1 Protein Homology CDS 476484 476954 . - 0 ID=cds-WP_221068662.1;Parent=gene-VA249_RS02225;Dbxref=Genbank:WP_221068662.1;Name=WP_221068662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528648.1;locus_tag=VA249_RS02225;product=ribonuclease regulator;protein_id=WP_221068662.1;transl_table=11 NZ_AP024165.1 cmsearch sequence_feature 477383 477502 . + . ID=id-NZ_AP024165.1:477383..477502;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_AP024165.1 RefSeq gene 477556 480015 . + . ID=gene-VA249_RS02230;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=VA249_RS02230;old_locus_tag=VYA_04310 NZ_AP024165.1 Protein Homology CDS 477556 480015 . + 0 ID=cds-WP_221068663.1;Parent=gene-VA249_RS02230;Dbxref=Genbank:WP_221068663.1;Name=WP_221068663.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264657.1;locus_tag=VA249_RS02230;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_221068663.1;transl_table=11 NZ_AP024165.1 RefSeq gene 480036 480992 . + . ID=gene-VA249_RS02235;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=VA249_RS02235;old_locus_tag=VYA_04320 NZ_AP024165.1 Protein Homology CDS 480036 480992 . + 0 ID=cds-WP_221069782.1;Parent=gene-VA249_RS02235;Dbxref=Genbank:WP_221069782.1;Name=WP_221069782.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848413.1;locus_tag=VA249_RS02235;product=homoserine kinase;protein_id=WP_221069782.1;transl_table=11 NZ_AP024165.1 RefSeq gene 480989 482269 . + . ID=gene-VA249_RS02240;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=VA249_RS02240;old_locus_tag=VYA_04330 NZ_AP024165.1 Protein Homology CDS 480989 482269 . + 0 ID=cds-WP_221068664.1;Parent=gene-VA249_RS02240;Dbxref=Genbank:WP_221068664.1;Name=WP_221068664.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009702444.1;locus_tag=VA249_RS02240;product=threonine synthase;protein_id=WP_221068664.1;transl_table=11 NZ_AP024165.1 RefSeq gene 482392 482769 . - . ID=gene-VA249_RS02245;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=VA249_RS02245;old_locus_tag=VYA_04340 NZ_AP024165.1 Protein Homology CDS 482392 482769 . - 0 ID=cds-WP_128811641.1;Parent=gene-VA249_RS02245;Dbxref=Genbank:WP_128811641.1;Name=WP_128811641.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020330525.1;locus_tag=VA249_RS02245;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_128811641.1;transl_table=11 NZ_AP024165.1 RefSeq gene 483096 483986 . + . ID=gene-VA249_RS02250;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=VA249_RS02250;old_locus_tag=VYA_04350 NZ_AP024165.1 Protein Homology CDS 483096 483986 . + 0 ID=cds-WP_221068666.1;Parent=gene-VA249_RS02250;Dbxref=Genbank:WP_221068666.1;Name=WP_221068666.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190099.1;locus_tag=VA249_RS02250;product=deoxyribonuclease IV;protein_id=WP_221068666.1;transl_table=11 NZ_AP024165.1 RefSeq gene 484317 484997 . + . ID=gene-VA249_RS02255;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=VA249_RS02255;old_locus_tag=VYA_04360 NZ_AP024165.1 Protein Homology CDS 484317 484997 . + 0 ID=cds-WP_221068668.1;Parent=gene-VA249_RS02255;Dbxref=Genbank:WP_221068668.1;Name=WP_221068668.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335913.1;locus_tag=VA249_RS02255;product=uracil-DNA glycosylase;protein_id=WP_221068668.1;transl_table=11 NZ_AP024165.1 RefSeq gene 485139 485690 . + . ID=gene-VA249_RS02260;Name=VA249_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02260;old_locus_tag=VYA_04370 NZ_AP024165.1 Protein Homology CDS 485139 485690 . + 0 ID=cds-WP_221068670.1;Parent=gene-VA249_RS02260;Dbxref=Genbank:WP_221068670.1;Name=WP_221068670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127021.1;locus_tag=VA249_RS02260;product=hemerythrin domain-containing protein;protein_id=WP_221068670.1;transl_table=11 NZ_AP024165.1 RefSeq gene 485916 486101 . - . ID=gene-VA249_RS02265;Name=VA249_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02265;old_locus_tag=VYA_04380 NZ_AP024165.1 Protein Homology CDS 485916 486101 . - 0 ID=cds-WP_211915388.1;Parent=gene-VA249_RS02265;Dbxref=Genbank:WP_211915388.1;Name=WP_211915388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447876.1;locus_tag=VA249_RS02265;product=DUF3545 family protein;protein_id=WP_211915388.1;transl_table=11 NZ_AP024165.1 RefSeq gene 486820 488256 . + . ID=gene-VA249_RS02270;Name=VA249_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02270;old_locus_tag=VYA_04390 NZ_AP024165.1 Protein Homology CDS 486820 488256 . + 0 ID=cds-WP_128811635.1;Parent=gene-VA249_RS02270;Dbxref=Genbank:WP_128811635.1;Name=WP_128811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447878.1;locus_tag=VA249_RS02270;product=sodium:alanine symporter family protein;protein_id=WP_128811635.1;transl_table=11 NZ_AP024165.1 RefSeq gene 488443 489669 . + . ID=gene-VA249_RS02275;Name=VA249_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02275;old_locus_tag=VYA_04400 NZ_AP024165.1 Protein Homology CDS 488443 489669 . + 0 ID=cds-WP_176703889.1;Parent=gene-VA249_RS02275;Dbxref=Genbank:WP_176703889.1;Name=WP_176703889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088853.1;locus_tag=VA249_RS02275;product=site-specific integrase;protein_id=WP_176703889.1;transl_table=11 NZ_AP024165.1 RefSeq gene 489666 491411 . + . ID=gene-VA249_RS02280;Name=VA249_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02280;old_locus_tag=VYA_04410 NZ_AP024165.1 Protein Homology CDS 489666 491411 . + 0 ID=cds-WP_176703888.1;Parent=gene-VA249_RS02280;Dbxref=Genbank:WP_176703888.1;Name=WP_176703888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088854.1;locus_tag=VA249_RS02280;product=hypothetical protein;protein_id=WP_176703888.1;transl_table=11 NZ_AP024165.1 RefSeq gene 491414 493576 . + . ID=gene-VA249_RS02285;Name=VA249_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02285;old_locus_tag=VYA_04420 NZ_AP024165.1 Protein Homology CDS 491414 493576 . + 0 ID=cds-WP_176703887.1;Parent=gene-VA249_RS02285;Dbxref=Genbank:WP_176703887.1;Name=WP_176703887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088855.1;locus_tag=VA249_RS02285;product=site-specific integrase;protein_id=WP_176703887.1;transl_table=11 NZ_AP024165.1 RefSeq gene 493576 493983 . + . ID=gene-VA249_RS02290;Name=VA249_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02290;old_locus_tag=VYA_04430 NZ_AP024165.1 Protein Homology CDS 493576 493983 . + 0 ID=cds-WP_176703886.1;Parent=gene-VA249_RS02290;Dbxref=Genbank:WP_176703886.1;Name=WP_176703886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074769.1;locus_tag=VA249_RS02290;product=hypothetical protein;protein_id=WP_176703886.1;transl_table=11 NZ_AP024165.1 RefSeq gene 494141 494989 . - . ID=gene-VA249_RS02295;Name=VA249_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02295;old_locus_tag=VYA_04440 NZ_AP024165.1 Protein Homology CDS 494141 494989 . - 0 ID=cds-WP_012774820.1;Parent=gene-VA249_RS02295;Dbxref=Genbank:WP_012774820.1;Name=WP_012774820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741153.1;locus_tag=VA249_RS02295;product=GMA family class A beta-lactamase GMA-1;protein_id=WP_012774820.1;transl_table=11 NZ_AP024165.1 RefSeq gene 495545 496321 . + . ID=gene-VA249_RS02300;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=VA249_RS02300;old_locus_tag=VYA_04450 NZ_AP024165.1 Protein Homology CDS 495545 496321 . + 0 ID=cds-WP_221068673.1;Parent=gene-VA249_RS02300;Dbxref=Genbank:WP_221068673.1;Name=WP_221068673.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012603257.1;locus_tag=VA249_RS02300;product=peroxide stress protein YaaA;protein_id=WP_221068673.1;transl_table=11 NZ_AP024165.1 RefSeq gene 496436 497659 . - . ID=gene-VA249_RS02305;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=VA249_RS02305;old_locus_tag=VYA_04460 NZ_AP024165.1 Protein Homology CDS 496436 497659 . - 0 ID=cds-WP_128811633.1;Parent=gene-VA249_RS02305;Dbxref=Genbank:WP_128811633.1;Name=WP_128811633.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230842.1;locus_tag=VA249_RS02305;product=ATP-dependent RNA helicase SrmB;protein_id=WP_128811633.1;transl_table=11 NZ_AP024165.1 RefSeq gene 497767 498486 . - . ID=gene-VA249_RS02310;Name=VA249_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02310;old_locus_tag=VYA_04470 NZ_AP024165.1 Protein Homology CDS 497767 498486 . - 0 ID=cds-WP_221068675.1;Parent=gene-VA249_RS02310;Dbxref=Genbank:WP_221068675.1;Name=WP_221068675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646574.1;locus_tag=VA249_RS02310;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_221068675.1;transl_table=11 NZ_AP024165.1 RefSeq gene 498914 500227 . + . ID=gene-VA249_RS02315;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=VA249_RS02315;old_locus_tag=VYA_04480 NZ_AP024165.1 Protein Homology CDS 498914 500227 . + 0 ID=cds-WP_128811631.1;Parent=gene-VA249_RS02315;Dbxref=Genbank:WP_128811631.1;Name=WP_128811631.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010445961.1;locus_tag=VA249_RS02315;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_128811631.1;transl_table=11 NZ_AP024165.1 RefSeq gene 500371 500889 . - . ID=gene-VA249_RS02320;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=VA249_RS02320;old_locus_tag=VYA_04490 NZ_AP024165.1 Protein Homology CDS 500371 500889 . - 0 ID=cds-WP_221068676.1;Parent=gene-VA249_RS02320;Dbxref=Genbank:WP_221068676.1;Name=WP_221068676.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848425.1;locus_tag=VA249_RS02320;product=flavodoxin FldB;protein_id=WP_221068676.1;transl_table=11 NZ_AP024165.1 RefSeq gene 501047 501964 . + . ID=gene-VA249_RS02325;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=VA249_RS02325;old_locus_tag=VYA_04500 NZ_AP024165.1 Protein Homology CDS 501047 501964 . + 0 ID=cds-WP_128811629.1;Parent=gene-VA249_RS02325;Dbxref=Genbank:WP_128811629.1;Name=WP_128811629.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005459400.1;locus_tag=VA249_RS02325;product=site-specific tyrosine recombinase XerD;protein_id=WP_128811629.1;transl_table=11 NZ_AP024165.1 RefSeq gene 502030 502818 . + . ID=gene-VA249_RS02330;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=VA249_RS02330;old_locus_tag=VYA_04510 NZ_AP024165.1 Protein Homology CDS 502030 502818 . + 0 ID=cds-WP_128811628.1;Parent=gene-VA249_RS02330;Dbxref=Genbank:WP_128811628.1;Name=WP_128811628.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230847.1;locus_tag=VA249_RS02330;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_128811628.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 502865 504603 . + . ID=gene-VA249_RS02335;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=pseudogene;locus_tag=VA249_RS02335;old_locus_tag=VYA_04520;pseudo=true NZ_AP024165.1 Protein Homology CDS 502865 504603 . + 0 ID=cds-VA249_RS02335;Parent=gene-VA249_RS02335;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000570143.1;locus_tag=VA249_RS02335;product=single-stranded-DNA-specific exonuclease RecJ;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 504775 505873 . + . ID=gene-VA249_RS02340;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=VA249_RS02340;old_locus_tag=VYA_04540 NZ_AP024165.1 Protein Homology CDS 504775 504849 . + 0 ID=cds-WP_211920074.1;Parent=gene-VA249_RS02340;Dbxref=Genbank:WP_211920074.1;Name=WP_211920074.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895430.1;locus_tag=VA249_RS02340;product=peptide chain release factor 2;protein_id=WP_211920074.1;transl_table=11 NZ_AP024165.1 Protein Homology CDS 504851 505873 . + 0 ID=cds-WP_211920074.1;Parent=gene-VA249_RS02340;Dbxref=Genbank:WP_211920074.1;Name=WP_211920074.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895430.1;locus_tag=VA249_RS02340;product=peptide chain release factor 2;protein_id=WP_211920074.1;transl_table=11 NZ_AP024165.1 RefSeq gene 505908 507440 . + . ID=gene-VA249_RS02345;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=VA249_RS02345;old_locus_tag=VYA_04550 NZ_AP024165.1 Protein Homology CDS 505908 507440 . + 0 ID=cds-WP_221068678.1;Parent=gene-VA249_RS02345;Dbxref=Genbank:WP_221068678.1;Name=WP_221068678.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005459407.1;locus_tag=VA249_RS02345;product=lysine--tRNA ligase;protein_id=WP_221068678.1;transl_table=11 NZ_AP024165.1 RefSeq gene 507688 509022 . + . ID=gene-VA249_RS02350;Name=vpsR;gbkey=Gene;gene=vpsR;gene_biotype=protein_coding;locus_tag=VA249_RS02350;old_locus_tag=VYA_04560 NZ_AP024165.1 Protein Homology CDS 507688 509022 . + 0 ID=cds-WP_211920073.1;Parent=gene-VA249_RS02350;Dbxref=Genbank:WP_211920073.1;Name=WP_211920073.1;Note=Not actually a response regulator%2C but instead a cyclic-di-GMP-binding transcription factor.;gbkey=CDS;gene=vpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534149.1;locus_tag=VA249_RS02350;product=sigma-54 dependent transcriptional regulator;protein_id=WP_211920073.1;transl_table=11 NZ_AP024165.1 RefSeq gene 509768 510019 . + . ID=gene-VA249_RS02355;Name=VA249_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02355;old_locus_tag=VYA_04570 NZ_AP024165.1 Protein Homology CDS 509768 510019 . + 0 ID=cds-WP_128811623.1;Parent=gene-VA249_RS02355;Dbxref=Genbank:WP_128811623.1;Name=WP_128811623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735015.1;locus_tag=VA249_RS02355;product=DUF1127 domain-containing protein;protein_id=WP_128811623.1;transl_table=11 NZ_AP024165.1 RefSeq gene 510112 511146 . - . ID=gene-VA249_RS02360;Name=VA249_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02360;old_locus_tag=VYA_04580 NZ_AP024165.1 Protein Homology CDS 510112 511146 . - 0 ID=cds-WP_221068679.1;Parent=gene-VA249_RS02360;Dbxref=Genbank:WP_221068679.1;Name=WP_221068679.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020430547.1;locus_tag=VA249_RS02360;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_221068679.1;transl_table=11 NZ_AP024165.1 RefSeq gene 511399 511710 . + . ID=gene-VA249_RS02365;Name=VA249_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02365;old_locus_tag=VYA_04590 NZ_AP024165.1 Protein Homology CDS 511399 511710 . + 0 ID=cds-WP_128811621.1;Parent=gene-VA249_RS02365;Dbxref=Genbank:WP_128811621.1;Name=WP_128811621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017056116.1;locus_tag=VA249_RS02365;product=DUF6482 family protein;protein_id=WP_128811621.1;transl_table=11 NZ_AP024165.1 RefSeq gene 511770 512450 . - . ID=gene-VA249_RS02370;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=VA249_RS02370;old_locus_tag=VYA_04600 NZ_AP024165.1 Protein Homology CDS 511770 512450 . - 0 ID=cds-WP_211920070.1;Parent=gene-VA249_RS02370;Dbxref=Genbank:WP_211920070.1;Name=WP_211920070.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296255.1;locus_tag=VA249_RS02370;product=DNA mismatch repair endonuclease MutH;protein_id=WP_211920070.1;transl_table=11 NZ_AP024165.1 RefSeq gene 513069 513587 . + . ID=gene-VA249_RS02375;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=VA249_RS02375;old_locus_tag=VYA_04610 NZ_AP024165.1 Protein Homology CDS 513069 513587 . + 0 ID=cds-WP_128811618.1;Parent=gene-VA249_RS02375;Dbxref=Genbank:WP_128811618.1;Name=WP_128811618.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844148.1;locus_tag=VA249_RS02375;product=RNA pyrophosphohydrolase;protein_id=WP_128811618.1;transl_table=11 NZ_AP024165.1 RefSeq gene 513597 515843 . + . ID=gene-VA249_RS02380;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=VA249_RS02380;old_locus_tag=VYA_04620 NZ_AP024165.1 Protein Homology CDS 513597 515843 . + 0 ID=cds-WP_221068681.1;Parent=gene-VA249_RS02380;Dbxref=Genbank:WP_221068681.1;Name=WP_221068681.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952229.1;locus_tag=VA249_RS02380;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_221068681.1;transl_table=11 NZ_AP024165.1 RefSeq gene 515850 516641 . + . ID=gene-VA249_RS02385;Name=VA249_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02385;old_locus_tag=VYA_04630 NZ_AP024165.1 Protein Homology CDS 515850 516641 . + 0 ID=cds-WP_221068683.1;Parent=gene-VA249_RS02385;Dbxref=Genbank:WP_221068683.1;Name=WP_221068683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844150.1;locus_tag=VA249_RS02385;product=sulfite exporter TauE/SafE family protein;protein_id=WP_221068683.1;transl_table=11 NZ_AP024165.1 RefSeq gene 516754 517575 . + . ID=gene-VA249_RS02390;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=VA249_RS02390;old_locus_tag=VYA_04640 NZ_AP024165.1 Protein Homology CDS 516754 517575 . + 0 ID=cds-WP_221068685.1;Parent=gene-VA249_RS02390;Dbxref=Genbank:WP_221068685.1;Name=WP_221068685.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016767730.1;locus_tag=VA249_RS02390;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_221068685.1;transl_table=11 NZ_AP024165.1 RefSeq gene 517585 518436 . + . ID=gene-VA249_RS02395;Name=VA249_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02395;old_locus_tag=VYA_04650 NZ_AP024165.1 Protein Homology CDS 517585 518436 . + 0 ID=cds-WP_221068687.1;Parent=gene-VA249_RS02395;Dbxref=Genbank:WP_221068687.1;Name=WP_221068687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006075639.1;locus_tag=VA249_RS02395;product=thymidylate synthase;protein_id=WP_221068687.1;transl_table=11 NZ_AP024165.1 RefSeq gene 518659 519804 . - . ID=gene-VA249_RS02400;Name=VA249_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02400;old_locus_tag=VYA_04660 NZ_AP024165.1 Protein Homology CDS 518659 519804 . - 0 ID=cds-WP_221069784.1;Parent=gene-VA249_RS02400;Dbxref=Genbank:WP_221069784.1;Name=WP_221069784.1;Ontology_term=GO:0035435,GO:0044341,GO:0005436,GO:0015114,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA,phosphate ion transmembrane transporter activity|0015114||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA,sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006711492.1;locus_tag=VA249_RS02400;product=Na/Pi symporter;protein_id=WP_221069784.1;transl_table=11 NZ_AP024165.1 RefSeq gene 520192 521082 . + . ID=gene-VA249_RS02405;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=VA249_RS02405;old_locus_tag=VYA_04680 NZ_AP024165.1 Protein Homology CDS 520192 521082 . + 0 ID=cds-WP_128811612.1;Parent=gene-VA249_RS02405;Dbxref=Genbank:WP_128811612.1;Name=WP_128811612.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017629799.1;locus_tag=VA249_RS02405;product=transcriptional activator NhaR;protein_id=WP_128811612.1;transl_table=11 NZ_AP024165.1 RefSeq gene 521194 521493 . + . ID=gene-VA249_RS02410;Name=VA249_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02410;old_locus_tag=VYA_04690 NZ_AP024165.1 Protein Homology CDS 521194 521493 . + 0 ID=cds-WP_221068688.1;Parent=gene-VA249_RS02410;Dbxref=Genbank:WP_221068688.1;Name=WP_221068688.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447923.1;locus_tag=VA249_RS02410;product=winged helix-turn-helix domain-containing protein;protein_id=WP_221068688.1;transl_table=11 NZ_AP024165.1 RefSeq gene 521655 521915 . - . ID=gene-VA249_RS02415;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=VA249_RS02415;old_locus_tag=VYA_04700 NZ_AP024165.1 Protein Homology CDS 521655 521915 . - 0 ID=cds-WP_128811610.1;Parent=gene-VA249_RS02415;Dbxref=Genbank:WP_128811610.1;Name=WP_128811610.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447926.1;locus_tag=VA249_RS02415;product=30S ribosomal protein S20;protein_id=WP_128811610.1;transl_table=11 NZ_AP024165.1 RefSeq gene 522209 523771 . + . ID=gene-VA249_RS02420;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=VA249_RS02420;old_locus_tag=VYA_04710 NZ_AP024165.1 Protein Homology CDS 522209 523771 . + 0 ID=cds-WP_221068690.1;Parent=gene-VA249_RS02420;Dbxref=Genbank:WP_221068690.1;Name=WP_221068690.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533259.1;locus_tag=VA249_RS02420;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_221068690.1;transl_table=11 NZ_AP024165.1 RefSeq gene 523841 524776 . + . ID=gene-VA249_RS02425;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=VA249_RS02425;old_locus_tag=VYA_04720 NZ_AP024165.1 Protein Homology CDS 523841 524776 . + 0 ID=cds-WP_221068702.1;Parent=gene-VA249_RS02425;Dbxref=Genbank:WP_221068702.1;Name=WP_221068702.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127045.1;locus_tag=VA249_RS02425;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_221068702.1;transl_table=11 NZ_AP024165.1 RefSeq gene 524841 527687 . + . ID=gene-VA249_RS02430;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=VA249_RS02430;old_locus_tag=VYA_04730 NZ_AP024165.1 Protein Homology CDS 524841 527687 . + 0 ID=cds-WP_221068704.1;Parent=gene-VA249_RS02430;Dbxref=Genbank:WP_221068704.1;Name=WP_221068704.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012842132.1;locus_tag=VA249_RS02430;product=isoleucine--tRNA ligase;protein_id=WP_221068704.1;transl_table=11 NZ_AP024165.1 RefSeq gene 527761 528267 . + . ID=gene-VA249_RS02435;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=VA249_RS02435;old_locus_tag=VYA_04740 NZ_AP024165.1 Protein Homology CDS 527761 528267 . + 0 ID=cds-WP_128811606.1;Parent=gene-VA249_RS02435;Dbxref=Genbank:WP_128811606.1;Name=WP_128811606.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397302.1;locus_tag=VA249_RS02435;product=signal peptidase II;protein_id=WP_128811606.1;transl_table=11 NZ_AP024165.1 RefSeq gene 528399 528830 . + . ID=gene-VA249_RS02440;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=VA249_RS02440;old_locus_tag=VYA_04750 NZ_AP024165.1 Protein Homology CDS 528399 528830 . + 0 ID=cds-WP_128811605.1;Parent=gene-VA249_RS02440;Dbxref=Genbank:WP_128811605.1;Name=WP_128811605.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533267.1;locus_tag=VA249_RS02440;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_128811605.1;transl_table=11 NZ_AP024165.1 RefSeq gene 528855 529820 . + . ID=gene-VA249_RS02445;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=VA249_RS02445;old_locus_tag=VYA_04760 NZ_AP024165.1 Protein Homology CDS 528855 529820 . + 0 ID=cds-WP_221068714.1;Parent=gene-VA249_RS02445;Dbxref=Genbank:WP_221068714.1;Name=WP_221068714.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335931.1;locus_tag=VA249_RS02445;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_221068714.1;transl_table=11 NZ_AP024165.1 RefSeq gene 529957 530685 . - . ID=gene-VA249_RS02450;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=VA249_RS02450;old_locus_tag=VYA_04770 NZ_AP024165.1 Protein Homology CDS 529957 530685 . - 0 ID=cds-WP_221068715.1;Parent=gene-VA249_RS02450;Dbxref=Genbank:WP_221068715.1;Name=WP_221068715.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196205.1;locus_tag=VA249_RS02450;product=two-component system response regulator BtsR;protein_id=WP_221068715.1;transl_table=11 NZ_AP024165.1 RefSeq gene 530709 532388 . - . ID=gene-VA249_RS02455;Name=VA249_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02455;old_locus_tag=VYA_04780 NZ_AP024165.1 Protein Homology CDS 530709 532388 . - 0 ID=cds-WP_221068716.1;Parent=gene-VA249_RS02455;Dbxref=Genbank:WP_221068716.1;Name=WP_221068716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196204.1;locus_tag=VA249_RS02455;product=sensor histidine kinase;protein_id=WP_221068716.1;transl_table=11 NZ_AP024165.1 RefSeq gene 532516 534000 . - . ID=gene-VA249_RS02460;Name=VA249_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02460;old_locus_tag=VYA_04790 NZ_AP024165.1 Protein Homology CDS 532516 534000 . - 0 ID=cds-WP_128811601.1;Parent=gene-VA249_RS02460;Dbxref=Genbank:WP_128811601.1;Name=WP_128811601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017017697.1;locus_tag=VA249_RS02460;product=carbon starvation protein A;protein_id=WP_128811601.1;transl_table=11 NZ_AP024165.1 RefSeq gene 534303 534644 . + . ID=gene-VA249_RS02465;Name=VA249_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02465;old_locus_tag=VYA_04800 NZ_AP024165.1 Protein Homology CDS 534303 534644 . + 0 ID=cds-WP_128811600.1;Parent=gene-VA249_RS02465;Dbxref=Genbank:WP_128811600.1;Name=WP_128811600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460271.1;locus_tag=VA249_RS02465;product=DUF2799 domain-containing protein;protein_id=WP_128811600.1;transl_table=11 NZ_AP024165.1 RefSeq gene 534755 535084 . + . ID=gene-VA249_RS02470;Name=VA249_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02470;old_locus_tag=VYA_04810 NZ_AP024165.1 Protein Homology CDS 534755 535084 . + 0 ID=cds-WP_221068717.1;Parent=gene-VA249_RS02470;Dbxref=Genbank:WP_221068717.1;Name=WP_221068717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697642.1;locus_tag=VA249_RS02470;product=hypothetical protein;protein_id=WP_221068717.1;transl_table=11 NZ_AP024165.1 RefSeq gene 535181 536107 . - . ID=gene-VA249_RS02475;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=VA249_RS02475;old_locus_tag=VYA_04820 NZ_AP024165.1 Protein Homology CDS 535181 536107 . - 0 ID=cds-WP_221068719.1;Parent=gene-VA249_RS02475;Dbxref=Genbank:WP_221068719.1;Name=WP_221068719.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425340.1;locus_tag=VA249_RS02475;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_221068719.1;transl_table=11 NZ_AP024165.1 RefSeq gene 536172 537284 . - . ID=gene-VA249_RS02480;Name=VA249_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02480;old_locus_tag=VYA_04830 NZ_AP024165.1 Protein Homology CDS 536172 537284 . - 0 ID=cds-WP_221068722.1;Parent=gene-VA249_RS02480;Dbxref=Genbank:WP_221068722.1;Name=WP_221068722.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447941.1;locus_tag=VA249_RS02480;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_221068722.1;transl_table=11 NZ_AP024165.1 RefSeq gene 537385 538368 . + . ID=gene-VA249_RS02485;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=VA249_RS02485;old_locus_tag=VYA_04840 NZ_AP024165.1 Protein Homology CDS 537385 538368 . + 0 ID=cds-WP_221068724.1;Parent=gene-VA249_RS02485;Dbxref=Genbank:WP_221068724.1;Name=WP_221068724.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533282.1;locus_tag=VA249_RS02485;product=beta-N-acetylhexosaminidase;protein_id=WP_221068724.1;transl_table=11 NZ_AP024165.1 RefSeq gene 538607 539680 . + . ID=gene-VA249_RS02490;Name=VA249_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02490;old_locus_tag=VYA_04850 NZ_AP024165.1 Protein Homology CDS 538607 539680 . + 0 ID=cds-WP_211920056.1;Parent=gene-VA249_RS02490;Dbxref=Genbank:WP_211920056.1;Name=WP_211920056.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008077190.1;locus_tag=VA249_RS02490;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_211920056.1;transl_table=11 NZ_AP024165.1 RefSeq gene 539705 540832 . + . ID=gene-VA249_RS02495;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=VA249_RS02495;old_locus_tag=VYA_04860 NZ_AP024165.1 Protein Homology CDS 539705 540832 . + 0 ID=cds-WP_051118154.1;Parent=gene-VA249_RS02495;Dbxref=Genbank:WP_051118154.1;Name=WP_051118154.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449486.1;locus_tag=VA249_RS02495;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_051118154.1;transl_table=11 NZ_AP024165.1 RefSeq gene 540918 541919 . - . ID=gene-VA249_RS02500;Name=VA249_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02500;old_locus_tag=VYA_04870 NZ_AP024165.1 Protein Homology CDS 540918 541919 . - 0 ID=cds-WP_221068726.1;Parent=gene-VA249_RS02500;Dbxref=Genbank:WP_221068726.1;Name=WP_221068726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127055.1;locus_tag=VA249_RS02500;product=M23 family metallopeptidase;protein_id=WP_221068726.1;transl_table=11 NZ_AP024165.1 RefSeq gene 541939 542316 . - . ID=gene-VA249_RS02505;Name=VA249_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02505;old_locus_tag=VYA_04880 NZ_AP024165.1 Protein Homology CDS 541939 542316 . - 0 ID=cds-WP_211920054.1;Parent=gene-VA249_RS02505;Dbxref=Genbank:WP_211920054.1;Name=WP_211920054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460291.1;locus_tag=VA249_RS02505;product=PilZ domain-containing protein;protein_id=WP_211920054.1;transl_table=11 NZ_AP024165.1 RefSeq gene 542568 544235 . - . ID=gene-VA249_RS02510;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=VA249_RS02510;old_locus_tag=VYA_04890 NZ_AP024165.1 Protein Homology CDS 542568 544235 . - 0 ID=cds-WP_211920053.1;Parent=gene-VA249_RS02510;Dbxref=Genbank:WP_211920053.1;Name=WP_211920053.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017110510.1;locus_tag=VA249_RS02510;product=energy-dependent translational throttle protein EttA;protein_id=WP_211920053.1;transl_table=11 NZ_AP024165.1 RefSeq gene 544619 546565 . + . ID=gene-VA249_RS02515;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=VA249_RS02515;old_locus_tag=VYA_04900 NZ_AP024165.1 Protein Homology CDS 544619 546565 . + 0 ID=cds-WP_221068728.1;Parent=gene-VA249_RS02515;Dbxref=Genbank:WP_221068728.1;Name=WP_221068728.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197985.1;locus_tag=VA249_RS02515;product=murein transglycosylase;protein_id=WP_221068728.1;transl_table=11 NZ_AP024165.1 RefSeq gene 546579 546881 . + . ID=gene-VA249_RS02520;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=VA249_RS02520;old_locus_tag=VYA_04910 NZ_AP024165.1 Protein Homology CDS 546579 546881 . + 0 ID=cds-WP_221068729.1;Parent=gene-VA249_RS02520;Dbxref=Genbank:WP_221068729.1;Name=WP_221068729.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447954.1;locus_tag=VA249_RS02520;product=trp operon repressor;protein_id=WP_221068729.1;transl_table=11 NZ_AP024165.1 RefSeq gene 546964 547497 . - . ID=gene-VA249_RS02525;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=VA249_RS02525;old_locus_tag=VYA_04920 NZ_AP024165.1 Protein Homology CDS 546964 547497 . - 0 ID=cds-WP_221068731.1;Parent=gene-VA249_RS02525;Dbxref=Genbank:WP_221068731.1;Name=WP_221068731.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190118.1;locus_tag=VA249_RS02525;product=inosine/xanthosine triphosphatase;protein_id=WP_221068731.1;transl_table=11 NZ_AP024165.1 RefSeq gene 547558 548736 . - . ID=gene-VA249_RS02530;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=VA249_RS02530;old_locus_tag=VYA_04930 NZ_AP024165.1 Protein Homology CDS 547558 548736 . - 0 ID=cds-WP_221068733.1;Parent=gene-VA249_RS02530;Dbxref=Genbank:WP_221068733.1;Name=WP_221068733.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017072899.1;locus_tag=VA249_RS02530;product=prephenate dehydratase;protein_id=WP_221068733.1;transl_table=11 NZ_AP024165.1 cmsearch sequence_feature 548750 548871 . - . ID=id-NZ_AP024165.1:548750..548871;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_AP024165.1 RefSeq gene 548979 549305 . - . ID=gene-VA249_RS02535;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=VA249_RS02535;old_locus_tag=VYA_04940 NZ_AP024165.1 Protein Homology CDS 548979 549305 . - 0 ID=cds-WP_128811587.1;Parent=gene-VA249_RS02535;Dbxref=Genbank:WP_128811587.1;Name=WP_128811587.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127060.1;locus_tag=VA249_RS02535;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_128811587.1;transl_table=11 NZ_AP024165.1 RefSeq gene 549739 551232 . - . ID=gene-VA249_RS02540;Name=VA249_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02540;old_locus_tag=VYA_04950 NZ_AP024165.1 Protein Homology CDS 549739 551232 . - 0 ID=cds-WP_221068735.1;Parent=gene-VA249_RS02540;Dbxref=Genbank:WP_221068735.1;Name=WP_221068735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011105683.1;locus_tag=VA249_RS02540;product=lytic transglycosylase F;protein_id=WP_221068735.1;transl_table=11 NZ_AP024165.1 RefSeq gene 551352 552080 . - . ID=gene-VA249_RS02545;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=VA249_RS02545;old_locus_tag=VYA_04960 NZ_AP024165.1 Protein Homology CDS 551352 552080 . - 0 ID=cds-WP_221068737.1;Parent=gene-VA249_RS02545;Dbxref=Genbank:WP_221068737.1;Name=WP_221068737.1;Ontology_term=GO:0065003,GO:0005198,GO:0019867;gbkey=CDS;gene=bamD;go_component=outer membrane|0019867||IEA;go_function=structural molecule activity|0005198||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005381876.1;locus_tag=VA249_RS02545;product=outer membrane protein assembly factor BamD;protein_id=WP_221068737.1;transl_table=11 NZ_AP024165.1 RefSeq gene 552217 553194 . + . ID=gene-VA249_RS02550;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=VA249_RS02550;old_locus_tag=VYA_04970 NZ_AP024165.1 Protein Homology CDS 552217 553194 . + 0 ID=cds-WP_128811585.1;Parent=gene-VA249_RS02550;Dbxref=Genbank:WP_128811585.1;Name=WP_128811585.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335946.1;locus_tag=VA249_RS02550;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_128811585.1;transl_table=11 NZ_AP024165.1 RefSeq gene 553196 553924 . + . ID=gene-VA249_RS02555;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=VA249_RS02555;old_locus_tag=VYA_04980 NZ_AP024165.1 Protein Homology CDS 553196 553924 . + 0 ID=cds-WP_221068739.1;Parent=gene-VA249_RS02555;Dbxref=Genbank:WP_221068739.1;Name=WP_221068739.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447962.1;locus_tag=VA249_RS02555;product=peptidoglycan editing factor PgeF;protein_id=WP_221068739.1;transl_table=11 NZ_AP024165.1 RefSeq gene 554067 556640 . + . ID=gene-VA249_RS02560;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=VA249_RS02560;old_locus_tag=VYA_04990 NZ_AP024165.1 Protein Homology CDS 554067 556640 . + 0 ID=cds-WP_221068741.1;Parent=gene-VA249_RS02560;Dbxref=Genbank:WP_221068741.1;Name=WP_221068741.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004739481.1;locus_tag=VA249_RS02560;product=ATP-dependent chaperone ClpB;protein_id=WP_221068741.1;transl_table=11 NZ_AP024165.1 RefSeq gene 557197 558751 . + . ID=gene-VA249_RS02565;Name=VA249_RS02565;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS02565;old_locus_tag=VYA_r00040 NZ_AP024165.1 cmsearch rRNA 557197 558751 . + . ID=rna-VA249_RS02565;Parent=gene-VA249_RS02565;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02565;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 557197 558751 . + . ID=exon-VA249_RS02565-1;Parent=rna-VA249_RS02565;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02565;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 558888 558963 . + . ID=gene-VA249_RS02570;Name=VA249_RS02570;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS02570;old_locus_tag=VYA_t00120 NZ_AP024165.1 tRNAscan-SE tRNA 558888 558963 . + . ID=rna-VA249_RS02570;Parent=gene-VA249_RS02570;anticodon=(pos:558921..558923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02570;product=tRNA-Ala NZ_AP024165.1 tRNAscan-SE exon 558888 558963 . + . ID=exon-VA249_RS02570-1;Parent=rna-VA249_RS02570;anticodon=(pos:558921..558923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02570;product=tRNA-Ala NZ_AP024165.1 RefSeq gene 559001 559076 . + . ID=gene-VA249_RS02575;Name=VA249_RS02575;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS02575;old_locus_tag=VYA_t00130 NZ_AP024165.1 tRNAscan-SE tRNA 559001 559076 . + . ID=rna-VA249_RS02575;Parent=gene-VA249_RS02575;anticodon=(pos:559035..559037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02575;product=tRNA-Glu NZ_AP024165.1 tRNAscan-SE exon 559001 559076 . + . ID=exon-VA249_RS02575-1;Parent=rna-VA249_RS02575;anticodon=(pos:559035..559037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02575;product=tRNA-Glu NZ_AP024165.1 RefSeq gene 559404 562296 . + . ID=gene-VA249_RS02580;Name=VA249_RS02580;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS02580;old_locus_tag=VYA_r00050 NZ_AP024165.1 cmsearch rRNA 559404 562296 . + . ID=rna-VA249_RS02580;Parent=gene-VA249_RS02580;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02580;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 559404 562296 . + . ID=exon-VA249_RS02580-1;Parent=rna-VA249_RS02580;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02580;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 562388 562504 . + . ID=gene-VA249_RS02585;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS02585;old_locus_tag=VYA_r00060 NZ_AP024165.1 cmsearch rRNA 562388 562504 . + . ID=rna-VA249_RS02585;Parent=gene-VA249_RS02585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02585;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 562388 562504 . + . ID=exon-VA249_RS02585-1;Parent=rna-VA249_RS02585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02585;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 562570 562646 . + . ID=gene-VA249_RS02590;Name=VA249_RS02590;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS02590;old_locus_tag=VYA_t00140 NZ_AP024165.1 tRNAscan-SE tRNA 562570 562646 . + . ID=rna-VA249_RS02590;Parent=gene-VA249_RS02590;anticodon=(pos:562604..562606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02590;product=tRNA-Asp NZ_AP024165.1 tRNAscan-SE exon 562570 562646 . + . ID=exon-VA249_RS02590-1;Parent=rna-VA249_RS02590;anticodon=(pos:562604..562606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02590;product=tRNA-Asp NZ_AP024165.1 RefSeq gene 562682 562758 . + . ID=gene-VA249_RS02595;Name=VA249_RS02595;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS02595;old_locus_tag=VYA_t00150 NZ_AP024165.1 tRNAscan-SE tRNA 562682 562758 . + . ID=rna-VA249_RS02595;Parent=gene-VA249_RS02595;anticodon=(pos:562716..562718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02595;product=tRNA-Trp NZ_AP024165.1 tRNAscan-SE exon 562682 562758 . + . ID=exon-VA249_RS02595-1;Parent=rna-VA249_RS02595;anticodon=(pos:562716..562718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02595;product=tRNA-Trp NZ_AP024165.1 RefSeq gene 562846 563881 . - . ID=gene-VA249_RS02600;Name=VA249_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02600 NZ_AP024165.1 Protein Homology CDS 563423 563881 . - 0 ID=cds-WP_221068743.1;Parent=gene-VA249_RS02600;Dbxref=Genbank:WP_221068743.1;Name=WP_221068743.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611686.1;locus_tag=VA249_RS02600;product=IS630 family transposase;protein_id=WP_221068743.1;transl_table=11 NZ_AP024165.1 Protein Homology CDS 562846 563421 . - 0 ID=cds-WP_221068743.1;Parent=gene-VA249_RS02600;Dbxref=Genbank:WP_221068743.1;Name=WP_221068743.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611686.1;locus_tag=VA249_RS02600;product=IS630 family transposase;protein_id=WP_221068743.1;transl_table=11 NZ_AP024165.1 RefSeq gene 564035 565507 . + . ID=gene-VA249_RS24010;Name=VA249_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24010;old_locus_tag=VYA_05030 NZ_AP024165.1 Protein Homology CDS 564035 565507 . + 0 ID=cds-WP_225927095.1;Parent=gene-VA249_RS24010;Dbxref=Genbank:WP_225927095.1;Name=WP_225927095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015154.2;locus_tag=VA249_RS24010;product=DNA polymerase;protein_id=WP_225927095.1;transl_table=11 NZ_AP024165.1 RefSeq gene 565504 566553 . + . ID=gene-VA249_RS24015;Name=VA249_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24015;old_locus_tag=VYA_05040 NZ_AP024165.1 GeneMarkS-2+ CDS 565504 566553 . + 0 ID=cds-WP_225927096.1;Parent=gene-VA249_RS24015;Dbxref=Genbank:WP_225927096.1;Name=WP_225927096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS24015;product=hypothetical protein;protein_id=WP_225927096.1;transl_table=11 NZ_AP024165.1 RefSeq gene 567065 567316 . + . ID=gene-VA249_RS02610;Name=VA249_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02610;old_locus_tag=VYA_05050 NZ_AP024165.1 GeneMarkS-2+ CDS 567065 567316 . + 0 ID=cds-WP_221068745.1;Parent=gene-VA249_RS02610;Dbxref=Genbank:WP_221068745.1;Name=WP_221068745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS02610;product=hypothetical protein;protein_id=WP_221068745.1;transl_table=11 NZ_AP024165.1 RefSeq gene 567334 567993 . + . ID=gene-VA249_RS02615;Name=VA249_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02615;old_locus_tag=VYA_05060 NZ_AP024165.1 GeneMarkS-2+ CDS 567334 567993 . + 0 ID=cds-WP_221068747.1;Parent=gene-VA249_RS02615;Dbxref=Genbank:WP_221068747.1;Name=WP_221068747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS02615;product=hypothetical protein;protein_id=WP_221068747.1;transl_table=11 NZ_AP024165.1 RefSeq gene 568007 568696 . + . ID=gene-VA249_RS02620;Name=VA249_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02620;old_locus_tag=VYA_05070 NZ_AP024165.1 GeneMarkS-2+ CDS 568007 568696 . + 0 ID=cds-WP_221068749.1;Parent=gene-VA249_RS02620;Dbxref=Genbank:WP_221068749.1;Name=WP_221068749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS02620;product=hypothetical protein;protein_id=WP_221068749.1;transl_table=11 NZ_AP024165.1 RefSeq gene 568693 569811 . + . ID=gene-VA249_RS02625;Name=VA249_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02625;old_locus_tag=VYA_05080 NZ_AP024165.1 GeneMarkS-2+ CDS 568693 569811 . + 0 ID=cds-WP_221068751.1;Parent=gene-VA249_RS02625;Dbxref=Genbank:WP_221068751.1;Name=WP_221068751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS02625;product=hypothetical protein;protein_id=WP_221068751.1;transl_table=11 NZ_AP024165.1 RefSeq gene 570136 570224 . + . ID=gene-VA249_RS02630;Name=VA249_RS02630;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS02630 NZ_AP024165.1 tRNAscan-SE tRNA 570136 570224 . + . ID=rna-VA249_RS02630;Parent=gene-VA249_RS02630;anticodon=(pos:570204..570206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02630;product=tRNA-Ser NZ_AP024165.1 tRNAscan-SE exon 570136 570224 . + . ID=exon-VA249_RS02630-1;Parent=rna-VA249_RS02630;anticodon=(pos:570204..570206);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02630;product=tRNA-Ser NZ_AP024165.1 RefSeq gene 570332 571768 . + . ID=gene-VA249_RS02635;Name=VA249_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02635;old_locus_tag=VYA_05090 NZ_AP024165.1 Protein Homology CDS 570332 571768 . + 0 ID=cds-WP_221067583.1-2;Parent=gene-VA249_RS02635;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS02635;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 572009 572341 . + . ID=gene-VA249_RS02640;Name=VA249_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02640;old_locus_tag=VYA_05100 NZ_AP024165.1 Protein Homology CDS 572009 572341 . + 0 ID=cds-WP_221068760.1;Parent=gene-VA249_RS02640;Dbxref=Genbank:WP_221068760.1;Name=WP_221068760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633933.1;locus_tag=VA249_RS02640;product=DUF1904 family protein;protein_id=WP_221068760.1;transl_table=11 NZ_AP024165.1 RefSeq gene 572354 573193 . + . ID=gene-VA249_RS02645;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=VA249_RS02645;old_locus_tag=VYA_05110 NZ_AP024165.1 Protein Homology CDS 572354 573193 . + 0 ID=cds-WP_221068761.1;Parent=gene-VA249_RS02645;Dbxref=Genbank:WP_221068761.1;Name=WP_221068761.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194967.1;locus_tag=VA249_RS02645;product=penicillin-insensitive murein endopeptidase;protein_id=WP_221068761.1;transl_table=11 NZ_AP024165.1 RefSeq gene 573482 573790 . + . ID=gene-VA249_RS02650;Name=VA249_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02650;old_locus_tag=VYA_05120 NZ_AP024165.1 Protein Homology CDS 573482 573790 . + 0 ID=cds-WP_128811580.1;Parent=gene-VA249_RS02650;Dbxref=Genbank:WP_128811580.1;Name=WP_128811580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391608.1;locus_tag=VA249_RS02650;product=hypothetical protein;protein_id=WP_128811580.1;transl_table=11 NZ_AP024165.1 RefSeq gene 573831 574085 . - . ID=gene-VA249_RS02655;Name=VA249_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02655;old_locus_tag=VYA_05130 NZ_AP024165.1 Protein Homology CDS 573831 574085 . - 0 ID=cds-WP_221068763.1;Parent=gene-VA249_RS02655;Dbxref=Genbank:WP_221068763.1;Name=WP_221068763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205669.1;locus_tag=VA249_RS02655;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_221068763.1;transl_table=11 NZ_AP024165.1 RefSeq gene 574088 575488 . - . ID=gene-VA249_RS02660;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=VA249_RS02660;old_locus_tag=VYA_05140 NZ_AP024165.1 Protein Homology CDS 574088 575488 . - 0 ID=cds-WP_221068765.1;Parent=gene-VA249_RS02660;Dbxref=Genbank:WP_221068765.1;Name=WP_221068765.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010648426.1;locus_tag=VA249_RS02660;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_221068765.1;transl_table=11 NZ_AP024165.1 RefSeq gene 575653 576567 . - . ID=gene-VA249_RS02665;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=VA249_RS02665;old_locus_tag=VYA_05150 NZ_AP024165.1 Protein Homology CDS 575653 576567 . - 0 ID=cds-WP_221068767.1;Parent=gene-VA249_RS02665;Dbxref=Genbank:WP_221068767.1;Name=WP_221068767.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078567.1;locus_tag=VA249_RS02665;product=recombination-associated protein RdgC;protein_id=WP_221068767.1;transl_table=11 NZ_AP024165.1 RefSeq gene 576791 577480 . + . ID=gene-VA249_RS02670;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=VA249_RS02670;old_locus_tag=VYA_05160 NZ_AP024165.1 Protein Homology CDS 576791 577480 . + 0 ID=cds-WP_128811575.1;Parent=gene-VA249_RS02670;Dbxref=Genbank:WP_128811575.1;Name=WP_128811575.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091118.1;locus_tag=VA249_RS02670;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_128811575.1;transl_table=11 NZ_AP024165.1 RefSeq gene 577521 578822 . + . ID=gene-VA249_RS02675;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=VA249_RS02675;old_locus_tag=VYA_05170 NZ_AP024165.1 Protein Homology CDS 577521 578822 . + 0 ID=cds-WP_221068769.1;Parent=gene-VA249_RS02675;Dbxref=Genbank:WP_221068769.1;Name=WP_221068769.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016021;gbkey=CDS;gene=phoR;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205666.1;locus_tag=VA249_RS02675;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_221068769.1;transl_table=11 NZ_AP024165.1 RefSeq gene 578819 579787 . + . ID=gene-VA249_RS02680;Name=VA249_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02680;old_locus_tag=VYA_05180 NZ_AP024165.1 Protein Homology CDS 578819 579787 . + 0 ID=cds-WP_221068771.1;Parent=gene-VA249_RS02680;Dbxref=Genbank:WP_221068771.1;Name=WP_221068771.1;Ontology_term=GO:0042301;gbkey=CDS;go_function=phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534108.1;locus_tag=VA249_RS02680;product=phosphate ABC transporter substrate-binding protein PstS family protein;protein_id=WP_221068771.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 579803 581307 . - . ID=gene-VA249_RS02685;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=pseudogene;locus_tag=VA249_RS02685;old_locus_tag=VYA_05200;pseudo=true NZ_AP024165.1 Protein Homology CDS 579803 581307 . - 0 ID=cds-VA249_RS02685;Parent=gene-VA249_RS02685;Note=frameshifted;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705556.1;locus_tag=VA249_RS02685;product=exopolyphosphatase;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 581291 583381 . - . ID=gene-VA249_RS02690;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=VA249_RS02690;old_locus_tag=VYA_05210 NZ_AP024165.1 Protein Homology CDS 581291 583381 . - 0 ID=cds-WP_221068773.1;Parent=gene-VA249_RS02690;Dbxref=Genbank:WP_221068773.1;Name=WP_221068773.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445285.1;locus_tag=VA249_RS02690;product=polyphosphate kinase 1;protein_id=WP_221068773.1;transl_table=11 NZ_AP024165.1 RefSeq gene 583589 585793 . + . ID=gene-VA249_RS02695;Name=VA249_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02695;old_locus_tag=VYA_05220 NZ_AP024165.1 Protein Homology CDS 583589 585793 . + 0 ID=cds-WP_221068775.1;Parent=gene-VA249_RS02695;Dbxref=Genbank:WP_221068775.1;Name=WP_221068775.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818879.1;locus_tag=VA249_RS02695;product=ABC transporter permease subunit;protein_id=WP_221068775.1;transl_table=11 NZ_AP024165.1 RefSeq gene 585821 587494 . + . ID=gene-VA249_RS02700;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=VA249_RS02700;old_locus_tag=VYA_05230 NZ_AP024165.1 Protein Homology CDS 585821 587494 . + 0 ID=cds-WP_221068777.1;Parent=gene-VA249_RS02700;Dbxref=Genbank:WP_221068777.1;Name=WP_221068777.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633926.1;locus_tag=VA249_RS02700;product=phosphate ABC transporter permease PstA;protein_id=WP_221068777.1;transl_table=11 NZ_AP024165.1 RefSeq gene 587497 588315 . + . ID=gene-VA249_RS02705;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=VA249_RS02705;old_locus_tag=VYA_05240 NZ_AP024165.1 Protein Homology CDS 587497 588315 . + 0 ID=cds-WP_211919937.1;Parent=gene-VA249_RS02705;Dbxref=Genbank:WP_211919937.1;Name=WP_211919937.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019274140.1;locus_tag=VA249_RS02705;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_211919937.1;transl_table=11 NZ_AP024165.1 RefSeq gene 588341 589039 . + . ID=gene-VA249_RS02710;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=VA249_RS02710;old_locus_tag=VYA_05250 NZ_AP024165.1 Protein Homology CDS 588341 589039 . + 0 ID=cds-WP_128811569.1;Parent=gene-VA249_RS02710;Dbxref=Genbank:WP_128811569.1;Name=WP_128811569.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017419966.1;locus_tag=VA249_RS02710;product=phosphate signaling complex protein PhoU;protein_id=WP_128811569.1;transl_table=11 NZ_AP024165.1 RefSeq gene 589176 589814 . - . ID=gene-VA249_RS02715;Name=VA249_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02715;old_locus_tag=VYA_05260 NZ_AP024165.1 Protein Homology CDS 589176 589814 . - 0 ID=cds-WP_221068779.1;Parent=gene-VA249_RS02715;Dbxref=Genbank:WP_221068779.1;Name=WP_221068779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440345.1;locus_tag=VA249_RS02715;product=YadA-like family protein;protein_id=WP_221068779.1;transl_table=11 NZ_AP024165.1 RefSeq gene 589954 590883 . - . ID=gene-VA249_RS02720;Name=VA249_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02720;old_locus_tag=VYA_05270 NZ_AP024165.1 Protein Homology CDS 589954 590883 . - 0 ID=cds-WP_221068780.1;Parent=gene-VA249_RS02720;Dbxref=Genbank:WP_221068780.1;Name=WP_221068780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016797169.1;locus_tag=VA249_RS02720;product=LysR family transcriptional regulator;protein_id=WP_221068780.1;transl_table=11 NZ_AP024165.1 RefSeq gene 590893 591669 . - . ID=gene-VA249_RS02725;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=VA249_RS02725;old_locus_tag=VYA_05280 NZ_AP024165.1 Protein Homology CDS 590893 591669 . - 0 ID=cds-WP_221068782.1;Parent=gene-VA249_RS02725;Dbxref=Genbank:WP_221068782.1;Name=WP_221068782.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534115.1;locus_tag=VA249_RS02725;product=polyphosphate kinase 2;protein_id=WP_221068782.1;transl_table=11 NZ_AP024165.1 RefSeq gene 591738 592481 . - . ID=gene-VA249_RS02730;Name=VA249_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02730;old_locus_tag=VYA_05290 NZ_AP024165.1 Protein Homology CDS 591738 592481 . - 0 ID=cds-WP_221068784.1;Parent=gene-VA249_RS02730;Dbxref=Genbank:WP_221068784.1;Name=WP_221068784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448854.1;locus_tag=VA249_RS02730;product=copper homeostasis protein CutC;protein_id=WP_221068784.1;transl_table=11 NZ_AP024165.1 RefSeq gene 592756 593364 . - . ID=gene-VA249_RS02735;Name=VA249_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02735;old_locus_tag=VYA_05300 NZ_AP024165.1 Protein Homology CDS 592756 593364 . - 0 ID=cds-WP_128811563.1;Parent=gene-VA249_RS02735;Dbxref=Genbank:WP_128811563.1;Name=WP_128811563.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012533760.1;locus_tag=VA249_RS02735;product=peroxiredoxin C;protein_id=WP_128811563.1;transl_table=11 NZ_AP024165.1 RefSeq gene 593564 594469 . + . ID=gene-VA249_RS02740;Name=VA249_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02740;old_locus_tag=VYA_05310 NZ_AP024165.1 Protein Homology CDS 593564 594469 . + 0 ID=cds-WP_221068785.1;Parent=gene-VA249_RS02740;Dbxref=Genbank:WP_221068785.1;Name=WP_221068785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017101069.1;locus_tag=VA249_RS02740;product=hydrogen peroxide-inducible genes activator;protein_id=WP_221068785.1;transl_table=11 NZ_AP024165.1 RefSeq gene 595076 596704 . + . ID=gene-VA249_RS02745;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=VA249_RS02745;old_locus_tag=VYA_05320 NZ_AP024165.1 Protein Homology CDS 595076 596704 . + 0 ID=cds-WP_221068788.1;Parent=gene-VA249_RS02745;Dbxref=Genbank:WP_221068788.1;Name=WP_221068788.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534119.1;locus_tag=VA249_RS02745;product=malate synthase A;protein_id=WP_221068788.1;transl_table=11 NZ_AP024165.1 RefSeq gene 596852 598165 . + . ID=gene-VA249_RS02750;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=VA249_RS02750;old_locus_tag=VYA_05330 NZ_AP024165.1 Protein Homology CDS 596852 598165 . + 0 ID=cds-WP_211919929.1;Parent=gene-VA249_RS02750;Dbxref=Genbank:WP_211919929.1;Name=WP_211919929.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004747909.1;locus_tag=VA249_RS02750;product=isocitrate lyase;protein_id=WP_211919929.1;transl_table=11 NZ_AP024165.1 RefSeq gene 598351 598800 . - . ID=gene-VA249_RS02755;Name=VA249_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02755;old_locus_tag=VYA_05340 NZ_AP024165.1 Protein Homology CDS 598351 598800 . - 0 ID=cds-WP_221068790.1;Parent=gene-VA249_RS02755;Dbxref=Genbank:WP_221068790.1;Name=WP_221068790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391583.1;locus_tag=VA249_RS02755;product=CBS domain-containing protein;protein_id=WP_221068790.1;transl_table=11 NZ_AP024165.1 RefSeq gene 599056 599277 . - . ID=gene-VA249_RS02760;Name=VA249_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02760;old_locus_tag=VYA_05350 NZ_AP024165.1 Protein Homology CDS 599056 599277 . - 0 ID=cds-WP_221068792.1;Parent=gene-VA249_RS02760;Dbxref=Genbank:WP_221068792.1;Name=WP_221068792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194980.1;locus_tag=VA249_RS02760;product=hypothetical protein;protein_id=WP_221068792.1;transl_table=11 NZ_AP024165.1 RefSeq gene 599568 600620 . + . ID=gene-VA249_RS02765;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=VA249_RS02765;old_locus_tag=VYA_05360 NZ_AP024165.1 Protein Homology CDS 599568 600620 . + 0 ID=cds-WP_211919926.1;Parent=gene-VA249_RS02765;Dbxref=Genbank:WP_211919926.1;Name=WP_211919926.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019274129.1;locus_tag=VA249_RS02765;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_211919926.1;transl_table=11 NZ_AP024165.1 RefSeq gene 600863 601996 . + . ID=gene-VA249_RS02770;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=VA249_RS02770;old_locus_tag=VYA_05370 NZ_AP024165.1 Protein Homology CDS 600863 601996 . + 0 ID=cds-WP_128811556.1;Parent=gene-VA249_RS02770;Dbxref=Genbank:WP_128811556.1;Name=WP_128811556.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230923.1;locus_tag=VA249_RS02770;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_128811556.1;transl_table=11 NZ_AP024165.1 RefSeq gene 602162 602491 . + . ID=gene-VA249_RS02775;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=VA249_RS02775;old_locus_tag=VYA_05380 NZ_AP024165.1 Protein Homology CDS 602162 602491 . + 0 ID=cds-WP_098416397.1;Parent=gene-VA249_RS02775;Dbxref=Genbank:WP_098416397.1;Name=WP_098416397.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019822095.1;locus_tag=VA249_RS02775;product=preprotein translocase subunit YajC;protein_id=WP_098416397.1;transl_table=11 NZ_AP024165.1 RefSeq gene 602513 604369 . + . ID=gene-VA249_RS02780;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=VA249_RS02780;old_locus_tag=VYA_05390 NZ_AP024165.1 Protein Homology CDS 602513 604369 . + 0 ID=cds-WP_128811554.1;Parent=gene-VA249_RS02780;Dbxref=Genbank:WP_128811554.1;Name=WP_128811554.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004747919.1;locus_tag=VA249_RS02780;product=protein translocase subunit SecD;protein_id=WP_128811554.1;transl_table=11 NZ_AP024165.1 RefSeq gene 604384 605331 . + . ID=gene-VA249_RS02785;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=VA249_RS02785;old_locus_tag=VYA_05400 NZ_AP024165.1 Protein Homology CDS 604384 605331 . + 0 ID=cds-WP_221068794.1;Parent=gene-VA249_RS02785;Dbxref=Genbank:WP_221068794.1;Name=WP_221068794.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230925.1;locus_tag=VA249_RS02785;product=protein translocase subunit SecF;protein_id=WP_221068794.1;transl_table=11 NZ_AP024165.1 RefSeq gene 605557 606360 . - . ID=gene-VA249_RS02790;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=VA249_RS02790;old_locus_tag=VYA_05410 NZ_AP024165.1 Protein Homology CDS 605557 606360 . - 0 ID=cds-WP_211919923.1;Parent=gene-VA249_RS02790;Dbxref=Genbank:WP_211919923.1;Name=WP_211919923.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553439.1;locus_tag=VA249_RS02790;product=inositol-1-monophosphatase;protein_id=WP_211919923.1;transl_table=11 NZ_AP024165.1 RefSeq gene 606592 607311 . + . ID=gene-VA249_RS02795;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=VA249_RS02795;old_locus_tag=VYA_05420 NZ_AP024165.1 Protein Homology CDS 606592 607311 . + 0 ID=cds-WP_221068795.1;Parent=gene-VA249_RS02795;Dbxref=Genbank:WP_221068795.1;Name=WP_221068795.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391563.1;locus_tag=VA249_RS02795;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_221068795.1;transl_table=11 NZ_AP024165.1 RefSeq gene 607437 607943 . + . ID=gene-VA249_RS02800;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=VA249_RS02800;old_locus_tag=VYA_05430 NZ_AP024165.1 Protein Homology CDS 607437 607943 . + 0 ID=cds-WP_128811550.1;Parent=gene-VA249_RS02800;Dbxref=Genbank:WP_128811550.1;Name=WP_128811550.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127086.1;locus_tag=VA249_RS02800;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_128811550.1;transl_table=11 NZ_AP024165.1 RefSeq gene 607972 609186 . + . ID=gene-VA249_RS02805;Name=VA249_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02805;old_locus_tag=VYA_05440 NZ_AP024165.1 Protein Homology CDS 607972 609186 . + 0 ID=cds-WP_128811549.1;Parent=gene-VA249_RS02805;Dbxref=Genbank:WP_128811549.1;Name=WP_128811549.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127087.1;locus_tag=VA249_RS02805;product=IscS subfamily cysteine desulfurase;protein_id=WP_128811549.1;transl_table=11 NZ_AP024165.1 RefSeq gene 609225 609608 . + . ID=gene-VA249_RS02810;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=VA249_RS02810;old_locus_tag=VYA_05450 NZ_AP024165.1 Protein Homology CDS 609225 609608 . + 0 ID=cds-WP_005424883.1;Parent=gene-VA249_RS02810;Dbxref=Genbank:WP_005424883.1;Name=WP_005424883.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005424883.1;locus_tag=VA249_RS02810;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_005424883.1;transl_table=11 NZ_AP024165.1 RefSeq gene 609683 610006 . + . ID=gene-VA249_RS02815;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=VA249_RS02815;old_locus_tag=VYA_05460 NZ_AP024165.1 Protein Homology CDS 609683 610006 . + 0 ID=cds-WP_211919920.1;Parent=gene-VA249_RS02815;Dbxref=Genbank:WP_211919920.1;Name=WP_211919920.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscA;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301573.1;locus_tag=VA249_RS02815;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_211919920.1;transl_table=11 NZ_AP024165.1 RefSeq gene 610062 610577 . + . ID=gene-VA249_RS02820;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=VA249_RS02820;old_locus_tag=VYA_05470 NZ_AP024165.1 Protein Homology CDS 610062 610577 . + 0 ID=cds-WP_221068797.1;Parent=gene-VA249_RS02820;Dbxref=Genbank:WP_221068797.1;Name=WP_221068797.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016790474.1;locus_tag=VA249_RS02820;product=co-chaperone HscB;protein_id=WP_221068797.1;transl_table=11 NZ_AP024165.1 RefSeq gene 610599 612452 . + . ID=gene-VA249_RS02825;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=VA249_RS02825;old_locus_tag=VYA_05480 NZ_AP024165.1 Protein Homology CDS 610599 612452 . + 0 ID=cds-WP_221068799.1;Parent=gene-VA249_RS02825;Dbxref=Genbank:WP_221068799.1;Name=WP_221068799.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735097.1;locus_tag=VA249_RS02825;product=Fe-S protein assembly chaperone HscA;protein_id=WP_221068799.1;transl_table=11 NZ_AP024165.1 RefSeq gene 612466 612804 . + . ID=gene-VA249_RS02830;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=VA249_RS02830;old_locus_tag=VYA_05490 NZ_AP024165.1 Protein Homology CDS 612466 612804 . + 0 ID=cds-WP_005460237.1;Parent=gene-VA249_RS02830;Dbxref=Genbank:WP_005460237.1;Name=WP_005460237.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017629863.1;locus_tag=VA249_RS02830;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_005460237.1;transl_table=11 NZ_AP024165.1 RefSeq gene 612845 613039 . + . ID=gene-VA249_RS02835;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=VA249_RS02835;old_locus_tag=VYA_05500 NZ_AP024165.1 Protein Homology CDS 612845 613039 . + 0 ID=cds-WP_221068801.1;Parent=gene-VA249_RS02835;Dbxref=Genbank:WP_221068801.1;Name=WP_221068801.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000872173.1;locus_tag=VA249_RS02835;product=Fe-S cluster assembly protein IscX;protein_id=WP_221068801.1;transl_table=11 NZ_AP024165.1 RefSeq gene 613210 614508 . + . ID=gene-VA249_RS02840;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=VA249_RS02840;old_locus_tag=VYA_05510 NZ_AP024165.1 Protein Homology CDS 613210 614508 . + 0 ID=cds-WP_221068802.1;Parent=gene-VA249_RS02840;Dbxref=Genbank:WP_221068802.1;Name=WP_221068802.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127089.1;locus_tag=VA249_RS02840;product=aminopeptidase PepB;protein_id=WP_221068802.1;transl_table=11 NZ_AP024165.1 RefSeq gene 614611 615036 . + . ID=gene-VA249_RS02845;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=VA249_RS02845;old_locus_tag=VYA_05520 NZ_AP024165.1 Protein Homology CDS 614611 615036 . + 0 ID=cds-WP_128811543.1;Parent=gene-VA249_RS02845;Dbxref=Genbank:WP_128811543.1;Name=WP_128811543.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532589.1;locus_tag=VA249_RS02845;product=nucleoside-diphosphate kinase;protein_id=WP_128811543.1;transl_table=11 NZ_AP024165.1 RefSeq gene 615252 616379 . + . ID=gene-VA249_RS02850;Name=VA249_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02850;old_locus_tag=VYA_05530 NZ_AP024165.1 Protein Homology CDS 615252 616379 . + 0 ID=cds-WP_128811542.1;Parent=gene-VA249_RS02850;Dbxref=Genbank:WP_128811542.1;Name=WP_128811542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011149605.1;locus_tag=VA249_RS02850;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_128811542.1;transl_table=11 NZ_AP024165.1 RefSeq gene 616785 617750 . + . ID=gene-VA249_RS02855;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=VA249_RS02855;old_locus_tag=VYA_05540 NZ_AP024165.1 Protein Homology CDS 616785 617750 . + 0 ID=cds-WP_221068803.1;Parent=gene-VA249_RS02855;Dbxref=Genbank:WP_221068803.1;Name=WP_221068803.1;Ontology_term=GO:0008360,GO:0003677,GO:0016021;gbkey=CDS;gene=rodZ;go_component=integral component of membrane|0016021||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127090.1;locus_tag=VA249_RS02855;product=cytoskeleton protein RodZ;protein_id=WP_221068803.1;transl_table=11 NZ_AP024165.1 RefSeq gene 617757 618875 . + . ID=gene-VA249_RS02860;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=VA249_RS02860;old_locus_tag=VYA_05550 NZ_AP024165.1 Protein Homology CDS 617757 618875 . + 0 ID=cds-WP_221068812.1;Parent=gene-VA249_RS02860;Dbxref=Genbank:WP_221068812.1;Name=WP_221068812.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843137.1;locus_tag=VA249_RS02860;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_221068812.1;transl_table=11 NZ_AP024165.1 RefSeq gene 618902 620170 . + . ID=gene-VA249_RS02865;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=VA249_RS02865;old_locus_tag=VYA_05560 NZ_AP024165.1 Protein Homology CDS 618902 620170 . + 0 ID=cds-WP_221068815.1;Parent=gene-VA249_RS02865;Dbxref=Genbank:WP_221068815.1;Name=WP_221068815.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078525.1;locus_tag=VA249_RS02865;product=histidine--tRNA ligase;protein_id=WP_221068815.1;transl_table=11 NZ_AP024165.1 RefSeq gene 620297 620911 . + . ID=gene-VA249_RS02870;Name=VA249_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02870;old_locus_tag=VYA_05570 NZ_AP024165.1 Protein Homology CDS 620297 620911 . + 0 ID=cds-WP_128811538.1;Parent=gene-VA249_RS02870;Dbxref=Genbank:WP_128811538.1;Name=WP_128811538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527531.1;locus_tag=VA249_RS02870;product=YfgM family protein;protein_id=WP_128811538.1;transl_table=11 NZ_AP024165.1 RefSeq gene 620924 622084 . + . ID=gene-VA249_RS02875;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=VA249_RS02875;old_locus_tag=VYA_05580 NZ_AP024165.1 Protein Homology CDS 620924 622084 . + 0 ID=cds-WP_221068817.1;Parent=gene-VA249_RS02875;Dbxref=Genbank:WP_221068817.1;Name=WP_221068817.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848297.1;locus_tag=VA249_RS02875;product=outer membrane protein assembly factor BamB;protein_id=WP_221068817.1;transl_table=11 NZ_AP024165.1 RefSeq gene 622254 623750 . + . ID=gene-VA249_RS02880;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=VA249_RS02880;old_locus_tag=VYA_05590 NZ_AP024165.1 Protein Homology CDS 622254 623750 . + 0 ID=cds-WP_128811536.1;Parent=gene-VA249_RS02880;Dbxref=Genbank:WP_128811536.1;Name=WP_128811536.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230944.1;locus_tag=VA249_RS02880;product=ribosome biogenesis GTPase Der;protein_id=WP_128811536.1;transl_table=11 NZ_AP024165.1 RefSeq gene 623814 624689 . + . ID=gene-VA249_RS02885;Name=VA249_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02885;old_locus_tag=VYA_05600 NZ_AP024165.1 Protein Homology CDS 623814 624689 . + 0 ID=cds-WP_221068820.1;Parent=gene-VA249_RS02885;Dbxref=Genbank:WP_221068820.1;Name=WP_221068820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005383714.1;locus_tag=VA249_RS02885;product=alanyl-tRNA editing protein;protein_id=WP_221068820.1;transl_table=11 NZ_AP024165.1 RefSeq gene 625072 625305 . + . ID=gene-VA249_RS02890;Name=VA249_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02890;old_locus_tag=VYA_05610 NZ_AP024165.1 Protein Homology CDS 625072 625305 . + 0 ID=cds-WP_211919914.1;Parent=gene-VA249_RS02890;Dbxref=Genbank:WP_211919914.1;Name=WP_211919914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446190.1;locus_tag=VA249_RS02890;product=zinc-ribbon domain-containing protein;protein_id=WP_211919914.1;transl_table=11 NZ_AP024165.1 RefSeq gene 625369 626700 . - . ID=gene-VA249_RS02895;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=VA249_RS02895;old_locus_tag=VYA_05620 NZ_AP024165.1 Protein Homology CDS 625369 626700 . - 0 ID=cds-WP_128811533.1;Parent=gene-VA249_RS02895;Dbxref=Genbank:WP_128811533.1;Name=WP_128811533.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843146.1;locus_tag=VA249_RS02895;product=exodeoxyribonuclease VII large subunit;protein_id=WP_128811533.1;transl_table=11 NZ_AP024165.1 RefSeq gene 626933 628396 . + . ID=gene-VA249_RS02900;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=VA249_RS02900;old_locus_tag=VYA_05630 NZ_AP024165.1 Protein Homology CDS 626933 628396 . + 0 ID=cds-WP_128811532.1;Parent=gene-VA249_RS02900;Dbxref=Genbank:WP_128811532.1;Name=WP_128811532.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004413113.1;locus_tag=VA249_RS02900;product=IMP dehydrogenase;protein_id=WP_128811532.1;transl_table=11 NZ_AP024165.1 RefSeq gene 628547 630100 . + . ID=gene-VA249_RS02905;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=VA249_RS02905;old_locus_tag=VYA_05640 NZ_AP024165.1 Protein Homology CDS 628547 630100 . + 0 ID=cds-WP_221068822.1;Parent=gene-VA249_RS02905;Dbxref=Genbank:WP_221068822.1;Name=WP_221068822.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017056215.1;locus_tag=VA249_RS02905;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_221068822.1;transl_table=11 NZ_AP024165.1 RefSeq gene 630630 631223 . + . ID=gene-VA249_RS02910;Name=VA249_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02910;old_locus_tag=VYA_05650 NZ_AP024165.1 Protein Homology CDS 630630 631223 . + 0 ID=cds-WP_128811530.1;Parent=gene-VA249_RS02910;Dbxref=Genbank:WP_128811530.1;Name=WP_128811530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017419993.1;locus_tag=VA249_RS02910;product=GPR1/FUN34/YaaH family transporter;protein_id=WP_128811530.1;transl_table=11 NZ_AP024165.1 RefSeq gene 631353 632900 . - . ID=gene-VA249_RS02915;Name=VA249_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02915;old_locus_tag=VYA_05660 NZ_AP024165.1 Protein Homology CDS 631353 632900 . - 0 ID=cds-WP_221068824.1;Parent=gene-VA249_RS02915;Dbxref=Genbank:WP_221068824.1;Name=WP_221068824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446203.1;locus_tag=VA249_RS02915;product=sodium:alanine symporter family protein;protein_id=WP_221068824.1;transl_table=11 NZ_AP024165.1 RefSeq gene 633296 634552 . - . ID=gene-VA249_RS02920;Name=VA249_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02920;old_locus_tag=VYA_05670 NZ_AP024165.1 Protein Homology CDS 633296 634552 . - 0 ID=cds-WP_221068826.1;Parent=gene-VA249_RS02920;Dbxref=Genbank:WP_221068826.1;Name=WP_221068826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188496.1;locus_tag=VA249_RS02920;product=D-amino acid dehydrogenase;protein_id=WP_221068826.1;transl_table=11 NZ_AP024165.1 RefSeq gene 634659 635555 . + . ID=gene-VA249_RS02925;Name=VA249_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02925;old_locus_tag=VYA_05680 NZ_AP024165.1 Protein Homology CDS 634659 635555 . + 0 ID=cds-WP_221068828.1;Parent=gene-VA249_RS02925;Dbxref=Genbank:WP_221068828.1;Name=WP_221068828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194995.1;locus_tag=VA249_RS02925;product=LysR substrate-binding domain-containing protein;protein_id=WP_221068828.1;transl_table=11 NZ_AP024165.1 RefSeq gene 635663 636931 . + . ID=gene-VA249_RS02930;Name=VA249_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02930;old_locus_tag=VYA_05690 NZ_AP024165.1 Protein Homology CDS 635663 636931 . + 0 ID=cds-WP_221068831.1;Parent=gene-VA249_RS02930;Dbxref=Genbank:WP_221068831.1;Name=WP_221068831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019829320.1;locus_tag=VA249_RS02930;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=WP_221068831.1;transl_table=11 NZ_AP024165.1 RefSeq gene 637160 638488 . + . ID=gene-VA249_RS02935;Name=VA249_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02935;old_locus_tag=VYA_05700 NZ_AP024165.1 Protein Homology CDS 637160 638488 . + 0 ID=cds-WP_221068833.1;Parent=gene-VA249_RS02935;Dbxref=Genbank:WP_221068833.1;Name=WP_221068833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010648339.1;locus_tag=VA249_RS02935;product=aspartate aminotransferase family protein;protein_id=WP_221068833.1;transl_table=11 NZ_AP024165.1 RefSeq gene 638482 639384 . + . ID=gene-VA249_RS02940;Name=VA249_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02940;old_locus_tag=VYA_05710 NZ_AP024165.1 Protein Homology CDS 638482 639384 . + 0 ID=cds-WP_221068834.1;Parent=gene-VA249_RS02940;Dbxref=Genbank:WP_221068834.1;Name=WP_221068834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447667.1;locus_tag=VA249_RS02940;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_221068834.1;transl_table=11 NZ_AP024165.1 RefSeq gene 639424 640791 . - . ID=gene-VA249_RS02945;Name=VA249_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02945;old_locus_tag=VYA_05720 NZ_AP024165.1 Protein Homology CDS 639424 640791 . - 0 ID=cds-WP_221068836.1;Parent=gene-VA249_RS02945;Dbxref=Genbank:WP_221068836.1;Name=WP_221068836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446222.1;locus_tag=VA249_RS02945;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_221068836.1;transl_table=11 NZ_AP024165.1 RefSeq gene 640971 641546 . - . ID=gene-VA249_RS02950;Name=VA249_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02950;old_locus_tag=VYA_05730 NZ_AP024165.1 Protein Homology CDS 640971 641546 . - 0 ID=cds-WP_221069786.1;Parent=gene-VA249_RS02950;Dbxref=Genbank:WP_221069786.1;Name=WP_221069786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818904.1;locus_tag=VA249_RS02950;product=DedA family protein;protein_id=WP_221069786.1;transl_table=11 NZ_AP024165.1 RefSeq gene 641800 641884 . + . ID=gene-VA249_RS02955;Name=VA249_RS02955;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS02955;old_locus_tag=VYA_t00160 NZ_AP024165.1 tRNAscan-SE tRNA 641800 641884 . + . ID=rna-VA249_RS02955;Parent=gene-VA249_RS02955;anticodon=(pos:641834..641836);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02955;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 641800 641884 . + . ID=exon-VA249_RS02955-1;Parent=rna-VA249_RS02955;anticodon=(pos:641834..641836);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS02955;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 642053 644521 . + . ID=gene-VA249_RS02960;Name=VA249_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02960;old_locus_tag=VYA_05740 NZ_AP024165.1 Protein Homology CDS 642053 644521 . + 0 ID=cds-WP_221068838.1;Parent=gene-VA249_RS02960;Dbxref=Genbank:WP_221068838.1;Name=WP_221068838.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008219522.1;locus_tag=VA249_RS02960;product=DNA cytosine methyltransferase;protein_id=WP_221068838.1;transl_table=11 NZ_AP024165.1 RefSeq gene 644605 645189 . - . ID=gene-VA249_RS02965;Name=VA249_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02965;old_locus_tag=VYA_05750 NZ_AP024165.1 GeneMarkS-2+ CDS 644605 645189 . - 0 ID=cds-WP_221068839.1;Parent=gene-VA249_RS02965;Dbxref=Genbank:WP_221068839.1;Name=WP_221068839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS02965;product=hypothetical protein;protein_id=WP_221068839.1;transl_table=11 NZ_AP024165.1 RefSeq gene 645324 646511 . - . ID=gene-VA249_RS02970;Name=VA249_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02970;old_locus_tag=VYA_05760 NZ_AP024165.1 Protein Homology CDS 645324 646511 . - 0 ID=cds-WP_225927097.1;Parent=gene-VA249_RS02970;Dbxref=Genbank:WP_225927097.1;Name=WP_225927097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017021094.1;locus_tag=VA249_RS02970;product=hypothetical protein;protein_id=WP_225927097.1;transl_table=11 NZ_AP024165.1 RefSeq gene 646941 647420 . + . ID=gene-VA249_RS02975;Name=VA249_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02975;old_locus_tag=VYA_05770 NZ_AP024165.1 Protein Homology CDS 646941 647420 . + 0 ID=cds-WP_071235108.1;Parent=gene-VA249_RS02975;Dbxref=Genbank:WP_071235108.1;Name=WP_071235108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848621.1;locus_tag=VA249_RS02975;product=DUF1456 family protein;protein_id=WP_071235108.1;transl_table=11 NZ_AP024165.1 RefSeq gene 648006 648722 . + . ID=gene-VA249_RS02980;Name=VA249_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02980;old_locus_tag=VYA_05780 NZ_AP024165.1 Protein Homology CDS 648006 648722 . + 0 ID=cds-WP_225927098.1;Parent=gene-VA249_RS02980;Dbxref=Genbank:WP_225927098.1;Name=WP_225927098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229572.1;locus_tag=VA249_RS02980;product=class I SAM-dependent methyltransferase;protein_id=WP_225927098.1;transl_table=11 NZ_AP024165.1 RefSeq gene 649004 649371 . - . ID=gene-VA249_RS02985;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=VA249_RS02985;old_locus_tag=VYA_tm00010 NZ_AP024165.1 cmsearch tmRNA 649004 649371 . - . ID=rna-VA249_RS02985;Parent=gene-VA249_RS02985;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02985;product=transfer-messenger RNA NZ_AP024165.1 cmsearch exon 649004 649371 . - . ID=exon-VA249_RS02985-1;Parent=rna-VA249_RS02985;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS02985;product=transfer-messenger RNA NZ_AP024165.1 RefSeq gene 649440 649925 . - . ID=gene-VA249_RS02990;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=VA249_RS02990;old_locus_tag=VYA_05790 NZ_AP024165.1 Protein Homology CDS 649440 649925 . - 0 ID=cds-WP_005440253.1;Parent=gene-VA249_RS02990;Dbxref=Genbank:WP_005440253.1;Name=WP_005440253.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527465.1;locus_tag=VA249_RS02990;product=SsrA-binding protein SmpB;protein_id=WP_005440253.1;transl_table=11 NZ_AP024165.1 RefSeq gene 650044 650487 . + . ID=gene-VA249_RS02995;Name=VA249_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS02995;old_locus_tag=VYA_05800 NZ_AP024165.1 Protein Homology CDS 650044 650487 . + 0 ID=cds-WP_221068842.1;Parent=gene-VA249_RS02995;Dbxref=Genbank:WP_221068842.1;Name=WP_221068842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006959631.1;locus_tag=VA249_RS02995;product=SRPBCC family protein;protein_id=WP_221068842.1;transl_table=11 NZ_AP024165.1 RefSeq gene 650477 650830 . + . ID=gene-VA249_RS03000;Name=VA249_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03000;old_locus_tag=VYA_05810 NZ_AP024165.1 Protein Homology CDS 650477 650830 . + 0 ID=cds-WP_128811503.1;Parent=gene-VA249_RS03000;Dbxref=Genbank:WP_128811503.1;Name=WP_128811503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008081119.1;locus_tag=VA249_RS03000;product=RnfH family protein;protein_id=WP_128811503.1;transl_table=11 NZ_AP024165.1 RefSeq gene 650894 651253 . - . ID=gene-VA249_RS03005;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=VA249_RS03005;old_locus_tag=VYA_05820 NZ_AP024165.1 Protein Homology CDS 650894 651253 . - 0 ID=cds-WP_128811502.1;Parent=gene-VA249_RS03005;Dbxref=Genbank:WP_128811502.1;Name=WP_128811502.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005424693.1;locus_tag=VA249_RS03005;product=outer membrane protein assembly factor BamE;protein_id=WP_128811502.1;transl_table=11 NZ_AP024165.1 RefSeq gene 651524 653188 . - . ID=gene-VA249_RS03010;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=VA249_RS03010;old_locus_tag=VYA_05830 NZ_AP024165.1 Protein Homology CDS 651524 653188 . - 0 ID=cds-WP_221068843.1;Parent=gene-VA249_RS03010;Dbxref=Genbank:WP_221068843.1;Name=WP_221068843.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000879549.1;locus_tag=VA249_RS03010;product=DNA repair protein RecN;protein_id=WP_221068843.1;transl_table=11 NZ_AP024165.1 RefSeq gene 653555 654439 . - . ID=gene-VA249_RS03015;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=VA249_RS03015;old_locus_tag=VYA_05840 NZ_AP024165.1 Protein Homology CDS 653555 654439 . - 0 ID=cds-WP_221068845.1;Parent=gene-VA249_RS03015;Dbxref=Genbank:WP_221068845.1;Name=WP_221068845.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742828.1;locus_tag=VA249_RS03015;product=NAD(+) kinase;protein_id=WP_221068845.1;transl_table=11 NZ_AP024165.1 RefSeq gene 654585 655181 . + . ID=gene-VA249_RS03020;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=VA249_RS03020;old_locus_tag=VYA_05850 NZ_AP024165.1 Protein Homology CDS 654585 655181 . + 0 ID=cds-WP_128811499.1;Parent=gene-VA249_RS03020;Dbxref=Genbank:WP_128811499.1;Name=WP_128811499.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074167.1;locus_tag=VA249_RS03020;product=nucleotide exchange factor GrpE;protein_id=WP_128811499.1;transl_table=11 NZ_AP024165.1 RefSeq gene 655615 656889 . + . ID=gene-VA249_RS03025;Name=VA249_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03025;old_locus_tag=VYA_05860 NZ_AP024165.1 Protein Homology CDS 655615 656889 . + 0 ID=cds-WP_221068847.1;Parent=gene-VA249_RS03025;Dbxref=Genbank:WP_221068847.1;Name=WP_221068847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455939.1;locus_tag=VA249_RS03025;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_221068847.1;transl_table=11 NZ_AP024165.1 RefSeq gene 657126 659039 . + . ID=gene-VA249_RS03030;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=VA249_RS03030;old_locus_tag=VYA_05870 NZ_AP024165.1 Protein Homology CDS 657126 659039 . + 0 ID=cds-WP_221068850.1;Parent=gene-VA249_RS03030;Dbxref=Genbank:WP_221068850.1;Name=WP_221068850.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533728.1;locus_tag=VA249_RS03030;product=molecular chaperone DnaK;protein_id=WP_221068850.1;transl_table=11 NZ_AP024165.1 RefSeq gene 659241 660386 . + . ID=gene-VA249_RS03035;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=VA249_RS03035;old_locus_tag=VYA_05880 NZ_AP024165.1 Protein Homology CDS 659241 660386 . + 0 ID=cds-WP_128811496.1;Parent=gene-VA249_RS03035;Dbxref=Genbank:WP_128811496.1;Name=WP_128811496.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527458.1;locus_tag=VA249_RS03035;product=molecular chaperone DnaJ;protein_id=WP_128811496.1;transl_table=11 NZ_AP024165.1 RefSeq gene 660497 660934 . - . ID=gene-VA249_RS03040;Name=VA249_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03040;old_locus_tag=VYA_05890 NZ_AP024165.1 Protein Homology CDS 660497 660934 . - 0 ID=cds-WP_221068851.1;Parent=gene-VA249_RS03040;Dbxref=Genbank:WP_221068851.1;Name=WP_221068851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697706.1;locus_tag=VA249_RS03040;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_221068851.1;transl_table=11 NZ_AP024165.1 RefSeq gene 661039 661554 . + . ID=gene-VA249_RS03045;Name=VA249_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03045 NZ_AP024165.1 Protein Homology CDS 661039 661554 . + 0 ID=cds-WP_221068854.1;Parent=gene-VA249_RS03045;Dbxref=Genbank:WP_221068854.1;Name=WP_221068854.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005424871.1;locus_tag=VA249_RS03045;product=GspH/FimT family pseudopilin;protein_id=WP_221068854.1;transl_table=11 NZ_AP024165.1 RefSeq gene 661564 662193 . + . ID=gene-VA249_RS03050;Name=VA249_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03050;old_locus_tag=VYA_05900 NZ_AP024165.1 Protein Homology CDS 661564 662193 . + 0 ID=cds-WP_221068856.1;Parent=gene-VA249_RS03050;Dbxref=Genbank:WP_221068856.1;Name=WP_221068856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533714.1;locus_tag=VA249_RS03050;product=pilus assembly protein PilW;protein_id=WP_221068856.1;transl_table=11 NZ_AP024165.1 RefSeq gene 662190 663431 . + . ID=gene-VA249_RS03055;Name=VA249_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03055;old_locus_tag=VYA_05910 NZ_AP024165.1 Protein Homology CDS 662190 663431 . + 0 ID=cds-WP_221068866.1;Parent=gene-VA249_RS03055;Dbxref=Genbank:WP_221068866.1;Name=WP_221068866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127141.1;locus_tag=VA249_RS03055;product=hypothetical protein;protein_id=WP_221068866.1;transl_table=11 NZ_AP024165.1 RefSeq gene 663421 663831 . + . ID=gene-VA249_RS03060;Name=VA249_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03060;old_locus_tag=VYA_05920 NZ_AP024165.1 Protein Homology CDS 663421 663831 . + 0 ID=cds-WP_128811492.1;Parent=gene-VA249_RS03060;Dbxref=Genbank:WP_128811492.1;Name=WP_128811492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697708.1;locus_tag=VA249_RS03060;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_128811492.1;transl_table=11 NZ_AP024165.1 RefSeq gene 664134 665693 . + . ID=gene-VA249_RS03065;Name=VA249_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03065;old_locus_tag=VYA_05930 NZ_AP024165.1 Protein Homology CDS 664134 665693 . + 0 ID=cds-WP_221068868.1;Parent=gene-VA249_RS03065;Dbxref=Genbank:WP_221068868.1;Name=WP_221068868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483074.1;locus_tag=VA249_RS03065;product=AbgT family transporter;protein_id=WP_221068868.1;transl_table=11 NZ_AP024165.1 RefSeq gene 665874 666425 . + . ID=gene-VA249_RS03070;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=VA249_RS03070;old_locus_tag=VYA_05940 NZ_AP024165.1 Protein Homology CDS 665874 666425 . + 0 ID=cds-WP_221068870.1;Parent=gene-VA249_RS03070;Dbxref=Genbank:WP_221068870.1;Name=WP_221068870.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005424839.1;locus_tag=VA249_RS03070;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_221068870.1;transl_table=11 NZ_AP024165.1 RefSeq gene 666506 666640 . - . ID=gene-VA249_RS24215;Name=VA249_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24215;old_locus_tag=VYA_05950 NZ_AP024165.1 Protein Homology CDS 666506 666640 . - 0 ID=cds-WP_128811490.1;Parent=gene-VA249_RS24215;Dbxref=Genbank:WP_128811490.1;Name=WP_128811490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005424864.1;locus_tag=VA249_RS24215;product=hypothetical protein;protein_id=WP_128811490.1;transl_table=11 NZ_AP024165.1 RefSeq gene 666928 668508 . - . ID=gene-VA249_RS03075;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=VA249_RS03075;old_locus_tag=VYA_05960 NZ_AP024165.1 Protein Homology CDS 666928 668508 . - 0 ID=cds-WP_221068872.1;Parent=gene-VA249_RS03075;Dbxref=Genbank:WP_221068872.1;Name=WP_221068872.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705614.1;locus_tag=VA249_RS03075;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_221068872.1;transl_table=11 NZ_AP024165.1 RefSeq gene 668832 672755 . + . ID=gene-VA249_RS03080;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=VA249_RS03080;old_locus_tag=VYA_05970 NZ_AP024165.1 Protein Homology CDS 668832 672755 . + 0 ID=cds-WP_221068874.1;Parent=gene-VA249_RS03080;Dbxref=Genbank:WP_221068874.1;Name=WP_221068874.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006878659.1;locus_tag=VA249_RS03080;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_221068874.1;transl_table=11 NZ_AP024165.1 RefSeq gene 672973 673278 . + . ID=gene-VA249_RS03085;Name=VA249_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03085;old_locus_tag=VYA_05980 NZ_AP024165.1 Protein Homology CDS 672973 673278 . + 0 ID=cds-WP_211919889.1;Parent=gene-VA249_RS03085;Dbxref=Genbank:WP_211919889.1;Name=WP_211919889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010648184.1;locus_tag=VA249_RS03085;product=DUF3622 domain-containing protein;protein_id=WP_211919889.1;transl_table=11 NZ_AP024165.1 RefSeq gene 673344 674417 . - . ID=gene-VA249_RS03090;Name=VA249_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03090;old_locus_tag=VYA_05990 NZ_AP024165.1 Protein Homology CDS 673344 674417 . - 0 ID=cds-WP_128811486.1;Parent=gene-VA249_RS03090;Dbxref=Genbank:WP_128811486.1;Name=WP_128811486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455969.1;locus_tag=VA249_RS03090;product=M14 family metallopeptidase;protein_id=WP_128811486.1;transl_table=11 NZ_AP024165.1 RefSeq gene 674752 675291 . + . ID=gene-VA249_RS03095;Name=VA249_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03095;old_locus_tag=VYA_06000 NZ_AP024165.1 Protein Homology CDS 674752 675291 . + 0 ID=cds-WP_128811485.1;Parent=gene-VA249_RS03095;Dbxref=Genbank:WP_128811485.1;Name=WP_128811485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455994.1;locus_tag=VA249_RS03095;product=DUF3332 domain-containing protein;protein_id=WP_128811485.1;transl_table=11 NZ_AP024165.1 RefSeq gene 675376 676848 . - . ID=gene-VA249_RS03100;Name=VA249_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03100;old_locus_tag=VYA_06010 NZ_AP024165.1 Protein Homology CDS 675376 676848 . - 0 ID=cds-WP_221068878.1;Parent=gene-VA249_RS03100;Dbxref=Genbank:WP_221068878.1;Name=WP_221068878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391422.1;locus_tag=VA249_RS03100;product=aminoacyl-histidine dipeptidase;protein_id=WP_221068878.1;transl_table=11 NZ_AP024165.1 RefSeq gene 677920 679209 . + . ID=gene-VA249_RS03105;Name=VA249_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03105;old_locus_tag=VYA_06020 NZ_AP024165.1 Protein Homology CDS 677920 679209 . + 0 ID=cds-WP_128811482.1;Parent=gene-VA249_RS03105;Dbxref=Genbank:WP_128811482.1;Name=WP_128811482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446297.1;locus_tag=VA249_RS03105;product=NCS2 family permease;protein_id=WP_128811482.1;transl_table=11 NZ_AP024165.1 RefSeq gene 679506 679970 . + . ID=gene-VA249_RS03110;Name=tet(34);gbkey=Gene;gene=tet(34);gene_biotype=protein_coding;locus_tag=VA249_RS03110;old_locus_tag=VYA_06030 NZ_AP024165.1 Protein Homology CDS 679506 679970 . + 0 ID=cds-WP_005447605.1;Parent=gene-VA249_RS03110;Dbxref=Genbank:WP_005447605.1;Name=WP_005447605.1;gbkey=CDS;gene=tet(34);inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592781.1;locus_tag=VA249_RS03110;product=oxytetracycline resistance phosphoribosyltransferase domain-containing protein Tet(34);protein_id=WP_005447605.1;transl_table=11 NZ_AP024165.1 RefSeq gene 680061 681308 . + . ID=gene-VA249_RS03115;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=VA249_RS03115;old_locus_tag=VYA_06040 NZ_AP024165.1 Protein Homology CDS 680061 681308 . + 0 ID=cds-WP_221068879.1;Parent=gene-VA249_RS03115;Dbxref=Genbank:WP_221068879.1;Name=WP_221068879.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820603.1;locus_tag=VA249_RS03115;product=esterase FrsA;protein_id=WP_221068879.1;transl_table=11 NZ_AP024165.1 RefSeq gene 681423 681812 . + . ID=gene-VA249_RS03120;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=VA249_RS03120;old_locus_tag=VYA_06050 NZ_AP024165.1 Protein Homology CDS 681423 681812 . + 0 ID=cds-WP_128811479.1;Parent=gene-VA249_RS03120;Dbxref=Genbank:WP_128811479.1;Name=WP_128811479.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448804.1;locus_tag=VA249_RS03120;product=sigma factor-binding protein Crl;protein_id=WP_128811479.1;transl_table=11 NZ_AP024165.1 RefSeq gene 681935 683074 . + . ID=gene-VA249_RS03125;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=VA249_RS03125;old_locus_tag=VYA_06060 NZ_AP024165.1 Protein Homology CDS 681935 683074 . + 0 ID=cds-WP_128811478.1;Parent=gene-VA249_RS03125;Dbxref=Genbank:WP_128811478.1;Name=WP_128811478.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820604.1;locus_tag=VA249_RS03125;product=glutamate 5-kinase;protein_id=WP_128811478.1;transl_table=11 NZ_AP024165.1 RefSeq gene 683092 684342 . + . ID=gene-VA249_RS03130;Name=VA249_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03130;old_locus_tag=VYA_06070 NZ_AP024165.1 Protein Homology CDS 683092 684342 . + 0 ID=cds-WP_221068880.1;Parent=gene-VA249_RS03130;Dbxref=Genbank:WP_221068880.1;Name=WP_221068880.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004724920.1;locus_tag=VA249_RS03130;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_221068880.1;transl_table=11 NZ_AP024165.1 RefSeq gene 684469 684918 . + . ID=gene-VA249_RS03135;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=VA249_RS03135;old_locus_tag=VYA_06080 NZ_AP024165.1 Protein Homology CDS 684469 684918 . + 0 ID=cds-WP_128811476.1;Parent=gene-VA249_RS03135;Dbxref=Genbank:WP_128811476.1;Name=WP_128811476.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000543544.1;locus_tag=VA249_RS03135;product=transcriptional regulator NrdR;protein_id=WP_128811476.1;transl_table=11 NZ_AP024165.1 RefSeq gene 684926 686050 . + . ID=gene-VA249_RS03140;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=VA249_RS03140;old_locus_tag=VYA_06090 NZ_AP024165.1 Protein Homology CDS 684926 686050 . + 0 ID=cds-WP_221069793.1;Parent=gene-VA249_RS03140;Dbxref=Genbank:WP_221069793.1;Name=WP_221069793.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705622.1;locus_tag=VA249_RS03140;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_221069793.1;transl_table=11 NZ_AP024165.1 RefSeq gene 686062 686715 . + . ID=gene-VA249_RS03145;Name=VA249_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03145;old_locus_tag=VYA_06100 NZ_AP024165.1 Protein Homology CDS 686062 686715 . + 0 ID=cds-WP_221068881.1;Parent=gene-VA249_RS03145;Dbxref=Genbank:WP_221068881.1;Name=WP_221068881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522408.1;locus_tag=VA249_RS03145;product=riboflavin synthase;protein_id=WP_221068881.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 686874 687982 . + . ID=gene-VA249_RS03150;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=pseudogene;locus_tag=VA249_RS03150;old_locus_tag=VYA_06110;pseudo=true NZ_AP024165.1 Protein Homology CDS 686874 687982 . + 0 ID=cds-VA249_RS03150;Parent=gene-VA249_RS03150;Note=frameshifted;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231011.1;locus_tag=VA249_RS03150;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 688152 688622 . + . ID=gene-VA249_RS03155;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=VA249_RS03155;old_locus_tag=VYA_06130 NZ_AP024165.1 Protein Homology CDS 688152 688622 . + 0 ID=cds-WP_099080888.1;Parent=gene-VA249_RS03155;Dbxref=Genbank:WP_099080888.1;Name=WP_099080888.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006957919.1;locus_tag=VA249_RS03155;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_099080888.1;transl_table=11 NZ_AP024165.1 RefSeq gene 688622 689089 . + . ID=gene-VA249_RS03160;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=VA249_RS03160;old_locus_tag=VYA_06140 NZ_AP024165.1 Protein Homology CDS 688622 689089 . + 0 ID=cds-WP_128811472.1;Parent=gene-VA249_RS03160;Dbxref=Genbank:WP_128811472.1;Name=WP_128811472.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440182.1;locus_tag=VA249_RS03160;product=transcription antitermination factor NusB;protein_id=WP_128811472.1;transl_table=11 NZ_AP024165.1 RefSeq gene 689152 690117 . + . ID=gene-VA249_RS03165;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=VA249_RS03165;old_locus_tag=VYA_06150 NZ_AP024165.1 Protein Homology CDS 689152 690117 . + 0 ID=cds-WP_221068882.1;Parent=gene-VA249_RS03165;Dbxref=Genbank:WP_221068882.1;Name=WP_221068882.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333701.1;locus_tag=VA249_RS03165;product=thiamine-phosphate kinase;protein_id=WP_221068882.1;transl_table=11 NZ_AP024165.1 RefSeq gene 690195 690704 . + . ID=gene-VA249_RS03170;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=VA249_RS03170;old_locus_tag=VYA_06160 NZ_AP024165.1 Protein Homology CDS 690195 690704 . + 0 ID=cds-WP_128811470.1;Parent=gene-VA249_RS03170;Dbxref=Genbank:WP_128811470.1;Name=WP_128811470.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734401.1;locus_tag=VA249_RS03170;product=phosphatidylglycerophosphatase A;protein_id=WP_128811470.1;transl_table=11 NZ_AP024165.1 RefSeq gene 690821 692686 . - . ID=gene-VA249_RS03175;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=VA249_RS03175;old_locus_tag=VYA_06170 NZ_AP024165.1 Protein Homology CDS 690821 692686 . - 0 ID=cds-WP_221068884.1;Parent=gene-VA249_RS03175;Dbxref=Genbank:WP_221068884.1;Name=WP_221068884.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633413.1;locus_tag=VA249_RS03175;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_221068884.1;transl_table=11 NZ_AP024165.1 RefSeq gene 692707 693591 . - . ID=gene-VA249_RS03180;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=VA249_RS03180;old_locus_tag=VYA_06180 NZ_AP024165.1 Protein Homology CDS 692707 693591 . - 0 ID=cds-WP_221068886.1;Parent=gene-VA249_RS03180;Dbxref=Genbank:WP_221068886.1;Name=WP_221068886.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568607.1;locus_tag=VA249_RS03180;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_221068886.1;transl_table=11 NZ_AP024165.1 RefSeq gene 693613 693855 . - . ID=gene-VA249_RS03185;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=VA249_RS03185;old_locus_tag=VYA_06190 NZ_AP024165.1 Protein Homology CDS 693613 693855 . - 0 ID=cds-WP_211919879.1;Parent=gene-VA249_RS03185;Dbxref=Genbank:WP_211919879.1;Name=WP_211919879.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078418.1;locus_tag=VA249_RS03185;product=exodeoxyribonuclease VII small subunit;protein_id=WP_211919879.1;transl_table=11 NZ_AP024165.1 RefSeq gene 694121 694882 . + . ID=gene-VA249_RS03190;Name=pomA;gbkey=Gene;gene=pomA;gene_biotype=protein_coding;locus_tag=VA249_RS03190;old_locus_tag=VYA_06200 NZ_AP024165.1 Protein Homology CDS 694121 694882 . + 0 ID=cds-WP_128811466.1;Parent=gene-VA249_RS03190;Dbxref=Genbank:WP_128811466.1;Name=WP_128811466.1;gbkey=CDS;gene=pomA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446362.1;locus_tag=VA249_RS03190;product=flagellar motor protein PomA;protein_id=WP_128811466.1;transl_table=11 NZ_AP024165.1 RefSeq gene 694897 695841 . + . ID=gene-VA249_RS03195;Name=VA249_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03195;old_locus_tag=VYA_06210 NZ_AP024165.1 Protein Homology CDS 694897 695841 . + 0 ID=cds-WP_164837213.1;Parent=gene-VA249_RS03195;Dbxref=Genbank:WP_164837213.1;Name=WP_164837213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196457.1;locus_tag=VA249_RS03195;product=flagellar motor protein MotB;protein_id=WP_164837213.1;transl_table=11 NZ_AP024165.1 RefSeq gene 696136 697584 . + . ID=gene-VA249_RS03200;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=VA249_RS03200;old_locus_tag=VYA_06220 NZ_AP024165.1 Protein Homology CDS 696136 697584 . + 0 ID=cds-WP_211919877.1;Parent=gene-VA249_RS03200;Dbxref=Genbank:WP_211919877.1;Name=WP_211919877.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231021.1;locus_tag=VA249_RS03200;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_211919877.1;transl_table=11 NZ_AP024165.1 RefSeq gene 698102 699022 . + . ID=gene-VA249_RS03205;Name=VA249_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03205;old_locus_tag=VYA_06240 NZ_AP024165.1 Protein Homology CDS 698102 699022 . + 0 ID=cds-WP_211919876.1;Parent=gene-VA249_RS03205;Dbxref=Genbank:WP_211919876.1;Name=WP_211919876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530659.1;locus_tag=VA249_RS03205;product=transcriptional regulator GcvA;protein_id=WP_211919876.1;transl_table=11 NZ_AP024165.1 RefSeq gene 699003 699626 . + . ID=gene-VA249_RS03210;Name=VA249_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03210;old_locus_tag=VYA_06250 NZ_AP024165.1 Protein Homology CDS 699003 699626 . + 0 ID=cds-WP_221068888.1;Parent=gene-VA249_RS03210;Dbxref=Genbank:WP_221068888.1;Name=WP_221068888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127167.1;locus_tag=VA249_RS03210;product=alpha/beta fold hydrolase;protein_id=WP_221068888.1;transl_table=11 NZ_AP024165.1 RefSeq gene 699616 700014 . + . ID=gene-VA249_RS03215;Name=VA249_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03215;old_locus_tag=VYA_06260 NZ_AP024165.1 Protein Homology CDS 699616 700014 . + 0 ID=cds-WP_221068890.1;Parent=gene-VA249_RS03215;Dbxref=Genbank:WP_221068890.1;Name=WP_221068890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391376.1;locus_tag=VA249_RS03215;product=DUF423 domain-containing protein;protein_id=WP_221068890.1;transl_table=11 NZ_AP024165.1 RefSeq gene 700011 701102 . + . ID=gene-VA249_RS03220;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=VA249_RS03220;old_locus_tag=VYA_06270 NZ_AP024165.1 Protein Homology CDS 700011 701102 . + 0 ID=cds-WP_128811461.1;Parent=gene-VA249_RS03220;Dbxref=Genbank:WP_128811461.1;Name=WP_128811461.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017060773.1;locus_tag=VA249_RS03220;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_128811461.1;transl_table=11 NZ_AP024165.1 RefSeq gene 701219 702001 . - . ID=gene-VA249_RS03225;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=VA249_RS03225;old_locus_tag=VYA_06280 NZ_AP024165.1 Protein Homology CDS 701219 702001 . - 0 ID=cds-WP_221068892.1;Parent=gene-VA249_RS03225;Dbxref=Genbank:WP_221068892.1;Name=WP_221068892.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005459149.1;locus_tag=VA249_RS03225;product=flap endonuclease Xni;protein_id=WP_221068892.1;transl_table=11 NZ_AP024165.1 RefSeq gene 702060 703436 . - . ID=gene-VA249_RS03230;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=VA249_RS03230;old_locus_tag=VYA_06290 NZ_AP024165.1 Protein Homology CDS 702060 703436 . - 0 ID=cds-WP_221068895.1;Parent=gene-VA249_RS03230;Dbxref=Genbank:WP_221068895.1;Name=WP_221068895.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743206.1;locus_tag=VA249_RS03230;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_221068895.1;transl_table=11 NZ_AP024165.1 RefSeq gene 703689 705254 . - . ID=gene-VA249_RS03235;Name=VA249_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03235;old_locus_tag=VYA_06300 NZ_AP024165.1 Protein Homology CDS 703689 705254 . - 0 ID=cds-WP_221068897.1;Parent=gene-VA249_RS03235;Dbxref=Genbank:WP_221068897.1;Name=WP_221068897.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447568.1;locus_tag=VA249_RS03235;product=diguanylate cyclase;protein_id=WP_221068897.1;transl_table=11 NZ_AP024165.1 RefSeq gene 705354 707639 . - . ID=gene-VA249_RS03240;Name=VA249_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03240;old_locus_tag=VYA_06310 NZ_AP024165.1 Protein Homology CDS 705354 707639 . - 0 ID=cds-WP_221068899.1;Parent=gene-VA249_RS03240;Dbxref=Genbank:WP_221068899.1;Name=WP_221068899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530676.1;locus_tag=VA249_RS03240;product=tetratricopeptide repeat protein;protein_id=WP_221068899.1;transl_table=11 NZ_AP024165.1 RefSeq gene 707733 708578 . - . ID=gene-VA249_RS03245;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=VA249_RS03245;old_locus_tag=VYA_06320 NZ_AP024165.1 Protein Homology CDS 707733 708578 . - 0 ID=cds-WP_221068901.1;Parent=gene-VA249_RS03245;Dbxref=Genbank:WP_221068901.1;Name=WP_221068901.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697730.1;locus_tag=VA249_RS03245;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_221068901.1;transl_table=11 NZ_AP024165.1 RefSeq gene 708687 709232 . + . ID=gene-VA249_RS03250;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=VA249_RS03250;old_locus_tag=VYA_06330 NZ_AP024165.1 Protein Homology CDS 708687 709232 . + 0 ID=cds-WP_128811455.1;Parent=gene-VA249_RS03250;Dbxref=Genbank:WP_128811455.1;Name=WP_128811455.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012604631.1;locus_tag=VA249_RS03250;product=SecY-interacting protein;protein_id=WP_128811455.1;transl_table=11 NZ_AP024165.1 RefSeq gene 709235 710011 . + . ID=gene-VA249_RS03255;Name=VA249_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03255;old_locus_tag=VYA_06340 NZ_AP024165.1 Protein Homology CDS 709235 710011 . + 0 ID=cds-WP_221068903.1;Parent=gene-VA249_RS03255;Dbxref=Genbank:WP_221068903.1;Name=WP_221068903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002051505.1;locus_tag=VA249_RS03255;product=Zn-ribbon-containing protein;protein_id=WP_221068903.1;transl_table=11 NZ_AP024165.1 RefSeq gene 710123 710932 . - . ID=gene-VA249_RS03260;Name=VA249_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03260;old_locus_tag=VYA_06350 NZ_AP024165.1 Protein Homology CDS 710123 710932 . - 0 ID=cds-WP_221068905.1;Parent=gene-VA249_RS03260;Dbxref=Genbank:WP_221068905.1;Name=WP_221068905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020328076.1;locus_tag=VA249_RS03260;product=MetQ/NlpA family lipoprotein;protein_id=WP_221068905.1;transl_table=11 NZ_AP024165.1 RefSeq gene 710965 711642 . - . ID=gene-VA249_RS03265;Name=VA249_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03265;old_locus_tag=VYA_06360 NZ_AP024165.1 Protein Homology CDS 710965 711642 . - 0 ID=cds-WP_128811452.1;Parent=gene-VA249_RS03265;Dbxref=Genbank:WP_128811452.1;Name=WP_128811452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004395739.1;locus_tag=VA249_RS03265;product=ABC transporter permease;protein_id=WP_128811452.1;transl_table=11 NZ_AP024165.1 RefSeq gene 711632 712666 . - . ID=gene-VA249_RS03270;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=VA249_RS03270;old_locus_tag=VYA_06370 NZ_AP024165.1 Protein Homology CDS 711632 712666 . - 0 ID=cds-WP_221068906.1;Parent=gene-VA249_RS03270;Dbxref=Genbank:WP_221068906.1;Name=WP_221068906.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004400810.1;locus_tag=VA249_RS03270;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_221068906.1;transl_table=11 NZ_AP024165.1 RefSeq gene 713008 713559 . + . ID=gene-VA249_RS03275;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=VA249_RS03275;old_locus_tag=VYA_06380 NZ_AP024165.1 Protein Homology CDS 713008 713559 . + 0 ID=cds-WP_128811450.1;Parent=gene-VA249_RS03275;Dbxref=Genbank:WP_128811450.1;Name=WP_128811450.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231036.1;locus_tag=VA249_RS03275;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_128811450.1;transl_table=11 NZ_AP024165.1 RefSeq gene 713634 714581 . + . ID=gene-VA249_RS03280;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=VA249_RS03280;old_locus_tag=VYA_06390 NZ_AP024165.1 Protein Homology CDS 713634 714581 . + 0 ID=cds-WP_221068907.1;Parent=gene-VA249_RS03280;Dbxref=Genbank:WP_221068907.1;Name=WP_221068907.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432669.1;locus_tag=VA249_RS03280;product=trehalose operon repressor TreR;protein_id=WP_221068907.1;transl_table=11 NZ_AP024165.1 RefSeq gene 714757 716181 . + . ID=gene-VA249_RS03285;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=VA249_RS03285;old_locus_tag=VYA_06400 NZ_AP024165.1 Protein Homology CDS 714757 716181 . + 0 ID=cds-WP_221068908.1;Parent=gene-VA249_RS03285;Dbxref=Genbank:WP_221068908.1;Name=WP_221068908.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016021;gbkey=CDS;gene=treB;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818927.1;locus_tag=VA249_RS03285;product=PTS trehalose transporter subunit IIBC;protein_id=WP_221068908.1;transl_table=11 NZ_AP024165.1 RefSeq gene 716274 717959 . + . ID=gene-VA249_RS03290;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=VA249_RS03290;old_locus_tag=VYA_06410 NZ_AP024165.1 Protein Homology CDS 716274 717959 . + 0 ID=cds-WP_221068909.1;Parent=gene-VA249_RS03290;Dbxref=Genbank:WP_221068909.1;Name=WP_221068909.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296345.1;locus_tag=VA249_RS03290;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_221068909.1;transl_table=11 NZ_AP024165.1 RefSeq gene 718039 718641 . - . ID=gene-VA249_RS03295;Name=VA249_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03295;old_locus_tag=VYA_06420 NZ_AP024165.1 Protein Homology CDS 718039 718641 . - 0 ID=cds-WP_221068910.1;Parent=gene-VA249_RS03295;Dbxref=Genbank:WP_221068910.1;Name=WP_221068910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017106296.1;locus_tag=VA249_RS03295;product=YitT family protein;protein_id=WP_221068910.1;transl_table=11 NZ_AP024165.1 RefSeq gene 718988 720238 . + . ID=gene-VA249_RS03300;Name=VA249_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03300;old_locus_tag=VYA_06430 NZ_AP024165.1 Protein Homology CDS 718988 720238 . + 0 ID=cds-WP_221068911.1;Parent=gene-VA249_RS03300;Dbxref=Genbank:WP_221068911.1;Name=WP_221068911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=VA249_RS03300;product=serine hydroxymethyltransferase;protein_id=WP_221068911.1;transl_table=11 NZ_AP024165.1 RefSeq gene 720541 721506 . - . ID=gene-VA249_RS03305;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=VA249_RS03305;old_locus_tag=VYA_06440 NZ_AP024165.1 Protein Homology CDS 720541 721506 . - 0 ID=cds-WP_128811444.1;Parent=gene-VA249_RS03305;Dbxref=Genbank:WP_128811444.1;Name=WP_128811444.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013572281.1;locus_tag=VA249_RS03305;product=lipoyl synthase;protein_id=WP_128811444.1;transl_table=11 NZ_AP024165.1 RefSeq gene 721503 722165 . - . ID=gene-VA249_RS03310;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=VA249_RS03310;old_locus_tag=VYA_06450 NZ_AP024165.1 Protein Homology CDS 721503 722165 . - 0 ID=cds-WP_128811443.1;Parent=gene-VA249_RS03310;Dbxref=Genbank:WP_128811443.1;Name=WP_128811443.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296348.1;locus_tag=VA249_RS03310;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_128811443.1;transl_table=11 NZ_AP024165.1 RefSeq gene 722342 722620 . - . ID=gene-VA249_RS03315;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=VA249_RS03315;old_locus_tag=VYA_06460 NZ_AP024165.1 Protein Homology CDS 722342 722620 . - 0 ID=cds-WP_005384135.1;Parent=gene-VA249_RS03315;Dbxref=Genbank:WP_005384135.1;Name=WP_005384135.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006881648.1;locus_tag=VA249_RS03315;product=DUF493 family protein YbeD;protein_id=WP_005384135.1;transl_table=11 NZ_AP024165.1 RefSeq gene 722782 723960 . - . ID=gene-VA249_RS03320;Name=VA249_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03320;old_locus_tag=VYA_06470 NZ_AP024165.1 Protein Homology CDS 722782 723960 . - 0 ID=cds-WP_128811442.1;Parent=gene-VA249_RS03320;Dbxref=Genbank:WP_128811442.1;Name=WP_128811442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447533.1;locus_tag=VA249_RS03320;product=serine hydrolase;protein_id=WP_128811442.1;transl_table=11 NZ_AP024165.1 RefSeq gene 724050 724850 . - . ID=gene-VA249_RS03325;Name=VA249_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03325;old_locus_tag=VYA_06480 NZ_AP024165.1 Protein Homology CDS 724050 724850 . - 0 ID=cds-WP_221068912.1;Parent=gene-VA249_RS03325;Dbxref=Genbank:WP_221068912.1;Name=WP_221068912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005496218.1;locus_tag=VA249_RS03325;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_221068912.1;transl_table=11 NZ_AP024165.1 RefSeq gene 724854 725975 . - . ID=gene-VA249_RS03330;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=VA249_RS03330;old_locus_tag=VYA_06490 NZ_AP024165.1 Protein Homology CDS 724854 725975 . - 0 ID=cds-WP_128811440.1;Parent=gene-VA249_RS03330;Dbxref=Genbank:WP_128811440.1;Name=WP_128811440.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008224160.1;locus_tag=VA249_RS03330;product=rod shape-determining protein RodA;protein_id=WP_128811440.1;transl_table=11 NZ_AP024165.1 RefSeq gene 725975 727900 . - . ID=gene-VA249_RS03335;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=VA249_RS03335;old_locus_tag=VYA_06500 NZ_AP024165.1 Protein Homology CDS 725975 727900 . - 0 ID=cds-WP_221068913.1;Parent=gene-VA249_RS03335;Dbxref=Genbank:WP_221068913.1;Name=WP_221068913.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438580.1;locus_tag=VA249_RS03335;product=penicillin-binding protein 2;protein_id=WP_221068913.1;transl_table=11 NZ_AP024165.1 RefSeq gene 727930 728400 . - . ID=gene-VA249_RS03340;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=VA249_RS03340;old_locus_tag=VYA_06510 NZ_AP024165.1 Protein Homology CDS 727930 728400 . - 0 ID=cds-WP_017821762.1;Parent=gene-VA249_RS03340;Dbxref=Genbank:WP_017821762.1;Name=WP_017821762.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020328003.1;locus_tag=VA249_RS03340;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_017821762.1;transl_table=11 NZ_AP024165.1 RefSeq gene 728404 728721 . - . ID=gene-VA249_RS03345;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=VA249_RS03345;old_locus_tag=VYA_06520 NZ_AP024165.1 Protein Homology CDS 728404 728721 . - 0 ID=cds-WP_211919860.1;Parent=gene-VA249_RS03345;Dbxref=Genbank:WP_211919860.1;Name=WP_211919860.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008224165.1;locus_tag=VA249_RS03345;product=ribosome silencing factor;protein_id=WP_211919860.1;transl_table=11 NZ_AP024165.1 RefSeq gene 728810 729829 . - . ID=gene-VA249_RS03350;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=VA249_RS03350;old_locus_tag=VYA_06530 NZ_AP024165.1 Protein Homology CDS 728810 729829 . - 0 ID=cds-WP_221068914.1;Parent=gene-VA249_RS03350;Dbxref=Genbank:WP_221068914.1;Name=WP_221068914.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447513.1;locus_tag=VA249_RS03350;product=DNA polymerase III subunit delta;protein_id=WP_221068914.1;transl_table=11 NZ_AP024165.1 RefSeq gene 729836 730378 . - . ID=gene-VA249_RS03355;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=VA249_RS03355;old_locus_tag=VYA_06540 NZ_AP024165.1 Protein Homology CDS 729836 730378 . - 0 ID=cds-WP_221068915.1;Parent=gene-VA249_RS03355;Dbxref=Genbank:WP_221068915.1;Name=WP_221068915.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078382.1;locus_tag=VA249_RS03355;product=LPS assembly lipoprotein LptE;protein_id=WP_221068915.1;transl_table=11 NZ_AP024165.1 RefSeq gene 730613 733186 . - . ID=gene-VA249_RS03360;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=VA249_RS03360;old_locus_tag=VYA_06550 NZ_AP024165.1 Protein Homology CDS 730613 733186 . - 0 ID=cds-WP_221068916.1;Parent=gene-VA249_RS03360;Dbxref=Genbank:WP_221068916.1;Name=WP_221068916.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078381.1;locus_tag=VA249_RS03360;product=leucine--tRNA ligase;protein_id=WP_221068916.1;transl_table=11 NZ_AP024165.1 RefSeq gene 733341 733811 . + . ID=gene-VA249_RS03365;Name=VA249_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03365;old_locus_tag=VYA_06560 NZ_AP024165.1 Protein Homology CDS 733341 733811 . + 0 ID=cds-WP_221068917.1;Parent=gene-VA249_RS03365;Dbxref=Genbank:WP_221068917.1;Name=WP_221068917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735251.1;locus_tag=VA249_RS03365;product=zinc ribbon-containing protein;protein_id=WP_221068917.1;transl_table=11 NZ_AP024165.1 RefSeq gene 733885 735405 . - . ID=gene-VA249_RS03370;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=VA249_RS03370;old_locus_tag=VYA_06570 NZ_AP024165.1 Protein Homology CDS 733885 735405 . - 0 ID=cds-WP_221068918.1;Parent=gene-VA249_RS03370;Dbxref=Genbank:WP_221068918.1;Name=WP_221068918.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016021;gbkey=CDS;gene=lnt;go_component=integral component of membrane|0016021||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011149712.1;locus_tag=VA249_RS03370;product=apolipoprotein N-acyltransferase;protein_id=WP_221068918.1;transl_table=11 NZ_AP024165.1 RefSeq gene 735442 736341 . - . ID=gene-VA249_RS03375;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=VA249_RS03375;old_locus_tag=VYA_06580 NZ_AP024165.1 Protein Homology CDS 735442 736341 . - 0 ID=cds-WP_128811433.1;Parent=gene-VA249_RS03375;Dbxref=Genbank:WP_128811433.1;Name=WP_128811433.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384118.1;locus_tag=VA249_RS03375;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_128811433.1;transl_table=11 NZ_AP024165.1 RefSeq gene 736448 736912 . - . ID=gene-VA249_RS03380;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=VA249_RS03380;old_locus_tag=VYA_06590 NZ_AP024165.1 Protein Homology CDS 736448 736912 . - 0 ID=cds-WP_221068925.1;Parent=gene-VA249_RS03380;Dbxref=Genbank:WP_221068925.1;Name=WP_221068925.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391311.1;locus_tag=VA249_RS03380;product=rRNA maturation RNase YbeY;protein_id=WP_221068925.1;transl_table=11 NZ_AP024165.1 RefSeq gene 736915 738012 . - . ID=gene-VA249_RS03385;Name=VA249_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03385;old_locus_tag=VYA_06600 NZ_AP024165.1 Protein Homology CDS 736915 738012 . - 0 ID=cds-WP_128811432.1;Parent=gene-VA249_RS03385;Dbxref=Genbank:WP_128811432.1;Name=WP_128811432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483495.1;locus_tag=VA249_RS03385;product=PhoH family protein;protein_id=WP_128811432.1;transl_table=11 NZ_AP024165.1 RefSeq gene 738114 739538 . - . ID=gene-VA249_RS03390;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=VA249_RS03390;old_locus_tag=VYA_06610 NZ_AP024165.1 Protein Homology CDS 738114 739538 . - 0 ID=cds-WP_221068927.1;Parent=gene-VA249_RS03390;Dbxref=Genbank:WP_221068927.1;Name=WP_221068927.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013857327.1;locus_tag=VA249_RS03390;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_221068927.1;transl_table=11 NZ_AP024165.1 RefSeq gene 739889 741064 . + . ID=gene-VA249_RS03395;Name=VA249_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03395;old_locus_tag=VYA_06620 NZ_AP024165.1 Protein Homology CDS 739889 741064 . + 0 ID=cds-WP_221068929.1;Parent=gene-VA249_RS03395;Dbxref=Genbank:WP_221068929.1;Name=WP_221068929.1;Ontology_term=GO:0006744,GO:0016705,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697743.1;locus_tag=VA249_RS03395;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_221068929.1;transl_table=11 NZ_AP024165.1 RefSeq gene 741206 741290 . - . ID=gene-VA249_RS03400;Name=VA249_RS03400;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03400;old_locus_tag=VYA_t00170 NZ_AP024165.1 tRNAscan-SE tRNA 741206 741290 . - . ID=rna-VA249_RS03400;Parent=gene-VA249_RS03400;anticodon=(pos:complement(741254..741256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03400;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 741206 741290 . - . ID=exon-VA249_RS03400-1;Parent=rna-VA249_RS03400;anticodon=(pos:complement(741254..741256));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03400;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 741345 741419 . - . ID=gene-VA249_RS03405;Name=VA249_RS03405;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03405;old_locus_tag=VYA_t00180 NZ_AP024165.1 tRNAscan-SE tRNA 741345 741419 . - . ID=rna-VA249_RS03405;Parent=gene-VA249_RS03405;anticodon=(pos:complement(741385..741387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03405;product=tRNA-Gln NZ_AP024165.1 tRNAscan-SE exon 741345 741419 . - . ID=exon-VA249_RS03405-1;Parent=rna-VA249_RS03405;anticodon=(pos:complement(741385..741387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03405;product=tRNA-Gln NZ_AP024165.1 RefSeq gene 741467 741551 . - . ID=gene-VA249_RS03410;Name=VA249_RS03410;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03410;old_locus_tag=VYA_t00190 NZ_AP024165.1 tRNAscan-SE tRNA 741467 741551 . - . ID=rna-VA249_RS03410;Parent=gene-VA249_RS03410;anticodon=(pos:complement(741515..741517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03410;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 741467 741551 . - . ID=exon-VA249_RS03410-1;Parent=rna-VA249_RS03410;anticodon=(pos:complement(741515..741517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03410;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 741606 741682 . - . ID=gene-VA249_RS03415;Name=VA249_RS03415;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03415;old_locus_tag=VYA_t00200 NZ_AP024165.1 tRNAscan-SE tRNA 741606 741682 . - . ID=rna-VA249_RS03415;Parent=gene-VA249_RS03415;anticodon=(pos:complement(741646..741648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03415;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 741606 741682 . - . ID=exon-VA249_RS03415-1;Parent=rna-VA249_RS03415;anticodon=(pos:complement(741646..741648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03415;product=tRNA-Met NZ_AP024165.1 RefSeq gene 741705 741789 . - . ID=gene-VA249_RS03420;Name=VA249_RS03420;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03420;old_locus_tag=VYA_t00210 NZ_AP024165.1 tRNAscan-SE tRNA 741705 741789 . - . ID=rna-VA249_RS03420;Parent=gene-VA249_RS03420;anticodon=(pos:complement(741753..741755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03420;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 741705 741789 . - . ID=exon-VA249_RS03420-1;Parent=rna-VA249_RS03420;anticodon=(pos:complement(741753..741755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03420;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 741855 741929 . - . ID=gene-VA249_RS03425;Name=VA249_RS03425;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03425;old_locus_tag=VYA_t00220 NZ_AP024165.1 tRNAscan-SE tRNA 741855 741929 . - . ID=rna-VA249_RS03425;Parent=gene-VA249_RS03425;anticodon=(pos:complement(741895..741897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03425;product=tRNA-Gln NZ_AP024165.1 tRNAscan-SE exon 741855 741929 . - . ID=exon-VA249_RS03425-1;Parent=rna-VA249_RS03425;anticodon=(pos:complement(741895..741897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03425;product=tRNA-Gln NZ_AP024165.1 RefSeq gene 741960 742044 . - . ID=gene-VA249_RS03430;Name=VA249_RS03430;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03430;old_locus_tag=VYA_t00230 NZ_AP024165.1 tRNAscan-SE tRNA 741960 742044 . - . ID=rna-VA249_RS03430;Parent=gene-VA249_RS03430;anticodon=(pos:complement(742008..742010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03430;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 741960 742044 . - . ID=exon-VA249_RS03430-1;Parent=rna-VA249_RS03430;anticodon=(pos:complement(742008..742010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03430;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 742078 742152 . - . ID=gene-VA249_RS03435;Name=VA249_RS03435;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03435;old_locus_tag=VYA_t00240 NZ_AP024165.1 tRNAscan-SE tRNA 742078 742152 . - . ID=rna-VA249_RS03435;Parent=gene-VA249_RS03435;anticodon=(pos:complement(742118..742120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03435;product=tRNA-Gln NZ_AP024165.1 tRNAscan-SE exon 742078 742152 . - . ID=exon-VA249_RS03435-1;Parent=rna-VA249_RS03435;anticodon=(pos:complement(742118..742120));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03435;product=tRNA-Gln NZ_AP024165.1 RefSeq gene 742193 742277 . - . ID=gene-VA249_RS03440;Name=VA249_RS03440;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03440;old_locus_tag=VYA_t00250 NZ_AP024165.1 tRNAscan-SE tRNA 742193 742277 . - . ID=rna-VA249_RS03440;Parent=gene-VA249_RS03440;anticodon=(pos:complement(742241..742243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03440;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 742193 742277 . - . ID=exon-VA249_RS03440-1;Parent=rna-VA249_RS03440;anticodon=(pos:complement(742241..742243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03440;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 742331 742407 . - . ID=gene-VA249_RS03445;Name=VA249_RS03445;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03445;old_locus_tag=VYA_t00260 NZ_AP024165.1 tRNAscan-SE tRNA 742331 742407 . - . ID=rna-VA249_RS03445;Parent=gene-VA249_RS03445;anticodon=(pos:complement(742371..742373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03445;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 742331 742407 . - . ID=exon-VA249_RS03445-1;Parent=rna-VA249_RS03445;anticodon=(pos:complement(742371..742373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03445;product=tRNA-Met NZ_AP024165.1 RefSeq gene 742430 742514 . - . ID=gene-VA249_RS03450;Name=VA249_RS03450;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03450;old_locus_tag=VYA_t00270 NZ_AP024165.1 tRNAscan-SE tRNA 742430 742514 . - . ID=rna-VA249_RS03450;Parent=gene-VA249_RS03450;anticodon=(pos:complement(742478..742480));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03450;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 742430 742514 . - . ID=exon-VA249_RS03450-1;Parent=rna-VA249_RS03450;anticodon=(pos:complement(742478..742480));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03450;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 742580 742654 . - . ID=gene-VA249_RS03455;Name=VA249_RS03455;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03455;old_locus_tag=VYA_t00280 NZ_AP024165.1 tRNAscan-SE tRNA 742580 742654 . - . ID=rna-VA249_RS03455;Parent=gene-VA249_RS03455;anticodon=(pos:complement(742620..742622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03455;product=tRNA-Gln NZ_AP024165.1 tRNAscan-SE exon 742580 742654 . - . ID=exon-VA249_RS03455-1;Parent=rna-VA249_RS03455;anticodon=(pos:complement(742620..742622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03455;product=tRNA-Gln NZ_AP024165.1 RefSeq gene 742685 742769 . - . ID=gene-VA249_RS03460;Name=VA249_RS03460;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03460;old_locus_tag=VYA_t00290 NZ_AP024165.1 tRNAscan-SE tRNA 742685 742769 . - . ID=rna-VA249_RS03460;Parent=gene-VA249_RS03460;anticodon=(pos:complement(742733..742735));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03460;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 742685 742769 . - . ID=exon-VA249_RS03460-1;Parent=rna-VA249_RS03460;anticodon=(pos:complement(742733..742735));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03460;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 742803 742877 . - . ID=gene-VA249_RS03465;Name=VA249_RS03465;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03465;old_locus_tag=VYA_t00300 NZ_AP024165.1 tRNAscan-SE tRNA 742803 742877 . - . ID=rna-VA249_RS03465;Parent=gene-VA249_RS03465;anticodon=(pos:complement(742843..742845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03465;product=tRNA-Gln NZ_AP024165.1 tRNAscan-SE exon 742803 742877 . - . ID=exon-VA249_RS03465-1;Parent=rna-VA249_RS03465;anticodon=(pos:complement(742843..742845));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03465;product=tRNA-Gln NZ_AP024165.1 RefSeq gene 742894 742978 . - . ID=gene-VA249_RS03470;Name=VA249_RS03470;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03470;old_locus_tag=VYA_t00310 NZ_AP024165.1 tRNAscan-SE tRNA 742894 742978 . - . ID=rna-VA249_RS03470;Parent=gene-VA249_RS03470;anticodon=(pos:complement(742942..742944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03470;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 742894 742978 . - . ID=exon-VA249_RS03470-1;Parent=rna-VA249_RS03470;anticodon=(pos:complement(742942..742944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03470;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 743005 743089 . - . ID=gene-VA249_RS03475;Name=VA249_RS03475;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03475;old_locus_tag=VYA_t00320 NZ_AP024165.1 tRNAscan-SE tRNA 743005 743089 . - . ID=rna-VA249_RS03475;Parent=gene-VA249_RS03475;anticodon=(pos:complement(743053..743055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03475;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 743005 743089 . - . ID=exon-VA249_RS03475-1;Parent=rna-VA249_RS03475;anticodon=(pos:complement(743053..743055));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03475;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 743156 743232 . - . ID=gene-VA249_RS03480;Name=VA249_RS03480;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03480;old_locus_tag=VYA_t00330 NZ_AP024165.1 tRNAscan-SE tRNA 743156 743232 . - . ID=rna-VA249_RS03480;Parent=gene-VA249_RS03480;anticodon=(pos:complement(743196..743198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03480;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 743156 743232 . - . ID=exon-VA249_RS03480-1;Parent=rna-VA249_RS03480;anticodon=(pos:complement(743196..743198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03480;product=tRNA-Met NZ_AP024165.1 RefSeq gene 743311 743385 . - . ID=gene-VA249_RS03485;Name=VA249_RS03485;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03485;old_locus_tag=VYA_t00340 NZ_AP024165.1 tRNAscan-SE tRNA 743311 743385 . - . ID=rna-VA249_RS03485;Parent=gene-VA249_RS03485;anticodon=(pos:complement(743351..743353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03485;product=tRNA-Gln NZ_AP024165.1 tRNAscan-SE exon 743311 743385 . - . ID=exon-VA249_RS03485-1;Parent=rna-VA249_RS03485;anticodon=(pos:complement(743351..743353));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03485;product=tRNA-Gln NZ_AP024165.1 RefSeq gene 743417 743501 . - . ID=gene-VA249_RS03490;Name=VA249_RS03490;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03490;old_locus_tag=VYA_t00350 NZ_AP024165.1 tRNAscan-SE tRNA 743417 743501 . - . ID=rna-VA249_RS03490;Parent=gene-VA249_RS03490;anticodon=(pos:complement(743465..743467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03490;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 743417 743501 . - . ID=exon-VA249_RS03490-1;Parent=rna-VA249_RS03490;anticodon=(pos:complement(743465..743467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03490;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 743542 743618 . - . ID=gene-VA249_RS03495;Name=VA249_RS03495;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03495;old_locus_tag=VYA_t00360 NZ_AP024165.1 tRNAscan-SE tRNA 743542 743618 . - . ID=rna-VA249_RS03495;Parent=gene-VA249_RS03495;anticodon=(pos:complement(743582..743584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03495;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 743542 743618 . - . ID=exon-VA249_RS03495-1;Parent=rna-VA249_RS03495;anticodon=(pos:complement(743582..743584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03495;product=tRNA-Met NZ_AP024165.1 RefSeq gene 743902 744993 . - . ID=gene-VA249_RS03500;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=VA249_RS03500;old_locus_tag=VYA_06630 NZ_AP024165.1 Protein Homology CDS 743902 744993 . - 0 ID=cds-WP_128811429.1;Parent=gene-VA249_RS03500;Dbxref=Genbank:WP_128811429.1;Name=WP_128811429.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505887.1;locus_tag=VA249_RS03500;product=redox-regulated ATPase YchF;protein_id=WP_128811429.1;transl_table=11 NZ_AP024165.1 RefSeq gene 745004 745594 . - . ID=gene-VA249_RS03505;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=VA249_RS03505;old_locus_tag=VYA_06640 NZ_AP024165.1 Protein Homology CDS 745004 745594 . - 0 ID=cds-WP_128811428.1;Parent=gene-VA249_RS03505;Dbxref=Genbank:WP_128811428.1;Name=WP_128811428.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017103962.1;locus_tag=VA249_RS03505;product=aminoacyl-tRNA hydrolase;protein_id=WP_128811428.1;transl_table=11 NZ_AP024165.1 RefSeq gene 745806 746750 . - . ID=gene-VA249_RS03510;Name=VA249_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03510;old_locus_tag=VYA_06650 NZ_AP024165.1 Protein Homology CDS 745806 746750 . - 0 ID=cds-WP_005449254.1;Parent=gene-VA249_RS03510;Dbxref=Genbank:WP_005449254.1;Name=WP_005449254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231062.1;locus_tag=VA249_RS03510;product=ribose-phosphate pyrophosphokinase;protein_id=WP_005449254.1;transl_table=11 NZ_AP024165.1 RefSeq gene 746779 747651 . - . ID=gene-VA249_RS03515;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=VA249_RS03515;old_locus_tag=VYA_06660 NZ_AP024165.1 Protein Homology CDS 746779 747651 . - 0 ID=cds-WP_221069795.1;Parent=gene-VA249_RS03515;Dbxref=Genbank:WP_221069795.1;Name=WP_221069795.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333321.1;locus_tag=VA249_RS03515;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_221069795.1;transl_table=11 NZ_AP024165.1 RefSeq gene 747648 748286 . - . ID=gene-VA249_RS03520;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=VA249_RS03520;old_locus_tag=VYA_06670 NZ_AP024165.1 Protein Homology CDS 747648 748286 . - 0 ID=cds-WP_211919850.1;Parent=gene-VA249_RS03520;Dbxref=Genbank:WP_211919850.1;Name=WP_211919850.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819988.1;locus_tag=VA249_RS03520;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_211919850.1;transl_table=11 NZ_AP024165.1 RefSeq gene 748421 749677 . + . ID=gene-VA249_RS03525;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=VA249_RS03525;old_locus_tag=VYA_06680 NZ_AP024165.1 Protein Homology CDS 748421 749677 . + 0 ID=cds-WP_221068931.1;Parent=gene-VA249_RS03525;Dbxref=Genbank:WP_221068931.1;Name=WP_221068931.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650925.1;locus_tag=VA249_RS03525;product=glutamyl-tRNA reductase;protein_id=WP_221068931.1;transl_table=11 NZ_AP024165.1 RefSeq gene 749707 750795 . + . ID=gene-VA249_RS03530;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=VA249_RS03530;old_locus_tag=VYA_06690 NZ_AP024165.1 Protein Homology CDS 749707 750795 . + 0 ID=cds-WP_211919848.1;Parent=gene-VA249_RS03530;Dbxref=Genbank:WP_211919848.1;Name=WP_211919848.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127201.1;locus_tag=VA249_RS03530;product=peptide chain release factor 1;protein_id=WP_211919848.1;transl_table=11 NZ_AP024165.1 RefSeq gene 750799 751659 . + . ID=gene-VA249_RS03535;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=VA249_RS03535;old_locus_tag=VYA_06700 NZ_AP024165.1 Protein Homology CDS 750799 751659 . + 0 ID=cds-WP_211919847.1;Parent=gene-VA249_RS03535;Dbxref=Genbank:WP_211919847.1;Name=WP_211919847.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020198207.1;locus_tag=VA249_RS03535;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_211919847.1;transl_table=11 NZ_AP024165.1 RefSeq gene 751697 752080 . + . ID=gene-VA249_RS03540;Name=VA249_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03540;old_locus_tag=VYA_06710 NZ_AP024165.1 Protein Homology CDS 751697 752080 . + 0 ID=cds-WP_221068933.1;Parent=gene-VA249_RS03540;Dbxref=Genbank:WP_221068933.1;Name=WP_221068933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848726.1;locus_tag=VA249_RS03540;product=SirB2 family protein;protein_id=WP_221068933.1;transl_table=11 NZ_AP024165.1 RefSeq gene 752086 752895 . + . ID=gene-VA249_RS03545;Name=VA249_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03545;old_locus_tag=VYA_06720 NZ_AP024165.1 Protein Homology CDS 752086 752895 . + 0 ID=cds-WP_128811422.1;Parent=gene-VA249_RS03545;Dbxref=Genbank:WP_128811422.1;Name=WP_128811422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736239.1;locus_tag=VA249_RS03545;product=SirB1 family protein;protein_id=WP_128811422.1;transl_table=11 NZ_AP024165.1 RefSeq gene 752951 753802 . + . ID=gene-VA249_RS03550;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=VA249_RS03550;old_locus_tag=VYA_06730 NZ_AP024165.1 Protein Homology CDS 752951 753802 . + 0 ID=cds-WP_005438608.1;Parent=gene-VA249_RS03550;Dbxref=Genbank:WP_005438608.1;Name=WP_005438608.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650917.1;locus_tag=VA249_RS03550;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_005438608.1;transl_table=11 NZ_AP024165.1 RefSeq gene 754128 755789 . + . ID=gene-VA249_RS03555;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=VA249_RS03555;old_locus_tag=VYA_06740 NZ_AP024165.1 Protein Homology CDS 754128 755789 . + 0 ID=cds-WP_221068935.1;Parent=gene-VA249_RS03555;Dbxref=Genbank:WP_221068935.1;Name=WP_221068935.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844192.1;locus_tag=VA249_RS03555;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_221068935.1;transl_table=11 NZ_AP024165.1 RefSeq gene 755899 756372 . + . ID=gene-VA249_RS03560;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=VA249_RS03560;old_locus_tag=VYA_06750 NZ_AP024165.1 Protein Homology CDS 755899 756372 . + 0 ID=cds-WP_221068937.1;Parent=gene-VA249_RS03560;Dbxref=Genbank:WP_221068937.1;Name=WP_221068937.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005481362.1;locus_tag=VA249_RS03560;product=Cys-tRNA(Pro) deacylase;protein_id=WP_221068937.1;transl_table=11 NZ_AP024165.1 RefSeq gene 756436 757542 . - . ID=gene-VA249_RS03565;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=VA249_RS03565;old_locus_tag=VYA_06760 NZ_AP024165.1 Protein Homology CDS 756436 757542 . - 0 ID=cds-WP_221068939.1;Parent=gene-VA249_RS03565;Dbxref=Genbank:WP_221068939.1;Name=WP_221068939.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438611.1;locus_tag=VA249_RS03565;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_221068939.1;transl_table=11 NZ_AP024165.1 RefSeq gene 757645 758226 . - . ID=gene-VA249_RS03570;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=VA249_RS03570;old_locus_tag=VYA_06770 NZ_AP024165.1 Protein Homology CDS 757645 758226 . - 0 ID=cds-WP_221068940.1;Parent=gene-VA249_RS03570;Dbxref=Genbank:WP_221068940.1;Name=WP_221068940.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020198126.1;locus_tag=VA249_RS03570;product=DNA endonuclease SmrA;protein_id=WP_221068940.1;transl_table=11 NZ_AP024165.1 RefSeq gene 758358 758498 . - . ID=gene-VA249_RS03575;Name=VA249_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03575 NZ_AP024165.1 Protein Homology CDS 758358 758498 . - 0 ID=cds-WP_128811417.1;Parent=gene-VA249_RS03575;Dbxref=Genbank:WP_128811417.1;Name=WP_128811417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017054223.1;locus_tag=VA249_RS03575;product=DUF3149 domain-containing protein;protein_id=WP_128811417.1;transl_table=11 NZ_AP024165.1 RefSeq gene 758759 758835 . + . ID=gene-VA249_RS03580;Name=VA249_RS03580;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03580;old_locus_tag=VYA_t00370 NZ_AP024165.1 tRNAscan-SE tRNA 758759 758835 . + . ID=rna-VA249_RS03580;Parent=gene-VA249_RS03580;anticodon=(pos:758793..758795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03580;product=tRNA-Pro NZ_AP024165.1 tRNAscan-SE exon 758759 758835 . + . ID=exon-VA249_RS03580-1;Parent=rna-VA249_RS03580;anticodon=(pos:758793..758795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03580;product=tRNA-Pro NZ_AP024165.1 RefSeq gene 759068 760504 . + . ID=gene-VA249_RS03585;Name=VA249_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03585;old_locus_tag=VYA_06780 NZ_AP024165.1 Protein Homology CDS 759068 760504 . + 0 ID=cds-WP_221067583.1-3;Parent=gene-VA249_RS03585;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS03585;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 760742 761614 . - . ID=gene-VA249_RS03590;Name=VA249_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03590;old_locus_tag=VYA_06790 NZ_AP024165.1 Protein Homology CDS 760742 761614 . - 0 ID=cds-WP_221068941.1;Parent=gene-VA249_RS03590;Dbxref=Genbank:WP_221068941.1;Name=WP_221068941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425598.1;locus_tag=VA249_RS03590;product=TraB/GumN family protein;protein_id=WP_221068941.1;transl_table=11 NZ_AP024165.1 RefSeq gene 762073 764724 . + . ID=gene-VA249_RS03595;Name=VA249_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03595;old_locus_tag=VYA_06800 NZ_AP024165.1 Protein Homology CDS 762073 764724 . + 0 ID=cds-WP_221068944.1;Parent=gene-VA249_RS03595;Dbxref=Genbank:WP_221068944.1;Name=WP_221068944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453978.1;locus_tag=VA249_RS03595;product=carbohydate-binding domain-containing protein;protein_id=WP_221068944.1;transl_table=11 NZ_AP024165.1 RefSeq gene 765190 765852 . + . ID=gene-VA249_RS03600;Name=VA249_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03600;old_locus_tag=VYA_06810 NZ_AP024165.1 Protein Homology CDS 765190 765852 . + 0 ID=cds-WP_211919841.1;Parent=gene-VA249_RS03600;Dbxref=Genbank:WP_211919841.1;Name=WP_211919841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438618.1;locus_tag=VA249_RS03600;product=porin;protein_id=WP_211919841.1;transl_table=11 NZ_AP024165.1 RefSeq gene 766135 766365 . - . ID=gene-VA249_RS03605;Name=VA249_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03605;old_locus_tag=VYA_06820 NZ_AP024165.1 Protein Homology CDS 766135 766365 . - 0 ID=cds-WP_128811414.1;Parent=gene-VA249_RS03605;Dbxref=Genbank:WP_128811414.1;Name=WP_128811414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649632.1;locus_tag=VA249_RS03605;product=PAS factor family protein;protein_id=WP_128811414.1;transl_table=11 NZ_AP024165.1 RefSeq gene 766527 766976 . - . ID=gene-VA249_RS03610;Name=VA249_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03610;old_locus_tag=VYA_06830 NZ_AP024165.1 Protein Homology CDS 766527 766976 . - 0 ID=cds-WP_128811413.1;Parent=gene-VA249_RS03610;Dbxref=Genbank:WP_128811413.1;Name=WP_128811413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705665.1;locus_tag=VA249_RS03610;product=DUF411 domain-containing protein;protein_id=WP_128811413.1;transl_table=11 NZ_AP024165.1 RefSeq gene 767001 769697 . - . ID=gene-VA249_RS03615;Name=VA249_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03615;old_locus_tag=VYA_06840 NZ_AP024165.1 Protein Homology CDS 767001 769697 . - 0 ID=cds-WP_221068947.1;Parent=gene-VA249_RS03615;Dbxref=Genbank:WP_221068947.1;Name=WP_221068947.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438623.1;locus_tag=VA249_RS03615;product=heavy metal translocating P-type ATPase;protein_id=WP_221068947.1;transl_table=11 NZ_AP024165.1 RefSeq gene 769982 771406 . + . ID=gene-VA249_RS03620;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=VA249_RS03620;old_locus_tag=VYA_06850 NZ_AP024165.1 Protein Homology CDS 769982 771406 . + 0 ID=cds-WP_128811412.1;Parent=gene-VA249_RS03620;Dbxref=Genbank:WP_128811412.1;Name=WP_128811412.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012550846.1;locus_tag=VA249_RS03620;product=glutamate--tRNA ligase;protein_id=WP_128811412.1;transl_table=11 NZ_AP024165.1 RefSeq gene 771972 772928 . + . ID=gene-VA249_RS03625;Name=VA249_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03625;old_locus_tag=VYA_06860 NZ_AP024165.1 Protein Homology CDS 771972 772928 . + 0 ID=cds-WP_221068949.1;Parent=gene-VA249_RS03625;Dbxref=Genbank:WP_221068949.1;Name=WP_221068949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650759.1;locus_tag=VA249_RS03625;product=OmpA family protein;protein_id=WP_221068949.1;transl_table=11 NZ_AP024165.1 RefSeq gene 773095 773601 . - . ID=gene-VA249_RS03630;Name=VA249_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03630;old_locus_tag=VYA_06870 NZ_AP024165.1 Protein Homology CDS 773095 773601 . - 0 ID=cds-WP_164837212.1;Parent=gene-VA249_RS03630;Dbxref=Genbank:WP_164837212.1;Name=WP_164837212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045927.1;locus_tag=VA249_RS03630;product=Fe3+-citrate ABC transporter substrate-binding protein;protein_id=WP_164837212.1;transl_table=11 NZ_AP024165.1 RefSeq gene 773905 773981 . - . ID=gene-VA249_RS03635;Name=VA249_RS03635;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS03635;old_locus_tag=VYA_t00380 NZ_AP024165.1 tRNAscan-SE tRNA 773905 773981 . - . ID=rna-VA249_RS03635;Parent=gene-VA249_RS03635;anticodon=(pos:complement(773945..773947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03635;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 773905 773981 . - . ID=exon-VA249_RS03635-1;Parent=rna-VA249_RS03635;anticodon=(pos:complement(773945..773947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS03635;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 774180 775316 . - . ID=gene-VA249_RS03640;Name=VA249_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03640;old_locus_tag=VYA_06880 NZ_AP024165.1 Protein Homology CDS 774180 775316 . - 0 ID=cds-WP_221068951.1;Parent=gene-VA249_RS03640;Dbxref=Genbank:WP_221068951.1;Name=WP_221068951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449218.1;locus_tag=VA249_RS03640;product=flagellar assembly protein T N-terminal domain-containing protein;protein_id=WP_221068951.1;transl_table=11 NZ_AP024165.1 RefSeq gene 775489 776127 . + . ID=gene-VA249_RS03645;Name=VA249_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03645;old_locus_tag=VYA_06890 NZ_AP024165.1 Protein Homology CDS 775489 776127 . + 0 ID=cds-WP_128811409.1;Parent=gene-VA249_RS03645;Dbxref=Genbank:WP_128811409.1;Name=WP_128811409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017064137.1;locus_tag=VA249_RS03645;product=FlgO family outer membrane protein;protein_id=WP_128811409.1;transl_table=11 NZ_AP024165.1 RefSeq gene 776137 776568 . + . ID=gene-VA249_RS03650;Name=flgP;gbkey=Gene;gene=flgP;gene_biotype=protein_coding;locus_tag=VA249_RS03650;old_locus_tag=VYA_06900 NZ_AP024165.1 Protein Homology CDS 776137 776568 . + 0 ID=cds-WP_128811408.1;Parent=gene-VA249_RS03650;Dbxref=Genbank:WP_128811408.1;Name=WP_128811408.1;gbkey=CDS;gene=flgP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736169.1;locus_tag=VA249_RS03650;product=flagellar assembly lipoprotein FlgP;protein_id=WP_128811408.1;transl_table=11 NZ_AP024165.1 RefSeq gene 776846 777271 . - . ID=gene-VA249_RS03655;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=VA249_RS03655;old_locus_tag=VYA_06910 NZ_AP024165.1 Protein Homology CDS 776846 777271 . - 0 ID=cds-WP_128811407.1;Parent=gene-VA249_RS03655;Dbxref=Genbank:WP_128811407.1;Name=WP_128811407.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454011.1;locus_tag=VA249_RS03655;product=flagellar export chaperone FlgN;protein_id=WP_128811407.1;transl_table=11 NZ_AP024165.1 RefSeq gene 777298 777612 . - . ID=gene-VA249_RS03660;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=VA249_RS03660;old_locus_tag=VYA_06920 NZ_AP024165.1 Protein Homology CDS 777298 777612 . - 0 ID=cds-WP_221068962.1;Parent=gene-VA249_RS03660;Dbxref=Genbank:WP_221068962.1;Name=WP_221068962.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005382018.1;locus_tag=VA249_RS03660;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_221068962.1;transl_table=11 NZ_AP024165.1 RefSeq gene 777750 778496 . - . ID=gene-VA249_RS03665;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=VA249_RS03665;old_locus_tag=VYA_06930 NZ_AP024165.1 Protein Homology CDS 777750 778496 . - 0 ID=cds-WP_221068964.1;Parent=gene-VA249_RS03665;Dbxref=Genbank:WP_221068964.1;Name=WP_221068964.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438643.1;locus_tag=VA249_RS03665;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_221068964.1;transl_table=11 NZ_AP024165.1 RefSeq gene 778573 779499 . + . ID=gene-VA249_RS03670;Name=VA249_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03670;old_locus_tag=VYA_06940 NZ_AP024165.1 Protein Homology CDS 778573 779499 . + 0 ID=cds-WP_221068966.1;Parent=gene-VA249_RS03670;Dbxref=Genbank:WP_221068966.1;Name=WP_221068966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650749.1;locus_tag=VA249_RS03670;product=chemotaxis protein CheV;protein_id=WP_221068966.1;transl_table=11 NZ_AP024165.1 RefSeq gene 779511 780338 . + . ID=gene-VA249_RS03675;Name=VA249_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03675;old_locus_tag=VYA_06950 NZ_AP024165.1 Protein Homology CDS 779511 780338 . + 0 ID=cds-WP_221068967.1;Parent=gene-VA249_RS03675;Dbxref=Genbank:WP_221068967.1;Name=WP_221068967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125384.1;locus_tag=VA249_RS03675;product=protein-glutamate O-methyltransferase;protein_id=WP_221068967.1;transl_table=11 NZ_AP024165.1 RefSeq gene 780772 781167 . + . ID=gene-VA249_RS03680;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=VA249_RS03680;old_locus_tag=VYA_06960 NZ_AP024165.1 Protein Homology CDS 780772 781167 . + 0 ID=cds-WP_128811402.1;Parent=gene-VA249_RS03680;Dbxref=Genbank:WP_128811402.1;Name=WP_128811402.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007975.1;locus_tag=VA249_RS03680;product=flagellar basal body rod protein FlgB;protein_id=WP_128811402.1;transl_table=11 NZ_AP024165.1 RefSeq gene 781173 781586 . + . ID=gene-VA249_RS03685;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=VA249_RS03685;old_locus_tag=VYA_06970 NZ_AP024165.1 Protein Homology CDS 781173 781586 . + 0 ID=cds-WP_128811401.1;Parent=gene-VA249_RS03685;Dbxref=Genbank:WP_128811401.1;Name=WP_128811401.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051919.1;locus_tag=VA249_RS03685;product=flagellar basal body rod protein FlgC;protein_id=WP_128811401.1;transl_table=11 NZ_AP024165.1 RefSeq gene 781604 782311 . + . ID=gene-VA249_RS03690;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=VA249_RS03690;old_locus_tag=VYA_06980 NZ_AP024165.1 Protein Homology CDS 781604 782311 . + 0 ID=cds-WP_128811400.1;Parent=gene-VA249_RS03690;Dbxref=Genbank:WP_128811400.1;Name=WP_128811400.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907399.1;locus_tag=VA249_RS03690;product=flagellar hook assembly protein FlgD;protein_id=WP_128811400.1;transl_table=11 NZ_AP024165.1 RefSeq gene 782343 783656 . + . ID=gene-VA249_RS03695;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=VA249_RS03695;old_locus_tag=VYA_06990 NZ_AP024165.1 Protein Homology CDS 782343 783656 . + 0 ID=cds-WP_221068969.1;Parent=gene-VA249_RS03695;Dbxref=Genbank:WP_221068969.1;Name=WP_221068969.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120469.1;locus_tag=VA249_RS03695;product=flagellar hook protein FlgE;protein_id=WP_221068969.1;transl_table=11 NZ_AP024165.1 RefSeq gene 783963 784712 . + . ID=gene-VA249_RS03700;Name=VA249_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03700;old_locus_tag=VYA_07000 NZ_AP024165.1 Protein Homology CDS 783963 784712 . + 0 ID=cds-WP_128811398.1;Parent=gene-VA249_RS03700;Dbxref=Genbank:WP_128811398.1;Name=WP_128811398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449199.1;locus_tag=VA249_RS03700;product=flagellar basal body rod protein FlgF;protein_id=WP_128811398.1;transl_table=11 NZ_AP024165.1 RefSeq gene 784731 785519 . + . ID=gene-VA249_RS03705;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=VA249_RS03705;old_locus_tag=VYA_07010 NZ_AP024165.1 Protein Homology CDS 784731 785519 . + 0 ID=cds-WP_211919828.1;Parent=gene-VA249_RS03705;Dbxref=Genbank:WP_211919828.1;Name=WP_211919828.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019829711.1;locus_tag=VA249_RS03705;product=flagellar basal-body rod protein FlgG;protein_id=WP_211919828.1;transl_table=11 NZ_AP024165.1 RefSeq gene 785544 786323 . + . ID=gene-VA249_RS03710;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=VA249_RS03710;old_locus_tag=VYA_07020 NZ_AP024165.1 Protein Homology CDS 785544 786323 . + 0 ID=cds-WP_221069797.1;Parent=gene-VA249_RS03710;Dbxref=Genbank:WP_221069797.1;Name=WP_221069797.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017056856.1;locus_tag=VA249_RS03710;product=flagellar basal body L-ring protein FlgH;protein_id=WP_221069797.1;transl_table=11 NZ_AP024165.1 RefSeq gene 786367 787458 . + . ID=gene-VA249_RS03715;Name=VA249_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03715;old_locus_tag=VYA_07030 NZ_AP024165.1 Protein Homology CDS 786367 787458 . + 0 ID=cds-WP_221068971.1;Parent=gene-VA249_RS03715;Dbxref=Genbank:WP_221068971.1;Name=WP_221068971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743028.1;locus_tag=VA249_RS03715;product=flagellar basal body P-ring protein FlgI;protein_id=WP_221068971.1;transl_table=11 NZ_AP024165.1 RefSeq gene 787477 788424 . + . ID=gene-VA249_RS03720;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=VA249_RS03720;old_locus_tag=VYA_07040 NZ_AP024165.1 Protein Homology CDS 787477 788424 . + 0 ID=cds-WP_221068973.1;Parent=gene-VA249_RS03720;Dbxref=Genbank:WP_221068973.1;Name=WP_221068973.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536373.1;locus_tag=VA249_RS03720;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_221068973.1;transl_table=11 NZ_AP024165.1 RefSeq gene 788590 790506 . + . ID=gene-VA249_RS03725;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=VA249_RS03725;old_locus_tag=VYA_07050 NZ_AP024165.1 Protein Homology CDS 788590 790506 . + 0 ID=cds-WP_221068983.1;Parent=gene-VA249_RS03725;Dbxref=Genbank:WP_221068983.1;Name=WP_221068983.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004739702.1;locus_tag=VA249_RS03725;product=flagellar hook-associated protein FlgK;protein_id=WP_221068983.1;transl_table=11 NZ_AP024165.1 RefSeq gene 790519 791709 . + . ID=gene-VA249_RS03730;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=VA249_RS03730;old_locus_tag=VYA_07060 NZ_AP024165.1 Protein Homology CDS 790519 791709 . + 0 ID=cds-WP_211919824.1;Parent=gene-VA249_RS03730;Dbxref=Genbank:WP_211919824.1;Name=WP_211919824.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736186.1;locus_tag=VA249_RS03730;product=flagellar hook-associated protein FlgL;protein_id=WP_211919824.1;transl_table=11 NZ_AP024165.1 RefSeq gene 792246 793400 . + . ID=gene-VA249_RS03735;Name=VA249_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03735;old_locus_tag=VYA_07070 NZ_AP024165.1 Protein Homology CDS 792246 793400 . + 0 ID=cds-WP_211919823.1;Parent=gene-VA249_RS03735;Dbxref=Genbank:WP_211919823.1;Name=WP_211919823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017045944.1;locus_tag=VA249_RS03735;product=flagellin;protein_id=WP_211919823.1;transl_table=11 NZ_AP024165.1 RefSeq gene 793961 795094 . + . ID=gene-VA249_RS03740;Name=VA249_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03740;old_locus_tag=VYA_07080 NZ_AP024165.1 Protein Homology CDS 793961 795094 . + 0 ID=cds-WP_128810423.1;Parent=gene-VA249_RS03740;Dbxref=Genbank:WP_128810423.1;Name=WP_128810423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017053294.1;locus_tag=VA249_RS03740;product=flagellin;protein_id=WP_128810423.1;transl_table=11 NZ_AP024165.1 RefSeq gene 795302 795811 . - . ID=gene-VA249_RS03745;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=VA249_RS03745;old_locus_tag=VYA_07090 NZ_AP024165.1 Protein Homology CDS 795302 795811 . - 0 ID=cds-WP_005425608.1;Parent=gene-VA249_RS03745;Dbxref=Genbank:WP_005425608.1;Name=WP_005425608.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=VA249_RS03745;product=PTS glucose transporter subunit IIA;protein_id=WP_005425608.1;transl_table=11 NZ_AP024165.1 RefSeq gene 795917 797641 . - . ID=gene-VA249_RS03750;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=VA249_RS03750;old_locus_tag=VYA_07100 NZ_AP024165.1 Protein Homology CDS 795917 797641 . - 0 ID=cds-WP_221068984.1;Parent=gene-VA249_RS03750;Dbxref=Genbank:WP_221068984.1;Name=WP_221068984.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634829.1;locus_tag=VA249_RS03750;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_221068984.1;transl_table=11 NZ_AP024165.1 RefSeq gene 797782 798039 . - . ID=gene-VA249_RS03755;Name=VA249_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03755;old_locus_tag=VYA_07110 NZ_AP024165.1 Protein Homology CDS 797782 798039 . - 0 ID=cds-WP_099079289.1;Parent=gene-VA249_RS03755;Dbxref=Genbank:WP_099079289.1;Name=WP_099079289.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004415108.1;locus_tag=VA249_RS03755;product=HPr family phosphocarrier protein;protein_id=WP_099079289.1;transl_table=11 NZ_AP024165.1 RefSeq gene 798336 799304 . - . ID=gene-VA249_RS03760;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=VA249_RS03760;old_locus_tag=VYA_07120 NZ_AP024165.1 Protein Homology CDS 798336 799304 . - 0 ID=cds-WP_221068986.1;Parent=gene-VA249_RS03760;Dbxref=Genbank:WP_221068986.1;Name=WP_221068986.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006711304.1;locus_tag=VA249_RS03760;product=cysteine synthase A;protein_id=WP_221068986.1;transl_table=11 NZ_AP024165.1 RefSeq gene 799468 800211 . - . ID=gene-VA249_RS03765;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=VA249_RS03765;old_locus_tag=VYA_07130 NZ_AP024165.1 Protein Homology CDS 799468 800211 . - 0 ID=cds-WP_221068995.1;Parent=gene-VA249_RS03765;Dbxref=Genbank:WP_221068995.1;Name=WP_221068995.1;Ontology_term=GO:0000103,GO:0015116,GO:0005887;gbkey=CDS;gene=cysZ;go_component=integral component of plasma membrane|0005887||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451544.1;locus_tag=VA249_RS03765;product=sulfate transporter CysZ;protein_id=WP_221068995.1;transl_table=11 NZ_AP024165.1 RefSeq gene 800462 801454 . + . ID=gene-VA249_RS03770;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=VA249_RS03770;old_locus_tag=VYA_07140 NZ_AP024165.1 Protein Homology CDS 800462 801454 . + 0 ID=cds-WP_221068997.1;Parent=gene-VA249_RS03770;Dbxref=Genbank:WP_221068997.1;Name=WP_221068997.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534665.1;locus_tag=VA249_RS03770;product=cell division protein ZipA;protein_id=WP_221068997.1;transl_table=11 NZ_AP024165.1 RefSeq gene 801543 803555 . + . ID=gene-VA249_RS03775;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=VA249_RS03775;old_locus_tag=VYA_07150 NZ_AP024165.1 Protein Homology CDS 801543 803555 . + 0 ID=cds-WP_221068999.1;Parent=gene-VA249_RS03775;Dbxref=Genbank:WP_221068999.1;Name=WP_221068999.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446731.1;locus_tag=VA249_RS03775;product=NAD-dependent DNA ligase LigA;protein_id=WP_221068999.1;transl_table=11 NZ_AP024165.1 RefSeq gene 804067 805500 . + . ID=gene-VA249_RS03780;Name=VA249_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03780;old_locus_tag=VYA_07170 NZ_AP024165.1 Protein Homology CDS 804067 805500 . + 0 ID=cds-WP_221069001.1;Parent=gene-VA249_RS03780;Dbxref=Genbank:WP_221069001.1;Name=WP_221069001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643340.1;locus_tag=VA249_RS03780;product=multidrug transporter;protein_id=WP_221069001.1;transl_table=11 NZ_AP024165.1 RefSeq gene 805581 805943 . + . ID=gene-VA249_RS03785;Name=VA249_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03785;old_locus_tag=VYA_07180 NZ_AP024165.1 Protein Homology CDS 805581 805943 . + 0 ID=cds-WP_221069002.1;Parent=gene-VA249_RS03785;Dbxref=Genbank:WP_221069002.1;Name=WP_221069002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436645.1;locus_tag=VA249_RS03785;product=DUF2799 domain-containing protein;protein_id=WP_221069002.1;transl_table=11 NZ_AP024165.1 RefSeq gene 806030 806206 . - . ID=gene-VA249_RS03790;Name=VA249_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03790;old_locus_tag=VYA_07190 NZ_AP024165.1 Protein Homology CDS 806030 806206 . - 0 ID=cds-WP_221069004.1;Parent=gene-VA249_RS03790;Dbxref=Genbank:WP_221069004.1;Name=WP_221069004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534657.1;locus_tag=VA249_RS03790;product=hypothetical protein;protein_id=WP_221069004.1;transl_table=11 NZ_AP024165.1 RefSeq gene 806810 807265 . - . ID=gene-VA249_RS03795;Name=VA249_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03795;old_locus_tag=VYA_07200 NZ_AP024165.1 Protein Homology CDS 806810 807265 . - 0 ID=cds-WP_221069005.1;Parent=gene-VA249_RS03795;Dbxref=Genbank:WP_221069005.1;Name=WP_221069005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446737.1;locus_tag=VA249_RS03795;product=NfeD family protein;protein_id=WP_221069005.1;transl_table=11 NZ_AP024165.1 RefSeq gene 807265 808179 . - . ID=gene-VA249_RS03800;Name=VA249_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03800;old_locus_tag=VYA_07210 NZ_AP024165.1 Protein Homology CDS 807265 808179 . - 0 ID=cds-WP_221069006.1;Parent=gene-VA249_RS03800;Dbxref=Genbank:WP_221069006.1;Name=WP_221069006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436910.1;locus_tag=VA249_RS03800;product=SPFH/Band 7/PHB domain protein;protein_id=WP_221069006.1;transl_table=11 NZ_AP024165.1 RefSeq gene 808347 809201 . - . ID=gene-VA249_RS03805;Name=VA249_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03805;old_locus_tag=VYA_07220 NZ_AP024165.1 Protein Homology CDS 808347 809201 . - 0 ID=cds-WP_221069007.1;Parent=gene-VA249_RS03805;Dbxref=Genbank:WP_221069007.1;Name=WP_221069007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448757.1;locus_tag=VA249_RS03805;product=co-chaperone YbbN;protein_id=WP_221069007.1;transl_table=11 NZ_AP024165.1 RefSeq gene 809682 810509 . - . ID=gene-VA249_RS03810;Name=VA249_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03810;old_locus_tag=VYA_07230 NZ_AP024165.1 Protein Homology CDS 809682 810509 . - 0 ID=cds-WP_221069008.1;Parent=gene-VA249_RS03810;Dbxref=Genbank:WP_221069008.1;Name=WP_221069008.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436659.1;locus_tag=VA249_RS03810;product=SDR family oxidoreductase;protein_id=WP_221069008.1;transl_table=11 NZ_AP024165.1 RefSeq gene 810547 811464 . - . ID=gene-VA249_RS03815;Name=VA249_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03815;old_locus_tag=VYA_07240 NZ_AP024165.1 Protein Homology CDS 810547 811464 . - 0 ID=cds-WP_221069009.1;Parent=gene-VA249_RS03815;Dbxref=Genbank:WP_221069009.1;Name=WP_221069009.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451554.1;locus_tag=VA249_RS03815;product=TIGR01777 family oxidoreductase;protein_id=WP_221069009.1;transl_table=11 NZ_AP024165.1 RefSeq gene 811865 812074 . + . ID=gene-VA249_RS24020;Name=VA249_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24020;old_locus_tag=VYA_07250 NZ_AP024165.1 Protein Homology CDS 811865 812074 . + 0 ID=cds-WP_225927099.1;Parent=gene-VA249_RS24020;Dbxref=Genbank:WP_225927099.1;Name=WP_225927099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231120.1;locus_tag=VA249_RS24020;product=hypothetical protein;protein_id=WP_225927099.1;transl_table=11 NZ_AP024165.1 RefSeq gene 812230 812775 . + . ID=gene-VA249_RS03820;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=VA249_RS03820;old_locus_tag=VYA_07260 NZ_AP024165.1 Protein Homology CDS 812230 812775 . + 0 ID=cds-WP_221069010.1;Parent=gene-VA249_RS03820;Dbxref=Genbank:WP_221069010.1;Name=WP_221069010.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448754.1;locus_tag=VA249_RS03820;product=phosphodiesterase;protein_id=WP_221069010.1;transl_table=11 NZ_AP024165.1 RefSeq gene 812818 813096 . - . ID=gene-VA249_RS03825;Name=VA249_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03825;old_locus_tag=VYA_07270 NZ_AP024165.1 Protein Homology CDS 812818 813096 . - 0 ID=cds-WP_211919810.1;Parent=gene-VA249_RS03825;Dbxref=Genbank:WP_211919810.1;Name=WP_211919810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446375.1;locus_tag=VA249_RS03825;product=SelT/SelW/SelH family protein;protein_id=WP_211919810.1;transl_table=11 NZ_AP024165.1 RefSeq gene 813163 813918 . - . ID=gene-VA249_RS03830;Name=VA249_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03830;old_locus_tag=VYA_07280 NZ_AP024165.1 Protein Homology CDS 813163 813918 . - 0 ID=cds-WP_221069011.1;Parent=gene-VA249_RS03830;Dbxref=Genbank:WP_221069011.1;Name=WP_221069011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446376.1;locus_tag=VA249_RS03830;product=sulfite exporter TauE/SafE family protein;protein_id=WP_221069011.1;transl_table=11 NZ_AP024165.1 RefSeq gene 813966 814487 . - . ID=gene-VA249_RS03835;Name=VA249_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03835;old_locus_tag=VYA_07290 NZ_AP024165.1 Protein Homology CDS 813966 814487 . - 0 ID=cds-WP_128811375.1;Parent=gene-VA249_RS03835;Dbxref=Genbank:WP_128811375.1;Name=WP_128811375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454545.1;locus_tag=VA249_RS03835;product=regulatory protein ToxS;protein_id=WP_128811375.1;transl_table=11 NZ_AP024165.1 RefSeq gene 814499 815368 . - . ID=gene-VA249_RS03840;Name=VA249_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03840;old_locus_tag=VYA_07300 NZ_AP024165.1 Protein Homology CDS 814499 815368 . - 0 ID=cds-WP_221069013.1;Parent=gene-VA249_RS03840;Dbxref=Genbank:WP_221069013.1;Name=WP_221069013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127248.1;locus_tag=VA249_RS03840;product=transcriptional regulator;protein_id=WP_221069013.1;transl_table=11 NZ_AP024165.1 RefSeq gene 815639 817543 . + . ID=gene-VA249_RS03845;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=VA249_RS03845;old_locus_tag=VYA_07310 NZ_AP024165.1 Protein Homology CDS 815639 817543 . + 0 ID=cds-WP_221069015.1;Parent=gene-VA249_RS03845;Dbxref=Genbank:WP_221069015.1;Name=WP_221069015.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634818.1;locus_tag=VA249_RS03845;product=molecular chaperone HtpG;protein_id=WP_221069015.1;transl_table=11 NZ_AP024165.1 RefSeq gene 817863 818507 . + . ID=gene-VA249_RS03850;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=VA249_RS03850;old_locus_tag=VYA_07320 NZ_AP024165.1 Protein Homology CDS 817863 818507 . + 0 ID=cds-WP_128811372.1;Parent=gene-VA249_RS03850;Dbxref=Genbank:WP_128811372.1;Name=WP_128811372.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020327968.1;locus_tag=VA249_RS03850;product=adenylate kinase;protein_id=WP_128811372.1;transl_table=11 NZ_AP024165.1 RefSeq gene 818647 819609 . + . ID=gene-VA249_RS03855;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=VA249_RS03855;old_locus_tag=VYA_07330 NZ_AP024165.1 Protein Homology CDS 818647 819609 . + 0 ID=cds-WP_221069017.1;Parent=gene-VA249_RS03855;Dbxref=Genbank:WP_221069017.1;Name=WP_221069017.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818948.1;locus_tag=VA249_RS03855;product=ferrochelatase;protein_id=WP_221069017.1;transl_table=11 NZ_AP024165.1 RefSeq gene 819729 821117 . - . ID=gene-VA249_RS03860;Name=VA249_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03860;old_locus_tag=VYA_07340 NZ_AP024165.1 Protein Homology CDS 819729 821117 . - 0 ID=cds-WP_221069019.1;Parent=gene-VA249_RS03860;Dbxref=Genbank:WP_221069019.1;Name=WP_221069019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843218.1;locus_tag=VA249_RS03860;product=peptide MFS transporter;protein_id=WP_221069019.1;transl_table=11 NZ_AP024165.1 RefSeq gene 821449 821949 . + . ID=gene-VA249_RS03865;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=VA249_RS03865;old_locus_tag=VYA_07350 NZ_AP024165.1 Protein Homology CDS 821449 821949 . + 0 ID=cds-WP_221069021.1;Parent=gene-VA249_RS03865;Dbxref=Genbank:WP_221069021.1;Name=WP_221069021.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535203.1;locus_tag=VA249_RS03865;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_221069021.1;transl_table=11 NZ_AP024165.1 RefSeq gene 822103 823767 . - . ID=gene-VA249_RS03870;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=VA249_RS03870;old_locus_tag=VYA_07360 NZ_AP024165.1 Protein Homology CDS 822103 823767 . - 0 ID=cds-WP_221069024.1;Parent=gene-VA249_RS03870;Dbxref=Genbank:WP_221069024.1;Name=WP_221069024.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006071905.1;locus_tag=VA249_RS03870;product=asparagine synthase B;protein_id=WP_221069024.1;transl_table=11 NZ_AP024165.1 RefSeq gene 823998 825587 . - . ID=gene-VA249_RS03875;Name=VA249_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03875;old_locus_tag=VYA_07370 NZ_AP024165.1 Protein Homology CDS 823998 825587 . - 0 ID=cds-WP_221069026.1;Parent=gene-VA249_RS03875;Dbxref=Genbank:WP_221069026.1;Name=WP_221069026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127252.1;locus_tag=VA249_RS03875;product=cation:proton antiporter;protein_id=WP_221069026.1;transl_table=11 NZ_AP024165.1 RefSeq gene 825668 826882 . - . ID=gene-VA249_RS03880;Name=VA249_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03880;old_locus_tag=VYA_07380 NZ_AP024165.1 Protein Homology CDS 825668 826882 . - 0 ID=cds-WP_221069028.1;Parent=gene-VA249_RS03880;Dbxref=Genbank:WP_221069028.1;Name=WP_221069028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001013118.1;locus_tag=VA249_RS03880;product=ROK family transcriptional regulator;protein_id=WP_221069028.1;transl_table=11 NZ_AP024165.1 RefSeq gene 826885 828021 . - . ID=gene-VA249_RS03885;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=VA249_RS03885;old_locus_tag=VYA_07390 NZ_AP024165.1 Protein Homology CDS 826885 828021 . - 0 ID=cds-WP_221069030.1;Parent=gene-VA249_RS03885;Dbxref=Genbank:WP_221069030.1;Name=WP_221069030.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436732.1;locus_tag=VA249_RS03885;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_221069030.1;transl_table=11 NZ_AP024165.1 RefSeq gene 828512 830086 . + . ID=gene-VA249_RS03890;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=VA249_RS03890;old_locus_tag=VYA_07400 NZ_AP024165.1 Protein Homology CDS 828512 830086 . + 0 ID=cds-WP_128811365.1;Parent=gene-VA249_RS03890;Dbxref=Genbank:WP_128811365.1;Name=WP_128811365.1;Ontology_term=GO:0015572;gbkey=CDS;gene=nagE;go_function=N-acetylglucosamine transmembrane transporter activity|0015572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002043566.1;locus_tag=VA249_RS03890;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_128811365.1;transl_table=11 NZ_AP024165.1 RefSeq gene 830321 831991 . + . ID=gene-VA249_RS03895;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=VA249_RS03895;old_locus_tag=VYA_07410 NZ_AP024165.1 Protein Homology CDS 830321 831991 . + 0 ID=cds-WP_128811364.1;Parent=gene-VA249_RS03895;Dbxref=Genbank:WP_128811364.1;Name=WP_128811364.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643299.1;locus_tag=VA249_RS03895;product=glutamine--tRNA ligase;protein_id=WP_128811364.1;transl_table=11 NZ_AP024165.1 RefSeq gene 832119 832568 . - . ID=gene-VA249_RS03900;Name=fcrX;gbkey=Gene;gene=fcrX;gene_biotype=protein_coding;locus_tag=VA249_RS03900;old_locus_tag=VYA_07420 NZ_AP024165.1 Protein Homology CDS 832119 832568 . - 0 ID=cds-WP_128811363.1;Parent=gene-VA249_RS03900;Dbxref=Genbank:WP_128811363.1;Name=WP_128811363.1;Ontology_term=GO:0003700;gbkey=CDS;gene=fcrX;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005489847.1;locus_tag=VA249_RS03900;product=ferric iron uptake transcriptional regulator FcrX;protein_id=WP_128811363.1;transl_table=11 NZ_AP024165.1 RefSeq gene 832768 833271 . + . ID=gene-VA249_RS03905;Name=VA249_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03905;old_locus_tag=VYA_07430 NZ_AP024165.1 Protein Homology CDS 832768 833271 . + 0 ID=cds-WP_211919799.1;Parent=gene-VA249_RS03905;Dbxref=Genbank:WP_211919799.1;Name=WP_211919799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446799.1;locus_tag=VA249_RS03905;product=DUF4442 domain-containing protein;protein_id=WP_211919799.1;transl_table=11 NZ_AP024165.1 RefSeq gene 833399 833932 . - . ID=gene-VA249_RS03910;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=VA249_RS03910;old_locus_tag=VYA_07440 NZ_AP024165.1 Protein Homology CDS 833399 833932 . - 0 ID=cds-WP_128811362.1;Parent=gene-VA249_RS03910;Dbxref=Genbank:WP_128811362.1;Name=WP_128811362.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006959590.1;locus_tag=VA249_RS03910;product=flavodoxin FldA;protein_id=WP_128811362.1;transl_table=11 NZ_AP024165.1 RefSeq gene 833983 834204 . - . ID=gene-VA249_RS03915;Name=VA249_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03915;old_locus_tag=VYA_07450 NZ_AP024165.1 Protein Homology CDS 833983 834204 . - 0 ID=cds-WP_128812327.1;Parent=gene-VA249_RS03915;Dbxref=Genbank:WP_128812327.1;Name=WP_128812327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001899378.1;locus_tag=VA249_RS03915;product=DUF2788 domain-containing protein;protein_id=WP_128812327.1;transl_table=11 NZ_AP024165.1 RefSeq gene 834317 835084 . - . ID=gene-VA249_RS03920;Name=VA249_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03920;old_locus_tag=VYA_07460 NZ_AP024165.1 Protein Homology CDS 834317 835084 . - 0 ID=cds-WP_221069032.1;Parent=gene-VA249_RS03920;Dbxref=Genbank:WP_221069032.1;Name=WP_221069032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197163.1;locus_tag=VA249_RS03920;product=alpha/beta fold hydrolase;protein_id=WP_221069032.1;transl_table=11 NZ_AP024165.1 RefSeq gene 835177 835719 . + . ID=gene-VA249_RS03925;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=VA249_RS03925;old_locus_tag=VYA_07470 NZ_AP024165.1 Protein Homology CDS 835177 835719 . + 0 ID=cds-WP_128811361.1;Parent=gene-VA249_RS03925;Dbxref=Genbank:WP_128811361.1;Name=WP_128811361.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231141.1;locus_tag=VA249_RS03925;product=replication initiation negative regulator SeqA;protein_id=WP_128811361.1;transl_table=11 NZ_AP024165.1 RefSeq gene 835814 837460 . + . ID=gene-VA249_RS03930;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=VA249_RS03930;old_locus_tag=VYA_07480 NZ_AP024165.1 Protein Homology CDS 835814 837460 . + 0 ID=cds-WP_221069034.1;Parent=gene-VA249_RS03930;Dbxref=Genbank:WP_221069034.1;Name=WP_221069034.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455478.1;locus_tag=VA249_RS03930;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_221069034.1;transl_table=11 NZ_AP024165.1 RefSeq gene 837530 838309 . - . ID=gene-VA249_RS03935;Name=VA249_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03935;old_locus_tag=VYA_07490 NZ_AP024165.1 Protein Homology CDS 837530 838309 . - 0 ID=cds-WP_221069035.1;Parent=gene-VA249_RS03935;Dbxref=Genbank:WP_221069035.1;Name=WP_221069035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455460.1;locus_tag=VA249_RS03935;product=DUF1853 family protein;protein_id=WP_221069035.1;transl_table=11 NZ_AP024165.1 RefSeq gene 838531 839289 . + . ID=gene-VA249_RS03940;Name=VA249_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03940;old_locus_tag=VYA_07500 NZ_AP024165.1 Protein Homology CDS 838531 839289 . + 0 ID=cds-WP_221069036.1;Parent=gene-VA249_RS03940;Dbxref=Genbank:WP_221069036.1;Name=WP_221069036.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008221166.1;locus_tag=VA249_RS03940;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_221069036.1;transl_table=11 NZ_AP024165.1 RefSeq gene 839361 840650 . - . ID=gene-VA249_RS03945;Name=VA249_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03945;old_locus_tag=VYA_07510 NZ_AP024165.1 Protein Homology CDS 839361 840650 . - 0 ID=cds-WP_211919793.1;Parent=gene-VA249_RS03945;Dbxref=Genbank:WP_211919793.1;Name=WP_211919793.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017630646.1;locus_tag=VA249_RS03945;product=citrate synthase;protein_id=WP_211919793.1;transl_table=11 NZ_AP024165.1 RefSeq gene 841046 841438 . + . ID=gene-VA249_RS03950;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=VA249_RS03950;old_locus_tag=VYA_07520 NZ_AP024165.1 Protein Homology CDS 841046 841438 . + 0 ID=cds-WP_221069037.1;Parent=gene-VA249_RS03950;Dbxref=Genbank:WP_221069037.1;Name=WP_221069037.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010318676.1;locus_tag=VA249_RS03950;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_221069037.1;transl_table=11 NZ_AP024165.1 RefSeq gene 841432 841776 . + . ID=gene-VA249_RS03955;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=VA249_RS03955;old_locus_tag=VYA_07530 NZ_AP024165.1 Protein Homology CDS 841432 841776 . + 0 ID=cds-WP_128811355.1;Parent=gene-VA249_RS03955;Dbxref=Genbank:WP_128811355.1;Name=WP_128811355.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004413188.1;locus_tag=VA249_RS03955;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_128811355.1;transl_table=11 NZ_AP024165.1 RefSeq gene 841777 843543 . + . ID=gene-VA249_RS03960;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=VA249_RS03960;old_locus_tag=VYA_07540 NZ_AP024165.1 Protein Homology CDS 841777 843543 . + 0 ID=cds-WP_221069038.1;Parent=gene-VA249_RS03960;Dbxref=Genbank:WP_221069038.1;Name=WP_221069038.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020331212.1;locus_tag=VA249_RS03960;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_221069038.1;transl_table=11 NZ_AP024165.1 RefSeq gene 843559 844269 . + . ID=gene-VA249_RS03965;Name=VA249_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS03965;old_locus_tag=VYA_07550 NZ_AP024165.1 Protein Homology CDS 843559 844269 . + 0 ID=cds-WP_128812326.1;Parent=gene-VA249_RS03965;Dbxref=Genbank:WP_128812326.1;Name=WP_128812326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020430725.1;locus_tag=VA249_RS03965;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_128812326.1;transl_table=11 NZ_AP024165.1 RefSeq gene 844362 847187 . + . ID=gene-VA249_RS03970;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=VA249_RS03970;old_locus_tag=VYA_07560 NZ_AP024165.1 Protein Homology CDS 844362 847187 . + 0 ID=cds-WP_128811353.1;Parent=gene-VA249_RS03970;Dbxref=Genbank:WP_128811353.1;Name=WP_128811353.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008078598.1;locus_tag=VA249_RS03970;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_128811353.1;transl_table=11 NZ_AP024165.1 RefSeq gene 847216 848424 . + . ID=gene-VA249_RS03975;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=VA249_RS03975;old_locus_tag=VYA_07570 NZ_AP024165.1 Protein Homology CDS 847216 848424 . + 0 ID=cds-WP_221069039.1;Parent=gene-VA249_RS03975;Dbxref=Genbank:WP_221069039.1;Name=WP_221069039.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013856350.1;locus_tag=VA249_RS03975;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_221069039.1;transl_table=11 NZ_AP024165.1 RefSeq gene 848627 849793 . + . ID=gene-VA249_RS03980;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=VA249_RS03980;old_locus_tag=VYA_07580 NZ_AP024165.1 Protein Homology CDS 848627 849793 . + 0 ID=cds-WP_005426700.1;Parent=gene-VA249_RS03980;Dbxref=Genbank:WP_005426700.1;Name=WP_005426700.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599007.1;locus_tag=VA249_RS03980;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_005426700.1;transl_table=11 NZ_AP024165.1 RefSeq gene 849793 850665 . + . ID=gene-VA249_RS03985;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=VA249_RS03985;old_locus_tag=VYA_07590 NZ_AP024165.1 Protein Homology CDS 849793 850665 . + 0 ID=cds-WP_099079337.1;Parent=gene-VA249_RS03985;Dbxref=Genbank:WP_099079337.1;Name=WP_099079337.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010627759.1;locus_tag=VA249_RS03985;product=succinate--CoA ligase subunit alpha;protein_id=WP_099079337.1;transl_table=11 NZ_AP024165.1 RefSeq gene 850754 851539 . - . ID=gene-VA249_RS03990;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=VA249_RS03990;old_locus_tag=VYA_07600 NZ_AP024165.1 Protein Homology CDS 850754 851539 . - 0 ID=cds-WP_221069799.1;Parent=gene-VA249_RS03990;Dbxref=Genbank:WP_221069799.1;Name=WP_221069799.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446842.1;locus_tag=VA249_RS03990;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_221069799.1;transl_table=11 NZ_AP024165.1 RefSeq gene 851532 852320 . - . ID=gene-VA249_RS03995;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=VA249_RS03995;old_locus_tag=VYA_07610 NZ_AP024165.1 Protein Homology CDS 851532 852320 . - 0 ID=cds-WP_221069040.1;Parent=gene-VA249_RS03995;Dbxref=Genbank:WP_221069040.1;Name=WP_221069040.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078269.1;locus_tag=VA249_RS03995;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_221069040.1;transl_table=11 NZ_AP024165.1 RefSeq gene 852399 853283 . + . ID=gene-VA249_RS04000;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=VA249_RS04000;old_locus_tag=VYA_07620 NZ_AP024165.1 Protein Homology CDS 852399 853283 . + 0 ID=cds-WP_221069041.1;Parent=gene-VA249_RS04000;Dbxref=Genbank:WP_221069041.1;Name=WP_221069041.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446429.1;locus_tag=VA249_RS04000;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_221069041.1;transl_table=11 NZ_AP024165.1 RefSeq gene 853488 856856 . + . ID=gene-VA249_RS04005;Name=VA249_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04005;old_locus_tag=VYA_07630 NZ_AP024165.1 Protein Homology CDS 853488 856856 . + 0 ID=cds-WP_221069042.1;Parent=gene-VA249_RS04005;Dbxref=Genbank:WP_221069042.1;Name=WP_221069042.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127269.1;locus_tag=VA249_RS04005;product=helix-turn-helix domain-containing protein;protein_id=WP_221069042.1;transl_table=11 NZ_AP024165.1 RefSeq gene 857648 857875 . + . ID=gene-VA249_RS04010;Name=VA249_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04010;old_locus_tag=VYA_07640 NZ_AP024165.1 Protein Homology CDS 857648 857875 . + 0 ID=cds-WP_128811348.1;Parent=gene-VA249_RS04010;Dbxref=Genbank:WP_128811348.1;Name=WP_128811348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426705.1;locus_tag=VA249_RS04010;product=ferrous iron transport protein A;protein_id=WP_128811348.1;transl_table=11 NZ_AP024165.1 RefSeq gene 857875 860151 . + . ID=gene-VA249_RS04015;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=VA249_RS04015;old_locus_tag=VYA_07650 NZ_AP024165.1 Protein Homology CDS 857875 860151 . + 0 ID=cds-WP_221069043.1;Parent=gene-VA249_RS04015;Dbxref=Genbank:WP_221069043.1;Name=WP_221069043.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016021;gbkey=CDS;gene=feoB;go_component=integral component of membrane|0016021||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017056416.1;locus_tag=VA249_RS04015;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_221069043.1;transl_table=11 NZ_AP024165.1 RefSeq gene 860148 860378 . + . ID=gene-VA249_RS04020;Name=VA249_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04020;old_locus_tag=VYA_07660 NZ_AP024165.1 Protein Homology CDS 860148 860378 . + 0 ID=cds-WP_005426709.1;Parent=gene-VA249_RS04020;Dbxref=Genbank:WP_005426709.1;Name=WP_005426709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436995.1;locus_tag=VA249_RS04020;product=FeoC-like transcriptional regulator;protein_id=WP_005426709.1;transl_table=11 NZ_AP024165.1 RefSeq gene 860566 860994 . - . ID=gene-VA249_RS04025;Name=VA249_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04025;old_locus_tag=VYA_07670 NZ_AP024165.1 Protein Homology CDS 860566 860994 . - 0 ID=cds-WP_221069044.1;Parent=gene-VA249_RS04025;Dbxref=Genbank:WP_221069044.1;Name=WP_221069044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446436.1;locus_tag=VA249_RS04025;product=HIT family protein;protein_id=WP_221069044.1;transl_table=11 NZ_AP024165.1 RefSeq gene 861102 862835 . - . ID=gene-VA249_RS04030;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=VA249_RS04030;old_locus_tag=VYA_07680 NZ_AP024165.1 Protein Homology CDS 861102 862835 . - 0 ID=cds-WP_128811345.1;Parent=gene-VA249_RS04030;Dbxref=Genbank:WP_128811345.1;Name=WP_128811345.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847308.1;locus_tag=VA249_RS04030;product=arginine--tRNA ligase;protein_id=WP_128811345.1;transl_table=11 NZ_AP024165.1 RefSeq gene 863115 863711 . + . ID=gene-VA249_RS04035;Name=VA249_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04035;old_locus_tag=VYA_07690 NZ_AP024165.1 Protein Homology CDS 863115 863711 . + 0 ID=cds-WP_221069801.1;Parent=gene-VA249_RS04035;Dbxref=Genbank:WP_221069801.1;Name=WP_221069801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296401.1;locus_tag=VA249_RS04035;product=VOC family protein;protein_id=WP_221069801.1;transl_table=11 NZ_AP024165.1 RefSeq gene 863809 864642 . - . ID=gene-VA249_RS04040;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=VA249_RS04040;old_locus_tag=VYA_07700 NZ_AP024165.1 Protein Homology CDS 863809 864642 . - 0 ID=cds-WP_128811344.1;Parent=gene-VA249_RS04040;Dbxref=Genbank:WP_128811344.1;Name=WP_128811344.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017051331.1;locus_tag=VA249_RS04040;product=formyltetrahydrofolate deformylase;protein_id=WP_128811344.1;transl_table=11 NZ_AP024165.1 RefSeq gene 864859 866784 . + . ID=gene-VA249_RS04045;Name=VA249_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04045;old_locus_tag=VYA_07710 NZ_AP024165.1 Protein Homology CDS 864859 866784 . + 0 ID=cds-WP_221069045.1;Parent=gene-VA249_RS04045;Dbxref=Genbank:WP_221069045.1;Name=WP_221069045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196053.1;locus_tag=VA249_RS04045;product=ATP-dependent DNA helicase;protein_id=WP_221069045.1;transl_table=11 NZ_AP024165.1 RefSeq gene 866831 867532 . + . ID=gene-VA249_RS04050;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=VA249_RS04050;old_locus_tag=VYA_07720 NZ_AP024165.1 Protein Homology CDS 866831 867532 . + 0 ID=cds-WP_221069046.1;Parent=gene-VA249_RS04050;Dbxref=Genbank:WP_221069046.1;Name=WP_221069046.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231168.1;locus_tag=VA249_RS04050;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_221069046.1;transl_table=11 NZ_AP024165.1 RefSeq gene 867641 867946 . + . ID=gene-VA249_RS04055;Name=VA249_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04055;old_locus_tag=VYA_07730 NZ_AP024165.1 Protein Homology CDS 867641 867946 . + 0 ID=cds-WP_221069047.1;Parent=gene-VA249_RS04055;Dbxref=Genbank:WP_221069047.1;Name=WP_221069047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253639.1;locus_tag=VA249_RS04055;product=chromosome partitioning protein ParA;protein_id=WP_221069047.1;transl_table=11 NZ_AP024165.1 RefSeq gene 867993 868550 . + . ID=gene-VA249_RS04060;Name=VA249_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04060;old_locus_tag=VYA_07740 NZ_AP024165.1 Protein Homology CDS 867993 868550 . + 0 ID=cds-WP_221069048.1;Parent=gene-VA249_RS04060;Dbxref=Genbank:WP_221069048.1;Name=WP_221069048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707198.1;locus_tag=VA249_RS04060;product=Slp family lipoprotein;protein_id=WP_221069048.1;transl_table=11 NZ_AP024165.1 RefSeq gene 868557 869411 . + . ID=gene-VA249_RS04065;Name=VA249_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04065;old_locus_tag=VYA_07750 NZ_AP024165.1 Protein Homology CDS 868557 869411 . + 0 ID=cds-WP_221069049.1;Parent=gene-VA249_RS04065;Dbxref=Genbank:WP_221069049.1;Name=WP_221069049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196050.1;locus_tag=VA249_RS04065;product=alpha/beta hydrolase;protein_id=WP_221069049.1;transl_table=11 NZ_AP024165.1 RefSeq gene 869518 871209 . + . ID=gene-VA249_RS04070;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=VA249_RS04070;old_locus_tag=VYA_07760 NZ_AP024165.1 Protein Homology CDS 869518 871209 . + 0 ID=cds-WP_128811338.1;Parent=gene-VA249_RS04070;Dbxref=Genbank:WP_128811338.1;Name=WP_128811338.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396044.1;locus_tag=VA249_RS04070;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_128811338.1;transl_table=11 NZ_AP024165.1 RefSeq gene 871297 872415 . + . ID=gene-VA249_RS04075;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=VA249_RS04075;old_locus_tag=VYA_07770 NZ_AP024165.1 Protein Homology CDS 871297 872415 . + 0 ID=cds-WP_221069050.1;Parent=gene-VA249_RS04075;Dbxref=Genbank:WP_221069050.1;Name=WP_221069050.1;Ontology_term=GO:0006396,GO:0016891;gbkey=CDS;gene=rnd;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645562.1;locus_tag=VA249_RS04075;product=ribonuclease D;protein_id=WP_221069050.1;transl_table=11 NZ_AP024165.1 RefSeq gene 872744 873007 . - . ID=gene-VA249_RS04080;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=VA249_RS04080;old_locus_tag=VYA_07780 NZ_AP024165.1 Protein Homology CDS 872744 873007 . - 0 ID=cds-WP_128811337.1;Parent=gene-VA249_RS04080;Dbxref=Genbank:WP_128811337.1;Name=WP_128811337.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231174.1;locus_tag=VA249_RS04080;product=cell division topological specificity factor MinE;protein_id=WP_128811337.1;transl_table=11 NZ_AP024165.1 RefSeq gene 873010 873822 . - . ID=gene-VA249_RS04085;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=VA249_RS04085;old_locus_tag=VYA_07790 NZ_AP024165.1 Protein Homology CDS 873010 873822 . - 0 ID=cds-WP_128811336.1;Parent=gene-VA249_RS04085;Dbxref=Genbank:WP_128811336.1;Name=WP_128811336.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020327867.1;locus_tag=VA249_RS04085;product=septum site-determining protein MinD;protein_id=WP_128811336.1;transl_table=11 NZ_AP024165.1 RefSeq gene 873840 874502 . - . ID=gene-VA249_RS04090;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=VA249_RS04090;old_locus_tag=VYA_07800 NZ_AP024165.1 Protein Homology CDS 873840 874502 . - 0 ID=cds-WP_221069051.1;Parent=gene-VA249_RS04090;Dbxref=Genbank:WP_221069051.1;Name=WP_221069051.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047763.1;locus_tag=VA249_RS04090;product=septum site-determining protein MinC;protein_id=WP_221069051.1;transl_table=11 NZ_AP024165.1 RefSeq gene 874700 874981 . + . ID=gene-VA249_RS04095;Name=VA249_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04095;old_locus_tag=VYA_07810 NZ_AP024165.1 Protein Homology CDS 874700 874981 . + 0 ID=cds-WP_211919777.1;Parent=gene-VA249_RS04095;Dbxref=Genbank:WP_211919777.1;Name=WP_211919777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078248.1;locus_tag=VA249_RS04095;product=YcgL domain-containing protein;protein_id=WP_211919777.1;transl_table=11 NZ_AP024165.1 RefSeq gene 875031 876002 . + . ID=gene-VA249_RS04100;Name=VA249_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04100;old_locus_tag=VYA_07820 NZ_AP024165.1 Protein Homology CDS 875031 876002 . + 0 ID=cds-WP_221069052.1;Parent=gene-VA249_RS04100;Dbxref=Genbank:WP_221069052.1;Name=WP_221069052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735486.1;locus_tag=VA249_RS04100;product=lytic murein transglycosylase;protein_id=WP_221069052.1;transl_table=11 NZ_AP024165.1 RefSeq gene 876074 877018 . + . ID=gene-VA249_RS04105;Name=VA249_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04105;old_locus_tag=VYA_07830 NZ_AP024165.1 Protein Homology CDS 876074 877018 . + 0 ID=cds-WP_221069053.1;Parent=gene-VA249_RS04105;Dbxref=Genbank:WP_221069053.1;Name=WP_221069053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634801.1;locus_tag=VA249_RS04105;product=LysR family transcriptional regulator;protein_id=WP_221069053.1;transl_table=11 NZ_AP024165.1 RefSeq gene 877256 878455 . + . ID=gene-VA249_RS04110;Name=VA249_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04110;old_locus_tag=VYA_07840 NZ_AP024165.1 Protein Homology CDS 877256 878455 . + 0 ID=cds-WP_128811333.1;Parent=gene-VA249_RS04110;Dbxref=Genbank:WP_128811333.1;Name=WP_128811333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420988.1;locus_tag=VA249_RS04110;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_128811333.1;transl_table=11 NZ_AP024165.1 RefSeq gene 878527 879387 . - . ID=gene-VA249_RS04115;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=VA249_RS04115;old_locus_tag=VYA_07850 NZ_AP024165.1 Protein Homology CDS 878527 879387 . - 0 ID=cds-WP_221069054.1;Parent=gene-VA249_RS04115;Dbxref=Genbank:WP_221069054.1;Name=WP_221069054.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430847.1;locus_tag=VA249_RS04115;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_221069054.1;transl_table=11 NZ_AP024165.1 RefSeq gene 879592 879668 . + . ID=gene-VA249_RS04120;Name=VA249_RS04120;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04120;old_locus_tag=VYA_t00390 NZ_AP024165.1 tRNAscan-SE tRNA 879592 879668 . + . ID=rna-VA249_RS04120;Parent=gene-VA249_RS04120;anticodon=(pos:879626..879628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04120;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 879592 879668 . + . ID=exon-VA249_RS04120-1;Parent=rna-VA249_RS04120;anticodon=(pos:879626..879628);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04120;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 879859 881157 . - . ID=gene-VA249_RS04125;Name=VA249_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04125;old_locus_tag=VYA_07860 NZ_AP024165.1 Protein Homology CDS 879859 881157 . - 0 ID=cds-WP_221069055.1;Parent=gene-VA249_RS04125;Dbxref=Genbank:WP_221069055.1;Name=WP_221069055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188361.1;locus_tag=VA249_RS04125;product=hemolysin family protein;protein_id=WP_221069055.1;transl_table=11 NZ_AP024165.1 RefSeq gene 881375 882571 . + . ID=gene-VA249_RS04130;Name=VA249_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04130;old_locus_tag=VYA_07870 NZ_AP024165.1 Protein Homology CDS 881375 882571 . + 0 ID=cds-WP_221069056.1;Parent=gene-VA249_RS04130;Dbxref=Genbank:WP_221069056.1;Name=WP_221069056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707180.1;locus_tag=VA249_RS04130;product=DEAD/DEAH box helicase;protein_id=WP_221069056.1;transl_table=11 NZ_AP024165.1 RefSeq gene 882906 883568 . + . ID=gene-VA249_RS04135;Name=VA249_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04135;old_locus_tag=VYA_07880 NZ_AP024165.1 Protein Homology CDS 882906 883568 . + 0 ID=cds-WP_128811316.1;Parent=gene-VA249_RS04135;Dbxref=Genbank:WP_128811316.1;Name=WP_128811316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005390487.1;locus_tag=VA249_RS04135;product=TrkA family potassium uptake protein;protein_id=WP_128811316.1;transl_table=11 NZ_AP024165.1 RefSeq gene 883565 884932 . + . ID=gene-VA249_RS04140;Name=VA249_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04140;old_locus_tag=VYA_07890 NZ_AP024165.1 Protein Homology CDS 883565 884932 . + 0 ID=cds-WP_221069057.1;Parent=gene-VA249_RS04140;Dbxref=Genbank:WP_221069057.1;Name=WP_221069057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818992.1;locus_tag=VA249_RS04140;product=TrkH family potassium uptake protein;protein_id=WP_221069057.1;transl_table=11 NZ_AP024165.1 RefSeq gene 885128 885934 . + . ID=gene-VA249_RS04145;Name=VA249_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04145;old_locus_tag=VYA_07900 NZ_AP024165.1 Protein Homology CDS 885128 885934 . + 0 ID=cds-WP_221069058.1;Parent=gene-VA249_RS04145;Dbxref=Genbank:WP_221069058.1;Name=WP_221069058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005390499.1;locus_tag=VA249_RS04145;product=sugar transporter;protein_id=WP_221069058.1;transl_table=11 NZ_AP024165.1 RefSeq gene 886148 887617 . + . ID=gene-VA249_RS04150;Name=VA249_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04150;old_locus_tag=VYA_07910 NZ_AP024165.1 Protein Homology CDS 886148 887617 . + 0 ID=cds-WP_221069059.1;Parent=gene-VA249_RS04150;Dbxref=Genbank:WP_221069059.1;Name=WP_221069059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707176.1;locus_tag=VA249_RS04150;product=YdiU family protein;protein_id=WP_221069059.1;transl_table=11 NZ_AP024165.1 RefSeq gene 887799 887981 . - . ID=gene-VA249_RS04155;Name=VA249_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04155;old_locus_tag=VYA_07920 NZ_AP024165.1 Protein Homology CDS 887799 887981 . - 0 ID=cds-WP_221069803.1;Parent=gene-VA249_RS04155;Dbxref=Genbank:WP_221069803.1;Name=WP_221069803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529917.1;locus_tag=VA249_RS04155;product=hypothetical protein;protein_id=WP_221069803.1;transl_table=11 NZ_AP024165.1 RefSeq gene 888264 888476 . + . ID=gene-VA249_RS24025;Name=VA249_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24025 NZ_AP024165.1 Protein Homology CDS 888264 888476 . + 0 ID=cds-WP_225923904.1;Parent=gene-VA249_RS24025;Dbxref=Genbank:WP_225923904.1;Name=WP_225923904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649176.1;locus_tag=VA249_RS24025;product=hypothetical protein;protein_id=WP_225923904.1;transl_table=11 NZ_AP024165.1 RefSeq gene 888749 890053 . + . ID=gene-VA249_RS04160;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=VA249_RS04160;old_locus_tag=VYA_07930 NZ_AP024165.1 Protein Homology CDS 888749 890053 . + 0 ID=cds-WP_128811313.1;Parent=gene-VA249_RS04160;Dbxref=Genbank:WP_128811313.1;Name=WP_128811313.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004414751.1;locus_tag=VA249_RS04160;product=trigger factor;protein_id=WP_128811313.1;transl_table=11 NZ_AP024165.1 RefSeq gene 890159 890785 . + . ID=gene-VA249_RS04165;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=VA249_RS04165;old_locus_tag=VYA_07940 NZ_AP024165.1 Protein Homology CDS 890159 890785 . + 0 ID=cds-WP_211919766.1;Parent=gene-VA249_RS04165;Dbxref=Genbank:WP_211919766.1;Name=WP_211919766.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001965575.1;locus_tag=VA249_RS04165;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_211919766.1;transl_table=11 NZ_AP024165.1 RefSeq gene 890857 892137 . + . ID=gene-VA249_RS04170;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=VA249_RS04170;old_locus_tag=VYA_07950 NZ_AP024165.1 Protein Homology CDS 890857 892137 . + 0 ID=cds-WP_128811312.1;Parent=gene-VA249_RS04170;Dbxref=Genbank:WP_128811312.1;Name=WP_128811312.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020429992.1;locus_tag=VA249_RS04170;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_128811312.1;transl_table=11 NZ_AP024165.1 RefSeq gene 892268 894619 . + . ID=gene-VA249_RS04175;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=VA249_RS04175;old_locus_tag=VYA_07960 NZ_AP024165.1 Protein Homology CDS 892268 894619 . + 0 ID=cds-WP_128811311.1;Parent=gene-VA249_RS04175;Dbxref=Genbank:WP_128811311.1;Name=WP_128811311.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019824784.1;locus_tag=VA249_RS04175;product=endopeptidase La;protein_id=WP_128811311.1;transl_table=11 NZ_AP024165.1 RefSeq gene 894811 895083 . + . ID=gene-VA249_RS04180;Name=VA249_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04180;old_locus_tag=VYA_07970 NZ_AP024165.1 Protein Homology CDS 894811 895083 . + 0 ID=cds-WP_128811310.1;Parent=gene-VA249_RS04180;Dbxref=Genbank:WP_128811310.1;Name=WP_128811310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013572181.1;locus_tag=VA249_RS04180;product=HU family DNA-binding protein;protein_id=WP_128811310.1;transl_table=11 NZ_AP024165.1 RefSeq gene 895319 897178 . + . ID=gene-VA249_RS04185;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=VA249_RS04185;old_locus_tag=VYA_07980 NZ_AP024165.1 Protein Homology CDS 895319 897178 . + 0 ID=cds-WP_221069060.1;Parent=gene-VA249_RS04185;Dbxref=Genbank:WP_221069060.1;Name=WP_221069060.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446577.1;locus_tag=VA249_RS04185;product=peptidylprolyl isomerase;protein_id=WP_221069060.1;transl_table=11 NZ_AP024165.1 RefSeq gene 897368 897682 . + . ID=gene-VA249_RS04190;Name=VA249_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04190;old_locus_tag=VYA_07990 NZ_AP024165.1 Protein Homology CDS 897368 897682 . + 0 ID=cds-WP_128811308.1;Parent=gene-VA249_RS04190;Dbxref=Genbank:WP_128811308.1;Name=WP_128811308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818998.1;locus_tag=VA249_RS04190;product=helix-hairpin-helix domain-containing protein;protein_id=WP_128811308.1;transl_table=11 NZ_AP024165.1 RefSeq gene 897825 898376 . - . ID=gene-VA249_RS04195;Name=rrtA;gbkey=Gene;gene=rrtA;gene_biotype=protein_coding;locus_tag=VA249_RS04195;old_locus_tag=VYA_08000 NZ_AP024165.1 Protein Homology CDS 897825 898376 . - 0 ID=cds-WP_221069061.1;Parent=gene-VA249_RS04195;Dbxref=Genbank:WP_221069061.1;Name=WP_221069061.1;Ontology_term=GO:0036211,GO:0004252,GO:0005887;gbkey=CDS;gene=rrtA;go_component=integral component of plasma membrane|0005887||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020336146.1;locus_tag=VA249_RS04195;product=rhombosortase;protein_id=WP_221069061.1;transl_table=11 NZ_AP024165.1 RefSeq gene 898380 898997 . + . ID=gene-VA249_RS04200;Name=VA249_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04200 NZ_AP024165.1 Protein Homology CDS 898380 898997 . + 0 ID=cds-WP_221069062.1;Parent=gene-VA249_RS04200;Dbxref=Genbank:WP_221069062.1;Name=WP_221069062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196002.1;locus_tag=VA249_RS04200;product=DTW domain-containing protein;protein_id=WP_221069062.1;transl_table=11 NZ_AP024165.1 RefSeq gene 899080 900402 . - . ID=gene-VA249_RS04205;Name=VA249_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04205;old_locus_tag=VYA_08020 NZ_AP024165.1 Protein Homology CDS 899080 900402 . - 0 ID=cds-WP_221069063.1;Parent=gene-VA249_RS04205;Dbxref=Genbank:WP_221069063.1;Name=WP_221069063.1;Ontology_term=GO:0006203,GO:0008832;gbkey=CDS;go_function=dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196001.1;locus_tag=VA249_RS04205;product=anti-phage deoxyguanosine triphosphatase;protein_id=WP_221069063.1;transl_table=11 NZ_AP024165.1 RefSeq gene 900418 901002 . - . ID=gene-VA249_RS04210;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=VA249_RS04210;old_locus_tag=VYA_08030 NZ_AP024165.1 Protein Homology CDS 900418 901002 . - 0 ID=cds-WP_221069064.1;Parent=gene-VA249_RS04210;Dbxref=Genbank:WP_221069064.1;Name=WP_221069064.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020329908.1;locus_tag=VA249_RS04210;product=5'-deoxynucleotidase;protein_id=WP_221069064.1;transl_table=11 NZ_AP024165.1 RefSeq gene 901116 902330 . - . ID=gene-VA249_RS04215;Name=VA249_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04215;old_locus_tag=VYA_08040 NZ_AP024165.1 Protein Homology CDS 901116 902330 . - 0 ID=cds-WP_128811305.1;Parent=gene-VA249_RS04215;Dbxref=Genbank:WP_128811305.1;Name=WP_128811305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447021.1;locus_tag=VA249_RS04215;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_128811305.1;transl_table=11 NZ_AP024165.1 RefSeq gene 902548 903855 . + . ID=gene-VA249_RS04220;Name=VA249_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04220;old_locus_tag=VYA_08050 NZ_AP024165.1 Protein Homology CDS 902548 903855 . + 0 ID=cds-WP_221069065.1;Parent=gene-VA249_RS04220;Dbxref=Genbank:WP_221069065.1;Name=WP_221069065.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819001.1;locus_tag=VA249_RS04220;product=isochorismate synthase;protein_id=WP_221069065.1;transl_table=11 NZ_AP024165.1 RefSeq gene 903852 905561 . + . ID=gene-VA249_RS04225;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=VA249_RS04225;old_locus_tag=VYA_08060 NZ_AP024165.1 Protein Homology CDS 903852 905561 . + 0 ID=cds-WP_221069066.1;Parent=gene-VA249_RS04225;Dbxref=Genbank:WP_221069066.1;Name=WP_221069066.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446592.1;locus_tag=VA249_RS04225;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_221069066.1;transl_table=11 NZ_AP024165.1 RefSeq gene 905548 906375 . + . ID=gene-VA249_RS04230;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=VA249_RS04230;old_locus_tag=VYA_08070 NZ_AP024165.1 Protein Homology CDS 905548 906375 . + 0 ID=cds-WP_221069067.1;Parent=gene-VA249_RS04230;Dbxref=Genbank:WP_221069067.1;Name=WP_221069067.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005382319.1;locus_tag=VA249_RS04230;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_221069067.1;transl_table=11 NZ_AP024165.1 RefSeq gene 906368 907234 . + . ID=gene-VA249_RS04235;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=VA249_RS04235;old_locus_tag=VYA_08080 NZ_AP024165.1 Protein Homology CDS 906368 907234 . + 0 ID=cds-WP_128811301.1;Parent=gene-VA249_RS04235;Dbxref=Genbank:WP_128811301.1;Name=WP_128811301.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010320004.1;locus_tag=VA249_RS04235;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_128811301.1;transl_table=11 NZ_AP024165.1 RefSeq gene 907365 908354 . + . ID=gene-VA249_RS04240;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=VA249_RS04240;old_locus_tag=VYA_08090 NZ_AP024165.1 Protein Homology CDS 907365 908354 . + 0 ID=cds-WP_221069068.1;Parent=gene-VA249_RS04240;Dbxref=Genbank:WP_221069068.1;Name=WP_221069068.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448696.1;locus_tag=VA249_RS04240;product=o-succinylbenzoate synthase;protein_id=WP_221069068.1;transl_table=11 NZ_AP024165.1 RefSeq gene 908339 909769 . + . ID=gene-VA249_RS04245;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=VA249_RS04245;old_locus_tag=VYA_08100 NZ_AP024165.1 Protein Homology CDS 908339 909769 . + 0 ID=cds-WP_221069069.1;Parent=gene-VA249_RS04245;Dbxref=Genbank:WP_221069069.1;Name=WP_221069069.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447033.1;locus_tag=VA249_RS04245;product=o-succinylbenzoate--CoA ligase;protein_id=WP_221069069.1;transl_table=11 NZ_AP024165.1 RefSeq gene 909905 910093 . + . ID=gene-VA249_RS04250;Name=VA249_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04250;old_locus_tag=VYA_08110 NZ_AP024165.1 Protein Homology CDS 909905 910093 . + 0 ID=cds-WP_128811299.1;Parent=gene-VA249_RS04250;Dbxref=Genbank:WP_128811299.1;Name=WP_128811299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195993.1;locus_tag=VA249_RS04250;product=hypothetical protein;protein_id=WP_128811299.1;transl_table=11 NZ_AP024165.1 RefSeq gene 910105 911010 . - . ID=gene-VA249_RS04255;Name=VA249_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04255;old_locus_tag=VYA_08120 NZ_AP024165.1 Protein Homology CDS 910105 911010 . - 0 ID=cds-WP_211919972.1;Parent=gene-VA249_RS04255;Dbxref=Genbank:WP_211919972.1;Name=WP_211919972.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698334.1;locus_tag=VA249_RS04255;product=putative sulfate exporter family transporter;protein_id=WP_211919972.1;transl_table=11 NZ_AP024165.1 RefSeq gene 911171 913045 . - . ID=gene-VA249_RS04260;Name=VA249_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04260;old_locus_tag=VYA_08130 NZ_AP024165.1 Protein Homology CDS 911171 913045 . - 0 ID=cds-WP_221069070.1;Parent=gene-VA249_RS04260;Dbxref=Genbank:WP_221069070.1;Name=WP_221069070.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649131.1;locus_tag=VA249_RS04260;product=MFS transporter;protein_id=WP_221069070.1;transl_table=11 NZ_AP024165.1 RefSeq gene 913059 913649 . - . ID=gene-VA249_RS04265;Name=VA249_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04265;old_locus_tag=VYA_08140 NZ_AP024165.1 Protein Homology CDS 913059 913649 . - 0 ID=cds-WP_221069071.1;Parent=gene-VA249_RS04265;Dbxref=Genbank:WP_221069071.1;Name=WP_221069071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844320.1;locus_tag=VA249_RS04265;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221069071.1;transl_table=11 NZ_AP024165.1 RefSeq gene 913896 914768 . + . ID=gene-VA249_RS04270;Name=VA249_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04270;old_locus_tag=VYA_08150 NZ_AP024165.1 Protein Homology CDS 913896 914768 . + 0 ID=cds-WP_211919755.1;Parent=gene-VA249_RS04270;Dbxref=Genbank:WP_211919755.1;Name=WP_211919755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384268.1;locus_tag=VA249_RS04270;product=TIM44-like domain-containing protein;protein_id=WP_211919755.1;transl_table=11 NZ_AP024165.1 RefSeq gene 915289 915373 . - . ID=gene-VA249_RS04275;Name=VA249_RS04275;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04275;old_locus_tag=VYA_t00400 NZ_AP024165.1 tRNAscan-SE tRNA 915289 915373 . - . ID=rna-VA249_RS04275;Parent=gene-VA249_RS04275;anticodon=(pos:complement(915337..915339));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04275;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 915289 915373 . - . ID=exon-VA249_RS04275-1;Parent=rna-VA249_RS04275;anticodon=(pos:complement(915337..915339));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04275;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 915468 915552 . - . ID=gene-VA249_RS04280;Name=VA249_RS04280;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04280;old_locus_tag=VYA_t00410 NZ_AP024165.1 tRNAscan-SE tRNA 915468 915552 . - . ID=rna-VA249_RS04280;Parent=gene-VA249_RS04280;anticodon=(pos:complement(915516..915518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04280;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 915468 915552 . - . ID=exon-VA249_RS04280-1;Parent=rna-VA249_RS04280;anticodon=(pos:complement(915516..915518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04280;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 915648 915732 . - . ID=gene-VA249_RS04285;Name=VA249_RS04285;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04285;old_locus_tag=VYA_t00420 NZ_AP024165.1 tRNAscan-SE tRNA 915648 915732 . - . ID=rna-VA249_RS04285;Parent=gene-VA249_RS04285;anticodon=(pos:complement(915696..915698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04285;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 915648 915732 . - . ID=exon-VA249_RS04285-1;Parent=rna-VA249_RS04285;anticodon=(pos:complement(915696..915698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04285;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 915827 915911 . - . ID=gene-VA249_RS04290;Name=VA249_RS04290;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04290;old_locus_tag=VYA_t00430 NZ_AP024165.1 tRNAscan-SE tRNA 915827 915911 . - . ID=rna-VA249_RS04290;Parent=gene-VA249_RS04290;anticodon=(pos:complement(915875..915877));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04290;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 915827 915911 . - . ID=exon-VA249_RS04290-1;Parent=rna-VA249_RS04290;anticodon=(pos:complement(915875..915877));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04290;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 916006 916090 . - . ID=gene-VA249_RS04295;Name=VA249_RS04295;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04295;old_locus_tag=VYA_t00440 NZ_AP024165.1 tRNAscan-SE tRNA 916006 916090 . - . ID=rna-VA249_RS04295;Parent=gene-VA249_RS04295;anticodon=(pos:complement(916054..916056));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04295;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 916006 916090 . - . ID=exon-VA249_RS04295-1;Parent=rna-VA249_RS04295;anticodon=(pos:complement(916054..916056));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04295;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 916186 916270 . - . ID=gene-VA249_RS04300;Name=VA249_RS04300;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04300;old_locus_tag=VYA_t00450 NZ_AP024165.1 tRNAscan-SE tRNA 916186 916270 . - . ID=rna-VA249_RS04300;Parent=gene-VA249_RS04300;anticodon=(pos:complement(916234..916236));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04300;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 916186 916270 . - . ID=exon-VA249_RS04300-1;Parent=rna-VA249_RS04300;anticodon=(pos:complement(916234..916236));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04300;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 916575 917654 . + . ID=gene-VA249_RS04305;Name=VA249_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04305;old_locus_tag=VYA_08170 NZ_AP024165.1 Protein Homology CDS 916575 917654 . + 0 ID=cds-WP_221069072.1;Parent=gene-VA249_RS04305;Dbxref=Genbank:WP_221069072.1;Name=WP_221069072.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011105748.1;locus_tag=VA249_RS04305;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221069072.1;transl_table=11 NZ_AP024165.1 RefSeq gene 917654 920767 . + . ID=gene-VA249_RS04310;Name=vmeF;gbkey=Gene;gene=vmeF;gene_biotype=protein_coding;locus_tag=VA249_RS04310;old_locus_tag=VYA_08180 NZ_AP024165.1 Protein Homology CDS 917654 920767 . + 0 ID=cds-WP_128811293.1;Parent=gene-VA249_RS04310;Dbxref=Genbank:WP_128811293.1;Name=WP_128811293.1;gbkey=CDS;gene=vmeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005481813.1;locus_tag=VA249_RS04310;product=multidrug efflux RND transporter permease subunit VmeF;protein_id=WP_128811293.1;transl_table=11 NZ_AP024165.1 RefSeq gene 921130 923028 . - . ID=gene-VA249_RS04315;Name=VA249_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04315;old_locus_tag=VYA_08190 NZ_AP024165.1 Protein Homology CDS 921130 923028 . - 0 ID=cds-WP_221069073.1;Parent=gene-VA249_RS04315;Dbxref=Genbank:WP_221069073.1;Name=WP_221069073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452055.1;locus_tag=VA249_RS04315;product=BCCT family transporter;protein_id=WP_221069073.1;transl_table=11 NZ_AP024165.1 RefSeq gene 923146 923523 . - . ID=gene-VA249_RS04320;Name=VA249_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04320;old_locus_tag=VYA_08200 NZ_AP024165.1 Protein Homology CDS 923146 923523 . - 0 ID=cds-WP_221069074.1;Parent=gene-VA249_RS04320;Dbxref=Genbank:WP_221069074.1;Name=WP_221069074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532640.1;locus_tag=VA249_RS04320;product=hypothetical protein;protein_id=WP_221069074.1;transl_table=11 NZ_AP024165.1 RefSeq gene 923773 924720 . - . ID=gene-VA249_RS04325;Name=VA249_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04325;old_locus_tag=VYA_08210 NZ_AP024165.1 Protein Homology CDS 923773 924720 . - 0 ID=cds-WP_221069075.1;Parent=gene-VA249_RS04325;Dbxref=Genbank:WP_221069075.1;Name=WP_221069075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128566.1;locus_tag=VA249_RS04325;product=ChaN family lipoprotein;protein_id=WP_221069075.1;transl_table=11 NZ_AP024165.1 RefSeq gene 924804 925646 . - . ID=gene-VA249_RS04330;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=VA249_RS04330;old_locus_tag=VYA_08220 NZ_AP024165.1 Protein Homology CDS 924804 925646 . - 0 ID=cds-WP_221069076.1;Parent=gene-VA249_RS04330;Dbxref=Genbank:WP_221069076.1;Name=WP_221069076.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297080.1;locus_tag=VA249_RS04330;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_221069076.1;transl_table=11 NZ_AP024165.1 RefSeq gene 925743 926627 . - . ID=gene-VA249_RS04335;Name=VA249_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04335;old_locus_tag=VYA_08230 NZ_AP024165.1 Protein Homology CDS 925743 926627 . - 0 ID=cds-WP_221069077.1;Parent=gene-VA249_RS04335;Dbxref=Genbank:WP_221069077.1;Name=WP_221069077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128562.1;locus_tag=VA249_RS04335;product=D-hexose-6-phosphate mutarotase;protein_id=WP_221069077.1;transl_table=11 NZ_AP024165.1 RefSeq gene 926762 927757 . - . ID=gene-VA249_RS04340;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=VA249_RS04340;old_locus_tag=VYA_08240 NZ_AP024165.1 Protein Homology CDS 926762 927757 . - 0 ID=cds-WP_128811287.1;Parent=gene-VA249_RS04340;Dbxref=Genbank:WP_128811287.1;Name=WP_128811287.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008042848.1;locus_tag=VA249_RS04340;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_128811287.1;transl_table=11 NZ_AP024165.1 RefSeq gene 928095 928505 . + . ID=gene-VA249_RS04345;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=VA249_RS04345;old_locus_tag=VYA_08250 NZ_AP024165.1 Protein Homology CDS 928095 928505 . + 0 ID=cds-WP_128811286.1;Parent=gene-VA249_RS04345;Dbxref=Genbank:WP_128811286.1;Name=WP_128811286.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461766.1;locus_tag=VA249_RS04345;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_128811286.1;transl_table=11 NZ_AP024165.1 RefSeq gene 928656 929477 . - . ID=gene-VA249_RS04350;Name=VA249_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04350;old_locus_tag=VYA_08260 NZ_AP024165.1 Protein Homology CDS 928656 929477 . - 0 ID=cds-WP_221069078.1;Parent=gene-VA249_RS04350;Dbxref=Genbank:WP_221069078.1;Name=WP_221069078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195691.1;locus_tag=VA249_RS04350;product=DUF2989 domain-containing protein;protein_id=WP_221069078.1;transl_table=11 NZ_AP024165.1 RefSeq gene 929579 929863 . + . ID=gene-VA249_RS04355;Name=VA249_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04355;old_locus_tag=VYA_08270 NZ_AP024165.1 Protein Homology CDS 929579 929863 . + 0 ID=cds-WP_128811284.1;Parent=gene-VA249_RS04355;Dbxref=Genbank:WP_128811284.1;Name=WP_128811284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532622.1;locus_tag=VA249_RS04355;product=DUF1315 family protein;protein_id=WP_128811284.1;transl_table=11 NZ_AP024165.1 RefSeq gene 929988 931001 . - . ID=gene-VA249_RS04360;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=VA249_RS04360;old_locus_tag=VYA_08280 NZ_AP024165.1 Protein Homology CDS 929988 931001 . - 0 ID=cds-WP_128811283.1;Parent=gene-VA249_RS04360;Dbxref=Genbank:WP_128811283.1;Name=WP_128811283.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232580.1;locus_tag=VA249_RS04360;product=asparaginase;protein_id=WP_128811283.1;transl_table=11 NZ_AP024165.1 RefSeq gene 931114 932964 . - . ID=gene-VA249_RS04365;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=VA249_RS04365;old_locus_tag=VYA_08290 NZ_AP024165.1 Protein Homology CDS 931114 932964 . - 0 ID=cds-WP_221069079.1;Parent=gene-VA249_RS04365;Dbxref=Genbank:WP_221069079.1;Name=WP_221069079.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016021;gbkey=CDS;gene=sppA;go_component=integral component of membrane|0016021||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019823769.1;locus_tag=VA249_RS04365;product=signal peptide peptidase SppA;protein_id=WP_221069079.1;transl_table=11 NZ_AP024165.1 RefSeq gene 933191 935203 . + . ID=gene-VA249_RS04370;Name=VA249_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04370;old_locus_tag=VYA_08300 NZ_AP024165.1 Protein Homology CDS 933191 935203 . + 0 ID=cds-WP_221069805.1;Parent=gene-VA249_RS04370;Dbxref=Genbank:WP_221069805.1;Name=WP_221069805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698533.1;locus_tag=VA249_RS04370;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_221069805.1;transl_table=11 NZ_AP024165.1 RefSeq gene 935388 935936 . + . ID=gene-VA249_RS04375;Name=VA249_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04375;old_locus_tag=VYA_08310 NZ_AP024165.1 Protein Homology CDS 935388 935936 . + 0 ID=cds-WP_221069080.1;Parent=gene-VA249_RS04375;Dbxref=Genbank:WP_221069080.1;Name=WP_221069080.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384915.1;locus_tag=VA249_RS04375;product=NAD(P)H nitroreductase;protein_id=WP_221069080.1;transl_table=11 NZ_AP024165.1 RefSeq gene 936039 938003 . + . ID=gene-VA249_RS04380;Name=VA249_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04380;old_locus_tag=VYA_08320 NZ_AP024165.1 Protein Homology CDS 936039 938003 . + 0 ID=cds-WP_221069081.1;Parent=gene-VA249_RS04380;Dbxref=Genbank:WP_221069081.1;Name=WP_221069081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447821.1;locus_tag=VA249_RS04380;product=DNA topoisomerase III;protein_id=WP_221069081.1;transl_table=11 NZ_AP024165.1 RefSeq gene 938148 938354 . - . ID=gene-VA249_RS04385;Name=VA249_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04385;old_locus_tag=VYA_08330 NZ_AP024165.1 Protein Homology CDS 938148 938354 . - 0 ID=cds-WP_128811280.1;Parent=gene-VA249_RS04385;Dbxref=Genbank:WP_128811280.1;Name=WP_128811280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461782.1;locus_tag=VA249_RS04385;product=hypothetical protein;protein_id=WP_128811280.1;transl_table=11 NZ_AP024165.1 RefSeq gene 938959 939288 . + . ID=gene-VA249_RS04390;Name=VA249_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04390;old_locus_tag=VYA_08340 NZ_AP024165.1 Protein Homology CDS 938959 939288 . + 0 ID=cds-WP_211919744.1;Parent=gene-VA249_RS04390;Dbxref=Genbank:WP_211919744.1;Name=WP_211919744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386661.1;locus_tag=VA249_RS04390;product=UxaA family hydrolase;protein_id=WP_211919744.1;transl_table=11 NZ_AP024165.1 RefSeq gene 939288 940463 . + . ID=gene-VA249_RS04395;Name=VA249_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04395;old_locus_tag=VYA_08350 NZ_AP024165.1 Protein Homology CDS 939288 940463 . + 0 ID=cds-WP_221069082.1;Parent=gene-VA249_RS04395;Dbxref=Genbank:WP_221069082.1;Name=WP_221069082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386660.1;locus_tag=VA249_RS04395;product=UxaA family hydrolase;protein_id=WP_221069082.1;transl_table=11 NZ_AP024165.1 RefSeq gene 940520 941479 . + . ID=gene-VA249_RS04400;Name=VA249_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04400;old_locus_tag=VYA_08360 NZ_AP024165.1 Protein Homology CDS 940520 941479 . + 0 ID=cds-WP_221069083.1;Parent=gene-VA249_RS04400;Dbxref=Genbank:WP_221069083.1;Name=WP_221069083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386659.1;locus_tag=VA249_RS04400;product=DMT family transporter;protein_id=WP_221069083.1;transl_table=11 NZ_AP024165.1 RefSeq gene 941593 942735 . + . ID=gene-VA249_RS04405;Name=VA249_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04405;old_locus_tag=VYA_08370 NZ_AP024165.1 Protein Homology CDS 941593 942735 . + 0 ID=cds-WP_211919741.1;Parent=gene-VA249_RS04405;Dbxref=Genbank:WP_211919741.1;Name=WP_211919741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713678.1;locus_tag=VA249_RS04405;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_211919741.1;transl_table=11 NZ_AP024165.1 RefSeq gene 943017 943931 . + . ID=gene-VA249_RS04410;Name=VA249_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04410;old_locus_tag=VYA_08380 NZ_AP024165.1 Protein Homology CDS 943017 943931 . + 0 ID=cds-WP_221069807.1;Parent=gene-VA249_RS04410;Dbxref=Genbank:WP_221069807.1;Name=WP_221069807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635827.1;locus_tag=VA249_RS04410;product=histone deacetylase;protein_id=WP_221069807.1;transl_table=11 NZ_AP024165.1 RefSeq gene 944783 944873 . - . ID=gene-VA249_RS04415;Name=VA249_RS04415;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04415;old_locus_tag=VYA_t00460 NZ_AP024165.1 tRNAscan-SE tRNA 944783 944873 . - . ID=rna-VA249_RS04415;Parent=gene-VA249_RS04415;anticodon=(pos:complement(944837..944839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04415;product=tRNA-Ser NZ_AP024165.1 tRNAscan-SE exon 944783 944873 . - . ID=exon-VA249_RS04415-1;Parent=rna-VA249_RS04415;anticodon=(pos:complement(944837..944839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04415;product=tRNA-Ser NZ_AP024165.1 RefSeq gene 945013 946821 . - . ID=gene-VA249_RS04420;Name=VA249_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04420;old_locus_tag=VYA_08390 NZ_AP024165.1 Protein Homology CDS 945013 946821 . - 0 ID=cds-WP_221069084.1;Parent=gene-VA249_RS04420;Dbxref=Genbank:WP_221069084.1;Name=WP_221069084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444650.1;locus_tag=VA249_RS04420;product=DUF3413 domain-containing protein;protein_id=WP_221069084.1;transl_table=11 NZ_AP024165.1 RefSeq gene 946844 947071 . - . ID=gene-VA249_RS04425;Name=VA249_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04425;old_locus_tag=VYA_08400 NZ_AP024165.1 Protein Homology CDS 946844 947071 . - 0 ID=cds-WP_128811274.1;Parent=gene-VA249_RS04425;Dbxref=Genbank:WP_128811274.1;Name=WP_128811274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734063.1;locus_tag=VA249_RS04425;product=YejL family protein;protein_id=WP_128811274.1;transl_table=11 NZ_AP024165.1 RefSeq gene 947157 948155 . + . ID=gene-VA249_RS04430;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=VA249_RS04430;old_locus_tag=VYA_08410 NZ_AP024165.1 Protein Homology CDS 947157 948155 . + 0 ID=cds-WP_221069085.1;Parent=gene-VA249_RS04430;Dbxref=Genbank:WP_221069085.1;Name=WP_221069085.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432897.1;locus_tag=VA249_RS04430;product=nucleoid-associated protein YejK;protein_id=WP_221069085.1;transl_table=11 NZ_AP024165.1 RefSeq gene 948312 949613 . + . ID=gene-VA249_RS04435;Name=VA249_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04435;old_locus_tag=VYA_08420 NZ_AP024165.1 Protein Homology CDS 948312 949613 . + 0 ID=cds-WP_225927100.1;Parent=gene-VA249_RS04435;Dbxref=Genbank:WP_225927100.1;Name=WP_225927100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444653.1;locus_tag=VA249_RS04435;product=Hpt domain-containing protein;protein_id=WP_225927100.1;transl_table=11 NZ_AP024165.1 RefSeq gene 949689 950852 . + . ID=gene-VA249_RS04440;Name=VA249_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04440;old_locus_tag=VYA_08430 NZ_AP024165.1 Protein Homology CDS 949689 950852 . + 0 ID=cds-WP_221069086.1;Parent=gene-VA249_RS04440;Dbxref=Genbank:WP_221069086.1;Name=WP_221069086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439710.1;locus_tag=VA249_RS04440;product=chemotaxis protein;protein_id=WP_221069086.1;transl_table=11 NZ_AP024165.1 RefSeq gene 950967 952403 . - . ID=gene-VA249_RS04445;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=VA249_RS04445;old_locus_tag=VYA_08440 NZ_AP024165.1 Protein Homology CDS 950967 952403 . - 0 ID=cds-WP_221069087.1;Parent=gene-VA249_RS04445;Dbxref=Genbank:WP_221069087.1;Name=WP_221069087.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaC;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080917.1;locus_tag=VA249_RS04445;product=Na+/H+ antiporter NhaC;protein_id=WP_221069087.1;transl_table=11 NZ_AP024165.1 RefSeq gene 952842 953972 . + . ID=gene-VA249_RS04450;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=VA249_RS04450;old_locus_tag=VYA_08450 NZ_AP024165.1 Protein Homology CDS 952842 953972 . + 0 ID=cds-WP_221069088.1;Parent=gene-VA249_RS04450;Dbxref=Genbank:WP_221069088.1;Name=WP_221069088.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005473348.1;locus_tag=VA249_RS04450;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_221069088.1;transl_table=11 NZ_AP024165.1 RefSeq gene 954011 954868 . - . ID=gene-VA249_RS04455;Name=VA249_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04455;old_locus_tag=VYA_08460 NZ_AP024165.1 Protein Homology CDS 954011 954868 . - 0 ID=cds-WP_221069089.1;Parent=gene-VA249_RS04455;Dbxref=Genbank:WP_221069089.1;Name=WP_221069089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196360.1;locus_tag=VA249_RS04455;product=ion transporter;protein_id=WP_221069089.1;transl_table=11 NZ_AP024165.1 RefSeq gene 954931 955569 . - . ID=gene-VA249_RS04460;Name=VA249_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04460;old_locus_tag=VYA_08470 NZ_AP024165.1 Protein Homology CDS 954931 955569 . - 0 ID=cds-WP_221069090.1;Parent=gene-VA249_RS04460;Dbxref=Genbank:WP_221069090.1;Name=WP_221069090.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001190426.1;locus_tag=VA249_RS04460;product=YchE family NAAT transporter;protein_id=WP_221069090.1;transl_table=11 NZ_AP024165.1 RefSeq gene 956235 958937 . + . ID=gene-VA249_RS04465;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=VA249_RS04465;old_locus_tag=VYA_08480 NZ_AP024165.1 Protein Homology CDS 956235 958937 . + 0 ID=cds-WP_221069091.1;Parent=gene-VA249_RS04465;Dbxref=Genbank:WP_221069091.1;Name=WP_221069091.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010437105.1;locus_tag=VA249_RS04465;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_221069091.1;transl_table=11 NZ_AP024165.1 RefSeq gene 959098 959787 . - . ID=gene-VA249_RS04470;Name=VA249_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04470 NZ_AP024165.1 Protein Homology CDS 959098 959787 . - 0 ID=cds-WP_221069092.1;Parent=gene-VA249_RS04470;Dbxref=Genbank:WP_221069092.1;Name=WP_221069092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444663.1;locus_tag=VA249_RS04470;product=SDR family oxidoreductase;protein_id=WP_221069092.1;transl_table=11 NZ_AP024165.1 RefSeq gene 959981 960484 . - . ID=gene-VA249_RS04475;Name=VA249_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04475;old_locus_tag=VYA_08500 NZ_AP024165.1 Protein Homology CDS 959981 960484 . - 0 ID=cds-WP_221069093.1;Parent=gene-VA249_RS04475;Dbxref=Genbank:WP_221069093.1;Name=WP_221069093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444664.1;locus_tag=VA249_RS04475;product=hypothetical protein;protein_id=WP_221069093.1;transl_table=11 NZ_AP024165.1 RefSeq gene 960628 961212 . - . ID=gene-VA249_RS04480;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=VA249_RS04480;old_locus_tag=VYA_08510 NZ_AP024165.1 Protein Homology CDS 960628 961212 . - 0 ID=cds-WP_221069094.1;Parent=gene-VA249_RS04480;Dbxref=Genbank:WP_221069094.1;Name=WP_221069094.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008077955.1;locus_tag=VA249_RS04480;product=superoxide dismutase [Fe];protein_id=WP_221069094.1;transl_table=11 NZ_AP024165.1 RefSeq gene 961455 961790 . + . ID=gene-VA249_RS04485;Name=VA249_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04485;old_locus_tag=VYA_08520 NZ_AP024165.1 Protein Homology CDS 961455 961790 . + 0 ID=cds-WP_221069095.1;Parent=gene-VA249_RS04485;Dbxref=Genbank:WP_221069095.1;Name=WP_221069095.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536239.1;locus_tag=VA249_RS04485;product=Grx4 family monothiol glutaredoxin;protein_id=WP_221069095.1;transl_table=11 NZ_AP024165.1 RefSeq gene 962077 964941 . + . ID=gene-VA249_RS04490;Name=VA249_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04490;old_locus_tag=VYA_08530 NZ_AP024165.1 Protein Homology CDS 962077 964941 . + 0 ID=cds-WP_221069096.1;Parent=gene-VA249_RS04490;Dbxref=Genbank:WP_221069096.1;Name=WP_221069096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005594383.1;locus_tag=VA249_RS04490;product=HD domain-containing protein;protein_id=WP_221069096.1;transl_table=11 NZ_AP024165.1 RefSeq gene 965034 966677 . + . ID=gene-VA249_RS04495;Name=VA249_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04495;old_locus_tag=VYA_08540 NZ_AP024165.1 Protein Homology CDS 965034 966677 . + 0 ID=cds-WP_221069097.1;Parent=gene-VA249_RS04495;Dbxref=Genbank:WP_221069097.1;Name=WP_221069097.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195636.1;locus_tag=VA249_RS04495;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_221069097.1;transl_table=11 NZ_AP024165.1 RefSeq gene 966674 968839 . + . ID=gene-VA249_RS04500;Name=VA249_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04500;old_locus_tag=VYA_08550 NZ_AP024165.1 Protein Homology CDS 966674 968839 . + 0 ID=cds-WP_221069098.1;Parent=gene-VA249_RS04500;Dbxref=Genbank:WP_221069098.1;Name=WP_221069098.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006962236.1;locus_tag=VA249_RS04500;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_221069098.1;transl_table=11 NZ_AP024165.1 RefSeq gene 968832 970145 . + . ID=gene-VA249_RS04505;Name=VA249_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04505;old_locus_tag=VYA_08560 NZ_AP024165.1 Protein Homology CDS 968832 970145 . + 0 ID=cds-WP_221069099.1;Parent=gene-VA249_RS04505;Dbxref=Genbank:WP_221069099.1;Name=WP_221069099.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600452.1;locus_tag=VA249_RS04505;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_221069099.1;transl_table=11 NZ_AP024165.1 RefSeq gene 970261 983175 . - . ID=gene-VA249_RS04510;Name=VA249_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04510;old_locus_tag=VYA_08570 NZ_AP024165.1 Protein Homology CDS 970261 983175 . - 0 ID=cds-WP_225927101.1;Parent=gene-VA249_RS04510;Dbxref=Genbank:WP_225927101.1;Name=WP_225927101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008216195.1;locus_tag=VA249_RS04510;product=VCBS domain-containing protein;protein_id=WP_225927101.1;transl_table=11 NZ_AP024165.1 RefSeq gene 983913 984542 . + . ID=gene-VA249_RS04515;Name=VA249_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04515;old_locus_tag=VYA_08580 NZ_AP024165.1 Protein Homology CDS 983913 984542 . + 0 ID=cds-WP_211919732.1;Parent=gene-VA249_RS04515;Dbxref=Genbank:WP_211919732.1;Name=WP_211919732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439695.1;locus_tag=VA249_RS04515;product=DsbA family protein;protein_id=WP_211919732.1;transl_table=11 NZ_AP024165.1 RefSeq gene 984662 985987 . - . ID=gene-VA249_RS04520;Name=VA249_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04520;old_locus_tag=VYA_08590 NZ_AP024165.1 Protein Homology CDS 984662 985987 . - 0 ID=cds-WP_221069100.1;Parent=gene-VA249_RS04520;Dbxref=Genbank:WP_221069100.1;Name=WP_221069100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005490613.1;locus_tag=VA249_RS04520;product=Na+/H+ antiporter family protein;protein_id=WP_221069100.1;transl_table=11 NZ_AP024165.1 RefSeq gene 986016 986660 . - . ID=gene-VA249_RS04525;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=VA249_RS04525;old_locus_tag=VYA_08600 NZ_AP024165.1 Protein Homology CDS 986016 986660 . - 0 ID=cds-WP_221069101.1;Parent=gene-VA249_RS04525;Dbxref=Genbank:WP_221069101.1;Name=WP_221069101.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698519.1;locus_tag=VA249_RS04525;product=ribonuclease T;protein_id=WP_221069101.1;transl_table=11 NZ_AP024165.1 RefSeq gene 987122 988003 . + . ID=gene-VA249_RS04530;Name=VA249_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04530;old_locus_tag=VYA_08610 NZ_AP024165.1 Protein Homology CDS 987122 988003 . + 0 ID=cds-WP_221069102.1;Parent=gene-VA249_RS04530;Dbxref=Genbank:WP_221069102.1;Name=WP_221069102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001045955.1;locus_tag=VA249_RS04530;product=OmpA family protein;protein_id=WP_221069102.1;transl_table=11 NZ_AP024165.1 RefSeq gene 988115 988549 . - . ID=gene-VA249_RS04535;Name=VA249_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04535;old_locus_tag=VYA_08620 NZ_AP024165.1 Protein Homology CDS 988115 988549 . - 0 ID=cds-WP_221069103.1;Parent=gene-VA249_RS04535;Dbxref=Genbank:WP_221069103.1;Name=WP_221069103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439686.1;locus_tag=VA249_RS04535;product=DUF2753 domain-containing protein;protein_id=WP_221069103.1;transl_table=11 NZ_AP024165.1 RefSeq gene 988692 989108 . - . ID=gene-VA249_RS04540;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=VA249_RS04540;old_locus_tag=VYA_08630 NZ_AP024165.1 Protein Homology CDS 988692 989108 . - 0 ID=cds-WP_221069104.1;Parent=gene-VA249_RS04540;Dbxref=Genbank:WP_221069104.1;Name=WP_221069104.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004726653.1;locus_tag=VA249_RS04540;product=lactoylglutathione lyase;protein_id=WP_221069104.1;transl_table=11 NZ_AP024165.1 RefSeq gene 989140 989781 . - . ID=gene-VA249_RS04545;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=VA249_RS04545;old_locus_tag=VYA_08640 NZ_AP024165.1 Protein Homology CDS 989140 989781 . - 0 ID=cds-WP_221069105.1;Parent=gene-VA249_RS04545;Dbxref=Genbank:WP_221069105.1;Name=WP_221069105.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444675.1;locus_tag=VA249_RS04545;product=endonuclease III;protein_id=WP_221069105.1;transl_table=11 NZ_AP024165.1 RefSeq gene 989861 990553 . - . ID=gene-VA249_RS04550;Name=VA249_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04550;old_locus_tag=VYA_08650 NZ_AP024165.1 Protein Homology CDS 989861 990553 . - 0 ID=cds-WP_221069106.1;Parent=gene-VA249_RS04550;Dbxref=Genbank:WP_221069106.1;Name=WP_221069106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536425.1;locus_tag=VA249_RS04550;product=electron transport complex subunit E;protein_id=WP_221069106.1;transl_table=11 NZ_AP024165.1 RefSeq gene 990546 991184 . - . ID=gene-VA249_RS04555;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=VA249_RS04555;old_locus_tag=VYA_08660 NZ_AP024165.1 Protein Homology CDS 990546 991184 . - 0 ID=cds-WP_211919727.1;Parent=gene-VA249_RS04555;Dbxref=Genbank:WP_211919727.1;Name=WP_211919727.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128500.1;locus_tag=VA249_RS04555;product=electron transport complex subunit RsxG;protein_id=WP_211919727.1;transl_table=11 NZ_AP024165.1 RefSeq gene 991192 992238 . - . ID=gene-VA249_RS04560;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=VA249_RS04560;old_locus_tag=VYA_08670 NZ_AP024165.1 Protein Homology CDS 991192 992238 . - 0 ID=cds-WP_128811259.1;Parent=gene-VA249_RS04560;Dbxref=Genbank:WP_128811259.1;Name=WP_128811259.1;Ontology_term=GO:0022900,GO:0055085,GO:0016021;gbkey=CDS;gene=rsxD;go_component=integral component of membrane|0016021||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008220197.1;locus_tag=VA249_RS04560;product=electron transport complex subunit RsxD;protein_id=WP_128811259.1;transl_table=11 NZ_AP024165.1 RefSeq gene 992238 994850 . - . ID=gene-VA249_RS04565;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=VA249_RS04565;old_locus_tag=VYA_08680 NZ_AP024165.1 Protein Homology CDS 992238 994850 . - 0 ID=cds-WP_221069107.1;Parent=gene-VA249_RS04565;Dbxref=Genbank:WP_221069107.1;Name=WP_221069107.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189360.1;locus_tag=VA249_RS04565;product=electron transport complex subunit RsxC;protein_id=WP_221069107.1;transl_table=11 NZ_AP024165.1 RefSeq gene 994859 995452 . - . ID=gene-VA249_RS04570;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=VA249_RS04570;old_locus_tag=VYA_08690 NZ_AP024165.1 Protein Homology CDS 994859 995452 . - 0 ID=cds-WP_128811257.1;Parent=gene-VA249_RS04570;Dbxref=Genbank:WP_128811257.1;Name=WP_128811257.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843484.1;locus_tag=VA249_RS04570;product=electron transport complex subunit RsxB;protein_id=WP_128811257.1;transl_table=11 NZ_AP024165.1 RefSeq gene 995456 996034 . - . ID=gene-VA249_RS04575;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=VA249_RS04575;old_locus_tag=VYA_08700 NZ_AP024165.1 Protein Homology CDS 995456 996034 . - 0 ID=cds-WP_042523119.1;Parent=gene-VA249_RS04575;Dbxref=Genbank:WP_042523119.1;Name=WP_042523119.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734039.1;locus_tag=VA249_RS04575;product=electron transport complex subunit RsxA;protein_id=WP_042523119.1;transl_table=11 NZ_AP024165.1 RefSeq gene 996347 998644 . - . ID=gene-VA249_RS04580;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=VA249_RS04580;old_locus_tag=VYA_08710 NZ_AP024165.1 Protein Homology CDS 996347 998644 . - 0 ID=cds-WP_221069108.1;Parent=gene-VA249_RS04580;Dbxref=Genbank:WP_221069108.1;Name=WP_221069108.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189361.1;locus_tag=VA249_RS04580;product=formate C-acetyltransferase;protein_id=WP_221069108.1;transl_table=11 NZ_AP024165.1 RefSeq gene 999034 999109 . - . ID=gene-VA249_RS04585;Name=VA249_RS04585;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS04585;old_locus_tag=VYA_t00470 NZ_AP024165.1 tRNAscan-SE tRNA 999034 999109 . - . ID=rna-VA249_RS04585;Parent=gene-VA249_RS04585;anticodon=(pos:complement(999074..999076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04585;product=tRNA-Asn NZ_AP024165.1 tRNAscan-SE exon 999034 999109 . - . ID=exon-VA249_RS04585-1;Parent=rna-VA249_RS04585;anticodon=(pos:complement(999074..999076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS04585;product=tRNA-Asn NZ_AP024165.1 RefSeq gene 999668 1001698 . + . ID=gene-VA249_RS04590;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=VA249_RS04590;old_locus_tag=VYA_08720 NZ_AP024165.1 Protein Homology CDS 999668 1001698 . + 0 ID=cds-WP_221069109.1;Parent=gene-VA249_RS04590;Dbxref=Genbank:WP_221069109.1;Name=WP_221069109.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449384.1;locus_tag=VA249_RS04590;product=excinuclease ABC subunit UvrB;protein_id=WP_221069109.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1002005 1003408 . + . ID=gene-VA249_RS04595;Name=VA249_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04595;old_locus_tag=VYA_08730 NZ_AP024165.1 Protein Homology CDS 1002005 1003408 . + 0 ID=cds-WP_221069110.1;Parent=gene-VA249_RS04595;Dbxref=Genbank:WP_221069110.1;Name=WP_221069110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444697.1;locus_tag=VA249_RS04595;product=sigma-54 dependent transcriptional regulator;protein_id=WP_221069110.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1003405 1003749 . + . ID=gene-VA249_RS04600;Name=VA249_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04600;old_locus_tag=VYA_08740 NZ_AP024165.1 Protein Homology CDS 1003405 1003749 . + 0 ID=cds-WP_221069111.1;Parent=gene-VA249_RS04600;Dbxref=Genbank:WP_221069111.1;Name=WP_221069111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196368.1;locus_tag=VA249_RS04600;product=Hpt domain-containing protein;protein_id=WP_221069111.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1003826 1004719 . - . ID=gene-VA249_RS04605;Name=VA249_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04605;old_locus_tag=VYA_08750 NZ_AP024165.1 Protein Homology CDS 1003826 1004719 . - 0 ID=cds-WP_221069112.1;Parent=gene-VA249_RS04605;Dbxref=Genbank:WP_221069112.1;Name=WP_221069112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494500.1;locus_tag=VA249_RS04605;product=YvcK family protein;protein_id=WP_221069112.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 1004893 1005026 . + . ID=id-NZ_AP024165.1:1004893..1005026;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 1005015 1006004 . + . ID=gene-VA249_RS04610;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=VA249_RS04610;old_locus_tag=VYA_08760 NZ_AP024165.1 Protein Homology CDS 1005015 1006004 . + 0 ID=cds-WP_221069113.1;Parent=gene-VA249_RS04610;Dbxref=Genbank:WP_221069113.1;Name=WP_221069113.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004748418.1;locus_tag=VA249_RS04610;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_221069113.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1006101 1006613 . + . ID=gene-VA249_RS04615;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=VA249_RS04615;old_locus_tag=VYA_08770 NZ_AP024165.1 Protein Homology CDS 1006101 1006613 . + 0 ID=cds-WP_128811251.1;Parent=gene-VA249_RS04615;Dbxref=Genbank:WP_128811251.1;Name=WP_128811251.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963014.1;locus_tag=VA249_RS04615;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_128811251.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1006639 1007115 . + . ID=gene-VA249_RS04620;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=VA249_RS04620;old_locus_tag=VYA_08780 NZ_AP024165.1 Protein Homology CDS 1006639 1007115 . + 0 ID=cds-WP_005433216.1;Parent=gene-VA249_RS04620;Dbxref=Genbank:WP_005433216.1;Name=WP_005433216.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444714.1;locus_tag=VA249_RS04620;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_005433216.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1007115 1007372 . + . ID=gene-VA249_RS04625;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=VA249_RS04625;old_locus_tag=VYA_08790 NZ_AP024165.1 Protein Homology CDS 1007115 1007372 . + 0 ID=cds-WP_221069114.1;Parent=gene-VA249_RS04625;Dbxref=Genbank:WP_221069114.1;Name=WP_221069114.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019823606.1;locus_tag=VA249_RS04625;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_221069114.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1007374 1007829 . + . ID=gene-VA249_RS04630;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=VA249_RS04630;old_locus_tag=VYA_08800 NZ_AP024165.1 Protein Homology CDS 1007374 1007829 . + 0 ID=cds-WP_221069115.1;Parent=gene-VA249_RS04630;Dbxref=Genbank:WP_221069115.1;Name=WP_221069115.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439662.1;locus_tag=VA249_RS04630;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_221069115.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1008384 1010015 . + . ID=gene-VA249_RS04635;Name=VA249_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04635;old_locus_tag=VYA_08810 NZ_AP024165.1 Protein Homology CDS 1008384 1010015 . + 0 ID=cds-WP_221069116.1;Parent=gene-VA249_RS04635;Dbxref=Genbank:WP_221069116.1;Name=WP_221069116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848638.1;locus_tag=VA249_RS04635;product=ABC transporter substrate-binding protein;protein_id=WP_221069116.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1010122 1011042 . + . ID=gene-VA249_RS04640;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=VA249_RS04640;old_locus_tag=VYA_08820 NZ_AP024165.1 Protein Homology CDS 1010122 1011042 . + 0 ID=cds-WP_211919717.1;Parent=gene-VA249_RS04640;Dbxref=Genbank:WP_211919717.1;Name=WP_211919717.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001907465.1;locus_tag=VA249_RS04640;product=oligopeptide ABC transporter permease OppB;protein_id=WP_211919717.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1011058 1011960 . + . ID=gene-VA249_RS04645;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=VA249_RS04645;old_locus_tag=VYA_08830 NZ_AP024165.1 Protein Homology CDS 1011058 1011960 . + 0 ID=cds-WP_221069117.1;Parent=gene-VA249_RS04645;Dbxref=Genbank:WP_221069117.1;Name=WP_221069117.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013572108.1;locus_tag=VA249_RS04645;product=oligopeptide ABC transporter permease OppC;protein_id=WP_221069117.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1011991 1012962 . + . ID=gene-VA249_RS04650;Name=VA249_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04650;old_locus_tag=VYA_08840 NZ_AP024165.1 Protein Homology CDS 1011991 1012962 . + 0 ID=cds-WP_009707275.1;Parent=gene-VA249_RS04650;Dbxref=Genbank:WP_009707275.1;Name=WP_009707275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013572107.1;locus_tag=VA249_RS04650;product=ABC transporter ATP-binding protein;protein_id=WP_009707275.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1012959 1013951 . + . ID=gene-VA249_RS04655;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=VA249_RS04655;old_locus_tag=VYA_08850 NZ_AP024165.1 Protein Homology CDS 1012959 1013951 . + 0 ID=cds-WP_221069118.1;Parent=gene-VA249_RS04655;Dbxref=Genbank:WP_221069118.1;Name=WP_221069118.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645709.1;locus_tag=VA249_RS04655;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_221069118.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1014192 1015220 . + . ID=gene-VA249_RS04660;Name=VA249_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04660;old_locus_tag=VYA_08860 NZ_AP024165.1 Protein Homology CDS 1014192 1015220 . + 0 ID=cds-WP_221069119.1;Parent=gene-VA249_RS04660;Dbxref=Genbank:WP_221069119.1;Name=WP_221069119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009387051.1;locus_tag=VA249_RS04660;product=extracellular solute-binding protein;protein_id=WP_221069119.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1015220 1016263 . + . ID=gene-VA249_RS04665;Name=VA249_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04665;old_locus_tag=VYA_08870 NZ_AP024165.1 Protein Homology CDS 1015220 1016263 . + 0 ID=cds-WP_221069120.1;Parent=gene-VA249_RS04665;Dbxref=Genbank:WP_221069120.1;Name=WP_221069120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003112424.1;locus_tag=VA249_RS04665;product=histone deacetylase family protein;protein_id=WP_221069120.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1016454 1017398 . + . ID=gene-VA249_RS04670;Name=VA249_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04670;old_locus_tag=VYA_08880 NZ_AP024165.1 Protein Homology CDS 1016454 1017398 . + 0 ID=cds-WP_221069121.1;Parent=gene-VA249_RS04670;Dbxref=Genbank:WP_221069121.1;Name=WP_221069121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817838.1;locus_tag=VA249_RS04670;product=glutathione S-transferase family protein;protein_id=WP_221069121.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1017599 1018873 . + . ID=gene-VA249_RS04675;Name=VA249_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04675;old_locus_tag=VYA_08890 NZ_AP024165.1 Protein Homology CDS 1017599 1018873 . + 0 ID=cds-WP_221069122.1;Parent=gene-VA249_RS04675;Dbxref=Genbank:WP_221069122.1;Name=WP_221069122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817839.1;locus_tag=VA249_RS04675;product=MgtC/SapB family protein;protein_id=WP_221069122.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1018965 1021130 . - . ID=gene-VA249_RS04680;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=VA249_RS04680;old_locus_tag=VYA_08900 NZ_AP024165.1 Protein Homology CDS 1018965 1021130 . - 0 ID=cds-WP_128811239.1;Parent=gene-VA249_RS04680;Dbxref=Genbank:WP_128811239.1;Name=WP_128811239.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004414499.1;locus_tag=VA249_RS04680;product=phosphate acetyltransferase;protein_id=WP_128811239.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1021265 1022461 . - . ID=gene-VA249_RS04685;Name=VA249_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04685;old_locus_tag=VYA_08910 NZ_AP024165.1 Protein Homology CDS 1021265 1022461 . - 0 ID=cds-WP_221069123.1;Parent=gene-VA249_RS04685;Dbxref=Genbank:WP_221069123.1;Name=WP_221069123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128482.1;locus_tag=VA249_RS04685;product=acetate kinase;protein_id=WP_221069123.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1022807 1023259 . + . ID=gene-VA249_RS04690;Name=VA249_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04690;old_locus_tag=VYA_08920 NZ_AP024165.1 Protein Homology CDS 1022807 1023259 . + 0 ID=cds-WP_211919708.1;Parent=gene-VA249_RS04690;Dbxref=Genbank:WP_211919708.1;Name=WP_211919708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080095.1;locus_tag=VA249_RS04690;product=DUF412 domain-containing protein;protein_id=WP_211919708.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1023702 1024667 . + . ID=gene-VA249_RS04695;Name=VA249_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04695;old_locus_tag=VYA_08930 NZ_AP024165.1 Protein Homology CDS 1023702 1024667 . + 0 ID=cds-WP_221069813.1;Parent=gene-VA249_RS04695;Dbxref=Genbank:WP_221069813.1;Name=WP_221069813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531426.1;locus_tag=VA249_RS04695;product=ABC transporter substrate-binding protein;protein_id=WP_221069813.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1024738 1025673 . + . ID=gene-VA249_RS04700;Name=VA249_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04700;old_locus_tag=VYA_08940 NZ_AP024165.1 Protein Homology CDS 1024738 1025673 . + 0 ID=cds-WP_221069124.1;Parent=gene-VA249_RS04700;Dbxref=Genbank:WP_221069124.1;Name=WP_221069124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494525.1;locus_tag=VA249_RS04700;product=ABC transporter permease;protein_id=WP_221069124.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1025670 1026464 . + . ID=gene-VA249_RS04705;Name=VA249_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04705;old_locus_tag=VYA_08950 NZ_AP024165.1 Protein Homology CDS 1025670 1026464 . + 0 ID=cds-WP_221069125.1;Parent=gene-VA249_RS04705;Dbxref=Genbank:WP_221069125.1;Name=WP_221069125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020428792.1;locus_tag=VA249_RS04705;product=ABC transporter ATP-binding protein;protein_id=WP_221069125.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1026605 1028430 . + . ID=gene-VA249_RS04710;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=pseudogene;locus_tag=VA249_RS04710;old_locus_tag=VYA_08960;pseudo=true NZ_AP024165.1 Protein Homology CDS 1026605 1028430 . + 0 ID=cds-VA249_RS04710;Parent=gene-VA249_RS04710;Note=frameshifted;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461488.1;locus_tag=VA249_RS04710;product=maltodextrin glucosidase;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1028542 1030002 . + . ID=gene-VA249_RS04715;Name=VA249_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04715;old_locus_tag=VYA_08980 NZ_AP024165.1 Protein Homology CDS 1028542 1030002 . + 0 ID=cds-WP_221069126.1;Parent=gene-VA249_RS04715;Dbxref=Genbank:WP_221069126.1;Name=WP_221069126.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531434.1;locus_tag=VA249_RS04715;product=diguanylate cyclase;protein_id=WP_221069126.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1030103 1031062 . - . ID=gene-VA249_RS04720;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=VA249_RS04720;old_locus_tag=VYA_08990 NZ_AP024165.1 Protein Homology CDS 1030103 1031062 . - 0 ID=cds-WP_128811234.1;Parent=gene-VA249_RS04720;Dbxref=Genbank:WP_128811234.1;Name=WP_128811234.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444756.1;locus_tag=VA249_RS04720;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_128811234.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1031219 1031842 . + . ID=gene-VA249_RS04725;Name=VA249_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04725;old_locus_tag=VYA_09000 NZ_AP024165.1 Protein Homology CDS 1031219 1031842 . + 0 ID=cds-WP_221069127.1;Parent=gene-VA249_RS04725;Dbxref=Genbank:WP_221069127.1;Name=WP_221069127.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645698.1;locus_tag=VA249_RS04725;product=SEC-C metal-binding domain-containing protein;protein_id=WP_221069127.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1032117 1032653 . - . ID=gene-VA249_RS04730;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=VA249_RS04730;old_locus_tag=VYA_09010 NZ_AP024165.1 Protein Homology CDS 1032117 1032653 . - 0 ID=cds-WP_221069128.1;Parent=gene-VA249_RS04730;Dbxref=Genbank:WP_221069128.1;Name=WP_221069128.1;Ontology_term=GO:0006457,GO:0015035,GO:0016021;gbkey=CDS;gene=dsbB;go_component=integral component of membrane|0016021||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433241.1;locus_tag=VA249_RS04730;product=disulfide bond formation protein DsbB;protein_id=WP_221069128.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1032739 1034325 . - . ID=gene-VA249_RS04735;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=VA249_RS04735;old_locus_tag=VYA_09020 NZ_AP024165.1 Protein Homology CDS 1032739 1034325 . - 0 ID=cds-WP_128811231.1;Parent=gene-VA249_RS04735;Dbxref=Genbank:WP_128811231.1;Name=WP_128811231.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaB;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006878806.1;locus_tag=VA249_RS04735;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_128811231.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1034968 1035807 . + . ID=gene-VA249_RS04740;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=VA249_RS04740;old_locus_tag=VYA_09030 NZ_AP024165.1 Protein Homology CDS 1034968 1035807 . + 0 ID=cds-WP_211919699.1;Parent=gene-VA249_RS04740;Dbxref=Genbank:WP_211919699.1;Name=WP_211919699.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848622.1;locus_tag=VA249_RS04740;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_211919699.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1035977 1036783 . - . ID=gene-VA249_RS04745;Name=VA249_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04745;old_locus_tag=VYA_09040 NZ_AP024165.1 Protein Homology CDS 1035977 1036783 . - 0 ID=cds-WP_221069129.1;Parent=gene-VA249_RS04745;Dbxref=Genbank:WP_221069129.1;Name=WP_221069129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433243.1;locus_tag=VA249_RS04745;product=hypothetical protein;protein_id=WP_221069129.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1036996 1039071 . - . ID=gene-VA249_RS04750;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=VA249_RS04750;old_locus_tag=VYA_09050 NZ_AP024165.1 Protein Homology CDS 1036996 1039071 . - 0 ID=cds-WP_221069130.1;Parent=gene-VA249_RS04750;Dbxref=Genbank:WP_221069130.1;Name=WP_221069130.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196386.1;locus_tag=VA249_RS04750;product=methionine--tRNA ligase;protein_id=WP_221069130.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1039266 1040342 . + . ID=gene-VA249_RS04755;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=VA249_RS04755;old_locus_tag=VYA_09060 NZ_AP024165.1 Protein Homology CDS 1039266 1040342 . + 0 ID=cds-WP_221069131.1;Parent=gene-VA249_RS04755;Dbxref=Genbank:WP_221069131.1;Name=WP_221069131.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196387.1;locus_tag=VA249_RS04755;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_221069131.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1040524 1041165 . + . ID=gene-VA249_RS04760;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=VA249_RS04760;old_locus_tag=VYA_09070 NZ_AP024165.1 Protein Homology CDS 1040524 1041165 . + 0 ID=cds-WP_128811227.1;Parent=gene-VA249_RS04760;Dbxref=Genbank:WP_128811227.1;Name=WP_128811227.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002539180.1;locus_tag=VA249_RS04760;product=uridine kinase;protein_id=WP_128811227.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1041356 1043443 . + . ID=gene-VA249_RS04765;Name=VA249_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04765;old_locus_tag=VYA_09080 NZ_AP024165.1 Protein Homology CDS 1041356 1043443 . + 0 ID=cds-WP_221069132.1;Parent=gene-VA249_RS04765;Dbxref=Genbank:WP_221069132.1;Name=WP_221069132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433229.1;locus_tag=VA249_RS04765;product=AsmA family protein;protein_id=WP_221069132.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1043584 1044189 . - . ID=gene-VA249_RS04770;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=VA249_RS04770;old_locus_tag=VYA_09090 NZ_AP024165.1 Protein Homology CDS 1043584 1044189 . - 0 ID=cds-WP_221069133.1;Parent=gene-VA249_RS04770;Dbxref=Genbank:WP_221069133.1;Name=WP_221069133.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633848.1;locus_tag=VA249_RS04770;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_221069133.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1044289 1044738 . + . ID=gene-VA249_RS04775;Name=VA249_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04775;old_locus_tag=VYA_09100 NZ_AP024165.1 Protein Homology CDS 1044289 1044738 . + 0 ID=cds-WP_221069134.1;Parent=gene-VA249_RS04775;Dbxref=Genbank:WP_221069134.1;Name=WP_221069134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196390.1;locus_tag=VA249_RS04775;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_221069134.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1044815 1046374 . - . ID=gene-VA249_RS04780;Name=VA249_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04780;old_locus_tag=VYA_09110 NZ_AP024165.1 Protein Homology CDS 1044815 1046374 . - 0 ID=cds-WP_211919692.1;Parent=gene-VA249_RS04780;Dbxref=Genbank:WP_211919692.1;Name=WP_211919692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080828.1;locus_tag=VA249_RS04780;product=SulP family inorganic anion transporter;protein_id=WP_211919692.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1046688 1049831 . - . ID=gene-VA249_RS04785;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=VA249_RS04785;old_locus_tag=VYA_09120 NZ_AP024165.1 Protein Homology CDS 1046688 1049831 . - 0 ID=cds-WP_221069135.1;Parent=gene-VA249_RS04785;Dbxref=Genbank:WP_221069135.1;Name=WP_221069135.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461594.1;locus_tag=VA249_RS04785;product=ribonuclease E;protein_id=WP_221069135.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1050462 1051424 . + . ID=gene-VA249_RS04790;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=VA249_RS04790;old_locus_tag=VYA_09130 NZ_AP024165.1 Protein Homology CDS 1050462 1051424 . + 0 ID=cds-WP_221069136.1;Parent=gene-VA249_RS04790;Dbxref=Genbank:WP_221069136.1;Name=WP_221069136.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006881233.1;locus_tag=VA249_RS04790;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_221069136.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1051612 1052193 . - . ID=gene-VA249_RS04795;Name=VA249_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04795;old_locus_tag=VYA_09140 NZ_AP024165.1 Protein Homology CDS 1051612 1052193 . - 0 ID=cds-WP_221069137.1;Parent=gene-VA249_RS04795;Dbxref=Genbank:WP_221069137.1;Name=WP_221069137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439594.1;locus_tag=VA249_RS04795;product=Maf-like protein;protein_id=WP_221069137.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1052343 1052867 . + . ID=gene-VA249_RS04800;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=VA249_RS04800;old_locus_tag=VYA_09150 NZ_AP024165.1 Protein Homology CDS 1052343 1052867 . + 0 ID=cds-WP_128811220.1;Parent=gene-VA249_RS04800;Dbxref=Genbank:WP_128811220.1;Name=WP_128811220.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174442.1;locus_tag=VA249_RS04800;product=23S rRNA accumulation protein YceD;protein_id=WP_128811220.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1052924 1053094 . + . ID=gene-VA249_RS04805;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=VA249_RS04805;old_locus_tag=VYA_09160 NZ_AP024165.1 Protein Homology CDS 1052924 1053094 . + 0 ID=cds-WP_004414666.1;Parent=gene-VA249_RS04805;Dbxref=Genbank:WP_004414666.1;Name=WP_004414666.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006231206.1;locus_tag=VA249_RS04805;product=50S ribosomal protein L32;protein_id=WP_004414666.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1053105 1054130 . + . ID=gene-VA249_RS04810;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=VA249_RS04810;old_locus_tag=VYA_09170 NZ_AP024165.1 Protein Homology CDS 1053105 1054130 . + 0 ID=cds-WP_128811219.1;Parent=gene-VA249_RS04810;Dbxref=Genbank:WP_128811219.1;Name=WP_128811219.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180565.1;locus_tag=VA249_RS04810;product=phosphate acyltransferase PlsX;protein_id=WP_128811219.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1054136 1055086 . + . ID=gene-VA249_RS04815;Name=VA249_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04815;old_locus_tag=VYA_09180 NZ_AP024165.1 Protein Homology CDS 1054136 1055086 . + 0 ID=cds-WP_221069138.1;Parent=gene-VA249_RS04815;Dbxref=Genbank:WP_221069138.1;Name=WP_221069138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232493.1;locus_tag=VA249_RS04815;product=ketoacyl-ACP synthase III;protein_id=WP_221069138.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1055163 1056086 . + . ID=gene-VA249_RS04820;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=VA249_RS04820;old_locus_tag=VYA_09190 NZ_AP024165.1 Protein Homology CDS 1055163 1056086 . + 0 ID=cds-WP_221069139.1;Parent=gene-VA249_RS04820;Dbxref=Genbank:WP_221069139.1;Name=WP_221069139.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017102823.1;locus_tag=VA249_RS04820;product=ACP S-malonyltransferase;protein_id=WP_221069139.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1056121 1056855 . + . ID=gene-VA249_RS04825;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=VA249_RS04825;old_locus_tag=VYA_09200 NZ_AP024165.1 Protein Homology CDS 1056121 1056855 . + 0 ID=cds-WP_164837254.1;Parent=gene-VA249_RS04825;Dbxref=Genbank:WP_164837254.1;Name=WP_164837254.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002023219.1;locus_tag=VA249_RS04825;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_164837254.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1057101 1057334 . + . ID=gene-VA249_RS04830;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=VA249_RS04830;old_locus_tag=VYA_09210 NZ_AP024165.1 Protein Homology CDS 1057101 1057334 . + 0 ID=cds-WP_004406112.1;Parent=gene-VA249_RS04830;Dbxref=Genbank:WP_004406112.1;Name=WP_004406112.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065129.1;locus_tag=VA249_RS04830;product=acyl carrier protein;protein_id=WP_004406112.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1057428 1058678 . + . ID=gene-VA249_RS04835;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=VA249_RS04835;old_locus_tag=VYA_09220 NZ_AP024165.1 Protein Homology CDS 1057428 1058678 . + 0 ID=cds-WP_221069140.1;Parent=gene-VA249_RS04835;Dbxref=Genbank:WP_221069140.1;Name=WP_221069140.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444811.1;locus_tag=VA249_RS04835;product=beta-ketoacyl-ACP synthase II;protein_id=WP_221069140.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1058788 1059603 . + . ID=gene-VA249_RS04840;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=VA249_RS04840;old_locus_tag=VYA_09230 NZ_AP024165.1 Protein Homology CDS 1058788 1059603 . + 0 ID=cds-WP_221069141.1;Parent=gene-VA249_RS04840;Dbxref=Genbank:WP_221069141.1;Name=WP_221069141.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196397.1;locus_tag=VA249_RS04840;product=aminodeoxychorismate lyase;protein_id=WP_221069141.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1059600 1060616 . + . ID=gene-VA249_RS04845;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=VA249_RS04845;old_locus_tag=VYA_09240 NZ_AP024165.1 Protein Homology CDS 1059600 1060616 . + 0 ID=cds-WP_128811214.1;Parent=gene-VA249_RS04845;Dbxref=Genbank:WP_128811214.1;Name=WP_128811214.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444816.1;locus_tag=VA249_RS04845;product=endolytic transglycosylase MltG;protein_id=WP_128811214.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1060613 1061245 . + . ID=gene-VA249_RS04850;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=VA249_RS04850;old_locus_tag=VYA_09250 NZ_AP024165.1 Protein Homology CDS 1060613 1061245 . + 0 ID=cds-WP_221069142.1;Parent=gene-VA249_RS04850;Dbxref=Genbank:WP_221069142.1;Name=WP_221069142.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736557.1;locus_tag=VA249_RS04850;product=dTMP kinase;protein_id=WP_221069142.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1061270 1062232 . + . ID=gene-VA249_RS04855;Name=VA249_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04855;old_locus_tag=VYA_09260 NZ_AP024165.1 Protein Homology CDS 1061270 1062232 . + 0 ID=cds-WP_221069143.1;Parent=gene-VA249_RS04855;Dbxref=Genbank:WP_221069143.1;Name=WP_221069143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645671.1;locus_tag=VA249_RS04855;product=DNA polymerase III subunit delta';protein_id=WP_221069143.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1062223 1062998 . + . ID=gene-VA249_RS04860;Name=VA249_RS04860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS04860;pseudo=true NZ_AP024165.1 Protein Homology CDS 1062223 1062998 . + 0 ID=cds-VA249_RS04860;Parent=gene-VA249_RS04860;Note=frameshifted;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013856412.1;locus_tag=VA249_RS04860;product=YchF/TatD family DNA exonuclease;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1063434 1064864 . + . ID=gene-VA249_RS04865;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=VA249_RS04865;old_locus_tag=VYA_09290 NZ_AP024165.1 Protein Homology CDS 1063434 1064864 . + 0 ID=cds-WP_221069144.1;Parent=gene-VA249_RS04865;Dbxref=Genbank:WP_221069144.1;Name=WP_221069144.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736562.1;locus_tag=VA249_RS04865;product=PTS glucose transporter subunit IIBC;protein_id=WP_221069144.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1065175 1065576 . + . ID=gene-VA249_RS04870;Name=VA249_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04870;old_locus_tag=VYA_09300 NZ_AP024165.1 Protein Homology CDS 1065175 1065576 . + 0 ID=cds-WP_221069145.1;Parent=gene-VA249_RS04870;Dbxref=Genbank:WP_221069145.1;Name=WP_221069145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425675.1;locus_tag=VA249_RS04870;product=hypothetical protein;protein_id=WP_221069145.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1065667 1066257 . - . ID=gene-VA249_RS04875;Name=VA249_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04875;old_locus_tag=VYA_09310 NZ_AP024165.1 Protein Homology CDS 1065667 1066257 . - 0 ID=cds-WP_221069146.1;Parent=gene-VA249_RS04875;Dbxref=Genbank:WP_221069146.1;Name=WP_221069146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453954.1;locus_tag=VA249_RS04875;product=outer membrane beta-barrel protein;protein_id=WP_221069146.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1066384 1066476 . + . ID=gene-VA249_RS04880;Name=VA249_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04880 NZ_AP024165.1 Protein Homology CDS 1066384 1066476 . + 0 ID=cds-WP_128811207.1;Parent=gene-VA249_RS04880;Dbxref=Genbank:WP_128811207.1;Name=WP_128811207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005372970.1;locus_tag=VA249_RS04880;product=YnhF family membrane protein;protein_id=WP_128811207.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1066494 1067639 . + . ID=gene-VA249_RS04885;Name=VA249_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04885;old_locus_tag=VYA_09320 NZ_AP024165.1 Protein Homology CDS 1066494 1067639 . + 0 ID=cds-WP_221069147.1;Parent=gene-VA249_RS04885;Dbxref=Genbank:WP_221069147.1;Name=WP_221069147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444837.1;locus_tag=VA249_RS04885;product=DUF6363 domain-containing protein;protein_id=WP_221069147.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1067878 1069320 . - . ID=gene-VA249_RS04890;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=VA249_RS04890;old_locus_tag=VYA_09330 NZ_AP024165.1 Protein Homology CDS 1067878 1069320 . - 0 ID=cds-WP_221069148.1;Parent=gene-VA249_RS04890;Dbxref=Genbank:WP_221069148.1;Name=WP_221069148.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196406.1;locus_tag=VA249_RS04890;product=pyruvate kinase;protein_id=WP_221069148.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1069628 1070845 . + . ID=gene-VA249_RS04895;Name=VA249_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04895;old_locus_tag=VYA_09340 NZ_AP024165.1 Protein Homology CDS 1069628 1070845 . + 0 ID=cds-WP_221069149.1;Parent=gene-VA249_RS04895;Dbxref=Genbank:WP_221069149.1;Name=WP_221069149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080805.1;locus_tag=VA249_RS04895;product=ROK family protein;protein_id=WP_221069149.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1071108 1072061 . + . ID=gene-VA249_RS04900;Name=VA249_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04900;old_locus_tag=VYA_09350 NZ_AP024165.1 Protein Homology CDS 1071108 1072061 . + 0 ID=cds-WP_221069150.1;Parent=gene-VA249_RS04900;Dbxref=Genbank:WP_221069150.1;Name=WP_221069150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453945.1;locus_tag=VA249_RS04900;product=chemotaxis protein CheV;protein_id=WP_221069150.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1072358 1075432 . - . ID=gene-VA249_RS04905;Name=VA249_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04905;old_locus_tag=VYA_09360 NZ_AP024165.1 Protein Homology CDS 1072358 1075432 . - 0 ID=cds-WP_221069151.1;Parent=gene-VA249_RS04905;Dbxref=Genbank:WP_221069151.1;Name=WP_221069151.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080803.1;locus_tag=VA249_RS04905;product=error-prone DNA polymerase;protein_id=WP_221069151.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1075481 1076884 . - . ID=gene-VA249_RS04910;Name=VA249_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04910;old_locus_tag=VYA_09370 NZ_AP024165.1 Protein Homology CDS 1075481 1076884 . - 0 ID=cds-WP_221069152.1;Parent=gene-VA249_RS04910;Dbxref=Genbank:WP_221069152.1;Name=WP_221069152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743159.1;locus_tag=VA249_RS04910;product=DNA polymerase Y family protein;protein_id=WP_221069152.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1076889 1077581 . - . ID=gene-VA249_RS04915;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=VA249_RS04915;old_locus_tag=VYA_09380 NZ_AP024165.1 Protein Homology CDS 1076889 1077581 . - 0 ID=cds-WP_221069153.1;Parent=gene-VA249_RS04915;Dbxref=Genbank:WP_221069153.1;Name=WP_221069153.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707012.1;locus_tag=VA249_RS04915;product=translesion DNA synthesis-associated protein ImuA;protein_id=WP_221069153.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1077712 1078452 . - . ID=gene-VA249_RS04920;Name=VA249_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04920;old_locus_tag=VYA_09390 NZ_AP024165.1 Protein Homology CDS 1077712 1078452 . - 0 ID=cds-WP_221069154.1;Parent=gene-VA249_RS04920;Dbxref=Genbank:WP_221069154.1;Name=WP_221069154.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737398.1;locus_tag=VA249_RS04920;product=YciK family oxidoreductase;protein_id=WP_221069154.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1078766 1079827 . + . ID=gene-VA249_RS04925;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=VA249_RS04925;old_locus_tag=VYA_09400 NZ_AP024165.1 Protein Homology CDS 1078766 1079827 . + 0 ID=cds-WP_221069155.1;Parent=gene-VA249_RS04925;Dbxref=Genbank:WP_221069155.1;Name=WP_221069155.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533592.1;locus_tag=VA249_RS04925;product=protease SohB;protein_id=WP_221069155.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1080040 1080720 . + . ID=gene-VA249_RS04930;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=VA249_RS04930;old_locus_tag=VYA_09410 NZ_AP024165.1 Protein Homology CDS 1080040 1080720 . + 0 ID=cds-WP_128811200.1;Parent=gene-VA249_RS04930;Dbxref=Genbank:WP_128811200.1;Name=WP_128811200.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444854.1;locus_tag=VA249_RS04930;product=(d)CMP kinase;protein_id=WP_128811200.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1080831 1082495 . + . ID=gene-VA249_RS04935;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=VA249_RS04935;old_locus_tag=VYA_09420 NZ_AP024165.1 Protein Homology CDS 1080831 1082495 . + 0 ID=cds-WP_221069156.1;Parent=gene-VA249_RS04935;Dbxref=Genbank:WP_221069156.1;Name=WP_221069156.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=VA249_RS04935;product=30S ribosomal protein S1;protein_id=WP_221069156.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1082708 1082992 . + . ID=gene-VA249_RS04940;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=VA249_RS04940;old_locus_tag=VYA_09430 NZ_AP024165.1 Protein Homology CDS 1082708 1082992 . + 0 ID=cds-WP_005438967.1;Parent=gene-VA249_RS04940;Dbxref=Genbank:WP_005438967.1;Name=WP_005438967.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431133.1;locus_tag=VA249_RS04940;product=integration host factor subunit beta;protein_id=WP_005438967.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1083133 1083426 . + . ID=gene-VA249_RS04945;Name=VA249_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04945;old_locus_tag=VYA_09440 NZ_AP024165.1 Protein Homology CDS 1083133 1083426 . + 0 ID=cds-WP_221069157.1;Parent=gene-VA249_RS04945;Dbxref=Genbank:WP_221069157.1;Name=WP_221069157.1;Ontology_term=GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431104.1;locus_tag=VA249_RS04945;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_221069157.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1083445 1084620 . + . ID=gene-VA249_RS04950;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=VA249_RS04950;old_locus_tag=VYA_09450 NZ_AP024165.1 Protein Homology CDS 1083445 1084620 . + 0 ID=cds-WP_211919671.1;Parent=gene-VA249_RS04950;Dbxref=Genbank:WP_211919671.1;Name=WP_211919671.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002053082.1;locus_tag=VA249_RS04950;product=lipopolysaccharide assembly protein LapB;protein_id=WP_211919671.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1084715 1085416 . + . ID=gene-VA249_RS04955;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=VA249_RS04955;old_locus_tag=VYA_09460 NZ_AP024165.1 Protein Homology CDS 1084715 1085416 . + 0 ID=cds-WP_221069158.1;Parent=gene-VA249_RS04955;Dbxref=Genbank:WP_221069158.1;Name=WP_221069158.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817860.1;locus_tag=VA249_RS04955;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_221069158.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1085841 1087688 . + . ID=gene-VA249_RS04960;Name=VA249_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04960;old_locus_tag=VYA_09470 NZ_AP024165.1 Protein Homology CDS 1085841 1087688 . + 0 ID=cds-WP_128811197.1;Parent=gene-VA249_RS04960;Dbxref=Genbank:WP_128811197.1;Name=WP_128811197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444862.1;locus_tag=VA249_RS04960;product=extracellular solute-binding protein;protein_id=WP_128811197.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1087823 1088062 . - . ID=gene-VA249_RS04965;Name=VA249_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04965;old_locus_tag=VYA_09480 NZ_AP024165.1 Protein Homology CDS 1087823 1088062 . - 0 ID=cds-WP_128811196.1;Parent=gene-VA249_RS04965;Dbxref=Genbank:WP_128811196.1;Name=WP_128811196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444872.1;locus_tag=VA249_RS04965;product=hypothetical protein;protein_id=WP_128811196.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1088225 1089004 . - . ID=gene-VA249_RS04970;Name=VA249_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04970;old_locus_tag=VYA_09490 NZ_AP024165.1 Protein Homology CDS 1088225 1089004 . - 0 ID=cds-WP_221069159.1;Parent=gene-VA249_RS04970;Dbxref=Genbank:WP_221069159.1;Name=WP_221069159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707005.1;locus_tag=VA249_RS04970;product=hypothetical protein;protein_id=WP_221069159.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1089237 1089629 . + . ID=gene-VA249_RS04975;Name=VA249_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04975;old_locus_tag=VYA_09500 NZ_AP024165.1 Protein Homology CDS 1089237 1089629 . + 0 ID=cds-WP_221069160.1;Parent=gene-VA249_RS04975;Dbxref=Genbank:WP_221069160.1;Name=WP_221069160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439689.1;locus_tag=VA249_RS04975;product=DUF4345 family protein;protein_id=WP_221069160.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1089724 1090293 . - . ID=gene-VA249_RS04980;Name=VA249_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04980;old_locus_tag=VYA_09510 NZ_AP024165.1 Protein Homology CDS 1089724 1090293 . - 0 ID=cds-WP_221069161.1;Parent=gene-VA249_RS04980;Dbxref=Genbank:WP_221069161.1;Name=WP_221069161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844295.1;locus_tag=VA249_RS04980;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_221069161.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1090293 1091939 . - . ID=gene-VA249_RS04985;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=VA249_RS04985;old_locus_tag=VYA_09520 NZ_AP024165.1 Protein Homology CDS 1090293 1091939 . - 0 ID=cds-WP_221069162.1;Parent=gene-VA249_RS04985;Dbxref=Genbank:WP_221069162.1;Name=WP_221069162.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197188.1;locus_tag=VA249_RS04985;product=intermembrane transport protein PqiB;protein_id=WP_221069162.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1091932 1093263 . - . ID=gene-VA249_RS04990;Name=VA249_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04990;old_locus_tag=VYA_09530 NZ_AP024165.1 Protein Homology CDS 1091932 1093263 . - 0 ID=cds-WP_221069163.1;Parent=gene-VA249_RS04990;Dbxref=Genbank:WP_221069163.1;Name=WP_221069163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448374.1;locus_tag=VA249_RS04990;product=paraquat-inducible protein A;protein_id=WP_221069163.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1093410 1094417 . - . ID=gene-VA249_RS04995;Name=VA249_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS04995;old_locus_tag=VYA_09540 NZ_AP024165.1 Protein Homology CDS 1093410 1094417 . - 0 ID=cds-WP_221069164.1;Parent=gene-VA249_RS04995;Dbxref=Genbank:WP_221069164.1;Name=WP_221069164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017421793.1;locus_tag=VA249_RS04995;product=substrate-binding domain-containing protein;protein_id=WP_221069164.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1094617 1097709 . - . ID=gene-VA249_RS05000;Name=VA249_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05000;old_locus_tag=VYA_09550 NZ_AP024165.1 Protein Homology CDS 1094617 1097709 . - 0 ID=cds-WP_221069165.1;Parent=gene-VA249_RS05000;Dbxref=Genbank:WP_221069165.1;Name=WP_221069165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706988.1;locus_tag=VA249_RS05000;product=beta-galactosidase;protein_id=WP_221069165.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1097800 1098675 . - . ID=gene-VA249_RS05005;Name=VA249_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05005;old_locus_tag=VYA_09560 NZ_AP024165.1 Protein Homology CDS 1097800 1098675 . - 0 ID=cds-WP_221069166.1;Parent=gene-VA249_RS05005;Dbxref=Genbank:WP_221069166.1;Name=WP_221069166.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019820911.1;locus_tag=VA249_RS05005;product=MalM family protein;protein_id=WP_221069166.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1098745 1099986 . - . ID=gene-VA249_RS05010;Name=VA249_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05010;old_locus_tag=VYA_09570 NZ_AP024165.1 Protein Homology CDS 1098745 1099986 . - 0 ID=cds-WP_221069167.1;Parent=gene-VA249_RS05010;Dbxref=Genbank:WP_221069167.1;Name=WP_221069167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438917.1;locus_tag=VA249_RS05010;product=carbohydrate porin;protein_id=WP_221069167.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1100890 1103007 . + . ID=gene-VA249_RS05015;Name=VA249_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05015;old_locus_tag=VYA_09580 NZ_AP024165.1 Protein Homology CDS 1100890 1103007 . + 0 ID=cds-WP_221069168.1;Parent=gene-VA249_RS05015;Dbxref=Genbank:WP_221069168.1;Name=WP_221069168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234549.1;locus_tag=VA249_RS05015;product=alpha-galactosidase;protein_id=WP_221069168.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1103383 1104756 . + . ID=gene-VA249_RS05020;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=VA249_RS05020;old_locus_tag=VYA_09590 NZ_AP024165.1 Protein Homology CDS 1103383 1104756 . + 0 ID=cds-WP_221069169.1;Parent=gene-VA249_RS05020;Dbxref=Genbank:WP_221069169.1;Name=WP_221069169.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016021;gbkey=CDS;gene=melB;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010437169.1;locus_tag=VA249_RS05020;product=melibiose:sodium transporter MelB;protein_id=WP_221069169.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1104858 1105757 . - . ID=gene-VA249_RS05025;Name=VA249_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05025;old_locus_tag=VYA_09600 NZ_AP024165.1 Protein Homology CDS 1104858 1105757 . - 0 ID=cds-WP_221069170.1;Parent=gene-VA249_RS05025;Dbxref=Genbank:WP_221069170.1;Name=WP_221069170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447380.1;locus_tag=VA249_RS05025;product=LysR family transcriptional regulator;protein_id=WP_221069170.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1105897 1106295 . + . ID=gene-VA249_RS05030;Name=VA249_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05030;old_locus_tag=VYA_09610 NZ_AP024165.1 Protein Homology CDS 1105897 1106295 . + 0 ID=cds-WP_225923926.1;Parent=gene-VA249_RS05030;Dbxref=Genbank:WP_225923926.1;Name=WP_225923926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817867.1;locus_tag=VA249_RS05030;product=hypothetical protein;protein_id=WP_225923926.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1106351 1108564 . + . ID=gene-VA249_RS05035;Name=VA249_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05035;old_locus_tag=VYA_09620 NZ_AP024165.1 Protein Homology CDS 1106351 1108564 . + 0 ID=cds-WP_225927102.1;Parent=gene-VA249_RS05035;Dbxref=Genbank:WP_225927102.1;Name=WP_225927102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817868.1;locus_tag=VA249_RS05035;product=protein-disulfide reductase DsbD family protein;protein_id=WP_225927102.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1108561 1109073 . + . ID=gene-VA249_RS05040;Name=VA249_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05040;old_locus_tag=VYA_09630 NZ_AP024165.1 Protein Homology CDS 1108561 1109073 . + 0 ID=cds-WP_221069171.1;Parent=gene-VA249_RS05040;Dbxref=Genbank:WP_221069171.1;Name=WP_221069171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706980.1;locus_tag=VA249_RS05040;product=protein disulfide oxidoreductase;protein_id=WP_221069171.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1109334 1109690 . + . ID=gene-VA249_RS05045;Name=VA249_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05045;old_locus_tag=VYA_09640 NZ_AP024165.1 Protein Homology CDS 1109334 1109690 . + 0 ID=cds-WP_221069172.1;Parent=gene-VA249_RS05045;Dbxref=Genbank:WP_221069172.1;Name=WP_221069172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444911.1;locus_tag=VA249_RS05045;product=hypothetical protein;protein_id=WP_221069172.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1109702 1110025 . + . ID=gene-VA249_RS05050;Name=VA249_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05050;old_locus_tag=VYA_09650 NZ_AP024165.1 Protein Homology CDS 1109702 1110025 . + 0 ID=cds-WP_221069173.1;Parent=gene-VA249_RS05050;Dbxref=Genbank:WP_221069173.1;Name=WP_221069173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698450.1;locus_tag=VA249_RS05050;product=helix-turn-helix domain-containing protein;protein_id=WP_221069173.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1110168 1111838 . - . ID=gene-VA249_RS05055;Name=VA249_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05055;old_locus_tag=VYA_09660 NZ_AP024165.1 GeneMarkS-2+ CDS 1110168 1111838 . - 0 ID=cds-WP_221069174.1;Parent=gene-VA249_RS05055;Dbxref=Genbank:WP_221069174.1;Name=WP_221069174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05055;product=hypothetical protein;protein_id=WP_221069174.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1112153 1113118 . + . ID=gene-VA249_RS05060;Name=VA249_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05060;old_locus_tag=VYA_09670 NZ_AP024165.1 GeneMarkS-2+ CDS 1112153 1113118 . + 0 ID=cds-WP_221069175.1;Parent=gene-VA249_RS05060;Dbxref=Genbank:WP_221069175.1;Name=WP_221069175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05060;product=hypothetical protein;protein_id=WP_221069175.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1113108 1115657 . + . ID=gene-VA249_RS05065;Name=VA249_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05065;old_locus_tag=VYA_09680 NZ_AP024165.1 GeneMarkS-2+ CDS 1113108 1115657 . + 0 ID=cds-WP_221069176.1;Parent=gene-VA249_RS05065;Dbxref=Genbank:WP_221069176.1;Name=WP_221069176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05065;product=hypothetical protein;protein_id=WP_221069176.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1115654 1115839 . + . ID=gene-VA249_RS05070;Name=VA249_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05070;old_locus_tag=VYA_09690 NZ_AP024165.1 GeneMarkS-2+ CDS 1115654 1115839 . + 0 ID=cds-WP_221069177.1;Parent=gene-VA249_RS05070;Dbxref=Genbank:WP_221069177.1;Name=WP_221069177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05070;product=hypothetical protein;protein_id=WP_221069177.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1115839 1116171 . + . ID=gene-VA249_RS05075;Name=VA249_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05075;old_locus_tag=VYA_09700 NZ_AP024165.1 GeneMarkS-2+ CDS 1115839 1116171 . + 0 ID=cds-WP_221069178.1;Parent=gene-VA249_RS05075;Dbxref=Genbank:WP_221069178.1;Name=WP_221069178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05075;product=hypothetical protein;protein_id=WP_221069178.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1116307 1117332 . - . ID=gene-VA249_RS05080;Name=VA249_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05080;old_locus_tag=VYA_09710 NZ_AP024165.1 Protein Homology CDS 1116307 1117332 . - 0 ID=cds-WP_221069179.1;Parent=gene-VA249_RS05080;Dbxref=Genbank:WP_221069179.1;Name=WP_221069179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004412084.1;locus_tag=VA249_RS05080;product=DUF2955 domain-containing protein;protein_id=WP_221069179.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1117342 1118406 . - . ID=gene-VA249_RS05085;Name=VA249_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05085;old_locus_tag=VYA_09720 NZ_AP024165.1 Protein Homology CDS 1117342 1118406 . - 0 ID=cds-WP_221069180.1;Parent=gene-VA249_RS05085;Dbxref=Genbank:WP_221069180.1;Name=WP_221069180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820498.1;locus_tag=VA249_RS05085;product=HlyD family secretion protein;protein_id=WP_221069180.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1118521 1119381 . + . ID=gene-VA249_RS05090;Name=VA249_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05090;old_locus_tag=VYA_09730 NZ_AP024165.1 Protein Homology CDS 1118521 1119381 . + 0 ID=cds-WP_221069181.1;Parent=gene-VA249_RS05090;Dbxref=Genbank:WP_221069181.1;Name=WP_221069181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189412.1;locus_tag=VA249_RS05090;product=LysR substrate-binding domain-containing protein;protein_id=WP_221069181.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1119494 1120036 . + . ID=gene-VA249_RS05095;Name=VA249_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05095;old_locus_tag=VYA_09740 NZ_AP024165.1 Protein Homology CDS 1119494 1120036 . + 0 ID=cds-WP_221069182.1;Parent=gene-VA249_RS05095;Dbxref=Genbank:WP_221069182.1;Name=WP_221069182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494679.1;locus_tag=VA249_RS05095;product=hydrolase;protein_id=WP_221069182.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1120136 1121032 . - . ID=gene-VA249_RS05100;Name=VA249_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05100;old_locus_tag=VYA_09750 NZ_AP024165.1 Protein Homology CDS 1120136 1121032 . - 0 ID=cds-WP_221069183.1;Parent=gene-VA249_RS05100;Dbxref=Genbank:WP_221069183.1;Name=WP_221069183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435007.1;locus_tag=VA249_RS05100;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_221069183.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1121278 1122516 . + . ID=gene-VA249_RS05105;Name=VA249_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05105;old_locus_tag=VYA_09760 NZ_AP024165.1 Protein Homology CDS 1121278 1122516 . + 0 ID=cds-WP_221069184.1;Parent=gene-VA249_RS05105;Dbxref=Genbank:WP_221069184.1;Name=WP_221069184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817881.1;locus_tag=VA249_RS05105;product=protein kinase;protein_id=WP_221069184.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1122656 1123942 . - . ID=gene-VA249_RS05110;Name=VA249_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05110;old_locus_tag=VYA_09770 NZ_AP024165.1 Protein Homology CDS 1122656 1123942 . - 0 ID=cds-WP_221069185.1;Parent=gene-VA249_RS05110;Dbxref=Genbank:WP_221069185.1;Name=WP_221069185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634708.1;locus_tag=VA249_RS05110;product=HAMP domain-containing histidine kinase;protein_id=WP_221069185.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1123939 1124616 . - . ID=gene-VA249_RS05115;Name=VA249_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05115;old_locus_tag=VYA_09780 NZ_AP024165.1 Protein Homology CDS 1123939 1124616 . - 0 ID=cds-WP_221069186.1;Parent=gene-VA249_RS05115;Dbxref=Genbank:WP_221069186.1;Name=WP_221069186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431155.1;locus_tag=VA249_RS05115;product=response regulator transcription factor;protein_id=WP_221069186.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1124774 1125814 . + . ID=gene-VA249_RS05120;Name=VA249_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05120;old_locus_tag=VYA_09790 NZ_AP024165.1 Protein Homology CDS 1124774 1125814 . + 0 ID=cds-WP_221069187.1;Parent=gene-VA249_RS05120;Dbxref=Genbank:WP_221069187.1;Name=WP_221069187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005389367.1;locus_tag=VA249_RS05120;product=glycosyltransferase family 2 protein;protein_id=WP_221069187.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1125817 1127223 . + . ID=gene-VA249_RS05125;Name=VA249_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05125;old_locus_tag=VYA_09800 NZ_AP024165.1 Protein Homology CDS 1125817 1127223 . + 0 ID=cds-WP_221069188.1;Parent=gene-VA249_RS05125;Dbxref=Genbank:WP_221069188.1;Name=WP_221069188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376754.1;locus_tag=VA249_RS05125;product=glycosyltransferase family 39 protein;protein_id=WP_221069188.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1127227 1127607 . + . ID=gene-VA249_RS05130;Name=VA249_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05130;old_locus_tag=VYA_09810 NZ_AP024165.1 Protein Homology CDS 1127227 1127607 . + 0 ID=cds-WP_221069189.1;Parent=gene-VA249_RS05130;Dbxref=Genbank:WP_221069189.1;Name=WP_221069189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431157.1;locus_tag=VA249_RS05130;product=GtrA family protein;protein_id=WP_221069189.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1128092 1130188 . + . ID=gene-VA249_RS05135;Name=VA249_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05135;old_locus_tag=VYA_09820 NZ_AP024165.1 Protein Homology CDS 1128092 1130188 . + 0 ID=cds-WP_221069190.1;Parent=gene-VA249_RS05135;Dbxref=Genbank:WP_221069190.1;Name=WP_221069190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017111470.1;locus_tag=VA249_RS05135;product=methyl-accepting chemotaxis protein;protein_id=WP_221069190.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1130679 1131344 . + . ID=gene-VA249_RS05140;Name=VA249_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05140;old_locus_tag=VYA_09830 NZ_AP024165.1 Protein Homology CDS 1130679 1131344 . + 0 ID=cds-WP_206513190.1;Parent=gene-VA249_RS05140;Dbxref=Genbank:WP_206513190.1;Name=WP_206513190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008221822.1;locus_tag=VA249_RS05140;product=PAS domain-containing protein;protein_id=WP_206513190.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1131378 1131761 . + . ID=gene-VA249_RS05145;Name=VA249_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05145;old_locus_tag=VYA_09840 NZ_AP024165.1 Protein Homology CDS 1131378 1131761 . + 0 ID=cds-WP_128811165.1;Parent=gene-VA249_RS05145;Dbxref=Genbank:WP_128811165.1;Name=WP_128811165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012601059.1;locus_tag=VA249_RS05145;product=RidA family protein;protein_id=WP_128811165.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1131802 1133208 . + . ID=gene-VA249_RS05150;Name=VA249_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05150;old_locus_tag=VYA_09850 NZ_AP024165.1 Protein Homology CDS 1131802 1133208 . + 0 ID=cds-WP_221069191.1;Parent=gene-VA249_RS05150;Dbxref=Genbank:WP_221069191.1;Name=WP_221069191.1;Ontology_term=GO:0015293,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004414916.1;locus_tag=VA249_RS05150;product=cation:dicarboxylase symporter family transporter;protein_id=WP_221069191.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1133285 1134607 . + . ID=gene-VA249_RS05155;Name=VA249_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05155;old_locus_tag=VYA_09860 NZ_AP024165.1 Protein Homology CDS 1133285 1134607 . + 0 ID=cds-WP_221069192.1;Parent=gene-VA249_RS05155;Dbxref=Genbank:WP_221069192.1;Name=WP_221069192.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128362.1;locus_tag=VA249_RS05155;product=CoA-disulfide reductase;protein_id=WP_221069192.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1134708 1137137 . - . ID=gene-VA249_RS05160;Name=VA249_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05160;old_locus_tag=VYA_09870 NZ_AP024165.1 Protein Homology CDS 1134708 1137137 . - 0 ID=cds-WP_221069193.1;Parent=gene-VA249_RS05160;Dbxref=Genbank:WP_221069193.1;Name=WP_221069193.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197894.1;locus_tag=VA249_RS05160;product=YgiQ family radical SAM protein;protein_id=WP_221069193.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1137552 1140053 . + . ID=gene-VA249_RS05165;Name=VA249_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05165;old_locus_tag=VYA_09880 NZ_AP024165.1 Protein Homology CDS 1137552 1140053 . + 0 ID=cds-WP_225927103.1;Parent=gene-VA249_RS05165;Dbxref=Genbank:WP_225927103.1;Name=WP_225927103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197893.1;locus_tag=VA249_RS05165;product=EAL domain-containing protein;protein_id=WP_225927103.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1140129 1140839 . + . ID=gene-VA249_RS05170;Name=VA249_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05170;old_locus_tag=VYA_09890 NZ_AP024165.1 Protein Homology CDS 1140129 1140839 . + 0 ID=cds-WP_221069194.1;Parent=gene-VA249_RS05170;Dbxref=Genbank:WP_221069194.1;Name=WP_221069194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434986.1;locus_tag=VA249_RS05170;product=hypothetical protein;protein_id=WP_221069194.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1141007 1141207 . + . ID=gene-VA249_RS05175;Name=VA249_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05175;old_locus_tag=VYA_09900 NZ_AP024165.1 Protein Homology CDS 1141007 1141207 . + 0 ID=cds-WP_128811161.1;Parent=gene-VA249_RS05175;Dbxref=Genbank:WP_128811161.1;Name=WP_128811161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009846421.1;locus_tag=VA249_RS05175;product=DUF4250 domain-containing protein;protein_id=WP_128811161.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1141228 1142139 . - . ID=gene-VA249_RS05180;Name=VA249_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05180;old_locus_tag=VYA_09910 NZ_AP024165.1 Protein Homology CDS 1141228 1142139 . - 0 ID=cds-WP_221069195.1;Parent=gene-VA249_RS05180;Dbxref=Genbank:WP_221069195.1;Name=WP_221069195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020327687.1;locus_tag=VA249_RS05180;product=LysR substrate-binding domain-containing protein;protein_id=WP_221069195.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1142415 1144700 . + . ID=gene-VA249_RS05185;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=VA249_RS05185;old_locus_tag=VYA_09920 NZ_AP024165.1 Protein Homology CDS 1142415 1144700 . + 0 ID=cds-WP_221069196.1;Parent=gene-VA249_RS05185;Dbxref=Genbank:WP_221069196.1;Name=WP_221069196.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434982.1;locus_tag=VA249_RS05185;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_221069196.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1144820 1145221 . - . ID=gene-VA249_RS05190;Name=VA249_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05190;old_locus_tag=VYA_09930 NZ_AP024165.1 Protein Homology CDS 1144820 1145221 . - 0 ID=cds-WP_221069197.1;Parent=gene-VA249_RS05190;Dbxref=Genbank:WP_221069197.1;Name=WP_221069197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434979.1;locus_tag=VA249_RS05190;product=type II secretion system pilot lipoprotein GspS-beta;protein_id=WP_221069197.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1145225 1145521 . - . ID=gene-VA249_RS05195;Name=VA249_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05195;old_locus_tag=VYA_09940 NZ_AP024165.1 Protein Homology CDS 1145225 1145521 . - 0 ID=cds-WP_211919603.1;Parent=gene-VA249_RS05195;Dbxref=Genbank:WP_211919603.1;Name=WP_211919603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000270412.1;locus_tag=VA249_RS05195;product=YciI family protein;protein_id=WP_211919603.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1145642 1146037 . - . ID=gene-VA249_RS05200;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=VA249_RS05200;old_locus_tag=VYA_09950 NZ_AP024165.1 Protein Homology CDS 1145642 1146037 . - 0 ID=cds-WP_128811156.1;Parent=gene-VA249_RS05200;Dbxref=Genbank:WP_128811156.1;Name=WP_128811156.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706926.1;locus_tag=VA249_RS05200;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_128811156.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1146275 1146802 . - . ID=gene-VA249_RS05205;Name=VA249_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05205;old_locus_tag=VYA_09960 NZ_AP024165.1 Protein Homology CDS 1146275 1146802 . - 0 ID=cds-WP_221069198.1;Parent=gene-VA249_RS05205;Dbxref=Genbank:WP_221069198.1;Name=WP_221069198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080875.1;locus_tag=VA249_RS05205;product=septation protein A;protein_id=WP_221069198.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1146989 1148250 . - . ID=gene-VA249_RS05210;Name=VA249_RS05210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS05210;old_locus_tag=VYA_09970;pseudo=true NZ_AP024165.1 Protein Homology CDS 1146989 1148250 . - 0 ID=cds-VA249_RS05210;Parent=gene-VA249_RS05210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275907.1;locus_tag=VA249_RS05210;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1148587 1149393 . - . ID=gene-VA249_RS05215;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=VA249_RS05215;old_locus_tag=VYA_09990 NZ_AP024165.1 Protein Homology CDS 1148587 1149393 . - 0 ID=cds-WP_128811153.1;Parent=gene-VA249_RS05215;Dbxref=Genbank:WP_128811153.1;Name=WP_128811153.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004729802.1;locus_tag=VA249_RS05215;product=tryptophan synthase subunit alpha;protein_id=WP_128811153.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1149393 1150583 . - . ID=gene-VA249_RS05220;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=VA249_RS05220;old_locus_tag=VYA_10000 NZ_AP024165.1 Protein Homology CDS 1149393 1150583 . - 0 ID=cds-WP_211919593.1;Parent=gene-VA249_RS05220;Dbxref=Genbank:WP_211919593.1;Name=WP_211919593.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017631791.1;locus_tag=VA249_RS05220;product=tryptophan synthase subunit beta;protein_id=WP_211919593.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1150648 1152087 . - . ID=gene-VA249_RS05225;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=VA249_RS05225;old_locus_tag=VYA_10010 NZ_AP024165.1 Protein Homology CDS 1150648 1152087 . - 0 ID=cds-WP_221069199.1;Parent=gene-VA249_RS05225;Dbxref=Genbank:WP_221069199.1;Name=WP_221069199.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434964.1;locus_tag=VA249_RS05225;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_221069199.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1152101 1153111 . - . ID=gene-VA249_RS05230;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=VA249_RS05230;old_locus_tag=VYA_10020 NZ_AP024165.1 Protein Homology CDS 1152101 1153111 . - 0 ID=cds-WP_104024714.1;Parent=gene-VA249_RS05230;Dbxref=Genbank:WP_104024714.1;Name=WP_104024714.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376784.1;locus_tag=VA249_RS05230;product=anthranilate phosphoribosyltransferase;protein_id=WP_104024714.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1153149 1153757 . - . ID=gene-VA249_RS05235;Name=VA249_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05235;old_locus_tag=VYA_10030 NZ_AP024165.1 Protein Homology CDS 1153149 1153757 . - 0 ID=cds-WP_221069200.1;Parent=gene-VA249_RS05235;Dbxref=Genbank:WP_221069200.1;Name=WP_221069200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743304.1;locus_tag=VA249_RS05235;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_221069200.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1153774 1155339 . - . ID=gene-VA249_RS05240;Name=VA249_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05240;old_locus_tag=VYA_10040 NZ_AP024165.1 Protein Homology CDS 1153774 1155339 . - 0 ID=cds-WP_221069201.1;Parent=gene-VA249_RS05240;Dbxref=Genbank:WP_221069201.1;Name=WP_221069201.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635723.1;locus_tag=VA249_RS05240;product=anthranilate synthase component 1;protein_id=WP_221069201.1;transl_table=11 NZ_AP024165.1 cmsearch sequence_feature 1155465 1155568 . - . ID=id-NZ_AP024165.1:1155465..1155568;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_AP024165.1 RefSeq gene 1155515 1155640 . - . ID=gene-VA249_RS05245;Name=VA249_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05245 NZ_AP024165.1 Protein Homology CDS 1155515 1155640 . - 0 ID=cds-WP_128811148.1;Parent=gene-VA249_RS05245;Dbxref=Genbank:WP_128811148.1;Name=WP_128811148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445052.1;locus_tag=VA249_RS05245;product=Trp operon leader peptide;protein_id=WP_128811148.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1155736 1156605 . + . ID=gene-VA249_RS05250;Name=VA249_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05250;old_locus_tag=VYA_10050 NZ_AP024165.1 Protein Homology CDS 1155736 1156605 . + 0 ID=cds-WP_211919581.1;Parent=gene-VA249_RS05250;Dbxref=Genbank:WP_211919581.1;Name=WP_211919581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431205.1;locus_tag=VA249_RS05250;product=PHP domain-containing protein;protein_id=WP_211919581.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1156643 1157263 . + . ID=gene-VA249_RS05255;Name=VA249_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05255;old_locus_tag=VYA_10060 NZ_AP024165.1 Protein Homology CDS 1156643 1157263 . + 0 ID=cds-WP_211919579.1;Parent=gene-VA249_RS05255;Dbxref=Genbank:WP_211919579.1;Name=WP_211919579.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004395461.1;locus_tag=VA249_RS05255;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_211919579.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1157549 1158487 . + . ID=gene-VA249_RS05260;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=VA249_RS05260;old_locus_tag=VYA_10070 NZ_AP024165.1 Protein Homology CDS 1157549 1158487 . + 0 ID=cds-WP_211919577.1;Parent=gene-VA249_RS05260;Dbxref=Genbank:WP_211919577.1;Name=WP_211919577.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431207.1;locus_tag=VA249_RS05260;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_211919577.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1158724 1159044 . - . ID=gene-VA249_RS05265;Name=VA249_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05265;old_locus_tag=VYA_10080 NZ_AP024165.1 Protein Homology CDS 1158724 1159044 . - 0 ID=cds-WP_128811144.1;Parent=gene-VA249_RS05265;Dbxref=Genbank:WP_128811144.1;Name=WP_128811144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376800.1;locus_tag=VA249_RS05265;product=HI1450 family dsDNA-mimic protein;protein_id=WP_128811144.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1159047 1159613 . - . ID=gene-VA249_RS05270;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=VA249_RS05270;old_locus_tag=VYA_10090 NZ_AP024165.1 Protein Homology CDS 1159047 1159613 . - 0 ID=cds-WP_128811143.1;Parent=gene-VA249_RS05270;Dbxref=Genbank:WP_128811143.1;Name=WP_128811143.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001123593.1;locus_tag=VA249_RS05270;product=elongation factor P-like protein YeiP;protein_id=WP_128811143.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1159800 1160567 . + . ID=gene-VA249_RS05275;Name=VA249_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05275;old_locus_tag=VYA_10100 NZ_AP024165.1 Protein Homology CDS 1159800 1160567 . + 0 ID=cds-WP_221069202.1;Parent=gene-VA249_RS05275;Dbxref=Genbank:WP_221069202.1;Name=WP_221069202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012604335.1;locus_tag=VA249_RS05275;product=nucleotidyltransferase domain-containing protein;protein_id=WP_221069202.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1160624 1162987 . - . ID=gene-VA249_RS05280;Name=VA249_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05280;old_locus_tag=VYA_10110 NZ_AP024165.1 Protein Homology CDS 1160624 1162987 . - 0 ID=cds-WP_221069203.1;Parent=gene-VA249_RS05280;Dbxref=Genbank:WP_221069203.1;Name=WP_221069203.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848866.1;locus_tag=VA249_RS05280;product=DNA polymerase II;protein_id=WP_221069203.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1163611 1164255 . + . ID=gene-VA249_RS05285;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=VA249_RS05285;old_locus_tag=VYA_10130 NZ_AP024165.1 Protein Homology CDS 1163611 1164255 . + 0 ID=cds-WP_128811140.1;Parent=gene-VA249_RS05285;Dbxref=Genbank:WP_128811140.1;Name=WP_128811140.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017033557.1;locus_tag=VA249_RS05285;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_128811140.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1164257 1166089 . + . ID=gene-VA249_RS05290;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=VA249_RS05290;old_locus_tag=VYA_10140 NZ_AP024165.1 Protein Homology CDS 1164257 1166089 . + 0 ID=cds-WP_128811139.1;Parent=gene-VA249_RS05290;Dbxref=Genbank:WP_128811139.1;Name=WP_128811139.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017094482.1;locus_tag=VA249_RS05290;product=excinuclease ABC subunit UvrC;protein_id=WP_128811139.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1166136 1166693 . + . ID=gene-VA249_RS05295;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=VA249_RS05295;old_locus_tag=VYA_10150 NZ_AP024165.1 Protein Homology CDS 1166136 1166693 . + 0 ID=cds-WP_128811138.1;Parent=gene-VA249_RS05295;Dbxref=Genbank:WP_128811138.1;Name=WP_128811138.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211978.1;locus_tag=VA249_RS05295;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_128811138.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1167094 1167167 . + . ID=gene-VA249_RS05300;Name=VA249_RS05300;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS05300;old_locus_tag=VYA_t00480 NZ_AP024165.1 tRNAscan-SE tRNA 1167094 1167167 . + . ID=rna-VA249_RS05300;Parent=gene-VA249_RS05300;anticodon=(pos:1167126..1167128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05300;product=tRNA-Cys NZ_AP024165.1 tRNAscan-SE exon 1167094 1167167 . + . ID=exon-VA249_RS05300-1;Parent=rna-VA249_RS05300;anticodon=(pos:1167126..1167128);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05300;product=tRNA-Cys NZ_AP024165.1 RefSeq gene 1167202 1167277 . + . ID=gene-VA249_RS05305;Name=VA249_RS05305;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS05305;old_locus_tag=VYA_t00490 NZ_AP024165.1 tRNAscan-SE tRNA 1167202 1167277 . + . ID=rna-VA249_RS05305;Parent=gene-VA249_RS05305;anticodon=(pos:1167235..1167237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05305;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 1167202 1167277 . + . ID=exon-VA249_RS05305-1;Parent=rna-VA249_RS05305;anticodon=(pos:1167235..1167237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05305;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 1167358 1167444 . + . ID=gene-VA249_RS05310;Name=VA249_RS05310;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS05310;old_locus_tag=VYA_t00500 NZ_AP024165.1 tRNAscan-SE tRNA 1167358 1167444 . + . ID=rna-VA249_RS05310;Parent=gene-VA249_RS05310;anticodon=(pos:1167392..1167394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05310;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 1167358 1167444 . + . ID=exon-VA249_RS05310-1;Parent=rna-VA249_RS05310;anticodon=(pos:1167392..1167394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05310;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 1167456 1167531 . + . ID=gene-VA249_RS05315;Name=VA249_RS05315;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS05315;old_locus_tag=VYA_t00510 NZ_AP024165.1 tRNAscan-SE tRNA 1167456 1167531 . + . ID=rna-VA249_RS05315;Parent=gene-VA249_RS05315;anticodon=(pos:1167489..1167491);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05315;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 1167456 1167531 . + . ID=exon-VA249_RS05315-1;Parent=rna-VA249_RS05315;anticodon=(pos:1167489..1167491);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS05315;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 1168307 1171198 . + . ID=gene-VA249_RS05320;Name=VA249_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05320;old_locus_tag=VYA_10160 NZ_AP024165.1 Protein Homology CDS 1168307 1171198 . + 0 ID=cds-WP_221069204.1;Parent=gene-VA249_RS05320;Dbxref=Genbank:WP_221069204.1;Name=WP_221069204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430655.1;locus_tag=VA249_RS05320;product=pyridoxal phosphate-dependent class III aminotransferase;protein_id=WP_221069204.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1171217 1172470 . + . ID=gene-VA249_RS05325;Name=VA249_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05325;old_locus_tag=VYA_10170 NZ_AP024165.1 Protein Homology CDS 1171217 1172470 . + 0 ID=cds-WP_005430654.1;Parent=gene-VA249_RS05325;Dbxref=Genbank:WP_005430654.1;Name=WP_005430654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004401072.1;locus_tag=VA249_RS05325;product=saccharopine dehydrogenase family protein;protein_id=WP_005430654.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1172618 1173751 . + . ID=gene-VA249_RS05330;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=VA249_RS05330;old_locus_tag=VYA_10180 NZ_AP024165.1 Protein Homology CDS 1172618 1173751 . + 0 ID=cds-WP_221069205.1;Parent=gene-VA249_RS05330;Dbxref=Genbank:WP_221069205.1;Name=WP_221069205.1;Ontology_term=GO:0008216,GO:0016831;gbkey=CDS;gene=nspC;go_function=carboxy-lyase activity|0016831||IEA;go_process=spermidine metabolic process|0008216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445080.1;locus_tag=VA249_RS05330;product=carboxynorspermidine decarboxylase;protein_id=WP_221069205.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1173866 1174378 . - . ID=gene-VA249_RS05335;Name=VA249_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05335;old_locus_tag=VYA_10190 NZ_AP024165.1 Protein Homology CDS 1173866 1174378 . - 0 ID=cds-WP_128811134.1;Parent=gene-VA249_RS05335;Dbxref=Genbank:WP_128811134.1;Name=WP_128811134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636131.1;locus_tag=VA249_RS05335;product=transcriptional regulator;protein_id=WP_128811134.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1174628 1175530 . - . ID=gene-VA249_RS05340;Name=VA249_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05340;old_locus_tag=VYA_10200 NZ_AP024165.1 Protein Homology CDS 1174628 1175530 . - 0 ID=cds-WP_221069818.1;Parent=gene-VA249_RS05340;Dbxref=Genbank:WP_221069818.1;Name=WP_221069818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196488.1;locus_tag=VA249_RS05340;product=DUF3943 domain-containing protein;protein_id=WP_221069818.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1175794 1177026 . + . ID=gene-VA249_RS05345;Name=VA249_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05345;old_locus_tag=VYA_10210 NZ_AP024165.1 Protein Homology CDS 1175794 1177026 . + 0 ID=cds-WP_221069206.1;Parent=gene-VA249_RS05345;Dbxref=Genbank:WP_221069206.1;Name=WP_221069206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189454.1;locus_tag=VA249_RS05345;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_221069206.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1177116 1177394 . - . ID=gene-VA249_RS05350;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=VA249_RS05350;old_locus_tag=VYA_10220 NZ_AP024165.1 Protein Homology CDS 1177116 1177394 . - 0 ID=cds-WP_128811132.1;Parent=gene-VA249_RS05350;Dbxref=Genbank:WP_128811132.1;Name=WP_128811132.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017065632.1;locus_tag=VA249_RS05350;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_128811132.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1177394 1178527 . - . ID=gene-VA249_RS05355;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=VA249_RS05355;old_locus_tag=VYA_10230 NZ_AP024165.1 Protein Homology CDS 1177394 1178527 . - 0 ID=cds-WP_128811131.1;Parent=gene-VA249_RS05355;Dbxref=Genbank:WP_128811131.1;Name=WP_128811131.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017422332.1;locus_tag=VA249_RS05355;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_128811131.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1178610 1180892 . - . ID=gene-VA249_RS05360;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=VA249_RS05360;old_locus_tag=VYA_10240 NZ_AP024165.1 Protein Homology CDS 1178610 1180892 . - 0 ID=cds-WP_211919557.1;Parent=gene-VA249_RS05360;Dbxref=Genbank:WP_211919557.1;Name=WP_211919557.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004395359.1;locus_tag=VA249_RS05360;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_211919557.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1181444 1182157 . - . ID=gene-VA249_RS05365;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=VA249_RS05365;old_locus_tag=VYA_10250 NZ_AP024165.1 Protein Homology CDS 1181444 1182157 . - 0 ID=cds-WP_221069208.1;Parent=gene-VA249_RS05365;Dbxref=Genbank:WP_221069208.1;Name=WP_221069208.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430651.1;locus_tag=VA249_RS05365;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_221069208.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1182467 1185109 . + . ID=gene-VA249_RS05370;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=VA249_RS05370;old_locus_tag=VYA_10260 NZ_AP024165.1 Protein Homology CDS 1182467 1185109 . + 0 ID=cds-WP_221069210.1;Parent=gene-VA249_RS05370;Dbxref=Genbank:WP_221069210.1;Name=WP_221069210.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443375.1;locus_tag=VA249_RS05370;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_221069210.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1185232 1185855 . + . ID=gene-VA249_RS05375;Name=VA249_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05375;old_locus_tag=VYA_10270 NZ_AP024165.1 Protein Homology CDS 1185232 1185855 . + 0 ID=cds-WP_221069212.1;Parent=gene-VA249_RS05375;Dbxref=Genbank:WP_221069212.1;Name=WP_221069212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394779.1;locus_tag=VA249_RS05375;product=tetratricopeptide repeat protein;protein_id=WP_221069212.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1186033 1186599 . + . ID=gene-VA249_RS05380;Name=VA249_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05380;old_locus_tag=VYA_10280 NZ_AP024165.1 Protein Homology CDS 1186033 1186599 . + 0 ID=cds-WP_221069214.1;Parent=gene-VA249_RS05380;Dbxref=Genbank:WP_221069214.1;Name=WP_221069214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376825.1;locus_tag=VA249_RS05380;product=hypothetical protein;protein_id=WP_221069214.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1186961 1187137 . + . ID=gene-VA249_RS05385;Name=VA249_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05385;old_locus_tag=VYA_10290 NZ_AP024165.1 Protein Homology CDS 1186961 1187137 . + 0 ID=cds-WP_221069216.1;Parent=gene-VA249_RS05385;Dbxref=Genbank:WP_221069216.1;Name=WP_221069216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020480909.1;locus_tag=VA249_RS05385;product=hypothetical protein;protein_id=WP_221069216.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1187369 1188016 . + . ID=gene-VA249_RS05390;Name=VA249_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05390;old_locus_tag=VYA_10300 NZ_AP024165.1 Protein Homology CDS 1187369 1188016 . + 0 ID=cds-WP_221069218.1;Parent=gene-VA249_RS05390;Dbxref=Genbank:WP_221069218.1;Name=WP_221069218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189463.1;locus_tag=VA249_RS05390;product=GTP cyclohydrolase II;protein_id=WP_221069218.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1188358 1189902 . + . ID=gene-VA249_RS05395;Name=VA249_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05395;old_locus_tag=VYA_10310 NZ_AP024165.1 Protein Homology CDS 1188358 1189902 . + 0 ID=cds-WP_221069820.1;Parent=gene-VA249_RS05395;Dbxref=Genbank:WP_221069820.1;Name=WP_221069820.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196506.1;locus_tag=VA249_RS05395;product=L%2CD-transpeptidase family protein;protein_id=WP_221069820.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1190267 1190821 . + . ID=gene-VA249_RS05400;Name=VA249_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05400;old_locus_tag=VYA_10320 NZ_AP024165.1 Protein Homology CDS 1190267 1190821 . + 0 ID=cds-WP_128811122.1;Parent=gene-VA249_RS05400;Dbxref=Genbank:WP_128811122.1;Name=WP_128811122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820459.1;locus_tag=VA249_RS05400;product=DUF882 domain-containing protein;protein_id=WP_128811122.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1190949 1191605 . + . ID=gene-VA249_RS05405;Name=VA249_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05405;old_locus_tag=VYA_10330 NZ_AP024165.1 Protein Homology CDS 1190949 1191605 . + 0 ID=cds-WP_221069220.1;Parent=gene-VA249_RS05405;Dbxref=Genbank:WP_221069220.1;Name=WP_221069220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017044781.1;locus_tag=VA249_RS05405;product=MBL fold metallo-hydrolase;protein_id=WP_221069220.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1191626 1192294 . - . ID=gene-VA249_RS05410;Name=VA249_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05410;old_locus_tag=VYA_10340 NZ_AP024165.1 Protein Homology CDS 1191626 1192294 . - 0 ID=cds-WP_221069221.1;Parent=gene-VA249_RS05410;Dbxref=Genbank:WP_221069221.1;Name=WP_221069221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128303.1;locus_tag=VA249_RS05410;product=DUF2982 domain-containing protein;protein_id=WP_221069221.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1192544 1192948 . + . ID=gene-VA249_RS05415;Name=VA249_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05415;old_locus_tag=VYA_10350 NZ_AP024165.1 Protein Homology CDS 1192544 1192948 . + 0 ID=cds-WP_211919541.1;Parent=gene-VA249_RS05415;Dbxref=Genbank:WP_211919541.1;Name=WP_211919541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733388.1;locus_tag=VA249_RS05415;product=MarR family transcriptional regulator;protein_id=WP_211919541.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1193403 1194494 . + . ID=gene-VA249_RS05420;Name=VA249_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05420;old_locus_tag=VYA_10360 NZ_AP024165.1 Protein Homology CDS 1193403 1194494 . + 0 ID=cds-WP_221069223.1;Parent=gene-VA249_RS05420;Dbxref=Genbank:WP_221069223.1;Name=WP_221069223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530409.1;locus_tag=VA249_RS05420;product=TRAP transporter substrate-binding protein;protein_id=WP_221069223.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1194662 1195201 . + . ID=gene-VA249_RS05425;Name=VA249_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05425;old_locus_tag=VYA_10370 NZ_AP024165.1 Protein Homology CDS 1194662 1195201 . + 0 ID=cds-WP_211919537.1;Parent=gene-VA249_RS05425;Dbxref=Genbank:WP_211919537.1;Name=WP_211919537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394733.1;locus_tag=VA249_RS05425;product=TRAP transporter small permease subunit;protein_id=WP_211919537.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1195214 1196497 . + . ID=gene-VA249_RS05430;Name=VA249_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05430;old_locus_tag=VYA_10380 NZ_AP024165.1 Protein Homology CDS 1195214 1196497 . + 0 ID=cds-WP_221069225.1;Parent=gene-VA249_RS05430;Dbxref=Genbank:WP_221069225.1;Name=WP_221069225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004725685.1;locus_tag=VA249_RS05430;product=TRAP transporter large permease subunit;protein_id=WP_221069225.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1196664 1198019 . + . ID=gene-VA249_RS05435;Name=VA249_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05435;old_locus_tag=VYA_10390 NZ_AP024165.1 Protein Homology CDS 1196664 1198019 . + 0 ID=cds-WP_221069227.1;Parent=gene-VA249_RS05435;Dbxref=Genbank:WP_221069227.1;Name=WP_221069227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429712.1;locus_tag=VA249_RS05435;product=cache domain-containing protein;protein_id=WP_221069227.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1198012 1198650 . + . ID=gene-VA249_RS05440;Name=VA249_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05440;old_locus_tag=VYA_10400 NZ_AP024165.1 Protein Homology CDS 1198012 1198650 . + 0 ID=cds-WP_221069231.1;Parent=gene-VA249_RS05440;Dbxref=Genbank:WP_221069231.1;Name=WP_221069231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706881.1;locus_tag=VA249_RS05440;product=response regulator transcription factor;protein_id=WP_221069231.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1198704 1199180 . - . ID=gene-VA249_RS05445;Name=VA249_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05445;old_locus_tag=VYA_10410 NZ_AP024165.1 Protein Homology CDS 1198704 1199180 . - 0 ID=cds-WP_128811113.1;Parent=gene-VA249_RS05445;Dbxref=Genbank:WP_128811113.1;Name=WP_128811113.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494763.1;locus_tag=VA249_RS05445;product=MarR family transcriptional regulator;protein_id=WP_128811113.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1199573 1201144 . + . ID=gene-VA249_RS05450;Name=VA249_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05450;old_locus_tag=VYA_10420 NZ_AP024165.1 Protein Homology CDS 1199573 1201144 . + 0 ID=cds-WP_211919528.1;Parent=gene-VA249_RS05450;Dbxref=Genbank:WP_211919528.1;Name=WP_211919528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335534.1;locus_tag=VA249_RS05450;product=BCCT family transporter;protein_id=WP_211919528.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1201378 1203261 . + . ID=gene-VA249_RS05455;Name=VA249_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05455;old_locus_tag=VYA_10430 NZ_AP024165.1 Protein Homology CDS 1201378 1203261 . + 0 ID=cds-WP_221069822.1;Parent=gene-VA249_RS05455;Dbxref=Genbank:WP_221069822.1;Name=WP_221069822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196513.1;locus_tag=VA249_RS05455;product=methyl-accepting chemotaxis protein;protein_id=WP_221069822.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1203376 1204095 . - . ID=gene-VA249_RS05460;Name=VA249_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05460;old_locus_tag=VYA_10440 NZ_AP024165.1 Protein Homology CDS 1203376 1204095 . - 0 ID=cds-WP_221069824.1;Parent=gene-VA249_RS05460;Dbxref=Genbank:WP_221069824.1;Name=WP_221069824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447641.1;locus_tag=VA249_RS05460;product=3'-5' exonuclease;protein_id=WP_221069824.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1204104 1205993 . - . ID=gene-VA249_RS05465;Name=VA249_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05465;old_locus_tag=VYA_10450 NZ_AP024165.1 Protein Homology CDS 1204104 1205993 . - 0 ID=cds-WP_221069241.1;Parent=gene-VA249_RS05465;Dbxref=Genbank:WP_221069241.1;Name=WP_221069241.1;Ontology_term=GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847053.1;locus_tag=VA249_RS05465;product=DUF294 nucleotidyltransferase-like domain-containing protein;protein_id=WP_221069241.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1206280 1206921 . + . ID=gene-VA249_RS05470;Name=VA249_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05470;old_locus_tag=VYA_10460 NZ_AP024165.1 Protein Homology CDS 1206280 1206921 . + 0 ID=cds-WP_221069243.1;Parent=gene-VA249_RS05470;Dbxref=Genbank:WP_221069243.1;Name=WP_221069243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649544.1;locus_tag=VA249_RS05470;product=outer membrane beta-barrel protein;protein_id=WP_221069243.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1207016 1208206 . - . ID=gene-VA249_RS05475;Name=VA249_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05475;old_locus_tag=VYA_10470 NZ_AP024165.1 Protein Homology CDS 1207016 1208206 . - 0 ID=cds-WP_221069244.1;Parent=gene-VA249_RS05475;Dbxref=Genbank:WP_221069244.1;Name=WP_221069244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386923.1;locus_tag=VA249_RS05475;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_221069244.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1208661 1208960 . - . ID=gene-VA249_RS05480;Name=VA249_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05480;old_locus_tag=VYA_10480 NZ_AP024165.1 Protein Homology CDS 1208661 1208960 . - 0 ID=cds-WP_221069247.1;Parent=gene-VA249_RS05480;Dbxref=Genbank:WP_221069247.1;Name=WP_221069247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649550.1;locus_tag=VA249_RS05480;product=hypothetical protein;protein_id=WP_221069247.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1209159 1209389 . - . ID=gene-VA249_RS05485;Name=VA249_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05485;old_locus_tag=VYA_10490 NZ_AP024165.1 Protein Homology CDS 1209159 1209389 . - 0 ID=cds-WP_164837204.1;Parent=gene-VA249_RS05485;Dbxref=Genbank:WP_164837204.1;Name=WP_164837204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483298.1;locus_tag=VA249_RS05485;product=hypothetical protein;protein_id=WP_164837204.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1209569 1210969 . - . ID=gene-VA249_RS05490;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=VA249_RS05490;old_locus_tag=VYA_10500 NZ_AP024165.1 Protein Homology CDS 1209569 1210969 . - 0 ID=cds-WP_221069256.1;Parent=gene-VA249_RS05490;Dbxref=Genbank:WP_221069256.1;Name=WP_221069256.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820454.1;locus_tag=VA249_RS05490;product=asparagine--tRNA ligase;protein_id=WP_221069256.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1211336 1211698 . + . ID=gene-VA249_RS05495;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=VA249_RS05495;old_locus_tag=VYA_10510 NZ_AP024165.1 Protein Homology CDS 1211336 1211698 . + 0 ID=cds-WP_221069259.1;Parent=gene-VA249_RS05495;Dbxref=Genbank:WP_221069259.1;Name=WP_221069259.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845980.1;locus_tag=VA249_RS05495;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_221069259.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1211852 1212319 . - . ID=gene-VA249_RS05500;Name=VA249_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05500;old_locus_tag=VYA_10520 NZ_AP024165.1 Protein Homology CDS 1211852 1212319 . - 0 ID=cds-WP_221069261.1;Parent=gene-VA249_RS05500;Dbxref=Genbank:WP_221069261.1;Name=WP_221069261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445185.1;locus_tag=VA249_RS05500;product=GNAT family N-acetyltransferase;protein_id=WP_221069261.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1212542 1213903 . - . ID=gene-VA249_RS05505;Name=VA249_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05505;old_locus_tag=VYA_10530 NZ_AP024165.1 Protein Homology CDS 1212542 1213903 . - 0 ID=cds-WP_099080867.1;Parent=gene-VA249_RS05505;Dbxref=Genbank:WP_099080867.1;Name=WP_099080867.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008986748.1;locus_tag=VA249_RS05505;product=L-serine ammonia-lyase;protein_id=WP_099080867.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1214001 1215254 . - . ID=gene-VA249_RS05510;Name=VA249_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05510;old_locus_tag=VYA_10540 NZ_AP024165.1 Protein Homology CDS 1214001 1215254 . - 0 ID=cds-WP_221069263.1;Parent=gene-VA249_RS05510;Dbxref=Genbank:WP_221069263.1;Name=WP_221069263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458812.1;locus_tag=VA249_RS05510;product=septum formation protein;protein_id=WP_221069263.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1215602 1216201 . - . ID=gene-VA249_RS05515;Name=VA249_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05515;old_locus_tag=VYA_10550 NZ_AP024165.1 Protein Homology CDS 1215602 1216201 . - 0 ID=cds-WP_221069265.1;Parent=gene-VA249_RS05515;Dbxref=Genbank:WP_221069265.1;Name=WP_221069265.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433891.1;locus_tag=VA249_RS05515;product=CoA pyrophosphatase;protein_id=WP_221069265.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1216343 1216510 . + . ID=gene-VA249_RS05520;Name=VA249_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05520 NZ_AP024165.1 GeneMarkS-2+ CDS 1216343 1216510 . + 0 ID=cds-WP_221069267.1;Parent=gene-VA249_RS05520;Dbxref=Genbank:WP_221069267.1;Name=WP_221069267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05520;product=hypothetical protein;protein_id=WP_221069267.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1216598 1217968 . - . ID=gene-VA249_RS05525;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=VA249_RS05525;old_locus_tag=VYA_10560 NZ_AP024165.1 Protein Homology CDS 1216598 1217968 . - 0 ID=cds-WP_221069826.1;Parent=gene-VA249_RS05525;Dbxref=Genbank:WP_221069826.1;Name=WP_221069826.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=para-aminobenzoic acid biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441295.1;locus_tag=VA249_RS05525;product=aminodeoxychorismate synthase component I;protein_id=WP_221069826.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1218277 1219794 . + . ID=gene-VA249_RS05530;Name=VA249_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05530;old_locus_tag=VYA_10570 NZ_AP024165.1 Protein Homology CDS 1218277 1219794 . + 0 ID=cds-WP_211919505.1;Parent=gene-VA249_RS05530;Dbxref=Genbank:WP_211919505.1;Name=WP_211919505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232348.1;locus_tag=VA249_RS05530;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_211919505.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1220055 1220240 . + . ID=gene-VA249_RS05535;Name=VA249_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05535;old_locus_tag=VYA_10580 NZ_AP024165.1 Protein Homology CDS 1220055 1220240 . + 0 ID=cds-WP_221069268.1;Parent=gene-VA249_RS05535;Dbxref=Genbank:WP_221069268.1;Name=WP_221069268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017108198.1;locus_tag=VA249_RS05535;product=hypothetical protein;protein_id=WP_221069268.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1220392 1221768 . + . ID=gene-VA249_RS05540;Name=VA249_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05540;old_locus_tag=VYA_10590 NZ_AP024165.1 Protein Homology CDS 1220392 1221768 . + 0 ID=cds-WP_221069271.1;Parent=gene-VA249_RS05540;Dbxref=Genbank:WP_221069271.1;Name=WP_221069271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636097.1;locus_tag=VA249_RS05540;product=YcjX family protein;protein_id=WP_221069271.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1221765 1222805 . + . ID=gene-VA249_RS05545;Name=VA249_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05545;old_locus_tag=VYA_10600 NZ_AP024165.1 Protein Homology CDS 1221765 1222805 . + 0 ID=cds-WP_221069273.1;Parent=gene-VA249_RS05545;Dbxref=Genbank:WP_221069273.1;Name=WP_221069273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534781.1;locus_tag=VA249_RS05545;product=YcjF family protein;protein_id=WP_221069273.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1222906 1224450 . + . ID=gene-VA249_RS05550;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=VA249_RS05550;old_locus_tag=VYA_10610 NZ_AP024165.1 Protein Homology CDS 1222906 1224450 . + 0 ID=cds-WP_221069275.1;Parent=gene-VA249_RS05550;Dbxref=Genbank:WP_221069275.1;Name=WP_221069275.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841405.1;locus_tag=VA249_RS05550;product=transcriptional regulator TyrR;protein_id=WP_221069275.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1224481 1225065 . + . ID=gene-VA249_RS05555;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=VA249_RS05555;old_locus_tag=VYA_10620 NZ_AP024165.1 Protein Homology CDS 1224481 1225065 . + 0 ID=cds-WP_221069277.1;Parent=gene-VA249_RS05555;Dbxref=Genbank:WP_221069277.1;Name=WP_221069277.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433660.1;locus_tag=VA249_RS05555;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_221069277.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1225066 1225653 . + . ID=gene-VA249_RS05560;Name=VA249_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05560;old_locus_tag=VYA_10630 NZ_AP024165.1 Protein Homology CDS 1225066 1225653 . + 0 ID=cds-WP_221069279.1;Parent=gene-VA249_RS05560;Dbxref=Genbank:WP_221069279.1;Name=WP_221069279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335515.1;locus_tag=VA249_RS05560;product=HD domain-containing protein;protein_id=WP_221069279.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1225667 1226140 . + . ID=gene-VA249_RS05565;Name=VA249_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05565;old_locus_tag=VYA_10640 NZ_AP024165.1 Protein Homology CDS 1225667 1226140 . + 0 ID=cds-WP_221069281.1;Parent=gene-VA249_RS05565;Dbxref=Genbank:WP_221069281.1;Name=WP_221069281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017054267.1;locus_tag=VA249_RS05565;product=DUF2947 domain-containing protein;protein_id=WP_221069281.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1226253 1227215 . - . ID=gene-VA249_RS05570;Name=VA249_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05570;old_locus_tag=VYA_10650 NZ_AP024165.1 Protein Homology CDS 1226253 1227215 . - 0 ID=cds-WP_221069290.1;Parent=gene-VA249_RS05570;Dbxref=Genbank:WP_221069290.1;Name=WP_221069290.1;Ontology_term=GO:0006310,GO:0009294,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA,DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000841995.1;locus_tag=VA249_RS05570;product=integron integrase;protein_id=WP_221069290.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1227865 1228296 . + . ID=gene-VA249_RS05575;Name=VA249_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05575;old_locus_tag=VYA_10660 NZ_AP024165.1 Protein Homology CDS 1227865 1228296 . + 0 ID=cds-WP_221069292.1;Parent=gene-VA249_RS05575;Dbxref=Genbank:WP_221069292.1;Name=WP_221069292.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080364.1;locus_tag=VA249_RS05575;product=NUDIX domain-containing protein;protein_id=WP_221069292.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1229269 1229358 . + . ID=gene-VA249_RS05580;Name=VA249_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05580 NZ_AP024165.1 Protein Homology CDS 1229269 1229358 . + 0 ID=cds-WP_221069828.1;Parent=gene-VA249_RS05580;Dbxref=Genbank:WP_221069828.1;Name=WP_221069828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05580;product=DUF3265 domain-containing protein;protein_id=WP_221069828.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1229462 1229728 . + . ID=gene-VA249_RS05585;Name=VA249_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05585;old_locus_tag=VYA_10680 NZ_AP024165.1 Protein Homology CDS 1229462 1229728 . + 0 ID=cds-WP_013571723.1;Parent=gene-VA249_RS05585;Dbxref=Genbank:WP_013571723.1;Name=WP_013571723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000937852.1;locus_tag=VA249_RS05585;product=hypothetical protein;protein_id=WP_013571723.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1229765 1229854 . + . ID=gene-VA249_RS05590;Name=VA249_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05590 NZ_AP024165.1 Protein Homology CDS 1229765 1229854 . + 0 ID=cds-WP_196334514.1;Parent=gene-VA249_RS05590;Dbxref=Genbank:WP_196334514.1;Name=WP_196334514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05590;product=DUF3265 domain-containing protein;protein_id=WP_196334514.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1229892 1230722 . + . ID=gene-VA249_RS05595;Name=VA249_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05595;old_locus_tag=VYA_10690 NZ_AP024165.1 Protein Homology CDS 1229892 1230722 . + 0 ID=cds-WP_221069294.1;Parent=gene-VA249_RS05595;Dbxref=Genbank:WP_221069294.1;Name=WP_221069294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004743440.1;locus_tag=VA249_RS05595;product=hypothetical protein;protein_id=WP_221069294.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1231683 1231763 . + . ID=gene-VA249_RS24030;Name=VA249_RS24030;end_range=1231763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24030;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1231683 1231763 . + 0 ID=cds-VA249_RS24030;Parent=gene-VA249_RS24030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1231763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050759.1;locus_tag=VA249_RS24030;partial=true;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1232218 1232328 . + . ID=gene-VA249_RS05605;Name=VA249_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05605 NZ_AP024165.1 Protein Homology CDS 1232218 1232328 . + 0 ID=cds-WP_225927115.1;Parent=gene-VA249_RS05605;Dbxref=Genbank:WP_225927115.1;Name=WP_225927115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005500217.1;locus_tag=VA249_RS05605;product=DUF3265 domain-containing protein;protein_id=WP_225927115.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1232355 1232747 . + . ID=gene-VA249_RS05610;Name=VA249_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05610;old_locus_tag=VYA_10710 NZ_AP024165.1 Protein Homology CDS 1232355 1232747 . + 0 ID=cds-WP_108654715.1;Parent=gene-VA249_RS05610;Dbxref=Genbank:WP_108654715.1;Name=WP_108654715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420630.1;locus_tag=VA249_RS05610;product=hypothetical protein;protein_id=WP_108654715.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1232762 1232854 . + . ID=gene-VA249_RS05615;Name=VA249_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05615 NZ_AP024165.1 Protein Homology CDS 1232762 1232854 . + 0 ID=cds-WP_221069295.1;Parent=gene-VA249_RS05615;Dbxref=Genbank:WP_221069295.1;Name=WP_221069295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05615;product=DUF3265 domain-containing protein;protein_id=WP_221069295.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1233273 1233402 . + . ID=gene-VA249_RS24035;Name=VA249_RS24035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24035;pseudo=true NZ_AP024165.1 Protein Homology CDS 1233273 1233402 . + 0 ID=cds-VA249_RS24035;Parent=gene-VA249_RS24035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464445.1;locus_tag=VA249_RS24035;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1233499 1234002 . + . ID=gene-VA249_RS05620;Name=VA249_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05620;old_locus_tag=VYA_10720 NZ_AP024165.1 Protein Homology CDS 1233499 1234002 . + 0 ID=cds-WP_221069297.1;Parent=gene-VA249_RS05620;Dbxref=Genbank:WP_221069297.1;Name=WP_221069297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734954.1;locus_tag=VA249_RS05620;product=hypothetical protein;protein_id=WP_221069297.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1234527 1235300 . + . ID=gene-VA249_RS05625;Name=VA249_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05625;old_locus_tag=VYA_10730 NZ_AP024165.1 Protein Homology CDS 1234527 1235300 . + 0 ID=cds-WP_221069300.1;Parent=gene-VA249_RS05625;Dbxref=Genbank:WP_221069300.1;Name=WP_221069300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448813.1;locus_tag=VA249_RS05625;product=NERD domain-containing protein;protein_id=WP_221069300.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1235315 1235407 . + . ID=gene-VA249_RS05630;Name=VA249_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05630 NZ_AP024165.1 Protein Homology CDS 1235315 1235407 . + 0 ID=cds-WP_086375044.1;Parent=gene-VA249_RS05630;Dbxref=Genbank:WP_086375044.1;Name=WP_086375044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05630;product=DUF3265 domain-containing protein;protein_id=WP_086375044.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1235938 1236027 . + . ID=gene-VA249_RS05635;Name=VA249_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05635 NZ_AP024165.1 Protein Homology CDS 1235938 1236027 . + 0 ID=cds-WP_073514058.1;Parent=gene-VA249_RS05635;Dbxref=Genbank:WP_073514058.1;Name=WP_073514058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05635;product=DUF3265 domain-containing protein;protein_id=WP_073514058.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1236056 1236388 . + . ID=gene-VA249_RS05640;Name=VA249_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05640;old_locus_tag=VYA_10740 NZ_AP024165.1 Protein Homology CDS 1236056 1236388 . + 0 ID=cds-WP_221069302.1;Parent=gene-VA249_RS05640;Dbxref=Genbank:WP_221069302.1;Name=WP_221069302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016227.2;locus_tag=VA249_RS05640;product=50S ribosome-binding protein YggL;protein_id=WP_221069302.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1236403 1236495 . + . ID=gene-VA249_RS05645;Name=VA249_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05645 NZ_AP024165.1 Protein Homology CDS 1236403 1236495 . + 0 ID=cds-WP_221069304.1;Parent=gene-VA249_RS05645;Dbxref=Genbank:WP_221069304.1;Name=WP_221069304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494856.1;locus_tag=VA249_RS05645;product=DUF3265 domain-containing protein;protein_id=WP_221069304.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1236674 1237003 . + . ID=gene-VA249_RS05650;Name=VA249_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05650 NZ_AP024165.1 Protein Homology CDS 1236674 1237003 . + 0 ID=cds-WP_225927116.1;Parent=gene-VA249_RS05650;Dbxref=Genbank:WP_225927116.1;Name=WP_225927116.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.2;locus_tag=VA249_RS05650;product=NUDIX domain-containing protein;protein_id=WP_225927116.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1236994 1237056 . + . ID=gene-VA249_RS24040;Name=VA249_RS24040;end_range=1237056,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24040;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1236994 1237056 . + 0 ID=cds-VA249_RS24040;Parent=gene-VA249_RS24040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1237056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483184.1;locus_tag=VA249_RS24040;partial=true;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1237712 1238104 . + . ID=gene-VA249_RS05655;Name=VA249_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05655;old_locus_tag=VYA_10760 NZ_AP024165.1 Protein Homology CDS 1237712 1238104 . + 0 ID=cds-WP_108654715.1-2;Parent=gene-VA249_RS05655;Dbxref=Genbank:WP_108654715.1;Name=WP_108654715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420630.1;locus_tag=VA249_RS05655;product=hypothetical protein;protein_id=WP_108654715.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1238119 1238211 . + . ID=gene-VA249_RS05660;Name=VA249_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05660 NZ_AP024165.1 Protein Homology CDS 1238119 1238211 . + 0 ID=cds-WP_221069295.1-2;Parent=gene-VA249_RS05660;Dbxref=Genbank:WP_221069295.1;Name=WP_221069295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05660;product=DUF3265 domain-containing protein;protein_id=WP_221069295.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1238240 1238914 . + . ID=gene-VA249_RS05665;Name=VA249_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05665;old_locus_tag=VYA_10770 NZ_AP024165.1 Protein Homology CDS 1238240 1238914 . + 0 ID=cds-WP_031850734.1;Parent=gene-VA249_RS05665;Dbxref=Genbank:WP_031850734.1;Name=WP_031850734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016792352.1;locus_tag=VA249_RS05665;product=Cthe_2314 family HEPN domain-containing protein;protein_id=WP_031850734.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1239065 1239835 . + . ID=gene-VA249_RS05670;Name=VA249_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05670;old_locus_tag=VYA_10780 NZ_AP024165.1 GeneMarkS-2+ CDS 1239065 1239835 . + 0 ID=cds-WP_221069306.1;Parent=gene-VA249_RS05670;Dbxref=Genbank:WP_221069306.1;Name=WP_221069306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05670;product=hypothetical protein;protein_id=WP_221069306.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1239863 1239955 . + . ID=gene-VA249_RS05675;Name=VA249_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05675 NZ_AP024165.1 Protein Homology CDS 1239863 1239955 . + 0 ID=cds-WP_005448238.1;Parent=gene-VA249_RS05675;Dbxref=Genbank:WP_005448238.1;Name=WP_005448238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05675;product=DUF3265 domain-containing protein;protein_id=WP_005448238.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1240004 1240330 . + . ID=gene-VA249_RS05680;Name=VA249_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05680;old_locus_tag=VYA_10790 NZ_AP024165.1 Protein Homology CDS 1240004 1240330 . + 0 ID=cds-WP_025633776.1;Parent=gene-VA249_RS05680;Dbxref=Genbank:WP_025633776.1;Name=WP_025633776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017110815.1;locus_tag=VA249_RS05680;product=hypothetical protein;protein_id=WP_025633776.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1240538 1240840 . - . ID=gene-VA249_RS05685;Name=VA249_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05685 NZ_AP024165.1 Protein Homology CDS 1240538 1240840 . - 0 ID=cds-WP_221069308.1;Parent=gene-VA249_RS05685;Dbxref=Genbank:WP_221069308.1;Name=WP_221069308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821409.1;locus_tag=VA249_RS05685;product=hypothetical protein;protein_id=WP_221069308.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1240969 1241058 . + . ID=gene-VA249_RS05690;Name=VA249_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05690 NZ_AP024165.1 Protein Homology CDS 1240969 1241058 . + 0 ID=cds-WP_072829120.1;Parent=gene-VA249_RS05690;Dbxref=Genbank:WP_072829120.1;Name=WP_072829120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05690;product=DUF3265 domain-containing protein;protein_id=WP_072829120.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1241684 1241998 . + . ID=gene-VA249_RS05695;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=VA249_RS05695;old_locus_tag=VYA_10800 NZ_AP024165.1 Protein Homology CDS 1241684 1241998 . + 0 ID=cds-WP_004401149.1;Parent=gene-VA249_RS05695;Dbxref=Genbank:WP_004401149.1;Name=WP_004401149.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452033.1;locus_tag=VA249_RS05695;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_004401149.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1242036 1242146 . + . ID=gene-VA249_RS05700;Name=VA249_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05700 NZ_AP024165.1 Protein Homology CDS 1242036 1242146 . + 0 ID=cds-WP_079878462.1;Parent=gene-VA249_RS05700;Dbxref=Genbank:WP_079878462.1;Name=WP_079878462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420742.1;locus_tag=VA249_RS05700;product=DUF3265 domain-containing protein;protein_id=WP_079878462.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1242183 1243247 . + . ID=gene-VA249_RS05705;Name=VA249_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05705;old_locus_tag=VYA_10810 NZ_AP024165.1 Protein Homology CDS 1242183 1243247 . + 0 ID=cds-WP_221069310.1;Parent=gene-VA249_RS05705;Dbxref=Genbank:WP_221069310.1;Name=WP_221069310.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025448.2;locus_tag=VA249_RS05705;product=DUF4263 domain-containing protein;protein_id=WP_221069310.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1243270 1243362 . + . ID=gene-VA249_RS05710;Name=VA249_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05710 NZ_AP024165.1 Protein Homology CDS 1243270 1243362 . + 0 ID=cds-WP_221069312.1;Parent=gene-VA249_RS05710;Dbxref=Genbank:WP_221069312.1;Name=WP_221069312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004418565.1;locus_tag=VA249_RS05710;product=DUF3265 domain-containing protein;protein_id=WP_221069312.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1243821 1244135 . + . ID=gene-VA249_RS05715;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=VA249_RS05715;old_locus_tag=VYA_10820 NZ_AP024165.1 Protein Homology CDS 1243821 1244135 . + 0 ID=cds-WP_221069314.1;Parent=gene-VA249_RS05715;Dbxref=Genbank:WP_221069314.1;Name=WP_221069314.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004401149.1;locus_tag=VA249_RS05715;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_221069314.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1244194 1244283 . + . ID=gene-VA249_RS05720;Name=VA249_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05720 NZ_AP024165.1 Protein Homology CDS 1244194 1244283 . + 0 ID=cds-WP_079877496.1;Parent=gene-VA249_RS05720;Dbxref=Genbank:WP_079877496.1;Name=WP_079877496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004418565.1;locus_tag=VA249_RS05720;product=DUF3265 domain-containing protein;protein_id=WP_079877496.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1244806 1244895 . + . ID=gene-VA249_RS05725;Name=VA249_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05725 NZ_AP024165.1 Protein Homology CDS 1244806 1244895 . + 0 ID=cds-WP_109170425.1;Parent=gene-VA249_RS05725;Dbxref=Genbank:WP_109170425.1;Name=WP_109170425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05725;product=DUF3265 domain-containing protein;protein_id=WP_109170425.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1245415 1245504 . + . ID=gene-VA249_RS05730;Name=VA249_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05730 NZ_AP024165.1 Protein Homology CDS 1245415 1245504 . + 0 ID=cds-WP_072829120.1-2;Parent=gene-VA249_RS05730;Dbxref=Genbank:WP_072829120.1;Name=WP_072829120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05730;product=DUF3265 domain-containing protein;protein_id=WP_072829120.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1245537 1246484 . + . ID=gene-VA249_RS05735;Name=VA249_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05735;old_locus_tag=VYA_10830 NZ_AP024165.1 Protein Homology CDS 1245537 1246484 . + 0 ID=cds-WP_221069316.1;Parent=gene-VA249_RS05735;Dbxref=Genbank:WP_221069316.1;Name=WP_221069316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016362.2;locus_tag=VA249_RS05735;product=restriction endonuclease;protein_id=WP_221069316.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1247123 1247212 . + . ID=gene-VA249_RS05740;Name=VA249_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05740 NZ_AP024165.1 Protein Homology CDS 1247123 1247212 . + 0 ID=cds-WP_072833196.1;Parent=gene-VA249_RS05740;Dbxref=Genbank:WP_072833196.1;Name=WP_072833196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05740;product=DUF3265 domain-containing protein;protein_id=WP_072833196.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1247631 1247759 . + . ID=gene-VA249_RS05745;Name=VA249_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05745 NZ_AP024165.1 Protein Homology CDS 1247631 1247759 . + 0 ID=cds-WP_099098883.1;Parent=gene-VA249_RS05745;Dbxref=Genbank:WP_099098883.1;Name=WP_099098883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050347.1;locus_tag=VA249_RS05745;product=DUF3265 domain-containing protein;protein_id=WP_099098883.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1247790 1248311 . + . ID=gene-VA249_RS05750;Name=VA249_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05750;old_locus_tag=VYA_10840 NZ_AP024165.1 Protein Homology CDS 1247790 1248311 . + 0 ID=cds-WP_005433929.1;Parent=gene-VA249_RS05750;Dbxref=Genbank:WP_005433929.1;Name=WP_005433929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494827.1;locus_tag=VA249_RS05750;product=GNAT family N-acetyltransferase;protein_id=WP_005433929.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1248345 1248434 . + . ID=gene-VA249_RS05755;Name=VA249_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05755 NZ_AP024165.1 Protein Homology CDS 1248345 1248434 . + 0 ID=cds-WP_072039143.1;Parent=gene-VA249_RS05755;Dbxref=Genbank:WP_072039143.1;Name=WP_072039143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004749163.1;locus_tag=VA249_RS05755;product=DUF3265 domain-containing protein;protein_id=WP_072039143.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1248453 1249265 . + . ID=gene-VA249_RS05760;Name=VA249_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05760;old_locus_tag=VYA_10850 NZ_AP024165.1 Protein Homology CDS 1248453 1249265 . + 0 ID=cds-WP_221069317.1;Parent=gene-VA249_RS05760;Dbxref=Genbank:WP_221069317.1;Name=WP_221069317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150466.1;locus_tag=VA249_RS05760;product=hypothetical protein;protein_id=WP_221069317.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1249262 1249372 . + . ID=gene-VA249_RS05765;Name=VA249_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05765 NZ_AP024165.1 Protein Homology CDS 1249262 1249372 . + 0 ID=cds-WP_082037628.1;Parent=gene-VA249_RS05765;Dbxref=Genbank:WP_082037628.1;Name=WP_082037628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420742.1;locus_tag=VA249_RS05765;product=DUF3265 domain-containing protein;protein_id=WP_082037628.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1249494 1249775 . - . ID=gene-VA249_RS05770;Name=VA249_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05770 NZ_AP024165.1 GeneMarkS-2+ CDS 1249494 1249775 . - 0 ID=cds-WP_221069319.1;Parent=gene-VA249_RS05770;Dbxref=Genbank:WP_221069319.1;Name=WP_221069319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05770;product=hypothetical protein;protein_id=WP_221069319.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1249904 1249992 . + . ID=gene-VA249_RS05775;Name=VA249_RS05775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS05775;pseudo=true NZ_AP024165.1 Protein Homology CDS 1249904 1249992 . + 0 ID=cds-VA249_RS05775;Parent=gene-VA249_RS05775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05775;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1250019 1250867 . + . ID=gene-VA249_RS05780;Name=VA249_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05780;old_locus_tag=VYA_10860 NZ_AP024165.1 GeneMarkS-2+ CDS 1250019 1250867 . + 0 ID=cds-WP_086047002.1;Parent=gene-VA249_RS05780;Dbxref=Genbank:WP_086047002.1;Name=WP_086047002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05780;product=hypothetical protein;protein_id=WP_086047002.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1250882 1250974 . + . ID=gene-VA249_RS05785;Name=VA249_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05785 NZ_AP024165.1 Protein Homology CDS 1250882 1250974 . + 0 ID=cds-WP_072605894.1;Parent=gene-VA249_RS05785;Dbxref=Genbank:WP_072605894.1;Name=WP_072605894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05785;product=DUF3265 domain-containing protein;protein_id=WP_072605894.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1251015 1251542 . + . ID=gene-VA249_RS05790;Name=VA249_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05790;old_locus_tag=VYA_10870 NZ_AP024165.1 Protein Homology CDS 1251015 1251542 . + 0 ID=cds-WP_221069321.1;Parent=gene-VA249_RS05790;Dbxref=Genbank:WP_221069321.1;Name=WP_221069321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017045671.1;locus_tag=VA249_RS05790;product=AAA family ATPase;protein_id=WP_221069321.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1252192 1252284 . + . ID=gene-VA249_RS05795;Name=VA249_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05795 NZ_AP024165.1 Protein Homology CDS 1252192 1252284 . + 0 ID=cds-WP_005377014.1;Parent=gene-VA249_RS05795;Dbxref=Genbank:WP_005377014.1;Name=WP_005377014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05795;product=DUF3265 domain-containing protein;protein_id=WP_005377014.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1252313 1252948 . + . ID=gene-VA249_RS05800;Name=VA249_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05800;old_locus_tag=VYA_10880 NZ_AP024165.1 Protein Homology CDS 1252313 1252948 . + 0 ID=cds-WP_221069323.1;Parent=gene-VA249_RS05800;Dbxref=Genbank:WP_221069323.1;Name=WP_221069323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296934.1;locus_tag=VA249_RS05800;product=AbiV family abortive infection protein;protein_id=WP_221069323.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1252969 1253061 . + . ID=gene-VA249_RS05805;Name=VA249_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05805 NZ_AP024165.1 Protein Homology CDS 1252969 1253061 . + 0 ID=cds-WP_072828804.1;Parent=gene-VA249_RS05805;Dbxref=Genbank:WP_072828804.1;Name=WP_072828804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05805;product=DUF3265 domain-containing protein;protein_id=WP_072828804.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1253503 1253778 . + . ID=gene-VA249_RS05810;Name=VA249_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05810;old_locus_tag=VYA_10890 NZ_AP024165.1 GeneMarkS-2+ CDS 1253503 1253778 . + 0 ID=cds-WP_038887404.1;Parent=gene-VA249_RS05810;Dbxref=Genbank:WP_038887404.1;Name=WP_038887404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05810;product=hypothetical protein;protein_id=WP_038887404.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1253796 1253885 . + . ID=gene-VA249_RS05815;Name=VA249_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05815 NZ_AP024165.1 Protein Homology CDS 1253796 1253885 . + 0 ID=cds-WP_071881309.1;Parent=gene-VA249_RS05815;Dbxref=Genbank:WP_071881309.1;Name=WP_071881309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05815;product=DUF3265 domain-containing protein;protein_id=WP_071881309.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1253959 1254300 . + . ID=gene-VA249_RS05820;Name=VA249_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05820;old_locus_tag=VYA_10900 NZ_AP024165.1 GeneMarkS-2+ CDS 1253959 1254300 . + 0 ID=cds-WP_017191243.1;Parent=gene-VA249_RS05820;Dbxref=Genbank:WP_017191243.1;Name=WP_017191243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05820;product=hypothetical protein;protein_id=WP_017191243.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1254457 1254888 . + . ID=gene-VA249_RS05830;Name=VA249_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05830;old_locus_tag=VYA_10910 NZ_AP024165.1 Protein Homology CDS 1254457 1254888 . + 0 ID=cds-WP_221069292.1-2;Parent=gene-VA249_RS05830;Dbxref=Genbank:WP_221069292.1;Name=WP_221069292.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080364.1;locus_tag=VA249_RS05830;product=NUDIX domain-containing protein;protein_id=WP_221069292.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1255045 1255467 . + . ID=gene-VA249_RS05835;Name=VA249_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05835;old_locus_tag=VYA_10920 NZ_AP024165.1 GeneMarkS-2+ CDS 1255045 1255467 . + 0 ID=cds-WP_171052044.1;Parent=gene-VA249_RS05835;Dbxref=Genbank:WP_171052044.1;Name=WP_171052044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05835;product=hypothetical protein;protein_id=WP_171052044.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1255496 1255588 . + . ID=gene-VA249_RS05840;Name=VA249_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05840 NZ_AP024165.1 Protein Homology CDS 1255496 1255588 . + 0 ID=cds-WP_206361399.1;Parent=gene-VA249_RS05840;Dbxref=Genbank:WP_206361399.1;Name=WP_206361399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05840;product=DUF3265 domain-containing protein;protein_id=WP_206361399.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1255767 1256096 . + . ID=gene-VA249_RS05845;Name=VA249_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05845 NZ_AP024165.1 Protein Homology CDS 1255767 1256096 . + 0 ID=cds-WP_225927116.1-2;Parent=gene-VA249_RS05845;Dbxref=Genbank:WP_225927116.1;Name=WP_225927116.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.2;locus_tag=VA249_RS05845;product=NUDIX domain-containing protein;protein_id=WP_225927116.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1256087 1256149 . + . ID=gene-VA249_RS24045;Name=VA249_RS24045;end_range=1256149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24045;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1256087 1256149 . + 0 ID=cds-VA249_RS24045;Parent=gene-VA249_RS24045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1256149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483184.1;locus_tag=VA249_RS24045;partial=true;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1256231 1256818 . + . ID=gene-VA249_RS05850;Name=VA249_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05850;old_locus_tag=VYA_10930 NZ_AP024165.1 GeneMarkS-2+ CDS 1256231 1256818 . + 0 ID=cds-WP_050917578.1;Parent=gene-VA249_RS05850;Dbxref=Genbank:WP_050917578.1;Name=WP_050917578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05850;product=hypothetical protein;protein_id=WP_050917578.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1256844 1256936 . + . ID=gene-VA249_RS05855;Name=VA249_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05855 NZ_AP024165.1 Protein Homology CDS 1256844 1256936 . + 0 ID=cds-WP_078555087.1;Parent=gene-VA249_RS05855;Dbxref=Genbank:WP_078555087.1;Name=WP_078555087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05855;product=DUF3265 domain-containing protein;protein_id=WP_078555087.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1256977 1257729 . + . ID=gene-VA249_RS05860;Name=VA249_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05860;old_locus_tag=VYA_10940 NZ_AP024165.1 Protein Homology CDS 1256977 1257729 . + 0 ID=cds-WP_221069325.1;Parent=gene-VA249_RS05860;Dbxref=Genbank:WP_221069325.1;Name=WP_221069325.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=VA249_RS05860;product=methyltransferase domain-containing protein;protein_id=WP_221069325.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1258351 1258653 . - . ID=gene-VA249_RS05865;Name=VA249_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05865 NZ_AP024165.1 Protein Homology CDS 1258351 1258653 . - 0 ID=cds-WP_221069327.1;Parent=gene-VA249_RS05865;Dbxref=Genbank:WP_221069327.1;Name=WP_221069327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821409.1;locus_tag=VA249_RS05865;product=hypothetical protein;protein_id=WP_221069327.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1258782 1258871 . + . ID=gene-VA249_RS05870;Name=VA249_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05870 NZ_AP024165.1 Protein Homology CDS 1258782 1258871 . + 0 ID=cds-WP_072829120.1-3;Parent=gene-VA249_RS05870;Dbxref=Genbank:WP_072829120.1;Name=WP_072829120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05870;product=DUF3265 domain-containing protein;protein_id=WP_072829120.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1259290 1259419 . + . ID=gene-VA249_RS24050;Name=VA249_RS24050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24050;pseudo=true NZ_AP024165.1 Protein Homology CDS 1259290 1259419 . + 0 ID=cds-VA249_RS24050;Parent=gene-VA249_RS24050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464445.1;locus_tag=VA249_RS24050;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1259450 1259971 . + . ID=gene-VA249_RS05875;Name=VA249_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05875;old_locus_tag=VYA_10950 NZ_AP024165.1 Protein Homology CDS 1259450 1259971 . + 0 ID=cds-WP_221069329.1;Parent=gene-VA249_RS05875;Dbxref=Genbank:WP_221069329.1;Name=WP_221069329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494827.1;locus_tag=VA249_RS05875;product=GNAT family N-acetyltransferase;protein_id=WP_221069329.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1260092 1260514 . + . ID=gene-VA249_RS05880;Name=VA249_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05880;old_locus_tag=VYA_10960 NZ_AP024165.1 Protein Homology CDS 1260092 1260514 . + 0 ID=cds-WP_221069331.1;Parent=gene-VA249_RS05880;Dbxref=Genbank:WP_221069331.1;Name=WP_221069331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188771.1;locus_tag=VA249_RS05880;product=GNAT family N-acetyltransferase;protein_id=WP_221069331.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1261087 1261344 . + . ID=gene-VA249_RS05885;Name=VA249_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05885;old_locus_tag=VYA_10970 NZ_AP024165.1 Protein Homology CDS 1261087 1261344 . + 0 ID=cds-WP_005448240.1;Parent=gene-VA249_RS05885;Dbxref=Genbank:WP_005448240.1;Name=WP_005448240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005398415.1;locus_tag=VA249_RS05885;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_005448240.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1261332 1261634 . + . ID=gene-VA249_RS05890;Name=VA249_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05890;old_locus_tag=VYA_10980 NZ_AP024165.1 Protein Homology CDS 1261332 1261634 . + 0 ID=cds-WP_221069333.1;Parent=gene-VA249_RS05890;Dbxref=Genbank:WP_221069333.1;Name=WP_221069333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196829.1;locus_tag=VA249_RS05890;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_221069333.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1261670 1261762 . + . ID=gene-VA249_RS05895;Name=VA249_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05895 NZ_AP024165.1 Protein Homology CDS 1261670 1261762 . + 0 ID=cds-WP_079758040.1;Parent=gene-VA249_RS05895;Dbxref=Genbank:WP_079758040.1;Name=WP_079758040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05895;product=DUF3265 domain-containing protein;protein_id=WP_079758040.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1261859 1262362 . + . ID=gene-VA249_RS05900;Name=VA249_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05900;old_locus_tag=VYA_10990 NZ_AP024165.1 Protein Homology CDS 1261859 1262362 . + 0 ID=cds-WP_221069297.1-2;Parent=gene-VA249_RS05900;Dbxref=Genbank:WP_221069297.1;Name=WP_221069297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734954.1;locus_tag=VA249_RS05900;product=hypothetical protein;protein_id=WP_221069297.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1262474 1263289 . + . ID=gene-VA249_RS05905;Name=VA249_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05905;old_locus_tag=VYA_11000 NZ_AP024165.1 Protein Homology CDS 1262474 1263289 . + 0 ID=cds-WP_221069335.1;Parent=gene-VA249_RS05905;Dbxref=Genbank:WP_221069335.1;Name=WP_221069335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080275.1;locus_tag=VA249_RS05905;product=Abi-alpha family protein;protein_id=WP_221069335.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1263905 1263994 . + . ID=gene-VA249_RS05910;Name=VA249_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05910 NZ_AP024165.1 Protein Homology CDS 1263905 1263994 . + 0 ID=cds-WP_077345960.1;Parent=gene-VA249_RS05910;Dbxref=Genbank:WP_077345960.1;Name=WP_077345960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05910;product=DUF3265 domain-containing protein;protein_id=WP_077345960.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1264023 1264355 . + . ID=gene-VA249_RS05915;Name=VA249_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05915;old_locus_tag=VYA_11010 NZ_AP024165.1 Protein Homology CDS 1264023 1264355 . + 0 ID=cds-WP_221069302.1-2;Parent=gene-VA249_RS05915;Dbxref=Genbank:WP_221069302.1;Name=WP_221069302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016227.2;locus_tag=VA249_RS05915;product=50S ribosome-binding protein YggL;protein_id=WP_221069302.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1264370 1264462 . + . ID=gene-VA249_RS05920;Name=VA249_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05920 NZ_AP024165.1 Protein Homology CDS 1264370 1264462 . + 0 ID=cds-WP_221069304.1-2;Parent=gene-VA249_RS05920;Dbxref=Genbank:WP_221069304.1;Name=WP_221069304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494856.1;locus_tag=VA249_RS05920;product=DUF3265 domain-containing protein;protein_id=WP_221069304.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1264482 1265141 . - . ID=gene-VA249_RS05925;Name=VA249_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05925;old_locus_tag=VYA_11020 NZ_AP024165.1 Protein Homology CDS 1264482 1265141 . - 0 ID=cds-WP_221069337.1;Parent=gene-VA249_RS05925;Dbxref=Genbank:WP_221069337.1;Name=WP_221069337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.2;locus_tag=VA249_RS05925;product=DUF3800 domain-containing protein;protein_id=WP_221069337.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1265310 1265402 . + . ID=gene-VA249_RS05930;Name=VA249_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05930 NZ_AP024165.1 Protein Homology CDS 1265310 1265402 . + 0 ID=cds-WP_079758036.1;Parent=gene-VA249_RS05930;Dbxref=Genbank:WP_079758036.1;Name=WP_079758036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05930;product=DUF3265 domain-containing protein;protein_id=WP_079758036.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1265997 1266515 . + . ID=gene-VA249_RS05935;Name=VA249_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05935;old_locus_tag=VYA_11030 NZ_AP024165.1 GeneMarkS-2+ CDS 1265997 1266515 . + 0 ID=cds-WP_221069339.1;Parent=gene-VA249_RS05935;Dbxref=Genbank:WP_221069339.1;Name=WP_221069339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05935;product=hypothetical protein;protein_id=WP_221069339.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1266645 1267520 . + . ID=gene-VA249_RS05940;Name=VA249_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05940;old_locus_tag=VYA_11040 NZ_AP024165.1 GeneMarkS-2+ CDS 1266645 1267520 . + 0 ID=cds-WP_017097816.1;Parent=gene-VA249_RS05940;Dbxref=Genbank:WP_017097816.1;Name=WP_017097816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS05940;product=hypothetical protein;protein_id=WP_017097816.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1267545 1267637 . + . ID=gene-VA249_RS05945;Name=VA249_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05945 NZ_AP024165.1 Protein Homology CDS 1267545 1267637 . + 0 ID=cds-WP_130248606.1;Parent=gene-VA249_RS05945;Dbxref=Genbank:WP_130248606.1;Name=WP_130248606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05945;product=DUF3265 domain-containing protein;protein_id=WP_130248606.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1267667 1268080 . + . ID=gene-VA249_RS05950;Name=VA249_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05950;old_locus_tag=VYA_11050 NZ_AP024165.1 Protein Homology CDS 1267667 1268080 . + 0 ID=cds-WP_221069830.1;Parent=gene-VA249_RS05950;Dbxref=Genbank:WP_221069830.1;Name=WP_221069830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004418438.1;locus_tag=VA249_RS05950;product=lysozyme inhibitor LprI family protein;protein_id=WP_221069830.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1268237 1268863 . + . ID=gene-VA249_RS05955;Name=VA249_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05955;old_locus_tag=VYA_11060 NZ_AP024165.1 Protein Homology CDS 1268237 1268863 . + 0 ID=cds-WP_225927104.1;Parent=gene-VA249_RS05955;Dbxref=Genbank:WP_225927104.1;Name=WP_225927104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017041503.1;locus_tag=VA249_RS05955;product=hypothetical protein;protein_id=WP_225927104.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1269017 1269394 . + . ID=gene-VA249_RS05960;Name=VA249_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05960;old_locus_tag=VYA_11070 NZ_AP024165.1 Protein Homology CDS 1269017 1269394 . + 0 ID=cds-WP_017191301.1;Parent=gene-VA249_RS05960;Dbxref=Genbank:WP_017191301.1;Name=WP_017191301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000411105.1;locus_tag=VA249_RS05960;product=hypothetical protein;protein_id=WP_017191301.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1269391 1269501 . + . ID=gene-VA249_RS05965;Name=VA249_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05965 NZ_AP024165.1 Protein Homology CDS 1269391 1269501 . + 0 ID=cds-WP_221069832.1;Parent=gene-VA249_RS05965;Dbxref=Genbank:WP_221069832.1;Name=WP_221069832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050230.1;locus_tag=VA249_RS05965;product=DUF3265 domain-containing protein;protein_id=WP_221069832.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1269528 1269920 . + . ID=gene-VA249_RS05970;Name=VA249_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05970;old_locus_tag=VYA_11080 NZ_AP024165.1 Protein Homology CDS 1269528 1269920 . + 0 ID=cds-WP_108654715.1-3;Parent=gene-VA249_RS05970;Dbxref=Genbank:WP_108654715.1;Name=WP_108654715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420630.1;locus_tag=VA249_RS05970;product=hypothetical protein;protein_id=WP_108654715.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1269935 1270027 . + . ID=gene-VA249_RS05975;Name=VA249_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05975 NZ_AP024165.1 Protein Homology CDS 1269935 1270027 . + 0 ID=cds-WP_221069295.1-3;Parent=gene-VA249_RS05975;Dbxref=Genbank:WP_221069295.1;Name=WP_221069295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05975;product=DUF3265 domain-containing protein;protein_id=WP_221069295.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1270068 1270820 . + . ID=gene-VA249_RS05980;Name=VA249_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05980;old_locus_tag=VYA_11090 NZ_AP024165.1 Protein Homology CDS 1270068 1270820 . + 0 ID=cds-WP_221069343.1;Parent=gene-VA249_RS05980;Dbxref=Genbank:WP_221069343.1;Name=WP_221069343.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=VA249_RS05980;product=methyltransferase domain-containing protein;protein_id=WP_221069343.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1270963 1271439 . + . ID=gene-VA249_RS05985;Name=VA249_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05985;old_locus_tag=VYA_11100 NZ_AP024165.1 Protein Homology CDS 1270963 1271439 . + 0 ID=cds-WP_005500215.1;Parent=gene-VA249_RS05985;Dbxref=Genbank:WP_005500215.1;Name=WP_005500215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005500215.1;locus_tag=VA249_RS05985;product=GNAT family N-acetyltransferase;protein_id=WP_005500215.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1271457 1271546 . + . ID=gene-VA249_RS05990;Name=VA249_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05990 NZ_AP024165.1 Protein Homology CDS 1271457 1271546 . + 0 ID=cds-WP_080253819.1;Parent=gene-VA249_RS05990;Dbxref=Genbank:WP_080253819.1;Name=WP_080253819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS05990;product=DUF3265 domain-containing protein;protein_id=WP_080253819.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1271650 1271916 . + . ID=gene-VA249_RS05995;Name=VA249_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS05995;old_locus_tag=VYA_11110 NZ_AP024165.1 Protein Homology CDS 1271650 1271916 . + 0 ID=cds-WP_221069345.1;Parent=gene-VA249_RS05995;Dbxref=Genbank:WP_221069345.1;Name=WP_221069345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000937852.1;locus_tag=VA249_RS05995;product=hypothetical protein;protein_id=WP_221069345.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1271920 1271988 . + . ID=gene-VA249_RS24055;Name=VA249_RS24055;end_range=1271988,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24055;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1271920 1271988 . + 0 ID=cds-VA249_RS24055;Parent=gene-VA249_RS24055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1271988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005500217.1;locus_tag=VA249_RS24055;partial=true;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1272089 1272652 . + . ID=gene-VA249_RS06000;Name=VA249_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06000;old_locus_tag=VYA_11120 NZ_AP024165.1 Protein Homology CDS 1272089 1272652 . + 0 ID=cds-WP_221069347.1;Parent=gene-VA249_RS06000;Dbxref=Genbank:WP_221069347.1;Name=WP_221069347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008988986.1;locus_tag=VA249_RS06000;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_221069347.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1272701 1272793 . + . ID=gene-VA249_RS06005;Name=VA249_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06005 NZ_AP024165.1 Protein Homology CDS 1272701 1272793 . + 0 ID=cds-WP_079878854.1;Parent=gene-VA249_RS06005;Dbxref=Genbank:WP_079878854.1;Name=WP_079878854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06005;product=DUF3265 domain-containing protein;protein_id=WP_079878854.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1272834 1273220 . + . ID=gene-VA249_RS06010;Name=VA249_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06010;old_locus_tag=VYA_11130 NZ_AP024165.1 Protein Homology CDS 1272834 1273220 . + 0 ID=cds-WP_010648800.1;Parent=gene-VA249_RS06010;Dbxref=Genbank:WP_010648800.1;Name=WP_010648800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015868.1;locus_tag=VA249_RS06010;product=NUDIX hydrolase;protein_id=WP_010648800.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1273277 1273327 . + . ID=gene-VA249_RS24200;Name=VA249_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24200 NZ_AP024165.1 Protein Homology CDS 1273277 1273327 . + 0 ID=cds-WP_242598080.1;Parent=gene-VA249_RS24200;Dbxref=Genbank:WP_242598080.1;Name=WP_242598080.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023094.2;locus_tag=VA249_RS24200;product=DUF3265 domain-containing protein;protein_id=WP_242598080.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1273746 1273875 . + . ID=gene-VA249_RS24060;Name=VA249_RS24060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24060;pseudo=true NZ_AP024165.1 Protein Homology CDS 1273746 1273875 . + 0 ID=cds-VA249_RS24060;Parent=gene-VA249_RS24060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464445.1;locus_tag=VA249_RS24060;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1273914 1274546 . + . ID=gene-VA249_RS06020;Name=VA249_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06020;old_locus_tag=VYA_11140 NZ_AP024165.1 GeneMarkS-2+ CDS 1273914 1274546 . + 0 ID=cds-WP_221069349.1;Parent=gene-VA249_RS06020;Dbxref=Genbank:WP_221069349.1;Name=WP_221069349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06020;product=hypothetical protein;protein_id=WP_221069349.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1274696 1275373 . + . ID=gene-VA249_RS06025;Name=VA249_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06025;old_locus_tag=VYA_11150 NZ_AP024165.1 GeneMarkS-2+ CDS 1274696 1275373 . + 0 ID=cds-WP_221069351.1;Parent=gene-VA249_RS06025;Dbxref=Genbank:WP_221069351.1;Name=WP_221069351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06025;product=hypothetical protein;protein_id=WP_221069351.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1275528 1276409 . + . ID=gene-VA249_RS06030;Name=VA249_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06030;old_locus_tag=VYA_11160 NZ_AP024165.1 Protein Homology CDS 1275528 1276409 . + 0 ID=cds-WP_221069353.1;Parent=gene-VA249_RS06030;Dbxref=Genbank:WP_221069353.1;Name=WP_221069353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001221968.1;locus_tag=VA249_RS06030;product=NAD(P)-dependent oxidoreductase;protein_id=WP_221069353.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1276559 1277347 . + . ID=gene-VA249_RS06035;Name=VA249_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06035;old_locus_tag=VYA_11170 NZ_AP024165.1 GeneMarkS-2+ CDS 1276559 1277347 . + 0 ID=cds-WP_221069355.1;Parent=gene-VA249_RS06035;Dbxref=Genbank:WP_221069355.1;Name=WP_221069355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06035;product=hypothetical protein;protein_id=WP_221069355.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1277362 1277454 . + . ID=gene-VA249_RS24065;Name=VA249_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24065 NZ_AP024165.1 Protein Homology CDS 1277362 1277454 . + 0 ID=cds-WP_225927105.1;Parent=gene-VA249_RS24065;Dbxref=Genbank:WP_225927105.1;Name=WP_225927105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004743046.1;locus_tag=VA249_RS24065;product=DUF3265 domain-containing protein;protein_id=WP_225927105.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1277852 1278688 . + . ID=gene-VA249_RS06040;Name=VA249_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06040;old_locus_tag=VYA_11180 NZ_AP024165.1 Protein Homology CDS 1277852 1278688 . + 0 ID=cds-WP_221069357.1;Parent=gene-VA249_RS06040;Dbxref=Genbank:WP_221069357.1;Name=WP_221069357.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022633.2;locus_tag=VA249_RS06040;product=DUF2971 domain-containing protein;protein_id=WP_221069357.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1278703 1278795 . + . ID=gene-VA249_RS06045;Name=VA249_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06045 NZ_AP024165.1 Protein Homology CDS 1278703 1278795 . + 0 ID=cds-WP_005445734.1;Parent=gene-VA249_RS06045;Dbxref=Genbank:WP_005445734.1;Name=WP_005445734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06045;product=DUF3265 domain-containing protein;protein_id=WP_005445734.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1278808 1279958 . - . ID=gene-VA249_RS06050;Name=VA249_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06050 NZ_AP024165.1 Protein Homology CDS 1279721 1279958 . - 0 ID=cds-WP_221069358.1;Parent=gene-VA249_RS06050;Dbxref=Genbank:WP_221069358.1;Name=WP_221069358.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=VA249_RS06050;product=IS3 family transposase;protein_id=WP_221069358.1;transl_table=11 NZ_AP024165.1 Protein Homology CDS 1278808 1279721 . - 2 ID=cds-WP_221069358.1;Parent=gene-VA249_RS06050;Dbxref=Genbank:WP_221069358.1;Name=WP_221069358.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=VA249_RS06050;product=IS3 family transposase;protein_id=WP_221069358.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1280055 1280435 . + . ID=gene-VA249_RS06055;Name=VA249_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06055;old_locus_tag=VYA_11210 NZ_AP024165.1 GeneMarkS-2+ CDS 1280055 1280435 . + 0 ID=cds-WP_104411071.1;Parent=gene-VA249_RS06055;Dbxref=Genbank:WP_104411071.1;Name=WP_104411071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06055;product=hypothetical protein;protein_id=WP_104411071.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1280562 1281077 . + . ID=gene-VA249_RS06060;Name=VA249_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06060;old_locus_tag=VYA_11220 NZ_AP024165.1 Protein Homology CDS 1280562 1281077 . + 0 ID=cds-WP_221069360.1;Parent=gene-VA249_RS06060;Dbxref=Genbank:WP_221069360.1;Name=WP_221069360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017033389.1;locus_tag=VA249_RS06060;product=GNAT family N-acetyltransferase;protein_id=WP_221069360.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1281192 1281860 . + . ID=gene-VA249_RS06065;Name=VA249_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06065;old_locus_tag=VYA_11230 NZ_AP024165.1 GeneMarkS-2+ CDS 1281192 1281860 . + 0 ID=cds-WP_000612320.1;Parent=gene-VA249_RS06065;Dbxref=Genbank:WP_000612320.1;Name=WP_000612320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06065;product=hypothetical protein;protein_id=WP_000612320.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1281875 1281967 . + . ID=gene-VA249_RS06070;Name=VA249_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06070 NZ_AP024165.1 Protein Homology CDS 1281875 1281967 . + 0 ID=cds-WP_086591474.1;Parent=gene-VA249_RS06070;Dbxref=Genbank:WP_086591474.1;Name=WP_086591474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06070;product=DUF3265 domain-containing protein;protein_id=WP_086591474.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1282153 1282368 . + . ID=gene-VA249_RS06075;Name=VA249_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06075;old_locus_tag=VYA_11240 NZ_AP024165.1 Protein Homology CDS 1282153 1282368 . + 0 ID=cds-WP_225927106.1;Parent=gene-VA249_RS06075;Dbxref=Genbank:WP_225927106.1;Name=WP_225927106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448879.1;locus_tag=VA249_RS06075;product=hypothetical protein;protein_id=WP_225927106.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1282490 1282579 . + . ID=gene-VA249_RS06080;Name=VA249_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06080 NZ_AP024165.1 Protein Homology CDS 1282490 1282579 . + 0 ID=cds-WP_071652537.1;Parent=gene-VA249_RS06080;Dbxref=Genbank:WP_071652537.1;Name=WP_071652537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06080;product=DUF3265 domain-containing protein;protein_id=WP_071652537.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1282619 1283125 . + . ID=gene-VA249_RS06085;Name=VA249_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06085;old_locus_tag=VYA_11250 NZ_AP024165.1 GeneMarkS-2+ CDS 1282619 1283125 . + 0 ID=cds-WP_221069365.1;Parent=gene-VA249_RS06085;Dbxref=Genbank:WP_221069365.1;Name=WP_221069365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06085;product=hypothetical protein;protein_id=WP_221069365.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1283147 1283239 . + . ID=gene-VA249_RS06090;Name=VA249_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06090 NZ_AP024165.1 Protein Homology CDS 1283147 1283239 . + 0 ID=cds-WP_077200543.1;Parent=gene-VA249_RS06090;Dbxref=Genbank:WP_077200543.1;Name=WP_077200543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06090;product=DUF3265 domain-containing protein;protein_id=WP_077200543.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1283360 1283641 . - . ID=gene-VA249_RS06095;Name=VA249_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06095 NZ_AP024165.1 Protein Homology CDS 1283360 1283641 . - 0 ID=cds-WP_221069367.1;Parent=gene-VA249_RS06095;Dbxref=Genbank:WP_221069367.1;Name=WP_221069367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821409.1;locus_tag=VA249_RS06095;product=hypothetical protein;protein_id=WP_221069367.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1283767 1283859 . + . ID=gene-VA249_RS06100;Name=VA249_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06100 NZ_AP024165.1 Protein Homology CDS 1283767 1283859 . + 0 ID=cds-WP_005445238.1;Parent=gene-VA249_RS06100;Dbxref=Genbank:WP_005445238.1;Name=WP_005445238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06100;product=DUF3265 domain-containing protein;protein_id=WP_005445238.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1283898 1284428 . + . ID=gene-VA249_RS06105;Name=VA249_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06105;old_locus_tag=VYA_11260 NZ_AP024165.1 GeneMarkS-2+ CDS 1283898 1284428 . + 0 ID=cds-WP_221069370.1;Parent=gene-VA249_RS06105;Dbxref=Genbank:WP_221069370.1;Name=WP_221069370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06105;product=hypothetical protein;protein_id=WP_221069370.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1284443 1284535 . + . ID=gene-VA249_RS06110;Name=VA249_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06110 NZ_AP024165.1 Protein Homology CDS 1284443 1284535 . + 0 ID=cds-WP_203498038.1;Parent=gene-VA249_RS06110;Dbxref=Genbank:WP_203498038.1;Name=WP_203498038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494856.1;locus_tag=VA249_RS06110;product=DUF3265 domain-containing protein;protein_id=WP_203498038.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1284564 1284995 . + . ID=gene-VA249_RS06115;Name=VA249_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06115;old_locus_tag=VYA_11270 NZ_AP024165.1 Protein Homology CDS 1284564 1284995 . + 0 ID=cds-WP_221069372.1;Parent=gene-VA249_RS06115;Dbxref=Genbank:WP_221069372.1;Name=WP_221069372.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080364.1;locus_tag=VA249_RS06115;product=NUDIX domain-containing protein;protein_id=WP_221069372.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1285204 1285506 . - . ID=gene-VA249_RS06120;Name=VA249_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06120 NZ_AP024165.1 Protein Homology CDS 1285204 1285506 . - 0 ID=cds-WP_140336088.1;Parent=gene-VA249_RS06120;Dbxref=Genbank:WP_140336088.1;Name=WP_140336088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821409.1;locus_tag=VA249_RS06120;product=hypothetical protein;protein_id=WP_140336088.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1285635 1285724 . + . ID=gene-VA249_RS06125;Name=VA249_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06125 NZ_AP024165.1 Protein Homology CDS 1285635 1285724 . + 0 ID=cds-WP_074534701.1;Parent=gene-VA249_RS06125;Dbxref=Genbank:WP_074534701.1;Name=WP_074534701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004749163.1;locus_tag=VA249_RS06125;product=DUF3265 domain-containing protein;protein_id=WP_074534701.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1285759 1286211 . + . ID=gene-VA249_RS06130;Name=VA249_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06130;old_locus_tag=VYA_11280 NZ_AP024165.1 Protein Homology CDS 1285759 1286211 . + 0 ID=cds-WP_221069375.1;Parent=gene-VA249_RS06130;Dbxref=Genbank:WP_221069375.1;Name=WP_221069375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005526536.1;locus_tag=VA249_RS06130;product=GNAT family N-acetyltransferase;protein_id=WP_221069375.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1286229 1286318 . + . ID=gene-VA249_RS06135;Name=VA249_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06135 NZ_AP024165.1 Protein Homology CDS 1286229 1286318 . + 0 ID=cds-WP_140203707.1;Parent=gene-VA249_RS06135;Dbxref=Genbank:WP_140203707.1;Name=WP_140203707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06135;product=DUF3265 domain-containing protein;protein_id=WP_140203707.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1286344 1287066 . + . ID=gene-VA249_RS06140;Name=VA249_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06140;old_locus_tag=VYA_11290 NZ_AP024165.1 GeneMarkS-2+ CDS 1286344 1287066 . + 0 ID=cds-WP_076671051.1;Parent=gene-VA249_RS06140;Dbxref=Genbank:WP_076671051.1;Name=WP_076671051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06140;product=hypothetical protein;protein_id=WP_076671051.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1287087 1287179 . + . ID=gene-VA249_RS06145;Name=VA249_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06145 NZ_AP024165.1 Protein Homology CDS 1287087 1287179 . + 0 ID=cds-WP_140104031.1;Parent=gene-VA249_RS06145;Dbxref=Genbank:WP_140104031.1;Name=WP_140104031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06145;product=DUF3265 domain-containing protein;protein_id=WP_140104031.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1287678 1287767 . + . ID=gene-VA249_RS06150;Name=VA249_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06150 NZ_AP024165.1 Protein Homology CDS 1287678 1287767 . + 0 ID=cds-WP_225927117.1;Parent=gene-VA249_RS06150;Dbxref=Genbank:WP_225927117.1;Name=WP_225927117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06150;product=DUF3265 domain-containing protein;protein_id=WP_225927117.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1287796 1288149 . + . ID=gene-VA249_RS06155;Name=VA249_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06155;old_locus_tag=VYA_11300 NZ_AP024165.1 Protein Homology CDS 1287796 1288149 . + 0 ID=cds-WP_041061520.1;Parent=gene-VA249_RS06155;Dbxref=Genbank:WP_041061520.1;Name=WP_041061520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650979.1;locus_tag=VA249_RS06155;product=glyoxalase/bleomycin resistance/dioxygenase family protein;protein_id=WP_041061520.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1288164 1288256 . + . ID=gene-VA249_RS06160;Name=VA249_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06160 NZ_AP024165.1 Protein Homology CDS 1288164 1288256 . + 0 ID=cds-WP_078532186.1;Parent=gene-VA249_RS06160;Dbxref=Genbank:WP_078532186.1;Name=WP_078532186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004418565.1;locus_tag=VA249_RS06160;product=DUF3265 domain-containing protein;protein_id=WP_078532186.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1288293 1288874 . + . ID=gene-VA249_RS06165;Name=VA249_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06165;old_locus_tag=VYA_11310 NZ_AP024165.1 Protein Homology CDS 1288293 1288874 . + 0 ID=cds-WP_221069377.1;Parent=gene-VA249_RS06165;Dbxref=Genbank:WP_221069377.1;Name=WP_221069377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189490.1;locus_tag=VA249_RS06165;product=DJ-1/PfpI family protein;protein_id=WP_221069377.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1288897 1288989 . + . ID=gene-VA249_RS06170;Name=VA249_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06170 NZ_AP024165.1 Protein Homology CDS 1288897 1288989 . + 0 ID=cds-WP_192947844.1;Parent=gene-VA249_RS06170;Dbxref=Genbank:WP_192947844.1;Name=WP_192947844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06170;product=DUF3265 domain-containing protein;protein_id=WP_192947844.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1289519 1289608 . + . ID=gene-VA249_RS06175;Name=VA249_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06175 NZ_AP024165.1 Protein Homology CDS 1289519 1289608 . + 0 ID=cds-WP_072829120.1-4;Parent=gene-VA249_RS06175;Dbxref=Genbank:WP_072829120.1;Name=WP_072829120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06175;product=DUF3265 domain-containing protein;protein_id=WP_072829120.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1289755 1290675 . + . ID=gene-VA249_RS06180;Name=VA249_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06180;old_locus_tag=VYA_11330 NZ_AP024165.1 Protein Homology CDS 1289755 1290675 . + 0 ID=cds-WP_221069379.1;Parent=gene-VA249_RS06180;Dbxref=Genbank:WP_221069379.1;Name=WP_221069379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039499.1;locus_tag=VA249_RS06180;product=DUF5677 domain-containing protein;protein_id=WP_221069379.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1290669 1290782 . + . ID=gene-VA249_RS06185;Name=VA249_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06185 NZ_AP024165.1 Protein Homology CDS 1290669 1290782 . + 0 ID=cds-WP_104027845.1;Parent=gene-VA249_RS06185;Dbxref=Genbank:WP_104027845.1;Name=WP_104027845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464654.1;locus_tag=VA249_RS06185;product=DUF3265 domain-containing protein;protein_id=WP_104027845.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1290821 1291336 . + . ID=gene-VA249_RS06190;Name=VA249_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06190;old_locus_tag=VYA_11340 NZ_AP024165.1 Protein Homology CDS 1290821 1291336 . + 0 ID=cds-WP_221069380.1;Parent=gene-VA249_RS06190;Dbxref=Genbank:WP_221069380.1;Name=WP_221069380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019416.2;locus_tag=VA249_RS06190;product=DUF1643 domain-containing protein;protein_id=WP_221069380.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1291452 1292048 . + . ID=gene-VA249_RS06195;Name=VA249_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06195;old_locus_tag=VYA_11350 NZ_AP024165.1 Protein Homology CDS 1291452 1292048 . + 0 ID=cds-WP_221069382.1;Parent=gene-VA249_RS06195;Dbxref=Genbank:WP_221069382.1;Name=WP_221069382.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296882.1;locus_tag=VA249_RS06195;product=methyltransferase domain-containing protein;protein_id=WP_221069382.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1292289 1292486 . + . ID=gene-VA249_RS06200;Name=VA249_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06200;old_locus_tag=VYA_11360 NZ_AP024165.1 Protein Homology CDS 1292289 1292486 . + 0 ID=cds-WP_054757413.1;Parent=gene-VA249_RS06200;Dbxref=Genbank:WP_054757413.1;Name=WP_054757413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005537014.1;locus_tag=VA249_RS06200;product=hypothetical protein;protein_id=WP_054757413.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1292541 1292630 . + . ID=gene-VA249_RS06205;Name=VA249_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06205 NZ_AP024165.1 Protein Homology CDS 1292541 1292630 . + 0 ID=cds-WP_072829120.1-5;Parent=gene-VA249_RS06205;Dbxref=Genbank:WP_072829120.1;Name=WP_072829120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06205;product=DUF3265 domain-containing protein;protein_id=WP_072829120.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1293149 1293238 . + . ID=gene-VA249_RS06210;Name=VA249_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06210 NZ_AP024165.1 Protein Homology CDS 1293149 1293238 . + 0 ID=cds-WP_074531724.1;Parent=gene-VA249_RS06210;Dbxref=Genbank:WP_074531724.1;Name=WP_074531724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06210;product=DUF3265 domain-containing protein;protein_id=WP_074531724.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1293265 1293828 . + . ID=gene-VA249_RS06215;Name=VA249_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06215 NZ_AP024165.1 Protein Homology CDS 1293265 1293828 . + 0 ID=cds-WP_221069384.1;Parent=gene-VA249_RS06215;Dbxref=Genbank:WP_221069384.1;Name=WP_221069384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448810.1;locus_tag=VA249_RS06215;product=hypothetical protein;protein_id=WP_221069384.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1293849 1293941 . + . ID=gene-VA249_RS06220;Name=VA249_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06220 NZ_AP024165.1 Protein Homology CDS 1293849 1293941 . + 0 ID=cds-WP_193343211.1;Parent=gene-VA249_RS06220;Dbxref=Genbank:WP_193343211.1;Name=WP_193343211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494856.1;locus_tag=VA249_RS06220;product=DUF3265 domain-containing protein;protein_id=WP_193343211.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1293976 1294782 . + . ID=gene-VA249_RS06225;Name=VA249_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06225;old_locus_tag=VYA_11380 NZ_AP024165.1 Protein Homology CDS 1293976 1294782 . + 0 ID=cds-WP_221069394.1;Parent=gene-VA249_RS06225;Dbxref=Genbank:WP_221069394.1;Name=WP_221069394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017090703.1;locus_tag=VA249_RS06225;product=hypothetical protein;protein_id=WP_221069394.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1294803 1294895 . + . ID=gene-VA249_RS06230;Name=VA249_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06230 NZ_AP024165.1 Protein Homology CDS 1294803 1294895 . + 0 ID=cds-WP_080277110.1;Parent=gene-VA249_RS06230;Dbxref=Genbank:WP_080277110.1;Name=WP_080277110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004418565.1;locus_tag=VA249_RS06230;product=DUF3265 domain-containing protein;protein_id=WP_080277110.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1294998 1295330 . + . ID=gene-VA249_RS06235;Name=VA249_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06235;old_locus_tag=VYA_11390 NZ_AP024165.1 Protein Homology CDS 1294998 1295330 . + 0 ID=cds-WP_012600340.1;Parent=gene-VA249_RS06235;Dbxref=Genbank:WP_012600340.1;Name=WP_012600340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600340.1;locus_tag=VA249_RS06235;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012600340.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1295317 1295631 . + . ID=gene-VA249_RS06240;Name=VA249_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06240;old_locus_tag=VYA_11400 NZ_AP024165.1 Protein Homology CDS 1295317 1295631 . + 0 ID=cds-WP_017049537.1;Parent=gene-VA249_RS06240;Dbxref=Genbank:WP_017049537.1;Name=WP_017049537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071008.1;locus_tag=VA249_RS06240;product=DNA-binding transcriptional regulator;protein_id=WP_017049537.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1295646 1295738 . + . ID=gene-VA249_RS06245;Name=VA249_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06245 NZ_AP024165.1 Protein Homology CDS 1295646 1295738 . + 0 ID=cds-WP_012841671.1;Parent=gene-VA249_RS06245;Dbxref=Genbank:WP_012841671.1;Name=WP_012841671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06245;product=DUF3265 domain-containing protein;protein_id=WP_012841671.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1295830 1296075 . + . ID=gene-VA249_RS06250;Name=VA249_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06250;old_locus_tag=VYA_11410 NZ_AP024165.1 GeneMarkS-2+ CDS 1295830 1296075 . + 0 ID=cds-WP_077261314.1;Parent=gene-VA249_RS06250;Dbxref=Genbank:WP_077261314.1;Name=WP_077261314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06250;product=hypothetical protein;protein_id=WP_077261314.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1296072 1296182 . + . ID=gene-VA249_RS06255;Name=VA249_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06255 NZ_AP024165.1 Protein Homology CDS 1296072 1296182 . + 0 ID=cds-WP_077262477.1;Parent=gene-VA249_RS06255;Dbxref=Genbank:WP_077262477.1;Name=WP_077262477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483184.1;locus_tag=VA249_RS06255;product=DUF3265 domain-containing protein;protein_id=WP_077262477.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1296219 1297040 . + . ID=gene-VA249_RS06260;Name=VA249_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06260;old_locus_tag=VYA_11420 NZ_AP024165.1 Protein Homology CDS 1296219 1297040 . + 0 ID=cds-WP_221069396.1;Parent=gene-VA249_RS06260;Dbxref=Genbank:WP_221069396.1;Name=WP_221069396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464673.1;locus_tag=VA249_RS06260;product=phospholipase D-like domain-containing protein;protein_id=WP_221069396.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1297187 1297885 . + . ID=gene-VA249_RS06265;Name=VA249_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06265;old_locus_tag=VYA_11430 NZ_AP024165.1 GeneMarkS-2+ CDS 1297187 1297885 . + 0 ID=cds-WP_221069398.1;Parent=gene-VA249_RS06265;Dbxref=Genbank:WP_221069398.1;Name=WP_221069398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06265;product=hypothetical protein;protein_id=WP_221069398.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1298025 1298420 . + . ID=gene-VA249_RS06270;Name=VA249_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06270;old_locus_tag=VYA_11440 NZ_AP024165.1 Protein Homology CDS 1298025 1298420 . + 0 ID=cds-WP_225927118.1;Parent=gene-VA249_RS06270;Dbxref=Genbank:WP_225927118.1;Name=WP_225927118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022019.2;locus_tag=VA249_RS06270;product=GIY-YIG nuclease family protein;protein_id=WP_225927118.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1298457 1298546 . + . ID=gene-VA249_RS06275;Name=VA249_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06275 NZ_AP024165.1 Protein Homology CDS 1298457 1298546 . + 0 ID=cds-WP_079766072.1;Parent=gene-VA249_RS06275;Dbxref=Genbank:WP_079766072.1;Name=WP_079766072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06275;product=DUF3265 domain-containing protein;protein_id=WP_079766072.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1298673 1298960 . + . ID=gene-VA249_RS06280;Name=VA249_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06280;old_locus_tag=VYA_11450 NZ_AP024165.1 GeneMarkS-2+ CDS 1298673 1298960 . + 0 ID=cds-WP_017817947.1;Parent=gene-VA249_RS06280;Dbxref=Genbank:WP_017817947.1;Name=WP_017817947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06280;product=hypothetical protein;protein_id=WP_017817947.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1299145 1299744 . + . ID=gene-VA249_RS06285;Name=VA249_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06285;old_locus_tag=VYA_11460 NZ_AP024165.1 GeneMarkS-2+ CDS 1299145 1299744 . + 0 ID=cds-WP_221069402.1;Parent=gene-VA249_RS06285;Dbxref=Genbank:WP_221069402.1;Name=WP_221069402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06285;product=hypothetical protein;protein_id=WP_221069402.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1299771 1299863 . + . ID=gene-VA249_RS06290;Name=VA249_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06290 NZ_AP024165.1 Protein Homology CDS 1299771 1299863 . + 0 ID=cds-WP_213872838.1;Parent=gene-VA249_RS06290;Dbxref=Genbank:WP_213872838.1;Name=WP_213872838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06290;product=DUF3265 domain-containing protein;protein_id=WP_213872838.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1299907 1300644 . + . ID=gene-VA249_RS06295;Name=VA249_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06295;old_locus_tag=VYA_11470 NZ_AP024165.1 Protein Homology CDS 1299907 1300644 . + 0 ID=cds-WP_221069405.1;Parent=gene-VA249_RS06295;Dbxref=Genbank:WP_221069405.1;Name=WP_221069405.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231185.1;locus_tag=VA249_RS06295;product=HNH endonuclease;protein_id=WP_221069405.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1300758 1301375 . + . ID=gene-VA249_RS06300;Name=VA249_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06300;old_locus_tag=VYA_11480 NZ_AP024165.1 Protein Homology CDS 1300758 1301375 . + 0 ID=cds-WP_221069407.1;Parent=gene-VA249_RS06300;Dbxref=Genbank:WP_221069407.1;Name=WP_221069407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004416934.1;locus_tag=VA249_RS06300;product=LysE family translocator;protein_id=WP_221069407.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1301396 1301488 . + . ID=gene-VA249_RS06305;Name=VA249_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06305 NZ_AP024165.1 Protein Homology CDS 1301396 1301488 . + 0 ID=cds-WP_079879201.1;Parent=gene-VA249_RS06305;Dbxref=Genbank:WP_079879201.1;Name=WP_079879201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06305;product=DUF3265 domain-containing protein;protein_id=WP_079879201.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1301606 1302058 . + . ID=gene-VA249_RS06310;Name=VA249_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06310;old_locus_tag=VYA_11490 NZ_AP024165.1 Protein Homology CDS 1301606 1302058 . + 0 ID=cds-WP_042603355.1;Parent=gene-VA249_RS06310;Dbxref=Genbank:WP_042603355.1;Name=WP_042603355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017419583.1;locus_tag=VA249_RS06310;product=hypothetical protein;protein_id=WP_042603355.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1302055 1302543 . + . ID=gene-VA249_RS06315;Name=VA249_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06315;old_locus_tag=VYA_11500 NZ_AP024165.1 GeneMarkS-2+ CDS 1302055 1302543 . + 0 ID=cds-WP_039977134.1;Parent=gene-VA249_RS06315;Dbxref=Genbank:WP_039977134.1;Name=WP_039977134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06315;product=hypothetical protein;protein_id=WP_039977134.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1302704 1303090 . + . ID=gene-VA249_RS06320;Name=VA249_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06320;old_locus_tag=VYA_11510 NZ_AP024165.1 Protein Homology CDS 1302704 1303090 . + 0 ID=cds-WP_010648800.1-2;Parent=gene-VA249_RS06320;Dbxref=Genbank:WP_010648800.1;Name=WP_010648800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015868.1;locus_tag=VA249_RS06320;product=NUDIX hydrolase;protein_id=WP_010648800.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1303081 1303152 . + . ID=gene-VA249_RS24070;Name=VA249_RS24070;end_range=1303152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24070;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1303081 1303152 . + 0 ID=cds-VA249_RS24070;Parent=gene-VA249_RS24070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1303152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821989.1;locus_tag=VA249_RS24070;partial=true;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1303269 1303631 . + . ID=gene-VA249_RS06325;Name=VA249_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06325;old_locus_tag=VYA_11520 NZ_AP024165.1 GeneMarkS-2+ CDS 1303269 1303631 . + 0 ID=cds-WP_038899247.1;Parent=gene-VA249_RS06325;Dbxref=Genbank:WP_038899247.1;Name=WP_038899247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06325;product=hypothetical protein;protein_id=WP_038899247.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1303652 1303744 . + . ID=gene-VA249_RS06330;Name=VA249_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06330 NZ_AP024165.1 Protein Homology CDS 1303652 1303744 . + 0 ID=cds-WP_221069409.1;Parent=gene-VA249_RS06330;Dbxref=Genbank:WP_221069409.1;Name=WP_221069409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06330;product=DUF3265 domain-containing protein;protein_id=WP_221069409.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1303775 1303966 . + . ID=gene-VA249_RS06335;Name=VA249_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06335;old_locus_tag=VYA_11530 NZ_AP024165.1 GeneMarkS-2+ CDS 1303775 1303966 . + 0 ID=cds-WP_221069411.1;Parent=gene-VA249_RS06335;Dbxref=Genbank:WP_221069411.1;Name=WP_221069411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06335;product=hypothetical protein;protein_id=WP_221069411.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1303975 1305125 . - . ID=gene-VA249_RS06340;Name=VA249_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06340 NZ_AP024165.1 Protein Homology CDS 1304888 1305125 . - 0 ID=cds-WP_221069358.1-2;Parent=gene-VA249_RS06340;Dbxref=Genbank:WP_221069358.1;Name=WP_221069358.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=VA249_RS06340;product=IS3 family transposase;protein_id=WP_221069358.1;transl_table=11 NZ_AP024165.1 Protein Homology CDS 1303975 1304888 . - 2 ID=cds-WP_221069358.1-2;Parent=gene-VA249_RS06340;Dbxref=Genbank:WP_221069358.1;Name=WP_221069358.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=VA249_RS06340;product=IS3 family transposase;protein_id=WP_221069358.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1305236 1305508 . + . ID=gene-VA249_RS06345;Name=VA249_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06345;old_locus_tag=VYA_11560 NZ_AP024165.1 Protein Homology CDS 1305236 1305508 . + 0 ID=cds-WP_242598081.1;Parent=gene-VA249_RS06345;Dbxref=Genbank:WP_242598081.1;Name=WP_242598081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=VA249_RS06345;product=GNAT family N-acetyltransferase;protein_id=WP_242598081.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1305484 1305645 . + . ID=gene-VA249_RS06350;Name=VA249_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06350 NZ_AP024165.1 Protein Homology CDS 1305484 1305645 . + 0 ID=cds-WP_225927119.1;Parent=gene-VA249_RS06350;Dbxref=Genbank:WP_225927119.1;Name=WP_225927119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017049685.1;locus_tag=VA249_RS06350;product=DUF3265 domain-containing protein;protein_id=WP_225927119.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1305658 1306158 . + . ID=gene-VA249_RS06355;Name=VA249_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06355;old_locus_tag=VYA_11570 NZ_AP024165.1 GeneMarkS-2+ CDS 1305658 1306158 . + 0 ID=cds-WP_221069413.1;Parent=gene-VA249_RS06355;Dbxref=Genbank:WP_221069413.1;Name=WP_221069413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06355;product=hypothetical protein;protein_id=WP_221069413.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1306188 1306278 . + . ID=gene-VA249_RS06360;Name=VA249_RS06360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS06360;pseudo=true NZ_AP024165.1 Protein Homology CDS 1306188 1306278 . + 0 ID=cds-VA249_RS06360;Parent=gene-VA249_RS06360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06360;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1306335 1307717 . - . ID=gene-VA249_RS06365;Name=VA249_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06365;old_locus_tag=VYA_11580 NZ_AP024165.1 GeneMarkS-2+ CDS 1306335 1307717 . - 0 ID=cds-WP_221069415.1;Parent=gene-VA249_RS06365;Dbxref=Genbank:WP_221069415.1;Name=WP_221069415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06365;product=hypothetical protein;protein_id=WP_221069415.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1307719 1308918 . - . ID=gene-VA249_RS06370;Name=VA249_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06370;old_locus_tag=VYA_11590 NZ_AP024165.1 GeneMarkS-2+ CDS 1307719 1308918 . - 0 ID=cds-WP_221069417.1;Parent=gene-VA249_RS06370;Dbxref=Genbank:WP_221069417.1;Name=WP_221069417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06370;product=hypothetical protein;protein_id=WP_221069417.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1309160 1309408 . + . ID=gene-VA249_RS06375;Name=VA249_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06375;old_locus_tag=VYA_11600 NZ_AP024165.1 Protein Homology CDS 1309160 1309408 . + 0 ID=cds-WP_225927107.1;Parent=gene-VA249_RS06375;Dbxref=Genbank:WP_225927107.1;Name=WP_225927107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452033.1;locus_tag=VA249_RS06375;product=ASCH domain-containing protein;protein_id=WP_225927107.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1310045 1310392 . + . ID=gene-VA249_RS06380;Name=VA249_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06380;old_locus_tag=VYA_11610 NZ_AP024165.1 Protein Homology CDS 1310045 1310392 . + 0 ID=cds-WP_203508314.1;Parent=gene-VA249_RS06380;Dbxref=Genbank:WP_203508314.1;Name=WP_203508314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005537313.1;locus_tag=VA249_RS06380;product=zinc ribbon domain-containing protein;protein_id=WP_203508314.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1310418 1310510 . + . ID=gene-VA249_RS06385;Name=VA249_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06385 NZ_AP024165.1 Protein Homology CDS 1310418 1310510 . + 0 ID=cds-WP_004418565.1;Parent=gene-VA249_RS06385;Dbxref=Genbank:WP_004418565.1;Name=WP_004418565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06385;product=DUF3265 domain-containing protein;protein_id=WP_004418565.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1310601 1310882 . + . ID=gene-VA249_RS06390;Name=VA249_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06390;old_locus_tag=VYA_11620 NZ_AP024165.1 Protein Homology CDS 1310601 1310882 . + 0 ID=cds-WP_025633738.1;Parent=gene-VA249_RS06390;Dbxref=Genbank:WP_025633738.1;Name=WP_025633738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086652.1;locus_tag=VA249_RS06390;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_025633738.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1310879 1311166 . + . ID=gene-VA249_RS06395;Name=VA249_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06395;old_locus_tag=VYA_11630 NZ_AP024165.1 Protein Homology CDS 1310879 1311166 . + 0 ID=cds-WP_017046277.1;Parent=gene-VA249_RS06395;Dbxref=Genbank:WP_017046277.1;Name=WP_017046277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869988.1;locus_tag=VA249_RS06395;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_017046277.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1311338 1312072 . - . ID=gene-VA249_RS06400;Name=VA249_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06400;old_locus_tag=VYA_11640 NZ_AP024165.1 GeneMarkS-2+ CDS 1311338 1312072 . - 0 ID=cds-WP_221069419.1;Parent=gene-VA249_RS06400;Dbxref=Genbank:WP_221069419.1;Name=WP_221069419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06400;product=hypothetical protein;protein_id=WP_221069419.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1312299 1312715 . + . ID=gene-VA249_RS06405;Name=VA249_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06405;old_locus_tag=VYA_11650 NZ_AP024165.1 Protein Homology CDS 1312299 1312715 . + 0 ID=cds-WP_050907381.1;Parent=gene-VA249_RS06405;Dbxref=Genbank:WP_050907381.1;Name=WP_050907381.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733871.1;locus_tag=VA249_RS06405;product=GNAT family N-acetyltransferase;protein_id=WP_050907381.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1312874 1313287 . + . ID=gene-VA249_RS06410;Name=VA249_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06410;old_locus_tag=VYA_11660 NZ_AP024165.1 Protein Homology CDS 1312874 1313287 . + 0 ID=cds-WP_130341096.1;Parent=gene-VA249_RS06410;Dbxref=Genbank:WP_130341096.1;Name=WP_130341096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420535.1;locus_tag=VA249_RS06410;product=hypothetical protein;protein_id=WP_130341096.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1313324 1313413 . + . ID=gene-VA249_RS06415;Name=VA249_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06415 NZ_AP024165.1 Protein Homology CDS 1313324 1313413 . + 0 ID=cds-WP_221069840.1;Parent=gene-VA249_RS06415;Dbxref=Genbank:WP_221069840.1;Name=WP_221069840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004749163.1;locus_tag=VA249_RS06415;product=DUF3265 domain-containing protein;protein_id=WP_221069840.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1313440 1313955 . + . ID=gene-VA249_RS06420;Name=VA249_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06420;old_locus_tag=VYA_11670 NZ_AP024165.1 Protein Homology CDS 1313440 1313955 . + 0 ID=cds-WP_221069421.1;Parent=gene-VA249_RS06420;Dbxref=Genbank:WP_221069421.1;Name=WP_221069421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445228.1;locus_tag=VA249_RS06420;product=GNAT family N-acetyltransferase;protein_id=WP_221069421.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1313956 1314018 . + . ID=gene-VA249_RS24075;Name=VA249_RS24075;end_range=1314018,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24075;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1313956 1314018 . + 0 ID=cds-VA249_RS24075;Parent=gene-VA249_RS24075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1314018,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483184.1;locus_tag=VA249_RS24075;partial=true;product=DUF3265 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1313994 1314071 . + . ID=gene-VA249_RS24080;Name=VA249_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24080 NZ_AP024165.1 Protein Homology CDS 1313994 1314071 . + 0 ID=cds-WP_079884017.1;Parent=gene-VA249_RS24080;Dbxref=Genbank:WP_079884017.1;Name=WP_079884017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023094.2;locus_tag=VA249_RS24080;product=DUF3265 domain-containing protein;protein_id=WP_079884017.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1314105 1314830 . + . ID=gene-VA249_RS06430;Name=VA249_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06430;old_locus_tag=VYA_11680 NZ_AP024165.1 GeneMarkS-2+ CDS 1314105 1314830 . + 0 ID=cds-WP_050935566.1;Parent=gene-VA249_RS06430;Dbxref=Genbank:WP_050935566.1;Name=WP_050935566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06430;product=hypothetical protein;protein_id=WP_050935566.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1314845 1314937 . + . ID=gene-VA249_RS24085;Name=VA249_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24085 NZ_AP024165.1 Protein Homology CDS 1314845 1314937 . + 0 ID=cds-WP_225927108.1;Parent=gene-VA249_RS24085;Dbxref=Genbank:WP_225927108.1;Name=WP_225927108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005500293.1;locus_tag=VA249_RS24085;product=DUF3265 domain-containing protein;protein_id=WP_225927108.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1314987 1315457 . + . ID=gene-VA249_RS06435;Name=VA249_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06435;old_locus_tag=VYA_11690 NZ_AP024165.1 Protein Homology CDS 1314987 1315457 . + 0 ID=cds-WP_065646338.1;Parent=gene-VA249_RS06435;Dbxref=Genbank:WP_065646338.1;Name=WP_065646338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448233.1;locus_tag=VA249_RS06435;product=GNAT family N-acetyltransferase;protein_id=WP_065646338.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1315487 1315579 . + . ID=gene-VA249_RS06440;Name=VA249_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06440 NZ_AP024165.1 Protein Homology CDS 1315487 1315579 . + 0 ID=cds-WP_083135941.1;Parent=gene-VA249_RS06440;Dbxref=Genbank:WP_083135941.1;Name=WP_083135941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06440;product=DUF3265 domain-containing protein;protein_id=WP_083135941.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1316109 1316198 . + . ID=gene-VA249_RS06445;Name=VA249_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06445 NZ_AP024165.1 Protein Homology CDS 1316109 1316198 . + 0 ID=cds-WP_072829120.1-6;Parent=gene-VA249_RS06445;Dbxref=Genbank:WP_072829120.1;Name=WP_072829120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004402681.1;locus_tag=VA249_RS06445;product=DUF3265 domain-containing protein;protein_id=WP_072829120.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1316306 1317112 . + . ID=gene-VA249_RS06450;Name=VA249_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06450;old_locus_tag=VYA_11700 NZ_AP024165.1 GeneMarkS-2+ CDS 1316306 1317112 . + 0 ID=cds-WP_221069423.1;Parent=gene-VA249_RS06450;Dbxref=Genbank:WP_221069423.1;Name=WP_221069423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06450;product=hypothetical protein;protein_id=WP_221069423.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1317112 1317939 . + . ID=gene-VA249_RS06455;Name=VA249_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06455;old_locus_tag=VYA_11710 NZ_AP024165.1 Protein Homology CDS 1317112 1317939 . + 0 ID=cds-WP_221069425.1;Parent=gene-VA249_RS06455;Dbxref=Genbank:WP_221069425.1;Name=WP_221069425.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022681.2;locus_tag=VA249_RS06455;product=DUF3037 domain-containing protein;protein_id=WP_221069425.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1318129 1318506 . + . ID=gene-VA249_RS06460;Name=VA249_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06460;old_locus_tag=VYA_11720 NZ_AP024165.1 GeneMarkS-2+ CDS 1318129 1318506 . + 0 ID=cds-WP_041061568.1;Parent=gene-VA249_RS06460;Dbxref=Genbank:WP_041061568.1;Name=WP_041061568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06460;product=hypothetical protein;protein_id=WP_041061568.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1318532 1319500 . - . ID=gene-VA249_RS06465;Name=VA249_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06465;old_locus_tag=VYA_11730 NZ_AP024165.1 Protein Homology CDS 1318532 1319500 . - 0 ID=cds-WP_221069427.1;Parent=gene-VA249_RS06465;Dbxref=Genbank:WP_221069427.1;Name=WP_221069427.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611895.1;locus_tag=VA249_RS06465;product=IS30 family transposase;protein_id=WP_221069427.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1319655 1320101 . + . ID=gene-VA249_RS06470;Name=VA249_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06470;old_locus_tag=VYA_11740 NZ_AP024165.1 Protein Homology CDS 1319655 1320101 . + 0 ID=cds-WP_221069428.1;Parent=gene-VA249_RS06470;Dbxref=Genbank:WP_221069428.1;Name=WP_221069428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199339.1;locus_tag=VA249_RS06470;product=GNAT family N-acetyltransferase;protein_id=WP_221069428.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1320304 1320873 . + . ID=gene-VA249_RS06475;Name=VA249_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06475;old_locus_tag=VYA_11750 NZ_AP024165.1 Protein Homology CDS 1320304 1320873 . + 0 ID=cds-WP_221069430.1;Parent=gene-VA249_RS06475;Dbxref=Genbank:WP_221069430.1;Name=WP_221069430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013964.2;locus_tag=VA249_RS06475;product=HNH endonuclease;protein_id=WP_221069430.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1321189 1322607 . + . ID=gene-VA249_RS06480;Name=VA249_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06480;old_locus_tag=VYA_11760 NZ_AP024165.1 Protein Homology CDS 1321189 1322607 . + 0 ID=cds-WP_221069432.1;Parent=gene-VA249_RS06480;Dbxref=Genbank:WP_221069432.1;Name=WP_221069432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195953.1;locus_tag=VA249_RS06480;product=SLC13 family permease;protein_id=WP_221069432.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1322611 1323948 . + . ID=gene-VA249_RS06485;Name=VA249_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06485;old_locus_tag=VYA_11770 NZ_AP024165.1 Protein Homology CDS 1322611 1323948 . + 0 ID=cds-WP_221069434.1;Parent=gene-VA249_RS06485;Dbxref=Genbank:WP_221069434.1;Name=WP_221069434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016797490.1;locus_tag=VA249_RS06485;product=ATP-binding protein;protein_id=WP_221069434.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1323935 1324408 . + . ID=gene-VA249_RS06490;Name=VA249_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06490;old_locus_tag=VYA_11780 NZ_AP024165.1 Protein Homology CDS 1323935 1324408 . + 0 ID=cds-WP_221069436.1;Parent=gene-VA249_RS06490;Dbxref=Genbank:WP_221069436.1;Name=WP_221069436.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016789231.1;locus_tag=VA249_RS06490;product=response regulator;protein_id=WP_221069436.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1324542 1326272 . - . ID=gene-VA249_RS06495;Name=VA249_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06495;old_locus_tag=VYA_11790 NZ_AP024165.1 Protein Homology CDS 1324542 1326272 . - 0 ID=cds-WP_221069842.1;Parent=gene-VA249_RS06495;Dbxref=Genbank:WP_221069842.1;Name=WP_221069842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442072.1;locus_tag=VA249_RS06495;product=EAL domain-containing protein;protein_id=WP_221069842.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1326668 1327879 . + . ID=gene-VA249_RS06500;Name=VA249_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06500;old_locus_tag=VYA_11800 NZ_AP024165.1 Protein Homology CDS 1326668 1327879 . + 0 ID=cds-WP_221069438.1;Parent=gene-VA249_RS06500;Dbxref=Genbank:WP_221069438.1;Name=WP_221069438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434020.1;locus_tag=VA249_RS06500;product=HD-GYP domain-containing protein;protein_id=WP_221069438.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1328116 1328742 . + . ID=gene-VA249_RS06505;Name=VA249_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06505;old_locus_tag=VYA_11810 NZ_AP024165.1 Protein Homology CDS 1328116 1328742 . + 0 ID=cds-WP_221069844.1;Parent=gene-VA249_RS06505;Dbxref=Genbank:WP_221069844.1;Name=WP_221069844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019824822.1;locus_tag=VA249_RS06505;product=LysE family translocator;protein_id=WP_221069844.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1328996 1330540 . + . ID=gene-VA249_RS06510;Name=VA249_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06510;old_locus_tag=VYA_11820 NZ_AP024165.1 Protein Homology CDS 1328996 1330540 . + 0 ID=cds-WP_221069440.1;Parent=gene-VA249_RS06510;Dbxref=Genbank:WP_221069440.1;Name=WP_221069440.1;Ontology_term=GO:0008150,GO:0003824,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195949.1;locus_tag=VA249_RS06510;product=YjjI family glycine radical enzyme;protein_id=WP_221069440.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1330562 1331443 . + . ID=gene-VA249_RS06515;Name=VA249_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06515 NZ_AP024165.1 Protein Homology CDS 1330562 1331443 . + 0 ID=cds-WP_221069443.1;Parent=gene-VA249_RS06515;Dbxref=Genbank:WP_221069443.1;Name=WP_221069443.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005495268.1;locus_tag=VA249_RS06515;product=YjjW family glycine radical enzyme activase;protein_id=WP_221069443.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1331483 1332418 . - . ID=gene-VA249_RS06520;Name=VA249_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06520;old_locus_tag=VYA_11840 NZ_AP024165.1 Protein Homology CDS 1331483 1332418 . - 0 ID=cds-WP_221069444.1;Parent=gene-VA249_RS06520;Dbxref=Genbank:WP_221069444.1;Name=WP_221069444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005377737.1;locus_tag=VA249_RS06520;product=LysR family transcriptional regulator;protein_id=WP_221069444.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1332757 1333524 . + . ID=gene-VA249_RS06525;Name=VA249_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06525;old_locus_tag=VYA_11850 NZ_AP024165.1 Protein Homology CDS 1332757 1333524 . + 0 ID=cds-WP_221069446.1;Parent=gene-VA249_RS06525;Dbxref=Genbank:WP_221069446.1;Name=WP_221069446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442093.1;locus_tag=VA249_RS06525;product=TerC family protein;protein_id=WP_221069446.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1333709 1334311 . + . ID=gene-VA249_RS06530;Name=VA249_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06530;old_locus_tag=VYA_11860 NZ_AP024165.1 Protein Homology CDS 1333709 1334311 . + 0 ID=cds-WP_211919356.1;Parent=gene-VA249_RS06530;Dbxref=Genbank:WP_211919356.1;Name=WP_211919356.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019824666.1;locus_tag=VA249_RS06530;product=2OG-Fe(II) oxygenase;protein_id=WP_211919356.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1334502 1335695 . + . ID=gene-VA249_RS06535;Name=VA249_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06535;old_locus_tag=VYA_11870 NZ_AP024165.1 Protein Homology CDS 1334502 1335695 . + 0 ID=cds-WP_221069448.1;Parent=gene-VA249_RS06535;Dbxref=Genbank:WP_221069448.1;Name=WP_221069448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448497.1;locus_tag=VA249_RS06535;product=iron-containing alcohol dehydrogenase;protein_id=WP_221069448.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1335868 1337073 . + . ID=gene-VA249_RS06540;Name=VA249_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06540;old_locus_tag=VYA_11880 NZ_AP024165.1 Protein Homology CDS 1335868 1337073 . + 0 ID=cds-WP_128811019.1;Parent=gene-VA249_RS06540;Dbxref=Genbank:WP_128811019.1;Name=WP_128811019.1;Ontology_term=GO:0015801,GO:0015173,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002031484.1;locus_tag=VA249_RS06540;product=aromatic amino acid transporter;protein_id=WP_128811019.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1337328 1338452 . + . ID=gene-VA249_RS06545;Name=VA249_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06545;old_locus_tag=VYA_11890 NZ_AP024165.1 Protein Homology CDS 1337328 1338452 . + 0 ID=cds-WP_221069450.1;Parent=gene-VA249_RS06545;Dbxref=Genbank:WP_221069450.1;Name=WP_221069450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704252.1;locus_tag=VA249_RS06545;product=c-di-GMP phosphodiesterase;protein_id=WP_221069450.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1338540 1338755 . + . ID=gene-VA249_RS06550;Name=VA249_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06550;old_locus_tag=VYA_11900 NZ_AP024165.1 Protein Homology CDS 1338540 1338755 . + 0 ID=cds-WP_128811017.1;Parent=gene-VA249_RS06550;Dbxref=Genbank:WP_128811017.1;Name=WP_128811017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433984.1;locus_tag=VA249_RS06550;product=hypothetical protein;protein_id=WP_128811017.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1338955 1339503 . - . ID=gene-VA249_RS06555;Name=VA249_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06555;old_locus_tag=VYA_11910 NZ_AP024165.1 Protein Homology CDS 1338955 1339503 . - 0 ID=cds-WP_211919348.1;Parent=gene-VA249_RS06555;Dbxref=Genbank:WP_211919348.1;Name=WP_211919348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819469.1;locus_tag=VA249_RS06555;product=hypothetical protein;protein_id=WP_211919348.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1339940 1341718 . - . ID=gene-VA249_RS06560;Name=VA249_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06560;old_locus_tag=VYA_11920 NZ_AP024165.1 Protein Homology CDS 1339940 1341718 . - 0 ID=cds-WP_221069452.1;Parent=gene-VA249_RS06560;Dbxref=Genbank:WP_221069452.1;Name=WP_221069452.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433738.1;locus_tag=VA249_RS06560;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_221069452.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1341722 1343461 . - . ID=gene-VA249_RS06565;Name=VA249_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06565;old_locus_tag=VYA_11930 NZ_AP024165.1 Protein Homology CDS 1341722 1343461 . - 0 ID=cds-WP_221069442.1;Parent=gene-VA249_RS06565;Dbxref=Genbank:WP_221069442.1;Name=WP_221069442.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820635.1;locus_tag=VA249_RS06565;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_221069442.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1343748 1344434 . - . ID=gene-VA249_RS06570;Name=VA249_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06570;old_locus_tag=VYA_11940 NZ_AP024165.1 Protein Homology CDS 1343748 1344434 . - 0 ID=cds-WP_221069455.1;Parent=gene-VA249_RS06570;Dbxref=Genbank:WP_221069455.1;Name=WP_221069455.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820640.1;locus_tag=VA249_RS06570;product=DNA-3-methyladenine glycosylase I;protein_id=WP_221069455.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1344521 1344715 . + . ID=gene-VA249_RS06575;Name=VA249_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06575;old_locus_tag=VYA_11950 NZ_AP024165.1 Protein Homology CDS 1344521 1344715 . + 0 ID=cds-WP_164837191.1;Parent=gene-VA249_RS06575;Dbxref=Genbank:WP_164837191.1;Name=WP_164837191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533849.1;locus_tag=VA249_RS06575;product=hypothetical protein;protein_id=WP_164837191.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1344809 1347634 . - . ID=gene-VA249_RS06580;Name=VA249_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06580;old_locus_tag=VYA_11960 NZ_AP024165.1 Protein Homology CDS 1344809 1347634 . - 0 ID=cds-WP_221069457.1;Parent=gene-VA249_RS06580;Dbxref=Genbank:WP_221069457.1;Name=WP_221069457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649706.1;locus_tag=VA249_RS06580;product=Hsp70 family protein;protein_id=WP_221069457.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1347690 1349654 . - . ID=gene-VA249_RS06585;Name=VA249_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06585;old_locus_tag=VYA_11970 NZ_AP024165.1 Protein Homology CDS 1347690 1349654 . - 0 ID=cds-WP_221069459.1;Parent=gene-VA249_RS06585;Dbxref=Genbank:WP_221069459.1;Name=WP_221069459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005389476.1;locus_tag=VA249_RS06585;product=Hsp70 family protein;protein_id=WP_221069459.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1349654 1350286 . - . ID=gene-VA249_RS06590;Name=VA249_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06590;old_locus_tag=VYA_11980 NZ_AP024165.1 Protein Homology CDS 1349654 1350286 . - 0 ID=cds-WP_221069433.1;Parent=gene-VA249_RS06590;Dbxref=Genbank:WP_221069433.1;Name=WP_221069433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734741.1;locus_tag=VA249_RS06590;product=DUF2760 domain-containing protein;protein_id=WP_221069433.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1350575 1352116 . + . ID=gene-VA249_RS06595;Name=VA249_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06595;old_locus_tag=VYA_11990 NZ_AP024165.1 Protein Homology CDS 1350575 1352116 . + 0 ID=cds-WP_221069431.1;Parent=gene-VA249_RS06595;Dbxref=Genbank:WP_221069431.1;Name=WP_221069431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698075.1;locus_tag=VA249_RS06595;product=sensor domain-containing diguanylate cyclase;protein_id=WP_221069431.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1352198 1352728 . + . ID=gene-VA249_RS06600;Name=VA249_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06600;old_locus_tag=VYA_12000 NZ_AP024165.1 Protein Homology CDS 1352198 1352728 . + 0 ID=cds-WP_221069462.1;Parent=gene-VA249_RS06600;Dbxref=Genbank:WP_221069462.1;Name=WP_221069462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001108810.1;locus_tag=VA249_RS06600;product=exonuclease domain-containing protein;protein_id=WP_221069462.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1353247 1353543 . + . ID=gene-VA249_RS06605;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=VA249_RS06605;old_locus_tag=VYA_12010 NZ_AP024165.1 Protein Homology CDS 1353247 1353543 . + 0 ID=cds-WP_128811007.1;Parent=gene-VA249_RS06605;Dbxref=Genbank:WP_128811007.1;Name=WP_128811007.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427969.1;locus_tag=VA249_RS06605;product=integration host factor subunit alpha;protein_id=WP_128811007.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1353657 1354430 . - . ID=gene-VA249_RS06610;Name=VA249_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06610;old_locus_tag=VYA_12020 NZ_AP024165.1 Protein Homology CDS 1353657 1354430 . - 0 ID=cds-WP_221069429.1;Parent=gene-VA249_RS06610;Dbxref=Genbank:WP_221069429.1;Name=WP_221069429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054941.1;locus_tag=VA249_RS06610;product=RelA/SpoT domain-containing protein;protein_id=WP_221069429.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1354768 1355418 . + . ID=gene-VA249_RS06615;Name=VA249_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06615;old_locus_tag=VYA_12030 NZ_AP024165.1 Protein Homology CDS 1354768 1355418 . + 0 ID=cds-WP_221069464.1;Parent=gene-VA249_RS06615;Dbxref=Genbank:WP_221069464.1;Name=WP_221069464.1;Ontology_term=GO:0010038,GO:0008119;gbkey=CDS;go_function=thiopurine S-methyltransferase activity|0008119||IEA;go_process=response to metal ion|0010038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533410.1;locus_tag=VA249_RS06615;product=thiopurine S-methyltransferase;protein_id=WP_221069464.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1355557 1356732 . - . ID=gene-VA249_RS06620;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=VA249_RS06620;old_locus_tag=VYA_12040 NZ_AP024165.1 Protein Homology CDS 1355557 1356732 . - 0 ID=cds-WP_221069467.1;Parent=gene-VA249_RS06620;Dbxref=Genbank:WP_221069467.1;Name=WP_221069467.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741806.1;locus_tag=VA249_RS06620;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_221069467.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1356880 1357767 . - . ID=gene-VA249_RS06625;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=VA249_RS06625;old_locus_tag=VYA_12050 NZ_AP024165.1 Protein Homology CDS 1356880 1357767 . - 0 ID=cds-WP_221069469.1;Parent=gene-VA249_RS06625;Dbxref=Genbank:WP_221069469.1;Name=WP_221069469.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245910.1;locus_tag=VA249_RS06625;product=cytidine deaminase;protein_id=WP_221069469.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1358142 1358819 . - . ID=gene-VA249_RS06630;Name=VA249_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06630;old_locus_tag=VYA_12060 NZ_AP024165.1 Protein Homology CDS 1358142 1358819 . - 0 ID=cds-WP_211919319.1;Parent=gene-VA249_RS06630;Dbxref=Genbank:WP_211919319.1;Name=WP_211919319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005495502.1;locus_tag=VA249_RS06630;product=LrgB family protein;protein_id=WP_211919319.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1358821 1359195 . - . ID=gene-VA249_RS06635;Name=VA249_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06635;old_locus_tag=VYA_12070 NZ_AP024165.1 Protein Homology CDS 1358821 1359195 . - 0 ID=cds-WP_221069471.1;Parent=gene-VA249_RS06635;Dbxref=Genbank:WP_221069471.1;Name=WP_221069471.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127845.1;locus_tag=VA249_RS06635;product=CidA/LrgA family protein;protein_id=WP_221069471.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1359254 1360675 . - . ID=gene-VA249_RS06640;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=VA249_RS06640;old_locus_tag=VYA_12080 NZ_AP024165.1 Protein Homology CDS 1359254 1360675 . - 0 ID=cds-WP_221069473.1;Parent=gene-VA249_RS06640;Dbxref=Genbank:WP_221069473.1;Name=WP_221069473.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017057446.1;locus_tag=VA249_RS06640;product=exodeoxyribonuclease I;protein_id=WP_221069473.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1360873 1361568 . - . ID=gene-VA249_RS06645;Name=VA249_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06645;old_locus_tag=VYA_12090 NZ_AP024165.1 Protein Homology CDS 1360873 1361568 . - 0 ID=cds-WP_221069475.1;Parent=gene-VA249_RS06645;Dbxref=Genbank:WP_221069475.1;Name=WP_221069475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197793.1;locus_tag=VA249_RS06645;product=NAD(P)H-binding protein;protein_id=WP_221069475.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1362683 1363729 . + . ID=gene-VA249_RS06650;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=VA249_RS06650;old_locus_tag=VYA_12100 NZ_AP024165.1 Protein Homology CDS 1362683 1363729 . + 0 ID=cds-WP_221069385.1;Parent=gene-VA249_RS06650;Dbxref=Genbank:WP_221069385.1;Name=WP_221069385.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016786190.1;locus_tag=VA249_RS06650;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_221069385.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1363729 1364532 . + . ID=gene-VA249_RS06655;Name=VA249_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06655;old_locus_tag=VYA_12110 NZ_AP024165.1 Protein Homology CDS 1363729 1364532 . + 0 ID=cds-WP_221069383.1;Parent=gene-VA249_RS06655;Dbxref=Genbank:WP_221069383.1;Name=WP_221069383.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397780.1;locus_tag=VA249_RS06655;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_221069383.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1364529 1365062 . + . ID=gene-VA249_RS06660;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=VA249_RS06660;old_locus_tag=VYA_12120 NZ_AP024165.1 Protein Homology CDS 1364529 1365062 . + 0 ID=cds-WP_221069477.1;Parent=gene-VA249_RS06660;Dbxref=Genbank:WP_221069477.1;Name=WP_221069477.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333107.1;locus_tag=VA249_RS06660;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_221069477.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1365074 1365685 . + . ID=gene-VA249_RS06665;Name=VA249_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06665;old_locus_tag=VYA_12130 NZ_AP024165.1 Protein Homology CDS 1365074 1365685 . + 0 ID=cds-WP_128810996.1;Parent=gene-VA249_RS06665;Dbxref=Genbank:WP_128810996.1;Name=WP_128810996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454997.1;locus_tag=VA249_RS06665;product=histidine phosphatase family protein;protein_id=WP_128810996.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1365773 1367572 . + . ID=gene-VA249_RS06670;Name=VA249_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06670;old_locus_tag=VYA_12140 NZ_AP024165.1 Protein Homology CDS 1365773 1367572 . + 0 ID=cds-WP_221069478.1;Parent=gene-VA249_RS06670;Dbxref=Genbank:WP_221069478.1;Name=WP_221069478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818010.1;locus_tag=VA249_RS06670;product=M3 family oligoendopeptidase;protein_id=WP_221069478.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1367822 1368850 . + . ID=gene-VA249_RS06675;Name=VA249_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06675;old_locus_tag=VYA_12150 NZ_AP024165.1 Protein Homology CDS 1367822 1368850 . + 0 ID=cds-WP_221069489.1;Parent=gene-VA249_RS06675;Dbxref=Genbank:WP_221069489.1;Name=WP_221069489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150118.1;locus_tag=VA249_RS06675;product=succinylglutamate desuccinylase;protein_id=WP_221069489.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1368951 1369946 . + . ID=gene-VA249_RS06680;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=VA249_RS06680;old_locus_tag=VYA_12160 NZ_AP024165.1 Protein Homology CDS 1368951 1369946 . + 0 ID=cds-WP_221069491.1;Parent=gene-VA249_RS06680;Dbxref=Genbank:WP_221069491.1;Name=WP_221069491.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820883.1;locus_tag=VA249_RS06680;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_221069491.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1369933 1370700 . + . ID=gene-VA249_RS06685;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=VA249_RS06685;old_locus_tag=VYA_12170 NZ_AP024165.1 Protein Homology CDS 1369933 1370700 . + 0 ID=cds-WP_221069494.1;Parent=gene-VA249_RS06685;Dbxref=Genbank:WP_221069494.1;Name=WP_221069494.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197785.1;locus_tag=VA249_RS06685;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_221069494.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1370729 1371451 . - . ID=gene-VA249_RS06690;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=VA249_RS06690;old_locus_tag=VYA_12180 NZ_AP024165.1 Protein Homology CDS 1370729 1371451 . - 0 ID=cds-WP_221069371.1;Parent=gene-VA249_RS06690;Dbxref=Genbank:WP_221069371.1;Name=WP_221069371.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633991.1;locus_tag=VA249_RS06690;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_221069371.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1371668 1372609 . - . ID=gene-VA249_RS06695;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=VA249_RS06695;old_locus_tag=VYA_12190 NZ_AP024165.1 Protein Homology CDS 1371668 1372609 . - 0 ID=cds-WP_221069369.1;Parent=gene-VA249_RS06695;Dbxref=Genbank:WP_221069369.1;Name=WP_221069369.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004413895.1;locus_tag=VA249_RS06695;product=homoserine O-succinyltransferase;protein_id=WP_221069369.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1373014 1373361 . + . ID=gene-VA249_RS06700;Name=VA249_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06700;old_locus_tag=VYA_12200 NZ_AP024165.1 Protein Homology CDS 1373014 1373361 . + 0 ID=cds-WP_221069497.1;Parent=gene-VA249_RS06700;Dbxref=Genbank:WP_221069497.1;Name=WP_221069497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451865.1;locus_tag=VA249_RS06700;product=hypothetical protein;protein_id=WP_221069497.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1373556 1373888 . + . ID=gene-VA249_RS06705;Name=VA249_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06705;old_locus_tag=VYA_12210 NZ_AP024165.1 Protein Homology CDS 1373556 1373888 . + 0 ID=cds-WP_221069846.1;Parent=gene-VA249_RS06705;Dbxref=Genbank:WP_221069846.1;Name=WP_221069846.1;Ontology_term=GO:0022857,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930487.1;locus_tag=VA249_RS06705;product=SMR family transporter;protein_id=WP_221069846.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1374002 1375429 . - . ID=gene-VA249_RS06710;Name=VA249_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06710;old_locus_tag=VYA_12220 NZ_AP024165.1 Protein Homology CDS 1374002 1375429 . - 0 ID=cds-WP_221069499.1;Parent=gene-VA249_RS06710;Dbxref=Genbank:WP_221069499.1;Name=WP_221069499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451870.1;locus_tag=VA249_RS06710;product=amino acid permease;protein_id=WP_221069499.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1375761 1376390 . - . ID=gene-VA249_RS06715;Name=VA249_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06715;old_locus_tag=VYA_12230 NZ_AP024165.1 Protein Homology CDS 1375761 1376390 . - 0 ID=cds-WP_221069501.1;Parent=gene-VA249_RS06715;Dbxref=Genbank:WP_221069501.1;Name=WP_221069501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385294.1;locus_tag=VA249_RS06715;product=LysE family translocator;protein_id=WP_221069501.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1376778 1377725 . + . ID=gene-VA249_RS06720;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=VA249_RS06720;old_locus_tag=VYA_12240 NZ_AP024165.1 Protein Homology CDS 1376778 1377725 . + 0 ID=cds-WP_221069503.1;Parent=gene-VA249_RS06720;Dbxref=Genbank:WP_221069503.1;Name=WP_221069503.1;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxL;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451876.1;locus_tag=VA249_RS06720;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=WP_221069503.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1377796 1379271 . - . ID=gene-VA249_RS06725;Name=VA249_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06725;old_locus_tag=VYA_12250 NZ_AP024165.1 Protein Homology CDS 1377796 1379271 . - 0 ID=cds-WP_221069505.1;Parent=gene-VA249_RS06725;Dbxref=Genbank:WP_221069505.1;Name=WP_221069505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433690.1;locus_tag=VA249_RS06725;product=carboxypeptidase M32;protein_id=WP_221069505.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1379531 1380163 . + . ID=gene-VA249_RS06730;Name=VA249_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06730;old_locus_tag=VYA_12260 NZ_AP024165.1 Protein Homology CDS 1379531 1380163 . + 0 ID=cds-WP_221069848.1;Parent=gene-VA249_RS06730;Dbxref=Genbank:WP_221069848.1;Name=WP_221069848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696973.1;locus_tag=VA249_RS06730;product=LysE family translocator;protein_id=WP_221069848.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1380335 1381711 . - . ID=gene-VA249_RS06735;Name=VA249_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06735;old_locus_tag=VYA_12270 NZ_AP024165.1 Protein Homology CDS 1380335 1381711 . - 0 ID=cds-WP_221069507.1;Parent=gene-VA249_RS06735;Dbxref=Genbank:WP_221069507.1;Name=WP_221069507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017422121.1;locus_tag=VA249_RS06735;product=sodium:alanine symporter family protein;protein_id=WP_221069507.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 1381834 1381935 . - . ID=id-NZ_AP024165.1:1381834..1381935;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 1382466 1382624 . + . ID=gene-VA249_RS06740;Name=VA249_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06740;old_locus_tag=VYA_12280 NZ_AP024165.1 Protein Homology CDS 1382466 1382624 . + 0 ID=cds-WP_128810983.1;Parent=gene-VA249_RS06740;Dbxref=Genbank:WP_128810983.1;Name=WP_128810983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841472.1;locus_tag=VA249_RS06740;product=hypothetical protein;protein_id=WP_128810983.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1382657 1383391 . + . ID=gene-VA249_RS06745;Name=VA249_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06745;old_locus_tag=VYA_12290 NZ_AP024165.1 Protein Homology CDS 1382657 1383391 . + 0 ID=cds-WP_221069508.1;Parent=gene-VA249_RS06745;Dbxref=Genbank:WP_221069508.1;Name=WP_221069508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443528.1;locus_tag=VA249_RS06745;product=chromosome partitioning protein ParA;protein_id=WP_221069508.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1383573 1383956 . - . ID=gene-VA249_RS06750;Name=VA249_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06750;old_locus_tag=VYA_12300 NZ_AP024165.1 Protein Homology CDS 1383573 1383956 . - 0 ID=cds-WP_221069510.1;Parent=gene-VA249_RS06750;Dbxref=Genbank:WP_221069510.1;Name=WP_221069510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841882.1;locus_tag=VA249_RS06750;product=hypothetical protein;protein_id=WP_221069510.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1384148 1384723 . - . ID=gene-VA249_RS06755;Name=VA249_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06755;old_locus_tag=VYA_12310 NZ_AP024165.1 Protein Homology CDS 1384148 1384723 . - 0 ID=cds-WP_211919257.1;Parent=gene-VA249_RS06755;Dbxref=Genbank:WP_211919257.1;Name=WP_211919257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528219.1;locus_tag=VA249_RS06755;product=nucleoside triphosphate pyrophosphohydrolase family protein;protein_id=WP_211919257.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1384911 1385492 . - . ID=gene-VA249_RS06760;Name=VA249_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06760;old_locus_tag=VYA_12320 NZ_AP024165.1 Protein Homology CDS 1384911 1385492 . - 0 ID=cds-WP_221069352.1;Parent=gene-VA249_RS06760;Dbxref=Genbank:WP_221069352.1;Name=WP_221069352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705910.1;locus_tag=VA249_RS06760;product=DUF1415 family protein;protein_id=WP_221069352.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1385552 1386775 . - . ID=gene-VA249_RS06765;Name=VA249_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06765;old_locus_tag=VYA_12330 NZ_AP024165.1 Protein Homology CDS 1385552 1386775 . - 0 ID=cds-WP_221069512.1;Parent=gene-VA249_RS06765;Dbxref=Genbank:WP_221069512.1;Name=WP_221069512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427949.1;locus_tag=VA249_RS06765;product=MFS transporter;protein_id=WP_221069512.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1386882 1387751 . + . ID=gene-VA249_RS06770;Name=VA249_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06770;old_locus_tag=VYA_12340 NZ_AP024165.1 Protein Homology CDS 1386882 1387751 . + 0 ID=cds-WP_221069348.1;Parent=gene-VA249_RS06770;Dbxref=Genbank:WP_221069348.1;Name=WP_221069348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705912.1;locus_tag=VA249_RS06770;product=LysR family transcriptional regulator;protein_id=WP_221069348.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1387864 1388094 . - . ID=gene-VA249_RS06775;Name=VA249_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06775;old_locus_tag=VYA_12350 NZ_AP024165.1 Protein Homology CDS 1387864 1388094 . - 0 ID=cds-WP_211919249.1;Parent=gene-VA249_RS06775;Dbxref=Genbank:WP_211919249.1;Name=WP_211919249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454961.1;locus_tag=VA249_RS06775;product=glutaredoxin family protein;protein_id=WP_211919249.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1388233 1388748 . + . ID=gene-VA249_RS06780;Name=VA249_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06780;old_locus_tag=VYA_12360 NZ_AP024165.1 Protein Homology CDS 1388233 1388748 . + 0 ID=cds-WP_221069346.1;Parent=gene-VA249_RS06780;Dbxref=Genbank:WP_221069346.1;Name=WP_221069346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697392.1;locus_tag=VA249_RS06780;product=M48 family metallopeptidase;protein_id=WP_221069346.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1388735 1389862 . + . ID=gene-VA249_RS06785;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=VA249_RS06785;old_locus_tag=VYA_12370 NZ_AP024165.1 Protein Homology CDS 1388735 1389862 . + 0 ID=cds-WP_221069515.1;Parent=gene-VA249_RS06785;Dbxref=Genbank:WP_221069515.1;Name=WP_221069515.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528225.1;locus_tag=VA249_RS06785;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_221069515.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1390030 1393563 . + . ID=gene-VA249_RS06790;Name=VA249_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06790;old_locus_tag=VYA_12380 NZ_AP024165.1 Protein Homology CDS 1390030 1393563 . + 0 ID=cds-WP_221069517.1;Parent=gene-VA249_RS06790;Dbxref=Genbank:WP_221069517.1;Name=WP_221069517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=VA249_RS06790;product=ATP-binding protein;protein_id=WP_221069517.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1393799 1394950 . + . ID=gene-VA249_RS06795;Name=VA249_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06795;old_locus_tag=VYA_12390 NZ_AP024165.1 Protein Homology CDS 1393799 1394950 . + 0 ID=cds-WP_221069340.1;Parent=gene-VA249_RS06795;Dbxref=Genbank:WP_221069340.1;Name=WP_221069340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427872.1;locus_tag=VA249_RS06795;product=GGDEF domain-containing protein;protein_id=WP_221069340.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1395017 1395811 . - . ID=gene-VA249_RS06800;Name=VA249_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06800;old_locus_tag=VYA_12400 NZ_AP024165.1 Protein Homology CDS 1395017 1395811 . - 0 ID=cds-WP_221069519.1;Parent=gene-VA249_RS06800;Dbxref=Genbank:WP_221069519.1;Name=WP_221069519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633951.1;locus_tag=VA249_RS06800;product=transcriptional regulator;protein_id=WP_221069519.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1395835 1396509 . - . ID=gene-VA249_RS06805;Name=VA249_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06805;old_locus_tag=VYA_12410 NZ_AP024165.1 Protein Homology CDS 1395835 1396509 . - 0 ID=cds-WP_221069336.1;Parent=gene-VA249_RS06805;Dbxref=Genbank:WP_221069336.1;Name=WP_221069336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004412418.1;locus_tag=VA249_RS06805;product=GntR family transcriptional regulator;protein_id=WP_221069336.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1396651 1398195 . - . ID=gene-VA249_RS06810;Name=VA249_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06810;old_locus_tag=VYA_12420 NZ_AP024165.1 Protein Homology CDS 1396651 1398195 . - 0 ID=cds-WP_221069521.1;Parent=gene-VA249_RS06810;Dbxref=Genbank:WP_221069521.1;Name=WP_221069521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445507.1;locus_tag=VA249_RS06810;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_221069521.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1398214 1399215 . - . ID=gene-VA249_RS06815;Name=VA249_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06815;old_locus_tag=VYA_12430 NZ_AP024165.1 Protein Homology CDS 1398214 1399215 . - 0 ID=cds-WP_221069523.1;Parent=gene-VA249_RS06815;Dbxref=Genbank:WP_221069523.1;Name=WP_221069523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017066920.1;locus_tag=VA249_RS06815;product=4-hydroxyproline epimerase;protein_id=WP_221069523.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1399326 1400582 . + . ID=gene-VA249_RS06820;Name=VA249_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06820;old_locus_tag=VYA_12440 NZ_AP024165.1 Protein Homology CDS 1399326 1400582 . + 0 ID=cds-WP_221069525.1;Parent=gene-VA249_RS06820;Dbxref=Genbank:WP_221069525.1;Name=WP_221069525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697398.1;locus_tag=VA249_RS06820;product=FAD-binding oxidoreductase;protein_id=WP_221069525.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1400705 1401778 . + . ID=gene-VA249_RS06825;Name=VA249_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06825;old_locus_tag=VYA_12450 NZ_AP024165.1 Protein Homology CDS 1400705 1401778 . + 0 ID=cds-WP_221069526.1;Parent=gene-VA249_RS06825;Dbxref=Genbank:WP_221069526.1;Name=WP_221069526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448609.1;locus_tag=VA249_RS06825;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_221069526.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1401872 1402846 . + . ID=gene-VA249_RS06830;Name=VA249_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06830;old_locus_tag=VYA_12460 NZ_AP024165.1 Protein Homology CDS 1401872 1402846 . + 0 ID=cds-WP_221069529.1;Parent=gene-VA249_RS06830;Dbxref=Genbank:WP_221069529.1;Name=WP_221069529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841896.1;locus_tag=VA249_RS06830;product=ornithine cyclodeaminase family protein;protein_id=WP_221069529.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1402903 1403817 . + . ID=gene-VA249_RS06835;Name=VA249_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06835;old_locus_tag=VYA_12470 NZ_AP024165.1 Protein Homology CDS 1402903 1403817 . + 0 ID=cds-WP_221069324.1;Parent=gene-VA249_RS06835;Dbxref=Genbank:WP_221069324.1;Name=WP_221069324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439913.1;locus_tag=VA249_RS06835;product=dihydrodipicolinate synthase family protein;protein_id=WP_221069324.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1403891 1405012 . + . ID=gene-VA249_RS06840;Name=VA249_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06840;old_locus_tag=VYA_12480 NZ_AP024165.1 Protein Homology CDS 1403891 1405012 . + 0 ID=cds-WP_221069532.1;Parent=gene-VA249_RS06840;Dbxref=Genbank:WP_221069532.1;Name=WP_221069532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741631.1;locus_tag=VA249_RS06840;product=ABC transporter ATP-binding protein;protein_id=WP_221069532.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1405009 1406289 . + . ID=gene-VA249_RS06845;Name=VA249_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06845;old_locus_tag=VYA_12490 NZ_AP024165.1 Protein Homology CDS 1405009 1406289 . + 0 ID=cds-WP_221069534.1;Parent=gene-VA249_RS06845;Dbxref=Genbank:WP_221069534.1;Name=WP_221069534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448606.1;locus_tag=VA249_RS06845;product=ABC transporter permease;protein_id=WP_221069534.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1406292 1407140 . + . ID=gene-VA249_RS06850;Name=VA249_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06850;old_locus_tag=VYA_12500 NZ_AP024165.1 Protein Homology CDS 1406292 1407140 . + 0 ID=cds-WP_211919202.1;Parent=gene-VA249_RS06850;Dbxref=Genbank:WP_211919202.1;Name=WP_211919202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445496.1;locus_tag=VA249_RS06850;product=ABC transporter permease;protein_id=WP_211919202.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1407226 1407663 . - . ID=gene-VA249_RS06855;Name=VA249_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06855;old_locus_tag=VYA_12510 NZ_AP024165.1 Protein Homology CDS 1407226 1407663 . - 0 ID=cds-WP_221069536.1;Parent=gene-VA249_RS06855;Dbxref=Genbank:WP_221069536.1;Name=WP_221069536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454989.1;locus_tag=VA249_RS06855;product=hypothetical protein;protein_id=WP_221069536.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1407868 1409199 . - . ID=gene-VA249_RS06860;Name=VA249_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06860;old_locus_tag=VYA_12520 NZ_AP024165.1 Protein Homology CDS 1407868 1409199 . - 0 ID=cds-WP_221069538.1;Parent=gene-VA249_RS06860;Dbxref=Genbank:WP_221069538.1;Name=WP_221069538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004731960.1;locus_tag=VA249_RS06860;product=MFS transporter;protein_id=WP_221069538.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1409438 1409728 . + . ID=gene-VA249_RS06865;Name=VA249_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06865;old_locus_tag=VYA_12530 NZ_AP024165.1 Protein Homology CDS 1409438 1409728 . + 0 ID=cds-WP_221069311.1;Parent=gene-VA249_RS06865;Dbxref=Genbank:WP_221069311.1;Name=WP_221069311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017036751.1;locus_tag=VA249_RS06865;product=YkgJ family cysteine cluster protein;protein_id=WP_221069311.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1409967 1411157 . - . ID=gene-VA249_RS06870;Name=VA249_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06870;old_locus_tag=VYA_12540 NZ_AP024165.1 Protein Homology CDS 1409967 1411157 . - 0 ID=cds-WP_221069540.1;Parent=gene-VA249_RS06870;Dbxref=Genbank:WP_221069540.1;Name=WP_221069540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714388.1;locus_tag=VA249_RS06870;product=multidrug effflux MFS transporter;protein_id=WP_221069540.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1411369 1412031 . + . ID=gene-VA249_RS06875;Name=VA249_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06875;old_locus_tag=VYA_12550 NZ_AP024165.1 Protein Homology CDS 1411369 1412031 . + 0 ID=cds-WP_221069542.1;Parent=gene-VA249_RS06875;Dbxref=Genbank:WP_221069542.1;Name=WP_221069542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008079392.1;locus_tag=VA249_RS06875;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_221069542.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1412378 1412737 . + . ID=gene-VA249_RS06880;Name=VA249_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06880;old_locus_tag=VYA_12560 NZ_AP024165.1 Protein Homology CDS 1412378 1412737 . + 0 ID=cds-WP_128810956.1;Parent=gene-VA249_RS06880;Dbxref=Genbank:WP_128810956.1;Name=WP_128810956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017072037.1;locus_tag=VA249_RS06880;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_128810956.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1412737 1413252 . + . ID=gene-VA249_RS06885;Name=VA249_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06885;old_locus_tag=VYA_12570 NZ_AP024165.1 Protein Homology CDS 1412737 1413252 . + 0 ID=cds-WP_221069544.1;Parent=gene-VA249_RS06885;Dbxref=Genbank:WP_221069544.1;Name=WP_221069544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017072038.1;locus_tag=VA249_RS06885;product=VOC family protein;protein_id=WP_221069544.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1413249 1413689 . + . ID=gene-VA249_RS06890;Name=VA249_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06890;old_locus_tag=VYA_12580 NZ_AP024165.1 Protein Homology CDS 1413249 1413689 . + 0 ID=cds-WP_128810955.1;Parent=gene-VA249_RS06890;Dbxref=Genbank:WP_128810955.1;Name=WP_128810955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197630.1;locus_tag=VA249_RS06890;product=DMT family transporter;protein_id=WP_128810955.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1413689 1414204 . + . ID=gene-VA249_RS06895;Name=VA249_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06895;old_locus_tag=VYA_12590 NZ_AP024165.1 Protein Homology CDS 1413689 1414204 . + 0 ID=cds-WP_128810954.1;Parent=gene-VA249_RS06895;Dbxref=Genbank:WP_128810954.1;Name=WP_128810954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017028220.1;locus_tag=VA249_RS06895;product=DMT family transporter;protein_id=WP_128810954.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1414194 1414517 . + . ID=gene-VA249_RS06900;Name=VA249_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06900;old_locus_tag=VYA_12600 NZ_AP024165.1 Protein Homology CDS 1414194 1414517 . + 0 ID=cds-WP_221069547.1;Parent=gene-VA249_RS06900;Dbxref=Genbank:WP_221069547.1;Name=WP_221069547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017028219.1;locus_tag=VA249_RS06900;product=hypothetical protein;protein_id=WP_221069547.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1414629 1415567 . + . ID=gene-VA249_RS06905;Name=VA249_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06905;old_locus_tag=VYA_12610 NZ_AP024165.1 Protein Homology CDS 1414629 1415567 . + 0 ID=cds-WP_221069549.1;Parent=gene-VA249_RS06905;Dbxref=Genbank:WP_221069549.1;Name=WP_221069549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017028218.1;locus_tag=VA249_RS06905;product=LysR family transcriptional regulator;protein_id=WP_221069549.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1415587 1416105 . - . ID=gene-VA249_RS06910;Name=VA249_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06910;old_locus_tag=VYA_12620 NZ_AP024165.1 Protein Homology CDS 1415587 1416105 . - 0 ID=cds-WP_128810952.1;Parent=gene-VA249_RS06910;Dbxref=Genbank:WP_128810952.1;Name=WP_128810952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006881388.1;locus_tag=VA249_RS06910;product=lactoylglutathione lyase family protein;protein_id=WP_128810952.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1416331 1416486 . - . ID=gene-VA249_RS24090;Name=VA249_RS24090;end_range=1416486,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24090;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1416331 1416486 . - 0 ID=cds-VA249_RS24090;Parent=gene-VA249_RS24090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1416486,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450193.1;locus_tag=VA249_RS24090;partial=true;product=MFS sugar transporter;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1416528 1417469 . + . ID=gene-VA249_RS06915;Name=VA249_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06915;old_locus_tag=VYA_12640 NZ_AP024165.1 Protein Homology CDS 1416528 1417469 . + 0 ID=cds-WP_221069550.1;Parent=gene-VA249_RS06915;Dbxref=Genbank:WP_221069550.1;Name=WP_221069550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017790831.1;locus_tag=VA249_RS06915;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_221069550.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1417918 1418982 . + . ID=gene-VA249_RS06920;Name=VA249_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06920;old_locus_tag=VYA_12650 NZ_AP024165.1 Protein Homology CDS 1417918 1418982 . + 0 ID=cds-WP_221069553.1;Parent=gene-VA249_RS06920;Dbxref=Genbank:WP_221069553.1;Name=WP_221069553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728363.1;locus_tag=VA249_RS06920;product=HlyD family secretion protein;protein_id=WP_221069553.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1418992 1419993 . + . ID=gene-VA249_RS06925;Name=VA249_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06925;old_locus_tag=VYA_12660 NZ_AP024165.1 Protein Homology CDS 1418992 1419993 . + 0 ID=cds-WP_221069555.1;Parent=gene-VA249_RS06925;Dbxref=Genbank:WP_221069555.1;Name=WP_221069555.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022616.2;locus_tag=VA249_RS06925;product=DUF2955 domain-containing protein;protein_id=WP_221069555.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1420047 1421192 . + . ID=gene-VA249_RS06930;Name=VA249_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06930;old_locus_tag=VYA_12680 NZ_AP024165.1 Protein Homology CDS 1420047 1421192 . + 0 ID=cds-WP_225927109.1;Parent=gene-VA249_RS06930;Dbxref=Genbank:WP_225927109.1;Name=WP_225927109.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075442.1;locus_tag=VA249_RS06930;product=patatin-like phospholipase family protein;protein_id=WP_225927109.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1421496 1423292 . - . ID=gene-VA249_RS06935;Name=VA249_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06935;old_locus_tag=VYA_12690 NZ_AP024165.1 Protein Homology CDS 1421496 1423292 . - 0 ID=cds-WP_221069557.1;Parent=gene-VA249_RS06935;Dbxref=Genbank:WP_221069557.1;Name=WP_221069557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697420.1;locus_tag=VA249_RS06935;product=M24B family metallopeptidase;protein_id=WP_221069557.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1423289 1423483 . - . ID=gene-VA249_RS24095;Name=VA249_RS24095;end_range=1423483,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24095;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1423289 1423483 . - 0 ID=cds-VA249_RS24095;Parent=gene-VA249_RS24095;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1423483,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445481.1;locus_tag=VA249_RS24095;partial=true;product=oligopeptide ABC transporter ATP-binding protein OppF;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1423642 1423809 . - . ID=gene-VA249_RS06940;Name=VA249_RS06940;end_range=1423809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS06940;old_locus_tag=VYA_12700;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1423642 1423809 . - 0 ID=cds-VA249_RS06940;Parent=gene-VA249_RS06940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1423809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705957.1;locus_tag=VA249_RS06940;partial=true;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1424079 1425185 . - . ID=gene-VA249_RS06945;Name=VA249_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06945;old_locus_tag=VYA_12710 NZ_AP024165.1 Protein Homology CDS 1424079 1425185 . - 0 ID=cds-WP_221069559.1;Parent=gene-VA249_RS06945;Dbxref=Genbank:WP_221069559.1;Name=WP_221069559.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448599.1;locus_tag=VA249_RS06945;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_221069559.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1425676 1427106 . + . ID=gene-VA249_RS06950;Name=VA249_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06950;old_locus_tag=VYA_12720 NZ_AP024165.1 GeneMarkS-2+ CDS 1425676 1427106 . + 0 ID=cds-WP_221069561.1;Parent=gene-VA249_RS06950;Dbxref=Genbank:WP_221069561.1;Name=WP_221069561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06950;product=hypothetical protein;protein_id=WP_221069561.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1427623 1429359 . + . ID=gene-VA249_RS06955;Name=VA249_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06955;old_locus_tag=VYA_12740 NZ_AP024165.1 Protein Homology CDS 1427623 1429359 . + 0 ID=cds-WP_221069563.1;Parent=gene-VA249_RS06955;Dbxref=Genbank:WP_221069563.1;Name=WP_221069563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075040.1;locus_tag=VA249_RS06955;product=amidohydrolase;protein_id=WP_221069563.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1429481 1430917 . + . ID=gene-VA249_RS06960;Name=VA249_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06960;old_locus_tag=VYA_12750 NZ_AP024165.1 Protein Homology CDS 1429481 1430917 . + 0 ID=cds-WP_221067583.1-4;Parent=gene-VA249_RS06960;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS06960;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1431471 1433114 . - . ID=gene-VA249_RS06965;Name=VA249_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06965 NZ_AP024165.1 Protein Homology CDS 1431471 1433114 . - 0 ID=cds-WP_221069565.1;Parent=gene-VA249_RS06965;Dbxref=Genbank:WP_221069565.1;Name=WP_221069565.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017791673.1;locus_tag=VA249_RS06965;product=MFS transporter;protein_id=WP_221069565.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1433192 1434811 . - . ID=gene-VA249_RS06970;Name=VA249_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06970;old_locus_tag=VYA_12770 NZ_AP024165.1 Protein Homology CDS 1433192 1434811 . - 0 ID=cds-WP_221069567.1;Parent=gene-VA249_RS06970;Dbxref=Genbank:WP_221069567.1;Name=WP_221069567.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017034573.1;locus_tag=VA249_RS06970;product=MFS transporter;protein_id=WP_221069567.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1434980 1435462 . - . ID=gene-VA249_RS06975;Name=VA249_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06975;old_locus_tag=VYA_12780 NZ_AP024165.1 Protein Homology CDS 1434980 1435462 . - 0 ID=cds-WP_221069569.1;Parent=gene-VA249_RS06975;Dbxref=Genbank:WP_221069569.1;Name=WP_221069569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075037.1;locus_tag=VA249_RS06975;product=hypothetical protein;protein_id=WP_221069569.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1435441 1436139 . - . ID=gene-VA249_RS06980;Name=VA249_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06980;old_locus_tag=VYA_12790 NZ_AP024165.1 Protein Homology CDS 1435441 1436139 . - 0 ID=cds-WP_221069570.1;Parent=gene-VA249_RS06980;Dbxref=Genbank:WP_221069570.1;Name=WP_221069570.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017788966.1;locus_tag=VA249_RS06980;product=winged helix-turn-helix domain-containing protein;protein_id=WP_221069570.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1436543 1437361 . + . ID=gene-VA249_RS06985;Name=VA249_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06985;old_locus_tag=VYA_12800 NZ_AP024165.1 Protein Homology CDS 1436543 1437361 . + 0 ID=cds-WP_221069572.1;Parent=gene-VA249_RS06985;Dbxref=Genbank:WP_221069572.1;Name=WP_221069572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075035.1;locus_tag=VA249_RS06985;product=hypothetical protein;protein_id=WP_221069572.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1437447 1437737 . - . ID=gene-VA249_RS06990;Name=VA249_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS06990;old_locus_tag=VYA_12810 NZ_AP024165.1 GeneMarkS-2+ CDS 1437447 1437737 . - 0 ID=cds-WP_221069573.1;Parent=gene-VA249_RS06990;Dbxref=Genbank:WP_221069573.1;Name=WP_221069573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS06990;product=hypothetical protein;protein_id=WP_221069573.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1437781 1438854 . + . ID=gene-VA249_RS06995;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=VA249_RS06995;old_locus_tag=VYA_12820 NZ_AP024165.1 Protein Homology CDS 1437781 1438854 . + 0 ID=cds-WP_221069575.1;Parent=gene-VA249_RS06995;Dbxref=Genbank:WP_221069575.1;Name=WP_221069575.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017630977.1;locus_tag=VA249_RS06995;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_221069575.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1438847 1439977 . + . ID=gene-VA249_RS07000;Name=VA249_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07000;old_locus_tag=VYA_12830 NZ_AP024165.1 Protein Homology CDS 1438847 1439977 . + 0 ID=cds-WP_221069577.1;Parent=gene-VA249_RS07000;Dbxref=Genbank:WP_221069577.1;Name=WP_221069577.1;Ontology_term=GO:0006559,GO:0006570,GO:0004411;gbkey=CDS;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine metabolic process|0006570||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009701555.1;locus_tag=VA249_RS07000;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_221069577.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1439987 1441024 . + . ID=gene-VA249_RS07005;Name=VA249_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07005;old_locus_tag=VYA_12840 NZ_AP024165.1 Protein Homology CDS 1439987 1441024 . + 0 ID=cds-WP_221069274.1;Parent=gene-VA249_RS07005;Dbxref=Genbank:WP_221069274.1;Name=WP_221069274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820905.1;locus_tag=VA249_RS07005;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_221069274.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1441044 1441712 . + . ID=gene-VA249_RS07010;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=VA249_RS07010;old_locus_tag=VYA_12850 NZ_AP024165.1 Protein Homology CDS 1441044 1441712 . + 0 ID=cds-WP_221069578.1;Parent=gene-VA249_RS07010;Dbxref=Genbank:WP_221069578.1;Name=WP_221069578.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818047.1;locus_tag=VA249_RS07010;product=maleylacetoacetate isomerase;protein_id=WP_221069578.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1441915 1442616 . + . ID=gene-VA249_RS07015;Name=VA249_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07015;old_locus_tag=VYA_12860 NZ_AP024165.1 Protein Homology CDS 1441915 1442616 . + 0 ID=cds-WP_221069580.1;Parent=gene-VA249_RS07015;Dbxref=Genbank:WP_221069580.1;Name=WP_221069580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=VA249_RS07015;product=SDR family oxidoreductase;protein_id=WP_221069580.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1442842 1443504 . + . ID=gene-VA249_RS07020;Name=VA249_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07020;old_locus_tag=VYA_12870 NZ_AP024165.1 Protein Homology CDS 1442842 1443504 . + 0 ID=cds-WP_211919132.1;Parent=gene-VA249_RS07020;Dbxref=Genbank:WP_211919132.1;Name=WP_211919132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197766.1;locus_tag=VA249_RS07020;product=DUF2726 domain-containing protein;protein_id=WP_211919132.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1443694 1444032 . + . ID=gene-VA249_RS07025;Name=VA249_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07025;old_locus_tag=VYA_12880 NZ_AP024165.1 Protein Homology CDS 1443694 1444032 . + 0 ID=cds-WP_211919130.1;Parent=gene-VA249_RS07025;Dbxref=Genbank:WP_211919130.1;Name=WP_211919130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818048.1;locus_tag=VA249_RS07025;product=hypothetical protein;protein_id=WP_211919130.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1444223 1444299 . + . ID=gene-VA249_RS07030;Name=VA249_RS07030;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS07030;old_locus_tag=VYA_t00520 NZ_AP024165.1 tRNAscan-SE tRNA 1444223 1444299 . + . ID=rna-VA249_RS07030;Parent=gene-VA249_RS07030;anticodon=(pos:1444257..1444259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS07030;product=tRNA-Val NZ_AP024165.1 tRNAscan-SE exon 1444223 1444299 . + . ID=exon-VA249_RS07030-1;Parent=rna-VA249_RS07030;anticodon=(pos:1444257..1444259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS07030;product=tRNA-Val NZ_AP024165.1 RefSeq gene 1444329 1444405 . + . ID=gene-VA249_RS07035;Name=VA249_RS07035;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS07035;old_locus_tag=VYA_t00530 NZ_AP024165.1 tRNAscan-SE tRNA 1444329 1444405 . + . ID=rna-VA249_RS07035;Parent=gene-VA249_RS07035;anticodon=(pos:1444363..1444365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS07035;product=tRNA-Val NZ_AP024165.1 tRNAscan-SE exon 1444329 1444405 . + . ID=exon-VA249_RS07035-1;Parent=rna-VA249_RS07035;anticodon=(pos:1444363..1444365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS07035;product=tRNA-Val NZ_AP024165.1 RefSeq gene 1444663 1444794 . - . ID=gene-VA249_RS07040;Name=VA249_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07040 NZ_AP024165.1 Protein Homology CDS 1444663 1444794 . - 0 ID=cds-WP_242598082.1;Parent=gene-VA249_RS07040;Dbxref=Genbank:WP_242598082.1;Name=WP_242598082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024835.2;locus_tag=VA249_RS07040;product=helix-turn-helix domain-containing protein;protein_id=WP_242598082.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1445108 1446220 . + . ID=gene-VA249_RS07045;Name=VA249_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07045;old_locus_tag=VYA_12890 NZ_AP024165.1 Protein Homology CDS 1445108 1446220 . + 0 ID=cds-WP_221069591.1;Parent=gene-VA249_RS07045;Dbxref=Genbank:WP_221069591.1;Name=WP_221069591.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=VA249_RS07045;product=helix-turn-helix transcriptional regulator;protein_id=WP_221069591.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1446354 1446680 . - . ID=gene-VA249_RS07050;Name=VA249_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07050;old_locus_tag=VYA_12900 NZ_AP024165.1 GeneMarkS-2+ CDS 1446354 1446680 . - 0 ID=cds-WP_221069593.1;Parent=gene-VA249_RS07050;Dbxref=Genbank:WP_221069593.1;Name=WP_221069593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS07050;product=hypothetical protein;protein_id=WP_221069593.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1446919 1448313 . + . ID=gene-VA249_RS07055;Name=VA249_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07055;old_locus_tag=VYA_12910 NZ_AP024165.1 Protein Homology CDS 1446919 1448313 . + 0 ID=cds-WP_221069595.1;Parent=gene-VA249_RS07055;Dbxref=Genbank:WP_221069595.1;Name=WP_221069595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=VA249_RS07055;product=sel1 repeat family protein;protein_id=WP_221069595.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1448316 1448572 . - . ID=gene-VA249_RS24100;Name=VA249_RS24100;end_range=1448572,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24100;old_locus_tag=VYA_12920;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 1448316 1448572 . - 0 ID=cds-VA249_RS24100;Parent=gene-VA249_RS24100;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1448572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017014697.1;locus_tag=VA249_RS24100;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1448831 1449688 . - . ID=gene-VA249_RS07070;Name=VA249_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07070;old_locus_tag=VYA_12940 NZ_AP024165.1 GeneMarkS-2+ CDS 1448831 1449688 . - 0 ID=cds-WP_221069599.1;Parent=gene-VA249_RS07070;Dbxref=Genbank:WP_221069599.1;Name=WP_221069599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS07070;product=hypothetical protein;protein_id=WP_221069599.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1450016 1450621 . - . ID=gene-VA249_RS07075;Name=VA249_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07075;old_locus_tag=VYA_12950 NZ_AP024165.1 Protein Homology CDS 1450016 1450621 . - 0 ID=cds-WP_225927121.1;Parent=gene-VA249_RS07075;Dbxref=Genbank:WP_225927121.1;Name=WP_225927121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017028136.1;locus_tag=VA249_RS07075;product=sugar transferase;protein_id=WP_225927121.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1450770 1451897 . - . ID=gene-VA249_RS07080;Name=VA249_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07080;old_locus_tag=VYA_12960 NZ_AP024165.1 Protein Homology CDS 1450770 1451897 . - 0 ID=cds-WP_221069853.1;Parent=gene-VA249_RS07080;Dbxref=Genbank:WP_221069853.1;Name=WP_221069853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010440952.1;locus_tag=VA249_RS07080;product=glycosyltransferase family 2 protein;protein_id=WP_221069853.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1451935 1453029 . - . ID=gene-VA249_RS07085;Name=VA249_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07085;old_locus_tag=VYA_12970 NZ_AP024165.1 Protein Homology CDS 1451935 1453029 . - 0 ID=cds-WP_225927110.1;Parent=gene-VA249_RS07085;Dbxref=Genbank:WP_225927110.1;Name=WP_225927110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017044064.1;locus_tag=VA249_RS07085;product=glycosyltransferase;protein_id=WP_225927110.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1453160 1454614 . - . ID=gene-VA249_RS07090;Name=VA249_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07090;old_locus_tag=VYA_12980 NZ_AP024165.1 Protein Homology CDS 1453160 1454614 . - 0 ID=cds-WP_221069857.1;Parent=gene-VA249_RS07090;Dbxref=Genbank:WP_221069857.1;Name=WP_221069857.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017057309.1;locus_tag=VA249_RS07090;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_221069857.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1454626 1455744 . - . ID=gene-VA249_RS07095;Name=VA249_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07095;old_locus_tag=VYA_12990 NZ_AP024165.1 Protein Homology CDS 1454626 1455744 . - 0 ID=cds-WP_221069602.1;Parent=gene-VA249_RS07095;Dbxref=Genbank:WP_221069602.1;Name=WP_221069602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017073225.1;locus_tag=VA249_RS07095;product=glycosyltransferase;protein_id=WP_221069602.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1455737 1456486 . - . ID=gene-VA249_RS07100;Name=VA249_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07100;old_locus_tag=VYA_13000 NZ_AP024165.1 Protein Homology CDS 1455737 1456486 . - 0 ID=cds-WP_221069604.1;Parent=gene-VA249_RS07100;Dbxref=Genbank:WP_221069604.1;Name=WP_221069604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005473765.1;locus_tag=VA249_RS07100;product=acyltransferase;protein_id=WP_221069604.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1456603 1457936 . - . ID=gene-VA249_RS07105;Name=VA249_RS07105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS07105;old_locus_tag=VYA_13010;pseudo=true NZ_AP024165.1 Protein Homology CDS 1456603 1457936 . - 0 ID=cds-VA249_RS07105;Parent=gene-VA249_RS07105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004417624.1;locus_tag=VA249_RS07105;product=O-antigen ligase family protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1457995 1459452 . - . ID=gene-VA249_RS07110;Name=VA249_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07110;old_locus_tag=VYA_13020 NZ_AP024165.1 Protein Homology CDS 1457995 1459452 . - 0 ID=cds-WP_221069606.1;Parent=gene-VA249_RS07110;Dbxref=Genbank:WP_221069606.1;Name=WP_221069606.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014051.2;locus_tag=VA249_RS07110;product=oligosaccharide flippase family protein;protein_id=WP_221069606.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1459449 1460816 . - . ID=gene-VA249_RS07115;Name=VA249_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07115;old_locus_tag=VYA_13030 NZ_AP024165.1 Protein Homology CDS 1459449 1460816 . - 0 ID=cds-WP_221069616.1;Parent=gene-VA249_RS07115;Dbxref=Genbank:WP_221069616.1;Name=WP_221069616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=VA249_RS07115;product=glycosyltransferase family 4 protein;protein_id=WP_221069616.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1460813 1462111 . - . ID=gene-VA249_RS07120;Name=VA249_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07120;old_locus_tag=VYA_13040 NZ_AP024165.1 Protein Homology CDS 1460813 1462111 . - 0 ID=cds-WP_221069618.1;Parent=gene-VA249_RS07120;Dbxref=Genbank:WP_221069618.1;Name=WP_221069618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017051595.1;locus_tag=VA249_RS07120;product=glycosyltransferase;protein_id=WP_221069618.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1462305 1463564 . - . ID=gene-VA249_RS07125;Name=VA249_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07125 NZ_AP024165.1 Protein Homology CDS 1462305 1463564 . - 0 ID=cds-WP_221069620.1;Parent=gene-VA249_RS07125;Dbxref=Genbank:WP_221069620.1;Name=WP_221069620.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024968.2;locus_tag=VA249_RS07125;product=glycosyltransferase family 4 protein;protein_id=WP_221069620.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1463539 1465116 . - . ID=gene-VA249_RS07130;Name=VA249_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07130;old_locus_tag=VYA_13060 NZ_AP024165.1 Protein Homology CDS 1463539 1465116 . - 0 ID=cds-WP_221069622.1;Parent=gene-VA249_RS07130;Dbxref=Genbank:WP_221069622.1;Name=WP_221069622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385272.1;locus_tag=VA249_RS07130;product=sigma-54 dependent transcriptional regulator;protein_id=WP_221069622.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1465169 1465627 . - . ID=gene-VA249_RS07135;Name=VA249_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07135;old_locus_tag=VYA_13070 NZ_AP024165.1 Protein Homology CDS 1465169 1465627 . - 0 ID=cds-WP_221069624.1;Parent=gene-VA249_RS07135;Dbxref=Genbank:WP_221069624.1;Name=WP_221069624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013767.2;locus_tag=VA249_RS07135;product=Hpt domain-containing protein;protein_id=WP_221069624.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1465680 1466393 . - . ID=gene-VA249_RS07140;Name=VA249_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07140;old_locus_tag=VYA_13080 NZ_AP024165.1 GeneMarkS-2+ CDS 1465680 1466393 . - 0 ID=cds-WP_221069253.1;Parent=gene-VA249_RS07140;Dbxref=Genbank:WP_221069253.1;Name=WP_221069253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS07140;product=chromosome partitioning protein ParA;protein_id=WP_221069253.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1466393 1468462 . - . ID=gene-VA249_RS07145;Name=VA249_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07145;old_locus_tag=VYA_13090 NZ_AP024165.1 Protein Homology CDS 1466393 1468462 . - 0 ID=cds-WP_225927122.1;Parent=gene-VA249_RS07145;Dbxref=Genbank:WP_225927122.1;Name=WP_225927122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006962355.1;locus_tag=VA249_RS07145;product=SLBB domain-containing protein;protein_id=WP_225927122.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1468512 1469288 . - . ID=gene-VA249_RS07150;Name=VA249_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07150;old_locus_tag=VYA_13100 NZ_AP024165.1 Protein Homology CDS 1468512 1469288 . - 0 ID=cds-WP_225927123.1;Parent=gene-VA249_RS07150;Dbxref=Genbank:WP_225927123.1;Name=WP_225927123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017039911.1;locus_tag=VA249_RS07150;product=OmpA family protein;protein_id=WP_225927123.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1469461 1469814 . - . ID=gene-VA249_RS07155;Name=VA249_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07155;old_locus_tag=VYA_13110 NZ_AP024165.1 Protein Homology CDS 1469461 1469814 . - 0 ID=cds-WP_221069629.1;Parent=gene-VA249_RS07155;Dbxref=Genbank:WP_221069629.1;Name=WP_221069629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017105482.1;locus_tag=VA249_RS07155;product=STAS domain-containing protein;protein_id=WP_221069629.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1469981 1471684 . - . ID=gene-VA249_RS07160;Name=VA249_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07160;old_locus_tag=VYA_13120 NZ_AP024165.1 Protein Homology CDS 1469981 1471684 . - 0 ID=cds-WP_221069631.1;Parent=gene-VA249_RS07160;Dbxref=Genbank:WP_221069631.1;Name=WP_221069631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017032226.1;locus_tag=VA249_RS07160;product=ATP-binding protein;protein_id=WP_221069631.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1471691 1472230 . - . ID=gene-VA249_RS07165;Name=VA249_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07165;old_locus_tag=VYA_13130 NZ_AP024165.1 Protein Homology CDS 1471691 1472230 . - 0 ID=cds-WP_221069632.1;Parent=gene-VA249_RS07165;Dbxref=Genbank:WP_221069632.1;Name=WP_221069632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494783.1;locus_tag=VA249_RS07165;product=heme NO-binding domain-containing protein;protein_id=WP_221069632.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1472502 1473440 . - . ID=gene-VA249_RS07170;Name=VA249_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07170;old_locus_tag=VYA_13140 NZ_AP024165.1 Protein Homology CDS 1472502 1473440 . - 0 ID=cds-WP_225927111.1;Parent=gene-VA249_RS07170;Dbxref=Genbank:WP_225927111.1;Name=WP_225927111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448210.1;locus_tag=VA249_RS07170;product=universal stress protein;protein_id=WP_225927111.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1473664 1474755 . + . ID=gene-VA249_RS07175;Name=VA249_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07175;old_locus_tag=VYA_13150 NZ_AP024165.1 Protein Homology CDS 1473664 1474755 . + 0 ID=cds-WP_221069634.1;Parent=gene-VA249_RS07175;Dbxref=Genbank:WP_221069634.1;Name=WP_221069634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427778.1;locus_tag=VA249_RS07175;product=choloylglycine hydrolase family protein;protein_id=WP_221069634.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1474926 1476221 . - . ID=gene-VA249_RS07180;Name=VA249_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07180;old_locus_tag=VYA_13160 NZ_AP024165.1 Protein Homology CDS 1474926 1476221 . - 0 ID=cds-WP_221069635.1;Parent=gene-VA249_RS07180;Dbxref=Genbank:WP_221069635.1;Name=WP_221069635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442923.1;locus_tag=VA249_RS07180;product=mechanosensitive ion channel family protein;protein_id=WP_221069635.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1476503 1477063 . + . ID=gene-VA249_RS07185;Name=VA249_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07185;old_locus_tag=VYA_13170 NZ_AP024165.1 Protein Homology CDS 1476503 1477063 . + 0 ID=cds-WP_221069637.1;Parent=gene-VA249_RS07185;Dbxref=Genbank:WP_221069637.1;Name=WP_221069637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697518.1;locus_tag=VA249_RS07185;product=DUF308 domain-containing protein;protein_id=WP_221069637.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1477189 1478091 . - . ID=gene-VA249_RS07190;Name=VA249_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07190;old_locus_tag=VYA_13180 NZ_AP024165.1 Protein Homology CDS 1477189 1478091 . - 0 ID=cds-WP_221069638.1;Parent=gene-VA249_RS07190;Dbxref=Genbank:WP_221069638.1;Name=WP_221069638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820923.1;locus_tag=VA249_RS07190;product=EamA family transporter;protein_id=WP_221069638.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1478230 1478664 . + . ID=gene-VA249_RS07195;Name=VA249_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07195;old_locus_tag=VYA_13190 NZ_AP024165.1 Protein Homology CDS 1478230 1478664 . + 0 ID=cds-WP_221069640.1;Parent=gene-VA249_RS07195;Dbxref=Genbank:WP_221069640.1;Name=WP_221069640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448194.1;locus_tag=VA249_RS07195;product=DUF962 domain-containing protein;protein_id=WP_221069640.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1479062 1479394 . + . ID=gene-VA249_RS07200;Name=VA249_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07200;old_locus_tag=VYA_13200 NZ_AP024165.1 Protein Homology CDS 1479062 1479394 . + 0 ID=cds-WP_221069863.1;Parent=gene-VA249_RS07200;Dbxref=Genbank:WP_221069863.1;Name=WP_221069863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464576.1;locus_tag=VA249_RS07200;product=hypothetical protein;protein_id=WP_221069863.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1479521 1480129 . + . ID=gene-VA249_RS07205;Name=VA249_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07205;old_locus_tag=VYA_13210 NZ_AP024165.1 Protein Homology CDS 1479521 1480129 . + 0 ID=cds-WP_221069642.1;Parent=gene-VA249_RS07205;Dbxref=Genbank:WP_221069642.1;Name=WP_221069642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442977.1;locus_tag=VA249_RS07205;product=sugar O-acetyltransferase;protein_id=WP_221069642.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1480349 1484833 . + . ID=gene-VA249_RS07210;Name=VA249_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07210;old_locus_tag=VYA_13220 NZ_AP024165.1 Protein Homology CDS 1480349 1484833 . + 0 ID=cds-WP_221069651.1;Parent=gene-VA249_RS07210;Dbxref=Genbank:WP_221069651.1;Name=WP_221069651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017069452.1;locus_tag=VA249_RS07210;product=SslE/AcfD family lipoprotein zinc metalloprotease;protein_id=WP_221069651.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1484965 1485354 . + . ID=gene-VA249_RS07215;Name=VA249_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07215;old_locus_tag=VYA_13230 NZ_AP024165.1 Protein Homology CDS 1484965 1485354 . + 0 ID=cds-WP_221069653.1;Parent=gene-VA249_RS07215;Dbxref=Genbank:WP_221069653.1;Name=WP_221069653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528330.1;locus_tag=VA249_RS07215;product=AAA family ATPase;protein_id=WP_221069653.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1485509 1486348 . + . ID=gene-VA249_RS07220;Name=VA249_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07220;old_locus_tag=VYA_13240 NZ_AP024165.1 Protein Homology CDS 1485509 1486348 . + 0 ID=cds-WP_221069654.1;Parent=gene-VA249_RS07220;Dbxref=Genbank:WP_221069654.1;Name=WP_221069654.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006742936.1;locus_tag=VA249_RS07220;product=DNA ligase;protein_id=WP_221069654.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1486390 1487406 . - . ID=gene-VA249_RS07225;Name=VA249_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07225;old_locus_tag=VYA_13250 NZ_AP024165.1 Protein Homology CDS 1486390 1487406 . - 0 ID=cds-WP_221069656.1;Parent=gene-VA249_RS07225;Dbxref=Genbank:WP_221069656.1;Name=WP_221069656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647729.1;locus_tag=VA249_RS07225;product=DUF3080 family protein;protein_id=WP_221069656.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1487612 1488982 . - . ID=gene-VA249_RS07230;Name=VA249_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07230;old_locus_tag=VYA_13260 NZ_AP024165.1 Protein Homology CDS 1487612 1488982 . - 0 ID=cds-WP_221069657.1;Parent=gene-VA249_RS07230;Dbxref=Genbank:WP_221069657.1;Name=WP_221069657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555127.1;locus_tag=VA249_RS07230;product=MATE family efflux transporter;protein_id=WP_221069657.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1489380 1489994 . + . ID=gene-VA249_RS07235;Name=VA249_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07235;old_locus_tag=VYA_13270 NZ_AP024165.1 Protein Homology CDS 1489380 1489994 . + 0 ID=cds-WP_221069234.1;Parent=gene-VA249_RS07235;Dbxref=Genbank:WP_221069234.1;Name=WP_221069234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296718.1;locus_tag=VA249_RS07235;product=riboflavin synthase subunit alpha;protein_id=WP_221069234.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1490190 1490384 . - . ID=gene-VA249_RS07240;Name=VA249_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07240;old_locus_tag=VYA_13280 NZ_AP024165.1 Protein Homology CDS 1490190 1490384 . - 0 ID=cds-WP_128810909.1;Parent=gene-VA249_RS07240;Dbxref=Genbank:WP_128810909.1;Name=WP_128810909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427574.1;locus_tag=VA249_RS07240;product=CPXCG motif-containing cysteine-rich protein;protein_id=WP_128810909.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1490757 1491623 . - . ID=gene-VA249_RS07245;Name=VA249_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07245;old_locus_tag=VYA_13290 NZ_AP024165.1 Protein Homology CDS 1490757 1491623 . - 0 ID=cds-WP_221069233.1;Parent=gene-VA249_RS07245;Dbxref=Genbank:WP_221069233.1;Name=WP_221069233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127940.1;locus_tag=VA249_RS07245;product=fructosamine kinase family protein;protein_id=WP_221069233.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1491848 1492822 . + . ID=gene-VA249_RS07250;Name=VA249_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07250;old_locus_tag=VYA_13300 NZ_AP024165.1 Protein Homology CDS 1491848 1492822 . + 0 ID=cds-WP_221069660.1;Parent=gene-VA249_RS07250;Dbxref=Genbank:WP_221069660.1;Name=WP_221069660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127941.1;locus_tag=VA249_RS07250;product=response regulator;protein_id=WP_221069660.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1492822 1493784 . + . ID=gene-VA249_RS07255;Name=VA249_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07255;old_locus_tag=VYA_13310 NZ_AP024165.1 Protein Homology CDS 1492822 1493784 . + 0 ID=cds-WP_221069661.1;Parent=gene-VA249_RS07255;Dbxref=Genbank:WP_221069661.1;Name=WP_221069661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453915.1;locus_tag=VA249_RS07255;product=GGDEF domain-containing protein;protein_id=WP_221069661.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1493928 1494272 . + . ID=gene-VA249_RS07260;Name=VA249_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07260;old_locus_tag=VYA_13320 NZ_AP024165.1 Protein Homology CDS 1493928 1494272 . + 0 ID=cds-WP_128810906.1;Parent=gene-VA249_RS07260;Dbxref=Genbank:WP_128810906.1;Name=WP_128810906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004744053.1;locus_tag=VA249_RS07260;product=DUF3802 family protein;protein_id=WP_128810906.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1494367 1494873 . - . ID=gene-VA249_RS07265;Name=VA249_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07265;old_locus_tag=VYA_13330 NZ_AP024165.1 Protein Homology CDS 1494367 1494873 . - 0 ID=cds-WP_221069663.1;Parent=gene-VA249_RS07265;Dbxref=Genbank:WP_221069663.1;Name=WP_221069663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427745.1;locus_tag=VA249_RS07265;product=NlpC/P60 family protein;protein_id=WP_221069663.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1495405 1495788 . + . ID=gene-VA249_RS07270;Name=VA249_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07270;old_locus_tag=VYA_13340 NZ_AP024165.1 Protein Homology CDS 1495405 1495788 . + 0 ID=cds-WP_225927112.1;Parent=gene-VA249_RS07270;Dbxref=Genbank:WP_225927112.1;Name=WP_225927112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448293.1;locus_tag=VA249_RS07270;product=hypothetical protein;protein_id=WP_225927112.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1495815 1496624 . - . ID=gene-VA249_RS07275;Name=VA249_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07275;old_locus_tag=VYA_13350 NZ_AP024165.1 Protein Homology CDS 1495815 1496624 . - 0 ID=cds-WP_221069665.1;Parent=gene-VA249_RS07275;Dbxref=Genbank:WP_221069665.1;Name=WP_221069665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427634.1;locus_tag=VA249_RS07275;product=sterol desaturase family protein;protein_id=WP_221069665.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1496881 1497630 . + . ID=gene-VA249_RS07280;Name=VA249_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07280;old_locus_tag=VYA_13360 NZ_AP024165.1 Protein Homology CDS 1496881 1497630 . + 0 ID=cds-WP_221069667.1;Parent=gene-VA249_RS07280;Dbxref=Genbank:WP_221069667.1;Name=WP_221069667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197400.1;locus_tag=VA249_RS07280;product=DTW domain-containing protein;protein_id=WP_221069667.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1497806 1498714 . + . ID=gene-VA249_RS07285;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=VA249_RS07285;old_locus_tag=VYA_13370 NZ_AP024165.1 Protein Homology CDS 1497806 1498714 . + 0 ID=cds-WP_221069224.1;Parent=gene-VA249_RS07285;Dbxref=Genbank:WP_221069224.1;Name=WP_221069224.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820672.1;locus_tag=VA249_RS07285;product=N-acetylglucosamine kinase;protein_id=WP_221069224.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1498816 1499082 . - . ID=gene-VA249_RS07290;Name=VA249_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07290;old_locus_tag=VYA_13380 NZ_AP024165.1 Protein Homology CDS 1498816 1499082 . - 0 ID=cds-WP_221069222.1;Parent=gene-VA249_RS07290;Dbxref=Genbank:WP_221069222.1;Name=WP_221069222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841622.1;locus_tag=VA249_RS07290;product=DUF2960 family protein;protein_id=WP_221069222.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1499157 1500935 . - . ID=gene-VA249_RS07295;Name=VA249_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07295;old_locus_tag=VYA_13390 NZ_AP024165.1 Protein Homology CDS 1499157 1500935 . - 0 ID=cds-WP_221069669.1;Parent=gene-VA249_RS07295;Dbxref=Genbank:WP_221069669.1;Name=WP_221069669.1;Ontology_term=GO:0032324,GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296728.1;locus_tag=VA249_RS07295;product=bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA;protein_id=WP_221069669.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1500932 1501519 . - . ID=gene-VA249_RS07300;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=VA249_RS07300;old_locus_tag=VYA_13400 NZ_AP024165.1 Protein Homology CDS 1500932 1501519 . - 0 ID=cds-WP_221069671.1;Parent=gene-VA249_RS07300;Dbxref=Genbank:WP_221069671.1;Name=WP_221069671.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mobA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528415.1;locus_tag=VA249_RS07300;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_221069671.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1501497 1502216 . - . ID=gene-VA249_RS07305;Name=VA249_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07305;old_locus_tag=VYA_13410 NZ_AP024165.1 Protein Homology CDS 1501497 1502216 . - 0 ID=cds-WP_221069673.1;Parent=gene-VA249_RS07305;Dbxref=Genbank:WP_221069673.1;Name=WP_221069673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817427.1;locus_tag=VA249_RS07305;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_221069673.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1502260 1502958 . - . ID=gene-VA249_RS07310;Name=VA249_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07310;old_locus_tag=VYA_13420 NZ_AP024165.1 Protein Homology CDS 1502260 1502958 . - 0 ID=cds-WP_128810899.1;Parent=gene-VA249_RS07310;Dbxref=Genbank:WP_128810899.1;Name=WP_128810899.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061038.1;locus_tag=VA249_RS07310;product=ABC transporter permease;protein_id=WP_128810899.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1502965 1503783 . - . ID=gene-VA249_RS07315;Name=VA249_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07315;old_locus_tag=VYA_13430 NZ_AP024165.1 Protein Homology CDS 1502965 1503783 . - 0 ID=cds-WP_221069215.1;Parent=gene-VA249_RS07315;Dbxref=Genbank:WP_221069215.1;Name=WP_221069215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296729.1;locus_tag=VA249_RS07315;product=substrate-binding domain-containing protein;protein_id=WP_221069215.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1504147 1505598 . + . ID=gene-VA249_RS07320;Name=VA249_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07320;old_locus_tag=VYA_13440 NZ_AP024165.1 Protein Homology CDS 1504147 1505598 . + 0 ID=cds-WP_221069675.1;Parent=gene-VA249_RS07320;Dbxref=Genbank:WP_221069675.1;Name=WP_221069675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197403.1;locus_tag=VA249_RS07320;product=sigma-54 dependent transcriptional regulator;protein_id=WP_221069675.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1505588 1507624 . + . ID=gene-VA249_RS07325;Name=VA249_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07325;old_locus_tag=VYA_13450 NZ_AP024165.1 Protein Homology CDS 1505588 1507624 . + 0 ID=cds-WP_221069677.1;Parent=gene-VA249_RS07325;Dbxref=Genbank:WP_221069677.1;Name=WP_221069677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005479449.1;locus_tag=VA249_RS07325;product=cache domain-containing protein;protein_id=WP_221069677.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1507786 1509222 . - . ID=gene-VA249_RS07330;Name=VA249_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07330;old_locus_tag=VYA_13460 NZ_AP024165.1 Protein Homology CDS 1507786 1509222 . - 0 ID=cds-WP_221067583.1-5;Parent=gene-VA249_RS07330;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS07330;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1509393 1510271 . - . ID=gene-VA249_RS07335;Name=VA249_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07335;old_locus_tag=VYA_13470 NZ_AP024165.1 Protein Homology CDS 1509393 1510271 . - 0 ID=cds-WP_221069209.1;Parent=gene-VA249_RS07335;Dbxref=Genbank:WP_221069209.1;Name=WP_221069209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427576.1;locus_tag=VA249_RS07335;product=mechanosensitive ion channel family protein;protein_id=WP_221069209.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1510274 1512619 . - . ID=gene-VA249_RS07340;Name=VA249_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07340;old_locus_tag=VYA_13480 NZ_AP024165.1 Protein Homology CDS 1510274 1512619 . - 0 ID=cds-WP_221069680.1;Parent=gene-VA249_RS07340;Dbxref=Genbank:WP_221069680.1;Name=WP_221069680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008217913.1;locus_tag=VA249_RS07340;product=ATP-binding protein;protein_id=WP_221069680.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1513032 1514624 . + . ID=gene-VA249_RS07345;Name=VA249_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07345;old_locus_tag=VYA_13490 NZ_AP024165.1 Protein Homology CDS 1513032 1514624 . + 0 ID=cds-WP_221069681.1;Parent=gene-VA249_RS07345;Dbxref=Genbank:WP_221069681.1;Name=WP_221069681.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625978.1;locus_tag=VA249_RS07345;product=ABC-F family ATPase;protein_id=WP_221069681.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1514876 1515700 . - . ID=gene-VA249_RS07350;Name=VA249_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07350;old_locus_tag=VYA_13500 NZ_AP024165.1 Protein Homology CDS 1514876 1515700 . - 0 ID=cds-WP_221069876.1;Parent=gene-VA249_RS07350;Dbxref=Genbank:WP_221069876.1;Name=WP_221069876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528431.1;locus_tag=VA249_RS07350;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_221069876.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1516076 1516540 . + . ID=gene-VA249_RS07355;Name=VA249_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07355;old_locus_tag=VYA_13510 NZ_AP024165.1 Protein Homology CDS 1516076 1516540 . + 0 ID=cds-WP_128810893.1;Parent=gene-VA249_RS07355;Dbxref=Genbank:WP_128810893.1;Name=WP_128810893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016786345.1;locus_tag=VA249_RS07355;product=DUF3305 domain-containing protein;protein_id=WP_128810893.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1516530 1517153 . + . ID=gene-VA249_RS07360;Name=VA249_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07360;old_locus_tag=VYA_13520 NZ_AP024165.1 Protein Homology CDS 1516530 1517153 . + 0 ID=cds-WP_221069683.1;Parent=gene-VA249_RS07360;Dbxref=Genbank:WP_221069683.1;Name=WP_221069683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441572.1;locus_tag=VA249_RS07360;product=DUF3306 domain-containing protein;protein_id=WP_221069683.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1517460 1519121 . + . ID=gene-VA249_RS07365;Name=VA249_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07365;old_locus_tag=VYA_13530 NZ_AP024165.1 Protein Homology CDS 1517460 1519121 . + 0 ID=cds-WP_128810892.1;Parent=gene-VA249_RS07365;Dbxref=Genbank:WP_128810892.1;Name=WP_128810892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016768069.1;locus_tag=VA249_RS07365;product=4Fe-4S binding protein;protein_id=WP_128810892.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1519131 1519763 . + . ID=gene-VA249_RS07370;Name=VA249_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07370;old_locus_tag=VYA_13540 NZ_AP024165.1 Protein Homology CDS 1519131 1519763 . + 0 ID=cds-WP_221069684.1;Parent=gene-VA249_RS07370;Dbxref=Genbank:WP_221069684.1;Name=WP_221069684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016800800.1;locus_tag=VA249_RS07370;product=molecular chaperone TorD family protein;protein_id=WP_221069684.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1519837 1520037 . + . ID=gene-VA249_RS07375;Name=VA249_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07375;old_locus_tag=VYA_13550 NZ_AP024165.1 Protein Homology CDS 1519837 1520037 . + 0 ID=cds-WP_221069878.1;Parent=gene-VA249_RS07375;Dbxref=Genbank:WP_221069878.1;Name=WP_221069878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733728.1;locus_tag=VA249_RS07375;product=twin-arginine translocation signal domain-containing protein;protein_id=WP_221069878.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1520048 1522903 . + . ID=gene-VA249_RS07380;Name=VA249_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07380;old_locus_tag=VYA_13560 NZ_AP024165.1 Protein Homology CDS 1520048 1522903 . + 0 ID=cds-WP_221069685.1;Parent=gene-VA249_RS07380;Dbxref=Genbank:WP_221069685.1;Name=WP_221069685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190158.1;locus_tag=VA249_RS07380;product=formate dehydrogenase subunit alpha;protein_id=WP_221069685.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1522915 1523523 . + . ID=gene-VA249_RS07385;Name=fdh3B;gbkey=Gene;gene=fdh3B;gene_biotype=protein_coding;locus_tag=VA249_RS07385;old_locus_tag=VYA_13570 NZ_AP024165.1 Protein Homology CDS 1522915 1523523 . + 0 ID=cds-WP_128810889.1;Parent=gene-VA249_RS07385;Dbxref=Genbank:WP_128810889.1;Name=WP_128810889.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fdh3B;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004725926.1;locus_tag=VA249_RS07385;product=formate dehydrogenase FDH3 subunit beta;protein_id=WP_128810889.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1523538 1524590 . + . ID=gene-VA249_RS07390;Name=VA249_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07390;old_locus_tag=VYA_13580 NZ_AP024165.1 Protein Homology CDS 1523538 1524590 . + 0 ID=cds-WP_221069687.1;Parent=gene-VA249_RS07390;Dbxref=Genbank:WP_221069687.1;Name=WP_221069687.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528437.1;locus_tag=VA249_RS07390;product=formate dehydrogenase subunit gamma;protein_id=WP_221069687.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1524574 1524990 . + . ID=gene-VA249_RS07395;Name=VA249_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07395;old_locus_tag=VYA_13590 NZ_AP024165.1 Protein Homology CDS 1524574 1524990 . + 0 ID=cds-WP_128810887.1;Parent=gene-VA249_RS07395;Dbxref=Genbank:WP_128810887.1;Name=WP_128810887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017059624.1;locus_tag=VA249_RS07395;product=hypothetical protein;protein_id=WP_128810887.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1525168 1525899 . + . ID=gene-VA249_RS07400;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=VA249_RS07400;old_locus_tag=VYA_13600 NZ_AP024165.1 Protein Homology CDS 1525168 1525899 . + 0 ID=cds-WP_221069689.1;Parent=gene-VA249_RS07400;Dbxref=Genbank:WP_221069689.1;Name=WP_221069689.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445795.1;locus_tag=VA249_RS07400;product=NAD-dependent protein deacylase;protein_id=WP_221069689.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1526073 1527110 . - . ID=gene-VA249_RS07405;Name=VA249_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07405;old_locus_tag=VYA_13610 NZ_AP024165.1 Protein Homology CDS 1526073 1527110 . - 0 ID=cds-WP_128810884.1;Parent=gene-VA249_RS07405;Dbxref=Genbank:WP_128810884.1;Name=WP_128810884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634903.1;locus_tag=VA249_RS07405;product=extracellular solute-binding protein;protein_id=WP_128810884.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1527407 1528438 . - . ID=gene-VA249_RS07410;Name=VA249_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07410;old_locus_tag=VYA_13620 NZ_AP024165.1 Protein Homology CDS 1527407 1528438 . - 0 ID=cds-WP_211919003.1;Parent=gene-VA249_RS07410;Dbxref=Genbank:WP_211919003.1;Name=WP_211919003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112087.1;locus_tag=VA249_RS07410;product=extracellular solute-binding protein;protein_id=WP_211919003.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1528544 1529314 . - . ID=gene-VA249_RS07415;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=VA249_RS07415;old_locus_tag=VYA_13630 NZ_AP024165.1 Protein Homology CDS 1528544 1529314 . - 0 ID=cds-WP_221069691.1;Parent=gene-VA249_RS07415;Dbxref=Genbank:WP_221069691.1;Name=WP_221069691.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533750.1;locus_tag=VA249_RS07415;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_221069691.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1529314 1530174 . - . ID=gene-VA249_RS07420;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=VA249_RS07420;old_locus_tag=VYA_13640 NZ_AP024165.1 Protein Homology CDS 1529314 1530174 . - 0 ID=cds-WP_211919001.1;Parent=gene-VA249_RS07420;Dbxref=Genbank:WP_211919001.1;Name=WP_211919001.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013856884.1;locus_tag=VA249_RS07420;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_211919001.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1530155 1531270 . - . ID=gene-VA249_RS07425;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=VA249_RS07425;old_locus_tag=VYA_13650 NZ_AP024165.1 Protein Homology CDS 1530155 1531270 . - 0 ID=cds-WP_225923917.1;Parent=gene-VA249_RS07425;Dbxref=Genbank:WP_225923917.1;Name=WP_225923917.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004414057.1;locus_tag=VA249_RS07425;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_225923917.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1531671 1532468 . + . ID=gene-VA249_RS07430;Name=VA249_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07430;old_locus_tag=VYA_13660 NZ_AP024165.1 Protein Homology CDS 1531671 1532468 . + 0 ID=cds-WP_221069693.1;Parent=gene-VA249_RS07430;Dbxref=Genbank:WP_221069693.1;Name=WP_221069693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447927.1;locus_tag=VA249_RS07430;product=hypothetical protein;protein_id=WP_221069693.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1532461 1533297 . + . ID=gene-VA249_RS07435;Name=VA249_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07435;old_locus_tag=VYA_13670 NZ_AP024165.1 Protein Homology CDS 1532461 1533297 . + 0 ID=cds-WP_221069695.1;Parent=gene-VA249_RS07435;Dbxref=Genbank:WP_221069695.1;Name=WP_221069695.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817437.1;locus_tag=VA249_RS07435;product=glucosaminidase domain-containing protein;protein_id=WP_221069695.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1533316 1533978 . + . ID=gene-VA249_RS07440;Name=VA249_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07440;old_locus_tag=VYA_13680 NZ_AP024165.1 Protein Homology CDS 1533316 1533978 . + 0 ID=cds-WP_221069697.1;Parent=gene-VA249_RS07440;Dbxref=Genbank:WP_221069697.1;Name=WP_221069697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441599.1;locus_tag=VA249_RS07440;product=DUF2987 domain-containing protein;protein_id=WP_221069697.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1534178 1535071 . + . ID=gene-VA249_RS07445;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=VA249_RS07445;old_locus_tag=VYA_13690 NZ_AP024165.1 Protein Homology CDS 1534178 1535071 . + 0 ID=cds-WP_128810878.1;Parent=gene-VA249_RS07445;Dbxref=Genbank:WP_128810878.1;Name=WP_128810878.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016767208.1;locus_tag=VA249_RS07445;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_128810878.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1535310 1536257 . - . ID=gene-VA249_RS07450;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=VA249_RS07450;old_locus_tag=VYA_13700 NZ_AP024165.1 Protein Homology CDS 1535310 1536257 . - 0 ID=cds-WP_128810877.1;Parent=gene-VA249_RS07450;Dbxref=Genbank:WP_128810877.1;Name=WP_128810877.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006742588.1;locus_tag=VA249_RS07450;product=universal stress protein UspE;protein_id=WP_128810877.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1536439 1537185 . - . ID=gene-VA249_RS07455;Name=VA249_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07455;old_locus_tag=VYA_13710 NZ_AP024165.1 Protein Homology CDS 1536439 1537185 . - 0 ID=cds-WP_128810876.1;Parent=gene-VA249_RS07455;Dbxref=Genbank:WP_128810876.1;Name=WP_128810876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733691.1;locus_tag=VA249_RS07455;product=FNR family transcription factor;protein_id=WP_128810876.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1537276 1537953 . - . ID=gene-VA249_RS07460;Name=VA249_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07460;old_locus_tag=VYA_13720 NZ_AP024165.1 Protein Homology CDS 1537276 1537953 . - 0 ID=cds-WP_221069699.1;Parent=gene-VA249_RS07460;Dbxref=Genbank:WP_221069699.1;Name=WP_221069699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447938.1;locus_tag=VA249_RS07460;product=sulfite exporter TauE/SafE family protein;protein_id=WP_221069699.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1537963 1538148 . - . ID=gene-VA249_RS07465;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=VA249_RS07465;old_locus_tag=VYA_13730 NZ_AP024165.1 Protein Homology CDS 1537963 1538148 . - 0 ID=cds-WP_128810875.1;Parent=gene-VA249_RS07465;Dbxref=Genbank:WP_128810875.1;Name=WP_128810875.1;Ontology_term=GO:0008535;gbkey=CDS;gene=ccoS;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004403503.1;locus_tag=VA249_RS07465;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=WP_128810875.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1538163 1540526 . - . ID=gene-VA249_RS07470;Name=VA249_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07470;old_locus_tag=VYA_13740 NZ_AP024165.1 Protein Homology CDS 1538163 1540526 . - 0 ID=cds-WP_221069700.1;Parent=gene-VA249_RS07470;Dbxref=Genbank:WP_221069700.1;Name=WP_221069700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333284.1;locus_tag=VA249_RS07470;product=heavy metal translocating P-type ATPase;protein_id=WP_221069700.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1540531 1541007 . - . ID=gene-VA249_RS07475;Name=VA249_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07475;old_locus_tag=VYA_13750 NZ_AP024165.1 Protein Homology CDS 1540531 1541007 . - 0 ID=cds-WP_221069703.1;Parent=gene-VA249_RS07475;Dbxref=Genbank:WP_221069703.1;Name=WP_221069703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445775.1;locus_tag=VA249_RS07475;product=FixH family protein;protein_id=WP_221069703.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1541098 1542072 . - . ID=gene-VA249_RS07480;Name=ccoP;gbkey=Gene;gene=ccoP;gene_biotype=protein_coding;locus_tag=VA249_RS07480;old_locus_tag=VYA_13760 NZ_AP024165.1 Protein Homology CDS 1541098 1542072 . - 0 ID=cds-WP_221069705.1;Parent=gene-VA249_RS07480;Dbxref=Genbank:WP_221069705.1;Name=WP_221069705.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoP;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017632471.1;locus_tag=VA249_RS07480;product=cytochrome-c oxidase%2C cbb3-type subunit III;protein_id=WP_221069705.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1542072 1542245 . - . ID=gene-VA249_RS07485;Name=VA249_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07485;old_locus_tag=VYA_13770 NZ_AP024165.1 Protein Homology CDS 1542072 1542245 . - 0 ID=cds-WP_005396487.1;Parent=gene-VA249_RS07485;Dbxref=Genbank:WP_005396487.1;Name=WP_005396487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429887.1;locus_tag=VA249_RS07485;product=CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone;protein_id=WP_005396487.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1542255 1542875 . - . ID=gene-VA249_RS07490;Name=ccoO;gbkey=Gene;gene=ccoO;gene_biotype=protein_coding;locus_tag=VA249_RS07490;old_locus_tag=VYA_13780 NZ_AP024165.1 Protein Homology CDS 1542255 1542875 . - 0 ID=cds-WP_005441610.1;Parent=gene-VA249_RS07490;Dbxref=Genbank:WP_005441610.1;Name=WP_005441610.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoO;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006962259.1;locus_tag=VA249_RS07490;product=cytochrome-c oxidase%2C cbb3-type subunit II;protein_id=WP_005441610.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1542888 1544315 . - . ID=gene-VA249_RS07495;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=VA249_RS07495;old_locus_tag=VYA_13790 NZ_AP024165.1 Protein Homology CDS 1542888 1544315 . - 0 ID=cds-WP_164837183.1;Parent=gene-VA249_RS07495;Dbxref=Genbank:WP_164837183.1;Name=WP_164837183.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoN;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076729.1;locus_tag=VA249_RS07495;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=WP_164837183.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1544572 1544928 . + . ID=gene-VA249_RS07500;Name=VA249_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07500;old_locus_tag=VYA_13800 NZ_AP024165.1 Protein Homology CDS 1544572 1544928 . + 0 ID=cds-WP_221069707.1;Parent=gene-VA249_RS07500;Dbxref=Genbank:WP_221069707.1;Name=WP_221069707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445770.1;locus_tag=VA249_RS07500;product=hypothetical protein;protein_id=WP_221069707.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1545042 1546229 . + . ID=gene-VA249_RS07505;Name=VA249_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07505;old_locus_tag=VYA_13810 NZ_AP024165.1 Protein Homology CDS 1545042 1546229 . + 0 ID=cds-WP_221069709.1;Parent=gene-VA249_RS07505;Dbxref=Genbank:WP_221069709.1;Name=WP_221069709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817441.1;locus_tag=VA249_RS07505;product=FIST C-terminal domain-containing protein;protein_id=WP_221069709.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1546219 1547952 . + . ID=gene-VA249_RS07510;Name=VA249_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07510;old_locus_tag=VYA_13820 NZ_AP024165.1 Protein Homology CDS 1546219 1547952 . + 0 ID=cds-WP_221069711.1;Parent=gene-VA249_RS07510;Dbxref=Genbank:WP_221069711.1;Name=WP_221069711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190163.1;locus_tag=VA249_RS07510;product=ATP-binding protein;protein_id=WP_221069711.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1548733 1549947 . - . ID=gene-VA249_RS07515;Name=VA249_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07515;old_locus_tag=VYA_13830 NZ_AP024165.1 Protein Homology CDS 1548733 1549947 . - 0 ID=cds-WP_221069713.1;Parent=gene-VA249_RS07515;Dbxref=Genbank:WP_221069713.1;Name=WP_221069713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446829.1;locus_tag=VA249_RS07515;product=HDOD domain-containing protein;protein_id=WP_221069713.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1550058 1550381 . - . ID=gene-VA249_RS24105;Name=VA249_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24105;old_locus_tag=VYA_13840 NZ_AP024165.1 Protein Homology CDS 1550058 1550381 . - 0 ID=cds-WP_225927113.1;Parent=gene-VA249_RS24105;Dbxref=Genbank:WP_225927113.1;Name=WP_225927113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528492.1;locus_tag=VA249_RS24105;product=hypothetical protein;protein_id=WP_225927113.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1550506 1550817 . - . ID=gene-VA249_RS07520;Name=VA249_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07520;old_locus_tag=VYA_13850 NZ_AP024165.1 Protein Homology CDS 1550506 1550817 . - 0 ID=cds-WP_211920019.1;Parent=gene-VA249_RS07520;Dbxref=Genbank:WP_211920019.1;Name=WP_211920019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446826.1;locus_tag=VA249_RS07520;product=DUF3634 family protein;protein_id=WP_211920019.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1550828 1551277 . - . ID=gene-VA249_RS07525;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=VA249_RS07525;old_locus_tag=VYA_13860 NZ_AP024165.1 Protein Homology CDS 1550828 1551277 . - 0 ID=cds-WP_128810870.1;Parent=gene-VA249_RS07525;Dbxref=Genbank:WP_128810870.1;Name=WP_128810870.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197426.1;locus_tag=VA249_RS07525;product=macrodomain Ter protein MatP;protein_id=WP_128810870.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1551475 1553115 . + . ID=gene-VA249_RS07530;Name=VA249_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07530;old_locus_tag=VYA_13870 NZ_AP024165.1 Protein Homology CDS 1551475 1553115 . + 0 ID=cds-WP_221069715.1;Parent=gene-VA249_RS07530;Dbxref=Genbank:WP_221069715.1;Name=WP_221069715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841551.1;locus_tag=VA249_RS07530;product=Lon protease family protein;protein_id=WP_221069715.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1553186 1553704 . + . ID=gene-VA249_RS07535;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=VA249_RS07535;old_locus_tag=VYA_13880 NZ_AP024165.1 Protein Homology CDS 1553186 1553704 . + 0 ID=cds-WP_221069717.1;Parent=gene-VA249_RS07535;Dbxref=Genbank:WP_221069717.1;Name=WP_221069717.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275522.1;locus_tag=VA249_RS07535;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_221069717.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1553854 1554027 . - . ID=gene-VA249_RS07540;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=VA249_RS07540;old_locus_tag=VYA_13890 NZ_AP024165.1 Protein Homology CDS 1553854 1554027 . - 0 ID=cds-WP_005532367.1;Parent=gene-VA249_RS07540;Dbxref=Genbank:WP_005532367.1;Name=WP_005532367.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074275.1;locus_tag=VA249_RS07540;product=ribosome modulation factor;protein_id=WP_005532367.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1554199 1555869 . - . ID=gene-VA249_RS07545;Name=VA249_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07545;old_locus_tag=VYA_13900 NZ_AP024165.1 Protein Homology CDS 1554199 1555869 . - 0 ID=cds-WP_221069720.1;Parent=gene-VA249_RS07545;Dbxref=Genbank:WP_221069720.1;Name=WP_221069720.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023375.2;locus_tag=VA249_RS07545;product=DUF3466 family protein;protein_id=WP_221069720.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1555877 1557796 . - . ID=gene-VA249_RS07550;Name=VA249_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07550;old_locus_tag=VYA_13910 NZ_AP024165.1 Protein Homology CDS 1555877 1557796 . - 0 ID=cds-WP_221069721.1;Parent=gene-VA249_RS07550;Dbxref=Genbank:WP_221069721.1;Name=WP_221069721.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017630017.1;locus_tag=VA249_RS07550;product=ABC transporter ATP-binding protein;protein_id=WP_221069721.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1557774 1558025 . - . ID=gene-VA249_RS07555;Name=VA249_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07555;old_locus_tag=VYA_13920 NZ_AP024165.1 Protein Homology CDS 1557774 1558025 . - 0 ID=cds-WP_164837182.1;Parent=gene-VA249_RS07555;Dbxref=Genbank:WP_164837182.1;Name=WP_164837182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128011.1;locus_tag=VA249_RS07555;product=glutaredoxin family protein;protein_id=WP_164837182.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1558047 1560170 . - . ID=gene-VA249_RS07560;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=VA249_RS07560;old_locus_tag=VYA_13930 NZ_AP024165.1 Protein Homology CDS 1558047 1560170 . - 0 ID=cds-WP_221069724.1;Parent=gene-VA249_RS07560;Dbxref=Genbank:WP_221069724.1;Name=WP_221069724.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150263.1;locus_tag=VA249_RS07560;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_221069724.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1560680 1561222 . - . ID=gene-VA249_RS07565;Name=VA249_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07565;old_locus_tag=VYA_13940 NZ_AP024165.1 Protein Homology CDS 1560680 1561222 . - 0 ID=cds-WP_211920024.1;Parent=gene-VA249_RS07565;Dbxref=Genbank:WP_211920024.1;Name=WP_211920024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190184.1;locus_tag=VA249_RS07565;product=cell division protein ZapC;protein_id=WP_211920024.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1561387 1562397 . - . ID=gene-VA249_RS07570;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=VA249_RS07570;old_locus_tag=VYA_13950 NZ_AP024165.1 Protein Homology CDS 1561387 1562397 . - 0 ID=cds-WP_211920025.1;Parent=gene-VA249_RS07570;Dbxref=Genbank:WP_211920025.1;Name=WP_211920025.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966888.1;locus_tag=VA249_RS07570;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_211920025.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1562823 1567673 . - . ID=gene-VA249_RS07575;Name=VA249_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07575;old_locus_tag=VYA_13960 NZ_AP024165.1 Protein Homology CDS 1562823 1567673 . - 0 ID=cds-WP_221069726.1;Parent=gene-VA249_RS07575;Dbxref=Genbank:WP_221069726.1;Name=WP_221069726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004742313.1;locus_tag=VA249_RS07575;product=NAD-glutamate dehydrogenase;protein_id=WP_221069726.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1567872 1568090 . - . ID=gene-VA249_RS07580;Name=VA249_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07580 NZ_AP024165.1 Protein Homology CDS 1567872 1568090 . - 0 ID=cds-WP_221069727.1;Parent=gene-VA249_RS07580;Dbxref=Genbank:WP_221069727.1;Name=WP_221069727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010320560.1;locus_tag=VA249_RS07580;product=DUF2835 family protein;protein_id=WP_221069727.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1568150 1570756 . - . ID=gene-VA249_RS07585;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=VA249_RS07585;old_locus_tag=VYA_13970 NZ_AP024165.1 Protein Homology CDS 1568150 1570756 . - 0 ID=cds-WP_221069729.1;Parent=gene-VA249_RS07585;Dbxref=Genbank:WP_221069729.1;Name=WP_221069729.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841806.1;locus_tag=VA249_RS07585;product=aminopeptidase N;protein_id=WP_221069729.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1571036 1571701 . - . ID=gene-VA249_RS07590;Name=VA249_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07590;old_locus_tag=VYA_13980 NZ_AP024165.1 Protein Homology CDS 1571036 1571701 . - 0 ID=cds-WP_221069731.1;Parent=gene-VA249_RS07590;Dbxref=Genbank:WP_221069731.1;Name=WP_221069731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396553.1;locus_tag=VA249_RS07590;product=hypothetical protein;protein_id=WP_221069731.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1572028 1574022 . - . ID=gene-VA249_RS07595;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=VA249_RS07595;old_locus_tag=VYA_13990 NZ_AP024165.1 Protein Homology CDS 1572028 1574022 . - 0 ID=cds-WP_221069732.1;Parent=gene-VA249_RS07595;Dbxref=Genbank:WP_221069732.1;Name=WP_221069732.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841538.1;locus_tag=VA249_RS07595;product=carboxy terminal-processing peptidase;protein_id=WP_221069732.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1574040 1574666 . - . ID=gene-VA249_RS07600;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=VA249_RS07600;old_locus_tag=VYA_14000 NZ_AP024165.1 Protein Homology CDS 1574040 1574666 . - 0 ID=cds-WP_211920030.1;Parent=gene-VA249_RS07600;Dbxref=Genbank:WP_211920030.1;Name=WP_211920030.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446802.1;locus_tag=VA249_RS07600;product=RNA chaperone ProQ;protein_id=WP_211920030.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1574764 1575237 . - . ID=gene-VA249_RS07605;Name=VA249_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07605;old_locus_tag=VYA_14010 NZ_AP024165.1 Protein Homology CDS 1574764 1575237 . - 0 ID=cds-WP_221069734.1;Parent=gene-VA249_RS07605;Dbxref=Genbank:WP_221069734.1;Name=WP_221069734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017101111.1;locus_tag=VA249_RS07605;product=GAF domain-containing protein;protein_id=WP_221069734.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1575331 1577127 . + . ID=gene-VA249_RS07610;Name=VA249_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07610;old_locus_tag=VYA_14020 NZ_AP024165.1 Protein Homology CDS 1575331 1577127 . + 0 ID=cds-WP_221069736.1;Parent=gene-VA249_RS07610;Dbxref=Genbank:WP_221069736.1;Name=WP_221069736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019350841.1;locus_tag=VA249_RS07610;product=ABC transporter ATP-binding protein/permease;protein_id=WP_221069736.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1577149 1578396 . + . ID=gene-VA249_RS07615;Name=VA249_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07615;old_locus_tag=VYA_14030 NZ_AP024165.1 Protein Homology CDS 1577149 1578396 . + 0 ID=cds-WP_221069738.1;Parent=gene-VA249_RS07615;Dbxref=Genbank:WP_221069738.1;Name=WP_221069738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430985.1;locus_tag=VA249_RS07615;product=paraquat-inducible protein A;protein_id=WP_221069738.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1578389 1581043 . + . ID=gene-VA249_RS07620;Name=VA249_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07620;old_locus_tag=VYA_14040 NZ_AP024165.1 Protein Homology CDS 1578389 1581043 . + 0 ID=cds-WP_221069740.1;Parent=gene-VA249_RS07620;Dbxref=Genbank:WP_221069740.1;Name=WP_221069740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457104.1;locus_tag=VA249_RS07620;product=MlaD family protein;protein_id=WP_221069740.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1581261 1582697 . + . ID=gene-VA249_RS07625;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=VA249_RS07625;old_locus_tag=VYA_14050 NZ_AP024165.1 Protein Homology CDS 1581261 1582697 . + 0 ID=cds-WP_221069742.1;Parent=gene-VA249_RS07625;Dbxref=Genbank:WP_221069742.1;Name=WP_221069742.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074258.1;locus_tag=VA249_RS07625;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_221069742.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1582994 1583827 . - . ID=gene-VA249_RS07630;Name=VA249_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07630;old_locus_tag=VYA_14060 NZ_AP024165.1 Protein Homology CDS 1582994 1583827 . - 0 ID=cds-WP_221069744.1;Parent=gene-VA249_RS07630;Dbxref=Genbank:WP_221069744.1;Name=WP_221069744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841531.1;locus_tag=VA249_RS07630;product=S1-like domain-containing RNA-binding protein;protein_id=WP_221069744.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1584046 1585401 . + . ID=gene-VA249_RS07635;Name=VA249_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07635;old_locus_tag=VYA_14070 NZ_AP024165.1 Protein Homology CDS 1584046 1585401 . + 0 ID=cds-WP_221069746.1;Parent=gene-VA249_RS07635;Dbxref=Genbank:WP_221069746.1;Name=WP_221069746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333309.1;locus_tag=VA249_RS07635;product=hypothetical protein;protein_id=WP_221069746.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1585424 1585930 . - . ID=gene-VA249_RS07640;Name=VA249_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07640;old_locus_tag=VYA_14080 NZ_AP024165.1 Protein Homology CDS 1585424 1585930 . - 0 ID=cds-WP_221067559.1;Parent=gene-VA249_RS07640;Dbxref=Genbank:WP_221067559.1;Name=WP_221067559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396564.1;locus_tag=VA249_RS07640;product=DUF4442 domain-containing protein;protein_id=WP_221067559.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1586312 1587364 . + . ID=gene-VA249_RS07645;Name=VA249_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07645;old_locus_tag=VYA_14090 NZ_AP024165.1 Protein Homology CDS 1586312 1587364 . + 0 ID=cds-WP_128810851.1;Parent=gene-VA249_RS07645;Dbxref=Genbank:WP_128810851.1;Name=WP_128810851.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446791.1;locus_tag=VA249_RS07645;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_128810851.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1587397 1587879 . + . ID=gene-VA249_RS07650;Name=VA249_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07650;old_locus_tag=VYA_14100 NZ_AP024165.1 Protein Homology CDS 1587397 1587879 . + 0 ID=cds-WP_128810850.1;Parent=gene-VA249_RS07650;Dbxref=Genbank:WP_128810850.1;Name=WP_128810850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430971.1;locus_tag=VA249_RS07650;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_128810850.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1587993 1588913 . - . ID=gene-VA249_RS07655;Name=VA249_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07655;old_locus_tag=VYA_14110 NZ_AP024165.1 Protein Homology CDS 1587993 1588913 . - 0 ID=cds-WP_221069883.1;Parent=gene-VA249_RS07655;Dbxref=Genbank:WP_221069883.1;Name=WP_221069883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446778.1;locus_tag=VA249_RS07655;product=bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase;protein_id=WP_221069883.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1589468 1590496 . + . ID=gene-VA249_RS07660;Name=VA249_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07660;old_locus_tag=VYA_14120 NZ_AP024165.1 Protein Homology CDS 1589468 1590496 . + 0 ID=cds-WP_221067560.1;Parent=gene-VA249_RS07660;Dbxref=Genbank:WP_221067560.1;Name=WP_221067560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004726079.1;locus_tag=VA249_RS07660;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_221067560.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1590576 1591781 . + . ID=gene-VA249_RS07665;Name=VA249_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07665;old_locus_tag=VYA_14130 NZ_AP024165.1 Protein Homology CDS 1590576 1591781 . + 0 ID=cds-WP_221067561.1;Parent=gene-VA249_RS07665;Dbxref=Genbank:WP_221067561.1;Name=WP_221067561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019276938.1;locus_tag=VA249_RS07665;product=amino acid ABC transporter permease;protein_id=WP_221067561.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1591783 1592880 . + . ID=gene-VA249_RS07670;Name=VA249_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07670;old_locus_tag=VYA_14140 NZ_AP024165.1 Protein Homology CDS 1591783 1592880 . + 0 ID=cds-WP_221067562.1;Parent=gene-VA249_RS07670;Dbxref=Genbank:WP_221067562.1;Name=WP_221067562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457129.1;locus_tag=VA249_RS07670;product=amino acid ABC transporter permease;protein_id=WP_221067562.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1592904 1593653 . + . ID=gene-VA249_RS07675;Name=VA249_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07675;old_locus_tag=VYA_14150 NZ_AP024165.1 Protein Homology CDS 1592904 1593653 . + 0 ID=cds-WP_128810846.1;Parent=gene-VA249_RS07675;Dbxref=Genbank:WP_128810846.1;Name=WP_128810846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193742.1;locus_tag=VA249_RS07675;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_128810846.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1594012 1594674 . + . ID=gene-VA249_RS07680;Name=VA249_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07680;old_locus_tag=VYA_14160 NZ_AP024165.1 Protein Homology CDS 1594012 1594674 . + 0 ID=cds-WP_005446774.1;Parent=gene-VA249_RS07680;Dbxref=Genbank:WP_005446774.1;Name=WP_005446774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008078199.1;locus_tag=VA249_RS07680;product=Bax inhibitor-1/YccA family protein;protein_id=WP_005446774.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1595019 1595348 . + . ID=gene-VA249_RS07685;Name=VA249_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07685;old_locus_tag=VYA_14170 NZ_AP024165.1 Protein Homology CDS 1595019 1595348 . + 0 ID=cds-WP_128810845.1;Parent=gene-VA249_RS07685;Dbxref=Genbank:WP_128810845.1;Name=WP_128810845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522810.1;locus_tag=VA249_RS07685;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_128810845.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1595351 1595623 . - . ID=gene-VA249_RS07690;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=VA249_RS07690;old_locus_tag=VYA_14180 NZ_AP024165.1 Protein Homology CDS 1595351 1595623 . - 0 ID=cds-WP_221067563.1;Parent=gene-VA249_RS07690;Dbxref=Genbank:WP_221067563.1;Name=WP_221067563.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000414763.1;locus_tag=VA249_RS07690;product=acylphosphatase;protein_id=WP_221067563.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1595714 1597117 . + . ID=gene-VA249_RS07695;Name=VA249_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07695;old_locus_tag=VYA_14190 NZ_AP024165.1 Protein Homology CDS 1595714 1597117 . + 0 ID=cds-WP_221067564.1;Parent=gene-VA249_RS07695;Dbxref=Genbank:WP_221067564.1;Name=WP_221067564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019823210.1;locus_tag=VA249_RS07695;product=methyl-accepting chemotaxis protein;protein_id=WP_221067564.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1597288 1598481 . + . ID=gene-VA249_RS07700;Name=VA249_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07700;old_locus_tag=VYA_14200 NZ_AP024165.1 Protein Homology CDS 1597288 1598481 . + 0 ID=cds-WP_221067565.1;Parent=gene-VA249_RS07700;Dbxref=Genbank:WP_221067565.1;Name=WP_221067565.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020432932.1;locus_tag=VA249_RS07700;product=class I SAM-dependent methyltransferase;protein_id=WP_221067565.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1598567 1613548 . - . ID=gene-VA249_RS07705;Name=VA249_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07705;old_locus_tag=VYA_14210 NZ_AP024165.1 Protein Homology CDS 1598567 1613548 . - 0 ID=cds-WP_221067566.1;Parent=gene-VA249_RS07705;Dbxref=Genbank:WP_221067566.1;Name=WP_221067566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024909.2;locus_tag=VA249_RS07705;product=Ig-like domain-containing protein;protein_id=WP_221067566.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1613948 1615255 . + . ID=gene-VA249_RS07710;Name=VA249_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07710;old_locus_tag=VYA_14220 NZ_AP024165.1 Protein Homology CDS 1613948 1615255 . + 0 ID=cds-WP_221067567.1;Parent=gene-VA249_RS07710;Dbxref=Genbank:WP_221067567.1;Name=WP_221067567.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696936.1;locus_tag=VA249_RS07710;product=TolC family outer membrane protein;protein_id=WP_221067567.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1615258 1615878 . + . ID=gene-VA249_RS07715;Name=VA249_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07715;old_locus_tag=VYA_14230 NZ_AP024165.1 Protein Homology CDS 1615258 1615878 . + 0 ID=cds-WP_221067568.1;Parent=gene-VA249_RS07715;Dbxref=Genbank:WP_221067568.1;Name=WP_221067568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530956.1;locus_tag=VA249_RS07715;product=OmpA family protein;protein_id=WP_221067568.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1615990 1616343 . + . ID=gene-VA249_RS07720;Name=VA249_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07720;old_locus_tag=VYA_14240 NZ_AP024165.1 Protein Homology CDS 1615990 1616343 . + 0 ID=cds-WP_128810837.1;Parent=gene-VA249_RS07720;Dbxref=Genbank:WP_128810837.1;Name=WP_128810837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448080.1;locus_tag=VA249_RS07720;product=DUF2750 domain-containing protein;protein_id=WP_128810837.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1616548 1618515 . + . ID=gene-VA249_RS07725;Name=VA249_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07725;old_locus_tag=VYA_14250 NZ_AP024165.1 Protein Homology CDS 1616548 1618515 . + 0 ID=cds-WP_221067569.1;Parent=gene-VA249_RS07725;Dbxref=Genbank:WP_221067569.1;Name=WP_221067569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530959.1;locus_tag=VA249_RS07725;product=diguanylate cyclase;protein_id=WP_221067569.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1618472 1619170 . - . ID=gene-VA249_RS07730;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=VA249_RS07730;old_locus_tag=VYA_14260 NZ_AP024165.1 Protein Homology CDS 1618472 1619170 . - 0 ID=cds-WP_221067570.1;Parent=gene-VA249_RS07730;Dbxref=Genbank:WP_221067570.1;Name=WP_221067570.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451968.1;locus_tag=VA249_RS07730;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_221067570.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1619206 1619856 . - . ID=gene-VA249_RS07735;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=VA249_RS07735;old_locus_tag=VYA_14270 NZ_AP024165.1 Protein Homology CDS 1619206 1619856 . - 0 ID=cds-WP_164837247.1;Parent=gene-VA249_RS07735;Dbxref=Genbank:WP_164837247.1;Name=WP_164837247.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188077.1;locus_tag=VA249_RS07735;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_164837247.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1620022 1620831 . + . ID=gene-VA249_RS07740;Name=VA249_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07740;old_locus_tag=VYA_14280 NZ_AP024165.1 Protein Homology CDS 1620022 1620831 . + 0 ID=cds-WP_221067571.1;Parent=gene-VA249_RS07740;Dbxref=Genbank:WP_221067571.1;Name=WP_221067571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008224707.1;locus_tag=VA249_RS07740;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_221067571.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1620912 1622348 . - . ID=gene-VA249_RS07745;Name=VA249_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07745;old_locus_tag=VYA_14290 NZ_AP024165.1 Protein Homology CDS 1620912 1622348 . - 0 ID=cds-WP_221067572.1;Parent=gene-VA249_RS07745;Dbxref=Genbank:WP_221067572.1;Name=WP_221067572.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650649.1;locus_tag=VA249_RS07745;product=NUDIX domain-containing protein;protein_id=WP_221067572.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1622687 1623166 . - . ID=gene-VA249_RS07750;Name=VA249_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07750;old_locus_tag=VYA_14300 NZ_AP024165.1 Protein Homology CDS 1622687 1623166 . - 0 ID=cds-WP_221067573.1;Parent=gene-VA249_RS07750;Dbxref=Genbank:WP_221067573.1;Name=WP_221067573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005377290.1;locus_tag=VA249_RS07750;product=GNAT family N-acetyltransferase;protein_id=WP_221067573.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1623478 1625355 . - . ID=gene-VA249_RS07755;Name=VA249_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07755;old_locus_tag=VYA_14310 NZ_AP024165.1 Protein Homology CDS 1623478 1625355 . - 0 ID=cds-WP_221067574.1;Parent=gene-VA249_RS07755;Dbxref=Genbank:WP_221067574.1;Name=WP_221067574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296782.1;locus_tag=VA249_RS07755;product=propionyl-CoA synthetase;protein_id=WP_221067574.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1625411 1626598 . - . ID=gene-VA249_RS07760;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=VA249_RS07760;old_locus_tag=VYA_14320 NZ_AP024165.1 Protein Homology CDS 1625411 1626598 . - 0 ID=cds-WP_221067575.1;Parent=gene-VA249_RS07760;Dbxref=Genbank:WP_221067575.1;Name=WP_221067575.1;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819419.1;locus_tag=VA249_RS07760;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_221067575.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1626612 1629221 . - . ID=gene-VA249_RS07765;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=VA249_RS07765;old_locus_tag=VYA_14330 NZ_AP024165.1 Protein Homology CDS 1626612 1629221 . - 0 ID=cds-WP_221067576.1;Parent=gene-VA249_RS07765;Dbxref=Genbank:WP_221067576.1;Name=WP_221067576.1;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530983.1;locus_tag=VA249_RS07765;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_221067576.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1629333 1630475 . - . ID=gene-VA249_RS07770;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=VA249_RS07770;old_locus_tag=VYA_14340 NZ_AP024165.1 Protein Homology CDS 1629333 1630475 . - 0 ID=cds-WP_128810828.1;Parent=gene-VA249_RS07770;Dbxref=Genbank:WP_128810828.1;Name=WP_128810828.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819421.1;locus_tag=VA249_RS07770;product=2-methylcitrate synthase;protein_id=WP_128810828.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1630624 1631520 . - . ID=gene-VA249_RS07775;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=VA249_RS07775;old_locus_tag=VYA_14350 NZ_AP024165.1 Protein Homology CDS 1630624 1631520 . - 0 ID=cds-WP_221067577.1;Parent=gene-VA249_RS07775;Dbxref=Genbank:WP_221067577.1;Name=WP_221067577.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128057.1;locus_tag=VA249_RS07775;product=methylisocitrate lyase;protein_id=WP_221067577.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1631533 1632240 . - . ID=gene-VA249_RS07780;Name=VA249_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07780;old_locus_tag=VYA_14360 NZ_AP024165.1 Protein Homology CDS 1631533 1632240 . - 0 ID=cds-WP_128812272.1;Parent=gene-VA249_RS07780;Dbxref=Genbank:WP_128812272.1;Name=WP_128812272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426622.1;locus_tag=VA249_RS07780;product=GntR family transcriptional regulator;protein_id=WP_128812272.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1632513 1635646 . - . ID=gene-VA249_RS07785;Name=VA249_RS07785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS07785;old_locus_tag=VYA_14380;pseudo=true NZ_AP024165.1 Protein Homology CDS 1632513 1635646 . - 0 ID=cds-VA249_RS07785;Parent=gene-VA249_RS07785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188099.1;locus_tag=VA249_RS07785;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1636073 1636471 . - . ID=gene-VA249_RS07790;Name=VA249_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07790;old_locus_tag=VYA_14390 NZ_AP024165.1 Protein Homology CDS 1636073 1636471 . - 0 ID=cds-WP_221067578.1;Parent=gene-VA249_RS07790;Dbxref=Genbank:WP_221067578.1;Name=WP_221067578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010648681.1;locus_tag=VA249_RS07790;product=GFA family protein;protein_id=WP_221067578.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1636874 1637644 . + . ID=gene-VA249_RS07795;Name=VA249_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07795;old_locus_tag=VYA_14400 NZ_AP024165.1 Protein Homology CDS 1636874 1637644 . + 0 ID=cds-WP_128810825.1;Parent=gene-VA249_RS07795;Dbxref=Genbank:WP_128810825.1;Name=WP_128810825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442173.1;locus_tag=VA249_RS07795;product=sulfite exporter TauE/SafE family protein;protein_id=WP_128810825.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1637723 1638694 . - . ID=gene-VA249_RS07800;Name=VA249_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07800;old_locus_tag=VYA_14410 NZ_AP024165.1 Protein Homology CDS 1637723 1638694 . - 0 ID=cds-WP_221067579.1;Parent=gene-VA249_RS07800;Dbxref=Genbank:WP_221067579.1;Name=WP_221067579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531005.1;locus_tag=VA249_RS07800;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_221067579.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1638938 1641985 . - . ID=gene-VA249_RS07805;Name=VA249_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07805;old_locus_tag=VYA_14420 NZ_AP024165.1 Protein Homology CDS 1638938 1641985 . - 0 ID=cds-WP_225927088.1;Parent=gene-VA249_RS07805;Dbxref=Genbank:WP_225927088.1;Name=WP_225927088.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188101.1;locus_tag=VA249_RS07805;product=efflux RND transporter permease subunit;protein_id=WP_225927088.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1641982 1642752 . - . ID=gene-VA249_RS07810;Name=VA249_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07810;old_locus_tag=VYA_14430 NZ_AP024165.1 Protein Homology CDS 1641982 1642752 . - 0 ID=cds-WP_221067580.1;Parent=gene-VA249_RS07810;Dbxref=Genbank:WP_221067580.1;Name=WP_221067580.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188102.1;locus_tag=VA249_RS07810;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221067580.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1643010 1644530 . - . ID=gene-VA249_RS07815;Name=VA249_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07815;old_locus_tag=VYA_14440 NZ_AP024165.1 Protein Homology CDS 1643010 1644530 . - 0 ID=cds-WP_221067581.1;Parent=gene-VA249_RS07815;Dbxref=Genbank:WP_221067581.1;Name=WP_221067581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017099114.1;locus_tag=VA249_RS07815;product=aldehyde dehydrogenase;protein_id=WP_221067581.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1644769 1646541 . + . ID=gene-VA249_RS07820;Name=VA249_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07820;old_locus_tag=VYA_14450 NZ_AP024165.1 Protein Homology CDS 1644769 1646541 . + 0 ID=cds-WP_221067582.1;Parent=gene-VA249_RS07820;Dbxref=Genbank:WP_221067582.1;Name=WP_221067582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128073.1;locus_tag=VA249_RS07820;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_221067582.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1646708 1648144 . - . ID=gene-VA249_RS07825;Name=VA249_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07825;old_locus_tag=VYA_14460 NZ_AP024165.1 Protein Homology CDS 1646708 1648144 . - 0 ID=cds-WP_221067583.1-6;Parent=gene-VA249_RS07825;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS07825;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1648360 1648497 . - . ID=gene-VA249_RS07830;Name=VA249_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07830;old_locus_tag=VYA_14470 NZ_AP024165.1 Protein Homology CDS 1648360 1648497 . - 0 ID=cds-WP_164837178.1;Parent=gene-VA249_RS07830;Dbxref=Genbank:WP_164837178.1;Name=WP_164837178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005517461.1;locus_tag=VA249_RS07830;product=hypothetical protein;protein_id=WP_164837178.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1648831 1649742 . + . ID=gene-VA249_RS07835;Name=VA249_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07835;old_locus_tag=VYA_14480 NZ_AP024165.1 Protein Homology CDS 1648831 1649742 . + 0 ID=cds-WP_221067584.1;Parent=gene-VA249_RS07835;Dbxref=Genbank:WP_221067584.1;Name=WP_221067584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697452.1;locus_tag=VA249_RS07835;product=LysR family transcriptional regulator;protein_id=WP_221067584.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1649913 1651349 . - . ID=gene-VA249_RS07840;Name=VA249_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07840;old_locus_tag=VYA_14490 NZ_AP024165.1 Protein Homology CDS 1649913 1651349 . - 0 ID=cds-WP_221067583.1-7;Parent=gene-VA249_RS07840;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS07840;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1651461 1652981 . - . ID=gene-VA249_RS07845;Name=VA249_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07845;old_locus_tag=VYA_14500 NZ_AP024165.1 Protein Homology CDS 1651461 1652981 . - 0 ID=cds-WP_221067585.1;Parent=gene-VA249_RS07845;Dbxref=Genbank:WP_221067585.1;Name=WP_221067585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448327.1;locus_tag=VA249_RS07845;product=DUF1254 domain-containing protein;protein_id=WP_221067585.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1653253 1653459 . + . ID=gene-VA249_RS07850;Name=VA249_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07850;old_locus_tag=VYA_14510 NZ_AP024165.1 Protein Homology CDS 1653253 1653459 . + 0 ID=cds-WP_221067586.1;Parent=gene-VA249_RS07850;Dbxref=Genbank:WP_221067586.1;Name=WP_221067586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446094.1;locus_tag=VA249_RS07850;product=hypothetical protein;protein_id=WP_221067586.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1653546 1654994 . - . ID=gene-VA249_RS07855;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=VA249_RS07855;old_locus_tag=VYA_14520 NZ_AP024165.1 Protein Homology CDS 1653546 1654994 . - 0 ID=cds-WP_221067587.1;Parent=gene-VA249_RS07855;Dbxref=Genbank:WP_221067587.1;Name=WP_221067587.1;Ontology_term=GO:0006098,GO:0004616,GO:0005737;gbkey=CDS;gene=gnd;go_component=cytoplasm|0005737||IEA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017080794.1;locus_tag=VA249_RS07855;product=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;protein_id=WP_221067587.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1655035 1655751 . - . ID=gene-VA249_RS07860;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=VA249_RS07860;old_locus_tag=VYA_14530 NZ_AP024165.1 Protein Homology CDS 1655035 1655751 . - 0 ID=cds-WP_221067588.1;Parent=gene-VA249_RS07860;Dbxref=Genbank:WP_221067588.1;Name=WP_221067588.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296825.1;locus_tag=VA249_RS07860;product=6-phosphogluconolactonase;protein_id=WP_221067588.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1655748 1657250 . - . ID=gene-VA249_RS07865;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=VA249_RS07865;old_locus_tag=VYA_14540 NZ_AP024165.1 Protein Homology CDS 1655748 1657250 . - 0 ID=cds-WP_221069885.1;Parent=gene-VA249_RS07865;Dbxref=Genbank:WP_221069885.1;Name=WP_221069885.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332475.1;locus_tag=VA249_RS07865;product=glucose-6-phosphate dehydrogenase;protein_id=WP_221069885.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1658145 1658372 . + . ID=gene-VA249_RS07870;Name=VA249_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07870;old_locus_tag=VYA_14550 NZ_AP024165.1 Protein Homology CDS 1658145 1658372 . + 0 ID=cds-WP_128810803.1;Parent=gene-VA249_RS07870;Dbxref=Genbank:WP_128810803.1;Name=WP_128810803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017055236.1;locus_tag=VA249_RS07870;product=hypothetical protein;protein_id=WP_128810803.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1658511 1659902 . + . ID=gene-VA249_RS07875;Name=VA249_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07875;old_locus_tag=VYA_14560 NZ_AP024165.1 Protein Homology CDS 1658511 1659902 . + 0 ID=cds-WP_221067589.1;Parent=gene-VA249_RS07875;Dbxref=Genbank:WP_221067589.1;Name=WP_221067589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197496.1;locus_tag=VA249_RS07875;product=TolC family protein;protein_id=WP_221067589.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1659906 1660886 . + . ID=gene-VA249_RS07880;Name=VA249_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07880;old_locus_tag=VYA_14570 NZ_AP024165.1 Protein Homology CDS 1659906 1660886 . + 0 ID=cds-WP_221067590.1;Parent=gene-VA249_RS07880;Dbxref=Genbank:WP_221067590.1;Name=WP_221067590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448351.1;locus_tag=VA249_RS07880;product=biotin/lipoyl-binding protein;protein_id=WP_221067590.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1660905 1662092 . + . ID=gene-VA249_RS07885;Name=VA249_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07885;old_locus_tag=VYA_14580 NZ_AP024165.1 Protein Homology CDS 1660905 1662092 . + 0 ID=cds-WP_221067591.1;Parent=gene-VA249_RS07885;Dbxref=Genbank:WP_221067591.1;Name=WP_221067591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128085.1;locus_tag=VA249_RS07885;product=ABC-2 transporter permease;protein_id=WP_221067591.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1662089 1663240 . + . ID=gene-VA249_RS07890;Name=VA249_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07890;old_locus_tag=VYA_14590 NZ_AP024165.1 Protein Homology CDS 1662089 1663240 . + 0 ID=cds-WP_221067592.1;Parent=gene-VA249_RS07890;Dbxref=Genbank:WP_221067592.1;Name=WP_221067592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448355.1;locus_tag=VA249_RS07890;product=ABC transporter permease;protein_id=WP_221067592.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1663295 1664191 . - . ID=gene-VA249_RS07895;Name=VA249_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07895;old_locus_tag=VYA_14600 NZ_AP024165.1 Protein Homology CDS 1663295 1664191 . - 0 ID=cds-WP_221067593.1;Parent=gene-VA249_RS07895;Dbxref=Genbank:WP_221067593.1;Name=WP_221067593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448373.1;locus_tag=VA249_RS07895;product=SDR family oxidoreductase;protein_id=WP_221067593.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1664400 1665284 . + . ID=gene-VA249_RS07900;Name=VA249_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07900;old_locus_tag=VYA_14610 NZ_AP024165.1 Protein Homology CDS 1664400 1665284 . + 0 ID=cds-WP_221067594.1;Parent=gene-VA249_RS07900;Dbxref=Genbank:WP_221067594.1;Name=WP_221067594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008080797.1;locus_tag=VA249_RS07900;product=LysR family transcriptional regulator;protein_id=WP_221067594.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1665344 1667218 . - . ID=gene-VA249_RS07905;Name=VA249_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07905;old_locus_tag=VYA_14620 NZ_AP024165.1 Protein Homology CDS 1665344 1667218 . - 0 ID=cds-WP_225927089.1;Parent=gene-VA249_RS07905;Dbxref=Genbank:WP_225927089.1;Name=WP_225927089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818075.1;locus_tag=VA249_RS07905;product=hypothetical protein;protein_id=WP_225927089.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1667387 1668811 . - . ID=gene-VA249_RS07910;Name=VA249_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07910;old_locus_tag=VYA_14630 NZ_AP024165.1 Protein Homology CDS 1667387 1668811 . - 0 ID=cds-WP_221067595.1;Parent=gene-VA249_RS07910;Dbxref=Genbank:WP_221067595.1;Name=WP_221067595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197617.1;locus_tag=VA249_RS07910;product=aspartate kinase;protein_id=WP_221067595.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1668886 1669272 . - . ID=gene-VA249_RS07915;Name=VA249_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07915;old_locus_tag=VYA_14640 NZ_AP024165.1 Protein Homology CDS 1668886 1669272 . - 0 ID=cds-WP_128810797.1;Parent=gene-VA249_RS07915;Dbxref=Genbank:WP_128810797.1;Name=WP_128810797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016962415.1;locus_tag=VA249_RS07915;product=ectoine synthase;protein_id=WP_128810797.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1669286 1670551 . - . ID=gene-VA249_RS07920;Name=ectB;gbkey=Gene;gene=ectB;gene_biotype=protein_coding;locus_tag=VA249_RS07920;old_locus_tag=VYA_14650 NZ_AP024165.1 Protein Homology CDS 1669286 1670551 . - 0 ID=cds-WP_221067596.1;Parent=gene-VA249_RS07920;Dbxref=Genbank:WP_221067596.1;Name=WP_221067596.1;Ontology_term=GO:0045303;gbkey=CDS;gene=ectB;go_function=diaminobutyrate-2-oxoglutarate transaminase activity|0045303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019824504.1;locus_tag=VA249_RS07920;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_221067596.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1670588 1671121 . - . ID=gene-VA249_RS07925;Name=ectA;gbkey=Gene;gene=ectA;gene_biotype=protein_coding;locus_tag=VA249_RS07925;old_locus_tag=VYA_14660 NZ_AP024165.1 Protein Homology CDS 1670588 1671121 . - 0 ID=cds-WP_221067597.1;Parent=gene-VA249_RS07925;Dbxref=Genbank:WP_221067597.1;Name=WP_221067597.1;Ontology_term=GO:0019491,GO:0033816;gbkey=CDS;gene=ectA;go_function=diaminobutyrate acetyltransferase activity|0033816||IEA;go_process=ectoine biosynthetic process|0019491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431975.1;locus_tag=VA249_RS07925;product=diaminobutyrate acetyltransferase;protein_id=WP_221067597.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1671437 1673101 . - . ID=gene-VA249_RS07930;Name=VA249_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07930;old_locus_tag=VYA_14670 NZ_AP024165.1 Protein Homology CDS 1671437 1673101 . - 0 ID=cds-WP_221067598.1;Parent=gene-VA249_RS07930;Dbxref=Genbank:WP_221067598.1;Name=WP_221067598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433884.1;locus_tag=VA249_RS07930;product=BCCT family transporter;protein_id=WP_221067598.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1673293 1674039 . - . ID=gene-VA249_RS07935;Name=VA249_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07935;old_locus_tag=VYA_14680 NZ_AP024165.1 Protein Homology CDS 1673293 1674039 . - 0 ID=cds-WP_221067599.1;Parent=gene-VA249_RS07935;Dbxref=Genbank:WP_221067599.1;Name=WP_221067599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820938.1;locus_tag=VA249_RS07935;product=3'-5' exonuclease;protein_id=WP_221067599.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1674039 1675919 . - . ID=gene-VA249_RS07940;Name=VA249_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07940;old_locus_tag=VYA_14690 NZ_AP024165.1 Protein Homology CDS 1674039 1675919 . - 0 ID=cds-WP_221067600.1;Parent=gene-VA249_RS07940;Dbxref=Genbank:WP_221067600.1;Name=WP_221067600.1;Ontology_term=GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009703074.1;locus_tag=VA249_RS07940;product=DUF294 nucleotidyltransferase-like domain-containing protein;protein_id=WP_221067600.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1676335 1677522 . + . ID=gene-VA249_RS07945;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=VA249_RS07945;old_locus_tag=VYA_14700 NZ_AP024165.1 Protein Homology CDS 1676335 1677522 . + 0 ID=cds-WP_221067601.1;Parent=gene-VA249_RS07945;Dbxref=Genbank:WP_221067601.1;Name=WP_221067601.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013867972.1;locus_tag=VA249_RS07945;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_221067601.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1677527 1678621 . + . ID=gene-VA249_RS07950;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=VA249_RS07950;old_locus_tag=VYA_14710 NZ_AP024165.1 Protein Homology CDS 1677527 1678621 . + 0 ID=cds-WP_221067602.1;Parent=gene-VA249_RS07950;Dbxref=Genbank:WP_221067602.1;Name=WP_221067602.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017630081.1;locus_tag=VA249_RS07950;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_221067602.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1678614 1679621 . + . ID=gene-VA249_RS07955;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=VA249_RS07955;old_locus_tag=VYA_14720 NZ_AP024165.1 Protein Homology CDS 1678614 1679621 . + 0 ID=cds-WP_128810789.1;Parent=gene-VA249_RS07955;Dbxref=Genbank:WP_128810789.1;Name=WP_128810789.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009846457.1;locus_tag=VA249_RS07955;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_128810789.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1679847 1681250 . + . ID=gene-VA249_RS07960;Name=VA249_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07960;old_locus_tag=VYA_14730 NZ_AP024165.1 Protein Homology CDS 1679847 1681250 . + 0 ID=cds-WP_221067603.1;Parent=gene-VA249_RS07960;Dbxref=Genbank:WP_221067603.1;Name=WP_221067603.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016789848.1;locus_tag=VA249_RS07960;product=MATE family efflux transporter;protein_id=WP_221067603.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1681376 1681855 . - . ID=gene-VA249_RS07965;Name=VA249_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07965;old_locus_tag=VYA_14740 NZ_AP024165.1 Protein Homology CDS 1681376 1681855 . - 0 ID=cds-WP_221069897.1;Parent=gene-VA249_RS07965;Dbxref=Genbank:WP_221069897.1;Name=WP_221069897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830145.1;locus_tag=VA249_RS07965;product=outer membrane beta-barrel protein;protein_id=WP_221069897.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1682067 1685903 . - . ID=gene-VA249_RS07970;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=VA249_RS07970;old_locus_tag=VYA_14750 NZ_AP024165.1 Protein Homology CDS 1682067 1685903 . - 0 ID=cds-WP_242598083.1;Parent=gene-VA249_RS07970;Dbxref=Genbank:WP_242598083.1;Name=WP_242598083.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451856.1;locus_tag=VA249_RS07970;product=ATP-dependent RNA helicase HrpA;protein_id=WP_242598083.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1686250 1686834 . + . ID=gene-VA249_RS07975;Name=VA249_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07975;old_locus_tag=VYA_14760 NZ_AP024165.1 Protein Homology CDS 1686250 1686834 . + 0 ID=cds-WP_221067605.1;Parent=gene-VA249_RS07975;Dbxref=Genbank:WP_221067605.1;Name=WP_221067605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741601.1;locus_tag=VA249_RS07975;product=FMN-dependent NADH-azoreductase;protein_id=WP_221067605.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1687172 1689517 . + . ID=gene-VA249_RS07980;Name=VA249_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07980;old_locus_tag=VYA_14770 NZ_AP024165.1 Protein Homology CDS 1687172 1689517 . + 0 ID=cds-WP_221067606.1;Parent=gene-VA249_RS07980;Dbxref=Genbank:WP_221067606.1;Name=WP_221067606.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009387542.1;locus_tag=VA249_RS07980;product=glycosyl hydrolase family 18 protein;protein_id=WP_221067606.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1689625 1690833 . - . ID=gene-VA249_RS07985;Name=VA249_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07985;old_locus_tag=VYA_14780 NZ_AP024165.1 Protein Homology CDS 1689625 1690833 . - 0 ID=cds-WP_225927124.1;Parent=gene-VA249_RS07985;Dbxref=Genbank:WP_225927124.1;Name=WP_225927124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080194.1;locus_tag=VA249_RS07985;product=MipA/OmpV family protein;protein_id=WP_225927124.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1691200 1691550 . + . ID=gene-VA249_RS07990;Name=VA249_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07990;old_locus_tag=VYA_14790 NZ_AP024165.1 Protein Homology CDS 1691200 1691550 . + 0 ID=cds-WP_221067608.1;Parent=gene-VA249_RS07990;Dbxref=Genbank:WP_221067608.1;Name=WP_221067608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005495141.1;locus_tag=VA249_RS07990;product=hypothetical protein;protein_id=WP_221067608.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1691560 1693500 . + . ID=gene-VA249_RS07995;Name=VA249_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS07995;old_locus_tag=VYA_14800 NZ_AP024165.1 Protein Homology CDS 1691560 1693500 . + 0 ID=cds-WP_221067609.1;Parent=gene-VA249_RS07995;Dbxref=Genbank:WP_221067609.1;Name=WP_221067609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704265.1;locus_tag=VA249_RS07995;product=alkaline phosphatase family protein;protein_id=WP_221067609.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1693679 1694122 . + . ID=gene-VA249_RS08000;Name=VA249_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08000;old_locus_tag=VYA_14810 NZ_AP024165.1 Protein Homology CDS 1693679 1694122 . + 0 ID=cds-WP_128810782.1;Parent=gene-VA249_RS08000;Dbxref=Genbank:WP_128810782.1;Name=WP_128810782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451837.1;locus_tag=VA249_RS08000;product=TerB family tellurite resistance protein;protein_id=WP_128810782.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1694292 1696697 . - . ID=gene-VA249_RS08005;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=VA249_RS08005;old_locus_tag=VYA_14820 NZ_AP024165.1 Protein Homology CDS 1694292 1696697 . - 0 ID=cds-WP_221067610.1;Parent=gene-VA249_RS08005;Dbxref=Genbank:WP_221067610.1;Name=WP_221067610.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013856622.1;locus_tag=VA249_RS08005;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_221067610.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1696716 1697699 . - . ID=gene-VA249_RS08010;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=VA249_RS08010;old_locus_tag=VYA_14830 NZ_AP024165.1 Protein Homology CDS 1696716 1697699 . - 0 ID=cds-WP_128810780.1;Parent=gene-VA249_RS08010;Dbxref=Genbank:WP_128810780.1;Name=WP_128810780.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004395419.1;locus_tag=VA249_RS08010;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_128810780.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1698062 1698871 . - . ID=gene-VA249_RS08015;Name=VA249_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08015;old_locus_tag=VYA_14840 NZ_AP024165.1 Protein Homology CDS 1698062 1698871 . - 0 ID=cds-WP_221067611.1;Parent=gene-VA249_RS08015;Dbxref=Genbank:WP_221067611.1;Name=WP_221067611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705881.1;locus_tag=VA249_RS08015;product=helix-turn-helix domain-containing protein;protein_id=WP_221067611.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1699244 1699558 . - . ID=gene-VA249_RS08020;Name=VA249_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08020;old_locus_tag=VYA_14850 NZ_AP024165.1 Protein Homology CDS 1699244 1699558 . - 0 ID=cds-WP_221067612.1;Parent=gene-VA249_RS08020;Dbxref=Genbank:WP_221067612.1;Name=WP_221067612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443150.1;locus_tag=VA249_RS08020;product=heavy metal-binding domain-containing protein;protein_id=WP_221067612.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1699844 1700197 . - . ID=gene-VA249_RS08025;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=VA249_RS08025;old_locus_tag=VYA_14860 NZ_AP024165.1 Protein Homology CDS 1699844 1700197 . - 0 ID=cds-WP_004727974.1;Parent=gene-VA249_RS08025;Dbxref=Genbank:WP_004727974.1;Name=WP_004727974.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733517.1;locus_tag=VA249_RS08025;product=50S ribosomal protein L20;protein_id=WP_004727974.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1700238 1700432 . - . ID=gene-VA249_RS08030;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=VA249_RS08030;old_locus_tag=VYA_14870 NZ_AP024165.1 Protein Homology CDS 1700238 1700432 . - 0 ID=cds-WP_128810778.1;Parent=gene-VA249_RS08030;Dbxref=Genbank:WP_128810778.1;Name=WP_128810778.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012550352.1;locus_tag=VA249_RS08030;product=50S ribosomal protein L35;protein_id=WP_128810778.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1700550 1701050 . - . ID=gene-VA249_RS08035;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=VA249_RS08035;old_locus_tag=VYA_14880 NZ_AP024165.1 Protein Homology CDS 1700550 1701050 . - 0 ID=cds-WP_256997334.1;Parent=gene-VA249_RS08035;Dbxref=Genbank:WP_256997334.1;Name=WP_256997334.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012607480.1;locus_tag=VA249_RS08035;product=translation initiation factor IF-3;protein_id=WP_256997334.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1701105 1703033 . - . ID=gene-VA249_RS08040;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=VA249_RS08040;old_locus_tag=VYA_14890 NZ_AP024165.1 Protein Homology CDS 1701105 1703033 . - 0 ID=cds-WP_099078768.1;Parent=gene-VA249_RS08040;Dbxref=Genbank:WP_099078768.1;Name=WP_099078768.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010319593.1;locus_tag=VA249_RS08040;product=threonine--tRNA ligase;protein_id=WP_099078768.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1703660 1704328 . + . ID=gene-VA249_RS08045;Name=VA249_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08045;old_locus_tag=VYA_14900 NZ_AP024165.1 Protein Homology CDS 1703660 1704328 . + 0 ID=cds-WP_221067613.1;Parent=gene-VA249_RS08045;Dbxref=Genbank:WP_221067613.1;Name=WP_221067613.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=VA249_RS08045;product=winged helix-turn-helix domain-containing protein;protein_id=WP_221067613.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1705298 1705534 . + . ID=gene-VA249_RS08050;Name=VA249_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08050;old_locus_tag=VYA_14920 NZ_AP024165.1 GeneMarkS-2+ CDS 1705298 1705534 . + 0 ID=cds-WP_221067614.1;Parent=gene-VA249_RS08050;Dbxref=Genbank:WP_221067614.1;Name=WP_221067614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08050;product=hypothetical protein;protein_id=WP_221067614.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1705602 1711916 . - . ID=gene-VA249_RS08055;Name=VA249_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08055;old_locus_tag=VYA_14930 NZ_AP024165.1 Protein Homology CDS 1705602 1711916 . - 0 ID=cds-WP_221067615.1;Parent=gene-VA249_RS08055;Dbxref=Genbank:WP_221067615.1;Name=WP_221067615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449924.1;locus_tag=VA249_RS08055;product=SslE/AcfD family lipoprotein zinc metalloprotease;protein_id=WP_221067615.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1712273 1712953 . + . ID=gene-VA249_RS08060;Name=VA249_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08060;old_locus_tag=VYA_14940 NZ_AP024165.1 Protein Homology CDS 1712273 1712953 . + 0 ID=cds-WP_221067616.1;Parent=gene-VA249_RS08060;Dbxref=Genbank:WP_221067616.1;Name=WP_221067616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=VA249_RS08060;product=EAL domain-containing protein;protein_id=WP_221067616.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1713577 1714380 . - . ID=gene-VA249_RS08065;Name=VA249_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08065;old_locus_tag=VYA_14960 NZ_AP024165.1 Protein Homology CDS 1713577 1714380 . - 0 ID=cds-WP_221067617.1;Parent=gene-VA249_RS08065;Dbxref=Genbank:WP_221067617.1;Name=WP_221067617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=VA249_RS08065;product=AraC family transcriptional regulator;protein_id=WP_221067617.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1714593 1714967 . + . ID=gene-VA249_RS08070;Name=VA249_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08070;old_locus_tag=VYA_14970 NZ_AP024165.1 GeneMarkS-2+ CDS 1714593 1714967 . + 0 ID=cds-WP_221067618.1;Parent=gene-VA249_RS08070;Dbxref=Genbank:WP_221067618.1;Name=WP_221067618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08070;product=hypothetical protein;protein_id=WP_221067618.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1715184 1717868 . - . ID=gene-VA249_RS08075;Name=VA249_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08075;old_locus_tag=VYA_14980 NZ_AP024165.1 GeneMarkS-2+ CDS 1715184 1717868 . - 0 ID=cds-WP_221067619.1;Parent=gene-VA249_RS08075;Dbxref=Genbank:WP_221067619.1;Name=WP_221067619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08075;product=hypothetical protein;protein_id=WP_221067619.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1718041 1720761 . - . ID=gene-VA249_RS08080;Name=VA249_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08080;old_locus_tag=VYA_14990 NZ_AP024165.1 GeneMarkS-2+ CDS 1718041 1720761 . - 0 ID=cds-WP_221067620.1;Parent=gene-VA249_RS08080;Dbxref=Genbank:WP_221067620.1;Name=WP_221067620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08080;product=hypothetical protein;protein_id=WP_221067620.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1720922 1723591 . - . ID=gene-VA249_RS08085;Name=VA249_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08085;old_locus_tag=VYA_15000 NZ_AP024165.1 GeneMarkS-2+ CDS 1720922 1723591 . - 0 ID=cds-WP_221067621.1;Parent=gene-VA249_RS08085;Dbxref=Genbank:WP_221067621.1;Name=WP_221067621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08085;product=hypothetical protein;protein_id=WP_221067621.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1724200 1726701 . - . ID=gene-VA249_RS08090;Name=VA249_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08090;old_locus_tag=VYA_15010 NZ_AP024165.1 GeneMarkS-2+ CDS 1724200 1726701 . - 0 ID=cds-WP_221067622.1;Parent=gene-VA249_RS08090;Dbxref=Genbank:WP_221067622.1;Name=WP_221067622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08090;product=hypothetical protein;protein_id=WP_221067622.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1727442 1728368 . - . ID=gene-VA249_RS08095;Name=VA249_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08095;old_locus_tag=VYA_15030 NZ_AP024165.1 Protein Homology CDS 1727442 1728368 . - 0 ID=cds-WP_221067623.1;Parent=gene-VA249_RS08095;Dbxref=Genbank:WP_221067623.1;Name=WP_221067623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=VA249_RS08095;product=OmpA family protein;protein_id=WP_221067623.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1728387 1729454 . - . ID=gene-VA249_RS08100;Name=VA249_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08100;old_locus_tag=VYA_15040 NZ_AP024165.1 GeneMarkS-2+ CDS 1728387 1729454 . - 0 ID=cds-WP_221067624.1;Parent=gene-VA249_RS08100;Dbxref=Genbank:WP_221067624.1;Name=WP_221067624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08100;product=hypothetical protein;protein_id=WP_221067624.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1729464 1730189 . - . ID=gene-VA249_RS08105;Name=VA249_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08105;old_locus_tag=VYA_15050 NZ_AP024165.1 GeneMarkS-2+ CDS 1729464 1730189 . - 0 ID=cds-WP_221067625.1;Parent=gene-VA249_RS08105;Dbxref=Genbank:WP_221067625.1;Name=WP_221067625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08105;product=hypothetical protein;protein_id=WP_221067625.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1730190 1732892 . - . ID=gene-VA249_RS08110;Name=VA249_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08110;old_locus_tag=VYA_15060 NZ_AP024165.1 Protein Homology CDS 1730190 1732892 . - 0 ID=cds-WP_221067626.1;Parent=gene-VA249_RS08110;Dbxref=Genbank:WP_221067626.1;Name=WP_221067626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028277.2;locus_tag=VA249_RS08110;product=TcfC E-set like domain-containing protein;protein_id=WP_221067626.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1732889 1733395 . - . ID=gene-VA249_RS08115;Name=VA249_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08115;old_locus_tag=VYA_15070 NZ_AP024165.1 GeneMarkS-2+ CDS 1732889 1733395 . - 0 ID=cds-WP_221067627.1;Parent=gene-VA249_RS08115;Dbxref=Genbank:WP_221067627.1;Name=WP_221067627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08115;product=hypothetical protein;protein_id=WP_221067627.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1733479 1734024 . - . ID=gene-VA249_RS08120;Name=VA249_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08120;old_locus_tag=VYA_15080 NZ_AP024165.1 GeneMarkS-2+ CDS 1733479 1734024 . - 0 ID=cds-WP_221067628.1;Parent=gene-VA249_RS08120;Dbxref=Genbank:WP_221067628.1;Name=WP_221067628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08120;product=hypothetical protein;protein_id=WP_221067628.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1734410 1735825 . - . ID=gene-VA249_RS08125;Name=VA249_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08125;old_locus_tag=VYA_15090 NZ_AP024165.1 Protein Homology CDS 1734410 1735825 . - 0 ID=cds-WP_221067629.1;Parent=gene-VA249_RS08125;Dbxref=Genbank:WP_221067629.1;Name=WP_221067629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=VA249_RS08125;product=GGDEF domain-containing protein;protein_id=WP_221067629.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1735965 1737146 . - . ID=gene-VA249_RS08130;Name=VA249_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08130;old_locus_tag=VYA_15100 NZ_AP024165.1 Protein Homology CDS 1735965 1737146 . - 0 ID=cds-WP_221067630.1;Parent=gene-VA249_RS08130;Dbxref=Genbank:WP_221067630.1;Name=WP_221067630.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: protein motif:HMM:NF012656.2;locus_tag=VA249_RS08130;product=acyl-CoA dehydrogenase family protein;protein_id=WP_221067630.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1737163 1738395 . - . ID=gene-VA249_RS08135;Name=VA249_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08135;old_locus_tag=VYA_15110 NZ_AP024165.1 Protein Homology CDS 1737163 1738395 . - 0 ID=cds-WP_221067631.1;Parent=gene-VA249_RS08135;Dbxref=Genbank:WP_221067631.1;Name=WP_221067631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012656.2;locus_tag=VA249_RS08135;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WP_221067631.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1738756 1739496 . - . ID=gene-VA249_RS08140;Name=VA249_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08140;old_locus_tag=VYA_15120 NZ_AP024165.1 Protein Homology CDS 1738756 1739496 . - 0 ID=cds-WP_221067632.1;Parent=gene-VA249_RS08140;Dbxref=Genbank:WP_221067632.1;Name=WP_221067632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150503.1;locus_tag=VA249_RS08140;product=sporulation protein;protein_id=WP_221067632.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1739692 1740399 . + . ID=gene-VA249_RS08145;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=VA249_RS08145;old_locus_tag=VYA_15130 NZ_AP024165.1 Protein Homology CDS 1739692 1740399 . + 0 ID=cds-WP_221067633.1;Parent=gene-VA249_RS08145;Dbxref=Genbank:WP_221067633.1;Name=WP_221067633.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428069.1;locus_tag=VA249_RS08145;product=histidine utilization repressor;protein_id=WP_221067633.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1740519 1741769 . + . ID=gene-VA249_RS08150;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=VA249_RS08150;old_locus_tag=VYA_15140 NZ_AP024165.1 Protein Homology CDS 1740519 1741769 . + 0 ID=cds-WP_221067634.1;Parent=gene-VA249_RS08150;Dbxref=Genbank:WP_221067634.1;Name=WP_221067634.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634852.1;locus_tag=VA249_RS08150;product=imidazolonepropionase;protein_id=WP_221067634.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1741771 1742781 . + . ID=gene-VA249_RS08155;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=VA249_RS08155;old_locus_tag=VYA_15150 NZ_AP024165.1 Protein Homology CDS 1741771 1742781 . + 0 ID=cds-WP_221067635.1;Parent=gene-VA249_RS08155;Dbxref=Genbank:WP_221067635.1;Name=WP_221067635.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841908.1;locus_tag=VA249_RS08155;product=formimidoylglutamase;protein_id=WP_221067635.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1742839 1744536 . + . ID=gene-VA249_RS08160;Name=VA249_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08160;old_locus_tag=VYA_15160 NZ_AP024165.1 Protein Homology CDS 1742839 1744536 . + 0 ID=cds-WP_221067636.1;Parent=gene-VA249_RS08160;Dbxref=Genbank:WP_221067636.1;Name=WP_221067636.1;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150506.1;locus_tag=VA249_RS08160;product=urocanate hydratase;protein_id=WP_221067636.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1744548 1746083 . + . ID=gene-VA249_RS08165;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=VA249_RS08165;old_locus_tag=VYA_15170 NZ_AP024165.1 Protein Homology CDS 1744548 1746083 . + 0 ID=cds-WP_221067637.1;Parent=gene-VA249_RS08165;Dbxref=Genbank:WP_221067637.1;Name=WP_221067637.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697346.1;locus_tag=VA249_RS08165;product=histidine ammonia-lyase;protein_id=WP_221067637.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1746433 1747158 . + . ID=gene-VA249_RS08170;Name=VA249_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08170;old_locus_tag=VYA_15180 NZ_AP024165.1 Protein Homology CDS 1746433 1747158 . + 0 ID=cds-WP_221067638.1;Parent=gene-VA249_RS08170;Dbxref=Genbank:WP_221067638.1;Name=WP_221067638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733426.1;locus_tag=VA249_RS08170;product=DUF3581 family protein;protein_id=WP_221067638.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1747234 1747695 . - . ID=gene-VA249_RS08175;Name=VA249_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08175;old_locus_tag=VYA_15190 NZ_AP024165.1 Protein Homology CDS 1747234 1747695 . - 0 ID=cds-WP_128810733.1;Parent=gene-VA249_RS08175;Dbxref=Genbank:WP_128810733.1;Name=WP_128810733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533479.1;locus_tag=VA249_RS08175;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_128810733.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1747787 1750822 . - . ID=gene-VA249_RS08180;Name=VA249_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08180;old_locus_tag=VYA_15200 NZ_AP024165.1 Protein Homology CDS 1747787 1750822 . - 0 ID=cds-WP_221067639.1;Parent=gene-VA249_RS08180;Dbxref=Genbank:WP_221067639.1;Name=WP_221067639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231600.1;locus_tag=VA249_RS08180;product=FAD-binding oxidoreductase;protein_id=WP_221067639.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1751077 1751757 . + . ID=gene-VA249_RS08185;Name=VA249_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08185;old_locus_tag=VYA_15210 NZ_AP024165.1 Protein Homology CDS 1751077 1751757 . + 0 ID=cds-WP_211916463.1;Parent=gene-VA249_RS08185;Dbxref=Genbank:WP_211916463.1;Name=WP_211916463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742116.1;locus_tag=VA249_RS08185;product=DUF3334 family protein;protein_id=WP_211916463.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1751910 1752611 . + . ID=gene-VA249_RS08190;Name=VA249_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08190;old_locus_tag=VYA_15220 NZ_AP024165.1 Protein Homology CDS 1751910 1752611 . + 0 ID=cds-WP_211916462.1;Parent=gene-VA249_RS08190;Dbxref=Genbank:WP_211916462.1;Name=WP_211916462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462644.1;locus_tag=VA249_RS08190;product=DUF2786 domain-containing protein;protein_id=WP_211916462.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1752763 1753431 . + . ID=gene-VA249_RS08195;Name=VA249_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08195;old_locus_tag=VYA_15230 NZ_AP024165.1 Protein Homology CDS 1752763 1753431 . + 0 ID=cds-WP_128810729.1;Parent=gene-VA249_RS08195;Dbxref=Genbank:WP_128810729.1;Name=WP_128810729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001927630.1;locus_tag=VA249_RS08195;product=OmpA family protein;protein_id=WP_128810729.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1753506 1754486 . + . ID=gene-VA249_RS08200;Name=VA249_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08200;old_locus_tag=VYA_15240 NZ_AP024165.1 Protein Homology CDS 1753506 1754486 . + 0 ID=cds-WP_221067640.1;Parent=gene-VA249_RS08200;Dbxref=Genbank:WP_221067640.1;Name=WP_221067640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194868.1;locus_tag=VA249_RS08200;product=J domain-containing protein;protein_id=WP_221067640.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1754662 1754847 . + . ID=gene-VA249_RS08205;Name=VA249_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08205;old_locus_tag=VYA_15250 NZ_AP024165.1 Protein Homology CDS 1754662 1754847 . + 0 ID=cds-WP_164837171.1;Parent=gene-VA249_RS08205;Dbxref=Genbank:WP_164837171.1;Name=WP_164837171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428035.1;locus_tag=VA249_RS08205;product=hypothetical protein;protein_id=WP_164837171.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1755231 1755623 . + . ID=gene-VA249_RS08210;Name=VA249_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08210;old_locus_tag=VYA_15260 NZ_AP024165.1 Protein Homology CDS 1755231 1755623 . + 0 ID=cds-WP_221067641.1;Parent=gene-VA249_RS08210;Dbxref=Genbank:WP_221067641.1;Name=WP_221067641.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820828.1;locus_tag=VA249_RS08210;product=SulA-like leucine-rich domain-containing protein;protein_id=WP_221067641.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1755830 1756933 . + . ID=gene-VA249_RS08215;Name=VA249_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08215;old_locus_tag=VYA_15270 NZ_AP024165.1 Protein Homology CDS 1755830 1756933 . + 0 ID=cds-WP_221067642.1;Parent=gene-VA249_RS08215;Dbxref=Genbank:WP_221067642.1;Name=WP_221067642.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017055177.1;locus_tag=VA249_RS08215;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_221067642.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1757015 1757392 . - . ID=gene-VA249_RS08220;Name=VA249_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08220;old_locus_tag=VYA_15280 NZ_AP024165.1 Protein Homology CDS 1757015 1757392 . - 0 ID=cds-WP_221067643.1;Parent=gene-VA249_RS08220;Dbxref=Genbank:WP_221067643.1;Name=WP_221067643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194872.1;locus_tag=VA249_RS08220;product=transporter;protein_id=WP_221067643.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1757661 1760015 . - . ID=gene-VA249_RS08225;Name=VA249_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08225;old_locus_tag=VYA_15290 NZ_AP024165.1 Protein Homology CDS 1757661 1760015 . - 0 ID=cds-WP_221067644.1;Parent=gene-VA249_RS08225;Dbxref=Genbank:WP_221067644.1;Name=WP_221067644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428059.1;locus_tag=VA249_RS08225;product=helicase-related protein;protein_id=WP_221067644.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1760232 1761920 . + . ID=gene-VA249_RS08230;Name=VA249_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08230;old_locus_tag=VYA_15300 NZ_AP024165.1 Protein Homology CDS 1760232 1761920 . + 0 ID=cds-WP_128810724.1;Parent=gene-VA249_RS08230;Dbxref=Genbank:WP_128810724.1;Name=WP_128810724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733414.1;locus_tag=VA249_RS08230;product=NAD-dependent malic enzyme;protein_id=WP_128810724.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1762085 1762876 . + . ID=gene-VA249_RS08235;Name=VA249_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08235;old_locus_tag=VYA_15310 NZ_AP024165.1 Protein Homology CDS 1762085 1762876 . + 0 ID=cds-WP_221067645.1;Parent=gene-VA249_RS08235;Dbxref=Genbank:WP_221067645.1;Name=WP_221067645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647426.1;locus_tag=VA249_RS08235;product=YdcF family protein;protein_id=WP_221067645.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1763119 1764489 . + . ID=gene-VA249_RS08240;Name=VA249_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08240;old_locus_tag=VYA_15320 NZ_AP024165.1 Protein Homology CDS 1763119 1764489 . + 0 ID=cds-WP_221067646.1;Parent=gene-VA249_RS08240;Dbxref=Genbank:WP_221067646.1;Name=WP_221067646.1;Ontology_term=GO:0006820,GO:0008509,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=anion transmembrane transporter activity|0008509||IEA;go_process=anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004738487.1;locus_tag=VA249_RS08240;product=DASS family sodium-coupled anion symporter;protein_id=WP_221067646.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1764695 1766080 . - . ID=gene-VA249_RS08245;Name=VA249_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08245;old_locus_tag=VYA_15330 NZ_AP024165.1 Protein Homology CDS 1764695 1766080 . - 0 ID=cds-WP_221069899.1;Parent=gene-VA249_RS08245;Dbxref=Genbank:WP_221069899.1;Name=WP_221069899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819484.1;locus_tag=VA249_RS08245;product=GGDEF domain-containing protein;protein_id=WP_221069899.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1766420 1767244 . + . ID=gene-VA249_RS08250;Name=VA249_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08250;old_locus_tag=VYA_15340 NZ_AP024165.1 Protein Homology CDS 1766420 1767244 . + 0 ID=cds-WP_221067647.1;Parent=gene-VA249_RS08250;Dbxref=Genbank:WP_221067647.1;Name=WP_221067647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004738492.1;locus_tag=VA249_RS08250;product=DUF2797 domain-containing protein;protein_id=WP_221067647.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1767317 1768552 . - . ID=gene-VA249_RS08255;Name=VA249_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08255;old_locus_tag=VYA_15350 NZ_AP024165.1 Protein Homology CDS 1767317 1768552 . - 0 ID=cds-WP_221067648.1;Parent=gene-VA249_RS08255;Dbxref=Genbank:WP_221067648.1;Name=WP_221067648.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698110.1;locus_tag=VA249_RS08255;product=cysteine desulfurase-like protein;protein_id=WP_221067648.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1768536 1769192 . - . ID=gene-VA249_RS08260;Name=VA249_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08260;old_locus_tag=VYA_15360 NZ_AP024165.1 Protein Homology CDS 1768536 1769192 . - 0 ID=cds-WP_211916553.1;Parent=gene-VA249_RS08260;Dbxref=Genbank:WP_211916553.1;Name=WP_211916553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733405.1;locus_tag=VA249_RS08260;product=2OG-Fe dioxygenase family protein;protein_id=WP_211916553.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1769563 1770519 . + . ID=gene-VA249_RS08265;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=VA249_RS08265;old_locus_tag=VYA_15370 NZ_AP024165.1 Protein Homology CDS 1769563 1770519 . + 0 ID=cds-WP_211916451.1;Parent=gene-VA249_RS08265;Dbxref=Genbank:WP_211916451.1;Name=WP_211916451.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004408195.1;locus_tag=VA249_RS08265;product=thioredoxin-disulfide reductase;protein_id=WP_211916451.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1770654 1772441 . + . ID=gene-VA249_RS08270;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=VA249_RS08270;old_locus_tag=VYA_15380 NZ_AP024165.1 Protein Homology CDS 1770654 1772441 . + 0 ID=cds-WP_221067649.1;Parent=gene-VA249_RS08270;Dbxref=Genbank:WP_221067649.1;Name=WP_221067649.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016021;gbkey=CDS;gene=cydD;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017072950.1;locus_tag=VA249_RS08270;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_221067649.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1772434 1774155 . + . ID=gene-VA249_RS08275;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=VA249_RS08275;old_locus_tag=VYA_15390 NZ_AP024165.1 Protein Homology CDS 1772434 1774155 . + 0 ID=cds-WP_221067650.1;Parent=gene-VA249_RS08275;Dbxref=Genbank:WP_221067650.1;Name=WP_221067650.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016021;gbkey=CDS;gene=cydC;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733398.1;locus_tag=VA249_RS08275;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_221067650.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1774396 1775091 . + . ID=gene-VA249_RS08280;Name=VA249_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08280;old_locus_tag=VYA_15410 NZ_AP024165.1 Protein Homology CDS 1774396 1775091 . + 0 ID=cds-WP_221067651.1;Parent=gene-VA249_RS08280;Dbxref=Genbank:WP_221067651.1;Name=WP_221067651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195550.1;locus_tag=VA249_RS08280;product=MFS transporter;protein_id=WP_221067651.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1775321 1777255 . - . ID=gene-VA249_RS08285;Name=VA249_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08285;old_locus_tag=VYA_15420 NZ_AP024165.1 Protein Homology CDS 1775321 1777255 . - 0 ID=cds-WP_221067652.1;Parent=gene-VA249_RS08285;Dbxref=Genbank:WP_221067652.1;Name=WP_221067652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128235.1;locus_tag=VA249_RS08285;product=diguanylate cyclase;protein_id=WP_221067652.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1777252 1778421 . - . ID=gene-VA249_RS08290;Name=VA249_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08290;old_locus_tag=VYA_15430 NZ_AP024165.1 Protein Homology CDS 1777252 1778421 . - 0 ID=cds-WP_225927090.1;Parent=gene-VA249_RS08290;Dbxref=Genbank:WP_225927090.1;Name=WP_225927090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188164.1;locus_tag=VA249_RS08290;product=extracellular solute-binding protein;protein_id=WP_225927090.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1778705 1779799 . - . ID=gene-VA249_RS08295;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=VA249_RS08295;old_locus_tag=VYA_15440 NZ_AP024165.1 Protein Homology CDS 1778705 1779799 . - 0 ID=cds-WP_221067653.1;Parent=gene-VA249_RS08295;Dbxref=Genbank:WP_221067653.1;Name=WP_221067653.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444514.1;locus_tag=VA249_RS08295;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_221067653.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1780021 1781283 . - . ID=gene-VA249_RS08300;Name=VA249_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08300;old_locus_tag=VYA_15450 NZ_AP024165.1 Protein Homology CDS 1780021 1781283 . - 0 ID=cds-WP_221067654.1;Parent=gene-VA249_RS08300;Dbxref=Genbank:WP_221067654.1;Name=WP_221067654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698120.1;locus_tag=VA249_RS08300;product=DUF945 family protein;protein_id=WP_221067654.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1781470 1783410 . + . ID=gene-VA249_RS08305;Name=VA249_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08305;old_locus_tag=VYA_15460 NZ_AP024165.1 Protein Homology CDS 1781470 1783410 . + 0 ID=cds-WP_221067655.1;Parent=gene-VA249_RS08305;Dbxref=Genbank:WP_221067655.1;Name=WP_221067655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194891.1;locus_tag=VA249_RS08305;product=ATP-binding protein;protein_id=WP_221067655.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1783407 1783904 . + . ID=gene-VA249_RS08310;Name=VA249_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08310;old_locus_tag=VYA_15470 NZ_AP024165.1 Protein Homology CDS 1783407 1783904 . + 0 ID=cds-WP_221067656.1;Parent=gene-VA249_RS08310;Dbxref=Genbank:WP_221067656.1;Name=WP_221067656.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017077846.1;locus_tag=VA249_RS08310;product=response regulator;protein_id=WP_221067656.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1784189 1784737 . + . ID=gene-VA249_RS08315;Name=VA249_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08315;old_locus_tag=VYA_15480 NZ_AP024165.1 Protein Homology CDS 1784189 1784737 . + 0 ID=cds-WP_221069903.1;Parent=gene-VA249_RS08315;Dbxref=Genbank:WP_221069903.1;Name=WP_221069903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019822601.1;locus_tag=VA249_RS08315;product=hypothetical protein;protein_id=WP_221069903.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1784999 1785586 . - . ID=gene-VA249_RS08320;Name=VA249_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08320;old_locus_tag=VYA_15490 NZ_AP024165.1 Protein Homology CDS 1784999 1785586 . - 0 ID=cds-WP_221067657.1;Parent=gene-VA249_RS08320;Dbxref=Genbank:WP_221067657.1;Name=WP_221067657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442238.1;locus_tag=VA249_RS08320;product=TfoX/Sxy family protein;protein_id=WP_221067657.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1785945 1786865 . + . ID=gene-VA249_RS08325;Name=VA249_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08325;old_locus_tag=VYA_15500 NZ_AP024165.1 Protein Homology CDS 1785945 1786865 . + 0 ID=cds-WP_221067658.1;Parent=gene-VA249_RS08325;Dbxref=Genbank:WP_221067658.1;Name=WP_221067658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529189.1;locus_tag=VA249_RS08325;product=HDOD domain-containing protein;protein_id=WP_221067658.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1786967 1787872 . + . ID=gene-VA249_RS08330;Name=VA249_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08330;old_locus_tag=VYA_15510 NZ_AP024165.1 Protein Homology CDS 1786967 1787872 . + 0 ID=cds-WP_128810706.1;Parent=gene-VA249_RS08330;Dbxref=Genbank:WP_128810706.1;Name=WP_128810706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734689.1;locus_tag=VA249_RS08330;product=lysine exporter LysO family protein;protein_id=WP_128810706.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1788081 1788593 . + . ID=gene-VA249_RS08335;Name=VA249_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08335;old_locus_tag=VYA_15520 NZ_AP024165.1 Protein Homology CDS 1788081 1788593 . + 0 ID=cds-WP_128810705.1;Parent=gene-VA249_RS08335;Dbxref=Genbank:WP_128810705.1;Name=WP_128810705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017108224.1;locus_tag=VA249_RS08335;product=hypothetical protein;protein_id=WP_128810705.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1788716 1790362 . + . ID=gene-VA249_RS08340;Name=panP;gbkey=Gene;gene=panP;gene_biotype=protein_coding;locus_tag=VA249_RS08340;old_locus_tag=VYA_15530 NZ_AP024165.1 Protein Homology CDS 1788716 1790362 . + 0 ID=cds-WP_221067659.1;Parent=gene-VA249_RS08340;Dbxref=Genbank:WP_221067659.1;Name=WP_221067659.1;Ontology_term=GO:0015940,GO:0016831;gbkey=CDS;gene=panP;go_function=carboxy-lyase activity|0016831||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841801.1;locus_tag=VA249_RS08340;product=putative pyridoxal-dependent aspartate 1-decarboxylase;protein_id=WP_221067659.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1790882 1791736 . + . ID=gene-VA249_RS08345;Name=VA249_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08345;old_locus_tag=VYA_15540 NZ_AP024165.1 Protein Homology CDS 1790882 1791736 . + 0 ID=cds-WP_211916435.1;Parent=gene-VA249_RS08345;Dbxref=Genbank:WP_211916435.1;Name=WP_211916435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378021.1;locus_tag=VA249_RS08345;product=MurR/RpiR family transcriptional regulator;protein_id=WP_211916435.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1791834 1793072 . - . ID=gene-VA249_RS08350;Name=VA249_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08350;old_locus_tag=VYA_15550 NZ_AP024165.1 Protein Homology CDS 1791834 1793072 . - 0 ID=cds-WP_221067660.1;Parent=gene-VA249_RS08350;Dbxref=Genbank:WP_221067660.1;Name=WP_221067660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296573.1;locus_tag=VA249_RS08350;product=iron-containing alcohol dehydrogenase;protein_id=WP_221067660.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1793428 1793694 . + . ID=gene-VA249_RS08355;Name=VA249_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08355;old_locus_tag=VYA_15560 NZ_AP024165.1 Protein Homology CDS 1793428 1793694 . + 0 ID=cds-WP_128810701.1;Parent=gene-VA249_RS08355;Dbxref=Genbank:WP_128810701.1;Name=WP_128810701.1;Ontology_term=GO:0097573;gbkey=CDS;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004726370.1;locus_tag=VA249_RS08355;product=GrxA family glutaredoxin;protein_id=WP_128810701.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1793887 1795569 . + . ID=gene-VA249_RS08360;Name=VA249_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08360;old_locus_tag=VYA_15570 NZ_AP024165.1 Protein Homology CDS 1793887 1795569 . + 0 ID=cds-WP_221067661.1;Parent=gene-VA249_RS08360;Dbxref=Genbank:WP_221067661.1;Name=WP_221067661.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012550575.1;locus_tag=VA249_RS08360;product=aspartate:alanine antiporter;protein_id=WP_221067661.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1795757 1797193 . - . ID=gene-VA249_RS08365;Name=VA249_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08365;old_locus_tag=VYA_15580 NZ_AP024165.1 Protein Homology CDS 1795757 1797193 . - 0 ID=cds-WP_221067583.1-8;Parent=gene-VA249_RS08365;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS08365;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1797311 1798513 . - . ID=gene-VA249_RS08370;Name=VA249_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08370;old_locus_tag=VYA_15590 NZ_AP024165.1 Protein Homology CDS 1797311 1798513 . - 0 ID=cds-WP_128810700.1;Parent=gene-VA249_RS08370;Dbxref=Genbank:WP_128810700.1;Name=WP_128810700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333002.1;locus_tag=VA249_RS08370;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_128810700.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1798697 1800979 . - . ID=gene-VA249_RS08375;Name=VA249_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08375;old_locus_tag=VYA_15600 NZ_AP024165.1 Protein Homology CDS 1798697 1800979 . - 0 ID=cds-WP_221067662.1;Parent=gene-VA249_RS08375;Dbxref=Genbank:WP_221067662.1;Name=WP_221067662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188170.1;locus_tag=VA249_RS08375;product=acyl-CoA dehydrogenase;protein_id=WP_221067662.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1801075 1801701 . - . ID=gene-VA249_RS08380;Name=VA249_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08380;old_locus_tag=VYA_15610 NZ_AP024165.1 Protein Homology CDS 1801075 1801701 . - 0 ID=cds-WP_221067663.1;Parent=gene-VA249_RS08380;Dbxref=Genbank:WP_221067663.1;Name=WP_221067663.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194896.1;locus_tag=VA249_RS08380;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221067663.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1802377 1803543 . - . ID=gene-VA249_RS08385;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=VA249_RS08385;old_locus_tag=VYA_15620 NZ_AP024165.1 Protein Homology CDS 1802377 1803543 . - 0 ID=cds-WP_221067664.1;Parent=gene-VA249_RS08385;Dbxref=Genbank:WP_221067664.1;Name=WP_221067664.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080661.1;locus_tag=VA249_RS08385;product=Na+/H+ antiporter NhaA;protein_id=WP_221067664.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1803873 1804997 . - . ID=gene-VA249_RS08390;Name=VA249_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08390;old_locus_tag=VYA_15630 NZ_AP024165.1 Protein Homology CDS 1803873 1804997 . - 0 ID=cds-WP_221067665.1;Parent=gene-VA249_RS08390;Dbxref=Genbank:WP_221067665.1;Name=WP_221067665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450604.1;locus_tag=VA249_RS08390;product=carotenoid 1%2C2-hydratase;protein_id=WP_221067665.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1804997 1807450 . - . ID=gene-VA249_RS08395;Name=VA249_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08395;old_locus_tag=VYA_15640 NZ_AP024165.1 Protein Homology CDS 1804997 1807450 . - 0 ID=cds-WP_221067666.1;Parent=gene-VA249_RS08395;Dbxref=Genbank:WP_221067666.1;Name=WP_221067666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705823.1;locus_tag=VA249_RS08395;product=ABC transporter permease;protein_id=WP_221067666.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1807431 1808102 . - . ID=gene-VA249_RS08400;Name=VA249_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08400;old_locus_tag=VYA_15650 NZ_AP024165.1 Protein Homology CDS 1807431 1808102 . - 0 ID=cds-WP_128810695.1;Parent=gene-VA249_RS08400;Dbxref=Genbank:WP_128810695.1;Name=WP_128810695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020330341.1;locus_tag=VA249_RS08400;product=ABC transporter ATP-binding protein;protein_id=WP_128810695.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1808231 1809607 . - . ID=gene-VA249_RS08405;Name=VA249_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08405;old_locus_tag=VYA_15660 NZ_AP024165.1 Protein Homology CDS 1808231 1809607 . - 0 ID=cds-WP_221067667.1;Parent=gene-VA249_RS08405;Dbxref=Genbank:WP_221067667.1;Name=WP_221067667.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004748761.1;locus_tag=VA249_RS08405;product=MATE family efflux transporter;protein_id=WP_221067667.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1809702 1811138 . + . ID=gene-VA249_RS08410;Name=VA249_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08410;old_locus_tag=VYA_15670 NZ_AP024165.1 Protein Homology CDS 1809702 1811138 . + 0 ID=cds-WP_221067668.1;Parent=gene-VA249_RS08410;Dbxref=Genbank:WP_221067668.1;Name=WP_221067668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194901.1;locus_tag=VA249_RS08410;product=DUF2867 domain-containing protein;protein_id=WP_221067668.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1811219 1812280 . - . ID=gene-VA249_RS08415;Name=VA249_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08415;old_locus_tag=VYA_15680 NZ_AP024165.1 Protein Homology CDS 1811219 1812280 . - 0 ID=cds-WP_221067669.1;Parent=gene-VA249_RS08415;Dbxref=Genbank:WP_221067669.1;Name=WP_221067669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196941.1;locus_tag=VA249_RS08415;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_221067669.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1812519 1814621 . + . ID=gene-VA249_RS08420;Name=VA249_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08420;old_locus_tag=VYA_15690 NZ_AP024165.1 Protein Homology CDS 1812519 1814621 . + 0 ID=cds-WP_221069904.1;Parent=gene-VA249_RS08420;Dbxref=Genbank:WP_221069904.1;Name=WP_221069904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017080038.1;locus_tag=VA249_RS08420;product=alpha-galactosidase;protein_id=WP_221069904.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1814755 1816476 . + . ID=gene-VA249_RS08425;Name=VA249_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08425;old_locus_tag=VYA_15700 NZ_AP024165.1 Protein Homology CDS 1814755 1816476 . + 0 ID=cds-WP_221067670.1;Parent=gene-VA249_RS08425;Dbxref=Genbank:WP_221067670.1;Name=WP_221067670.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634143.1;locus_tag=VA249_RS08425;product=solute:sodium symporter family transporter;protein_id=WP_221067670.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1816562 1817224 . - . ID=gene-VA249_RS08430;Name=VA249_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08430;old_locus_tag=VYA_15710 NZ_AP024165.1 Protein Homology CDS 1816562 1817224 . - 0 ID=cds-WP_221067671.1;Parent=gene-VA249_RS08430;Dbxref=Genbank:WP_221067671.1;Name=WP_221067671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450612.1;locus_tag=VA249_RS08430;product=DUF2913 family protein;protein_id=WP_221067671.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1817224 1818426 . - . ID=gene-VA249_RS08435;Name=VA249_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08435;old_locus_tag=VYA_15720 NZ_AP024165.1 Protein Homology CDS 1817224 1818426 . - 0 ID=cds-WP_128810690.1;Parent=gene-VA249_RS08435;Dbxref=Genbank:WP_128810690.1;Name=WP_128810690.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448674.1;locus_tag=VA249_RS08435;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_128810690.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1818726 1819427 . - . ID=gene-VA249_RS08440;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=VA249_RS08440;old_locus_tag=VYA_15730 NZ_AP024165.1 Protein Homology CDS 1818726 1819427 . - 0 ID=cds-WP_221067672.1;Parent=gene-VA249_RS08440;Dbxref=Genbank:WP_221067672.1;Name=WP_221067672.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080669.1;locus_tag=VA249_RS08440;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_221067672.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1819585 1821342 . + . ID=gene-VA249_RS08445;Name=VA249_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08445;old_locus_tag=VYA_15740 NZ_AP024165.1 Protein Homology CDS 1819585 1821342 . + 0 ID=cds-WP_221067673.1;Parent=gene-VA249_RS08445;Dbxref=Genbank:WP_221067673.1;Name=WP_221067673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386040.1;locus_tag=VA249_RS08445;product=DEAD/DEAH box helicase;protein_id=WP_221067673.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1821418 1821834 . + . ID=gene-VA249_RS08450;Name=VA249_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08450;old_locus_tag=VYA_15750 NZ_AP024165.1 Protein Homology CDS 1821418 1821834 . + 0 ID=cds-WP_221067674.1;Parent=gene-VA249_RS08450;Dbxref=Genbank:WP_221067674.1;Name=WP_221067674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462404.1;locus_tag=VA249_RS08450;product=hypothetical protein;protein_id=WP_221067674.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1822011 1822670 . + . ID=gene-VA249_RS08455;Name=VA249_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08455;old_locus_tag=VYA_15760 NZ_AP024165.1 Protein Homology CDS 1822011 1822670 . + 0 ID=cds-WP_128810687.1;Parent=gene-VA249_RS08455;Dbxref=Genbank:WP_128810687.1;Name=WP_128810687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004414242.1;locus_tag=VA249_RS08455;product=response regulator transcription factor;protein_id=WP_128810687.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1822660 1824036 . + . ID=gene-VA249_RS08460;Name=VA249_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08460;old_locus_tag=VYA_15770 NZ_AP024165.1 Protein Homology CDS 1822660 1824036 . + 0 ID=cds-WP_221067675.1;Parent=gene-VA249_RS08460;Dbxref=Genbank:WP_221067675.1;Name=WP_221067675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128265.1;locus_tag=VA249_RS08460;product=ATP-binding protein;protein_id=WP_221067675.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1824275 1824553 . + . ID=gene-VA249_RS08465;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=VA249_RS08465;old_locus_tag=VYA_15780 NZ_AP024165.1 Protein Homology CDS 1824275 1824553 . + 0 ID=cds-WP_128810685.1;Parent=gene-VA249_RS08465;Dbxref=Genbank:WP_128810685.1;Name=WP_128810685.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529240.1;locus_tag=VA249_RS08465;product=50S ribosomal protein L25;protein_id=WP_128810685.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1825156 1826859 . + . ID=gene-VA249_RS08470;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=VA249_RS08470;old_locus_tag=VYA_15790 NZ_AP024165.1 Protein Homology CDS 1825156 1826859 . + 0 ID=cds-WP_221067676.1;Parent=gene-VA249_RS08470;Dbxref=Genbank:WP_221067676.1;Name=WP_221067676.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449043.1;locus_tag=VA249_RS08470;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_221067676.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1827359 1827580 . + . ID=gene-VA249_RS08475;Name=VA249_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08475;old_locus_tag=VYA_15800 NZ_AP024165.1 Protein Homology CDS 1827359 1827580 . + 0 ID=cds-WP_221067677.1;Parent=gene-VA249_RS08475;Dbxref=Genbank:WP_221067677.1;Name=WP_221067677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450627.1;locus_tag=VA249_RS08475;product=hypothetical protein;protein_id=WP_221067677.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1827729 1827977 . - . ID=gene-VA249_RS08480;Name=VA249_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08480 NZ_AP024165.1 Protein Homology CDS 1827729 1827977 . - 0 ID=cds-WP_221067678.1;Parent=gene-VA249_RS08480;Dbxref=Genbank:WP_221067678.1;Name=WP_221067678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841823.1;locus_tag=VA249_RS08480;product=DUF1289 domain-containing protein;protein_id=WP_221067678.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1828195 1828641 . + . ID=gene-VA249_RS08485;Name=VA249_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08485;old_locus_tag=VYA_15810 NZ_AP024165.1 Protein Homology CDS 1828195 1828641 . + 0 ID=cds-WP_128810682.1;Parent=gene-VA249_RS08485;Dbxref=Genbank:WP_128810682.1;Name=WP_128810682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128273.1;locus_tag=VA249_RS08485;product=META domain-containing protein;protein_id=WP_128810682.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1828685 1829287 . - . ID=gene-VA249_RS08490;Name=VA249_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08490;old_locus_tag=VYA_15820 NZ_AP024165.1 Protein Homology CDS 1828685 1829287 . - 0 ID=cds-WP_221067679.1;Parent=gene-VA249_RS08490;Dbxref=Genbank:WP_221067679.1;Name=WP_221067679.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442298.1;locus_tag=VA249_RS08490;product=response regulator;protein_id=WP_221067679.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1829277 1831082 . - . ID=gene-VA249_RS08495;Name=VA249_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08495;old_locus_tag=VYA_15830 NZ_AP024165.1 Protein Homology CDS 1829277 1831082 . - 0 ID=cds-WP_221067680.1;Parent=gene-VA249_RS08495;Dbxref=Genbank:WP_221067680.1;Name=WP_221067680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425752.1;locus_tag=VA249_RS08495;product=PhnD/SsuA/transferrin family substrate-binding protein;protein_id=WP_221067680.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1831392 1832375 . + . ID=gene-VA249_RS08500;Name=VA249_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08500;old_locus_tag=VYA_15840 NZ_AP024165.1 Protein Homology CDS 1831392 1832375 . + 0 ID=cds-WP_221067681.1;Parent=gene-VA249_RS08500;Dbxref=Genbank:WP_221067681.1;Name=WP_221067681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819504.1;locus_tag=VA249_RS08500;product=rhodanese-like domain-containing protein;protein_id=WP_221067681.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1832396 1834192 . + . ID=gene-VA249_RS08505;Name=VA249_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08505;old_locus_tag=VYA_15850 NZ_AP024165.1 Protein Homology CDS 1832396 1834192 . + 0 ID=cds-WP_221067682.1;Parent=gene-VA249_RS08505;Dbxref=Genbank:WP_221067682.1;Name=WP_221067682.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296556.1;locus_tag=VA249_RS08505;product=FAD-dependent oxidoreductase;protein_id=WP_221067682.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1834189 1834959 . + . ID=gene-VA249_RS08510;Name=VA249_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08510;old_locus_tag=VYA_15860 NZ_AP024165.1 Protein Homology CDS 1834189 1834959 . + 0 ID=cds-WP_128810678.1;Parent=gene-VA249_RS08510;Dbxref=Genbank:WP_128810678.1;Name=WP_128810678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066863.1;locus_tag=VA249_RS08510;product=(Fe-S)-binding protein;protein_id=WP_128810678.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1834985 1835662 . + . ID=gene-VA249_RS08515;Name=VA249_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08515;old_locus_tag=VYA_15870 NZ_AP024165.1 Protein Homology CDS 1834985 1835662 . + 0 ID=cds-WP_221067683.1;Parent=gene-VA249_RS08515;Dbxref=Genbank:WP_221067683.1;Name=WP_221067683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005421869.1;locus_tag=VA249_RS08515;product=TVP38/TMEM64 family protein;protein_id=WP_221067683.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1836058 1837218 . + . ID=gene-VA249_RS08520;Name=VA249_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08520;old_locus_tag=VYA_15880 NZ_AP024165.1 Protein Homology CDS 1836058 1837218 . + 0 ID=cds-WP_221067684.1;Parent=gene-VA249_RS08520;Dbxref=Genbank:WP_221067684.1;Name=WP_221067684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016788791.1;locus_tag=VA249_RS08520;product=ABC transporter substrate-binding protein;protein_id=WP_221067684.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1837228 1838937 . + . ID=gene-VA249_RS08525;Name=VA249_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08525;old_locus_tag=VYA_15890 NZ_AP024165.1 Protein Homology CDS 1837228 1838937 . + 0 ID=cds-WP_221067685.1;Parent=gene-VA249_RS08525;Dbxref=Genbank:WP_221067685.1;Name=WP_221067685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296553.1;locus_tag=VA249_RS08525;product=thiamine ABC transporter permease;protein_id=WP_221067685.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1838903 1839550 . + . ID=gene-VA249_RS08530;Name=VA249_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08530;old_locus_tag=VYA_15900 NZ_AP024165.1 Protein Homology CDS 1838903 1839550 . + 0 ID=cds-WP_221067686.1;Parent=gene-VA249_RS08530;Dbxref=Genbank:WP_221067686.1;Name=WP_221067686.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449070.1;locus_tag=VA249_RS08530;product=ATP-binding cassette domain-containing protein;protein_id=WP_221067686.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1839543 1840154 . + . ID=gene-VA249_RS08535;Name=VA249_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08535;old_locus_tag=VYA_15910 NZ_AP024165.1 Protein Homology CDS 1839543 1840154 . + 0 ID=cds-WP_128810673.1;Parent=gene-VA249_RS08535;Dbxref=Genbank:WP_128810673.1;Name=WP_128810673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005495656.1;locus_tag=VA249_RS08535;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_128810673.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1840363 1840839 . + . ID=gene-VA249_RS08540;Name=VA249_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08540;old_locus_tag=VYA_15920 NZ_AP024165.1 Protein Homology CDS 1840363 1840839 . + 0 ID=cds-WP_221067687.1;Parent=gene-VA249_RS08540;Dbxref=Genbank:WP_221067687.1;Name=WP_221067687.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841939.1;locus_tag=VA249_RS08540;product=glycine zipper 2TM domain-containing protein;protein_id=WP_221067687.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1841020 1842546 . + . ID=gene-VA249_RS08545;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=VA249_RS08545;old_locus_tag=VYA_15930 NZ_AP024165.1 Protein Homology CDS 1841020 1842546 . + 0 ID=cds-WP_221067688.1;Parent=gene-VA249_RS08545;Dbxref=Genbank:WP_221067688.1;Name=WP_221067688.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080686.1;locus_tag=VA249_RS08545;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_221067688.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1842724 1844385 . + . ID=gene-VA249_RS08550;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=VA249_RS08550;old_locus_tag=VYA_15940 NZ_AP024165.1 Protein Homology CDS 1842724 1844385 . + 0 ID=cds-WP_221067689.1;Parent=gene-VA249_RS08550;Dbxref=Genbank:WP_221067689.1;Name=WP_221067689.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012535620.1;locus_tag=VA249_RS08550;product=hydroxylamine reductase;protein_id=WP_221067689.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1844470 1845513 . + . ID=gene-VA249_RS08555;Name=VA249_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08555;old_locus_tag=VYA_15950 NZ_AP024165.1 Protein Homology CDS 1844470 1845513 . + 0 ID=cds-WP_221067690.1;Parent=gene-VA249_RS08555;Dbxref=Genbank:WP_221067690.1;Name=WP_221067690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450665.1;locus_tag=VA249_RS08555;product=hybrid-cluster NAD(P)-dependent oxidoreductase;protein_id=WP_221067690.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1845647 1846579 . - . ID=gene-VA249_RS08560;Name=VA249_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08560;old_locus_tag=VYA_15960 NZ_AP024165.1 Protein Homology CDS 1845647 1846579 . - 0 ID=cds-WP_221067691.1;Parent=gene-VA249_RS08560;Dbxref=Genbank:WP_221067691.1;Name=WP_221067691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332974.1;locus_tag=VA249_RS08560;product=class I SAM-dependent methyltransferase;protein_id=WP_221067691.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1846650 1847342 . - . ID=gene-VA249_RS08565;Name=VA249_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08565;old_locus_tag=VYA_15970 NZ_AP024165.1 Protein Homology CDS 1846650 1847342 . - 0 ID=cds-WP_221067692.1;Parent=gene-VA249_RS08565;Dbxref=Genbank:WP_221067692.1;Name=WP_221067692.1;Ontology_term=GO:0001522,GO:0004730;gbkey=CDS;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188186.1;locus_tag=VA249_RS08565;product=TIGR01621 family pseudouridine synthase;protein_id=WP_221067692.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1847392 1849005 . - . ID=gene-VA249_RS08570;Name=VA249_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08570;old_locus_tag=VYA_15980 NZ_AP024165.1 Protein Homology CDS 1847392 1849005 . - 0 ID=cds-WP_221067693.1;Parent=gene-VA249_RS08570;Dbxref=Genbank:WP_221067693.1;Name=WP_221067693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017094404.1;locus_tag=VA249_RS08570;product=methyl-accepting chemotaxis protein;protein_id=WP_221067693.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1849234 1850604 . - . ID=gene-VA249_RS08575;Name=VA249_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08575;old_locus_tag=VYA_15990 NZ_AP024165.1 Protein Homology CDS 1849234 1850604 . - 0 ID=cds-WP_242598070.1;Parent=gene-VA249_RS08575;Dbxref=Genbank:WP_242598070.1;Name=WP_242598070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005470304.1;locus_tag=VA249_RS08575;product=sodium-dependent transporter;protein_id=WP_242598070.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1851038 1852492 . + . ID=gene-VA249_RS08580;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=VA249_RS08580;old_locus_tag=VYA_16000 NZ_AP024165.1 Protein Homology CDS 1851038 1852492 . + 0 ID=cds-WP_128810665.1;Parent=gene-VA249_RS08580;Dbxref=Genbank:WP_128810665.1;Name=WP_128810665.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362099.1;locus_tag=VA249_RS08580;product=cardiolipin synthase;protein_id=WP_128810665.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1852679 1853884 . + . ID=gene-VA249_RS08585;Name=VA249_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08585;old_locus_tag=VYA_16010 NZ_AP024165.1 Protein Homology CDS 1852679 1853884 . + 0 ID=cds-WP_221067694.1;Parent=gene-VA249_RS08585;Dbxref=Genbank:WP_221067694.1;Name=WP_221067694.1;Ontology_term=GO:0019346,GO:0004121;gbkey=CDS;go_function=cystathionine beta-lyase activity|0004121||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450676.1;locus_tag=VA249_RS08585;product=cystathionine beta-lyase;protein_id=WP_221067694.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1853946 1854509 . - . ID=gene-VA249_RS08590;Name=VA249_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08590;old_locus_tag=VYA_16020 NZ_AP024165.1 Protein Homology CDS 1853946 1854509 . - 0 ID=cds-WP_221067695.1;Parent=gene-VA249_RS08590;Dbxref=Genbank:WP_221067695.1;Name=WP_221067695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127654.1;locus_tag=VA249_RS08590;product=DNA-3-methyladenine glycosylase I;protein_id=WP_221067695.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1854578 1857682 . - . ID=gene-VA249_RS08595;Name=vmeI;gbkey=Gene;gene=vmeI;gene_biotype=protein_coding;locus_tag=VA249_RS08595;old_locus_tag=VYA_16030 NZ_AP024165.1 Protein Homology CDS 1854578 1857682 . - 0 ID=cds-WP_221067696.1;Parent=gene-VA249_RS08595;Dbxref=Genbank:WP_221067696.1;Name=WP_221067696.1;gbkey=CDS;gene=vmeI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478902.1;locus_tag=VA249_RS08595;product=efflux RND transporter permease subunit VmeI;protein_id=WP_221067696.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1857679 1858764 . - . ID=gene-VA249_RS08600;Name=VA249_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08600;old_locus_tag=VYA_16040 NZ_AP024165.1 Protein Homology CDS 1857679 1858764 . - 0 ID=cds-WP_221067697.1;Parent=gene-VA249_RS08600;Dbxref=Genbank:WP_221067697.1;Name=WP_221067697.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698164.1;locus_tag=VA249_RS08600;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221067697.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1858766 1859797 . - . ID=gene-VA249_RS08605;Name=VA249_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08605;old_locus_tag=VYA_16050 NZ_AP024165.1 Protein Homology CDS 1858766 1859797 . - 0 ID=cds-WP_128810661.1;Parent=gene-VA249_RS08605;Dbxref=Genbank:WP_128810661.1;Name=WP_128810661.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462329.1;locus_tag=VA249_RS08605;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_128810661.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1859848 1860069 . - . ID=gene-VA249_RS08610;Name=VA249_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08610;old_locus_tag=VYA_16060 NZ_AP024165.1 GeneMarkS-2+ CDS 1859848 1860069 . - 0 ID=cds-WP_221067698.1;Parent=gene-VA249_RS08610;Dbxref=Genbank:WP_221067698.1;Name=WP_221067698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08610;product=hypothetical protein;protein_id=WP_221067698.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1860137 1860526 . - . ID=gene-VA249_RS08615;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=VA249_RS08615;old_locus_tag=VYA_16070 NZ_AP024165.1 Protein Homology CDS 1860137 1860526 . - 0 ID=cds-WP_221067699.1;Parent=gene-VA249_RS08615;Dbxref=Genbank:WP_221067699.1;Name=WP_221067699.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450693.1;locus_tag=VA249_RS08615;product=envelope stress response membrane protein PspC;protein_id=WP_221067699.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1860519 1860752 . - . ID=gene-VA249_RS08620;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=VA249_RS08620;old_locus_tag=VYA_16080 NZ_AP024165.1 Protein Homology CDS 1860519 1860752 . - 0 ID=cds-WP_128810659.1;Parent=gene-VA249_RS08620;Dbxref=Genbank:WP_128810659.1;Name=WP_128810659.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449101.1;locus_tag=VA249_RS08620;product=envelope stress response membrane protein PspB;protein_id=WP_128810659.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1860767 1861438 . - . ID=gene-VA249_RS08625;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=VA249_RS08625;old_locus_tag=VYA_16090 NZ_AP024165.1 Protein Homology CDS 1860767 1861438 . - 0 ID=cds-WP_128810658.1;Parent=gene-VA249_RS08625;Dbxref=Genbank:WP_128810658.1;Name=WP_128810658.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425704.1;locus_tag=VA249_RS08625;product=phage shock protein PspA;protein_id=WP_128810658.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1861668 1862678 . + . ID=gene-VA249_RS08630;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=VA249_RS08630;old_locus_tag=VYA_16100 NZ_AP024165.1 Protein Homology CDS 1861668 1862678 . + 0 ID=cds-WP_221067700.1;Parent=gene-VA249_RS08630;Dbxref=Genbank:WP_221067700.1;Name=WP_221067700.1;Ontology_term=GO:0006355,GO:0140110,GO:0005737;gbkey=CDS;gene=pspF;go_component=cytoplasm|0005737||IEA;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005393296.1;locus_tag=VA249_RS08630;product=phage shock protein operon transcriptional activator;protein_id=WP_221067700.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1862880 1864499 . + . ID=gene-VA249_RS08635;Name=VA249_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08635;old_locus_tag=VYA_16110 NZ_AP024165.1 Protein Homology CDS 1862880 1864499 . + 0 ID=cds-WP_128812264.1;Parent=gene-VA249_RS08635;Dbxref=Genbank:WP_128812264.1;Name=WP_128812264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017104081.1;locus_tag=VA249_RS08635;product=ABC transporter substrate-binding protein;protein_id=WP_128812264.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1864499 1865461 . + . ID=gene-VA249_RS08640;Name=VA249_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08640;old_locus_tag=VYA_16120 NZ_AP024165.1 Protein Homology CDS 1864499 1865461 . + 0 ID=cds-WP_221067701.1;Parent=gene-VA249_RS08640;Dbxref=Genbank:WP_221067701.1;Name=WP_221067701.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010440077.1;locus_tag=VA249_RS08640;product=ABC transporter permease subunit;protein_id=WP_221067701.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1865448 1866335 . + . ID=gene-VA249_RS08645;Name=VA249_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08645;old_locus_tag=VYA_16130 NZ_AP024165.1 Protein Homology CDS 1865448 1866335 . + 0 ID=cds-WP_221067702.1;Parent=gene-VA249_RS08645;Dbxref=Genbank:WP_221067702.1;Name=WP_221067702.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019824296.1;locus_tag=VA249_RS08645;product=ABC transporter permease subunit;protein_id=WP_221067702.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1866335 1867330 . + . ID=gene-VA249_RS08650;Name=VA249_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08650;old_locus_tag=VYA_16140 NZ_AP024165.1 Protein Homology CDS 1866335 1867330 . + 0 ID=cds-WP_221067703.1;Parent=gene-VA249_RS08650;Dbxref=Genbank:WP_221067703.1;Name=WP_221067703.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378126.1;locus_tag=VA249_RS08650;product=ATP-binding cassette domain-containing protein;protein_id=WP_221067703.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1867327 1868109 . + . ID=gene-VA249_RS08655;Name=VA249_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08655;old_locus_tag=VYA_16150 NZ_AP024165.1 Protein Homology CDS 1867327 1868109 . + 0 ID=cds-WP_128810653.1;Parent=gene-VA249_RS08655;Dbxref=Genbank:WP_128810653.1;Name=WP_128810653.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449113.1;locus_tag=VA249_RS08655;product=ATP-binding cassette domain-containing protein;protein_id=WP_128810653.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1868265 1868654 . - . ID=gene-VA249_RS08660;Name=VA249_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08660;old_locus_tag=VYA_16160 NZ_AP024165.1 Protein Homology CDS 1868265 1868654 . - 0 ID=cds-WP_128810652.1;Parent=gene-VA249_RS08660;Dbxref=Genbank:WP_128810652.1;Name=WP_128810652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005393310.1;locus_tag=VA249_RS08660;product=DUF2750 domain-containing protein;protein_id=WP_128810652.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1868730 1869635 . - . ID=gene-VA249_RS08665;Name=VA249_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08665;old_locus_tag=VYA_16170 NZ_AP024165.1 Protein Homology CDS 1868730 1869635 . - 0 ID=cds-WP_221067704.1;Parent=gene-VA249_RS08665;Dbxref=Genbank:WP_221067704.1;Name=WP_221067704.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004413526.1;locus_tag=VA249_RS08665;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_221067704.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1869843 1871057 . + . ID=gene-VA249_RS08670;Name=VA249_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08670;old_locus_tag=VYA_16180 NZ_AP024165.1 Protein Homology CDS 1869843 1871057 . + 0 ID=cds-WP_221067705.1;Parent=gene-VA249_RS08670;Dbxref=Genbank:WP_221067705.1;Name=WP_221067705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127643.1;locus_tag=VA249_RS08670;product=arsenic efflux protein;protein_id=WP_221067705.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1871128 1872867 . - . ID=gene-VA249_RS08675;Name=VA249_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08675;old_locus_tag=VYA_16190 NZ_AP024165.1 Protein Homology CDS 1871128 1872867 . - 0 ID=cds-WP_221067706.1;Parent=gene-VA249_RS08675;Dbxref=Genbank:WP_221067706.1;Name=WP_221067706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296539.1;locus_tag=VA249_RS08675;product=alpha-galactosidase;protein_id=WP_221067706.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1873068 1875530 . - . ID=gene-VA249_RS08680;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=VA249_RS08680;old_locus_tag=VYA_16200 NZ_AP024165.1 Protein Homology CDS 1873068 1875530 . - 0 ID=cds-WP_221067707.1;Parent=gene-VA249_RS08680;Dbxref=Genbank:WP_221067707.1;Name=WP_221067707.1;Ontology_term=GO:0009061,GO:0009055,GO:0030151,GO:0050626,GO:0009322;gbkey=CDS;gene=torA;go_component=trimethylamine-N-oxide reductase complex|0009322||IEA;go_function=electron transfer activity|0009055||IEA,molybdenum ion binding|0030151||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008074698.1;locus_tag=VA249_RS08680;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_221067707.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1875557 1876741 . - . ID=gene-VA249_RS08685;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=VA249_RS08685;old_locus_tag=VYA_16210 NZ_AP024165.1 Protein Homology CDS 1875557 1876741 . - 0 ID=cds-WP_221067708.1;Parent=gene-VA249_RS08685;Dbxref=Genbank:WP_221067708.1;Name=WP_221067708.1;gbkey=CDS;gene=torC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838527.1;locus_tag=VA249_RS08685;product=pentaheme c-type cytochrome TorC;protein_id=WP_221067708.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1876792 1876971 . - . ID=gene-VA249_RS08690;Name=torE;gbkey=Gene;gene=torE;gene_biotype=protein_coding;locus_tag=VA249_RS08690;old_locus_tag=VYA_16220 NZ_AP024165.1 Protein Homology CDS 1876792 1876971 . - 0 ID=cds-WP_005450728.1;Parent=gene-VA249_RS08690;Dbxref=Genbank:WP_005450728.1;Name=WP_005450728.1;Ontology_term=GO:0009061,GO:0009033,GO:0009322;gbkey=CDS;gene=torE;go_component=trimethylamine-N-oxide reductase complex|0009322||IEA;go_function=trimethylamine-N-oxide reductase activity|0009033||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017093170.1;locus_tag=VA249_RS08690;product=trimethylamine N-oxide reductase system protein TorE;protein_id=WP_005450728.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1877434 1878258 . + . ID=gene-VA249_RS08695;Name=VA249_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08695;old_locus_tag=VYA_16230 NZ_AP024165.1 Protein Homology CDS 1877434 1878258 . + 0 ID=cds-WP_221067709.1;Parent=gene-VA249_RS08695;Dbxref=Genbank:WP_221067709.1;Name=WP_221067709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450730.1;locus_tag=VA249_RS08695;product=ABC transporter permease;protein_id=WP_221067709.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1878477 1878614 . + . ID=gene-VA249_RS08700;Name=VA249_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08700;old_locus_tag=VYA_16240 NZ_AP024165.1 GeneMarkS-2+ CDS 1878477 1878614 . + 0 ID=cds-WP_164837166.1;Parent=gene-VA249_RS08700;Dbxref=Genbank:WP_164837166.1;Name=WP_164837166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS08700;product=hypothetical protein;protein_id=WP_164837166.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1878752 1879612 . - . ID=gene-VA249_RS08705;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=VA249_RS08705;old_locus_tag=VYA_16250 NZ_AP024165.1 Protein Homology CDS 1878752 1879612 . - 0 ID=cds-WP_128810647.1;Parent=gene-VA249_RS08705;Dbxref=Genbank:WP_128810647.1;Name=WP_128810647.1;Ontology_term=GO:0015724,GO:0015499,GO:0005887;gbkey=CDS;gene=focA;go_component=integral component of plasma membrane|0005887||IEA;go_function=formate transmembrane transporter activity|0015499||IEA;go_process=formate transport|0015724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127639.1;locus_tag=VA249_RS08705;product=formate transporter FocA;protein_id=WP_128810647.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1880044 1880277 . + . ID=gene-VA249_RS08710;Name=VA249_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08710;old_locus_tag=VYA_16260 NZ_AP024165.1 Protein Homology CDS 1880044 1880277 . + 0 ID=cds-WP_128810646.1;Parent=gene-VA249_RS08710;Dbxref=Genbank:WP_128810646.1;Name=WP_128810646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673327.1;locus_tag=VA249_RS08710;product=TIGR02647 family protein;protein_id=WP_128810646.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1880408 1880830 . - . ID=gene-VA249_RS08715;Name=VA249_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08715;old_locus_tag=VYA_16270 NZ_AP024165.1 Protein Homology CDS 1880408 1880830 . - 0 ID=cds-WP_128810645.1;Parent=gene-VA249_RS08715;Dbxref=Genbank:WP_128810645.1;Name=WP_128810645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450737.1;locus_tag=VA249_RS08715;product=PACE efflux transporter;protein_id=WP_128810645.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1880919 1881791 . + . ID=gene-VA249_RS08720;Name=VA249_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08720;old_locus_tag=VYA_16280 NZ_AP024165.1 Protein Homology CDS 1880919 1881791 . + 0 ID=cds-WP_221067710.1;Parent=gene-VA249_RS08720;Dbxref=Genbank:WP_221067710.1;Name=WP_221067710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430266.1;locus_tag=VA249_RS08720;product=LysR family transcriptional regulator;protein_id=WP_221067710.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1881820 1882647 . + . ID=gene-VA249_RS08725;Name=VA249_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08725;old_locus_tag=VYA_16290 NZ_AP024165.1 Protein Homology CDS 1881820 1882647 . + 0 ID=cds-WP_221067711.1;Parent=gene-VA249_RS08725;Dbxref=Genbank:WP_221067711.1;Name=WP_221067711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705766.1;locus_tag=VA249_RS08725;product=NAD(P)H-binding protein;protein_id=WP_221067711.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1882644 1883297 . + . ID=gene-VA249_RS08730;Name=VA249_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08730;old_locus_tag=VYA_16300 NZ_AP024165.1 Protein Homology CDS 1882644 1883297 . + 0 ID=cds-WP_221067712.1;Parent=gene-VA249_RS08730;Dbxref=Genbank:WP_221067712.1;Name=WP_221067712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015296534.1;locus_tag=VA249_RS08730;product=YdcF family protein;protein_id=WP_221067712.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1883456 1884034 . - . ID=gene-VA249_RS08735;Name=VA249_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08735;old_locus_tag=VYA_16320 NZ_AP024165.1 Protein Homology CDS 1883456 1884034 . - 0 ID=cds-WP_211916371.1;Parent=gene-VA249_RS08735;Dbxref=Genbank:WP_211916371.1;Name=WP_211916371.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450744.1;locus_tag=VA249_RS08735;product=thymidine kinase;protein_id=WP_211916371.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1884119 1885501 . - . ID=gene-VA249_RS08740;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=VA249_RS08740;old_locus_tag=VYA_16330 NZ_AP024165.1 Protein Homology CDS 1884119 1885501 . - 0 ID=cds-WP_221067713.1;Parent=gene-VA249_RS08740;Dbxref=Genbank:WP_221067713.1;Name=WP_221067713.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603476.1;locus_tag=VA249_RS08740;product=cysteine--tRNA ligase;protein_id=WP_221067713.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1885706 1886200 . + . ID=gene-VA249_RS08745;Name=VA249_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08745;old_locus_tag=VYA_16340 NZ_AP024165.1 Protein Homology CDS 1885706 1886200 . + 0 ID=cds-WP_119463360.1;Parent=gene-VA249_RS08745;Dbxref=Genbank:WP_119463360.1;Name=WP_119463360.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332956.1;locus_tag=VA249_RS08745;product=peptidylprolyl isomerase;protein_id=WP_119463360.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1886262 1886999 . + . ID=gene-VA249_RS08750;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=VA249_RS08750;old_locus_tag=VYA_16350 NZ_AP024165.1 Protein Homology CDS 1886262 1886999 . + 0 ID=cds-WP_221067714.1;Parent=gene-VA249_RS08750;Dbxref=Genbank:WP_221067714.1;Name=WP_221067714.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743038.1;locus_tag=VA249_RS08750;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_221067714.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1887100 1888314 . + . ID=gene-VA249_RS08755;Name=VA249_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08755;old_locus_tag=VYA_16360 NZ_AP024165.1 Protein Homology CDS 1887100 1888314 . + 0 ID=cds-WP_221067715.1;Parent=gene-VA249_RS08755;Dbxref=Genbank:WP_221067715.1;Name=WP_221067715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332953.1;locus_tag=VA249_RS08755;product=EAL domain-containing protein;protein_id=WP_221067715.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1888366 1888869 . + . ID=gene-VA249_RS08760;Name=VA249_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08760;old_locus_tag=VYA_16370 NZ_AP024165.1 Protein Homology CDS 1888366 1888869 . + 0 ID=cds-WP_221067716.1;Parent=gene-VA249_RS08760;Dbxref=Genbank:WP_221067716.1;Name=WP_221067716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150025.1;locus_tag=VA249_RS08760;product=YchJ family protein;protein_id=WP_221067716.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1889247 1889882 . - . ID=gene-VA249_RS08765;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=VA249_RS08765;old_locus_tag=VYA_16380 NZ_AP024165.1 Protein Homology CDS 1889247 1889882 . - 0 ID=cds-WP_005450749.1;Parent=gene-VA249_RS08765;Dbxref=Genbank:WP_005450749.1;Name=WP_005450749.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005389826.1;locus_tag=VA249_RS08765;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_005450749.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1889879 1890652 . - . ID=gene-VA249_RS08770;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=VA249_RS08770;old_locus_tag=VYA_16390 NZ_AP024165.1 Protein Homology CDS 1889879 1890652 . - 0 ID=cds-WP_004749837.1;Parent=gene-VA249_RS08770;Dbxref=Genbank:WP_004749837.1;Name=WP_004749837.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005495716.1;locus_tag=VA249_RS08770;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_004749837.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1890634 1891371 . - . ID=gene-VA249_RS08775;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=VA249_RS08775;old_locus_tag=VYA_16400 NZ_AP024165.1 Protein Homology CDS 1890634 1891371 . - 0 ID=cds-WP_005470302.1;Parent=gene-VA249_RS08775;Dbxref=Genbank:WP_005470302.1;Name=WP_005470302.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014231491.1;locus_tag=VA249_RS08775;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_005470302.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1891384 1891998 . - . ID=gene-VA249_RS08780;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=VA249_RS08780;old_locus_tag=VYA_16410 NZ_AP024165.1 Protein Homology CDS 1891384 1891998 . - 0 ID=cds-WP_221067717.1;Parent=gene-VA249_RS08780;Dbxref=Genbank:WP_221067717.1;Name=WP_221067717.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427529.1;locus_tag=VA249_RS08780;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_221067717.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1892025 1893098 . - . ID=gene-VA249_RS08785;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=VA249_RS08785;old_locus_tag=VYA_16420 NZ_AP024165.1 Protein Homology CDS 1892025 1893098 . - 0 ID=cds-WP_221067718.1;Parent=gene-VA249_RS08785;Dbxref=Genbank:WP_221067718.1;Name=WP_221067718.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127627.1;locus_tag=VA249_RS08785;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_221067718.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1893169 1894209 . - . ID=gene-VA249_RS08790;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=VA249_RS08790;old_locus_tag=VYA_16430 NZ_AP024165.1 Protein Homology CDS 1893169 1894209 . - 0 ID=cds-WP_221067719.1;Parent=gene-VA249_RS08790;Dbxref=Genbank:WP_221067719.1;Name=WP_221067719.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332949.1;locus_tag=VA249_RS08790;product=histidinol-phosphate transaminase;protein_id=WP_221067719.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1894222 1895532 . - . ID=gene-VA249_RS08795;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=VA249_RS08795;old_locus_tag=VYA_16440 NZ_AP024165.1 Protein Homology CDS 1894222 1895532 . - 0 ID=cds-WP_221067720.1;Parent=gene-VA249_RS08795;Dbxref=Genbank:WP_221067720.1;Name=WP_221067720.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646125.1;locus_tag=VA249_RS08795;product=histidinol dehydrogenase;protein_id=WP_221067720.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1895538 1896434 . - . ID=gene-VA249_RS08800;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=VA249_RS08800;old_locus_tag=VYA_16450 NZ_AP024165.1 Protein Homology CDS 1895538 1896434 . - 0 ID=cds-WP_211916362.1;Parent=gene-VA249_RS08800;Dbxref=Genbank:WP_211916362.1;Name=WP_211916362.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714239.1;locus_tag=VA249_RS08800;product=ATP phosphoribosyltransferase;protein_id=WP_211916362.1;transl_table=11 NZ_AP024165.1 cmsearch sequence_feature 1896487 1896624 . - . ID=id-NZ_AP024165.1:1896487..1896624;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_AP024165.1 RefSeq gene 1896858 1898294 . - . ID=gene-VA249_RS08805;Name=VA249_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08805;old_locus_tag=VYA_16460 NZ_AP024165.1 Protein Homology CDS 1896858 1898294 . - 0 ID=cds-WP_221067583.1-9;Parent=gene-VA249_RS08805;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS08805;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1898415 1900016 . - . ID=gene-VA249_RS08810;Name=tet(35);gbkey=Gene;gene=tet(35);gene_biotype=protein_coding;locus_tag=VA249_RS08810;old_locus_tag=VYA_16470 NZ_AP024165.1 Protein Homology CDS 1898415 1900016 . - 0 ID=cds-WP_221067721.1;Parent=gene-VA249_RS08810;Dbxref=Genbank:WP_221067721.1;Name=WP_221067721.1;gbkey=CDS;gene=tet(35);inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819526.1;locus_tag=VA249_RS08810;product=tetracycline efflux Na+/H+ antiporter family transporter Tet(35);protein_id=WP_221067721.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 1900125 1900305 . - . ID=id-NZ_AP024165.1:1900125..1900305;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 1901125 1901532 . + . ID=gene-VA249_RS08815;Name=VA249_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08815;old_locus_tag=VYA_16480 NZ_AP024165.1 Protein Homology CDS 1901125 1901532 . + 0 ID=cds-WP_211916360.1;Parent=gene-VA249_RS08815;Dbxref=Genbank:WP_211916360.1;Name=WP_211916360.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460020.1;locus_tag=VA249_RS08815;product=H-NS histone family protein;protein_id=WP_211916360.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1901834 1903138 . - . ID=gene-VA249_RS08820;Name=VA249_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08820;old_locus_tag=VYA_16490 NZ_AP024165.1 Protein Homology CDS 1901834 1903138 . - 0 ID=cds-WP_221067722.1;Parent=gene-VA249_RS08820;Dbxref=Genbank:WP_221067722.1;Name=WP_221067722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010319701.1;locus_tag=VA249_RS08820;product=inosine/guanosine kinase;protein_id=WP_221067722.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1903256 1903525 . - . ID=gene-VA249_RS08825;Name=VA249_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08825;old_locus_tag=VYA_16500 NZ_AP024165.1 Protein Homology CDS 1903256 1903525 . - 0 ID=cds-WP_221067723.1;Parent=gene-VA249_RS08825;Dbxref=Genbank:WP_221067723.1;Name=WP_221067723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439986.1;locus_tag=VA249_RS08825;product=hypothetical protein;protein_id=WP_221067723.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1903714 1904856 . + . ID=gene-VA249_RS08830;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=VA249_RS08830;old_locus_tag=VYA_16510 NZ_AP024165.1 Protein Homology CDS 1903714 1904856 . + 0 ID=cds-WP_128810631.1;Parent=gene-VA249_RS08830;Dbxref=Genbank:WP_128810631.1;Name=WP_128810631.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842629.1;locus_tag=VA249_RS08830;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_128810631.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1904867 1905484 . + . ID=gene-VA249_RS08835;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=VA249_RS08835;old_locus_tag=VYA_16520 NZ_AP024165.1 Protein Homology CDS 1904867 1905484 . + 0 ID=cds-WP_128810630.1;Parent=gene-VA249_RS08835;Dbxref=Genbank:WP_128810630.1;Name=WP_128810630.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017073329.1;locus_tag=VA249_RS08835;product=high frequency lysogenization protein HflD;protein_id=WP_128810630.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1905637 1907007 . + . ID=gene-VA249_RS08840;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=VA249_RS08840;old_locus_tag=VYA_16530 NZ_AP024165.1 Protein Homology CDS 1905637 1907007 . + 0 ID=cds-WP_211916356.1;Parent=gene-VA249_RS08840;Dbxref=Genbank:WP_211916356.1;Name=WP_211916356.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002051747.1;locus_tag=VA249_RS08840;product=adenylosuccinate lyase;protein_id=WP_211916356.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1907099 1907620 . - . ID=gene-VA249_RS08845;Name=VA249_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08845;old_locus_tag=VYA_16540 NZ_AP024165.1 Protein Homology CDS 1907099 1907620 . - 0 ID=cds-WP_221069906.1;Parent=gene-VA249_RS08845;Dbxref=Genbank:WP_221069906.1;Name=WP_221069906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646133.1;locus_tag=VA249_RS08845;product=DUF3833 family protein;protein_id=WP_221069906.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1907635 1908231 . - . ID=gene-VA249_RS08850;Name=VA249_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08850;old_locus_tag=VYA_16550 NZ_AP024165.1 Protein Homology CDS 1907635 1908231 . - 0 ID=cds-WP_221067724.1;Parent=gene-VA249_RS08850;Dbxref=Genbank:WP_221067724.1;Name=WP_221067724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188200.1;locus_tag=VA249_RS08850;product=chalcone isomerase family protein;protein_id=WP_221067724.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1908191 1908703 . - . ID=gene-VA249_RS08855;Name=VA249_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08855 NZ_AP024165.1 Protein Homology CDS 1908191 1908703 . - 0 ID=cds-WP_221067725.1;Parent=gene-VA249_RS08855;Dbxref=Genbank:WP_221067725.1;Name=WP_221067725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378203.1;locus_tag=VA249_RS08855;product=DUF2878 family protein;protein_id=WP_221067725.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1908709 1909965 . - . ID=gene-VA249_RS08860;Name=VA249_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08860;old_locus_tag=VYA_16580 NZ_AP024165.1 Protein Homology CDS 1908709 1909965 . - 0 ID=cds-WP_221067726.1;Parent=gene-VA249_RS08860;Dbxref=Genbank:WP_221067726.1;Name=WP_221067726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821710.1;locus_tag=VA249_RS08860;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_221067726.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1909959 1910777 . - . ID=gene-VA249_RS08865;Name=VA249_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08865;old_locus_tag=VYA_16590 NZ_AP024165.1 Protein Homology CDS 1909959 1910777 . - 0 ID=cds-WP_221067727.1;Parent=gene-VA249_RS08865;Dbxref=Genbank:WP_221067727.1;Name=WP_221067727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378205.1;locus_tag=VA249_RS08865;product=DUF1365 family protein;protein_id=WP_221067727.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1910779 1912089 . - . ID=gene-VA249_RS08870;Name=VA249_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08870;old_locus_tag=VYA_16600 NZ_AP024165.1 Protein Homology CDS 1910779 1912089 . - 0 ID=cds-WP_221067728.1;Parent=gene-VA249_RS08870;Dbxref=Genbank:WP_221067728.1;Name=WP_221067728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819150.1;locus_tag=VA249_RS08870;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_221067728.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1912101 1912826 . - . ID=gene-VA249_RS08875;Name=VA249_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08875;old_locus_tag=VYA_16610 NZ_AP024165.1 Protein Homology CDS 1912101 1912826 . - 0 ID=cds-WP_211916350.1;Parent=gene-VA249_RS08875;Dbxref=Genbank:WP_211916350.1;Name=WP_211916350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528835.1;locus_tag=VA249_RS08875;product=SDR family oxidoreductase;protein_id=WP_211916350.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1912823 1913242 . - . ID=gene-VA249_RS08880;Name=VA249_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08880;old_locus_tag=VYA_16620 NZ_AP024165.1 Protein Homology CDS 1912823 1913242 . - 0 ID=cds-WP_128810626.1;Parent=gene-VA249_RS08880;Dbxref=Genbank:WP_128810626.1;Name=WP_128810626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528838.1;locus_tag=VA249_RS08880;product=nuclear transport factor 2 family protein;protein_id=WP_128810626.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1913469 1914338 . - . ID=gene-VA249_RS08885;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=VA249_RS08885;old_locus_tag=VYA_16630 NZ_AP024165.1 Protein Homology CDS 1913469 1914338 . - 0 ID=cds-WP_128810625.1;Parent=gene-VA249_RS08885;Dbxref=Genbank:WP_128810625.1;Name=WP_128810625.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528841.1;locus_tag=VA249_RS08885;product=protease HtpX;protein_id=WP_128810625.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1914643 1914810 . + . ID=gene-VA249_RS08890;Name=VA249_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08890;old_locus_tag=VYA_16640 NZ_AP024165.1 Protein Homology CDS 1914643 1914810 . + 0 ID=cds-WP_010449198.1;Parent=gene-VA249_RS08890;Dbxref=Genbank:WP_010449198.1;Name=WP_010449198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528842.1;locus_tag=VA249_RS08890;product=hypothetical protein;protein_id=WP_010449198.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1914884 1916194 . - . ID=gene-VA249_RS08895;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=VA249_RS08895 NZ_AP024165.1 Protein Homology CDS 1914884 1916194 . - 0 ID=cds-WP_225927125.1;Parent=gene-VA249_RS08895;Dbxref=Genbank:WP_225927125.1;Name=WP_225927125.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381813.1;locus_tag=VA249_RS08895;product=group II intron reverse transcriptase/maturase;protein_id=WP_225927125.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1916795 1917478 . - . ID=gene-VA249_RS08900;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=VA249_RS08900;old_locus_tag=VYA_16650 NZ_AP024165.1 Protein Homology CDS 1916795 1917478 . - 0 ID=cds-WP_211916348.1;Parent=gene-VA249_RS08900;Dbxref=Genbank:WP_211916348.1;Name=WP_211916348.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528844.1;locus_tag=VA249_RS08900;product=dethiobiotin synthase;protein_id=WP_211916348.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1917475 1918281 . - . ID=gene-VA249_RS08905;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=VA249_RS08905;old_locus_tag=VYA_16660 NZ_AP024165.1 Protein Homology CDS 1917475 1918281 . - 0 ID=cds-WP_221067729.1;Parent=gene-VA249_RS08905;Dbxref=Genbank:WP_221067729.1;Name=WP_221067729.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448316.1;locus_tag=VA249_RS08905;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_221067729.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1918281 1919432 . - . ID=gene-VA249_RS08910;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=VA249_RS08910;old_locus_tag=VYA_16670 NZ_AP024165.1 Protein Homology CDS 1918281 1919432 . - 0 ID=cds-WP_221067730.1;Parent=gene-VA249_RS08910;Dbxref=Genbank:WP_221067730.1;Name=WP_221067730.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005390823.1;locus_tag=VA249_RS08910;product=8-amino-7-oxononanoate synthase;protein_id=WP_221067730.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1919419 1920471 . - . ID=gene-VA249_RS08915;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=VA249_RS08915;old_locus_tag=VYA_16680 NZ_AP024165.1 Protein Homology CDS 1919419 1920471 . - 0 ID=cds-WP_221067731.1;Parent=gene-VA249_RS08915;Dbxref=Genbank:WP_221067731.1;Name=WP_221067731.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460014.1;locus_tag=VA249_RS08915;product=biotin synthase BioB;protein_id=WP_221067731.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1920601 1921878 . + . ID=gene-VA249_RS08920;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=VA249_RS08920;old_locus_tag=VYA_16690 NZ_AP024165.1 Protein Homology CDS 1920601 1921878 . + 0 ID=cds-WP_221067732.1;Parent=gene-VA249_RS08920;Dbxref=Genbank:WP_221067732.1;Name=WP_221067732.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646152.1;locus_tag=VA249_RS08920;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_221067732.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1921998 1922264 . - . ID=gene-VA249_RS08925;Name=VA249_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08925;old_locus_tag=VYA_16700 NZ_AP024165.1 Protein Homology CDS 1921998 1922264 . - 0 ID=cds-WP_221067733.1;Parent=gene-VA249_RS08925;Dbxref=Genbank:WP_221067733.1;Name=WP_221067733.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528852.1;locus_tag=VA249_RS08925;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_221067733.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1922460 1923767 . - . ID=gene-VA249_RS08930;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=VA249_RS08930;old_locus_tag=VYA_16710 NZ_AP024165.1 Protein Homology CDS 1922460 1923767 . - 0 ID=cds-WP_221067734.1;Parent=gene-VA249_RS08930;Dbxref=Genbank:WP_221067734.1;Name=WP_221067734.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127605.1;locus_tag=VA249_RS08930;product=serine--tRNA ligase;protein_id=WP_221067734.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 1923858 1925206 . - . ID=gene-VA249_RS08935;Name=VA249_RS08935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS08935;old_locus_tag=VYA_16720;pseudo=true NZ_AP024165.1 Protein Homology CDS 1923858 1925206 . - 0 ID=cds-VA249_RS08935;Parent=gene-VA249_RS08935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073973.1;locus_tag=VA249_RS08935;product=replication-associated recombination protein A;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 1925213 1925839 . - . ID=gene-VA249_RS08940;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=VA249_RS08940;old_locus_tag=VYA_16730 NZ_AP024165.1 Protein Homology CDS 1925213 1925839 . - 0 ID=cds-WP_221067735.1;Parent=gene-VA249_RS08940;Dbxref=Genbank:WP_221067735.1;Name=WP_221067735.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634949.1;locus_tag=VA249_RS08940;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_221067735.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1925913 1929173 . - . ID=gene-VA249_RS08945;Name=VA249_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08945;old_locus_tag=VYA_16740 NZ_AP024165.1 Protein Homology CDS 1925913 1929173 . - 0 ID=cds-WP_221067736.1;Parent=gene-VA249_RS08945;Dbxref=Genbank:WP_221067736.1;Name=WP_221067736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698197.1;locus_tag=VA249_RS08945;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_221067736.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1929325 1929819 . - . ID=gene-VA249_RS08950;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=VA249_RS08950;old_locus_tag=VYA_16750 NZ_AP024165.1 Protein Homology CDS 1929325 1929819 . - 0 ID=cds-WP_005437169.1;Parent=gene-VA249_RS08950;Dbxref=Genbank:WP_005437169.1;Name=WP_005437169.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004406045.1;locus_tag=VA249_RS08950;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_005437169.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1929976 1931100 . + . ID=gene-VA249_RS08955;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=VA249_RS08955;old_locus_tag=VYA_16760 NZ_AP024165.1 Protein Homology CDS 1929976 1931100 . + 0 ID=cds-WP_221067737.1;Parent=gene-VA249_RS08955;Dbxref=Genbank:WP_221067737.1;Name=WP_221067737.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020430013.1;locus_tag=VA249_RS08955;product=alanine dehydrogenase;protein_id=WP_221067737.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1931193 1932389 . - . ID=gene-VA249_RS08960;Name=VA249_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08960;old_locus_tag=VYA_16770 NZ_AP024165.1 Protein Homology CDS 1931193 1932389 . - 0 ID=cds-WP_221067738.1;Parent=gene-VA249_RS08960;Dbxref=Genbank:WP_221067738.1;Name=WP_221067738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378243.1;locus_tag=VA249_RS08960;product=methyltransferase;protein_id=WP_221067738.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1932446 1933420 . - . ID=gene-VA249_RS08965;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=VA249_RS08965;old_locus_tag=VYA_16780 NZ_AP024165.1 Protein Homology CDS 1932446 1933420 . - 0 ID=cds-WP_221067739.1;Parent=gene-VA249_RS08965;Dbxref=Genbank:WP_221067739.1;Name=WP_221067739.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127599.1;locus_tag=VA249_RS08965;product=HTH-type transcriptional regulator CysB;protein_id=WP_221067739.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1933767 1934531 . + . ID=gene-VA249_RS08970;Name=VA249_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08970;old_locus_tag=VYA_16790 NZ_AP024165.1 Protein Homology CDS 1933767 1934531 . + 0 ID=cds-WP_128810613.1;Parent=gene-VA249_RS08970;Dbxref=Genbank:WP_128810613.1;Name=WP_128810613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439937.1;locus_tag=VA249_RS08970;product=DNA repair protein;protein_id=WP_128810613.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1934665 1935435 . + . ID=gene-VA249_RS08975;Name=VA249_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08975;old_locus_tag=VYA_16800 NZ_AP024165.1 Protein Homology CDS 1934665 1935435 . + 0 ID=cds-WP_221067740.1;Parent=gene-VA249_RS08975;Dbxref=Genbank:WP_221067740.1;Name=WP_221067740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005437159.1;locus_tag=VA249_RS08975;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_221067740.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1935974 1936852 . + . ID=gene-VA249_RS08980;Name=VA249_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08980;old_locus_tag=VYA_16810 NZ_AP024165.1 Protein Homology CDS 1935974 1936852 . + 0 ID=cds-WP_128810611.1;Parent=gene-VA249_RS08980;Dbxref=Genbank:WP_128810611.1;Name=WP_128810611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005388501.1;locus_tag=VA249_RS08980;product=NAD(P)-dependent oxidoreductase;protein_id=WP_128810611.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1937044 1937976 . + . ID=gene-VA249_RS08985;Name=VA249_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08985;old_locus_tag=VYA_16820 NZ_AP024165.1 Protein Homology CDS 1937044 1937976 . + 0 ID=cds-WP_221067741.1;Parent=gene-VA249_RS08985;Dbxref=Genbank:WP_221067741.1;Name=WP_221067741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186333.1;locus_tag=VA249_RS08985;product=alpha/beta hydrolase;protein_id=WP_221067741.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1938131 1939888 . - . ID=gene-VA249_RS08990;Name=VA249_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08990;old_locus_tag=VYA_16830 NZ_AP024165.1 Protein Homology CDS 1938131 1939888 . - 0 ID=cds-WP_128810610.1;Parent=gene-VA249_RS08990;Dbxref=Genbank:WP_128810610.1;Name=WP_128810610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821226.1;locus_tag=VA249_RS08990;product=transporter;protein_id=WP_128810610.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1940252 1941688 . + . ID=gene-VA249_RS08995;Name=VA249_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS08995;old_locus_tag=VYA_16840 NZ_AP024165.1 Protein Homology CDS 1940252 1941688 . + 0 ID=cds-WP_221067583.1-10;Parent=gene-VA249_RS08995;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS08995;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1941828 1942451 . - . ID=gene-VA249_RS09000;Name=VA249_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09000;old_locus_tag=VYA_16850 NZ_AP024165.1 Protein Homology CDS 1941828 1942451 . - 0 ID=cds-WP_005388506.1;Parent=gene-VA249_RS09000;Dbxref=Genbank:WP_005388506.1;Name=WP_005388506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005388506.1;locus_tag=VA249_RS09000;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_005388506.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1942530 1943462 . - . ID=gene-VA249_RS09005;Name=VA249_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09005;old_locus_tag=VYA_16860 NZ_AP024165.1 Protein Homology CDS 1942530 1943462 . - 0 ID=cds-WP_221067742.1;Parent=gene-VA249_RS09005;Dbxref=Genbank:WP_221067742.1;Name=WP_221067742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016791254.1;locus_tag=VA249_RS09005;product=sugar kinase;protein_id=WP_221067742.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1943497 1943832 . - . ID=gene-VA249_RS09010;Name=VA249_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09010;old_locus_tag=VYA_16870 NZ_AP024165.1 Protein Homology CDS 1943497 1943832 . - 0 ID=cds-WP_221067743.1;Parent=gene-VA249_RS09010;Dbxref=Genbank:WP_221067743.1;Name=WP_221067743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450851.1;locus_tag=VA249_RS09010;product=cupin domain-containing protein;protein_id=WP_221067743.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1944224 1946407 . + . ID=gene-VA249_RS09015;Name=VA249_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09015;old_locus_tag=VYA_16880 NZ_AP024165.1 Protein Homology CDS 1944224 1946407 . + 0 ID=cds-WP_221067744.1;Parent=gene-VA249_RS09015;Dbxref=Genbank:WP_221067744.1;Name=WP_221067744.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821224.1;locus_tag=VA249_RS09015;product=heparinase II/III family protein;protein_id=WP_221067744.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1946410 1948575 . + . ID=gene-VA249_RS09020;Name=VA249_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09020;old_locus_tag=VYA_16890 NZ_AP024165.1 Protein Homology CDS 1946410 1948575 . + 0 ID=cds-WP_221067745.1;Parent=gene-VA249_RS09020;Dbxref=Genbank:WP_221067745.1;Name=WP_221067745.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821223.1;locus_tag=VA249_RS09020;product=heparinase II/III family protein;protein_id=WP_221067745.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1948923 1949393 . + . ID=gene-VA249_RS09025;Name=VA249_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09025;old_locus_tag=VYA_16900 NZ_AP024165.1 Protein Homology CDS 1948923 1949393 . + 0 ID=cds-WP_221067746.1;Parent=gene-VA249_RS09025;Dbxref=Genbank:WP_221067746.1;Name=WP_221067746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714283.1;locus_tag=VA249_RS09025;product=YhcH/YjgK/YiaL family protein;protein_id=WP_221067746.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1949470 1950759 . - . ID=gene-VA249_RS09030;Name=VA249_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09030;old_locus_tag=VYA_16910 NZ_AP024165.1 Protein Homology CDS 1949470 1950759 . - 0 ID=cds-WP_242598068.1;Parent=gene-VA249_RS09030;Dbxref=Genbank:WP_242598068.1;Name=WP_242598068.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698212.1;locus_tag=VA249_RS09030;product=MATE family efflux transporter;protein_id=WP_242598068.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1950968 1951684 . - . ID=gene-VA249_RS09035;Name=VA249_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09035;old_locus_tag=VYA_16920 NZ_AP024165.1 Protein Homology CDS 1950968 1951684 . - 0 ID=cds-WP_221067748.1;Parent=gene-VA249_RS09035;Dbxref=Genbank:WP_221067748.1;Name=WP_221067748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634231.1;locus_tag=VA249_RS09035;product=FadR family transcriptional regulator;protein_id=WP_221067748.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1952068 1952787 . + . ID=gene-VA249_RS09040;Name=VA249_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09040;old_locus_tag=VYA_16930 NZ_AP024165.1 Protein Homology CDS 1952068 1952787 . + 0 ID=cds-WP_128810602.1;Parent=gene-VA249_RS09040;Dbxref=Genbank:WP_128810602.1;Name=WP_128810602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010438385.1;locus_tag=VA249_RS09040;product=FadR family transcriptional regulator;protein_id=WP_128810602.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1953002 1954864 . + . ID=gene-VA249_RS09045;Name=VA249_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09045;old_locus_tag=VYA_16940 NZ_AP024165.1 Protein Homology CDS 1953002 1954864 . + 0 ID=cds-WP_221067749.1;Parent=gene-VA249_RS09045;Dbxref=Genbank:WP_221067749.1;Name=WP_221067749.1;Ontology_term=GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017069961.1;locus_tag=VA249_RS09045;product=DUF294 nucleotidyltransferase-like domain-containing protein;protein_id=WP_221067749.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1954864 1955580 . + . ID=gene-VA249_RS09050;Name=VA249_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09050;old_locus_tag=VYA_16950 NZ_AP024165.1 Protein Homology CDS 1954864 1955580 . + 0 ID=cds-WP_221067750.1;Parent=gene-VA249_RS09050;Dbxref=Genbank:WP_221067750.1;Name=WP_221067750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005437097.1;locus_tag=VA249_RS09050;product=3'-5' exonuclease;protein_id=WP_221067750.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1955601 1956479 . + . ID=gene-VA249_RS09055;Name=VA249_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09055;old_locus_tag=VYA_16960 NZ_AP024165.1 Protein Homology CDS 1955601 1956479 . + 0 ID=cds-WP_221067751.1;Parent=gene-VA249_RS09055;Dbxref=Genbank:WP_221067751.1;Name=WP_221067751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017065985.1;locus_tag=VA249_RS09055;product=DMT family transporter;protein_id=WP_221067751.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1956611 1957327 . - . ID=gene-VA249_RS09060;Name=VA249_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09060;old_locus_tag=VYA_16970 NZ_AP024165.1 Protein Homology CDS 1956611 1957327 . - 0 ID=cds-WP_221067752.1;Parent=gene-VA249_RS09060;Dbxref=Genbank:WP_221067752.1;Name=WP_221067752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195684.1;locus_tag=VA249_RS09060;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_221067752.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1957397 1958656 . - . ID=gene-VA249_RS09065;Name=VA249_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09065;old_locus_tag=VYA_16980 NZ_AP024165.1 Protein Homology CDS 1957397 1958656 . - 0 ID=cds-WP_221067753.1;Parent=gene-VA249_RS09065;Dbxref=Genbank:WP_221067753.1;Name=WP_221067753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819117.1;locus_tag=VA249_RS09065;product=alginate lyase family protein;protein_id=WP_221067753.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1959687 1961465 . + . ID=gene-VA249_RS09070;Name=VA249_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09070;old_locus_tag=VYA_17000 NZ_AP024165.1 Protein Homology CDS 1959687 1961465 . + 0 ID=cds-WP_221067754.1;Parent=gene-VA249_RS09070;Dbxref=Genbank:WP_221067754.1;Name=WP_221067754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016768627.1;locus_tag=VA249_RS09070;product=Na+:solute symporter;protein_id=WP_221067754.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1961878 1963665 . + . ID=gene-VA249_RS09075;Name=VA249_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09075;old_locus_tag=VYA_17010 NZ_AP024165.1 Protein Homology CDS 1961878 1963665 . + 0 ID=cds-WP_221067755.1;Parent=gene-VA249_RS09075;Dbxref=Genbank:WP_221067755.1;Name=WP_221067755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698217.1;locus_tag=VA249_RS09075;product=transporter;protein_id=WP_221067755.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1963724 1965340 . + . ID=gene-VA249_RS09080;Name=VA249_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09080;old_locus_tag=VYA_17020 NZ_AP024165.1 Protein Homology CDS 1963724 1965340 . + 0 ID=cds-WP_221067756.1;Parent=gene-VA249_RS09080;Dbxref=Genbank:WP_221067756.1;Name=WP_221067756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016785035.1;locus_tag=VA249_RS09080;product=polysaccharide lyase 6 family protein;protein_id=WP_221067756.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1965519 1966475 . + . ID=gene-VA249_RS09085;Name=VA249_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09085;old_locus_tag=VYA_17030 NZ_AP024165.1 Protein Homology CDS 1965519 1966475 . + 0 ID=cds-WP_221069909.1;Parent=gene-VA249_RS09085;Dbxref=Genbank:WP_221069909.1;Name=WP_221069909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195677.1;locus_tag=VA249_RS09085;product=AEC family transporter;protein_id=WP_221069909.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1966512 1966964 . - . ID=gene-VA249_RS09090;Name=VA249_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09090;old_locus_tag=VYA_17040 NZ_AP024165.1 Protein Homology CDS 1966512 1966964 . - 0 ID=cds-WP_221067757.1;Parent=gene-VA249_RS09090;Dbxref=Genbank:WP_221067757.1;Name=WP_221067757.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005437051.1;locus_tag=VA249_RS09090;product=MarR family transcriptional regulator;protein_id=WP_221067757.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1967335 1970496 . - . ID=gene-VA249_RS09095;Name=VA249_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09095;old_locus_tag=VYA_17050 NZ_AP024165.1 Protein Homology CDS 1967335 1970496 . - 0 ID=cds-WP_221067758.1;Parent=gene-VA249_RS09095;Dbxref=Genbank:WP_221067758.1;Name=WP_221067758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127569.1;locus_tag=VA249_RS09095;product=efflux RND transporter permease subunit;protein_id=WP_221067758.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1970499 1971635 . - . ID=gene-VA249_RS09100;Name=VA249_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09100;old_locus_tag=VYA_17060 NZ_AP024165.1 Protein Homology CDS 1970499 1971635 . - 0 ID=cds-WP_221067759.1;Parent=gene-VA249_RS09100;Dbxref=Genbank:WP_221067759.1;Name=WP_221067759.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528900.1;locus_tag=VA249_RS09100;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221067759.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1972091 1972714 . + . ID=gene-VA249_RS09105;Name=VA249_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09105;old_locus_tag=VYA_17070 NZ_AP024165.1 Protein Homology CDS 1972091 1972714 . + 0 ID=cds-WP_221067760.1;Parent=gene-VA249_RS09105;Dbxref=Genbank:WP_221067760.1;Name=WP_221067760.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195665.1;locus_tag=VA249_RS09105;product=winged helix-turn-helix domain-containing protein;protein_id=WP_221067760.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1973184 1973519 . - . ID=gene-VA249_RS09110;Name=VA249_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09110;old_locus_tag=VYA_17080 NZ_AP024165.1 Protein Homology CDS 1973184 1973519 . - 0 ID=cds-WP_221067761.1;Parent=gene-VA249_RS09110;Dbxref=Genbank:WP_221067761.1;Name=WP_221067761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698244.1;locus_tag=VA249_RS09110;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_221067761.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1973731 1974372 . - . ID=gene-VA249_RS09115;Name=VA249_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09115;old_locus_tag=VYA_17090 NZ_AP024165.1 Protein Homology CDS 1973731 1974372 . - 0 ID=cds-WP_221067762.1;Parent=gene-VA249_RS09115;Dbxref=Genbank:WP_221067762.1;Name=WP_221067762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431365.1;locus_tag=VA249_RS09115;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_221067762.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1975183 1975482 . - . ID=gene-VA249_RS09120;Name=VA249_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09120;old_locus_tag=VYA_17110 NZ_AP024165.1 GeneMarkS-2+ CDS 1975183 1975482 . - 0 ID=cds-WP_221067763.1;Parent=gene-VA249_RS09120;Dbxref=Genbank:WP_221067763.1;Name=WP_221067763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09120;product=hypothetical protein;protein_id=WP_221067763.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1975686 1976195 . + . ID=gene-VA249_RS09125;Name=VA249_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09125;old_locus_tag=VYA_17120 NZ_AP024165.1 Protein Homology CDS 1975686 1976195 . + 0 ID=cds-WP_221067764.1;Parent=gene-VA249_RS09125;Dbxref=Genbank:WP_221067764.1;Name=WP_221067764.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449888.1;locus_tag=VA249_RS09125;product=MerR family transcriptional regulator;protein_id=WP_221067764.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1976613 1977836 . - . ID=gene-VA249_RS09130;Name=VA249_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09130;old_locus_tag=VYA_17130 NZ_AP024165.1 GeneMarkS-2+ CDS 1976613 1977836 . - 0 ID=cds-WP_221067765.1;Parent=gene-VA249_RS09130;Dbxref=Genbank:WP_221067765.1;Name=WP_221067765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09130;product=hypothetical protein;protein_id=WP_221067765.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1977817 1978380 . - . ID=gene-VA249_RS09135;Name=VA249_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09135;old_locus_tag=VYA_17140 NZ_AP024165.1 GeneMarkS-2+ CDS 1977817 1978380 . - 0 ID=cds-WP_221067766.1;Parent=gene-VA249_RS09135;Dbxref=Genbank:WP_221067766.1;Name=WP_221067766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09135;product=hypothetical protein;protein_id=WP_221067766.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1978377 1982810 . - . ID=gene-VA249_RS09140;Name=VA249_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09140;old_locus_tag=VYA_17150 NZ_AP024165.1 Protein Homology CDS 1978377 1982810 . - 0 ID=cds-WP_221067767.1;Parent=gene-VA249_RS09140;Dbxref=Genbank:WP_221067767.1;Name=WP_221067767.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012492.2;locus_tag=VA249_RS09140;product=DEAD/DEAH box helicase;protein_id=WP_221067767.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1982810 1983544 . - . ID=gene-VA249_RS09145;Name=VA249_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09145;old_locus_tag=VYA_17160 NZ_AP024165.1 GeneMarkS-2+ CDS 1982810 1983544 . - 0 ID=cds-WP_221067768.1;Parent=gene-VA249_RS09145;Dbxref=Genbank:WP_221067768.1;Name=WP_221067768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09145;product=hypothetical protein;protein_id=WP_221067768.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1983534 1986629 . - . ID=gene-VA249_RS09150;Name=VA249_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09150;old_locus_tag=VYA_17170 NZ_AP024165.1 GeneMarkS-2+ CDS 1983534 1986629 . - 0 ID=cds-WP_221067769.1;Parent=gene-VA249_RS09150;Dbxref=Genbank:WP_221067769.1;Name=WP_221067769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09150;product=hypothetical protein;protein_id=WP_221067769.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1986743 1987762 . - . ID=gene-VA249_RS09155;Name=VA249_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09155;old_locus_tag=VYA_17180 NZ_AP024165.1 GeneMarkS-2+ CDS 1986743 1987762 . - 0 ID=cds-WP_221067770.1;Parent=gene-VA249_RS09155;Dbxref=Genbank:WP_221067770.1;Name=WP_221067770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09155;product=hypothetical protein;protein_id=WP_221067770.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1987765 1990176 . - . ID=gene-VA249_RS09160;Name=VA249_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09160;old_locus_tag=VYA_17190 NZ_AP024165.1 Protein Homology CDS 1987765 1990176 . - 0 ID=cds-WP_221067771.1;Parent=gene-VA249_RS09160;Dbxref=Genbank:WP_221067771.1;Name=WP_221067771.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012492.2;locus_tag=VA249_RS09160;product=DEAD/DEAH box helicase;protein_id=WP_221067771.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1990179 1993268 . - . ID=gene-VA249_RS09165;Name=VA249_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09165;old_locus_tag=VYA_17200 NZ_AP024165.1 Protein Homology CDS 1990179 1993268 . - 0 ID=cds-WP_221067772.1;Parent=gene-VA249_RS09165;Dbxref=Genbank:WP_221067772.1;Name=WP_221067772.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: protein motif:HMM:NF012403.2;locus_tag=VA249_RS09165;product=SNF2-related protein;protein_id=WP_221067772.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1993690 1994304 . - . ID=gene-VA249_RS09170;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=VA249_RS09170;old_locus_tag=VYA_17210 NZ_AP024165.1 Protein Homology CDS 1993690 1994304 . - 0 ID=cds-WP_221067773.1;Parent=gene-VA249_RS09170;Dbxref=Genbank:WP_221067773.1;Name=WP_221067773.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006232024.1;locus_tag=VA249_RS09170;product=GTP cyclohydrolase I FolE;protein_id=WP_221067773.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1994309 1994980 . - . ID=gene-VA249_RS09175;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=VA249_RS09175;old_locus_tag=VYA_17220 NZ_AP024165.1 Protein Homology CDS 1994309 1994980 . - 0 ID=cds-WP_221067774.1;Parent=gene-VA249_RS09175;Dbxref=Genbank:WP_221067774.1;Name=WP_221067774.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006962109.1;locus_tag=VA249_RS09175;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_221067774.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1994994 1995659 . - . ID=gene-VA249_RS09180;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=VA249_RS09180;old_locus_tag=VYA_17230 NZ_AP024165.1 Protein Homology CDS 1994994 1995659 . - 0 ID=cds-WP_221067775.1;Parent=gene-VA249_RS09180;Dbxref=Genbank:WP_221067775.1;Name=WP_221067775.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001927723.1;locus_tag=VA249_RS09180;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_221067775.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1995643 1996758 . - . ID=gene-VA249_RS09185;Name=VA249_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09185;old_locus_tag=VYA_17240 NZ_AP024165.1 Protein Homology CDS 1995643 1996758 . - 0 ID=cds-WP_221067776.1;Parent=gene-VA249_RS09185;Dbxref=Genbank:WP_221067776.1;Name=WP_221067776.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025438.2;locus_tag=VA249_RS09185;product=DGQHR domain-containing protein;protein_id=WP_221067776.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1996755 1997972 . - . ID=gene-VA249_RS09190;Name=VA249_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09190;old_locus_tag=VYA_17250 NZ_AP024165.1 GeneMarkS-2+ CDS 1996755 1997972 . - 0 ID=cds-WP_221067777.1;Parent=gene-VA249_RS09190;Dbxref=Genbank:WP_221067777.1;Name=WP_221067777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09190;product=hypothetical protein;protein_id=WP_221067777.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1998075 1999010 . + . ID=gene-VA249_RS09195;Name=VA249_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09195;old_locus_tag=VYA_17260 NZ_AP024165.1 GeneMarkS-2+ CDS 1998075 1999010 . + 0 ID=cds-WP_221067778.1;Parent=gene-VA249_RS09195;Dbxref=Genbank:WP_221067778.1;Name=WP_221067778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09195;product=hypothetical protein;protein_id=WP_221067778.1;transl_table=11 NZ_AP024165.1 RefSeq gene 1999007 2000398 . + . ID=gene-VA249_RS09200;Name=VA249_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09200;old_locus_tag=VYA_17270 NZ_AP024165.1 Protein Homology CDS 1999007 2000398 . + 0 ID=cds-WP_221067779.1;Parent=gene-VA249_RS09200;Dbxref=Genbank:WP_221067779.1;Name=WP_221067779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016795638.1;locus_tag=VA249_RS09200;product=hypothetical protein;protein_id=WP_221067779.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2000402 2001619 . + . ID=gene-VA249_RS09205;Name=VA249_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09205;old_locus_tag=VYA_17280 NZ_AP024165.1 Protein Homology CDS 2000402 2001619 . + 0 ID=cds-WP_221067780.1;Parent=gene-VA249_RS09205;Dbxref=Genbank:WP_221067780.1;Name=WP_221067780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016795639.1;locus_tag=VA249_RS09205;product=DGQHR domain-containing protein;protein_id=WP_221067780.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2001654 2001896 . - . ID=gene-VA249_RS09210;Name=VA249_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09210;old_locus_tag=VYA_17290 NZ_AP024165.1 GeneMarkS-2+ CDS 2001654 2001896 . - 0 ID=cds-WP_221067781.1;Parent=gene-VA249_RS09210;Dbxref=Genbank:WP_221067781.1;Name=WP_221067781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09210;product=hypothetical protein;protein_id=WP_221067781.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2002064 2002942 . + . ID=gene-VA249_RS09215;Name=VA249_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09215;old_locus_tag=VYA_17300 NZ_AP024165.1 Protein Homology CDS 2002064 2002942 . + 0 ID=cds-WP_221067782.1;Parent=gene-VA249_RS09215;Dbxref=Genbank:WP_221067782.1;Name=WP_221067782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004732747.1;locus_tag=VA249_RS09215;product=6-carboxytetrahydropterin synthase;protein_id=WP_221067782.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 2003334 2004119 . - . ID=gene-VA249_RS09220;Name=VA249_RS09220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS09220;partial=true;pseudo=true;start_range=.,2003334 NZ_AP024165.1 Protein Homology CDS 2003334 2004119 . - 0 ID=cds-VA249_RS09220;Parent=gene-VA249_RS09220;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006071221.1;locus_tag=VA249_RS09220;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,2003334;transl_table=11 NZ_AP024165.1 RefSeq gene 2004324 2005280 . + . ID=gene-VA249_RS09225;Name=VA249_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09225;old_locus_tag=VYA_17330 NZ_AP024165.1 Protein Homology CDS 2004324 2005280 . + 0 ID=cds-WP_221069912.1;Parent=gene-VA249_RS09225;Dbxref=Genbank:WP_221069912.1;Name=WP_221069912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017065916.1;locus_tag=VA249_RS09225;product=hypothetical protein;protein_id=WP_221069912.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2005304 2005891 . + . ID=gene-VA249_RS09230;Name=VA249_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09230;old_locus_tag=VYA_17340 NZ_AP024165.1 Protein Homology CDS 2005304 2005891 . + 0 ID=cds-WP_221067783.1;Parent=gene-VA249_RS09230;Dbxref=Genbank:WP_221067783.1;Name=WP_221067783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004395806.1;locus_tag=VA249_RS09230;product=methyltransferase domain-containing protein;protein_id=WP_221067783.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2005905 2008796 . + . ID=gene-VA249_RS09235;Name=VA249_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09235;old_locus_tag=VYA_17350 NZ_AP024165.1 Protein Homology CDS 2005905 2008796 . + 0 ID=cds-WP_221067784.1;Parent=gene-VA249_RS09235;Dbxref=Genbank:WP_221067784.1;Name=WP_221067784.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013571432.1;locus_tag=VA249_RS09235;product=DEAD/DEAH box helicase family protein;protein_id=WP_221067784.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2008835 2009851 . - . ID=gene-VA249_RS09240;Name=VA249_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09240;old_locus_tag=VYA_17360 NZ_AP024165.1 Protein Homology CDS 2008835 2009851 . - 0 ID=cds-WP_221067785.1;Parent=gene-VA249_RS09240;Dbxref=Genbank:WP_221067785.1;Name=WP_221067785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025454.2;locus_tag=VA249_RS09240;product=DUF4268 domain-containing protein;protein_id=WP_221067785.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2010091 2010426 . - . ID=gene-VA249_RS09245;Name=VA249_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09245;old_locus_tag=VYA_17370 NZ_AP024165.1 GeneMarkS-2+ CDS 2010091 2010426 . - 0 ID=cds-WP_221067786.1;Parent=gene-VA249_RS09245;Dbxref=Genbank:WP_221067786.1;Name=WP_221067786.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09245;product=hypothetical protein;protein_id=WP_221067786.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2010481 2011758 . - . ID=gene-VA249_RS09250;Name=VA249_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09250;old_locus_tag=VYA_17380 NZ_AP024165.1 Protein Homology CDS 2010481 2011758 . - 0 ID=cds-WP_221067787.1;Parent=gene-VA249_RS09250;Dbxref=Genbank:WP_221067787.1;Name=WP_221067787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.2;locus_tag=VA249_RS09250;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_221067787.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2011819 2012505 . - . ID=gene-VA249_RS09255;Name=VA249_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09255;old_locus_tag=VYA_17390 NZ_AP024165.1 GeneMarkS-2+ CDS 2011819 2012505 . - 0 ID=cds-WP_221067788.1;Parent=gene-VA249_RS09255;Dbxref=Genbank:WP_221067788.1;Name=WP_221067788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09255;product=hypothetical protein;protein_id=WP_221067788.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2012628 2014220 . - . ID=gene-VA249_RS09260;Name=VA249_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09260;old_locus_tag=VYA_17400 NZ_AP024165.1 Protein Homology CDS 2012628 2014220 . - 0 ID=cds-WP_221067789.1;Parent=gene-VA249_RS09260;Dbxref=Genbank:WP_221067789.1;Name=WP_221067789.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025027.2;locus_tag=VA249_RS09260;product=DUF4145 domain-containing protein;protein_id=WP_221067789.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2014315 2015331 . + . ID=gene-VA249_RS09265;Name=VA249_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09265;old_locus_tag=VYA_17410 NZ_AP024165.1 Protein Homology CDS 2014315 2015331 . + 0 ID=cds-WP_221067790.1;Parent=gene-VA249_RS09265;Dbxref=Genbank:WP_221067790.1;Name=WP_221067790.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024676.2;locus_tag=VA249_RS09265;product=WYL domain-containing protein;protein_id=WP_221067790.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2015414 2015935 . - . ID=gene-VA249_RS09270;Name=VA249_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09270;old_locus_tag=VYA_17420 NZ_AP024165.1 Protein Homology CDS 2015414 2015935 . - 0 ID=cds-WP_221067791.1;Parent=gene-VA249_RS09270;Dbxref=Genbank:WP_221067791.1;Name=WP_221067791.1;Ontology_term=GO:0038023,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151711.1;locus_tag=VA249_RS09270;product=opioid growth factor receptor-related protein;protein_id=WP_221067791.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2015981 2016580 . - . ID=gene-VA249_RS09275;Name=VA249_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09275;old_locus_tag=VYA_17430 NZ_AP024165.1 GeneMarkS-2+ CDS 2015981 2016580 . - 0 ID=cds-WP_221067792.1;Parent=gene-VA249_RS09275;Dbxref=Genbank:WP_221067792.1;Name=WP_221067792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09275;product=hypothetical protein;protein_id=WP_221067792.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2017293 2018786 . - . ID=gene-VA249_RS09280;Name=VA249_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09280;old_locus_tag=VYA_17440 NZ_AP024165.1 GeneMarkS-2+ CDS 2017293 2018786 . - 0 ID=cds-WP_221067793.1;Parent=gene-VA249_RS09280;Dbxref=Genbank:WP_221067793.1;Name=WP_221067793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09280;product=hypothetical protein;protein_id=WP_221067793.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2019036 2019179 . - . ID=gene-VA249_RS09285;Name=VA249_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09285 NZ_AP024165.1 GeneMarkS-2+ CDS 2019036 2019179 . - 0 ID=cds-WP_155485321.1;Parent=gene-VA249_RS09285;Dbxref=Genbank:WP_155485321.1;Name=WP_155485321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09285;product=hypothetical protein;protein_id=WP_155485321.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2019860 2020879 . + . ID=gene-VA249_RS09290;Name=VA249_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09290;old_locus_tag=VYA_17450 NZ_AP024165.1 Protein Homology CDS 2019860 2020879 . + 0 ID=cds-WP_221067794.1;Parent=gene-VA249_RS09290;Dbxref=Genbank:WP_221067794.1;Name=WP_221067794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024244.2;locus_tag=VA249_RS09290;product=integrase domain-containing protein;protein_id=WP_221067794.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2020895 2021191 . + . ID=gene-VA249_RS09295;Name=VA249_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09295;old_locus_tag=VYA_17460 NZ_AP024165.1 GeneMarkS-2+ CDS 2020895 2021191 . + 0 ID=cds-WP_110416385.1;Parent=gene-VA249_RS09295;Dbxref=Genbank:WP_110416385.1;Name=WP_110416385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09295;product=hypothetical protein;protein_id=WP_110416385.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2021203 2021622 . - . ID=gene-VA249_RS09300;Name=VA249_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09300;old_locus_tag=VYA_17470 NZ_AP024165.1 Protein Homology CDS 2021203 2021622 . - 0 ID=cds-WP_221067795.1;Parent=gene-VA249_RS09300;Dbxref=Genbank:WP_221067795.1;Name=WP_221067795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378557.1;locus_tag=VA249_RS09300;product=DUF6088 family protein;protein_id=WP_221067795.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2022127 2022801 . + . ID=gene-VA249_RS09305;Name=VA249_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09305;old_locus_tag=VYA_17480 NZ_AP024165.1 Protein Homology CDS 2022127 2022801 . + 0 ID=cds-WP_221067796.1;Parent=gene-VA249_RS09305;Dbxref=Genbank:WP_221067796.1;Name=WP_221067796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733491.1;locus_tag=VA249_RS09305;product=hypothetical protein;protein_id=WP_221067796.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2022814 2023923 . + . ID=gene-VA249_RS09310;Name=VA249_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09310;old_locus_tag=VYA_17490 NZ_AP024165.1 Protein Homology CDS 2022814 2023923 . + 0 ID=cds-WP_221067797.1;Parent=gene-VA249_RS09310;Dbxref=Genbank:WP_221067797.1;Name=WP_221067797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240048.1;locus_tag=VA249_RS09310;product=XRE family transcriptional regulator;protein_id=WP_221067797.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2024179 2024682 . - . ID=gene-VA249_RS09315;Name=VA249_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09315;old_locus_tag=VYA_17500 NZ_AP024165.1 GeneMarkS-2+ CDS 2024179 2024682 . - 0 ID=cds-WP_221067798.1;Parent=gene-VA249_RS09315;Dbxref=Genbank:WP_221067798.1;Name=WP_221067798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09315;product=hypothetical protein;protein_id=WP_221067798.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2024679 2025458 . - . ID=gene-VA249_RS09320;Name=VA249_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09320;old_locus_tag=VYA_17510 NZ_AP024165.1 GeneMarkS-2+ CDS 2024679 2025458 . - 0 ID=cds-WP_221067799.1;Parent=gene-VA249_RS09320;Dbxref=Genbank:WP_221067799.1;Name=WP_221067799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS09320;product=hypothetical protein;protein_id=WP_221067799.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2026029 2026220 . - . ID=gene-VA249_RS09325;Name=VA249_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09325;old_locus_tag=VYA_17520 NZ_AP024165.1 Protein Homology CDS 2026029 2026220 . - 0 ID=cds-WP_221067800.1;Parent=gene-VA249_RS09325;Dbxref=Genbank:WP_221067800.1;Name=WP_221067800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293719.1;locus_tag=VA249_RS09325;product=AlpA family transcriptional regulator;protein_id=WP_221067800.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2026314 2027576 . - . ID=gene-VA249_RS09330;Name=VA249_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09330;old_locus_tag=VYA_17530 NZ_AP024165.1 Protein Homology CDS 2026314 2027576 . - 0 ID=cds-WP_221069914.1;Parent=gene-VA249_RS09330;Dbxref=Genbank:WP_221069914.1;Name=WP_221069914.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001886817.1;locus_tag=VA249_RS09330;product=tyrosine-type recombinase/integrase;protein_id=WP_221069914.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2027919 2028006 . - . ID=gene-VA249_RS09335;Name=VA249_RS09335;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS09335;old_locus_tag=VYA_t00540 NZ_AP024165.1 tRNAscan-SE tRNA 2027919 2028006 . - . ID=rna-VA249_RS09335;Parent=gene-VA249_RS09335;anticodon=(pos:complement(2027970..2027972));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS09335;product=tRNA-Ser NZ_AP024165.1 tRNAscan-SE exon 2027919 2028006 . - . ID=exon-VA249_RS09335-1;Parent=rna-VA249_RS09335;anticodon=(pos:complement(2027970..2027972));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS09335;product=tRNA-Ser NZ_AP024165.1 RefSeq gene 2028151 2028600 . - . ID=gene-VA249_RS09340;Name=VA249_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09340;old_locus_tag=VYA_17540 NZ_AP024165.1 Protein Homology CDS 2028151 2028600 . - 0 ID=cds-WP_221067801.1;Parent=gene-VA249_RS09340;Dbxref=Genbank:WP_221067801.1;Name=WP_221067801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646956.1;locus_tag=VA249_RS09340;product=L-alanine exporter AlaE;protein_id=WP_221067801.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2029072 2031492 . - . ID=gene-VA249_RS09345;Name=VA249_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09345;old_locus_tag=VYA_17550 NZ_AP024165.1 Protein Homology CDS 2029072 2031492 . - 0 ID=cds-WP_221067802.1;Parent=gene-VA249_RS09345;Dbxref=Genbank:WP_221067802.1;Name=WP_221067802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127459.1;locus_tag=VA249_RS09345;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_221067802.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2031546 2032157 . + . ID=gene-VA249_RS09350;Name=VA249_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09350;old_locus_tag=VYA_17560 NZ_AP024165.1 Protein Homology CDS 2031546 2032157 . + 0 ID=cds-WP_221069915.1;Parent=gene-VA249_RS09350;Dbxref=Genbank:WP_221069915.1;Name=WP_221069915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195632.1;locus_tag=VA249_RS09350;product=YecA family protein;protein_id=WP_221069915.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2032370 2033413 . - . ID=gene-VA249_RS09355;Name=VA249_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09355;old_locus_tag=VYA_17570 NZ_AP024165.1 Protein Homology CDS 2032370 2033413 . - 0 ID=cds-WP_221067803.1;Parent=gene-VA249_RS09355;Dbxref=Genbank:WP_221067803.1;Name=WP_221067803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426247.1;locus_tag=VA249_RS09355;product=ion channel;protein_id=WP_221067803.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2033626 2034687 . - . ID=gene-VA249_RS09360;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=VA249_RS09360;old_locus_tag=VYA_17580 NZ_AP024165.1 Protein Homology CDS 2033626 2034687 . - 0 ID=cds-WP_221067804.1;Parent=gene-VA249_RS09360;Dbxref=Genbank:WP_221067804.1;Name=WP_221067804.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275749.1;locus_tag=VA249_RS09360;product=quinolinate synthase NadA;protein_id=WP_221067804.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2034936 2035691 . - . ID=gene-VA249_RS09365;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=VA249_RS09365;old_locus_tag=VYA_17590 NZ_AP024165.1 Protein Homology CDS 2034936 2035691 . - 0 ID=cds-WP_221067805.1;Parent=gene-VA249_RS09365;Dbxref=Genbank:WP_221067805.1;Name=WP_221067805.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450293.1;locus_tag=VA249_RS09365;product=tol-pal system protein YbgF;protein_id=WP_221067805.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2035707 2036231 . - . ID=gene-VA249_RS09370;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=VA249_RS09370;old_locus_tag=VYA_17600 NZ_AP024165.1 Protein Homology CDS 2035707 2036231 . - 0 ID=cds-WP_211916317.1;Parent=gene-VA249_RS09370;Dbxref=Genbank:WP_211916317.1;Name=WP_211916317.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017105742.1;locus_tag=VA249_RS09370;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_211916317.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2036262 2037614 . - . ID=gene-VA249_RS09375;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=VA249_RS09375;old_locus_tag=VYA_17610 NZ_AP024165.1 Protein Homology CDS 2036262 2037614 . - 0 ID=cds-WP_128810585.1;Parent=gene-VA249_RS09375;Dbxref=Genbank:WP_128810585.1;Name=WP_128810585.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009846380.1;locus_tag=VA249_RS09375;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_128810585.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2037628 2038695 . - . ID=gene-VA249_RS09380;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=VA249_RS09380;old_locus_tag=VYA_17620 NZ_AP024165.1 Protein Homology CDS 2037628 2038695 . - 0 ID=cds-WP_211916316.1;Parent=gene-VA249_RS09380;Dbxref=Genbank:WP_211916316.1;Name=WP_211916316.1;Ontology_term=GO:0006810,GO:0005215,GO:0031237;gbkey=CDS;gene=tolA;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820045.1;locus_tag=VA249_RS09380;product=cell envelope integrity protein TolA;protein_id=WP_211916316.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2038709 2039152 . - . ID=gene-VA249_RS09385;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=VA249_RS09385;old_locus_tag=VYA_17630 NZ_AP024165.1 Protein Homology CDS 2038709 2039152 . - 0 ID=cds-WP_005441707.1;Parent=gene-VA249_RS09385;Dbxref=Genbank:WP_005441707.1;Name=WP_005441707.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0031237;gbkey=CDS;gene=tolR;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010437899.1;locus_tag=VA249_RS09385;product=protein TolR;protein_id=WP_005441707.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2039156 2039854 . - . ID=gene-VA249_RS09390;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=VA249_RS09390;old_locus_tag=VYA_17640 NZ_AP024165.1 Protein Homology CDS 2039156 2039854 . - 0 ID=cds-WP_128810583.1;Parent=gene-VA249_RS09390;Dbxref=Genbank:WP_128810583.1;Name=WP_128810583.1;Ontology_term=GO:1902600,GO:0015078,GO:0005887;gbkey=CDS;gene=tolQ;go_component=integral component of plasma membrane|0005887||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534706.1;locus_tag=VA249_RS09390;product=protein TolQ;protein_id=WP_128810583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2039844 2040263 . - . ID=gene-VA249_RS09395;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=VA249_RS09395;old_locus_tag=VYA_17650 NZ_AP024165.1 Protein Homology CDS 2039844 2040263 . - 0 ID=cds-WP_128810582.1;Parent=gene-VA249_RS09395;Dbxref=Genbank:WP_128810582.1;Name=WP_128810582.1;Ontology_term=GO:0005515,GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=protein binding|0005515||IEA,acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426200.1;locus_tag=VA249_RS09395;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_128810582.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2040436 2040738 . - . ID=gene-VA249_RS09400;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=VA249_RS09400;old_locus_tag=VYA_17660 NZ_AP024165.1 Protein Homology CDS 2040436 2040738 . - 0 ID=cds-WP_128810581.1;Parent=gene-VA249_RS09400;Dbxref=Genbank:WP_128810581.1;Name=WP_128810581.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009846375.1;locus_tag=VA249_RS09400;product=cyd operon protein YbgE;protein_id=WP_128810581.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2040731 2040838 . - . ID=gene-VA249_RS09405;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=VA249_RS09405 NZ_AP024165.1 Protein Homology CDS 2040731 2040838 . - 0 ID=cds-WP_099078639.1;Parent=gene-VA249_RS09405;Dbxref=Genbank:WP_099078639.1;Name=WP_099078639.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000270285.1;locus_tag=VA249_RS09405;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_099078639.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2040851 2041987 . - . ID=gene-VA249_RS09410;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=VA249_RS09410;old_locus_tag=VYA_17670 NZ_AP024165.1 Protein Homology CDS 2040851 2041987 . - 0 ID=cds-WP_128810580.1;Parent=gene-VA249_RS09410;Dbxref=Genbank:WP_128810580.1;Name=WP_128810580.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080041.1;locus_tag=VA249_RS09410;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_128810580.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2042005 2043591 . - . ID=gene-VA249_RS09415;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=VA249_RS09415;old_locus_tag=VYA_17680 NZ_AP024165.1 Protein Homology CDS 2042005 2043591 . - 0 ID=cds-WP_128810579.1;Parent=gene-VA249_RS09415;Dbxref=Genbank:WP_128810579.1;Name=WP_128810579.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457265.1;locus_tag=VA249_RS09415;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_128810579.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2044053 2045057 . - . ID=gene-VA249_RS09420;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=VA249_RS09420;old_locus_tag=VYA_17690 NZ_AP024165.1 Protein Homology CDS 2044053 2045057 . - 0 ID=cds-WP_211916315.1;Parent=gene-VA249_RS09420;Dbxref=Genbank:WP_211916315.1;Name=WP_211916315.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017042275.1;locus_tag=VA249_RS09420;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_211916315.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2045079 2045693 . - . ID=gene-VA249_RS09425;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=VA249_RS09425;old_locus_tag=VYA_17700 NZ_AP024165.1 Protein Homology CDS 2045079 2045693 . - 0 ID=cds-WP_211916314.1;Parent=gene-VA249_RS09425;Dbxref=Genbank:WP_211916314.1;Name=WP_211916314.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009846371.1;locus_tag=VA249_RS09425;product=Holliday junction branch migration protein RuvA;protein_id=WP_211916314.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2045843 2046364 . - . ID=gene-VA249_RS09430;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=VA249_RS09430;old_locus_tag=VYA_17710 NZ_AP024165.1 Protein Homology CDS 2045843 2046364 . - 0 ID=cds-WP_221067806.1;Parent=gene-VA249_RS09430;Dbxref=Genbank:WP_221067806.1;Name=WP_221067806.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457261.1;locus_tag=VA249_RS09430;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_221067806.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2046458 2048236 . - . ID=gene-VA249_RS09435;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=VA249_RS09435;old_locus_tag=VYA_17720 NZ_AP024165.1 Protein Homology CDS 2046458 2048236 . - 0 ID=cds-WP_211916313.1;Parent=gene-VA249_RS09435;Dbxref=Genbank:WP_211916313.1;Name=WP_211916313.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820040.1;locus_tag=VA249_RS09435;product=aspartate--tRNA ligase;protein_id=WP_211916313.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2048510 2049376 . + . ID=gene-VA249_RS09440;Name=VA249_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09440;old_locus_tag=VYA_17730 NZ_AP024165.1 Protein Homology CDS 2048510 2049376 . + 0 ID=cds-WP_221067807.1;Parent=gene-VA249_RS09440;Dbxref=Genbank:WP_221067807.1;Name=WP_221067807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819039.1;locus_tag=VA249_RS09440;product=DUF72 domain-containing protein;protein_id=WP_221067807.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2049480 2050217 . + . ID=gene-VA249_RS09445;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=VA249_RS09445;old_locus_tag=VYA_17740 NZ_AP024165.1 Protein Homology CDS 2049480 2050217 . + 0 ID=cds-WP_128810574.1;Parent=gene-VA249_RS09445;Dbxref=Genbank:WP_128810574.1;Name=WP_128810574.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275892.1;locus_tag=VA249_RS09445;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_128810574.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2050364 2051335 . + . ID=gene-VA249_RS09450;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=VA249_RS09450;old_locus_tag=VYA_17750 NZ_AP024165.1 Protein Homology CDS 2050364 2051335 . + 0 ID=cds-WP_221067808.1;Parent=gene-VA249_RS09450;Dbxref=Genbank:WP_221067808.1;Name=WP_221067808.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080032.1;locus_tag=VA249_RS09450;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_221067808.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2051556 2052302 . + . ID=gene-VA249_RS09455;Name=VA249_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09455;old_locus_tag=VYA_17760 NZ_AP024165.1 Protein Homology CDS 2051556 2052302 . + 0 ID=cds-WP_221067809.1;Parent=gene-VA249_RS09455;Dbxref=Genbank:WP_221067809.1;Name=WP_221067809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532781.1;locus_tag=VA249_RS09455;product=ATP-dependent zinc protease;protein_id=WP_221067809.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2052314 2053819 . + . ID=gene-VA249_RS09460;Name=VA249_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09460;old_locus_tag=VYA_17770 NZ_AP024165.1 Protein Homology CDS 2052314 2053819 . + 0 ID=cds-WP_211916309.1;Parent=gene-VA249_RS09460;Dbxref=Genbank:WP_211916309.1;Name=WP_211916309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127440.1;locus_tag=VA249_RS09460;product=UUP1 family membrane protein;protein_id=WP_211916309.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2053823 2054791 . + . ID=gene-VA249_RS09465;Name=VA249_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09465;old_locus_tag=VYA_17780 NZ_AP024165.1 Protein Homology CDS 2053823 2054791 . + 0 ID=cds-WP_128810571.1;Parent=gene-VA249_RS09465;Dbxref=Genbank:WP_128810571.1;Name=WP_128810571.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441682.1;locus_tag=VA249_RS09465;product=alpha-L-glutamate ligase-like protein;protein_id=WP_128810571.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2054988 2055140 . + . ID=gene-VA249_RS09470;Name=VA249_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09470;old_locus_tag=VYA_17790 NZ_AP024165.1 Protein Homology CDS 2054988 2055140 . + 0 ID=cds-WP_128810570.1;Parent=gene-VA249_RS09470;Dbxref=Genbank:WP_128810570.1;Name=WP_128810570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457235.1;locus_tag=VA249_RS09470;product=hypothetical protein;protein_id=WP_128810570.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2055277 2056293 . - . ID=gene-VA249_RS09475;Name=VA249_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09475;old_locus_tag=VYA_17800 NZ_AP024165.1 Protein Homology CDS 2055277 2056293 . - 0 ID=cds-WP_221067810.1;Parent=gene-VA249_RS09475;Dbxref=Genbank:WP_221067810.1;Name=WP_221067810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012742.2;locus_tag=VA249_RS09475;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_221067810.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2056679 2057938 . + . ID=gene-VA249_RS09480;Name=VA249_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09480;old_locus_tag=VYA_17810 NZ_AP024165.1 Protein Homology CDS 2056679 2057938 . + 0 ID=cds-WP_221067811.1;Parent=gene-VA249_RS09480;Dbxref=Genbank:WP_221067811.1;Name=WP_221067811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024808.2;locus_tag=VA249_RS09480;product=extracellular solute-binding protein;protein_id=WP_221067811.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2058031 2058909 . + . ID=gene-VA249_RS09485;Name=VA249_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09485;old_locus_tag=VYA_17820 NZ_AP024165.1 Protein Homology CDS 2058031 2058909 . + 0 ID=cds-WP_221067812.1;Parent=gene-VA249_RS09485;Dbxref=Genbank:WP_221067812.1;Name=WP_221067812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006071943.1;locus_tag=VA249_RS09485;product=sugar ABC transporter permease;protein_id=WP_221067812.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2058909 2059721 . + . ID=gene-VA249_RS09490;Name=VA249_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09490;old_locus_tag=VYA_17830 NZ_AP024165.1 Protein Homology CDS 2058909 2059721 . + 0 ID=cds-WP_221067813.1;Parent=gene-VA249_RS09490;Dbxref=Genbank:WP_221067813.1;Name=WP_221067813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006071941.1;locus_tag=VA249_RS09490;product=carbohydrate ABC transporter permease;protein_id=WP_221067813.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2059721 2062018 . + . ID=gene-VA249_RS09495;Name=VA249_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09495;old_locus_tag=VYA_17840 NZ_AP024165.1 Protein Homology CDS 2059721 2062018 . + 0 ID=cds-WP_221067814.1;Parent=gene-VA249_RS09495;Dbxref=Genbank:WP_221067814.1;Name=WP_221067814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014850.2;locus_tag=VA249_RS09495;product=hypothetical protein;protein_id=WP_221067814.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2062011 2063093 . + . ID=gene-VA249_RS09500;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=VA249_RS09500;old_locus_tag=VYA_17850 NZ_AP024165.1 Protein Homology CDS 2062011 2063093 . + 0 ID=cds-WP_221067815.1;Parent=gene-VA249_RS09500;Dbxref=Genbank:WP_221067815.1;Name=WP_221067815.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008081345.1;locus_tag=VA249_RS09500;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_221067815.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2063559 2065097 . + . ID=gene-VA249_RS09505;Name=VA249_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09505;old_locus_tag=VYA_17860 NZ_AP024165.1 Protein Homology CDS 2063559 2065097 . + 0 ID=cds-WP_221067816.1;Parent=gene-VA249_RS09505;Dbxref=Genbank:WP_221067816.1;Name=WP_221067816.1;Ontology_term=GO:0015926;gbkey=CDS;go_function=glucosidase activity|0015926||IEA;inference=COORDINATES: protein motif:HMM:NF019365.2;locus_tag=VA249_RS09505;product=glycosyl hydrolase 53 family protein;protein_id=WP_221067816.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 2065259 2065620 . - . ID=gene-VA249_RS09510;Name=VA249_RS09510;end_range=2065620,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS09510;partial=true;pseudo=true;start_range=.,2065259 NZ_AP024165.1 Protein Homology CDS 2065259 2065620 . - 0 ID=cds-VA249_RS09510;Parent=gene-VA249_RS09510;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2065620,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611745.1;locus_tag=VA249_RS09510;partial=true;product=transposase;pseudo=true;start_range=.,2065259;transl_table=11 NZ_AP024165.1 RefSeq gene 2065669 2070132 . - . ID=gene-VA249_RS09515;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=VA249_RS09515;old_locus_tag=VYA_17880 NZ_AP024165.1 Protein Homology CDS 2065669 2070132 . - 0 ID=cds-WP_221069917.1;Parent=gene-VA249_RS09515;Dbxref=Genbank:WP_221069917.1;Name=WP_221069917.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150798.1;locus_tag=VA249_RS09515;product=chromosome partition protein MukB;protein_id=WP_221069917.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2070135 2070872 . - . ID=gene-VA249_RS09520;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=VA249_RS09520;old_locus_tag=VYA_17890 NZ_AP024165.1 Protein Homology CDS 2070135 2070872 . - 0 ID=cds-WP_221067817.1;Parent=gene-VA249_RS09520;Dbxref=Genbank:WP_221067817.1;Name=WP_221067817.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008080400.1;locus_tag=VA249_RS09520;product=chromosome partition protein MukE;protein_id=WP_221067817.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2070853 2072190 . - . ID=gene-VA249_RS09525;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=VA249_RS09525;old_locus_tag=VYA_17900 NZ_AP024165.1 Protein Homology CDS 2070853 2072190 . - 0 ID=cds-WP_128810568.1;Parent=gene-VA249_RS09525;Dbxref=Genbank:WP_128810568.1;Name=WP_128810568.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634722.1;locus_tag=VA249_RS09525;product=chromosome partition protein MukF;protein_id=WP_128810568.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2072193 2072984 . - . ID=gene-VA249_RS09530;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=VA249_RS09530;old_locus_tag=VYA_17910 NZ_AP024165.1 Protein Homology CDS 2072193 2072984 . - 0 ID=cds-WP_211916548.1;Parent=gene-VA249_RS09530;Dbxref=Genbank:WP_211916548.1;Name=WP_211916548.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532800.1;locus_tag=VA249_RS09530;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_211916548.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2073100 2073891 . + . ID=gene-VA249_RS09535;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=VA249_RS09535;old_locus_tag=VYA_17920 NZ_AP024165.1 Protein Homology CDS 2073100 2073891 . + 0 ID=cds-WP_211916307.1;Parent=gene-VA249_RS09535;Dbxref=Genbank:WP_211916307.1;Name=WP_211916307.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450349.1;locus_tag=VA249_RS09535;product=envelope biogenesis factor ElyC;protein_id=WP_211916307.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2074056 2074769 . - . ID=gene-VA249_RS09540;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=VA249_RS09540;old_locus_tag=VYA_17930 NZ_AP024165.1 Protein Homology CDS 2074056 2074769 . - 0 ID=cds-WP_221067818.1;Parent=gene-VA249_RS09540;Dbxref=Genbank:WP_221067818.1;Name=WP_221067818.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004744334.1;locus_tag=VA249_RS09540;product=two-component system response regulator TorR;protein_id=WP_221067818.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2075036 2075683 . + . ID=gene-VA249_RS09545;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=VA249_RS09545;old_locus_tag=VYA_17940 NZ_AP024165.1 Protein Homology CDS 2075036 2075683 . + 0 ID=cds-WP_128810565.1;Parent=gene-VA249_RS09545;Dbxref=Genbank:WP_128810565.1;Name=WP_128810565.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012603615.1;locus_tag=VA249_RS09545;product=molecular chaperone TorD;protein_id=WP_128810565.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2076126 2077130 . + . ID=gene-VA249_RS09550;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=VA249_RS09550;old_locus_tag=VYA_17950 NZ_AP024165.1 Protein Homology CDS 2076126 2077130 . + 0 ID=cds-WP_221067819.1;Parent=gene-VA249_RS09550;Dbxref=Genbank:WP_221067819.1;Name=WP_221067819.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080017.1;locus_tag=VA249_RS09550;product=HTH-type transcriptional repressor PurR;protein_id=WP_221067819.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 2077510 2077711 . + . ID=id-NZ_AP024165.1:2077510..2077711;Dbxref=RFAM:RF01051;Note=cyclic di-GMP riboswitch class I;bound_moiety=cyclic di-GMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 2077828 2078418 . + . ID=gene-VA249_RS09555;Name=VA249_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09555;old_locus_tag=VYA_17960 NZ_AP024165.1 Protein Homology CDS 2077828 2078418 . + 0 ID=cds-WP_211916305.1;Parent=gene-VA249_RS09555;Dbxref=Genbank:WP_211916305.1;Name=WP_211916305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450356.1;locus_tag=VA249_RS09555;product=TfoX/Sxy family protein;protein_id=WP_211916305.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2078531 2079220 . + . ID=gene-VA249_RS09560;Name=VA249_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09560;old_locus_tag=VYA_17970 NZ_AP024165.1 Protein Homology CDS 2078531 2079220 . + 0 ID=cds-WP_211916304.1;Parent=gene-VA249_RS09560;Dbxref=Genbank:WP_211916304.1;Name=WP_211916304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450359.1;locus_tag=VA249_RS09560;product=TVP38/TMEM64 family protein;protein_id=WP_211916304.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2079220 2079537 . + . ID=gene-VA249_RS09565;Name=VA249_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09565;old_locus_tag=VYA_17980 NZ_AP024165.1 Protein Homology CDS 2079220 2079537 . + 0 ID=cds-WP_128810562.1;Parent=gene-VA249_RS09565;Dbxref=Genbank:WP_128810562.1;Name=WP_128810562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195004.1;locus_tag=VA249_RS09565;product=DUF2007 domain-containing protein;protein_id=WP_128810562.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2079596 2080399 . - . ID=gene-VA249_RS09570;Name=VA249_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09570;old_locus_tag=VYA_17990 NZ_AP024165.1 Protein Homology CDS 2079596 2080399 . - 0 ID=cds-WP_221067820.1;Parent=gene-VA249_RS09570;Dbxref=Genbank:WP_221067820.1;Name=WP_221067820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127431.1;locus_tag=VA249_RS09570;product=alpha/beta hydrolase;protein_id=WP_221067820.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2080520 2081977 . - . ID=gene-VA249_RS09575;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=VA249_RS09575;old_locus_tag=VYA_18000 NZ_AP024165.1 Protein Homology CDS 2080520 2081977 . - 0 ID=cds-WP_221067821.1;Parent=gene-VA249_RS09575;Dbxref=Genbank:WP_221067821.1;Name=WP_221067821.1;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195005.1;locus_tag=VA249_RS09575;product=glycogen synthase GlgA;protein_id=WP_221067821.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2081967 2083184 . - . ID=gene-VA249_RS09580;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=VA249_RS09580;old_locus_tag=VYA_18010 NZ_AP024165.1 Protein Homology CDS 2081967 2083184 . - 0 ID=cds-WP_128810559.1;Parent=gene-VA249_RS09580;Dbxref=Genbank:WP_128810559.1;Name=WP_128810559.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008220093.1;locus_tag=VA249_RS09580;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_128810559.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2083703 2086333 . - . ID=gene-VA249_RS09585;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=VA249_RS09585;old_locus_tag=VYA_18030 NZ_AP024165.1 Protein Homology CDS 2083703 2086333 . - 0 ID=cds-WP_221067822.1;Parent=gene-VA249_RS09585;Dbxref=Genbank:WP_221067822.1;Name=WP_221067822.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842753.1;locus_tag=VA249_RS09585;product=type I DNA topoisomerase;protein_id=WP_221067822.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2086769 2087017 . + . ID=gene-VA249_RS09590;Name=VA249_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09590;old_locus_tag=VYA_18040 NZ_AP024165.1 Protein Homology CDS 2086769 2087017 . + 0 ID=cds-WP_128810557.1;Parent=gene-VA249_RS09590;Dbxref=Genbank:WP_128810557.1;Name=WP_128810557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450369.1;locus_tag=VA249_RS09590;product=YciN family protein;protein_id=WP_128810557.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2087084 2088364 . - . ID=gene-VA249_RS09595;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=VA249_RS09595;old_locus_tag=VYA_18050 NZ_AP024165.1 Protein Homology CDS 2087084 2088364 . - 0 ID=cds-WP_221067823.1;Parent=gene-VA249_RS09595;Dbxref=Genbank:WP_221067823.1;Name=WP_221067823.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457254.1;locus_tag=VA249_RS09595;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_221067823.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2088540 2089016 . - . ID=gene-VA249_RS09600;Name=VA249_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09600;old_locus_tag=VYA_18060 NZ_AP024165.1 Protein Homology CDS 2088540 2089016 . - 0 ID=cds-WP_221067824.1;Parent=gene-VA249_RS09600;Dbxref=Genbank:WP_221067824.1;Name=WP_221067824.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450372.1;locus_tag=VA249_RS09600;product=glycine zipper 2TM domain-containing protein;protein_id=WP_221067824.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2089057 2089767 . + . ID=gene-VA249_RS09605;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=VA249_RS09605;old_locus_tag=VYA_18070 NZ_AP024165.1 Protein Homology CDS 2089057 2089767 . + 0 ID=cds-WP_221067825.1;Parent=gene-VA249_RS09605;Dbxref=Genbank:WP_221067825.1;Name=WP_221067825.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447212.1;locus_tag=VA249_RS09605;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_221067825.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2089764 2090465 . + . ID=gene-VA249_RS09610;Name=VA249_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09610;old_locus_tag=VYA_18080 NZ_AP024165.1 Protein Homology CDS 2089764 2090465 . + 0 ID=cds-WP_221067826.1;Parent=gene-VA249_RS09610;Dbxref=Genbank:WP_221067826.1;Name=WP_221067826.1;Ontology_term=GO:0016598,GO:0004057;gbkey=CDS;go_function=arginyltransferase activity|0004057||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195011.1;locus_tag=VA249_RS09610;product=arginyltransferase;protein_id=WP_221067826.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2090546 2090764 . + . ID=gene-VA249_RS09615;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=VA249_RS09615;old_locus_tag=VYA_18090 NZ_AP024165.1 Protein Homology CDS 2090546 2090764 . + 0 ID=cds-WP_001040192.1;Parent=gene-VA249_RS09615;Dbxref=Genbank:WP_001040192.1;Name=WP_001040192.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=VA249_RS09615;product=translation initiation factor IF-1;protein_id=WP_001040192.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2090927 2093197 . - . ID=gene-VA249_RS09620;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=VA249_RS09620;old_locus_tag=VYA_18100 NZ_AP024165.1 Protein Homology CDS 2090927 2093197 . - 0 ID=cds-WP_221067827.1;Parent=gene-VA249_RS09620;Dbxref=Genbank:WP_221067827.1;Name=WP_221067827.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127424.1;locus_tag=VA249_RS09620;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_221067827.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2093245 2093565 . - . ID=gene-VA249_RS09625;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=VA249_RS09625;old_locus_tag=VYA_18110 NZ_AP024165.1 Protein Homology CDS 2093245 2093565 . - 0 ID=cds-WP_128810552.1;Parent=gene-VA249_RS09625;Dbxref=Genbank:WP_128810552.1;Name=WP_128810552.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041728.1;locus_tag=VA249_RS09625;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_128810552.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2094326 2094544 . + . ID=gene-VA249_RS09630;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=VA249_RS09630;old_locus_tag=VYA_18120 NZ_AP024165.1 Protein Homology CDS 2094326 2094544 . + 0 ID=cds-WP_164837158.1;Parent=gene-VA249_RS09630;Dbxref=Genbank:WP_164837158.1;Name=WP_164837158.1;Ontology_term=GO:0008156,GO:0009409;gbkey=CDS;gene=cspD;go_process=negative regulation of DNA replication|0008156||IEA,response to cold|0009409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378407.1;locus_tag=VA249_RS09630;product=cold shock domain-containing protein CspD;protein_id=WP_164837158.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2094775 2096997 . - . ID=gene-VA249_RS09635;Name=VA249_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09635;old_locus_tag=VYA_18130 NZ_AP024165.1 Protein Homology CDS 2094775 2096997 . - 0 ID=cds-WP_221067828.1;Parent=gene-VA249_RS09635;Dbxref=Genbank:WP_221067828.1;Name=WP_221067828.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013571398.1;locus_tag=VA249_RS09635;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_221067828.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2097367 2098071 . + . ID=gene-VA249_RS09640;Name=VA249_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09640;old_locus_tag=VYA_18140 NZ_AP024165.1 Protein Homology CDS 2097367 2098071 . + 0 ID=cds-WP_221067829.1;Parent=gene-VA249_RS09640;Dbxref=Genbank:WP_221067829.1;Name=WP_221067829.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698298.1;locus_tag=VA249_RS09640;product=pseudouridine synthase;protein_id=WP_221067829.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2098193 2098846 . - . ID=gene-VA249_RS09645;Name=VA249_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09645;old_locus_tag=VYA_18150 NZ_AP024165.1 Protein Homology CDS 2098193 2098846 . - 0 ID=cds-WP_221067830.1;Parent=gene-VA249_RS09645;Dbxref=Genbank:WP_221067830.1;Name=WP_221067830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005390694.1;locus_tag=VA249_RS09645;product=DUF2057 family protein;protein_id=WP_221067830.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2099078 2100085 . - . ID=gene-VA249_RS09650;Name=VA249_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09650;old_locus_tag=VYA_18160 NZ_AP024165.1 Protein Homology CDS 2099078 2100085 . - 0 ID=cds-WP_221067831.1;Parent=gene-VA249_RS09650;Dbxref=Genbank:WP_221067831.1;Name=WP_221067831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005481867.1;locus_tag=VA249_RS09650;product=porin;protein_id=WP_221067831.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2100601 2102676 . + . ID=gene-VA249_RS09655;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=VA249_RS09655;old_locus_tag=VYA_18170 NZ_AP024165.1 Protein Homology CDS 2100601 2102676 . + 0 ID=cds-WP_221067832.1;Parent=gene-VA249_RS09655;Dbxref=Genbank:WP_221067832.1;Name=WP_221067832.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017422001.1;locus_tag=VA249_RS09655;product=ATP-dependent DNA helicase DinG;protein_id=WP_221067832.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2102723 2103508 . + . ID=gene-VA249_RS09660;Name=VA249_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09660;old_locus_tag=VYA_18180 NZ_AP024165.1 Protein Homology CDS 2102723 2103508 . + 0 ID=cds-WP_221067833.1;Parent=gene-VA249_RS09660;Dbxref=Genbank:WP_221067833.1;Name=WP_221067833.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534026.1;locus_tag=VA249_RS09660;product=TSUP family transporter;protein_id=WP_221067833.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2103505 2104050 . + . ID=gene-VA249_RS09665;Name=VA249_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09665;old_locus_tag=VYA_18190 NZ_AP024165.1 Protein Homology CDS 2103505 2104050 . + 0 ID=cds-WP_221067834.1;Parent=gene-VA249_RS09665;Dbxref=Genbank:WP_221067834.1;Name=WP_221067834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195017.1;locus_tag=VA249_RS09665;product=primosomal replication protein;protein_id=WP_221067834.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2104050 2104226 . + . ID=gene-VA249_RS09670;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=VA249_RS09670;old_locus_tag=VYA_18200 NZ_AP024165.1 Protein Homology CDS 2104050 2104226 . + 0 ID=cds-WP_221067835.1;Parent=gene-VA249_RS09670;Dbxref=Genbank:WP_221067835.1;Name=WP_221067835.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332863.1;locus_tag=VA249_RS09670;product=pleiotropic regulatory protein RsmS;protein_id=WP_221067835.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2104223 2105029 . + . ID=gene-VA249_RS09675;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=VA249_RS09675;old_locus_tag=VYA_18210 NZ_AP024165.1 Protein Homology CDS 2104223 2105029 . + 0 ID=cds-WP_128810543.1;Parent=gene-VA249_RS09675;Dbxref=Genbank:WP_128810543.1;Name=WP_128810543.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017630434.1;locus_tag=VA249_RS09675;product=exodeoxyribonuclease III;protein_id=WP_128810543.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2105105 2105782 . - . ID=gene-VA249_RS09680;Name=VA249_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09680;old_locus_tag=VYA_18220 NZ_AP024165.1 Protein Homology CDS 2105105 2105782 . - 0 ID=cds-WP_211916547.1;Parent=gene-VA249_RS09680;Dbxref=Genbank:WP_211916547.1;Name=WP_211916547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017107254.1;locus_tag=VA249_RS09680;product=ABC transporter permease;protein_id=WP_211916547.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2105786 2106526 . - . ID=gene-VA249_RS09685;Name=VA249_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09685;old_locus_tag=VYA_18230 NZ_AP024165.1 Protein Homology CDS 2105786 2106526 . - 0 ID=cds-WP_128810542.1;Parent=gene-VA249_RS09685;Dbxref=Genbank:WP_128810542.1;Name=WP_128810542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000886244.1;locus_tag=VA249_RS09685;product=ABC transporter permease;protein_id=WP_128810542.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2106620 2107390 . - . ID=gene-VA249_RS09690;Name=VA249_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09690;old_locus_tag=VYA_18240 NZ_AP024165.1 Protein Homology CDS 2106620 2107390 . - 0 ID=cds-WP_221067836.1;Parent=gene-VA249_RS09690;Dbxref=Genbank:WP_221067836.1;Name=WP_221067836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017055013.1;locus_tag=VA249_RS09690;product=ABC transporter substrate-binding protein;protein_id=WP_221067836.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2107494 2108264 . - . ID=gene-VA249_RS09695;Name=VA249_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09695;old_locus_tag=VYA_18250 NZ_AP024165.1 Protein Homology CDS 2107494 2108264 . - 0 ID=cds-WP_128810540.1;Parent=gene-VA249_RS09695;Dbxref=Genbank:WP_128810540.1;Name=WP_128810540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017030877.1;locus_tag=VA249_RS09695;product=ABC transporter ATP-binding protein;protein_id=WP_128810540.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2108492 2109955 . - . ID=gene-VA249_RS09700;Name=VA249_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09700;old_locus_tag=VYA_18260 NZ_AP024165.1 Protein Homology CDS 2108492 2109955 . - 0 ID=cds-WP_221067837.1;Parent=gene-VA249_RS09700;Dbxref=Genbank:WP_221067837.1;Name=WP_221067837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195023.1;locus_tag=VA249_RS09700;product=flagellar sheath protein A;protein_id=WP_221067837.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2110417 2111964 . + . ID=gene-VA249_RS09705;Name=VA249_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09705;old_locus_tag=VYA_18270 NZ_AP024165.1 Protein Homology CDS 2110417 2111964 . + 0 ID=cds-WP_128810538.1;Parent=gene-VA249_RS09705;Dbxref=Genbank:WP_128810538.1;Name=WP_128810538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009846317.1;locus_tag=VA249_RS09705;product=DUF3360 family protein;protein_id=WP_128810538.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2112270 2114546 . + . ID=gene-VA249_RS09710;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=VA249_RS09710;old_locus_tag=VYA_18280 NZ_AP024165.1 Protein Homology CDS 2112270 2114546 . + 0 ID=cds-WP_221067838.1;Parent=gene-VA249_RS09710;Dbxref=Genbank:WP_221067838.1;Name=WP_221067838.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009846316.1;locus_tag=VA249_RS09710;product=formate C-acetyltransferase;protein_id=WP_221067838.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2114699 2115679 . + . ID=gene-VA249_RS09715;Name=VA249_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09715;old_locus_tag=VYA_18290 NZ_AP024165.1 Protein Homology CDS 2114699 2115679 . + 0 ID=cds-WP_221067839.1;Parent=gene-VA249_RS09715;Dbxref=Genbank:WP_221067839.1;Name=WP_221067839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842777.1;locus_tag=VA249_RS09715;product=DUF2219 family protein;protein_id=WP_221067839.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2115824 2116564 . + . ID=gene-VA249_RS09720;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=VA249_RS09720;old_locus_tag=VYA_18300 NZ_AP024165.1 Protein Homology CDS 2115824 2116564 . + 0 ID=cds-WP_128810535.1;Parent=gene-VA249_RS09720;Dbxref=Genbank:WP_128810535.1;Name=WP_128810535.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005456250.1;locus_tag=VA249_RS09720;product=pyruvate formate lyase 1-activating protein;protein_id=WP_128810535.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2116655 2117317 . + . ID=gene-VA249_RS09725;Name=VA249_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09725;old_locus_tag=VYA_18310 NZ_AP024165.1 Protein Homology CDS 2116655 2117317 . + 0 ID=cds-WP_128810534.1;Parent=gene-VA249_RS09725;Dbxref=Genbank:WP_128810534.1;Name=WP_128810534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534012.1;locus_tag=VA249_RS09725;product=hypothetical protein;protein_id=WP_128810534.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2117520 2118020 . + . ID=gene-VA249_RS09730;Name=VA249_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09730;old_locus_tag=VYA_18320 NZ_AP024165.1 Protein Homology CDS 2117520 2118020 . + 0 ID=cds-WP_128810533.1;Parent=gene-VA249_RS09730;Dbxref=Genbank:WP_128810533.1;Name=WP_128810533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010437350.1;locus_tag=VA249_RS09730;product=YfbU family protein;protein_id=WP_128810533.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2118552 2120486 . + . ID=gene-VA249_RS09735;Name=VA249_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09735;old_locus_tag=VYA_18330 NZ_AP024165.1 Protein Homology CDS 2118552 2120486 . + 0 ID=cds-WP_128810532.1;Parent=gene-VA249_RS09735;Dbxref=Genbank:WP_128810532.1;Name=WP_128810532.1;Ontology_term=GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079978.1;locus_tag=VA249_RS09735;product=PrkA family serine protein kinase;protein_id=WP_128810532.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 2120532 2121802 . + . ID=gene-VA249_RS09740;Name=VA249_RS09740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS09740;pseudo=true NZ_AP024165.1 Protein Homology CDS 2120532 2121802 . + 0 ID=cds-VA249_RS09740;Parent=gene-VA249_RS09740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019820886.1;locus_tag=VA249_RS09740;product=YeaH/YhbH family protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 2121814 2123370 . + . ID=gene-VA249_RS09745;Name=VA249_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09745;old_locus_tag=VYA_18360 NZ_AP024165.1 Protein Homology CDS 2121814 2123370 . + 0 ID=cds-WP_221067840.1;Parent=gene-VA249_RS09745;Dbxref=Genbank:WP_221067840.1;Name=WP_221067840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195026.1;locus_tag=VA249_RS09745;product=SpoVR family protein;protein_id=WP_221067840.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2123615 2124373 . - . ID=gene-VA249_RS09750;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=VA249_RS09750;old_locus_tag=VYA_18370 NZ_AP024165.1 Protein Homology CDS 2123615 2124373 . - 0 ID=cds-WP_221067841.1;Parent=gene-VA249_RS09750;Dbxref=Genbank:WP_221067841.1;Name=WP_221067841.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011334.1;locus_tag=VA249_RS09750;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_221067841.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2124373 2124552 . - . ID=gene-VA249_RS09755;Name=VA249_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09755;old_locus_tag=VYA_18380 NZ_AP024165.1 Protein Homology CDS 2124373 2124552 . - 0 ID=cds-WP_128810529.1;Parent=gene-VA249_RS09755;Dbxref=Genbank:WP_128810529.1;Name=WP_128810529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079973.1;locus_tag=VA249_RS09755;product=Trm112 family protein;protein_id=WP_128810529.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2124533 2125540 . - . ID=gene-VA249_RS09760;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=VA249_RS09760;old_locus_tag=VYA_18390 NZ_AP024165.1 Protein Homology CDS 2124533 2125540 . - 0 ID=cds-WP_221067842.1;Parent=gene-VA249_RS09760;Dbxref=Genbank:WP_221067842.1;Name=WP_221067842.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195028.1;locus_tag=VA249_RS09760;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_221067842.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2125546 2127294 . - . ID=gene-VA249_RS09765;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=VA249_RS09765;old_locus_tag=VYA_18400 NZ_AP024165.1 Protein Homology CDS 2125546 2127294 . - 0 ID=cds-WP_128810527.1;Parent=gene-VA249_RS09765;Dbxref=Genbank:WP_128810527.1;Name=WP_128810527.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016021;gbkey=CDS;gene=msbA;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195029.1;locus_tag=VA249_RS09765;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_128810527.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2127326 2129602 . - . ID=gene-VA249_RS09770;Name=VA249_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09770 NZ_AP024165.1 Protein Homology CDS 2127326 2129602 . - 0 ID=cds-WP_221067843.1;Parent=gene-VA249_RS09770;Dbxref=Genbank:WP_221067843.1;Name=WP_221067843.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188334.1;locus_tag=VA249_RS09770;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_221067843.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2129611 2130120 . + . ID=gene-VA249_RS09775;Name=VA249_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09775;old_locus_tag=VYA_18420 NZ_AP024165.1 Protein Homology CDS 2129611 2130120 . + 0 ID=cds-WP_128810525.1;Parent=gene-VA249_RS09775;Dbxref=Genbank:WP_128810525.1;Name=WP_128810525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531989.1;locus_tag=VA249_RS09775;product=DUF2062 domain-containing protein;protein_id=WP_128810525.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2130323 2131567 . - . ID=gene-VA249_RS09780;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=VA249_RS09780;old_locus_tag=VYA_18430 NZ_AP024165.1 Protein Homology CDS 2130323 2131567 . - 0 ID=cds-WP_221067844.1;Parent=gene-VA249_RS09780;Dbxref=Genbank:WP_221067844.1;Name=WP_221067844.1;gbkey=CDS;gene=lolE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002044270.1;locus_tag=VA249_RS09780;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_221067844.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2131570 2132277 . - . ID=gene-VA249_RS09785;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=VA249_RS09785;old_locus_tag=VYA_18440 NZ_AP024165.1 Protein Homology CDS 2131570 2132277 . - 0 ID=cds-WP_221067845.1;Parent=gene-VA249_RS09785;Dbxref=Genbank:WP_221067845.1;Name=WP_221067845.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431685.1;locus_tag=VA249_RS09785;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_221067845.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2132270 2133478 . - . ID=gene-VA249_RS09790;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=VA249_RS09790;old_locus_tag=VYA_18450 NZ_AP024165.1 Protein Homology CDS 2132270 2133478 . - 0 ID=cds-WP_221067846.1;Parent=gene-VA249_RS09790;Dbxref=Genbank:WP_221067846.1;Name=WP_221067846.1;Ontology_term=GO:0042953,GO:0016021;gbkey=CDS;gene=lolC;go_component=integral component of membrane|0016021||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439899.1;locus_tag=VA249_RS09790;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_221067846.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2133742 2134311 . + . ID=gene-VA249_RS09795;Name=VA249_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09795;old_locus_tag=VYA_18460 NZ_AP024165.1 Protein Homology CDS 2133742 2134311 . + 0 ID=cds-WP_221067847.1;Parent=gene-VA249_RS09795;Dbxref=Genbank:WP_221067847.1;Name=WP_221067847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842792.1;locus_tag=VA249_RS09795;product=PilZ domain-containing protein;protein_id=WP_221067847.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2134337 2137798 . + . ID=gene-VA249_RS09800;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=VA249_RS09800;old_locus_tag=VYA_18470 NZ_AP024165.1 Protein Homology CDS 2134337 2137798 . + 0 ID=cds-WP_221067849.1;Parent=gene-VA249_RS09800;Dbxref=Genbank:WP_221067849.1;Name=WP_221067849.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439896.1;locus_tag=VA249_RS09800;product=transcription-repair coupling factor;protein_id=WP_221067849.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2137806 2138576 . + . ID=gene-VA249_RS09805;Name=VA249_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09805;old_locus_tag=VYA_18480 NZ_AP024165.1 Protein Homology CDS 2137806 2138576 . + 0 ID=cds-WP_221067850.1;Parent=gene-VA249_RS09805;Dbxref=Genbank:WP_221067850.1;Name=WP_221067850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532003.1;locus_tag=VA249_RS09805;product=CsiV family protein;protein_id=WP_221067850.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2138691 2139239 . + . ID=gene-VA249_RS09810;Name=VA249_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09810;old_locus_tag=VYA_18490 NZ_AP024165.1 Protein Homology CDS 2138691 2139239 . + 0 ID=cds-WP_221067852.1;Parent=gene-VA249_RS09810;Dbxref=Genbank:WP_221067852.1;Name=WP_221067852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532005.1;locus_tag=VA249_RS09810;product=GNAT family N-acetyltransferase;protein_id=WP_221067852.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2139344 2140633 . - . ID=gene-VA249_RS09815;Name=VA249_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09815;old_locus_tag=VYA_18500 NZ_AP024165.1 Protein Homology CDS 2139344 2140633 . - 0 ID=cds-WP_128810517.1;Parent=gene-VA249_RS09815;Dbxref=Genbank:WP_128810517.1;Name=WP_128810517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196854.1;locus_tag=VA249_RS09815;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_128810517.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2141212 2141751 . - . ID=gene-VA249_RS09820;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=VA249_RS09820;old_locus_tag=VYA_18510 NZ_AP024165.1 Protein Homology CDS 2141212 2141751 . - 0 ID=cds-WP_221067853.1;Parent=gene-VA249_RS09820;Dbxref=Genbank:WP_221067853.1;Name=WP_221067853.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000587950.1;locus_tag=VA249_RS09820;product=alpha/beta hydrolase YcfP;protein_id=WP_221067853.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2141830 2142711 . - . ID=gene-VA249_RS09825;Name=VA249_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09825;old_locus_tag=VYA_18520 NZ_AP024165.1 Protein Homology CDS 2141830 2142711 . - 0 ID=cds-WP_221067854.1;Parent=gene-VA249_RS09825;Dbxref=Genbank:WP_221067854.1;Name=WP_221067854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446675.1;locus_tag=VA249_RS09825;product=phosphotransferase;protein_id=WP_221067854.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2142754 2143344 . - . ID=gene-VA249_RS09830;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=VA249_RS09830;old_locus_tag=VYA_18530 NZ_AP024165.1 Protein Homology CDS 2142754 2143344 . - 0 ID=cds-WP_128810514.1;Parent=gene-VA249_RS09830;Dbxref=Genbank:WP_128810514.1;Name=WP_128810514.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017060223.1;locus_tag=VA249_RS09830;product=penicillin-binding protein activator LpoB;protein_id=WP_128810514.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2143435 2143827 . - . ID=gene-VA249_RS09835;Name=VA249_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09835;old_locus_tag=VYA_18540 NZ_AP024165.1 Protein Homology CDS 2143435 2143827 . - 0 ID=cds-WP_221067855.1;Parent=gene-VA249_RS09835;Dbxref=Genbank:WP_221067855.1;Name=WP_221067855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431649.1;locus_tag=VA249_RS09835;product=DUF1425 domain-containing protein;protein_id=WP_221067855.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2143827 2145221 . - . ID=gene-VA249_RS09840;Name=VA249_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09840;old_locus_tag=VYA_18550 NZ_AP024165.1 Protein Homology CDS 2143827 2145221 . - 0 ID=cds-WP_221067856.1;Parent=gene-VA249_RS09840;Dbxref=Genbank:WP_221067856.1;Name=WP_221067856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332841.1;locus_tag=VA249_RS09840;product=hypothetical protein;protein_id=WP_221067856.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2145371 2145721 . - . ID=gene-VA249_RS09845;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=VA249_RS09845;old_locus_tag=VYA_18560 NZ_AP024165.1 Protein Homology CDS 2145371 2145721 . - 0 ID=cds-WP_128810511.1;Parent=gene-VA249_RS09845;Dbxref=Genbank:WP_128810511.1;Name=WP_128810511.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431651.1;locus_tag=VA249_RS09845;product=purine nucleoside phosphoramidase;protein_id=WP_128810511.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2145957 2147948 . + . ID=gene-VA249_RS09850;Name=VA249_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09850;old_locus_tag=VYA_18570 NZ_AP024165.1 Protein Homology CDS 2145957 2147948 . + 0 ID=cds-WP_221067858.1;Parent=gene-VA249_RS09850;Dbxref=Genbank:WP_221067858.1;Name=WP_221067858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378474.1;locus_tag=VA249_RS09850;product=methyl-accepting chemotaxis protein;protein_id=WP_221067858.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2148113 2149273 . + . ID=gene-VA249_RS09855;Name=VA249_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09855;old_locus_tag=VYA_18580 NZ_AP024165.1 Protein Homology CDS 2148113 2149273 . + 0 ID=cds-WP_221067859.1;Parent=gene-VA249_RS09855;Dbxref=Genbank:WP_221067859.1;Name=WP_221067859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820008.1;locus_tag=VA249_RS09855;product=DUF1887 family protein;protein_id=WP_221067859.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2149447 2150205 . - . ID=gene-VA249_RS09860;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=VA249_RS09860;old_locus_tag=VYA_18590 NZ_AP024165.1 Protein Homology CDS 2149447 2150205 . - 0 ID=cds-WP_005437517.1;Parent=gene-VA249_RS09860;Dbxref=Genbank:WP_005437517.1;Name=WP_005437517.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847163.1;locus_tag=VA249_RS09860;product=uridine phosphorylase;protein_id=WP_005437517.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2150513 2152819 . - . ID=gene-VA249_RS09865;Name=VA249_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09865;old_locus_tag=VYA_18610 NZ_AP024165.1 Protein Homology CDS 2150513 2152819 . - 0 ID=cds-WP_221067865.1;Parent=gene-VA249_RS09865;Dbxref=Genbank:WP_221067865.1;Name=WP_221067865.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;go_function=ATPase-coupled cation transmembrane transporter activity|0019829||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195040.1;locus_tag=VA249_RS09865;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=WP_221067865.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2152920 2154371 . - . ID=gene-VA249_RS09870;Name=VA249_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09870;old_locus_tag=VYA_18620 NZ_AP024165.1 Protein Homology CDS 2152920 2154371 . - 0 ID=cds-WP_221067867.1;Parent=gene-VA249_RS09870;Dbxref=Genbank:WP_221067867.1;Name=WP_221067867.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447103.1;locus_tag=VA249_RS09870;product=MATE family efflux transporter;protein_id=WP_221067867.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2154435 2154854 . - . ID=gene-VA249_RS09875;Name=VA249_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09875;old_locus_tag=VYA_18630 NZ_AP024165.1 Protein Homology CDS 2154435 2154854 . - 0 ID=cds-WP_128810506.1;Parent=gene-VA249_RS09875;Dbxref=Genbank:WP_128810506.1;Name=WP_128810506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017057011.1;locus_tag=VA249_RS09875;product=CBS domain-containing protein;protein_id=WP_128810506.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2155199 2156818 . - . ID=gene-VA249_RS09880;Name=VA249_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09880;old_locus_tag=VYA_18640 NZ_AP024165.1 Protein Homology CDS 2155199 2156818 . - 0 ID=cds-WP_221067869.1;Parent=gene-VA249_RS09880;Dbxref=Genbank:WP_221067869.1;Name=WP_221067869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461132.1;locus_tag=VA249_RS09880;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_221067869.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2157047 2157370 . + . ID=gene-VA249_RS09885;Name=VA249_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09885;old_locus_tag=VYA_18650 NZ_AP024165.1 Protein Homology CDS 2157047 2157370 . + 0 ID=cds-WP_128810504.1;Parent=gene-VA249_RS09885;Dbxref=Genbank:WP_128810504.1;Name=WP_128810504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006069141.1;locus_tag=VA249_RS09885;product=ferredoxin family protein;protein_id=WP_128810504.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2157461 2158195 . - . ID=gene-VA249_RS09890;Name=VA249_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09890;old_locus_tag=VYA_18660 NZ_AP024165.1 Protein Homology CDS 2157461 2158195 . - 0 ID=cds-WP_221067871.1;Parent=gene-VA249_RS09890;Dbxref=Genbank:WP_221067871.1;Name=WP_221067871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332836.1;locus_tag=VA249_RS09890;product=RNA methyltransferase;protein_id=WP_221067871.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2158325 2158421 . - . ID=gene-VA249_RS09895;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=VA249_RS09895 NZ_AP024165.1 cmsearch SRP_RNA 2158325 2158421 . - . ID=rna-VA249_RS09895;Parent=gene-VA249_RS09895;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS09895;product=signal recognition particle sRNA small type NZ_AP024165.1 cmsearch exon 2158325 2158421 . - . ID=exon-VA249_RS09895-1;Parent=rna-VA249_RS09895;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS09895;product=signal recognition particle sRNA small type NZ_AP024165.1 RefSeq gene 2158549 2160561 . - . ID=gene-VA249_RS09900;Name=VA249_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09900;old_locus_tag=VYA_18670 NZ_AP024165.1 Protein Homology CDS 2158549 2160561 . - 0 ID=cds-WP_221069919.1;Parent=gene-VA249_RS09900;Dbxref=Genbank:WP_221069919.1;Name=WP_221069919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012127338.1;locus_tag=VA249_RS09900;product=GGDEF domain-containing protein;protein_id=WP_221069919.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2160821 2161564 . - . ID=gene-VA249_RS09905;Name=VA249_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09905;old_locus_tag=VYA_18680 NZ_AP024165.1 Protein Homology CDS 2160821 2161564 . - 0 ID=cds-WP_221067880.1;Parent=gene-VA249_RS09905;Dbxref=Genbank:WP_221067880.1;Name=WP_221067880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461144.1;locus_tag=VA249_RS09905;product=hypothetical protein;protein_id=WP_221067880.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2161835 2162137 . + . ID=gene-VA249_RS09910;Name=VA249_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09910;old_locus_tag=VYA_18690 NZ_AP024165.1 Protein Homology CDS 2161835 2162137 . + 0 ID=cds-WP_221067881.1;Parent=gene-VA249_RS09910;Dbxref=Genbank:WP_221067881.1;Name=WP_221067881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461131.1;locus_tag=VA249_RS09910;product=DNA base-flipping protein;protein_id=WP_221067881.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2162169 2162603 . - . ID=gene-VA249_RS09915;Name=VA249_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09915;old_locus_tag=VYA_18700 NZ_AP024165.1 Protein Homology CDS 2162169 2162603 . - 0 ID=cds-WP_128810500.1;Parent=gene-VA249_RS09915;Dbxref=Genbank:WP_128810500.1;Name=WP_128810500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461146.1;locus_tag=VA249_RS09915;product=YbaY family lipoprotein;protein_id=WP_128810500.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2162772 2163632 . + . ID=gene-VA249_RS09920;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=VA249_RS09920;old_locus_tag=VYA_18710 NZ_AP024165.1 Protein Homology CDS 2162772 2163632 . + 0 ID=cds-WP_221067882.1;Parent=gene-VA249_RS09920;Dbxref=Genbank:WP_221067882.1;Name=WP_221067882.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439587.1;locus_tag=VA249_RS09920;product=acyl-CoA thioesterase II;protein_id=WP_221067882.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2163790 2164254 . - . ID=gene-VA249_RS09925;Name=VA249_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09925;old_locus_tag=VYA_18720 NZ_AP024165.1 Protein Homology CDS 2163790 2164254 . - 0 ID=cds-WP_128810498.1;Parent=gene-VA249_RS09925;Dbxref=Genbank:WP_128810498.1;Name=WP_128810498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447078.1;locus_tag=VA249_RS09925;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_128810498.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2164398 2165492 . + . ID=gene-VA249_RS09930;Name=VA249_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09930;old_locus_tag=VYA_18730 NZ_AP024165.1 Protein Homology CDS 2164398 2165492 . + 0 ID=cds-WP_221067883.1;Parent=gene-VA249_RS09930;Dbxref=Genbank:WP_221067883.1;Name=WP_221067883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446623.1;locus_tag=VA249_RS09930;product=PLP-dependent cysteine synthase family protein;protein_id=WP_221067883.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2165697 2166014 . - . ID=gene-VA249_RS09935;Name=VA249_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09935;old_locus_tag=VYA_18740 NZ_AP024165.1 Protein Homology CDS 2165697 2166014 . - 0 ID=cds-WP_221067885.1;Parent=gene-VA249_RS09935;Dbxref=Genbank:WP_221067885.1;Name=WP_221067885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005473015.1;locus_tag=VA249_RS09935;product=DUF1244 domain-containing protein;protein_id=WP_221067885.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2166231 2166806 . + . ID=gene-VA249_RS09940;Name=VA249_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09940;old_locus_tag=VYA_18750 NZ_AP024165.1 Protein Homology CDS 2166231 2166806 . + 0 ID=cds-WP_221067886.1;Parent=gene-VA249_RS09940;Dbxref=Genbank:WP_221067886.1;Name=WP_221067886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634755.1;locus_tag=VA249_RS09940;product=outer membrane beta-barrel protein;protein_id=WP_221067886.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2166910 2168601 . - . ID=gene-VA249_RS09945;Name=VA249_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09945;old_locus_tag=VYA_18760 NZ_AP024165.1 Protein Homology CDS 2166910 2168601 . - 0 ID=cds-WP_221067887.1;Parent=gene-VA249_RS09945;Dbxref=Genbank:WP_221067887.1;Name=WP_221067887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275312.1;locus_tag=VA249_RS09945;product=mechanosensitive ion channel;protein_id=WP_221067887.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2168949 2170343 . + . ID=gene-VA249_RS09950;Name=VA249_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09950;old_locus_tag=VYA_18770 NZ_AP024165.1 Protein Homology CDS 2168949 2170343 . + 0 ID=cds-WP_221067888.1;Parent=gene-VA249_RS09950;Dbxref=Genbank:WP_221067888.1;Name=WP_221067888.1;Ontology_term=GO:0006540,GO:0004351;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA;go_process=glutamate decarboxylation to succinate|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439770.1;locus_tag=VA249_RS09950;product=glutamate decarboxylase;protein_id=WP_221067888.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2170544 2172271 . + . ID=gene-VA249_RS09955;Name=VA249_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09955;old_locus_tag=VYA_18780 NZ_AP024165.1 Protein Homology CDS 2170544 2172271 . + 0 ID=cds-WP_221067889.1;Parent=gene-VA249_RS09955;Dbxref=Genbank:WP_221067889.1;Name=WP_221067889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532654.1;locus_tag=VA249_RS09955;product=transporter;protein_id=WP_221067889.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2172361 2172612 . + . ID=gene-VA249_RS09960;Name=VA249_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09960;old_locus_tag=VYA_18790 NZ_AP024165.1 Protein Homology CDS 2172361 2172612 . + 0 ID=cds-WP_128810493.1;Parent=gene-VA249_RS09960;Dbxref=Genbank:WP_128810493.1;Name=WP_128810493.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432892.1;locus_tag=VA249_RS09960;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_128810493.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2172745 2173185 . - . ID=gene-VA249_RS09965;Name=VA249_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09965;old_locus_tag=VYA_18800 NZ_AP024165.1 Protein Homology CDS 2172745 2173185 . - 0 ID=cds-WP_128810492.1;Parent=gene-VA249_RS09965;Dbxref=Genbank:WP_128810492.1;Name=WP_128810492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460092.1;locus_tag=VA249_RS09965;product=YcgN family cysteine cluster protein;protein_id=WP_128810492.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2173374 2173622 . + . ID=gene-VA249_RS09970;Name=VA249_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09970;old_locus_tag=VYA_18810 NZ_AP024165.1 Protein Homology CDS 2173374 2173622 . + 0 ID=cds-WP_221069921.1;Parent=gene-VA249_RS09970;Dbxref=Genbank:WP_221069921.1;Name=WP_221069921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820793.1;locus_tag=VA249_RS09970;product=YkgJ family cysteine cluster protein;protein_id=WP_221069921.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2173812 2174510 . + . ID=gene-VA249_RS09975;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=VA249_RS09975;old_locus_tag=VYA_18820 NZ_AP024165.1 Protein Homology CDS 2173812 2174510 . + 0 ID=cds-WP_128810491.1;Parent=gene-VA249_RS09975;Dbxref=Genbank:WP_128810491.1;Name=WP_128810491.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698545.1;locus_tag=VA249_RS09975;product=aquaporin Z;protein_id=WP_128810491.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2174552 2175151 . - . ID=gene-VA249_RS09980;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=VA249_RS09980;old_locus_tag=VYA_18830 NZ_AP024165.1 Protein Homology CDS 2174552 2175151 . - 0 ID=cds-WP_128810490.1;Parent=gene-VA249_RS09980;Dbxref=Genbank:WP_128810490.1;Name=WP_128810490.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740649.1;locus_tag=VA249_RS09980;product=recombination mediator RecR;protein_id=WP_128810490.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2175182 2175511 . - . ID=gene-VA249_RS09985;Name=VA249_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS09985;old_locus_tag=VYA_18840 NZ_AP024165.1 Protein Homology CDS 2175182 2175511 . - 0 ID=cds-WP_005460082.1;Parent=gene-VA249_RS09985;Dbxref=Genbank:WP_005460082.1;Name=WP_005460082.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020431703.1;locus_tag=VA249_RS09985;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_005460082.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2175594 2177762 . - . ID=gene-VA249_RS09990;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=VA249_RS09990;old_locus_tag=VYA_18850 NZ_AP024165.1 Protein Homology CDS 2175594 2177762 . - 0 ID=cds-WP_221067890.1;Parent=gene-VA249_RS09990;Dbxref=Genbank:WP_221067890.1;Name=WP_221067890.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452083.1;locus_tag=VA249_RS09990;product=DNA polymerase III subunit gamma/tau;protein_id=WP_221067890.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2177771 2178316 . - . ID=gene-VA249_RS09995;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=VA249_RS09995;old_locus_tag=VYA_18860 NZ_AP024165.1 Protein Homology CDS 2177771 2178316 . - 0 ID=cds-WP_128810488.1;Parent=gene-VA249_RS09995;Dbxref=Genbank:WP_128810488.1;Name=WP_128810488.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020198027.1;locus_tag=VA249_RS09995;product=adenine phosphoribosyltransferase;protein_id=WP_128810488.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2178482 2178886 . - . ID=gene-VA249_RS10000;Name=VA249_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10000;old_locus_tag=VYA_18870 NZ_AP024165.1 Protein Homology CDS 2178482 2178886 . - 0 ID=cds-WP_221067891.1;Parent=gene-VA249_RS10000;Dbxref=Genbank:WP_221067891.1;Name=WP_221067891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460100.1;locus_tag=VA249_RS10000;product=YbaN family protein;protein_id=WP_221067891.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2178902 2179033 . - . ID=gene-VA249_RS24220;Name=VA249_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24220 NZ_AP024165.1 Protein Homology CDS 2178902 2179033 . - 0 ID=cds-WP_256997349.1;Parent=gene-VA249_RS24220;Dbxref=Genbank:WP_256997349.1;Name=WP_256997349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013197.1;locus_tag=VA249_RS24220;product=hypothetical protein;protein_id=WP_256997349.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2179271 2180377 . - . ID=gene-VA249_RS10005;Name=VA249_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10005;old_locus_tag=VYA_18880 NZ_AP024165.1 Protein Homology CDS 2179271 2180377 . - 0 ID=cds-WP_221067892.1;Parent=gene-VA249_RS10005;Dbxref=Genbank:WP_221067892.1;Name=WP_221067892.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079896.1;locus_tag=VA249_RS10005;product=response regulator;protein_id=WP_221067892.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2180659 2181534 . + . ID=gene-VA249_RS10010;Name=VA249_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10010;old_locus_tag=VYA_18890 NZ_AP024165.1 Protein Homology CDS 2180659 2181534 . + 0 ID=cds-WP_221069922.1;Parent=gene-VA249_RS10010;Dbxref=Genbank:WP_221069922.1;Name=WP_221069922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397211.1;locus_tag=VA249_RS10010;product=LysR family transcriptional regulator;protein_id=WP_221069922.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2181616 2183130 . - . ID=gene-VA249_RS10015;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=VA249_RS10015;old_locus_tag=VYA_18900 NZ_AP024165.1 Protein Homology CDS 2181616 2183130 . - 0 ID=cds-WP_221067893.1;Parent=gene-VA249_RS10015;Dbxref=Genbank:WP_221067893.1;Name=WP_221067893.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017106165.1;locus_tag=VA249_RS10015;product=amidophosphoribosyltransferase;protein_id=WP_221067893.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2183164 2183658 . - . ID=gene-VA249_RS10020;Name=VA249_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10020;old_locus_tag=VYA_18910 NZ_AP024165.1 Protein Homology CDS 2183164 2183658 . - 0 ID=cds-WP_211916234.1;Parent=gene-VA249_RS10020;Dbxref=Genbank:WP_211916234.1;Name=WP_211916234.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104252.1;locus_tag=VA249_RS10020;product=CvpA family protein;protein_id=WP_211916234.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2183720 2184313 . - . ID=gene-VA249_RS10025;Name=VA249_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10025;old_locus_tag=VYA_18920 NZ_AP024165.1 Protein Homology CDS 2183720 2184313 . - 0 ID=cds-WP_221067894.1;Parent=gene-VA249_RS10025;Dbxref=Genbank:WP_221067894.1;Name=WP_221067894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017062346.1;locus_tag=VA249_RS10025;product=SPOR domain-containing protein;protein_id=WP_221067894.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2184328 2185590 . - . ID=gene-VA249_RS10030;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=VA249_RS10030;old_locus_tag=VYA_18930 NZ_AP024165.1 Protein Homology CDS 2184328 2185590 . - 0 ID=cds-WP_221067895.1;Parent=gene-VA249_RS10030;Dbxref=Genbank:WP_221067895.1;Name=WP_221067895.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817813.1;locus_tag=VA249_RS10030;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_221067895.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2185636 2186562 . - . ID=gene-VA249_RS10035;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=VA249_RS10035;old_locus_tag=VYA_18940 NZ_AP024165.1 Protein Homology CDS 2185636 2186562 . - 0 ID=cds-WP_221067896.1;Parent=gene-VA249_RS10035;Dbxref=Genbank:WP_221067896.1;Name=WP_221067896.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439795.1;locus_tag=VA249_RS10035;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_221067896.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2186758 2187552 . - . ID=gene-VA249_RS10040;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=VA249_RS10040;old_locus_tag=VYA_18950 NZ_AP024165.1 Protein Homology CDS 2186758 2187552 . - 0 ID=cds-WP_128810482.1;Parent=gene-VA249_RS10040;Dbxref=Genbank:WP_128810482.1;Name=WP_128810482.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079889.1;locus_tag=VA249_RS10040;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_128810482.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2187679 2191893 . - . ID=gene-VA249_RS10045;Name=VA249_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10045;old_locus_tag=VYA_18960 NZ_AP024165.1 Protein Homology CDS 2187679 2191893 . - 0 ID=cds-WP_221067897.1;Parent=gene-VA249_RS10045;Dbxref=Genbank:WP_221067897.1;Name=WP_221067897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494419.1;locus_tag=VA249_RS10045;product=AAA family ATPase;protein_id=WP_221067897.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2192093 2193106 . - . ID=gene-VA249_RS10050;Name=VA249_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10050;old_locus_tag=VYA_18970 NZ_AP024165.1 Protein Homology CDS 2192093 2193106 . - 0 ID=cds-WP_128810481.1;Parent=gene-VA249_RS10050;Dbxref=Genbank:WP_128810481.1;Name=WP_128810481.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019829353.1;locus_tag=VA249_RS10050;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_128810481.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2193103 2194236 . - . ID=gene-VA249_RS10055;Name=VA249_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10055;old_locus_tag=VYA_18980 NZ_AP024165.1 Protein Homology CDS 2193103 2194236 . - 0 ID=cds-WP_221067898.1;Parent=gene-VA249_RS10055;Dbxref=Genbank:WP_221067898.1;Name=WP_221067898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334568.1;locus_tag=VA249_RS10055;product=4-phosphoerythronate dehydrogenase;protein_id=WP_221067898.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2194555 2195766 . - . ID=gene-VA249_RS10060;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=VA249_RS10060;old_locus_tag=VYA_18990 NZ_AP024165.1 Protein Homology CDS 2194555 2195766 . - 0 ID=cds-WP_221067900.1;Parent=gene-VA249_RS10060;Dbxref=Genbank:WP_221067900.1;Name=WP_221067900.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017629930.1;locus_tag=VA249_RS10060;product=beta-ketoacyl-ACP synthase I;protein_id=WP_221067900.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2195895 2197913 . + . ID=gene-VA249_RS10065;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=VA249_RS10065;old_locus_tag=VYA_19000 NZ_AP024165.1 Protein Homology CDS 2195895 2197913 . + 0 ID=cds-WP_221067902.1;Parent=gene-VA249_RS10065;Dbxref=Genbank:WP_221067902.1;Name=WP_221067902.1;Ontology_term=GO:0008033,GO:0004808;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079884.1;locus_tag=VA249_RS10065;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_221067902.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2198048 2198572 . - . ID=gene-VA249_RS10070;Name=VA249_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10070;old_locus_tag=VYA_19010 NZ_AP024165.1 Protein Homology CDS 2198048 2198572 . - 0 ID=cds-WP_221067904.1;Parent=gene-VA249_RS10070;Dbxref=Genbank:WP_221067904.1;Name=WP_221067904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447801.1;locus_tag=VA249_RS10070;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_221067904.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2198700 2198963 . - . ID=gene-VA249_RS10075;Name=VA249_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10075;old_locus_tag=VYA_19020 NZ_AP024165.1 Protein Homology CDS 2198700 2198963 . - 0 ID=cds-WP_128810468.1;Parent=gene-VA249_RS10075;Dbxref=Genbank:WP_128810468.1;Name=WP_128810468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737967.1;locus_tag=VA249_RS10075;product=YfcL family protein;protein_id=WP_128810468.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2198978 2199508 . - . ID=gene-VA249_RS10080;Name=VA249_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10080;old_locus_tag=VYA_19030 NZ_AP024165.1 Protein Homology CDS 2198978 2199508 . - 0 ID=cds-WP_221069924.1;Parent=gene-VA249_RS10080;Dbxref=Genbank:WP_221069924.1;Name=WP_221069924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707346.1;locus_tag=VA249_RS10080;product=elongation factor P hydroxylase;protein_id=WP_221069924.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2199832 2200455 . + . ID=gene-VA249_RS10085;Name=VA249_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10085;old_locus_tag=VYA_19040 NZ_AP024165.1 Protein Homology CDS 2199832 2200455 . + 0 ID=cds-WP_128810467.1;Parent=gene-VA249_RS10085;Dbxref=Genbank:WP_128810467.1;Name=WP_128810467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737963.1;locus_tag=VA249_RS10085;product=trimeric intracellular cation channel family protein;protein_id=WP_128810467.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2200545 2201630 . - . ID=gene-VA249_RS10090;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=VA249_RS10090;old_locus_tag=VYA_19050 NZ_AP024165.1 Protein Homology CDS 2200545 2201630 . - 0 ID=cds-WP_128810466.1;Parent=gene-VA249_RS10090;Dbxref=Genbank:WP_128810466.1;Name=WP_128810466.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918437.1;locus_tag=VA249_RS10090;product=chorismate synthase;protein_id=WP_128810466.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2201884 2202816 . - . ID=gene-VA249_RS10095;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=VA249_RS10095;old_locus_tag=VYA_19060 NZ_AP024165.1 Protein Homology CDS 2201884 2202816 . - 0 ID=cds-WP_128810465.1;Parent=gene-VA249_RS10095;Dbxref=Genbank:WP_128810465.1;Name=WP_128810465.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128613.1;locus_tag=VA249_RS10095;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_128810465.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2202878 2203408 . + . ID=gene-VA249_RS10100;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=VA249_RS10100;old_locus_tag=VYA_19070 NZ_AP024165.1 Protein Homology CDS 2202878 2203408 . + 0 ID=cds-WP_211916215.1;Parent=gene-VA249_RS10100;Dbxref=Genbank:WP_211916215.1;Name=WP_211916215.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150890.1;locus_tag=VA249_RS10100;product=endonuclease SmrB;protein_id=WP_211916215.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2203548 2204012 . - . ID=gene-VA249_RS10105;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=VA249_RS10105;old_locus_tag=VYA_19080 NZ_AP024165.1 Protein Homology CDS 2203548 2204012 . - 0 ID=cds-WP_221067906.1;Parent=gene-VA249_RS10105;Dbxref=Genbank:WP_221067906.1;Name=WP_221067906.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397904.1;locus_tag=VA249_RS10105;product=phosphohistidine phosphatase SixA;protein_id=WP_221067906.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2204403 2207264 . + . ID=gene-VA249_RS10110;Name=VA249_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10110;old_locus_tag=VYA_19090 NZ_AP024165.1 Protein Homology CDS 2204403 2207264 . + 0 ID=cds-WP_221067909.1;Parent=gene-VA249_RS10110;Dbxref=Genbank:WP_221067909.1;Name=WP_221067909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643374.1;locus_tag=VA249_RS10110;product=insulinase family protein;protein_id=WP_221067909.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2207367 2207618 . + . ID=gene-VA249_RS10115;Name=VA249_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10115;old_locus_tag=VYA_19100 NZ_AP024165.1 Protein Homology CDS 2207367 2207618 . + 0 ID=cds-WP_221069925.1;Parent=gene-VA249_RS10115;Dbxref=Genbank:WP_221069925.1;Name=WP_221069925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707352.1;locus_tag=VA249_RS10115;product=CG2 omega domain protein;protein_id=WP_221069925.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2207862 2209976 . - . ID=gene-VA249_RS10120;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=VA249_RS10120;old_locus_tag=VYA_19110 NZ_AP024165.1 Protein Homology CDS 2207862 2209976 . - 0 ID=cds-WP_221067910.1;Parent=gene-VA249_RS10120;Dbxref=Genbank:WP_221067910.1;Name=WP_221067910.1;Ontology_term=GO:0006635,GO:0003857,GO:0008692,GO:0016491,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128616.1;locus_tag=VA249_RS10120;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_221067910.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2209976 2211283 . - . ID=gene-VA249_RS10125;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=VA249_RS10125;old_locus_tag=VYA_19120 NZ_AP024165.1 Protein Homology CDS 2209976 2211283 . - 0 ID=cds-WP_221067911.1;Parent=gene-VA249_RS10125;Dbxref=Genbank:WP_221067911.1;Name=WP_221067911.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527754.1;locus_tag=VA249_RS10125;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_221067911.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2211905 2212468 . + . ID=gene-VA249_RS10130;Name=VA249_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10130;old_locus_tag=VYA_19130 NZ_AP024165.1 Protein Homology CDS 2211905 2212468 . + 0 ID=cds-WP_128810461.1;Parent=gene-VA249_RS10130;Dbxref=Genbank:WP_128810461.1;Name=WP_128810461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013571313.1;locus_tag=VA249_RS10130;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_128810461.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2212461 2213195 . + . ID=gene-VA249_RS10135;Name=VA249_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10135;old_locus_tag=VYA_19140 NZ_AP024165.1 Protein Homology CDS 2212461 2213195 . + 0 ID=cds-WP_221067912.1;Parent=gene-VA249_RS10135;Dbxref=Genbank:WP_221067912.1;Name=WP_221067912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006959410.1;locus_tag=VA249_RS10135;product=DUF3379 family protein;protein_id=WP_221067912.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2213489 2214772 . + . ID=gene-VA249_RS10140;Name=VA249_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10140;old_locus_tag=VYA_19150 NZ_AP024165.1 Protein Homology CDS 2213489 2214772 . + 0 ID=cds-WP_221067913.1;Parent=gene-VA249_RS10140;Dbxref=Genbank:WP_221067913.1;Name=WP_221067913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128619.1;locus_tag=VA249_RS10140;product=OmpP1/FadL family transporter;protein_id=WP_221067913.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2215082 2216377 . + . ID=gene-VA249_RS10145;Name=VA249_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10145;old_locus_tag=VYA_19160 NZ_AP024165.1 Protein Homology CDS 2215082 2216377 . + 0 ID=cds-WP_221067914.1;Parent=gene-VA249_RS10145;Dbxref=Genbank:WP_221067914.1;Name=WP_221067914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643381.1;locus_tag=VA249_RS10145;product=OmpP1/FadL family transporter;protein_id=WP_221067914.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2216466 2217245 . - . ID=gene-VA249_RS10150;Name=VA249_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10150;old_locus_tag=VYA_19170 NZ_AP024165.1 Protein Homology CDS 2216466 2217245 . - 0 ID=cds-WP_221067915.1;Parent=gene-VA249_RS10150;Dbxref=Genbank:WP_221067915.1;Name=WP_221067915.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449573.1;locus_tag=VA249_RS10150;product=MlaA family lipoprotein;protein_id=WP_221067915.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2217379 2218596 . - . ID=gene-VA249_RS10155;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=VA249_RS10155;old_locus_tag=VYA_19180 NZ_AP024165.1 Protein Homology CDS 2217379 2218596 . - 0 ID=cds-WP_221067916.1;Parent=gene-VA249_RS10155;Dbxref=Genbank:WP_221067916.1;Name=WP_221067916.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494385.1;locus_tag=VA249_RS10155;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_221067916.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2218596 2219081 . - . ID=gene-VA249_RS10160;Name=VA249_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10160;old_locus_tag=VYA_19190 NZ_AP024165.1 Protein Homology CDS 2218596 2219081 . - 0 ID=cds-WP_221067917.1;Parent=gene-VA249_RS10160;Dbxref=Genbank:WP_221067917.1;Name=WP_221067917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334586.1;locus_tag=VA249_RS10160;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_221067917.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2219078 2219632 . - . ID=gene-VA249_RS10165;Name=VA249_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10165;old_locus_tag=VYA_19200 NZ_AP024165.1 Protein Homology CDS 2219078 2219632 . - 0 ID=cds-WP_221067918.1;Parent=gene-VA249_RS10165;Dbxref=Genbank:WP_221067918.1;Name=WP_221067918.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394296.1;locus_tag=VA249_RS10165;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_221067918.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2219634 2221616 . - . ID=gene-VA249_RS10170;Name=VA249_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10170;old_locus_tag=VYA_19210 NZ_AP024165.1 Protein Homology CDS 2219634 2221616 . - 0 ID=cds-WP_221067919.1;Parent=gene-VA249_RS10170;Dbxref=Genbank:WP_221067919.1;Name=WP_221067919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707360.1;locus_tag=VA249_RS10170;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_221067919.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2221613 2222098 . - . ID=gene-VA249_RS10175;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=VA249_RS10175;old_locus_tag=VYA_19220 NZ_AP024165.1 Protein Homology CDS 2221613 2222098 . - 0 ID=cds-WP_211916203.1;Parent=gene-VA249_RS10175;Dbxref=Genbank:WP_211916203.1;Name=WP_211916203.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848524.1;locus_tag=VA249_RS10175;product=cytochrome c maturation protein CcmE;protein_id=WP_211916203.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2222095 2222301 . - . ID=gene-VA249_RS10180;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=VA249_RS10180;old_locus_tag=VYA_19230 NZ_AP024165.1 Protein Homology CDS 2222095 2222301 . - 0 ID=cds-WP_128810451.1;Parent=gene-VA249_RS10180;Dbxref=Genbank:WP_128810451.1;Name=WP_128810451.1;Ontology_term=GO:0015886,GO:0017004,GO:0016021;gbkey=CDS;gene=ccmD;go_component=integral component of membrane|0016021||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017093150.1;locus_tag=VA249_RS10180;product=heme exporter protein CcmD;protein_id=WP_128810451.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2222314 2223057 . - . ID=gene-VA249_RS10185;Name=VA249_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10185;old_locus_tag=VYA_19240 NZ_AP024165.1 Protein Homology CDS 2222314 2223057 . - 0 ID=cds-WP_211916201.1;Parent=gene-VA249_RS10185;Dbxref=Genbank:WP_211916201.1;Name=WP_211916201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232641.1;locus_tag=VA249_RS10185;product=heme ABC transporter permease;protein_id=WP_211916201.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2223167 2223835 . - . ID=gene-VA249_RS10190;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=VA249_RS10190;old_locus_tag=VYA_19250 NZ_AP024165.1 Protein Homology CDS 2223167 2223835 . - 0 ID=cds-WP_128810450.1;Parent=gene-VA249_RS10190;Dbxref=Genbank:WP_128810450.1;Name=WP_128810450.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017052478.1;locus_tag=VA249_RS10190;product=heme exporter protein CcmB;protein_id=WP_128810450.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2223837 2224454 . - . ID=gene-VA249_RS10195;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=VA249_RS10195;old_locus_tag=VYA_19260 NZ_AP024165.1 Protein Homology CDS 2223837 2224454 . - 0 ID=cds-WP_221067920.1;Parent=gene-VA249_RS10195;Dbxref=Genbank:WP_221067920.1;Name=WP_221067920.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079860.1;locus_tag=VA249_RS10195;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_221067920.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2224651 2225142 . - . ID=gene-VA249_RS10200;Name=VA249_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10200;old_locus_tag=VYA_19270 NZ_AP024165.1 Protein Homology CDS 2224651 2225142 . - 0 ID=cds-WP_221067921.1;Parent=gene-VA249_RS10200;Dbxref=Genbank:WP_221067921.1;Name=WP_221067921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643399.1;locus_tag=VA249_RS10200;product=DUF2802 domain-containing protein;protein_id=WP_221067921.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2225156 2225650 . - . ID=gene-VA249_RS10205;Name=VA249_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10205;old_locus_tag=VYA_19280 NZ_AP024165.1 Protein Homology CDS 2225156 2225650 . - 0 ID=cds-WP_038864816.1;Parent=gene-VA249_RS10205;Dbxref=Genbank:WP_038864816.1;Name=WP_038864816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075895.1;locus_tag=VA249_RS10205;product=chemotaxis protein CheW;protein_id=WP_038864816.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2225686 2226810 . - . ID=gene-VA249_RS10210;Name=VA249_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10210;old_locus_tag=VYA_19290 NZ_AP024165.1 Protein Homology CDS 2225686 2226810 . - 0 ID=cds-WP_221067922.1;Parent=gene-VA249_RS10210;Dbxref=Genbank:WP_221067922.1;Name=WP_221067922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707366.1;locus_tag=VA249_RS10210;product=chemotaxis protein CheW;protein_id=WP_221067922.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2226803 2227579 . - . ID=gene-VA249_RS10215;Name=VA249_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10215;old_locus_tag=VYA_19300 NZ_AP024165.1 Protein Homology CDS 2226803 2227579 . - 0 ID=cds-WP_211916197.1;Parent=gene-VA249_RS10215;Dbxref=Genbank:WP_211916197.1;Name=WP_211916197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006710265.1;locus_tag=VA249_RS10215;product=ParA family protein;protein_id=WP_211916197.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2227588 2228712 . - . ID=gene-VA249_RS10220;Name=VA249_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10220;old_locus_tag=VYA_19310 NZ_AP024165.1 Protein Homology CDS 2227588 2228712 . - 0 ID=cds-WP_221067923.1;Parent=gene-VA249_RS10220;Dbxref=Genbank:WP_221067923.1;Name=WP_221067923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079855.1;locus_tag=VA249_RS10220;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_221067923.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2228742 2231033 . - . ID=gene-VA249_RS10225;Name=VA249_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10225;old_locus_tag=VYA_19320 NZ_AP024165.1 Protein Homology CDS 2228742 2231033 . - 0 ID=cds-WP_221067924.1;Parent=gene-VA249_RS10225;Dbxref=Genbank:WP_221067924.1;Name=WP_221067924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696005.1;locus_tag=VA249_RS10225;product=chemotaxis protein CheA;protein_id=WP_221067924.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2231043 2231783 . - . ID=gene-VA249_RS10230;Name=VA249_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10230;old_locus_tag=VYA_19330 NZ_AP024165.1 Protein Homology CDS 2231043 2231783 . - 0 ID=cds-WP_128810444.1;Parent=gene-VA249_RS10230;Dbxref=Genbank:WP_128810444.1;Name=WP_128810444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439383.1;locus_tag=VA249_RS10230;product=protein phosphatase CheZ;protein_id=WP_128810444.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2231904 2232272 . - . ID=gene-VA249_RS10235;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=VA249_RS10235;old_locus_tag=VYA_19340 NZ_AP024165.1 Protein Homology CDS 2231904 2232272 . - 0 ID=cds-WP_020333593.1;Parent=gene-VA249_RS10235;Dbxref=Genbank:WP_020333593.1;Name=WP_020333593.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006879571.1;locus_tag=VA249_RS10235;product=chemotaxis response regulator CheY;protein_id=WP_020333593.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2232317 2233051 . - . ID=gene-VA249_RS10240;Name=VA249_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10240;old_locus_tag=VYA_19350 NZ_AP024165.1 Protein Homology CDS 2232317 2233051 . - 0 ID=cds-WP_128810443.1;Parent=gene-VA249_RS10240;Dbxref=Genbank:WP_128810443.1;Name=WP_128810443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030417.1;locus_tag=VA249_RS10240;product=RNA polymerase sigma factor FliA;protein_id=WP_128810443.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2233044 2233931 . - . ID=gene-VA249_RS10245;Name=VA249_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10245;old_locus_tag=VYA_19360 NZ_AP024165.1 Protein Homology CDS 2233044 2233931 . - 0 ID=cds-WP_211916193.1;Parent=gene-VA249_RS10245;Dbxref=Genbank:WP_211916193.1;Name=WP_211916193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017073191.1;locus_tag=VA249_RS10245;product=MinD/ParA family protein;protein_id=WP_211916193.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2233946 2235535 . - . ID=gene-VA249_RS10250;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=VA249_RS10250;old_locus_tag=VYA_19370 NZ_AP024165.1 Protein Homology CDS 2233946 2235535 . - 0 ID=cds-WP_221067925.1;Parent=gene-VA249_RS10250;Dbxref=Genbank:WP_221067925.1;Name=WP_221067925.1;Ontology_term=GO:0006614,GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196565.1;locus_tag=VA249_RS10250;product=flagellar biosynthesis protein FlhF;protein_id=WP_221067925.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2235563 2237662 . - . ID=gene-VA249_RS10255;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=VA249_RS10255;old_locus_tag=VYA_19380 NZ_AP024165.1 Protein Homology CDS 2235563 2237662 . - 0 ID=cds-WP_221067926.1;Parent=gene-VA249_RS10255;Dbxref=Genbank:WP_221067926.1;Name=WP_221067926.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019277846.1;locus_tag=VA249_RS10255;product=flagellar biosynthesis protein FlhA;protein_id=WP_221067926.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2237866 2238996 . - . ID=gene-VA249_RS10260;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=VA249_RS10260;old_locus_tag=VYA_19390 NZ_AP024165.1 Protein Homology CDS 2237866 2238996 . - 0 ID=cds-WP_128810440.1;Parent=gene-VA249_RS10260;Dbxref=Genbank:WP_128810440.1;Name=WP_128810440.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736213.1;locus_tag=VA249_RS10260;product=flagellar biosynthesis protein FlhB;protein_id=WP_128810440.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2239021 2239803 . - . ID=gene-VA249_RS10265;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=VA249_RS10265;old_locus_tag=VYA_19400 NZ_AP024165.1 Protein Homology CDS 2239021 2239803 . - 0 ID=cds-WP_128810439.1;Parent=gene-VA249_RS10265;Dbxref=Genbank:WP_128810439.1;Name=WP_128810439.1;Ontology_term=GO:0006605,GO:0044780,GO:0016021;gbkey=CDS;gene=fliR;go_component=integral component of membrane|0016021||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004739855.1;locus_tag=VA249_RS10265;product=flagellar biosynthetic protein FliR;protein_id=WP_128810439.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2239812 2240081 . - . ID=gene-VA249_RS10270;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=VA249_RS10270;old_locus_tag=VYA_19410 NZ_AP024165.1 Protein Homology CDS 2239812 2240081 . - 0 ID=cds-WP_128810438.1;Parent=gene-VA249_RS10270;Dbxref=Genbank:WP_128810438.1;Name=WP_128810438.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842533.1;locus_tag=VA249_RS10270;product=flagellar biosynthesis protein FliQ;protein_id=WP_128810438.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2240109 2240978 . - . ID=gene-VA249_RS10275;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=VA249_RS10275;old_locus_tag=VYA_19420 NZ_AP024165.1 Protein Homology CDS 2240109 2240978 . - 0 ID=cds-WP_221067927.1;Parent=gene-VA249_RS10275;Dbxref=Genbank:WP_221067927.1;Name=WP_221067927.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005481091.1;locus_tag=VA249_RS10275;product=flagellar type III secretion system pore protein FliP;protein_id=WP_221067927.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2240965 2241378 . - . ID=gene-VA249_RS10280;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=VA249_RS10280;old_locus_tag=VYA_19430 NZ_AP024165.1 Protein Homology CDS 2240965 2241378 . - 0 ID=cds-WP_211916185.1;Parent=gene-VA249_RS10280;Dbxref=Genbank:WP_211916185.1;Name=WP_211916185.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433023.1;locus_tag=VA249_RS10280;product=flagellar biosynthetic protein FliO;protein_id=WP_211916185.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2241380 2241790 . - . ID=gene-VA249_RS10285;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=VA249_RS10285;old_locus_tag=VYA_19440 NZ_AP024165.1 Protein Homology CDS 2241380 2241790 . - 0 ID=cds-WP_128810436.1;Parent=gene-VA249_RS10285;Dbxref=Genbank:WP_128810436.1;Name=WP_128810436.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017056880.1;locus_tag=VA249_RS10285;product=flagellar motor switch protein FliN;protein_id=WP_128810436.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2241893 2242936 . - . ID=gene-VA249_RS10290;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=VA249_RS10290;old_locus_tag=VYA_19450 NZ_AP024165.1 Protein Homology CDS 2241893 2242936 . - 0 ID=cds-WP_211916184.1;Parent=gene-VA249_RS10290;Dbxref=Genbank:WP_211916184.1;Name=WP_211916184.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004739850.1;locus_tag=VA249_RS10290;product=flagellar motor switch protein FliM;protein_id=WP_211916184.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2242944 2243444 . - . ID=gene-VA249_RS10295;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=VA249_RS10295;old_locus_tag=VYA_19460 NZ_AP024165.1 Protein Homology CDS 2242944 2243444 . - 0 ID=cds-WP_221067928.1;Parent=gene-VA249_RS10295;Dbxref=Genbank:WP_221067928.1;Name=WP_221067928.1;Ontology_term=GO:0071973;gbkey=CDS;gene=fliL;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438693.1;locus_tag=VA249_RS10295;product=flagellar basal body-associated protein FliL;protein_id=WP_221067928.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2243545 2245563 . - . ID=gene-VA249_RS10300;Name=VA249_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10300;old_locus_tag=VYA_19470 NZ_AP024165.1 Protein Homology CDS 2243545 2245563 . - 0 ID=cds-WP_221067929.1;Parent=gene-VA249_RS10300;Dbxref=Genbank:WP_221067929.1;Name=WP_221067929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448371.1;locus_tag=VA249_RS10300;product=flagellar hook-length control protein FliK;protein_id=WP_221067929.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2245853 2246296 . - . ID=gene-VA249_RS10305;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=VA249_RS10305;old_locus_tag=VYA_19480 NZ_AP024165.1 Protein Homology CDS 2245853 2246296 . - 0 ID=cds-WP_128810434.1;Parent=gene-VA249_RS10305;Dbxref=Genbank:WP_128810434.1;Name=WP_128810434.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438686.1;locus_tag=VA249_RS10305;product=flagellar export protein FliJ;protein_id=WP_128810434.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2246303 2247622 . - . ID=gene-VA249_RS10310;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=VA249_RS10310;old_locus_tag=VYA_19490 NZ_AP024165.1 Protein Homology CDS 2246303 2247622 . - 0 ID=cds-WP_128810433.1;Parent=gene-VA249_RS10310;Dbxref=Genbank:WP_128810433.1;Name=WP_128810433.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017060680.1;locus_tag=VA249_RS10310;product=flagellar protein export ATPase FliI;protein_id=WP_128810433.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2247626 2248426 . - . ID=gene-VA249_RS10315;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=VA249_RS10315;old_locus_tag=VYA_19500 NZ_AP024165.1 Protein Homology CDS 2247626 2248426 . - 0 ID=cds-WP_221067930.1;Parent=gene-VA249_RS10315;Dbxref=Genbank:WP_221067930.1;Name=WP_221067930.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817800.1;locus_tag=VA249_RS10315;product=flagellar assembly protein FliH;protein_id=WP_221067930.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2248541 2249596 . - . ID=gene-VA249_RS10320;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=VA249_RS10320;old_locus_tag=VYA_19510 NZ_AP024165.1 Protein Homology CDS 2248541 2249596 . - 0 ID=cds-WP_221067931.1;Parent=gene-VA249_RS10320;Dbxref=Genbank:WP_221067931.1;Name=WP_221067931.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189307.1;locus_tag=VA249_RS10320;product=flagellar motor switch protein FliG;protein_id=WP_221067931.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2249589 2251331 . - . ID=gene-VA249_RS10325;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=VA249_RS10325;old_locus_tag=VYA_19520 NZ_AP024165.1 Protein Homology CDS 2249589 2251331 . - 0 ID=cds-WP_221067932.1;Parent=gene-VA249_RS10325;Dbxref=Genbank:WP_221067932.1;Name=WP_221067932.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457713.1;locus_tag=VA249_RS10325;product=flagellar M-ring protein FliF;protein_id=WP_221067932.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2251347 2251658 . - . ID=gene-VA249_RS10330;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=VA249_RS10330;old_locus_tag=VYA_19530 NZ_AP024165.1 Protein Homology CDS 2251347 2251658 . - 0 ID=cds-WP_128810430.1;Parent=gene-VA249_RS10330;Dbxref=Genbank:WP_128810430.1;Name=WP_128810430.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128639.1;locus_tag=VA249_RS10330;product=flagellar hook-basal body complex protein FliE;protein_id=WP_128810430.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2251784 2253193 . - . ID=gene-VA249_RS10335;Name=VA249_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10335;old_locus_tag=VYA_19540 NZ_AP024165.1 Protein Homology CDS 2251784 2253193 . - 0 ID=cds-WP_221067933.1;Parent=gene-VA249_RS10335;Dbxref=Genbank:WP_221067933.1;Name=WP_221067933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433086.1;locus_tag=VA249_RS10335;product=sigma-54 dependent transcriptional regulator;protein_id=WP_221067933.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2253223 2254254 . - . ID=gene-VA249_RS10340;Name=VA249_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10340;old_locus_tag=VYA_19550 NZ_AP024165.1 Protein Homology CDS 2253223 2254254 . - 0 ID=cds-WP_221067934.1;Parent=gene-VA249_RS10340;Dbxref=Genbank:WP_221067934.1;Name=WP_221067934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643429.1;locus_tag=VA249_RS10340;product=ATP-binding protein;protein_id=WP_221067934.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2254452 2255918 . - . ID=gene-VA249_RS10345;Name=VA249_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10345;old_locus_tag=VYA_19560 NZ_AP024165.1 Protein Homology CDS 2254452 2255918 . - 0 ID=cds-WP_221067935.1;Parent=gene-VA249_RS10345;Dbxref=Genbank:WP_221067935.1;Name=WP_221067935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010439319.1;locus_tag=VA249_RS10345;product=sigma-54 dependent transcriptional regulator;protein_id=WP_221067935.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2256201 2256611 . - . ID=gene-VA249_RS10350;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=VA249_RS10350;old_locus_tag=VYA_19570 NZ_AP024165.1 Protein Homology CDS 2256201 2256611 . - 0 ID=cds-WP_099079761.1;Parent=gene-VA249_RS10350;Dbxref=Genbank:WP_099079761.1;Name=WP_099079761.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128643.1;locus_tag=VA249_RS10350;product=flagellar export chaperone FliS;protein_id=WP_099079761.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2256624 2256929 . - . ID=gene-VA249_RS10355;Name=VA249_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10355;old_locus_tag=VYA_19580 NZ_AP024165.1 Protein Homology CDS 2256624 2256929 . - 0 ID=cds-WP_221067936.1;Parent=gene-VA249_RS10355;Dbxref=Genbank:WP_221067936.1;Name=WP_221067936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707378.1;locus_tag=VA249_RS10355;product=flagellar protein FliT;protein_id=WP_221067936.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2256933 2258936 . - . ID=gene-VA249_RS10360;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=VA249_RS10360;old_locus_tag=VYA_19590 NZ_AP024165.1 Protein Homology CDS 2256933 2258936 . - 0 ID=cds-WP_221067937.1;Parent=gene-VA249_RS10360;Dbxref=Genbank:WP_221067937.1;Name=WP_221067937.1;Ontology_term=GO:0007155,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820818.1;locus_tag=VA249_RS10360;product=flagellar filament capping protein FliD;protein_id=WP_221067937.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2258957 2259391 . - . ID=gene-VA249_RS10365;Name=flaG;gbkey=Gene;gene=flaG;gene_biotype=protein_coding;locus_tag=VA249_RS10365;old_locus_tag=VYA_19600 NZ_AP024165.1 Protein Homology CDS 2258957 2259391 . - 0 ID=cds-WP_221069927.1;Parent=gene-VA249_RS10365;Dbxref=Genbank:WP_221069927.1;Name=WP_221069927.1;gbkey=CDS;gene=flaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438662.1;locus_tag=VA249_RS10365;product=flagellar protein FlaG;protein_id=WP_221069927.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2259467 2260597 . - . ID=gene-VA249_RS10370;Name=VA249_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10370;old_locus_tag=VYA_19610 NZ_AP024165.1 Protein Homology CDS 2259467 2260597 . - 0 ID=cds-WP_221067938.1;Parent=gene-VA249_RS10370;Dbxref=Genbank:WP_221067938.1;Name=WP_221067938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_026028066.1;locus_tag=VA249_RS10370;product=flagellin;protein_id=WP_221067938.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2260888 2262021 . - . ID=gene-VA249_RS10375;Name=VA249_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10375;old_locus_tag=VYA_19620 NZ_AP024165.1 Protein Homology CDS 2260888 2262021 . - 0 ID=cds-WP_128810423.1-2;Parent=gene-VA249_RS10375;Dbxref=Genbank:WP_128810423.1;Name=WP_128810423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017053294.1;locus_tag=VA249_RS10375;product=flagellin;protein_id=WP_128810423.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2262285 2263418 . - . ID=gene-VA249_RS10380;Name=VA249_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10380;old_locus_tag=VYA_19630 NZ_AP024165.1 Protein Homology CDS 2262285 2263418 . - 0 ID=cds-WP_221067939.1;Parent=gene-VA249_RS10380;Dbxref=Genbank:WP_221067939.1;Name=WP_221067939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005481067.1;locus_tag=VA249_RS10380;product=flagellin;protein_id=WP_221067939.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2263644 2264546 . - . ID=gene-VA249_RS10385;Name=VA249_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10385;old_locus_tag=VYA_19640 NZ_AP024165.1 Protein Homology CDS 2263644 2264546 . - 0 ID=cds-WP_221067940.1;Parent=gene-VA249_RS10385;Dbxref=Genbank:WP_221067940.1;Name=WP_221067940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650106.1;locus_tag=VA249_RS10385;product=Dyp-type peroxidase;protein_id=WP_221067940.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2264591 2265076 . - . ID=gene-VA249_RS10390;Name=VA249_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10390 NZ_AP024165.1 Protein Homology CDS 2264591 2265076 . - 0 ID=cds-WP_128810421.1;Parent=gene-VA249_RS10390;Dbxref=Genbank:WP_128810421.1;Name=WP_128810421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841521.1;locus_tag=VA249_RS10390;product=DUF2919 domain-containing protein;protein_id=WP_128810421.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2265207 2265554 . + . ID=gene-VA249_RS10395;Name=VA249_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10395;old_locus_tag=VYA_19650 NZ_AP024165.1 Protein Homology CDS 2265207 2265554 . + 0 ID=cds-WP_211916173.1;Parent=gene-VA249_RS10395;Dbxref=Genbank:WP_211916173.1;Name=WP_211916173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009703444.1;locus_tag=VA249_RS10395;product=DUF2956 family protein;protein_id=WP_211916173.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2265556 2265888 . + . ID=gene-VA249_RS10400;Name=VA249_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10400;old_locus_tag=VYA_19660 NZ_AP024165.1 Protein Homology CDS 2265556 2265888 . + 0 ID=cds-WP_221067941.1;Parent=gene-VA249_RS10400;Dbxref=Genbank:WP_221067941.1;Name=WP_221067941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195519.1;locus_tag=VA249_RS10400;product=DUF4156 domain-containing protein;protein_id=WP_221067941.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2265979 2266266 . - . ID=gene-VA249_RS10405;Name=VA249_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10405;old_locus_tag=VYA_19670 NZ_AP024165.1 Protein Homology CDS 2265979 2266266 . - 0 ID=cds-WP_128810419.1;Parent=gene-VA249_RS10405;Dbxref=Genbank:WP_128810419.1;Name=WP_128810419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423626.1;locus_tag=VA249_RS10405;product=helix-turn-helix domain-containing protein;protein_id=WP_128810419.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2266561 2266911 . + . ID=gene-VA249_RS10410;Name=VA249_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10410;old_locus_tag=VYA_19680 NZ_AP024165.1 Protein Homology CDS 2266561 2266911 . + 0 ID=cds-WP_221067942.1;Parent=gene-VA249_RS10410;Dbxref=Genbank:WP_221067942.1;Name=WP_221067942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333617.1;locus_tag=VA249_RS10410;product=ArsC family reductase;protein_id=WP_221067942.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2266930 2268063 . + . ID=gene-VA249_RS10415;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=VA249_RS10415;old_locus_tag=VYA_19690 NZ_AP024165.1 Protein Homology CDS 2266930 2268063 . + 0 ID=cds-WP_221067943.1;Parent=gene-VA249_RS10415;Dbxref=Genbank:WP_221067943.1;Name=WP_221067943.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043877282.1;locus_tag=VA249_RS10415;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_221067943.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2268170 2268868 . + . ID=gene-VA249_RS10420;Name=VA249_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10420;old_locus_tag=VYA_19700 NZ_AP024165.1 Protein Homology CDS 2268170 2268868 . + 0 ID=cds-WP_221067944.1;Parent=gene-VA249_RS10420;Dbxref=Genbank:WP_221067944.1;Name=WP_221067944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436866.1;locus_tag=VA249_RS10420;product=M15 family metallopeptidase;protein_id=WP_221067944.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2268865 2269068 . + . ID=gene-VA249_RS10425;Name=VA249_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10425;old_locus_tag=VYA_19710 NZ_AP024165.1 Protein Homology CDS 2268865 2269068 . + 0 ID=cds-WP_128810415.1;Parent=gene-VA249_RS10425;Dbxref=Genbank:WP_128810415.1;Name=WP_128810415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195515.1;locus_tag=VA249_RS10425;product=DUF2897 family protein;protein_id=WP_128810415.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2269233 2270252 . - . ID=gene-VA249_RS10430;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=VA249_RS10430;old_locus_tag=VYA_19720 NZ_AP024165.1 Protein Homology CDS 2269233 2270252 . - 0 ID=cds-WP_128810414.1;Parent=gene-VA249_RS10430;Dbxref=Genbank:WP_128810414.1;Name=WP_128810414.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189296.1;locus_tag=VA249_RS10430;product=outer membrane protein assembly factor BamC;protein_id=WP_128810414.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2270319 2271197 . - . ID=gene-VA249_RS10435;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=VA249_RS10435;old_locus_tag=VYA_19730 NZ_AP024165.1 Protein Homology CDS 2270319 2271197 . - 0 ID=cds-WP_128810413.1;Parent=gene-VA249_RS10435;Dbxref=Genbank:WP_128810413.1;Name=WP_128810413.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000491214.1;locus_tag=VA249_RS10435;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_128810413.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2271576 2272118 . + . ID=gene-VA249_RS10440;Name=VA249_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10440;old_locus_tag=VYA_19740 NZ_AP024165.1 Protein Homology CDS 2271576 2272118 . + 0 ID=cds-WP_221067945.1;Parent=gene-VA249_RS10440;Dbxref=Genbank:WP_221067945.1;Name=WP_221067945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433038.1;locus_tag=VA249_RS10440;product=glycine cleavage system protein R;protein_id=WP_221067945.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 2272135 2272467 . + . ID=gene-VA249_RS10445;Name=bcp;end_range=2272467,.;gbkey=Gene;gene=bcp;gene_biotype=pseudogene;locus_tag=VA249_RS10445;old_locus_tag=VYA_19750;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 2272135 2272467 . + 0 ID=cds-VA249_RS10445;Parent=gene-VA249_RS10445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016209,GO:0016491;end_range=2272467,.;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005476367.1;locus_tag=VA249_RS10445;partial=true;product=thioredoxin-dependent thiol peroxidase;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 2272559 2273962 . + . ID=gene-VA249_RS10450;Name=VA249_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10450;old_locus_tag=VYA_19760 NZ_AP024165.1 Protein Homology CDS 2272559 2273962 . + 0 ID=cds-WP_176703594.1;Parent=gene-VA249_RS10450;Dbxref=Genbank:WP_176703594.1;Name=WP_176703594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017632496.1;locus_tag=VA249_RS10450;product=site-specific integrase;protein_id=WP_176703594.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2273962 2276283 . + . ID=gene-VA249_RS10455;Name=VA249_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10455;old_locus_tag=VYA_19770 NZ_AP024165.1 Protein Homology CDS 2273962 2276283 . + 0 ID=cds-WP_176703595.1;Parent=gene-VA249_RS10455;Dbxref=Genbank:WP_176703595.1;Name=WP_176703595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005484637.1;locus_tag=VA249_RS10455;product=hypothetical protein;protein_id=WP_176703595.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2276298 2278493 . + . ID=gene-VA249_RS10460;Name=VA249_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10460;old_locus_tag=VYA_19780 NZ_AP024165.1 Protein Homology CDS 2276298 2278493 . + 0 ID=cds-WP_176703596.1;Parent=gene-VA249_RS10460;Dbxref=Genbank:WP_176703596.1;Name=WP_176703596.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817790.1;locus_tag=VA249_RS10460;product=tyrosine-type recombinase/integrase;protein_id=WP_176703596.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2278493 2278990 . + . ID=gene-VA249_RS10465;Name=VA249_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10465;old_locus_tag=VYA_19790 NZ_AP024165.1 Protein Homology CDS 2278493 2278990 . + 0 ID=cds-WP_176703597.1;Parent=gene-VA249_RS10465;Dbxref=Genbank:WP_176703597.1;Name=WP_176703597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005484390.1;locus_tag=VA249_RS10465;product=bacterioferritin comigratory protein;protein_id=WP_176703597.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2279105 2279578 . + . ID=gene-VA249_RS10470;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=VA249_RS10470;old_locus_tag=VYA_19800 NZ_AP024165.1 Protein Homology CDS 2279105 2279578 . + 0 ID=cds-WP_176703599.1;Parent=gene-VA249_RS10470;Dbxref=Genbank:WP_176703599.1;Name=WP_176703599.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189290.1;locus_tag=VA249_RS10470;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_176703599.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2279622 2280182 . - . ID=gene-VA249_RS10475;Name=VA249_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10475;old_locus_tag=VYA_19810 NZ_AP024165.1 GeneMarkS-2+ CDS 2279622 2280182 . - 0 ID=cds-WP_176703601.1;Parent=gene-VA249_RS10475;Dbxref=Genbank:WP_176703601.1;Name=WP_176703601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS10475;product=hypothetical protein;protein_id=WP_176703601.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2280266 2280496 . + . ID=gene-VA249_RS10480;Name=VA249_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10480;old_locus_tag=VYA_19820 NZ_AP024165.1 Protein Homology CDS 2280266 2280496 . + 0 ID=cds-WP_176703603.1;Parent=gene-VA249_RS10480;Dbxref=Genbank:WP_176703603.1;Name=WP_176703603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017038667.1;locus_tag=VA249_RS10480;product=helix-turn-helix domain-containing protein;protein_id=WP_176703603.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2280716 2281111 . - . ID=gene-VA249_RS10485;Name=VA249_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10485;old_locus_tag=VYA_19830 NZ_AP024165.1 GeneMarkS-2+ CDS 2280716 2281111 . - 0 ID=cds-WP_176703605.1;Parent=gene-VA249_RS10485;Dbxref=Genbank:WP_176703605.1;Name=WP_176703605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS10485;product=hypothetical protein;protein_id=WP_176703605.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2281488 2281859 . - . ID=gene-VA249_RS10490;Name=VA249_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10490;old_locus_tag=VYA_19840 NZ_AP024165.1 GeneMarkS-2+ CDS 2281488 2281859 . - 0 ID=cds-WP_176703606.1;Parent=gene-VA249_RS10490;Dbxref=Genbank:WP_176703606.1;Name=WP_176703606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS10490;product=hypothetical protein;protein_id=WP_176703606.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 2281985 2282167 . - . ID=gene-VA249_RS24110;Name=VA249_RS24110;end_range=2282167,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24110;old_locus_tag=VYA_19850;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 2281985 2282167 . - 0 ID=cds-VA249_RS24110;Parent=gene-VA249_RS24110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2282167,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011494503.1;locus_tag=VA249_RS24110;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 2282192 2282428 . - . ID=gene-VA249_RS10495;Name=VA249_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10495;old_locus_tag=VYA_19860 NZ_AP024165.1 GeneMarkS-2+ CDS 2282192 2282428 . - 0 ID=cds-WP_176703608.1;Parent=gene-VA249_RS10495;Dbxref=Genbank:WP_176703608.1;Name=WP_176703608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS10495;product=hypothetical protein;protein_id=WP_176703608.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 2282664 2282879 . + . ID=gene-VA249_RS10500;Name=VA249_RS10500;end_range=2282879,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS10500;old_locus_tag=VYA_19870;partial=true;pseudo=true NZ_AP024165.1 Protein Homology CDS 2282664 2282879 . + 0 ID=cds-VA249_RS10500;Parent=gene-VA249_RS10500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2282879,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612302.1;locus_tag=VA249_RS10500;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 2283473 2284945 . + . ID=gene-VA249_RS10505;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=VA249_RS10505;old_locus_tag=VYA_19880 NZ_AP024165.1 Protein Homology CDS 2283473 2284945 . + 0 ID=cds-WP_176703910.1;Parent=gene-VA249_RS10505;Dbxref=Genbank:WP_176703910.1;Name=WP_176703910.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019282658.1;locus_tag=VA249_RS10505;product=group II intron reverse transcriptase/maturase;protein_id=WP_176703910.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2285138 2285764 . + . ID=gene-VA249_RS10510;Name=VA249_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10510;old_locus_tag=VYA_19890 NZ_AP024165.1 GeneMarkS-2+ CDS 2285138 2285764 . + 0 ID=cds-WP_176703610.1;Parent=gene-VA249_RS10510;Dbxref=Genbank:WP_176703610.1;Name=WP_176703610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS10510;product=hypothetical protein;protein_id=WP_176703610.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 2286299 2286436 . + . ID=gene-VA249_RS10515;Name=VA249_RS10515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS10515;old_locus_tag=VYA_19910;partial=true;pseudo=true;start_range=.,2286299 NZ_AP024165.1 Protein Homology CDS 2286299 2286436 . + 0 ID=cds-VA249_RS10515;Parent=gene-VA249_RS10515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449666.1;locus_tag=VA249_RS10515;partial=true;product=thioredoxin-dependent thiol peroxidase;pseudo=true;start_range=.,2286299;transl_table=11 NZ_AP024165.1 RefSeq gene 2286503 2287576 . - . ID=gene-VA249_RS10520;Name=VA249_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10520;old_locus_tag=VYA_19920 NZ_AP024165.1 Protein Homology CDS 2286503 2287576 . - 0 ID=cds-WP_128810410.1;Parent=gene-VA249_RS10520;Dbxref=Genbank:WP_128810410.1;Name=WP_128810410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005389843.1;locus_tag=VA249_RS10520;product=AI-2E family transporter;protein_id=WP_128810410.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2287569 2287814 . - . ID=gene-VA249_RS10525;Name=VA249_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10525;old_locus_tag=VYA_19930 NZ_AP024165.1 Protein Homology CDS 2287569 2287814 . - 0 ID=cds-WP_211916542.1;Parent=gene-VA249_RS10525;Dbxref=Genbank:WP_211916542.1;Name=WP_211916542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189245.1;locus_tag=VA249_RS10525;product=sulfurtransferase TusA family protein;protein_id=WP_211916542.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2288092 2289543 . + . ID=gene-VA249_RS10530;Name=VA249_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10530;old_locus_tag=VYA_19940 NZ_AP024165.1 Protein Homology CDS 2288092 2289543 . + 0 ID=cds-WP_221069936.1;Parent=gene-VA249_RS10530;Dbxref=Genbank:WP_221069936.1;Name=WP_221069936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195514.1;locus_tag=VA249_RS10530;product=M48 family metallopeptidase;protein_id=WP_221069936.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2289560 2289910 . + . ID=gene-VA249_RS10535;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=VA249_RS10535;old_locus_tag=VYA_19950 NZ_AP024165.1 Protein Homology CDS 2289560 2289910 . + 0 ID=cds-WP_221067947.1;Parent=gene-VA249_RS10535;Dbxref=Genbank:WP_221067947.1;Name=WP_221067947.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016799026.1;locus_tag=VA249_RS10535;product=arsenate reductase (glutaredoxin);protein_id=WP_221067947.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2289911 2290483 . + . ID=gene-VA249_RS10540;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=VA249_RS10540;old_locus_tag=VYA_19960 NZ_AP024165.1 Protein Homology CDS 2289911 2290483 . + 0 ID=cds-WP_128810407.1;Parent=gene-VA249_RS10540;Dbxref=Genbank:WP_128810407.1;Name=WP_128810407.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707399.1;locus_tag=VA249_RS10540;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_128810407.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2290543 2290998 . + . ID=gene-VA249_RS10545;Name=VA249_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10545;old_locus_tag=VYA_19970 NZ_AP024165.1 Protein Homology CDS 2290543 2290998 . + 0 ID=cds-WP_221067948.1;Parent=gene-VA249_RS10545;Dbxref=Genbank:WP_221067948.1;Name=WP_221067948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650080.1;locus_tag=VA249_RS10545;product=DUF2069 domain-containing protein;protein_id=WP_221067948.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2291291 2292658 . - . ID=gene-VA249_RS10550;Name=VA249_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10550;old_locus_tag=VYA_19980 NZ_AP024165.1 Protein Homology CDS 2291291 2292658 . - 0 ID=cds-WP_221067949.1;Parent=gene-VA249_RS10550;Dbxref=Genbank:WP_221067949.1;Name=WP_221067949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533968.1;locus_tag=VA249_RS10550;product=DUF2066 domain-containing protein;protein_id=WP_221067949.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2292894 2294147 . + . ID=gene-VA249_RS10555;Name=VA249_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10555;old_locus_tag=VYA_19990 NZ_AP024165.1 Protein Homology CDS 2292894 2294147 . + 0 ID=cds-WP_128810404.1;Parent=gene-VA249_RS10555;Dbxref=Genbank:WP_128810404.1;Name=WP_128810404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433047.1;locus_tag=VA249_RS10555;product=uracil-xanthine permease family protein;protein_id=WP_128810404.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2294277 2294903 . - . ID=gene-VA249_RS10560;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=VA249_RS10560;old_locus_tag=VYA_20000 NZ_AP024165.1 Protein Homology CDS 2294277 2294903 . - 0 ID=cds-WP_005445324.1;Parent=gene-VA249_RS10560;Dbxref=Genbank:WP_005445324.1;Name=WP_005445324.1;Ontology_term=GO:0008655,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005457783.1;locus_tag=VA249_RS10560;product=uracil phosphoribosyltransferase;protein_id=WP_005445324.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2295082 2296122 . + . ID=gene-VA249_RS10565;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=VA249_RS10565;old_locus_tag=VYA_20010 NZ_AP024165.1 Protein Homology CDS 2295082 2296122 . + 0 ID=cds-WP_211916159.1;Parent=gene-VA249_RS10565;Dbxref=Genbank:WP_211916159.1;Name=WP_211916159.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008222945.1;locus_tag=VA249_RS10565;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_211916159.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2296287 2296925 . + . ID=gene-VA249_RS10570;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=VA249_RS10570;old_locus_tag=VYA_20020 NZ_AP024165.1 Protein Homology CDS 2296287 2296925 . + 0 ID=cds-WP_221067950.1;Parent=gene-VA249_RS10570;Dbxref=Genbank:WP_221067950.1;Name=WP_221067950.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698624.1;locus_tag=VA249_RS10570;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_221067950.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2297320 2298165 . - . ID=gene-VA249_RS10575;Name=VA249_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10575;old_locus_tag=VYA_20040 NZ_AP024165.1 Protein Homology CDS 2297320 2298165 . - 0 ID=cds-WP_221067951.1;Parent=gene-VA249_RS10575;Dbxref=Genbank:WP_221067951.1;Name=WP_221067951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004744816.1;locus_tag=VA249_RS10575;product=class II glutamine amidotransferase;protein_id=WP_221067951.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2298226 2298801 . - . ID=gene-VA249_RS10580;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=VA249_RS10580;old_locus_tag=VYA_20050 NZ_AP024165.1 Protein Homology CDS 2298226 2298801 . - 0 ID=cds-WP_128810400.1;Parent=gene-VA249_RS10580;Dbxref=Genbank:WP_128810400.1;Name=WP_128810400.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079797.1;locus_tag=VA249_RS10580;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_128810400.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2299159 2301603 . + . ID=gene-VA249_RS10585;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=VA249_RS10585;old_locus_tag=VYA_20060 NZ_AP024165.1 Protein Homology CDS 2299159 2301603 . + 0 ID=cds-WP_221067952.1;Parent=gene-VA249_RS10585;Dbxref=Genbank:WP_221067952.1;Name=WP_221067952.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195509.1;locus_tag=VA249_RS10585;product=acyl-CoA dehydrogenase FadE;protein_id=WP_221067952.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2301709 2301972 . - . ID=gene-VA249_RS10590;Name=VA249_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10590;old_locus_tag=VYA_20070 NZ_AP024165.1 Protein Homology CDS 2301709 2301972 . - 0 ID=cds-WP_221067953.1;Parent=gene-VA249_RS10590;Dbxref=Genbank:WP_221067953.1;Name=WP_221067953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017057643.1;locus_tag=VA249_RS10590;product=DNA polymerase III subunit epsilon;protein_id=WP_221067953.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2302310 2303560 . - . ID=gene-VA249_RS10595;Name=VA249_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10595;old_locus_tag=VYA_20080 NZ_AP024165.1 Protein Homology CDS 2302310 2303560 . - 0 ID=cds-WP_221067954.1;Parent=gene-VA249_RS10595;Dbxref=Genbank:WP_221067954.1;Name=WP_221067954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533943.1;locus_tag=VA249_RS10595;product=TIGR03503 family protein;protein_id=WP_221067954.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2303569 2304291 . - . ID=gene-VA249_RS10600;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=VA249_RS10600;old_locus_tag=VYA_20090 NZ_AP024165.1 Protein Homology CDS 2303569 2304291 . - 0 ID=cds-WP_128810396.1;Parent=gene-VA249_RS10600;Dbxref=Genbank:WP_128810396.1;Name=WP_128810396.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189236.1;locus_tag=VA249_RS10600;product=DNA polymerase III subunit epsilon;protein_id=WP_128810396.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2304350 2304814 . + . ID=gene-VA249_RS10605;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=VA249_RS10605;old_locus_tag=VYA_20100 NZ_AP024165.1 Protein Homology CDS 2304350 2304814 . + 0 ID=cds-WP_128810395.1;Parent=gene-VA249_RS10605;Dbxref=Genbank:WP_128810395.1;Name=WP_128810395.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006957886.1;locus_tag=VA249_RS10605;product=ribonuclease HI;protein_id=WP_128810395.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2304878 2305639 . - . ID=gene-VA249_RS10610;Name=VA249_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10610;old_locus_tag=VYA_20110 NZ_AP024165.1 Protein Homology CDS 2304878 2305639 . - 0 ID=cds-WP_211916153.1;Parent=gene-VA249_RS10610;Dbxref=Genbank:WP_211916153.1;Name=WP_211916153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008077543.1;locus_tag=VA249_RS10610;product=methyltransferase domain-containing protein;protein_id=WP_211916153.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2305675 2306433 . + . ID=gene-VA249_RS10615;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=VA249_RS10615;old_locus_tag=VYA_20120 NZ_AP024165.1 Protein Homology CDS 2305675 2306433 . + 0 ID=cds-WP_221067955.1;Parent=gene-VA249_RS10615;Dbxref=Genbank:WP_221067955.1;Name=WP_221067955.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079785.1;locus_tag=VA249_RS10615;product=hydroxyacylglutathione hydrolase;protein_id=WP_221067955.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2306680 2308266 . + . ID=gene-VA249_RS10620;Name=VA249_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10620;old_locus_tag=VYA_20130 NZ_AP024165.1 Protein Homology CDS 2306680 2308266 . + 0 ID=cds-WP_221067956.1;Parent=gene-VA249_RS10620;Dbxref=Genbank:WP_221067956.1;Name=WP_221067956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650052.1;locus_tag=VA249_RS10620;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_221067956.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2308263 2308949 . + . ID=gene-VA249_RS10625;Name=VA249_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10625;old_locus_tag=VYA_20140 NZ_AP024165.1 Protein Homology CDS 2308263 2308949 . + 0 ID=cds-WP_221067957.1;Parent=gene-VA249_RS10625;Dbxref=Genbank:WP_221067957.1;Name=WP_221067957.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430220.1;locus_tag=VA249_RS10625;product=YIP1 family protein;protein_id=WP_221067957.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2308977 2309822 . - . ID=gene-VA249_RS10630;Name=VA249_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10630;old_locus_tag=VYA_20150 NZ_AP024165.1 Protein Homology CDS 2308977 2309822 . - 0 ID=cds-WP_221067958.1;Parent=gene-VA249_RS10630;Dbxref=Genbank:WP_221067958.1;Name=WP_221067958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494288.1;locus_tag=VA249_RS10630;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_221067958.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2309952 2310290 . - . ID=gene-VA249_RS10635;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=VA249_RS10635;old_locus_tag=VYA_20160 NZ_AP024165.1 Protein Homology CDS 2309952 2310290 . - 0 ID=cds-WP_164837151.1;Parent=gene-VA249_RS10635;Dbxref=Genbank:WP_164837151.1;Name=WP_164837151.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228249.1;locus_tag=VA249_RS10635;product=nitrogen regulatory protein P-II;protein_id=WP_164837151.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2310404 2310718 . - . ID=gene-VA249_RS10640;Name=VA249_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10640;old_locus_tag=VYA_20170 NZ_AP024165.1 Protein Homology CDS 2310404 2310718 . - 0 ID=cds-WP_221067959.1;Parent=gene-VA249_RS10640;Dbxref=Genbank:WP_221067959.1;Name=WP_221067959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017060729.1;locus_tag=VA249_RS10640;product=cytochrome c;protein_id=WP_221067959.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2310779 2312113 . - . ID=gene-VA249_RS10645;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=VA249_RS10645;old_locus_tag=VYA_20180 NZ_AP024165.1 Protein Homology CDS 2310779 2312113 . - 0 ID=cds-WP_221067960.1;Parent=gene-VA249_RS10645;Dbxref=Genbank:WP_221067960.1;Name=WP_221067960.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436808.1;locus_tag=VA249_RS10645;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_221067960.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2312233 2313192 . - . ID=gene-VA249_RS10650;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=VA249_RS10650;old_locus_tag=VYA_20190 NZ_AP024165.1 Protein Homology CDS 2312233 2313192 . - 0 ID=cds-WP_221067961.1;Parent=gene-VA249_RS10650;Dbxref=Genbank:WP_221067961.1;Name=WP_221067961.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335136.1;locus_tag=VA249_RS10650;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_221067961.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2313239 2316718 . - . ID=gene-VA249_RS10655;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=VA249_RS10655;old_locus_tag=VYA_20200 NZ_AP024165.1 Protein Homology CDS 2313239 2316718 . - 0 ID=cds-WP_221067962.1;Parent=gene-VA249_RS10655;Dbxref=Genbank:WP_221067962.1;Name=WP_221067962.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017053970.1;locus_tag=VA249_RS10655;product=DNA polymerase III subunit alpha;protein_id=WP_221067962.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2316813 2317451 . - . ID=gene-VA249_RS10660;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=VA249_RS10660;old_locus_tag=VYA_20210 NZ_AP024165.1 Protein Homology CDS 2316813 2317451 . - 0 ID=cds-WP_221067963.1;Parent=gene-VA249_RS10660;Dbxref=Genbank:WP_221067963.1;Name=WP_221067963.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650039.1;locus_tag=VA249_RS10660;product=ribonuclease HII;protein_id=WP_221067963.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2317461 2318600 . - . ID=gene-VA249_RS10665;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=VA249_RS10665;old_locus_tag=VYA_20220 NZ_AP024165.1 Protein Homology CDS 2317461 2318600 . - 0 ID=cds-WP_221067964.1;Parent=gene-VA249_RS10665;Dbxref=Genbank:WP_221067964.1;Name=WP_221067964.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128689.1;locus_tag=VA249_RS10665;product=lipid-A-disaccharide synthase;protein_id=WP_221067964.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2318826 2319614 . - . ID=gene-VA249_RS10670;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=VA249_RS10670;old_locus_tag=VYA_20230 NZ_AP024165.1 Protein Homology CDS 2318826 2319614 . - 0 ID=cds-WP_221067965.1;Parent=gene-VA249_RS10670;Dbxref=Genbank:WP_221067965.1;Name=WP_221067965.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016787750.1;locus_tag=VA249_RS10670;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_221067965.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2319616 2320068 . - . ID=gene-VA249_RS10675;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=VA249_RS10675;old_locus_tag=VYA_20240 NZ_AP024165.1 Protein Homology CDS 2319616 2320068 . - 0 ID=cds-WP_009707417.1;Parent=gene-VA249_RS10675;Dbxref=Genbank:WP_009707417.1;Name=WP_009707417.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847408.1;locus_tag=VA249_RS10675;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_009707417.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2320226 2321257 . - . ID=gene-VA249_RS10680;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=VA249_RS10680;old_locus_tag=VYA_20250 NZ_AP024165.1 Protein Homology CDS 2320226 2321257 . - 0 ID=cds-WP_128810382.1;Parent=gene-VA249_RS10680;Dbxref=Genbank:WP_128810382.1;Name=WP_128810382.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436787.1;locus_tag=VA249_RS10680;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_128810382.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2321264 2321773 . - . ID=gene-VA249_RS10685;Name=VA249_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10685;old_locus_tag=VYA_20260 NZ_AP024165.1 Protein Homology CDS 2321264 2321773 . - 0 ID=cds-WP_164837150.1;Parent=gene-VA249_RS10685;Dbxref=Genbank:WP_164837150.1;Name=WP_164837150.1;Ontology_term=GO:0051082;gbkey=CDS;go_function=unfolded protein binding|0051082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232756.1;locus_tag=VA249_RS10685;product=OmpH family outer membrane protein;protein_id=WP_164837150.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2321787 2324198 . - . ID=gene-VA249_RS10690;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=VA249_RS10690;old_locus_tag=VYA_20270 NZ_AP024165.1 Protein Homology CDS 2321787 2324198 . - 0 ID=cds-WP_128810381.1;Parent=gene-VA249_RS10690;Dbxref=Genbank:WP_128810381.1;Name=WP_128810381.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529356.1;locus_tag=VA249_RS10690;product=outer membrane protein assembly factor BamA;protein_id=WP_128810381.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2324243 2325601 . - . ID=gene-VA249_RS10695;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=VA249_RS10695;old_locus_tag=VYA_20280 NZ_AP024165.1 Protein Homology CDS 2324243 2325601 . - 0 ID=cds-WP_221067966.1;Parent=gene-VA249_RS10695;Dbxref=Genbank:WP_221067966.1;Name=WP_221067966.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004738593.1;locus_tag=VA249_RS10695;product=sigma E protease regulator RseP;protein_id=WP_221067966.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2325601 2326806 . - . ID=gene-VA249_RS10700;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=VA249_RS10700;old_locus_tag=VYA_20290 NZ_AP024165.1 Protein Homology CDS 2325601 2326806 . - 0 ID=cds-WP_221067967.1;Parent=gene-VA249_RS10700;Dbxref=Genbank:WP_221067967.1;Name=WP_221067967.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128694.1;locus_tag=VA249_RS10700;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_221067967.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2326858 2327700 . - . ID=gene-VA249_RS10705;Name=VA249_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10705;old_locus_tag=VYA_20300 NZ_AP024165.1 Protein Homology CDS 2326858 2327700 . - 0 ID=cds-WP_221067968.1;Parent=gene-VA249_RS10705;Dbxref=Genbank:WP_221067968.1;Name=WP_221067968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017066401.1;locus_tag=VA249_RS10705;product=phosphatidate cytidylyltransferase;protein_id=WP_221067968.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2327713 2328468 . - . ID=gene-VA249_RS10710;Name=VA249_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10710;old_locus_tag=VYA_20310 NZ_AP024165.1 Protein Homology CDS 2327713 2328468 . - 0 ID=cds-WP_211916139.1;Parent=gene-VA249_RS10710;Dbxref=Genbank:WP_211916139.1;Name=WP_211916139.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842462.1;locus_tag=VA249_RS10710;product=isoprenyl transferase;protein_id=WP_211916139.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2328564 2329121 . - . ID=gene-VA249_RS10715;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=VA249_RS10715;old_locus_tag=VYA_20320 NZ_AP024165.1 Protein Homology CDS 2328564 2329121 . - 0 ID=cds-WP_010449748.1;Parent=gene-VA249_RS10715;Dbxref=Genbank:WP_010449748.1;Name=WP_010449748.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011262432.1;locus_tag=VA249_RS10715;product=ribosome recycling factor;protein_id=WP_010449748.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2329217 2329948 . - . ID=gene-VA249_RS10720;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=VA249_RS10720;old_locus_tag=VYA_20330 NZ_AP024165.1 Protein Homology CDS 2329217 2329948 . - 0 ID=cds-WP_010449750.1;Parent=gene-VA249_RS10720;Dbxref=Genbank:WP_010449750.1;Name=WP_010449750.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446177.1;locus_tag=VA249_RS10720;product=UMP kinase;protein_id=WP_010449750.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2330154 2330999 . - . ID=gene-VA249_RS10725;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=VA249_RS10725;old_locus_tag=VYA_20340 NZ_AP024165.1 Protein Homology CDS 2330154 2330999 . - 0 ID=cds-WP_128810377.1;Parent=gene-VA249_RS10725;Dbxref=Genbank:WP_128810377.1;Name=WP_128810377.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005593374.1;locus_tag=VA249_RS10725;product=translation elongation factor Ts;protein_id=WP_128810377.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2331131 2331859 . - . ID=gene-VA249_RS10730;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=VA249_RS10730;old_locus_tag=VYA_20350 NZ_AP024165.1 Protein Homology CDS 2331131 2331859 . - 0 ID=cds-WP_128810376.1;Parent=gene-VA249_RS10730;Dbxref=Genbank:WP_128810376.1;Name=WP_128810376.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842458.1;locus_tag=VA249_RS10730;product=30S ribosomal protein S2;protein_id=WP_128810376.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2332258 2333136 . + . ID=gene-VA249_RS10735;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=VA249_RS10735;old_locus_tag=VYA_20360 NZ_AP024165.1 Protein Homology CDS 2332258 2333136 . + 0 ID=cds-WP_221067969.1;Parent=gene-VA249_RS10735;Dbxref=Genbank:WP_221067969.1;Name=WP_221067969.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189229.1;locus_tag=VA249_RS10735;product=type I methionyl aminopeptidase;protein_id=WP_221067969.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2333237 2335861 . + . ID=gene-VA249_RS10740;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=VA249_RS10740;old_locus_tag=VYA_20370 NZ_AP024165.1 Protein Homology CDS 2333237 2335861 . + 0 ID=cds-WP_221067970.1;Parent=gene-VA249_RS10740;Dbxref=Genbank:WP_221067970.1;Name=WP_221067970.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195492.1;locus_tag=VA249_RS10740;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_221067970.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2336021 2336404 . + . ID=gene-VA249_RS10745;Name=VA249_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10745;old_locus_tag=VYA_20380 NZ_AP024165.1 Protein Homology CDS 2336021 2336404 . + 0 ID=cds-WP_128810373.1;Parent=gene-VA249_RS10745;Dbxref=Genbank:WP_128810373.1;Name=WP_128810373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842455.1;locus_tag=VA249_RS10745;product=DUF3461 family protein;protein_id=WP_128810373.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2336500 2337267 . - . ID=gene-VA249_RS10750;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=VA249_RS10750;old_locus_tag=VYA_20390 NZ_AP024165.1 Protein Homology CDS 2336500 2337267 . - 0 ID=cds-WP_221067971.1;Parent=gene-VA249_RS10750;Dbxref=Genbank:WP_221067971.1;Name=WP_221067971.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529369.1;locus_tag=VA249_RS10750;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_221067971.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2337273 2337587 . - . ID=gene-VA249_RS10755;Name=VA249_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10755;old_locus_tag=VYA_20400 NZ_AP024165.1 Protein Homology CDS 2337273 2337587 . - 0 ID=cds-WP_211916135.1;Parent=gene-VA249_RS10755;Dbxref=Genbank:WP_211916135.1;Name=WP_211916135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436756.1;locus_tag=VA249_RS10755;product=YqcC family protein;protein_id=WP_211916135.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2337664 2338701 . + . ID=gene-VA249_RS10760;Name=VA249_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10760;old_locus_tag=VYA_20410 NZ_AP024165.1 Protein Homology CDS 2337664 2338701 . + 0 ID=cds-WP_221067972.1;Parent=gene-VA249_RS10760;Dbxref=Genbank:WP_221067972.1;Name=WP_221067972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446188.1;locus_tag=VA249_RS10760;product=DUF3549 family protein;protein_id=WP_221067972.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2338715 2339014 . + . ID=gene-VA249_RS10765;Name=VA249_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10765 NZ_AP024165.1 Protein Homology CDS 2338715 2339014 . + 0 ID=cds-WP_211916133.1;Parent=gene-VA249_RS10765;Dbxref=Genbank:WP_211916133.1;Name=WP_211916133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707427.1;locus_tag=VA249_RS10765;product=DUF3301 domain-containing protein;protein_id=WP_211916133.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2338974 2339459 . - . ID=gene-VA249_RS10770;Name=VA249_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10770;old_locus_tag=VYA_20420 NZ_AP024165.1 Protein Homology CDS 2338974 2339459 . - 0 ID=cds-WP_164837242.1;Parent=gene-VA249_RS10770;Dbxref=Genbank:WP_164837242.1;Name=WP_164837242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449778.1;locus_tag=VA249_RS10770;product=GNAT family N-acetyltransferase;protein_id=WP_164837242.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2340357 2340650 . + . ID=gene-VA249_RS10775;Name=VA249_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10775;old_locus_tag=VYA_20430 NZ_AP024165.1 Protein Homology CDS 2340357 2340650 . + 0 ID=cds-WP_221067973.1;Parent=gene-VA249_RS10775;Dbxref=Genbank:WP_221067973.1;Name=WP_221067973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817748.1;locus_tag=VA249_RS10775;product=hypothetical protein;protein_id=WP_221067973.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2340647 2341090 . + . ID=gene-VA249_RS10780;Name=VA249_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10780;old_locus_tag=VYA_20440 NZ_AP024165.1 Protein Homology CDS 2340647 2341090 . + 0 ID=cds-WP_221067974.1;Parent=gene-VA249_RS10780;Dbxref=Genbank:WP_221067974.1;Name=WP_221067974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150968.1;locus_tag=VA249_RS10780;product=YaiI/YqxD family protein;protein_id=WP_221067974.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2341163 2342749 . - . ID=gene-VA249_RS10785;Name=VA249_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10785;old_locus_tag=VYA_20450 NZ_AP024165.1 Protein Homology CDS 2341163 2342749 . - 0 ID=cds-WP_221067975.1;Parent=gene-VA249_RS10785;Dbxref=Genbank:WP_221067975.1;Name=WP_221067975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817743.1;locus_tag=VA249_RS10785;product=AbgT family transporter;protein_id=WP_221067975.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2343110 2343805 . + . ID=gene-VA249_RS10790;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=VA249_RS10790;old_locus_tag=VYA_20460 NZ_AP024165.1 Protein Homology CDS 2343110 2343805 . + 0 ID=cds-WP_221067976.1;Parent=gene-VA249_RS10790;Dbxref=Genbank:WP_221067976.1;Name=WP_221067976.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447760.1;locus_tag=VA249_RS10790;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_221067976.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2343916 2345631 . + . ID=gene-VA249_RS10795;Name=VA249_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10795;old_locus_tag=VYA_20470 NZ_AP024165.1 Protein Homology CDS 2343916 2345631 . + 0 ID=cds-WP_128810364.1;Parent=gene-VA249_RS10795;Dbxref=Genbank:WP_128810364.1;Name=WP_128810364.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707434.1;locus_tag=VA249_RS10795;product=proline--tRNA ligase;protein_id=WP_128810364.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2345795 2346463 . + . ID=gene-VA249_RS10800;Name=VA249_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10800;old_locus_tag=VYA_20480 NZ_AP024165.1 Protein Homology CDS 2345795 2346463 . + 0 ID=cds-WP_221067977.1;Parent=gene-VA249_RS10800;Dbxref=Genbank:WP_221067977.1;Name=WP_221067977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449798.1;locus_tag=VA249_RS10800;product=DUF533 domain-containing protein;protein_id=WP_221067977.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2346575 2346778 . + . ID=gene-VA249_RS10805;Name=VA249_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10805;old_locus_tag=VYA_20490 NZ_AP024165.1 Protein Homology CDS 2346575 2346778 . + 0 ID=cds-WP_221067978.1;Parent=gene-VA249_RS10805;Dbxref=Genbank:WP_221067978.1;Name=WP_221067978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847436.1;locus_tag=VA249_RS10805;product=YaeP family protein;protein_id=WP_221067978.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2346781 2346972 . + . ID=gene-VA249_RS10810;Name=VA249_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10810;old_locus_tag=VYA_20500 NZ_AP024165.1 Protein Homology CDS 2346781 2346972 . + 0 ID=cds-WP_128810361.1;Parent=gene-VA249_RS10810;Dbxref=Genbank:WP_128810361.1;Name=WP_128810361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046697.1;locus_tag=VA249_RS10810;product=DUF4250 domain-containing protein;protein_id=WP_128810361.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2347100 2348464 . - . ID=gene-VA249_RS10815;Name=VA249_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10815;old_locus_tag=VYA_20510 NZ_AP024165.1 Protein Homology CDS 2347100 2348464 . - 0 ID=cds-WP_221067979.1;Parent=gene-VA249_RS10815;Dbxref=Genbank:WP_221067979.1;Name=WP_221067979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232781.1;locus_tag=VA249_RS10815;product=sodium-dependent transporter;protein_id=WP_221067979.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2348677 2349420 . - . ID=gene-VA249_RS10820;Name=VA249_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10820;old_locus_tag=VYA_20520 NZ_AP024165.1 Protein Homology CDS 2348677 2349420 . - 0 ID=cds-WP_221067980.1;Parent=gene-VA249_RS10820;Dbxref=Genbank:WP_221067980.1;Name=WP_221067980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529384.1;locus_tag=VA249_RS10820;product=DUF2884 family protein;protein_id=WP_221067980.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2349480 2349959 . - . ID=gene-VA249_RS10825;Name=VA249_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10825;old_locus_tag=VYA_20530 NZ_AP024165.1 Protein Homology CDS 2349480 2349959 . - 0 ID=cds-WP_221067981.1;Parent=gene-VA249_RS10825;Dbxref=Genbank:WP_221067981.1;Name=WP_221067981.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005456579.1;locus_tag=VA249_RS10825;product=GreA/GreB family elongation factor;protein_id=WP_221067981.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2350036 2351961 . + . ID=gene-VA249_RS10830;Name=VA249_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10830;old_locus_tag=VYA_20540 NZ_AP024165.1 Protein Homology CDS 2350036 2351961 . + 0 ID=cds-WP_221067982.1;Parent=gene-VA249_RS10830;Dbxref=Genbank:WP_221067982.1;Name=WP_221067982.1;Ontology_term=GO:0006310,GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195480.1;locus_tag=VA249_RS10830;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_221067982.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2351975 2353003 . - . ID=gene-VA249_RS10835;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=VA249_RS10835;old_locus_tag=VYA_20550 NZ_AP024165.1 Protein Homology CDS 2351975 2353003 . - 0 ID=cds-WP_242598069.1;Parent=gene-VA249_RS10835;Dbxref=Genbank:WP_242598069.1;Name=WP_242598069.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707440.1;locus_tag=VA249_RS10835;product=DNA polymerase IV;protein_id=WP_242598069.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2353384 2354310 . - . ID=gene-VA249_RS10840;Name=VA249_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10840;old_locus_tag=VYA_20560 NZ_AP024165.1 Protein Homology CDS 2353384 2354310 . - 0 ID=cds-WP_225927091.1;Parent=gene-VA249_RS10840;Dbxref=Genbank:WP_225927091.1;Name=WP_225927091.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712028.1;locus_tag=VA249_RS10840;product=methyl-accepting chemotaxis protein;protein_id=WP_225927091.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2355080 2356294 . + . ID=gene-VA249_RS10845;Name=VA249_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10845;old_locus_tag=VYA_20570 NZ_AP024165.1 Protein Homology CDS 2355080 2356294 . + 0 ID=cds-WP_221067985.1;Parent=gene-VA249_RS10845;Dbxref=Genbank:WP_221067985.1;Name=WP_221067985.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450957.1;locus_tag=VA249_RS10845;product=diguanylate cyclase;protein_id=WP_221067985.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2356368 2356601 . - . ID=gene-VA249_RS10850;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=VA249_RS10850;old_locus_tag=VYA_20580 NZ_AP024165.1 Protein Homology CDS 2356368 2356601 . - 0 ID=cds-WP_005436655.1;Parent=gene-VA249_RS10850;Dbxref=Genbank:WP_005436655.1;Name=WP_005436655.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013856179.1;locus_tag=VA249_RS10850;product=(Na+)-NQR maturation NqrM;protein_id=WP_005436655.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2356624 2357628 . - . ID=gene-VA249_RS10855;Name=VA249_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10855;old_locus_tag=VYA_20590 NZ_AP024165.1 Protein Homology CDS 2356624 2357628 . - 0 ID=cds-WP_221067986.1;Parent=gene-VA249_RS10855;Dbxref=Genbank:WP_221067986.1;Name=WP_221067986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817737.1;locus_tag=VA249_RS10855;product=FAD:protein FMN transferase;protein_id=WP_221067986.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2357817 2359040 . - . ID=gene-VA249_RS10860;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=VA249_RS10860;old_locus_tag=VYA_20600 NZ_AP024165.1 Protein Homology CDS 2357817 2359040 . - 0 ID=cds-WP_221067987.1;Parent=gene-VA249_RS10860;Dbxref=Genbank:WP_221067987.1;Name=WP_221067987.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232789.1;locus_tag=VA249_RS10860;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_221067987.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2359074 2359670 . - . ID=gene-VA249_RS10865;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=VA249_RS10865;old_locus_tag=VYA_20610 NZ_AP024165.1 Protein Homology CDS 2359074 2359670 . - 0 ID=cds-WP_005436652.1;Parent=gene-VA249_RS10865;Dbxref=Genbank:WP_005436652.1;Name=WP_005436652.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529392.1;locus_tag=VA249_RS10865;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_005436652.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2359678 2360310 . - . ID=gene-VA249_RS10870;Name=VA249_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10870;old_locus_tag=VYA_20620 NZ_AP024165.1 Protein Homology CDS 2359678 2360310 . - 0 ID=cds-WP_005436651.1;Parent=gene-VA249_RS10870;Dbxref=Genbank:WP_005436651.1;Name=WP_005436651.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017044028.1;locus_tag=VA249_RS10870;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_005436651.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2360310 2361095 . - . ID=gene-VA249_RS10875;Name=VA249_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10875;old_locus_tag=VYA_20630 NZ_AP024165.1 Protein Homology CDS 2360310 2361095 . - 0 ID=cds-WP_221067988.1;Parent=gene-VA249_RS10875;Dbxref=Genbank:WP_221067988.1;Name=WP_221067988.1;Ontology_term=GO:0006814,GO:0016655,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005456526.1;locus_tag=VA249_RS10875;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_221067988.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2361085 2362326 . - . ID=gene-VA249_RS10880;Name=VA249_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10880;old_locus_tag=VYA_20640 NZ_AP024165.1 Protein Homology CDS 2361085 2362326 . - 0 ID=cds-WP_128810350.1;Parent=gene-VA249_RS10880;Dbxref=Genbank:WP_128810350.1;Name=WP_128810350.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128722.1;locus_tag=VA249_RS10880;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_128810350.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2362330 2363670 . - . ID=gene-VA249_RS10885;Name=VA249_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10885;old_locus_tag=VYA_20650 NZ_AP024165.1 Protein Homology CDS 2362330 2363670 . - 0 ID=cds-WP_128810349.1;Parent=gene-VA249_RS10885;Dbxref=Genbank:WP_128810349.1;Name=WP_128810349.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017079930.1;locus_tag=VA249_RS10885;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_128810349.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2364131 2364439 . - . ID=gene-VA249_RS10890;Name=VA249_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10890;old_locus_tag=VYA_20660 NZ_AP024165.1 Protein Homology CDS 2364131 2364439 . - 0 ID=cds-WP_221067989.1;Parent=gene-VA249_RS10890;Dbxref=Genbank:WP_221067989.1;Name=WP_221067989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016795194.1;locus_tag=VA249_RS10890;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=WP_221067989.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2364644 2365801 . + . ID=gene-VA249_RS10895;Name=VA249_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10895;old_locus_tag=VYA_20670 NZ_AP024165.1 Protein Homology CDS 2364644 2365801 . + 0 ID=cds-WP_221067990.1;Parent=gene-VA249_RS10895;Dbxref=Genbank:WP_221067990.1;Name=WP_221067990.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820772.1;locus_tag=VA249_RS10895;product=methyltransferase;protein_id=WP_221067990.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2365916 2366485 . + . ID=gene-VA249_RS10900;Name=VA249_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10900;old_locus_tag=VYA_20680 NZ_AP024165.1 Protein Homology CDS 2365916 2366485 . + 0 ID=cds-WP_128810346.1;Parent=gene-VA249_RS10900;Dbxref=Genbank:WP_128810346.1;Name=WP_128810346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737614.1;locus_tag=VA249_RS10900;product=YajG family lipoprotein;protein_id=WP_128810346.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2366485 2367030 . + . ID=gene-VA249_RS10905;Name=VA249_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10905;old_locus_tag=VYA_20690 NZ_AP024165.1 Protein Homology CDS 2366485 2367030 . + 0 ID=cds-WP_211916113.1;Parent=gene-VA249_RS10905;Dbxref=Genbank:WP_211916113.1;Name=WP_211916113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391752.1;locus_tag=VA249_RS10905;product=peptidylprolyl isomerase;protein_id=WP_211916113.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2367104 2368456 . + . ID=gene-VA249_RS10910;Name=VA249_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10910;old_locus_tag=VYA_20700 NZ_AP024165.1 Protein Homology CDS 2367104 2368456 . + 0 ID=cds-WP_221067991.1;Parent=gene-VA249_RS10910;Dbxref=Genbank:WP_221067991.1;Name=WP_221067991.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649967.1;locus_tag=VA249_RS10910;product=MFS transporter;protein_id=WP_221067991.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2368624 2369286 . - . ID=gene-VA249_RS10915;Name=VA249_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10915;old_locus_tag=VYA_20710 NZ_AP024165.1 Protein Homology CDS 2368624 2369286 . - 0 ID=cds-WP_221067992.1;Parent=gene-VA249_RS10915;Dbxref=Genbank:WP_221067992.1;Name=WP_221067992.1;Ontology_term=GO:0045892;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128729.1;locus_tag=VA249_RS10915;product=ChrR family anti-sigma-E factor;protein_id=WP_221067992.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2369283 2369864 . - . ID=gene-VA249_RS10920;Name=VA249_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10920;old_locus_tag=VYA_20720 NZ_AP024165.1 Protein Homology CDS 2369283 2369864 . - 0 ID=cds-WP_128810343.1;Parent=gene-VA249_RS10920;Dbxref=Genbank:WP_128810343.1;Name=WP_128810343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494208.1;locus_tag=VA249_RS10920;product=RNA polymerase sigma factor;protein_id=WP_128810343.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2369960 2371336 . - . ID=gene-VA249_RS10925;Name=VA249_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10925;old_locus_tag=VYA_20730 NZ_AP024165.1 Protein Homology CDS 2369960 2371336 . - 0 ID=cds-WP_221067993.1;Parent=gene-VA249_RS10925;Dbxref=Genbank:WP_221067993.1;Name=WP_221067993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436626.1;locus_tag=VA249_RS10925;product=DUF4397 domain-containing protein;protein_id=WP_221067993.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2371333 2371929 . - . ID=gene-VA249_RS10930;Name=VA249_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10930;old_locus_tag=VYA_20740 NZ_AP024165.1 Protein Homology CDS 2371333 2371929 . - 0 ID=cds-WP_128810341.1;Parent=gene-VA249_RS10930;Dbxref=Genbank:WP_128810341.1;Name=WP_128810341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707451.1;locus_tag=VA249_RS10930;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_128810341.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2372253 2373071 . + . ID=gene-VA249_RS10935;Name=VA249_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10935;old_locus_tag=VYA_20750 NZ_AP024165.1 Protein Homology CDS 2372253 2373071 . + 0 ID=cds-WP_221067994.1;Parent=gene-VA249_RS10935;Dbxref=Genbank:WP_221067994.1;Name=WP_221067994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232272.1;locus_tag=VA249_RS10935;product=outer membrane protein OmpK;protein_id=WP_221067994.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2373181 2374071 . + . ID=gene-VA249_RS10940;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=VA249_RS10940;old_locus_tag=VYA_20760 NZ_AP024165.1 Protein Homology CDS 2373181 2374071 . + 0 ID=cds-WP_221067995.1;Parent=gene-VA249_RS10940;Dbxref=Genbank:WP_221067995.1;Name=WP_221067995.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698666.1;locus_tag=VA249_RS10940;product=2-dehydropantoate 2-reductase;protein_id=WP_221067995.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2374068 2374667 . + . ID=gene-VA249_RS10945;Name=VA249_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10945;old_locus_tag=VYA_20770 NZ_AP024165.1 Protein Homology CDS 2374068 2374667 . + 0 ID=cds-WP_211916107.1;Parent=gene-VA249_RS10945;Dbxref=Genbank:WP_211916107.1;Name=WP_211916107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698667.1;locus_tag=VA249_RS10945;product=DJ-1/PfpI family protein;protein_id=WP_211916107.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2374667 2375878 . + . ID=gene-VA249_RS10950;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=VA249_RS10950;old_locus_tag=VYA_20780 NZ_AP024165.1 Protein Homology CDS 2374667 2375878 . + 0 ID=cds-WP_221067996.1;Parent=gene-VA249_RS10950;Dbxref=Genbank:WP_221067996.1;Name=WP_221067996.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdA;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019823861.1;locus_tag=VA249_RS10950;product=cysteine desulfurase CsdA;protein_id=WP_221067996.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2376277 2376705 . - . ID=gene-VA249_RS10955;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=VA249_RS10955;old_locus_tag=VYA_20790 NZ_AP024165.1 Protein Homology CDS 2376277 2376705 . - 0 ID=cds-WP_221067997.1;Parent=gene-VA249_RS10955;Dbxref=Genbank:WP_221067997.1;Name=WP_221067997.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdE;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450927.1;locus_tag=VA249_RS10955;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_221067997.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2376726 2377535 . - . ID=gene-VA249_RS10960;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=VA249_RS10960;old_locus_tag=VYA_20800 NZ_AP024165.1 Protein Homology CDS 2376726 2377535 . - 0 ID=cds-WP_211916104.1;Parent=gene-VA249_RS10960;Dbxref=Genbank:WP_211916104.1;Name=WP_211916104.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005482313.1;locus_tag=VA249_RS10960;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_211916104.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2377637 2378740 . - . ID=gene-VA249_RS10965;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=VA249_RS10965;old_locus_tag=VYA_20810 NZ_AP024165.1 Protein Homology CDS 2377637 2378740 . - 0 ID=cds-WP_221067998.1;Parent=gene-VA249_RS10965;Dbxref=Genbank:WP_221067998.1;Name=WP_221067998.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004413099.1;locus_tag=VA249_RS10965;product=murein transglycosylase A;protein_id=WP_221067998.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2379122 2379565 . - . ID=gene-VA249_RS10970;Name=VA249_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10970;old_locus_tag=VYA_20820 NZ_AP024165.1 Protein Homology CDS 2379122 2379565 . - 0 ID=cds-WP_223917779.1;Parent=gene-VA249_RS10970;Dbxref=Genbank:WP_223917779.1;Name=WP_223917779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128738.1;locus_tag=VA249_RS10970;product=DUF2850 domain-containing protein;protein_id=WP_223917779.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2379728 2381059 . + . ID=gene-VA249_RS10975;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=VA249_RS10975;old_locus_tag=VYA_20830 NZ_AP024165.1 Protein Homology CDS 2379728 2381059 . + 0 ID=cds-WP_221067999.1;Parent=gene-VA249_RS10975;Dbxref=Genbank:WP_221067999.1;Name=WP_221067999.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017110219.1;locus_tag=VA249_RS10975;product=amino-acid N-acetyltransferase;protein_id=WP_221067999.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2381302 2381490 . + . ID=gene-VA249_RS10980;Name=VA249_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS10980;old_locus_tag=VYA_20840 NZ_AP024165.1 Protein Homology CDS 2381302 2381490 . + 0 ID=cds-WP_128810334.1;Parent=gene-VA249_RS10980;Dbxref=Genbank:WP_128810334.1;Name=WP_128810334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707458.1;locus_tag=VA249_RS10980;product=hypothetical protein;protein_id=WP_128810334.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2381525 2383702 . - . ID=gene-VA249_RS10985;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=VA249_RS10985;old_locus_tag=VYA_20850 NZ_AP024165.1 Protein Homology CDS 2381525 2383702 . - 0 ID=cds-WP_221068000.1;Parent=gene-VA249_RS10985;Dbxref=Genbank:WP_221068000.1;Name=WP_221068000.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005482289.1;locus_tag=VA249_RS10985;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_221068000.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2383702 2387340 . - . ID=gene-VA249_RS10990;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=VA249_RS10990;old_locus_tag=VYA_20860 NZ_AP024165.1 Protein Homology CDS 2383702 2387340 . - 0 ID=cds-WP_221068001.1;Parent=gene-VA249_RS10990;Dbxref=Genbank:WP_221068001.1;Name=WP_221068001.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436601.1;locus_tag=VA249_RS10990;product=exodeoxyribonuclease V subunit beta;protein_id=WP_221068001.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2387678 2391151 . - . ID=gene-VA249_RS10995;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=VA249_RS10995;old_locus_tag=VYA_20870 NZ_AP024165.1 Protein Homology CDS 2387678 2391151 . - 0 ID=cds-WP_221068002.1;Parent=gene-VA249_RS10995;Dbxref=Genbank:WP_221068002.1;Name=WP_221068002.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707461.1;locus_tag=VA249_RS10995;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_221068002.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2391395 2392369 . - . ID=gene-VA249_RS11000;Name=VA249_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11000;old_locus_tag=VYA_20880 NZ_AP024165.1 Protein Homology CDS 2391395 2392369 . - 0 ID=cds-WP_221068003.1;Parent=gene-VA249_RS11000;Dbxref=Genbank:WP_221068003.1;Name=WP_221068003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529449.1;locus_tag=VA249_RS11000;product=TDT family transporter;protein_id=WP_221068003.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2392481 2393398 . + . ID=gene-VA249_RS11005;Name=VA249_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11005;old_locus_tag=VYA_20890 NZ_AP024165.1 Protein Homology CDS 2392481 2393398 . + 0 ID=cds-WP_221068004.1;Parent=gene-VA249_RS11005;Dbxref=Genbank:WP_221068004.1;Name=WP_221068004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010449891.1;locus_tag=VA249_RS11005;product=LysR substrate-binding domain-containing protein;protein_id=WP_221068004.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2393546 2393845 . + . ID=gene-VA249_RS11010;Name=VA249_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11010;old_locus_tag=VYA_20900 NZ_AP024165.1 Protein Homology CDS 2393546 2393845 . + 0 ID=cds-WP_128810310.1;Parent=gene-VA249_RS11010;Dbxref=Genbank:WP_128810310.1;Name=WP_128810310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005380208.1;locus_tag=VA249_RS11010;product=YebG family protein;protein_id=WP_128810310.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 2394002 2394076 . + . ID=id-NZ_AP024165.1:2394002..2394076;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 2394209 2394901 . + . ID=gene-VA249_RS11015;Name=VA249_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11015;old_locus_tag=VYA_20910 NZ_AP024165.1 Protein Homology CDS 2394209 2394901 . + 0 ID=cds-WP_005386501.1;Parent=gene-VA249_RS11015;Dbxref=Genbank:WP_005386501.1;Name=WP_005386501.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088209.1;locus_tag=VA249_RS11015;product=iron-sulfur cluster assembly scaffold protein;protein_id=WP_005386501.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2394925 2395908 . + . ID=gene-VA249_RS11020;Name=VA249_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11020;old_locus_tag=VYA_20920 NZ_AP024165.1 Protein Homology CDS 2394925 2395908 . + 0 ID=cds-WP_221068005.1;Parent=gene-VA249_RS11020;Dbxref=Genbank:WP_221068005.1;Name=WP_221068005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817726.1;locus_tag=VA249_RS11020;product=GGGtGRT protein;protein_id=WP_221068005.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2396232 2397263 . + . ID=gene-VA249_RS11025;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=VA249_RS11025;old_locus_tag=VYA_20930 NZ_AP024165.1 Protein Homology CDS 2396232 2397263 . + 0 ID=cds-WP_221068006.1;Parent=gene-VA249_RS11025;Dbxref=Genbank:WP_221068006.1;Name=WP_221068006.1;Ontology_term=GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019274127.1;locus_tag=VA249_RS11025;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_221068006.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2397469 2398605 . - . ID=gene-VA249_RS11030;Name=VA249_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11030;old_locus_tag=VYA_20940 NZ_AP024165.1 Protein Homology CDS 2397469 2398605 . - 0 ID=cds-WP_221068007.1;Parent=gene-VA249_RS11030;Dbxref=Genbank:WP_221068007.1;Name=WP_221068007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008987931.1;locus_tag=VA249_RS11030;product=glycerate kinase;protein_id=WP_221068007.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2398677 2399564 . - . ID=gene-VA249_RS11035;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=VA249_RS11035;old_locus_tag=VYA_20950 NZ_AP024165.1 Protein Homology CDS 2398677 2399564 . - 0 ID=cds-WP_211916093.1;Parent=gene-VA249_RS11035;Dbxref=Genbank:WP_211916093.1;Name=WP_211916093.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017005623.1;locus_tag=VA249_RS11035;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_211916093.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2399598 2400380 . - . ID=gene-VA249_RS11040;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=VA249_RS11040;old_locus_tag=VYA_20960 NZ_AP024165.1 Protein Homology CDS 2399598 2400380 . - 0 ID=cds-WP_221068008.1;Parent=gene-VA249_RS11040;Dbxref=Genbank:WP_221068008.1;Name=WP_221068008.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006233615.1;locus_tag=VA249_RS11040;product=hydroxypyruvate isomerase;protein_id=WP_221068008.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2400448 2402190 . - . ID=gene-VA249_RS11045;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=VA249_RS11045;old_locus_tag=VYA_20970 NZ_AP024165.1 Protein Homology CDS 2400448 2402190 . - 0 ID=cds-WP_221068009.1;Parent=gene-VA249_RS11045;Dbxref=Genbank:WP_221068009.1;Name=WP_221068009.1;Ontology_term=GO:0009436;gbkey=CDS;gene=gcl;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017529323.1;locus_tag=VA249_RS11045;product=glyoxylate carboligase;protein_id=WP_221068009.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2402237 2402722 . - . ID=gene-VA249_RS11050;Name=VA249_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11050;old_locus_tag=VYA_20980 NZ_AP024165.1 Protein Homology CDS 2402237 2402722 . - 0 ID=cds-WP_221068010.1;Parent=gene-VA249_RS11050;Dbxref=Genbank:WP_221068010.1;Name=WP_221068010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016040.2;locus_tag=VA249_RS11050;product=ureidoglycolate lyase;protein_id=WP_221068010.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2402890 2403600 . - . ID=gene-VA249_RS11055;Name=VA249_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11055;old_locus_tag=VYA_20990 NZ_AP024165.1 GeneMarkS-2+ CDS 2402890 2403600 . - 0 ID=cds-WP_221068011.1;Parent=gene-VA249_RS11055;Dbxref=Genbank:WP_221068011.1;Name=WP_221068011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS11055;product=hypothetical protein;protein_id=WP_221068011.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2403626 2405089 . - . ID=gene-VA249_RS11060;Name=VA249_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11060;old_locus_tag=VYA_21000 NZ_AP024165.1 Protein Homology CDS 2403626 2405089 . - 0 ID=cds-WP_221068012.1;Parent=gene-VA249_RS11060;Dbxref=Genbank:WP_221068012.1;Name=WP_221068012.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF008476.0;locus_tag=VA249_RS11060;product=putative allantoin permease;protein_id=WP_221068012.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2405349 2406593 . - . ID=gene-VA249_RS11065;Name=VA249_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11065;old_locus_tag=VYA_21010 NZ_AP024165.1 Protein Homology CDS 2405349 2406593 . - 0 ID=cds-WP_221068013.1;Parent=gene-VA249_RS11065;Dbxref=Genbank:WP_221068013.1;Name=WP_221068013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=VA249_RS11065;product=MFS transporter;protein_id=WP_221068013.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2406594 2407832 . - . ID=gene-VA249_RS11070;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=VA249_RS11070;old_locus_tag=VYA_21020 NZ_AP024165.1 Protein Homology CDS 2406594 2407832 . - 0 ID=cds-WP_221068014.1;Parent=gene-VA249_RS11070;Dbxref=Genbank:WP_221068014.1;Name=WP_221068014.1;Ontology_term=GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: protein motif:HMM:NF006768.0;locus_tag=VA249_RS11070;product=allantoate deiminase;protein_id=WP_221068014.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2407875 2408924 . - . ID=gene-VA249_RS11075;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=VA249_RS11075;old_locus_tag=VYA_21030 NZ_AP024165.1 Protein Homology CDS 2407875 2408924 . - 0 ID=cds-WP_221068015.1;Parent=gene-VA249_RS11075;Dbxref=Genbank:WP_221068015.1;Name=WP_221068015.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:TIGR03175.1;locus_tag=VA249_RS11075;product=ureidoglycolate dehydrogenase;protein_id=WP_221068015.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2409058 2409864 . - . ID=gene-VA249_RS11080;Name=VA249_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11080;old_locus_tag=VYA_21040 NZ_AP024165.1 Protein Homology CDS 2409058 2409864 . - 0 ID=cds-WP_221068016.1;Parent=gene-VA249_RS11080;Dbxref=Genbank:WP_221068016.1;Name=WP_221068016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022834.2;locus_tag=VA249_RS11080;product=DUF2877 domain-containing protein;protein_id=WP_221068016.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2409914 2411182 . - . ID=gene-VA249_RS11085;Name=VA249_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11085;old_locus_tag=VYA_21050 NZ_AP024165.1 Protein Homology CDS 2409914 2411182 . - 0 ID=cds-WP_221068017.1;Parent=gene-VA249_RS11085;Dbxref=Genbank:WP_221068017.1;Name=WP_221068017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018275.2;locus_tag=VA249_RS11085;product=DUF1116 domain-containing protein;protein_id=WP_221068017.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2411192 2412859 . - . ID=gene-VA249_RS11090;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=VA249_RS11090;old_locus_tag=VYA_21060 NZ_AP024165.1 Protein Homology CDS 2411192 2412859 . - 0 ID=cds-WP_221068018.1;Parent=gene-VA249_RS11090;Dbxref=Genbank:WP_221068018.1;Name=WP_221068018.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF004760.0;locus_tag=VA249_RS11090;product=acyl-CoA synthetase FdrA;protein_id=WP_221068018.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2413214 2414143 . + . ID=gene-VA249_RS11095;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=VA249_RS11095;old_locus_tag=VYA_21070 NZ_AP024165.1 Protein Homology CDS 2413214 2414143 . + 0 ID=cds-WP_221068019.1;Parent=gene-VA249_RS11095;Dbxref=Genbank:WP_221068019.1;Name=WP_221068019.1;gbkey=CDS;gene=allS;inference=COORDINATES: protein motif:HMM:NF007501.0;locus_tag=VA249_RS11095;product=HTH-type transcriptional activator AllS;protein_id=WP_221068019.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2414129 2415070 . - . ID=gene-VA249_RS11100;Name=VA249_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11100;old_locus_tag=VYA_21080 NZ_AP024165.1 Protein Homology CDS 2414129 2415070 . - 0 ID=cds-WP_221068020.1;Parent=gene-VA249_RS11100;Dbxref=Genbank:WP_221068020.1;Name=WP_221068020.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004394418.1;locus_tag=VA249_RS11100;product=carbamate kinase;protein_id=WP_221068020.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2415301 2416089 . + . ID=gene-VA249_RS11105;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=VA249_RS11105;old_locus_tag=VYA_21090 NZ_AP024165.1 Protein Homology CDS 2415301 2416089 . + 0 ID=cds-WP_221068021.1;Parent=gene-VA249_RS11105;Dbxref=Genbank:WP_221068021.1;Name=WP_221068021.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: protein motif:HMM:TIGR03214.2;locus_tag=VA249_RS11105;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_221068021.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2416300 2417526 . + . ID=gene-VA249_RS11110;Name=VA249_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11110;old_locus_tag=VYA_21100 NZ_AP024165.1 Protein Homology CDS 2416300 2417526 . + 0 ID=cds-WP_221068022.1;Parent=gene-VA249_RS11110;Dbxref=Genbank:WP_221068022.1;Name=WP_221068022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020430921.1;locus_tag=VA249_RS11110;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_221068022.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2417578 2418852 . - . ID=gene-VA249_RS11115;Name=VA249_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11115;old_locus_tag=VYA_21110 NZ_AP024165.1 Protein Homology CDS 2417578 2418852 . - 0 ID=cds-WP_221068023.1;Parent=gene-VA249_RS11115;Dbxref=Genbank:WP_221068023.1;Name=WP_221068023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714173.1;locus_tag=VA249_RS11115;product=DUF3391 domain-containing protein;protein_id=WP_221068023.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2419060 2420580 . + . ID=gene-VA249_RS11120;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=VA249_RS11120;old_locus_tag=VYA_21120 NZ_AP024165.1 Protein Homology CDS 2419060 2420580 . + 0 ID=cds-WP_221068024.1;Parent=gene-VA249_RS11120;Dbxref=Genbank:WP_221068024.1;Name=WP_221068024.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139400.1;locus_tag=VA249_RS11120;product=glycerol kinase GlpK;protein_id=WP_221068024.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2420786 2422321 . + . ID=gene-VA249_RS11125;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=VA249_RS11125;old_locus_tag=VYA_21130 NZ_AP024165.1 Protein Homology CDS 2420786 2422321 . + 0 ID=cds-WP_221068025.1;Parent=gene-VA249_RS11125;Dbxref=Genbank:WP_221068025.1;Name=WP_221068025.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740377.1;locus_tag=VA249_RS11125;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_221068025.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2422584 2423699 . + . ID=gene-VA249_RS11130;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=VA249_RS11130;old_locus_tag=VYA_21140 NZ_AP024165.1 Protein Homology CDS 2422584 2423699 . + 0 ID=cds-WP_221068026.1;Parent=gene-VA249_RS11130;Dbxref=Genbank:WP_221068026.1;Name=WP_221068026.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436579.1;locus_tag=VA249_RS11130;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_221068026.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2423744 2424928 . - . ID=gene-VA249_RS11135;Name=VA249_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11135;old_locus_tag=VYA_21150 NZ_AP024165.1 Protein Homology CDS 2423744 2424928 . - 0 ID=cds-WP_221068027.1;Parent=gene-VA249_RS11135;Dbxref=Genbank:WP_221068027.1;Name=WP_221068027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008218671.1;locus_tag=VA249_RS11135;product=NnrS family protein;protein_id=WP_221068027.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2425152 2425703 . + . ID=gene-VA249_RS11140;Name=VA249_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11140;old_locus_tag=VYA_21160 NZ_AP024165.1 Protein Homology CDS 2425152 2425703 . + 0 ID=cds-WP_128810301.1;Parent=gene-VA249_RS11140;Dbxref=Genbank:WP_128810301.1;Name=WP_128810301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741491.1;locus_tag=VA249_RS11140;product=gamma-glutamylcyclotransferase;protein_id=WP_128810301.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2425889 2426887 . + . ID=gene-VA249_RS11145;Name=VA249_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11145;old_locus_tag=VYA_21170 NZ_AP024165.1 Protein Homology CDS 2425889 2426887 . + 0 ID=cds-WP_221068028.1;Parent=gene-VA249_RS11145;Dbxref=Genbank:WP_221068028.1;Name=WP_221068028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005304310.1;locus_tag=VA249_RS11145;product=substrate-binding domain-containing protein;protein_id=WP_221068028.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2427044 2428102 . - . ID=gene-VA249_RS11150;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=VA249_RS11150;old_locus_tag=VYA_21180 NZ_AP024165.1 Protein Homology CDS 2427044 2428102 . - 0 ID=cds-WP_221068029.1;Parent=gene-VA249_RS11150;Dbxref=Genbank:WP_221068029.1;Name=WP_221068029.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817719.1;locus_tag=VA249_RS11150;product=galactose-1-epimerase;protein_id=WP_221068029.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2428155 2429315 . - . ID=gene-VA249_RS11155;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=VA249_RS11155;old_locus_tag=VYA_21190 NZ_AP024165.1 Protein Homology CDS 2428155 2429315 . - 0 ID=cds-WP_221068030.1;Parent=gene-VA249_RS11155;Dbxref=Genbank:WP_221068030.1;Name=WP_221068030.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734423.1;locus_tag=VA249_RS11155;product=galactokinase;protein_id=WP_221068030.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2429427 2430479 . - . ID=gene-VA249_RS11160;Name=VA249_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11160;old_locus_tag=VYA_21200 NZ_AP024165.1 Protein Homology CDS 2429427 2430479 . - 0 ID=cds-WP_009707482.1;Parent=gene-VA249_RS11160;Dbxref=Genbank:WP_009707482.1;Name=WP_009707482.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335215.1;locus_tag=VA249_RS11160;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_009707482.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2430647 2431657 . - . ID=gene-VA249_RS11165;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=VA249_RS11165;old_locus_tag=VYA_21210 NZ_AP024165.1 Protein Homology CDS 2430647 2431657 . - 0 ID=cds-WP_039986204.1;Parent=gene-VA249_RS11165;Dbxref=Genbank:WP_039986204.1;Name=WP_039986204.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128765.1;locus_tag=VA249_RS11165;product=UDP-glucose 4-epimerase GalE;protein_id=WP_039986204.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2432063 2433067 . + . ID=gene-VA249_RS11170;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=VA249_RS11170;old_locus_tag=VYA_21220 NZ_AP024165.1 Protein Homology CDS 2432063 2433067 . + 0 ID=cds-WP_221068031.1;Parent=gene-VA249_RS11170;Dbxref=Genbank:WP_221068031.1;Name=WP_221068031.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494135.1;locus_tag=VA249_RS11170;product=transcriptional regulator EbgR;protein_id=WP_221068031.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2433271 2434188 . - . ID=gene-VA249_RS11175;Name=VA249_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11175;old_locus_tag=VYA_21230 NZ_AP024165.1 Protein Homology CDS 2433271 2434188 . - 0 ID=cds-WP_221068032.1;Parent=gene-VA249_RS11175;Dbxref=Genbank:WP_221068032.1;Name=WP_221068032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427459.1;locus_tag=VA249_RS11175;product=LysR substrate-binding domain-containing protein;protein_id=WP_221068032.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2434303 2435442 . + . ID=gene-VA249_RS11180;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=VA249_RS11180;old_locus_tag=VYA_21240 NZ_AP024165.1 Protein Homology CDS 2434303 2435442 . + 0 ID=cds-WP_221068033.1;Parent=gene-VA249_RS11180;Dbxref=Genbank:WP_221068033.1;Name=WP_221068033.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005380170.1;locus_tag=VA249_RS11180;product=chromate efflux transporter;protein_id=WP_221068033.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2435692 2437383 . + . ID=gene-VA249_RS11185;Name=VA249_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11185;old_locus_tag=VYA_21250 NZ_AP024165.1 Protein Homology CDS 2435692 2437383 . + 0 ID=cds-WP_221068034.1;Parent=gene-VA249_RS11185;Dbxref=Genbank:WP_221068034.1;Name=WP_221068034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391687.1;locus_tag=VA249_RS11185;product=AMP-binding protein;protein_id=WP_221068034.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2437545 2439632 . - . ID=gene-VA249_RS11190;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=VA249_RS11190;old_locus_tag=VYA_21260 NZ_AP024165.1 Protein Homology CDS 2437545 2439632 . - 0 ID=cds-WP_211916060.1;Parent=gene-VA249_RS11190;Dbxref=Genbank:WP_211916060.1;Name=WP_211916060.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774524.1;locus_tag=VA249_RS11190;product=elongation factor G;protein_id=WP_211916060.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2439835 2441214 . - . ID=gene-VA249_RS11195;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=VA249_RS11195;old_locus_tag=VYA_21270 NZ_AP024165.1 Protein Homology CDS 2439835 2441214 . - 0 ID=cds-WP_221068035.1;Parent=gene-VA249_RS11195;Dbxref=Genbank:WP_221068035.1;Name=WP_221068035.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017035767.1;locus_tag=VA249_RS11195;product=DNA repair protein RadA;protein_id=WP_221068035.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2441364 2443712 . + . ID=gene-VA249_RS11200;Name=VA249_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11200;old_locus_tag=VYA_21280 NZ_AP024165.1 Protein Homology CDS 2441364 2443712 . + 0 ID=cds-WP_221068036.1;Parent=gene-VA249_RS11200;Dbxref=Genbank:WP_221068036.1;Name=WP_221068036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635880.1;locus_tag=VA249_RS11200;product=PilZ domain-containing protein;protein_id=WP_221068036.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2443805 2444785 . - . ID=gene-VA249_RS11205;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=VA249_RS11205;old_locus_tag=VYA_21290 NZ_AP024165.1 Protein Homology CDS 2443805 2444785 . - 0 ID=cds-WP_221068037.1;Parent=gene-VA249_RS11205;Dbxref=Genbank:WP_221068037.1;Name=WP_221068037.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436210.1;locus_tag=VA249_RS11205;product=phosphoserine phosphatase;protein_id=WP_221068037.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2444876 2445481 . + . ID=gene-VA249_RS11210;Name=VA249_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11210;old_locus_tag=VYA_21300 NZ_AP024165.1 Protein Homology CDS 2444876 2445481 . + 0 ID=cds-WP_211916057.1;Parent=gene-VA249_RS11210;Dbxref=Genbank:WP_211916057.1;Name=WP_211916057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439517.1;locus_tag=VA249_RS11210;product=YtjB family periplasmic protein;protein_id=WP_211916057.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2445575 2446294 . - . ID=gene-VA249_RS11215;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=VA249_RS11215;old_locus_tag=VYA_21310 NZ_AP024165.1 Protein Homology CDS 2445575 2446294 . - 0 ID=cds-WP_128810288.1;Parent=gene-VA249_RS11215;Dbxref=Genbank:WP_128810288.1;Name=WP_128810288.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005473519.1;locus_tag=VA249_RS11215;product=purine-nucleoside phosphorylase;protein_id=WP_128810288.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2446482 2447702 . - . ID=gene-VA249_RS11220;Name=VA249_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11220;old_locus_tag=VYA_21320 NZ_AP024165.1 Protein Homology CDS 2446482 2447702 . - 0 ID=cds-WP_221068038.1;Parent=gene-VA249_RS11220;Dbxref=Genbank:WP_221068038.1;Name=WP_221068038.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004415391.1;locus_tag=VA249_RS11220;product=phosphopentomutase;protein_id=WP_221068038.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2447771 2449099 . - . ID=gene-VA249_RS11225;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=VA249_RS11225;old_locus_tag=VYA_21330 NZ_AP024165.1 Protein Homology CDS 2447771 2449099 . - 0 ID=cds-WP_221068039.1;Parent=gene-VA249_RS11225;Dbxref=Genbank:WP_221068039.1;Name=WP_221068039.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008218776.1;locus_tag=VA249_RS11225;product=thymidine phosphorylase;protein_id=WP_221068039.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2449199 2449975 . - . ID=gene-VA249_RS11230;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=VA249_RS11230;old_locus_tag=VYA_21340 NZ_AP024165.1 Protein Homology CDS 2449199 2449975 . - 0 ID=cds-WP_128810285.1;Parent=gene-VA249_RS11230;Dbxref=Genbank:WP_128810285.1;Name=WP_128810285.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436196.1;locus_tag=VA249_RS11230;product=deoxyribose-phosphate aldolase;protein_id=WP_128810285.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2450551 2451834 . - . ID=gene-VA249_RS11235;Name=VA249_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11235;old_locus_tag=VYA_21350 NZ_AP024165.1 Protein Homology CDS 2450551 2451834 . - 0 ID=cds-WP_221068040.1;Parent=gene-VA249_RS11235;Dbxref=Genbank:WP_221068040.1;Name=WP_221068040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128806.1;locus_tag=VA249_RS11235;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_221068040.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2452039 2452812 . - . ID=gene-VA249_RS11240;Name=VA249_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11240;old_locus_tag=VYA_21360 NZ_AP024165.1 Protein Homology CDS 2452039 2452812 . - 0 ID=cds-WP_221068041.1;Parent=gene-VA249_RS11240;Dbxref=Genbank:WP_221068041.1;Name=WP_221068041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189165.1;locus_tag=VA249_RS11240;product=TatD family hydrolase;protein_id=WP_221068041.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2452799 2452966 . - . ID=gene-VA249_RS11245;Name=VA249_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11245;old_locus_tag=VYA_21370 NZ_AP024165.1 Protein Homology CDS 2452799 2452966 . - 0 ID=cds-WP_211916051.1;Parent=gene-VA249_RS11245;Dbxref=Genbank:WP_211916051.1;Name=WP_211916051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189164.1;locus_tag=VA249_RS11245;product=DUF5363 family protein;protein_id=WP_211916051.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2453069 2454658 . - . ID=gene-VA249_RS11250;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=VA249_RS11250;old_locus_tag=VYA_21380 NZ_AP024165.1 Protein Homology CDS 2453069 2454658 . - 0 ID=cds-WP_211916050.1;Parent=gene-VA249_RS11250;Dbxref=Genbank:WP_211916050.1;Name=WP_211916050.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017419803.1;locus_tag=VA249_RS11250;product=peptide chain release factor 3;protein_id=WP_211916050.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2454788 2455243 . - . ID=gene-VA249_RS11255;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=VA249_RS11255;old_locus_tag=VYA_21390 NZ_AP024165.1 Protein Homology CDS 2454788 2455243 . - 0 ID=cds-WP_221068042.1;Parent=gene-VA249_RS11255;Dbxref=Genbank:WP_221068042.1;Name=WP_221068042.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=ribosomal protein S5-alanine alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698717.1;locus_tag=VA249_RS11255;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_221068042.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2455256 2455654 . - . ID=gene-VA249_RS11260;Name=VA249_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11260;old_locus_tag=VYA_21400 NZ_AP024165.1 Protein Homology CDS 2455256 2455654 . - 0 ID=cds-WP_221068043.1;Parent=gene-VA249_RS11260;Dbxref=Genbank:WP_221068043.1;Name=WP_221068043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128810.1;locus_tag=VA249_RS11260;product=DNA polymerase III subunit psi;protein_id=WP_221068043.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2455718 2456170 . + . ID=gene-VA249_RS11265;Name=VA249_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11265;old_locus_tag=VYA_21410 NZ_AP024165.1 Protein Homology CDS 2455718 2456170 . + 0 ID=cds-WP_221068044.1;Parent=gene-VA249_RS11265;Dbxref=Genbank:WP_221068044.1;Name=WP_221068044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450037.1;locus_tag=VA249_RS11265;product=hypothetical protein;protein_id=WP_221068044.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2456292 2456795 . - . ID=gene-VA249_RS11270;Name=VA249_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11270;old_locus_tag=VYA_21420 NZ_AP024165.1 Protein Homology CDS 2456292 2456795 . - 0 ID=cds-WP_221068045.1;Parent=gene-VA249_RS11270;Dbxref=Genbank:WP_221068045.1;Name=WP_221068045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447717.1;locus_tag=VA249_RS11270;product=N-acetyltransferase;protein_id=WP_221068045.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2456779 2457306 . - . ID=gene-VA249_RS11275;Name=VA249_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11275;old_locus_tag=VYA_21430 NZ_AP024165.1 Protein Homology CDS 2456779 2457306 . - 0 ID=cds-WP_164837146.1;Parent=gene-VA249_RS11275;Dbxref=Genbank:WP_164837146.1;Name=WP_164837146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394645.1;locus_tag=VA249_RS11275;product=SCP2 domain-containing protein;protein_id=WP_164837146.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2457573 2459612 . + . ID=gene-VA249_RS11280;Name=VA249_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11280;old_locus_tag=VYA_21440 NZ_AP024165.1 Protein Homology CDS 2457573 2459612 . + 0 ID=cds-WP_221068046.1;Parent=gene-VA249_RS11280;Dbxref=Genbank:WP_221068046.1;Name=WP_221068046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333899.1;locus_tag=VA249_RS11280;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_221068046.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2459760 2460773 . + . ID=gene-VA249_RS11285;Name=VA249_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11285;old_locus_tag=VYA_21450 NZ_AP024165.1 Protein Homology CDS 2459760 2460773 . + 0 ID=cds-WP_128810278.1;Parent=gene-VA249_RS11285;Dbxref=Genbank:WP_128810278.1;Name=WP_128810278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421320.1;locus_tag=VA249_RS11285;product=U32 family peptidase;protein_id=WP_128810278.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2460794 2461672 . + . ID=gene-VA249_RS11290;Name=VA249_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11290;old_locus_tag=VYA_21460 NZ_AP024165.1 Protein Homology CDS 2460794 2461672 . + 0 ID=cds-WP_221069938.1;Parent=gene-VA249_RS11290;Dbxref=Genbank:WP_221069938.1;Name=WP_221069938.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297223.1;locus_tag=VA249_RS11290;product=U32 family peptidase;protein_id=WP_221069938.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2461814 2463160 . - . ID=gene-VA249_RS11295;Name=VA249_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11295;old_locus_tag=VYA_21470 NZ_AP024165.1 Protein Homology CDS 2461814 2463160 . - 0 ID=cds-WP_221068047.1;Parent=gene-VA249_RS11295;Dbxref=Genbank:WP_221068047.1;Name=WP_221068047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698720.1;locus_tag=VA249_RS11295;product=MATE family efflux transporter;protein_id=WP_221068047.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2463217 2463630 . - . ID=gene-VA249_RS11300;Name=VA249_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11300;old_locus_tag=VYA_21480 NZ_AP024165.1 Protein Homology CDS 2463217 2463630 . - 0 ID=cds-WP_221068048.1;Parent=gene-VA249_RS11300;Dbxref=Genbank:WP_221068048.1;Name=WP_221068048.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020193890.1;locus_tag=VA249_RS11300;product=MarR family transcriptional regulator;protein_id=WP_221068048.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2463730 2464653 . - . ID=gene-VA249_RS11305;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=VA249_RS11305;old_locus_tag=VYA_21490 NZ_AP024165.1 Protein Homology CDS 2463730 2464653 . - 0 ID=cds-WP_221068049.1;Parent=gene-VA249_RS11305;Dbxref=Genbank:WP_221068049.1;Name=WP_221068049.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449143.1;locus_tag=VA249_RS11305;product=lipoprotein NlpI;protein_id=WP_221068049.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2464829 2466964 . - . ID=gene-VA249_RS11310;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=VA249_RS11310;old_locus_tag=VYA_21500 NZ_AP024165.1 Protein Homology CDS 2464829 2466964 . - 0 ID=cds-WP_128810273.1;Parent=gene-VA249_RS11310;Dbxref=Genbank:WP_128810273.1;Name=WP_128810273.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128820.1;locus_tag=VA249_RS11310;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_128810273.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2467285 2467554 . - . ID=gene-VA249_RS11315;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=VA249_RS11315;old_locus_tag=VYA_21510 NZ_AP024165.1 Protein Homology CDS 2467285 2467554 . - 0 ID=cds-WP_005380094.1;Parent=gene-VA249_RS11315;Dbxref=Genbank:WP_005380094.1;Name=WP_005380094.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=VA249_RS11315;product=30S ribosomal protein S15;protein_id=WP_005380094.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2467705 2468649 . - . ID=gene-VA249_RS11320;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=VA249_RS11320;old_locus_tag=VYA_21520 NZ_AP024165.1 Protein Homology CDS 2467705 2468649 . - 0 ID=cds-WP_211916044.1;Parent=gene-VA249_RS11320;Dbxref=Genbank:WP_211916044.1;Name=WP_211916044.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649842.1;locus_tag=VA249_RS11320;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_211916044.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2468649 2469065 . - . ID=gene-VA249_RS11325;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=VA249_RS11325;old_locus_tag=VYA_21530 NZ_AP024165.1 Protein Homology CDS 2468649 2469065 . - 0 ID=cds-WP_128810271.1;Parent=gene-VA249_RS11325;Dbxref=Genbank:WP_128810271.1;Name=WP_128810271.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006877386.1;locus_tag=VA249_RS11325;product=30S ribosome-binding factor RbfA;protein_id=WP_128810271.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2469175 2471862 . - . ID=gene-VA249_RS11330;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=VA249_RS11330;old_locus_tag=VYA_21540 NZ_AP024165.1 Protein Homology CDS 2469175 2471862 . - 0 ID=cds-WP_211916042.1;Parent=gene-VA249_RS11330;Dbxref=Genbank:WP_211916042.1;Name=WP_211916042.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008072190.1;locus_tag=VA249_RS11330;product=translation initiation factor IF-2;protein_id=WP_211916042.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2471887 2473371 . - . ID=gene-VA249_RS11335;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=VA249_RS11335;old_locus_tag=VYA_21550 NZ_AP024165.1 Protein Homology CDS 2471887 2473371 . - 0 ID=cds-WP_211916041.1;Parent=gene-VA249_RS11335;Dbxref=Genbank:WP_211916041.1;Name=WP_211916041.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332046.1;locus_tag=VA249_RS11335;product=transcription termination factor NusA;protein_id=WP_211916041.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2473408 2473863 . - . ID=gene-VA249_RS11340;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=VA249_RS11340;old_locus_tag=VYA_21560 NZ_AP024165.1 Protein Homology CDS 2473408 2473863 . - 0 ID=cds-WP_221068050.1;Parent=gene-VA249_RS11340;Dbxref=Genbank:WP_221068050.1;Name=WP_221068050.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=VA249_RS11340;product=ribosome maturation factor RimP;protein_id=WP_221068050.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2474094 2474170 . - . ID=gene-VA249_RS11345;Name=VA249_RS11345;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11345;old_locus_tag=VYA_t00550 NZ_AP024165.1 tRNAscan-SE tRNA 2474094 2474170 . - . ID=rna-VA249_RS11345;Parent=gene-VA249_RS11345;anticodon=(pos:complement(2474134..2474136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11345;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 2474094 2474170 . - . ID=exon-VA249_RS11345-1;Parent=rna-VA249_RS11345;anticodon=(pos:complement(2474134..2474136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11345;product=tRNA-Met NZ_AP024165.1 RefSeq gene 2474227 2474310 . - . ID=gene-VA249_RS11350;Name=VA249_RS11350;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11350;old_locus_tag=VYA_t00560 NZ_AP024165.1 tRNAscan-SE tRNA 2474227 2474310 . - . ID=rna-VA249_RS11350;Parent=gene-VA249_RS11350;anticodon=(pos:complement(2474274..2474276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11350;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 2474227 2474310 . - . ID=exon-VA249_RS11350-1;Parent=rna-VA249_RS11350;anticodon=(pos:complement(2474274..2474276));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11350;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 2474329 2474667 . - . ID=gene-VA249_RS11355;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=VA249_RS11355;old_locus_tag=VYA_21570 NZ_AP024165.1 Protein Homology CDS 2474329 2474667 . - 0 ID=cds-WP_128810268.1;Parent=gene-VA249_RS11355;Dbxref=Genbank:WP_128810268.1;Name=WP_128810268.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004415521.1;locus_tag=VA249_RS11355;product=preprotein translocase subunit SecG;protein_id=WP_128810268.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2474924 2476264 . - . ID=gene-VA249_RS11360;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=VA249_RS11360;old_locus_tag=VYA_21580 NZ_AP024165.1 Protein Homology CDS 2474924 2476264 . - 0 ID=cds-WP_221068051.1;Parent=gene-VA249_RS11360;Dbxref=Genbank:WP_221068051.1;Name=WP_221068051.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013857621.1;locus_tag=VA249_RS11360;product=phosphoglucosamine mutase;protein_id=WP_221068051.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2476285 2477115 . - . ID=gene-VA249_RS11365;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=VA249_RS11365;old_locus_tag=VYA_21590 NZ_AP024165.1 Protein Homology CDS 2476285 2477115 . - 0 ID=cds-WP_221069941.1;Parent=gene-VA249_RS11365;Dbxref=Genbank:WP_221069941.1;Name=WP_221069941.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698723.1;locus_tag=VA249_RS11365;product=dihydropteroate synthase;protein_id=WP_221069941.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2477168 2479147 . - . ID=gene-VA249_RS11370;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=VA249_RS11370;old_locus_tag=VYA_21600 NZ_AP024165.1 Protein Homology CDS 2477168 2479147 . - 0 ID=cds-WP_221068052.1;Parent=gene-VA249_RS11370;Dbxref=Genbank:WP_221068052.1;Name=WP_221068052.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707529.1;locus_tag=VA249_RS11370;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_221068052.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2479256 2479885 . - . ID=gene-VA249_RS11375;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=VA249_RS11375;old_locus_tag=VYA_21610 NZ_AP024165.1 Protein Homology CDS 2479256 2479885 . - 0 ID=cds-WP_128810266.1;Parent=gene-VA249_RS11375;Dbxref=Genbank:WP_128810266.1;Name=WP_128810266.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006958070.1;locus_tag=VA249_RS11375;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_128810266.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2480024 2480320 . + . ID=gene-VA249_RS11380;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=VA249_RS11380;old_locus_tag=VYA_21620 NZ_AP024165.1 Protein Homology CDS 2480024 2480320 . + 0 ID=cds-WP_009842966.1;Parent=gene-VA249_RS11380;Dbxref=Genbank:WP_009842966.1;Name=WP_009842966.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054291.1;locus_tag=VA249_RS11380;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_009842966.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2480390 2480863 . - . ID=gene-VA249_RS11385;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=VA249_RS11385;old_locus_tag=VYA_21630 NZ_AP024165.1 Protein Homology CDS 2480390 2480863 . - 0 ID=cds-WP_128810265.1;Parent=gene-VA249_RS11385;Dbxref=Genbank:WP_128810265.1;Name=WP_128810265.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008073338.1;locus_tag=VA249_RS11385;product=transcription elongation factor GreA;protein_id=WP_128810265.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2481400 2482410 . + . ID=gene-VA249_RS11390;Name=VA249_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11390;old_locus_tag=VYA_21640 NZ_AP024165.1 Protein Homology CDS 2481400 2482410 . + 0 ID=cds-WP_128810264.1;Parent=gene-VA249_RS11390;Dbxref=Genbank:WP_128810264.1;Name=WP_128810264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044323.1;locus_tag=VA249_RS11390;product=porin;protein_id=WP_128810264.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2482528 2483952 . + . ID=gene-VA249_RS11395;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=VA249_RS11395;old_locus_tag=VYA_21650 NZ_AP024165.1 Protein Homology CDS 2482528 2483952 . + 0 ID=cds-WP_221068053.1;Parent=gene-VA249_RS11395;Dbxref=Genbank:WP_221068053.1;Name=WP_221068053.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005479070.1;locus_tag=VA249_RS11395;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_221068053.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2483931 2484776 . - . ID=gene-VA249_RS11400;Name=VA249_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11400;old_locus_tag=VYA_21660 NZ_AP024165.1 Protein Homology CDS 2483931 2484776 . - 0 ID=cds-WP_211916038.1;Parent=gene-VA249_RS11400;Dbxref=Genbank:WP_211916038.1;Name=WP_211916038.1;Ontology_term=GO:0006812,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017036714.1;locus_tag=VA249_RS11400;product=magnesium transporter;protein_id=WP_211916038.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2485220 2486407 . - . ID=gene-VA249_RS11405;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=VA249_RS11405;old_locus_tag=VYA_21670 NZ_AP024165.1 Protein Homology CDS 2485220 2486407 . - 0 ID=cds-WP_128810262.1;Parent=gene-VA249_RS11405;Dbxref=Genbank:WP_128810262.1;Name=WP_128810262.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006958077.1;locus_tag=VA249_RS11405;product=tyrosine--tRNA ligase;protein_id=WP_128810262.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2486537 2487826 . + . ID=gene-VA249_RS11410;Name=VA249_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11410;old_locus_tag=VYA_21680 NZ_AP024165.1 Protein Homology CDS 2486537 2487826 . + 0 ID=cds-WP_221068054.1;Parent=gene-VA249_RS11410;Dbxref=Genbank:WP_221068054.1;Name=WP_221068054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530355.1;locus_tag=VA249_RS11410;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_221068054.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2487858 2490992 . - . ID=gene-VA249_RS11415;Name=VA249_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11415;old_locus_tag=VYA_21690 NZ_AP024165.1 Protein Homology CDS 2487858 2490992 . - 0 ID=cds-WP_221068055.1;Parent=gene-VA249_RS11415;Dbxref=Genbank:WP_221068055.1;Name=WP_221068055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196578.1;locus_tag=VA249_RS11415;product=efflux RND transporter permease subunit;protein_id=WP_221068055.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2491002 2492126 . - . ID=gene-VA249_RS11420;Name=VA249_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11420;old_locus_tag=VYA_21700 NZ_AP024165.1 Protein Homology CDS 2491002 2492126 . - 0 ID=cds-WP_221068056.1;Parent=gene-VA249_RS11420;Dbxref=Genbank:WP_221068056.1;Name=WP_221068056.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189153.1;locus_tag=VA249_RS11420;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221068056.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2492234 2492575 . - . ID=gene-VA249_RS11425;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=VA249_RS11425;old_locus_tag=VYA_21710 NZ_AP024165.1 Protein Homology CDS 2492234 2492575 . - 0 ID=cds-WP_211916035.1;Parent=gene-VA249_RS11425;Dbxref=Genbank:WP_211916035.1;Name=WP_211916035.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011217307.1;locus_tag=VA249_RS11425;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_211916035.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2492813 2494108 . + . ID=gene-VA249_RS11430;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=VA249_RS11430;old_locus_tag=VYA_21720 NZ_AP024165.1 Protein Homology CDS 2492813 2494108 . + 0 ID=cds-WP_128810258.1;Parent=gene-VA249_RS11430;Dbxref=Genbank:WP_128810258.1;Name=WP_128810258.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841437.1;locus_tag=VA249_RS11430;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_128810258.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2494507 2495592 . + . ID=gene-VA249_RS11435;Name=VA249_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11435;old_locus_tag=VYA_21730 NZ_AP024165.1 Protein Homology CDS 2494507 2495592 . + 0 ID=cds-WP_221068057.1;Parent=gene-VA249_RS11435;Dbxref=Genbank:WP_221068057.1;Name=WP_221068057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743285.1;locus_tag=VA249_RS11435;product=AI-2E family transporter;protein_id=WP_221068057.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2495700 2496725 . + . ID=gene-VA249_RS11440;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=VA249_RS11440;old_locus_tag=VYA_21740 NZ_AP024165.1 Protein Homology CDS 2495700 2496725 . + 0 ID=cds-WP_211916032.1;Parent=gene-VA249_RS11440;Dbxref=Genbank:WP_211916032.1;Name=WP_211916032.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005386543.1;locus_tag=VA249_RS11440;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_211916032.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2496952 2500338 . + . ID=gene-VA249_RS11445;Name=VA249_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11445;old_locus_tag=VYA_21750 NZ_AP024165.1 Protein Homology CDS 2496952 2500338 . + 0 ID=cds-WP_221068058.1;Parent=gene-VA249_RS11445;Dbxref=Genbank:WP_221068058.1;Name=WP_221068058.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016787808.1;locus_tag=VA249_RS11445;product=response regulator;protein_id=WP_221068058.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2501254 2502936 . + . ID=gene-VA249_RS11450;Name=VA249_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11450;old_locus_tag=VYA_21760 NZ_AP024165.1 Protein Homology CDS 2501254 2502936 . + 0 ID=cds-WP_221068059.1;Parent=gene-VA249_RS11450;Dbxref=Genbank:WP_221068059.1;Name=WP_221068059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332024.1;locus_tag=VA249_RS11450;product=ABC transporter substrate-binding protein;protein_id=WP_221068059.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2503107 2504093 . + . ID=gene-VA249_RS11455;Name=VA249_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11455;old_locus_tag=VYA_21770 NZ_AP024165.1 Protein Homology CDS 2503107 2504093 . + 0 ID=cds-WP_041058689.1;Parent=gene-VA249_RS11455;Dbxref=Genbank:WP_041058689.1;Name=WP_041058689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004742646.1;locus_tag=VA249_RS11455;product=ABC transporter permease;protein_id=WP_041058689.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2504096 2505121 . + . ID=gene-VA249_RS11460;Name=VA249_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11460;old_locus_tag=VYA_21780 NZ_AP024165.1 Protein Homology CDS 2504096 2505121 . + 0 ID=cds-WP_221068060.1;Parent=gene-VA249_RS11460;Dbxref=Genbank:WP_221068060.1;Name=WP_221068060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646272.1;locus_tag=VA249_RS11460;product=ABC transporter permease;protein_id=WP_221068060.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2505124 2506107 . + . ID=gene-VA249_RS11465;Name=VA249_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11465;old_locus_tag=VYA_21790 NZ_AP024165.1 Protein Homology CDS 2505124 2506107 . + 0 ID=cds-WP_221068061.1;Parent=gene-VA249_RS11465;Dbxref=Genbank:WP_221068061.1;Name=WP_221068061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817691.1;locus_tag=VA249_RS11465;product=ABC transporter ATP-binding protein;protein_id=WP_221068061.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2506152 2507147 . + . ID=gene-VA249_RS11470;Name=VA249_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11470;old_locus_tag=VYA_21800 NZ_AP024165.1 Protein Homology CDS 2506152 2507147 . + 0 ID=cds-WP_128810253.1;Parent=gene-VA249_RS11470;Dbxref=Genbank:WP_128810253.1;Name=WP_128810253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461254.1;locus_tag=VA249_RS11470;product=ABC transporter ATP-binding protein;protein_id=WP_128810253.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2507217 2508956 . + . ID=gene-VA249_RS11475;Name=VA249_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11475;old_locus_tag=VYA_21810 NZ_AP024165.1 Protein Homology CDS 2507217 2508956 . + 0 ID=cds-WP_221068062.1;Parent=gene-VA249_RS11475;Dbxref=Genbank:WP_221068062.1;Name=WP_221068062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707541.1;locus_tag=VA249_RS11475;product=glycoside hydrolase family 9 protein;protein_id=WP_221068062.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2508959 2509855 . + . ID=gene-VA249_RS11480;Name=VA249_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11480;old_locus_tag=VYA_21820 NZ_AP024165.1 Protein Homology CDS 2508959 2509855 . + 0 ID=cds-WP_221068063.1;Parent=gene-VA249_RS11480;Dbxref=Genbank:WP_221068063.1;Name=WP_221068063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333920.1;locus_tag=VA249_RS11480;product=N-acetylglucosamine kinase;protein_id=WP_221068063.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2509858 2511777 . + . ID=gene-VA249_RS11485;Name=VA249_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11485;old_locus_tag=VYA_21830 NZ_AP024165.1 Protein Homology CDS 2509858 2511777 . + 0 ID=cds-WP_221068064.1;Parent=gene-VA249_RS11485;Dbxref=Genbank:WP_221068064.1;Name=WP_221068064.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439405.1;locus_tag=VA249_RS11485;product=family 20 glycosylhydrolase;protein_id=WP_221068064.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2511864 2514272 . + . ID=gene-VA249_RS11490;Name=VA249_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11490;old_locus_tag=VYA_21840 NZ_AP024165.1 Protein Homology CDS 2511864 2514272 . + 0 ID=cds-WP_221068065.1;Parent=gene-VA249_RS11490;Dbxref=Genbank:WP_221068065.1;Name=WP_221068065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019824374.1;locus_tag=VA249_RS11490;product=N%2CN'-diacetylchitobiose phosphorylase;protein_id=WP_221068065.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2514399 2515811 . + . ID=gene-VA249_RS11495;Name=VA249_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11495;old_locus_tag=VYA_21850 NZ_AP024165.1 Protein Homology CDS 2514399 2515811 . + 0 ID=cds-WP_221068066.1;Parent=gene-VA249_RS11495;Dbxref=Genbank:WP_221068066.1;Name=WP_221068066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589187.1;locus_tag=VA249_RS11495;product=phosphoglucomutase/phosphomannomutase family protein;protein_id=WP_221068066.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2515911 2516942 . - . ID=gene-VA249_RS11500;Name=VA249_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11500;old_locus_tag=VYA_21860 NZ_AP024165.1 Protein Homology CDS 2515911 2516942 . - 0 ID=cds-WP_221068067.1;Parent=gene-VA249_RS11500;Dbxref=Genbank:WP_221068067.1;Name=WP_221068067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649786.1;locus_tag=VA249_RS11500;product=ABC transporter ATP-binding protein;protein_id=WP_221068067.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2516942 2518567 . - . ID=gene-VA249_RS11505;Name=VA249_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11505;old_locus_tag=VYA_21870 NZ_AP024165.1 Protein Homology CDS 2516942 2518567 . - 0 ID=cds-WP_221068068.1;Parent=gene-VA249_RS11505;Dbxref=Genbank:WP_221068068.1;Name=WP_221068068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439401.1;locus_tag=VA249_RS11505;product=iron ABC transporter permease;protein_id=WP_221068068.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2518667 2519680 . - . ID=gene-VA249_RS11510;Name=VA249_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11510;old_locus_tag=VYA_21880 NZ_AP024165.1 Protein Homology CDS 2518667 2519680 . - 0 ID=cds-WP_221068069.1;Parent=gene-VA249_RS11510;Dbxref=Genbank:WP_221068069.1;Name=WP_221068069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128851.1;locus_tag=VA249_RS11510;product=Fe(3+) ABC transporter substrate-binding protein;protein_id=WP_221068069.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2519834 2521063 . - . ID=gene-VA249_RS11515;Name=VA249_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11515;old_locus_tag=VYA_21890 NZ_AP024165.1 Protein Homology CDS 2519834 2521063 . - 0 ID=cds-WP_221068070.1;Parent=gene-VA249_RS11515;Dbxref=Genbank:WP_221068070.1;Name=WP_221068070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707547.1;locus_tag=VA249_RS11515;product=ammonium transporter;protein_id=WP_221068070.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2521089 2521427 . - . ID=gene-VA249_RS11520;Name=VA249_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11520;old_locus_tag=VYA_21900 NZ_AP024165.1 Protein Homology CDS 2521089 2521427 . - 0 ID=cds-WP_005439398.1;Parent=gene-VA249_RS11520;Dbxref=Genbank:WP_005439398.1;Name=WP_005439398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767166.1;locus_tag=VA249_RS11520;product=P-II family nitrogen regulator;protein_id=WP_005439398.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2521617 2521985 . - . ID=gene-VA249_RS11525;Name=VA249_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11525;old_locus_tag=VYA_21910 NZ_AP024165.1 Protein Homology CDS 2521617 2521985 . - 0 ID=cds-WP_211916020.1;Parent=gene-VA249_RS11525;Dbxref=Genbank:WP_211916020.1;Name=WP_211916020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005494019.1;locus_tag=VA249_RS11525;product=YacL family protein;protein_id=WP_211916020.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2522249 2523400 . + . ID=gene-VA249_RS11530;Name=VA249_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11530;old_locus_tag=VYA_21920 NZ_AP024165.1 Protein Homology CDS 2522249 2523400 . + 0 ID=cds-WP_221068071.1;Parent=gene-VA249_RS11530;Dbxref=Genbank:WP_221068071.1;Name=WP_221068071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005593212.1;locus_tag=VA249_RS11530;product=helix-turn-helix domain-containing protein;protein_id=WP_221068071.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2523534 2524799 . + . ID=gene-VA249_RS11535;Name=VA249_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11535;old_locus_tag=VYA_21930 NZ_AP024165.1 Protein Homology CDS 2523534 2524799 . + 0 ID=cds-WP_128810242.1;Parent=gene-VA249_RS11535;Dbxref=Genbank:WP_128810242.1;Name=WP_128810242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079576.1;locus_tag=VA249_RS11535;product=GntP family permease;protein_id=WP_128810242.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2524817 2525950 . + . ID=gene-VA249_RS11540;Name=VA249_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11540;old_locus_tag=VYA_21940 NZ_AP024165.1 Protein Homology CDS 2524817 2525950 . + 0 ID=cds-WP_221068072.1;Parent=gene-VA249_RS11540;Dbxref=Genbank:WP_221068072.1;Name=WP_221068072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713858.1;locus_tag=VA249_RS11540;product=glycerate kinase;protein_id=WP_221068072.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2526039 2528627 . - . ID=gene-VA249_RS11545;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=VA249_RS11545;old_locus_tag=VYA_21950 NZ_AP024165.1 Protein Homology CDS 2526039 2528627 . - 0 ID=cds-WP_221068073.1;Parent=gene-VA249_RS11545;Dbxref=Genbank:WP_221068073.1;Name=WP_221068073.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447693.1;locus_tag=VA249_RS11545;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_221068073.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2528898 2531207 . - . ID=gene-VA249_RS11550;Name=VA249_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11550;old_locus_tag=VYA_21960 NZ_AP024165.1 Protein Homology CDS 2528898 2531207 . - 0 ID=cds-WP_221068074.1;Parent=gene-VA249_RS11550;Dbxref=Genbank:WP_221068074.1;Name=WP_221068074.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707551.1;locus_tag=VA249_RS11550;product=patatin-like phospholipase family protein;protein_id=WP_221068074.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2531295 2533685 . - . ID=gene-VA249_RS11555;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=VA249_RS11555;old_locus_tag=VYA_21970 NZ_AP024165.1 Protein Homology CDS 2531295 2533685 . - 0 ID=cds-WP_221068075.1;Parent=gene-VA249_RS11555;Dbxref=Genbank:WP_221068075.1;Name=WP_221068075.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707552.1;locus_tag=VA249_RS11555;product=penicillin-binding protein 1B;protein_id=WP_221068075.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2533678 2536146 . - . ID=gene-VA249_RS11560;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=VA249_RS11560;old_locus_tag=VYA_21980 NZ_AP024165.1 Protein Homology CDS 2533678 2536146 . - 0 ID=cds-WP_221068076.1;Parent=gene-VA249_RS11560;Dbxref=Genbank:WP_221068076.1;Name=WP_221068076.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841426.1;locus_tag=VA249_RS11560;product=ATP-dependent helicase HrpB;protein_id=WP_221068076.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2536213 2536929 . + . ID=gene-VA249_RS11565;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=VA249_RS11565;old_locus_tag=VYA_21990 NZ_AP024165.1 Protein Homology CDS 2536213 2536929 . + 0 ID=cds-WP_221068077.1;Parent=gene-VA249_RS11565;Dbxref=Genbank:WP_221068077.1;Name=WP_221068077.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707554.1;locus_tag=VA249_RS11565;product=DNA/RNA nuclease SfsA;protein_id=WP_221068077.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2537067 2537513 . + . ID=gene-VA249_RS11570;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=VA249_RS11570;old_locus_tag=VYA_22000 NZ_AP024165.1 Protein Homology CDS 2537067 2537513 . + 0 ID=cds-WP_128810236.1;Parent=gene-VA249_RS11570;Dbxref=Genbank:WP_128810236.1;Name=WP_128810236.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006072667.1;locus_tag=VA249_RS11570;product=RNA polymerase-binding protein DksA;protein_id=WP_128810236.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2537623 2538486 . + . ID=gene-VA249_RS11575;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=VA249_RS11575;old_locus_tag=VYA_22010 NZ_AP024165.1 Protein Homology CDS 2537623 2538486 . + 0 ID=cds-WP_221068078.1;Parent=gene-VA249_RS11575;Dbxref=Genbank:WP_221068078.1;Name=WP_221068078.1;Ontology_term=GO:0043039,GO:0004812;gbkey=CDS;gene=gluQRS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707555.1;locus_tag=VA249_RS11575;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_221068078.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2538588 2539955 . + . ID=gene-VA249_RS11580;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=VA249_RS11580;old_locus_tag=VYA_22020 NZ_AP024165.1 Protein Homology CDS 2538588 2539955 . + 0 ID=cds-WP_221068079.1;Parent=gene-VA249_RS11580;Dbxref=Genbank:WP_221068079.1;Name=WP_221068079.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297242.1;locus_tag=VA249_RS11580;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_221068079.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2539952 2540437 . + . ID=gene-VA249_RS11585;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=VA249_RS11585;old_locus_tag=VYA_22030 NZ_AP024165.1 Protein Homology CDS 2539952 2540437 . + 0 ID=cds-WP_128810233.1;Parent=gene-VA249_RS11585;Dbxref=Genbank:WP_128810233.1;Name=WP_128810233.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232935.1;locus_tag=VA249_RS11585;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_128810233.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2540462 2541256 . + . ID=gene-VA249_RS11590;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=VA249_RS11590;old_locus_tag=VYA_22040 NZ_AP024165.1 Protein Homology CDS 2540462 2541256 . + 0 ID=cds-WP_128810232.1;Parent=gene-VA249_RS11590;Dbxref=Genbank:WP_128810232.1;Name=WP_128810232.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428654.1;locus_tag=VA249_RS11590;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_128810232.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2541268 2542176 . + . ID=gene-VA249_RS11595;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=VA249_RS11595;old_locus_tag=VYA_22050 NZ_AP024165.1 Protein Homology CDS 2541268 2542176 . + 0 ID=cds-WP_211916010.1;Parent=gene-VA249_RS11595;Dbxref=Genbank:WP_211916010.1;Name=WP_211916010.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128863.1;locus_tag=VA249_RS11595;product=pantoate--beta-alanine ligase;protein_id=WP_211916010.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2542304 2543074 . - . ID=gene-VA249_RS11600;Name=VA249_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11600;old_locus_tag=VYA_22060 NZ_AP024165.1 Protein Homology CDS 2542304 2543074 . - 0 ID=cds-WP_128810230.1;Parent=gene-VA249_RS11600;Dbxref=Genbank:WP_128810230.1;Name=WP_128810230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000284378.1;locus_tag=VA249_RS11600;product=ABC transporter permease;protein_id=WP_128810230.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2543074 2543991 . - . ID=gene-VA249_RS11605;Name=VA249_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11605;old_locus_tag=VYA_22070 NZ_AP024165.1 Protein Homology CDS 2543074 2543991 . - 0 ID=cds-WP_221069943.1;Parent=gene-VA249_RS11605;Dbxref=Genbank:WP_221069943.1;Name=WP_221069943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435984.1;locus_tag=VA249_RS11605;product=ABC transporter ATP-binding protein;protein_id=WP_221069943.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2544213 2545883 . - . ID=gene-VA249_RS11610;Name=VA249_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11610;old_locus_tag=VYA_22080 NZ_AP024165.1 Protein Homology CDS 2544213 2545883 . - 0 ID=cds-WP_221068080.1;Parent=gene-VA249_RS11610;Dbxref=Genbank:WP_221068080.1;Name=WP_221068080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196604.1;locus_tag=VA249_RS11610;product=SulP family inorganic anion transporter;protein_id=WP_221068080.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2546158 2546826 . + . ID=gene-VA249_RS11615;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=VA249_RS11615;old_locus_tag=VYA_22090 NZ_AP024165.1 Protein Homology CDS 2546158 2546826 . + 0 ID=cds-WP_221068081.1;Parent=gene-VA249_RS11615;Dbxref=Genbank:WP_221068081.1;Name=WP_221068081.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002051193.1;locus_tag=VA249_RS11615;product=carbonate dehydratase;protein_id=WP_221068081.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2546905 2547435 . - . ID=gene-VA249_RS11620;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=VA249_RS11620;old_locus_tag=VYA_22100 NZ_AP024165.1 Protein Homology CDS 2546905 2547435 . - 0 ID=cds-WP_211916007.1;Parent=gene-VA249_RS11620;Dbxref=Genbank:WP_211916007.1;Name=WP_211916007.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735452.1;locus_tag=VA249_RS11620;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_211916007.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2547759 2548373 . + . ID=gene-VA249_RS11625;Name=VA249_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11625;old_locus_tag=VYA_22110 NZ_AP024165.1 Protein Homology CDS 2547759 2548373 . + 0 ID=cds-WP_128810226.1;Parent=gene-VA249_RS11625;Dbxref=Genbank:WP_128810226.1;Name=WP_128810226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005479697.1;locus_tag=VA249_RS11625;product=LuxR/HapR/OpaR family quorum-sensing transcriptional regulator;protein_id=WP_128810226.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2548538 2549968 . - . ID=gene-VA249_RS11630;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=VA249_RS11630;old_locus_tag=VYA_22120 NZ_AP024165.1 Protein Homology CDS 2548538 2549968 . - 0 ID=cds-WP_211916006.1;Parent=gene-VA249_RS11630;Dbxref=Genbank:WP_211916006.1;Name=WP_211916006.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410063.1;locus_tag=VA249_RS11630;product=dihydrolipoyl dehydrogenase;protein_id=WP_211916006.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2550227 2552152 . - . ID=gene-VA249_RS11635;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=VA249_RS11635;old_locus_tag=VYA_22130 NZ_AP024165.1 Protein Homology CDS 2550227 2552152 . - 0 ID=cds-WP_221068082.1;Parent=gene-VA249_RS11635;Dbxref=Genbank:WP_221068082.1;Name=WP_221068082.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446264.1;locus_tag=VA249_RS11635;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_221068082.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2552183 2554846 . - . ID=gene-VA249_RS11640;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=VA249_RS11640;old_locus_tag=VYA_22140 NZ_AP024165.1 Protein Homology CDS 2552183 2554846 . - 0 ID=cds-WP_221068083.1;Parent=gene-VA249_RS11640;Dbxref=Genbank:WP_221068083.1;Name=WP_221068083.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008222724.1;locus_tag=VA249_RS11640;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_221068083.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2554900 2555667 . - . ID=gene-VA249_RS11645;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=VA249_RS11645;old_locus_tag=VYA_22150 NZ_AP024165.1 Protein Homology CDS 2554900 2555667 . - 0 ID=cds-WP_221068084.1;Parent=gene-VA249_RS11645;Dbxref=Genbank:WP_221068084.1;Name=WP_221068084.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844079.1;locus_tag=VA249_RS11645;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_221068084.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2556063 2556620 . - . ID=gene-VA249_RS11650;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=VA249_RS11650;old_locus_tag=VYA_22160 NZ_AP024165.1 Protein Homology CDS 2556063 2556620 . - 0 ID=cds-WP_221068085.1;Parent=gene-VA249_RS11650;Dbxref=Genbank:WP_221068085.1;Name=WP_221068085.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841421.1;locus_tag=VA249_RS11650;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_221068085.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2556713 2557600 . + . ID=gene-VA249_RS11655;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=VA249_RS11655;old_locus_tag=VYA_22170 NZ_AP024165.1 Protein Homology CDS 2556713 2557600 . + 0 ID=cds-WP_221068086.1;Parent=gene-VA249_RS11655;Dbxref=Genbank:WP_221068086.1;Name=WP_221068086.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635915.1;locus_tag=VA249_RS11655;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_221068086.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2557824 2558276 . + . ID=gene-VA249_RS11660;Name=VA249_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11660;old_locus_tag=VYA_22180 NZ_AP024165.1 Protein Homology CDS 2557824 2558276 . + 0 ID=cds-WP_221068087.1;Parent=gene-VA249_RS11660;Dbxref=Genbank:WP_221068087.1;Name=WP_221068087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649327.1;locus_tag=VA249_RS11660;product=pilin;protein_id=WP_221068087.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2558297 2559982 . + . ID=gene-VA249_RS11665;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=VA249_RS11665;old_locus_tag=VYA_22190 NZ_AP024165.1 Protein Homology CDS 2558297 2559982 . + 0 ID=cds-WP_221068088.1;Parent=gene-VA249_RS11665;Dbxref=Genbank:WP_221068088.1;Name=WP_221068088.1;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446257.1;locus_tag=VA249_RS11665;product=type IV-A pilus assembly ATPase PilB;protein_id=WP_221068088.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2560016 2561239 . + . ID=gene-VA249_RS11670;Name=VA249_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11670;old_locus_tag=VYA_22200 NZ_AP024165.1 Protein Homology CDS 2560016 2561239 . + 0 ID=cds-WP_221068089.1;Parent=gene-VA249_RS11670;Dbxref=Genbank:WP_221068089.1;Name=WP_221068089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743173.1;locus_tag=VA249_RS11670;product=type II secretion system F family protein;protein_id=WP_221068089.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2561304 2562173 . + . ID=gene-VA249_RS11675;Name=VA249_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11675;old_locus_tag=VYA_22210 NZ_AP024165.1 Protein Homology CDS 2561304 2562173 . + 0 ID=cds-WP_221068090.1;Parent=gene-VA249_RS11675;Dbxref=Genbank:WP_221068090.1;Name=WP_221068090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297252.1;locus_tag=VA249_RS11675;product=A24 family peptidase;protein_id=WP_221068090.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2562174 2562788 . + . ID=gene-VA249_RS11680;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=VA249_RS11680;old_locus_tag=VYA_22220 NZ_AP024165.1 Protein Homology CDS 2562174 2562788 . + 0 ID=cds-WP_221068091.1;Parent=gene-VA249_RS11680;Dbxref=Genbank:WP_221068091.1;Name=WP_221068091.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189130.1;locus_tag=VA249_RS11680;product=dephospho-CoA kinase;protein_id=WP_221068091.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2562816 2563556 . + . ID=gene-VA249_RS11685;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=VA249_RS11685;old_locus_tag=VYA_22230 NZ_AP024165.1 Protein Homology CDS 2562816 2563556 . + 0 ID=cds-WP_128810214.1;Parent=gene-VA249_RS11685;Dbxref=Genbank:WP_128810214.1;Name=WP_128810214.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079546.1;locus_tag=VA249_RS11685;product=cell division protein ZapD;protein_id=WP_128810214.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2563620 2563814 . + . ID=gene-VA249_RS11690;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=VA249_RS11690;old_locus_tag=VYA_22240 NZ_AP024165.1 Protein Homology CDS 2563620 2563814 . + 0 ID=cds-WP_211915996.1;Parent=gene-VA249_RS11690;Dbxref=Genbank:WP_211915996.1;Name=WP_211915996.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462546.1;locus_tag=VA249_RS11690;product=DNA gyrase inhibitor YacG;protein_id=WP_211915996.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2564064 2564417 . - . ID=gene-VA249_RS11695;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=VA249_RS11695;old_locus_tag=VYA_22250 NZ_AP024165.1 Protein Homology CDS 2564064 2564417 . - 0 ID=cds-WP_128810212.1;Parent=gene-VA249_RS11695;Dbxref=Genbank:WP_128810212.1;Name=WP_128810212.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017054174.1;locus_tag=VA249_RS11695;product=50S ribosomal protein L19;protein_id=WP_128810212.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2564459 2565202 . - . ID=gene-VA249_RS11700;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=VA249_RS11700;old_locus_tag=VYA_22260 NZ_AP024165.1 Protein Homology CDS 2564459 2565202 . - 0 ID=cds-WP_211915995.1;Parent=gene-VA249_RS11700;Dbxref=Genbank:WP_211915995.1;Name=WP_211915995.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006958144.1;locus_tag=VA249_RS11700;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_211915995.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2565230 2565778 . - . ID=gene-VA249_RS11705;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=VA249_RS11705;old_locus_tag=VYA_22270 NZ_AP024165.1 Protein Homology CDS 2565230 2565778 . - 0 ID=cds-WP_128810210.1;Parent=gene-VA249_RS11705;Dbxref=Genbank:WP_128810210.1;Name=WP_128810210.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462552.1;locus_tag=VA249_RS11705;product=ribosome maturation factor RimM;protein_id=WP_128810210.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2565806 2566054 . - . ID=gene-VA249_RS11710;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=VA249_RS11710;old_locus_tag=VYA_22280 NZ_AP024165.1 Protein Homology CDS 2565806 2566054 . - 0 ID=cds-WP_004410028.1;Parent=gene-VA249_RS11710;Dbxref=Genbank:WP_004410028.1;Name=WP_004410028.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945696.1;locus_tag=VA249_RS11710;product=30S ribosomal protein S16;protein_id=WP_004410028.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2566264 2567643 . - . ID=gene-VA249_RS11715;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=VA249_RS11715;old_locus_tag=VYA_22290 NZ_AP024165.1 Protein Homology CDS 2566264 2567643 . - 0 ID=cds-WP_128810209.1;Parent=gene-VA249_RS11715;Dbxref=Genbank:WP_128810209.1;Name=WP_128810209.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232959.1;locus_tag=VA249_RS11715;product=signal recognition particle protein;protein_id=WP_128810209.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2567857 2568651 . + . ID=gene-VA249_RS11720;Name=VA249_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11720;old_locus_tag=VYA_22300 NZ_AP024165.1 Protein Homology CDS 2567857 2568651 . + 0 ID=cds-WP_128810208.1;Parent=gene-VA249_RS11720;Dbxref=Genbank:WP_128810208.1;Name=WP_128810208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012604751.1;locus_tag=VA249_RS11720;product=inner membrane protein YpjD;protein_id=WP_128810208.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2568896 2570170 . + . ID=gene-VA249_RS11725;Name=VA249_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11725;old_locus_tag=VYA_22310 NZ_AP024165.1 Protein Homology CDS 2568896 2570170 . + 0 ID=cds-WP_221068092.1;Parent=gene-VA249_RS11725;Dbxref=Genbank:WP_221068092.1;Name=WP_221068092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189129.1;locus_tag=VA249_RS11725;product=CNNM domain-containing protein;protein_id=WP_221068092.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2570290 2570808 . - . ID=gene-VA249_RS11730;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=VA249_RS11730;old_locus_tag=VYA_22320 NZ_AP024165.1 Protein Homology CDS 2570290 2570808 . - 0 ID=cds-WP_221068093.1;Parent=gene-VA249_RS11730;Dbxref=Genbank:WP_221068093.1;Name=WP_221068093.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847612.1;locus_tag=VA249_RS11730;product=S-ribosylhomocysteine lyase;protein_id=WP_221068093.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2570898 2571503 . - . ID=gene-VA249_RS11735;Name=VA249_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11735;old_locus_tag=VYA_22330 NZ_AP024165.1 Protein Homology CDS 2570898 2571503 . - 0 ID=cds-WP_211915993.1;Parent=gene-VA249_RS11735;Dbxref=Genbank:WP_211915993.1;Name=WP_211915993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438049.1;locus_tag=VA249_RS11735;product=hypothetical protein;protein_id=WP_211915993.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2571549 2573117 . - . ID=gene-VA249_RS11740;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=VA249_RS11740;old_locus_tag=VYA_22340 NZ_AP024165.1 Protein Homology CDS 2571549 2573117 . - 0 ID=cds-WP_221068094.1;Parent=gene-VA249_RS11740;Dbxref=Genbank:WP_221068094.1;Name=WP_221068094.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379941.1;locus_tag=VA249_RS11740;product=glutamate--cysteine ligase;protein_id=WP_221068094.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2573279 2576119 . - . ID=gene-VA249_RS11745;Name=VA249_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11745;old_locus_tag=VYA_22350 NZ_AP024165.1 Protein Homology CDS 2573279 2576119 . - 0 ID=cds-WP_221068095.1;Parent=gene-VA249_RS11745;Dbxref=Genbank:WP_221068095.1;Name=WP_221068095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128889.1;locus_tag=VA249_RS11745;product=insulinase family protein;protein_id=WP_221068095.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2576129 2576590 . - . ID=gene-VA249_RS11750;Name=VA249_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11750;old_locus_tag=VYA_22360 NZ_AP024165.1 Protein Homology CDS 2576129 2576590 . - 0 ID=cds-WP_221068096.1;Parent=gene-VA249_RS11750;Dbxref=Genbank:WP_221068096.1;Name=WP_221068096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735497.1;locus_tag=VA249_RS11750;product=DedA family protein;protein_id=WP_221068096.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2576584 2577534 . - . ID=gene-VA249_RS11755;Name=VA249_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11755;old_locus_tag=VYA_22370 NZ_AP024165.1 Protein Homology CDS 2576584 2577534 . - 0 ID=cds-WP_221068097.1;Parent=gene-VA249_RS11755;Dbxref=Genbank:WP_221068097.1;Name=WP_221068097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448434.1;locus_tag=VA249_RS11755;product=NADP-dependent oxidoreductase;protein_id=WP_221068097.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2577682 2578812 . - . ID=gene-VA249_RS11760;Name=VA249_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11760;old_locus_tag=VYA_22380 NZ_AP024165.1 Protein Homology CDS 2577682 2578812 . - 0 ID=cds-WP_221068098.1;Parent=gene-VA249_RS11760;Dbxref=Genbank:WP_221068098.1;Name=WP_221068098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232968.1;locus_tag=VA249_RS11760;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_221068098.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2578822 2580615 . - . ID=gene-VA249_RS11765;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=VA249_RS11765;old_locus_tag=VYA_22390 NZ_AP024165.1 Protein Homology CDS 2578822 2580615 . - 0 ID=cds-WP_221068099.1;Parent=gene-VA249_RS11765;Dbxref=Genbank:WP_221068099.1;Name=WP_221068099.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847618.1;locus_tag=VA249_RS11765;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_221068099.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2580649 2580906 . - . ID=gene-VA249_RS11770;Name=VA249_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11770;old_locus_tag=VYA_22400 NZ_AP024165.1 Protein Homology CDS 2580649 2580906 . - 0 ID=cds-WP_221068100.1;Parent=gene-VA249_RS11770;Dbxref=Genbank:WP_221068100.1;Name=WP_221068100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232970.1;locus_tag=VA249_RS11770;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_221068100.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2581418 2582056 . - . ID=gene-VA249_RS11775;Name=VA249_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11775;old_locus_tag=VYA_22410 NZ_AP024165.1 Protein Homology CDS 2581418 2582056 . - 0 ID=cds-WP_221068101.1;Parent=gene-VA249_RS11775;Dbxref=Genbank:WP_221068101.1;Name=WP_221068101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128895.1;locus_tag=VA249_RS11775;product=response regulator transcription factor;protein_id=WP_221068101.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2582623 2583993 . + . ID=gene-VA249_RS11780;Name=VA249_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11780;old_locus_tag=VYA_22420 NZ_AP024165.1 Protein Homology CDS 2582623 2583993 . + 0 ID=cds-WP_221068102.1;Parent=gene-VA249_RS11780;Dbxref=Genbank:WP_221068102.1;Name=WP_221068102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017031130.1;locus_tag=VA249_RS11780;product=dentin sialophosphoprotein;protein_id=WP_221068102.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2584016 2584345 . + . ID=gene-VA249_RS11785;Name=VA249_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11785;old_locus_tag=VYA_22430 NZ_AP024165.1 Protein Homology CDS 2584016 2584345 . + 0 ID=cds-WP_128810198.1;Parent=gene-VA249_RS11785;Dbxref=Genbank:WP_128810198.1;Name=WP_128810198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534085.1;locus_tag=VA249_RS11785;product=carbon storage regulator;protein_id=WP_128810198.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2584351 2585040 . + . ID=gene-VA249_RS11790;Name=VA249_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11790;old_locus_tag=VYA_22440 NZ_AP024165.1 Protein Homology CDS 2584351 2585040 . + 0 ID=cds-WP_221068103.1;Parent=gene-VA249_RS11790;Dbxref=Genbank:WP_221068103.1;Name=WP_221068103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128898.1;locus_tag=VA249_RS11790;product=C39 family peptidase;protein_id=WP_221068103.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2585064 2585630 . + . ID=gene-VA249_RS11795;Name=VA249_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11795;old_locus_tag=VYA_22450 NZ_AP024165.1 Protein Homology CDS 2585064 2585630 . + 0 ID=cds-WP_225923910.1;Parent=gene-VA249_RS11795;Dbxref=Genbank:WP_225923910.1;Name=WP_225923910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534091.1;locus_tag=VA249_RS11795;product=hypothetical protein;protein_id=WP_225923910.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2585877 2586872 . - . ID=gene-VA249_RS11800;Name=VA249_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11800;old_locus_tag=VYA_22460 NZ_AP024165.1 Protein Homology CDS 2585877 2586872 . - 0 ID=cds-WP_221068105.1;Parent=gene-VA249_RS11800;Dbxref=Genbank:WP_221068105.1;Name=WP_221068105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128900.1;locus_tag=VA249_RS11800;product=transporter;protein_id=WP_221068105.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2587145 2587221 . - . ID=gene-VA249_RS11805;Name=VA249_RS11805;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11805;old_locus_tag=VYA_t00570 NZ_AP024165.1 tRNAscan-SE tRNA 2587145 2587221 . - . ID=rna-VA249_RS11805;Parent=gene-VA249_RS11805;anticodon=(pos:complement(2587185..2587187));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11805;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2587145 2587221 . - . ID=exon-VA249_RS11805-1;Parent=rna-VA249_RS11805;anticodon=(pos:complement(2587185..2587187));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11805;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2587301 2587377 . - . ID=gene-VA249_RS11810;Name=VA249_RS11810;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11810;old_locus_tag=VYA_t00580 NZ_AP024165.1 tRNAscan-SE tRNA 2587301 2587377 . - . ID=rna-VA249_RS11810;Parent=gene-VA249_RS11810;anticodon=(pos:complement(2587341..2587343));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11810;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2587301 2587377 . - . ID=exon-VA249_RS11810-1;Parent=rna-VA249_RS11810;anticodon=(pos:complement(2587341..2587343));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11810;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2587457 2587533 . - . ID=gene-VA249_RS11815;Name=VA249_RS11815;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11815;old_locus_tag=VYA_t00590 NZ_AP024165.1 tRNAscan-SE tRNA 2587457 2587533 . - . ID=rna-VA249_RS11815;Parent=gene-VA249_RS11815;anticodon=(pos:complement(2587497..2587499));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11815;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2587457 2587533 . - . ID=exon-VA249_RS11815-1;Parent=rna-VA249_RS11815;anticodon=(pos:complement(2587497..2587499));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11815;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2587613 2587689 . - . ID=gene-VA249_RS11820;Name=VA249_RS11820;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11820;old_locus_tag=VYA_t00600 NZ_AP024165.1 tRNAscan-SE tRNA 2587613 2587689 . - . ID=rna-VA249_RS11820;Parent=gene-VA249_RS11820;anticodon=(pos:complement(2587653..2587655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11820;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2587613 2587689 . - . ID=exon-VA249_RS11820-1;Parent=rna-VA249_RS11820;anticodon=(pos:complement(2587653..2587655));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11820;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2587769 2587845 . - . ID=gene-VA249_RS11825;Name=VA249_RS11825;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11825;old_locus_tag=VYA_t00610 NZ_AP024165.1 tRNAscan-SE tRNA 2587769 2587845 . - . ID=rna-VA249_RS11825;Parent=gene-VA249_RS11825;anticodon=(pos:complement(2587809..2587811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11825;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2587769 2587845 . - . ID=exon-VA249_RS11825-1;Parent=rna-VA249_RS11825;anticodon=(pos:complement(2587809..2587811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11825;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2587925 2588001 . - . ID=gene-VA249_RS11830;Name=VA249_RS11830;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11830;old_locus_tag=VYA_t00620 NZ_AP024165.1 tRNAscan-SE tRNA 2587925 2588001 . - . ID=rna-VA249_RS11830;Parent=gene-VA249_RS11830;anticodon=(pos:complement(2587965..2587967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11830;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2587925 2588001 . - . ID=exon-VA249_RS11830-1;Parent=rna-VA249_RS11830;anticodon=(pos:complement(2587965..2587967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11830;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2588060 2588136 . - . ID=gene-VA249_RS11835;Name=VA249_RS11835;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11835;old_locus_tag=VYA_t00630 NZ_AP024165.1 tRNAscan-SE tRNA 2588060 2588136 . - . ID=rna-VA249_RS11835;Parent=gene-VA249_RS11835;anticodon=(pos:complement(2588100..2588102));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11835;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2588060 2588136 . - . ID=exon-VA249_RS11835-1;Parent=rna-VA249_RS11835;anticodon=(pos:complement(2588100..2588102));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11835;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2588223 2588314 . - . ID=gene-VA249_RS11840;Name=VA249_RS11840;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11840;old_locus_tag=VYA_t00640 NZ_AP024165.1 tRNAscan-SE tRNA 2588223 2588314 . - . ID=rna-VA249_RS11840;Parent=gene-VA249_RS11840;anticodon=(pos:complement(2588278..2588280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11840;product=tRNA-Ser NZ_AP024165.1 tRNAscan-SE exon 2588223 2588314 . - . ID=exon-VA249_RS11840-1;Parent=rna-VA249_RS11840;anticodon=(pos:complement(2588278..2588280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11840;product=tRNA-Ser NZ_AP024165.1 RefSeq gene 2588344 2588420 . - . ID=gene-VA249_RS11845;Name=VA249_RS11845;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11845;old_locus_tag=VYA_t00650 NZ_AP024165.1 tRNAscan-SE tRNA 2588344 2588420 . - . ID=rna-VA249_RS11845;Parent=gene-VA249_RS11845;anticodon=(pos:complement(2588384..2588386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11845;product=tRNA-Arg NZ_AP024165.1 tRNAscan-SE exon 2588344 2588420 . - . ID=exon-VA249_RS11845-1;Parent=rna-VA249_RS11845;anticodon=(pos:complement(2588384..2588386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11845;product=tRNA-Arg NZ_AP024165.1 RefSeq gene 2588457 2588548 . - . ID=gene-VA249_RS11850;Name=VA249_RS11850;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS11850;old_locus_tag=VYA_t00660 NZ_AP024165.1 tRNAscan-SE tRNA 2588457 2588548 . - . ID=rna-VA249_RS11850;Parent=gene-VA249_RS11850;anticodon=(pos:complement(2588512..2588514));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11850;product=tRNA-Ser NZ_AP024165.1 tRNAscan-SE exon 2588457 2588548 . - . ID=exon-VA249_RS11850-1;Parent=rna-VA249_RS11850;anticodon=(pos:complement(2588512..2588514));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS11850;product=tRNA-Ser NZ_AP024165.1 RefSeq gene 2588932 2589129 . - . ID=gene-VA249_RS11855;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=VA249_RS11855;old_locus_tag=VYA_22470 NZ_AP024165.1 Protein Homology CDS 2588932 2589129 . - 0 ID=cds-WP_004415691.1;Parent=gene-VA249_RS11855;Dbxref=Genbank:WP_004415691.1;Name=WP_004415691.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011219641.1;locus_tag=VA249_RS11855;product=carbon storage regulator CsrA;protein_id=WP_004415691.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2589222 2590409 . - . ID=gene-VA249_RS11860;Name=VA249_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11860;old_locus_tag=VYA_22480 NZ_AP024165.1 Protein Homology CDS 2589222 2590409 . - 0 ID=cds-WP_221068106.1;Parent=gene-VA249_RS11860;Dbxref=Genbank:WP_221068106.1;Name=WP_221068106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196183.1;locus_tag=VA249_RS11860;product=aspartate kinase;protein_id=WP_221068106.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2590609 2593206 . - . ID=gene-VA249_RS11865;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=VA249_RS11865;old_locus_tag=VYA_22490 NZ_AP024165.1 Protein Homology CDS 2590609 2593206 . - 0 ID=cds-WP_221068107.1;Parent=gene-VA249_RS11865;Dbxref=Genbank:WP_221068107.1;Name=WP_221068107.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017059024.1;locus_tag=VA249_RS11865;product=alanine--tRNA ligase;protein_id=WP_221068107.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2593349 2593816 . - . ID=gene-VA249_RS11870;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=VA249_RS11870;old_locus_tag=VYA_22500 NZ_AP024165.1 Protein Homology CDS 2593349 2593816 . - 0 ID=cds-WP_221068108.1;Parent=gene-VA249_RS11870;Dbxref=Genbank:WP_221068108.1;Name=WP_221068108.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005383799.1;locus_tag=VA249_RS11870;product=recombination regulator RecX;protein_id=WP_221068108.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2594024 2595064 . - . ID=gene-VA249_RS11875;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=VA249_RS11875;old_locus_tag=VYA_22510 NZ_AP024165.1 Protein Homology CDS 2594024 2595064 . - 0 ID=cds-WP_221068109.1;Parent=gene-VA249_RS11875;Dbxref=Genbank:WP_221068109.1;Name=WP_221068109.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478550.1;locus_tag=VA249_RS11875;product=recombinase RecA;protein_id=WP_221068109.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2595265 2595747 . - . ID=gene-VA249_RS11880;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=VA249_RS11880;old_locus_tag=VYA_22520 NZ_AP024165.1 Protein Homology CDS 2595265 2595747 . - 0 ID=cds-WP_221068110.1;Parent=gene-VA249_RS11880;Dbxref=Genbank:WP_221068110.1;Name=WP_221068110.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425360.1;locus_tag=VA249_RS11880;product=nicotinamide-nucleotide amidase;protein_id=WP_221068110.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2595832 2598393 . + . ID=gene-VA249_RS11885;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=VA249_RS11885;old_locus_tag=VYA_22530 NZ_AP024165.1 Protein Homology CDS 2595832 2598393 . + 0 ID=cds-WP_221068111.1;Parent=gene-VA249_RS11885;Dbxref=Genbank:WP_221068111.1;Name=WP_221068111.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478546.1;locus_tag=VA249_RS11885;product=DNA mismatch repair protein MutS;protein_id=WP_221068111.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2598503 2599489 . - . ID=gene-VA249_RS11890;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=VA249_RS11890;old_locus_tag=VYA_22540 NZ_AP024165.1 Protein Homology CDS 2598503 2599489 . - 0 ID=cds-WP_221068112.1;Parent=gene-VA249_RS11890;Dbxref=Genbank:WP_221068112.1;Name=WP_221068112.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232977.1;locus_tag=VA249_RS11890;product=RNA polymerase sigma factor RpoS;protein_id=WP_221068112.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2599570 2600493 . - . ID=gene-VA249_RS11895;Name=VA249_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11895;old_locus_tag=VYA_22550 NZ_AP024165.1 Protein Homology CDS 2599570 2600493 . - 0 ID=cds-WP_221068113.1;Parent=gene-VA249_RS11895;Dbxref=Genbank:WP_221068113.1;Name=WP_221068113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196178.1;locus_tag=VA249_RS11895;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_221068113.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2600508 2601134 . - . ID=gene-VA249_RS11900;Name=VA249_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11900;old_locus_tag=VYA_22560 NZ_AP024165.1 Protein Homology CDS 2600508 2601134 . - 0 ID=cds-WP_221068114.1;Parent=gene-VA249_RS11900;Dbxref=Genbank:WP_221068114.1;Name=WP_221068114.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079519.1;locus_tag=VA249_RS11900;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_221068114.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2601134 2601910 . - . ID=gene-VA249_RS11905;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=VA249_RS11905;old_locus_tag=VYA_22570 NZ_AP024165.1 Protein Homology CDS 2601134 2601910 . - 0 ID=cds-WP_221068115.1;Parent=gene-VA249_RS11905;Dbxref=Genbank:WP_221068115.1;Name=WP_221068115.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455564.1;locus_tag=VA249_RS11905;product=5'/3'-nucleotidase SurE;protein_id=WP_221068115.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2601910 2602953 . - . ID=gene-VA249_RS11910;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=VA249_RS11910;old_locus_tag=VYA_22580 NZ_AP024165.1 Protein Homology CDS 2601910 2602953 . - 0 ID=cds-WP_221068116.1;Parent=gene-VA249_RS11910;Dbxref=Genbank:WP_221068116.1;Name=WP_221068116.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014232981.1;locus_tag=VA249_RS11910;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_221068116.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2603000 2603476 . - . ID=gene-VA249_RS11915;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=VA249_RS11915;old_locus_tag=VYA_22590 NZ_AP024165.1 Protein Homology CDS 2603000 2603476 . - 0 ID=cds-WP_025622860.1;Parent=gene-VA249_RS11915;Dbxref=Genbank:WP_025622860.1;Name=WP_025622860.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005380896.1;locus_tag=VA249_RS11915;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_025622860.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2603491 2604198 . - . ID=gene-VA249_RS11920;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=VA249_RS11920;old_locus_tag=VYA_22600 NZ_AP024165.1 Protein Homology CDS 2603491 2604198 . - 0 ID=cds-WP_221068117.1;Parent=gene-VA249_RS11920;Dbxref=Genbank:WP_221068117.1;Name=WP_221068117.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698770.1;locus_tag=VA249_RS11920;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_221068117.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2604203 2604481 . - . ID=gene-VA249_RS11925;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=VA249_RS11925;old_locus_tag=VYA_22610 NZ_AP024165.1 Protein Homology CDS 2604203 2604481 . - 0 ID=cds-WP_128810181.1;Parent=gene-VA249_RS11925;Dbxref=Genbank:WP_128810181.1;Name=WP_128810181.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843617.1;locus_tag=VA249_RS11925;product=cell division protein FtsB;protein_id=WP_128810181.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2604826 2606127 . - . ID=gene-VA249_RS11930;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=VA249_RS11930;old_locus_tag=VYA_22620 NZ_AP024165.1 Protein Homology CDS 2604826 2606127 . - 0 ID=cds-WP_211915973.1;Parent=gene-VA249_RS11930;Dbxref=Genbank:WP_211915973.1;Name=WP_211915973.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016960285.1;locus_tag=VA249_RS11930;product=phosphopyruvate hydratase;protein_id=WP_211915973.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2606209 2607849 . - . ID=gene-VA249_RS11935;Name=VA249_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11935;old_locus_tag=VYA_22630 NZ_AP024165.1 Protein Homology CDS 2606209 2607849 . - 0 ID=cds-WP_221068118.1;Parent=gene-VA249_RS11935;Dbxref=Genbank:WP_221068118.1;Name=WP_221068118.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843614.1;locus_tag=VA249_RS11935;product=CTP synthase;protein_id=WP_221068118.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2608007 2608798 . - . ID=gene-VA249_RS11940;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=VA249_RS11940;old_locus_tag=VYA_22640 NZ_AP024165.1 Protein Homology CDS 2608007 2608798 . - 0 ID=cds-WP_221068119.1;Parent=gene-VA249_RS11940;Dbxref=Genbank:WP_221068119.1;Name=WP_221068119.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005493929.1;locus_tag=VA249_RS11940;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_221068119.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2609012 2611231 . - . ID=gene-VA249_RS11945;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=VA249_RS11945;old_locus_tag=VYA_22650 NZ_AP024165.1 Protein Homology CDS 2609012 2611231 . - 0 ID=cds-WP_221068120.1;Parent=gene-VA249_RS11945;Dbxref=Genbank:WP_221068120.1;Name=WP_221068120.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522603.1;locus_tag=VA249_RS11945;product=GTP diphosphokinase;protein_id=WP_221068120.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2611356 2612675 . - . ID=gene-VA249_RS11950;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=VA249_RS11950;old_locus_tag=VYA_22660 NZ_AP024165.1 Protein Homology CDS 2611356 2612675 . - 0 ID=cds-WP_221068121.1;Parent=gene-VA249_RS11950;Dbxref=Genbank:WP_221068121.1;Name=WP_221068121.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189117.1;locus_tag=VA249_RS11950;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_221068121.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2612866 2615661 . + . ID=gene-VA249_RS11955;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=VA249_RS11955;old_locus_tag=VYA_22670 NZ_AP024165.1 Protein Homology CDS 2612866 2615661 . + 0 ID=cds-WP_221068122.1;Parent=gene-VA249_RS11955;Dbxref=Genbank:WP_221068122.1;Name=WP_221068122.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016021;gbkey=CDS;gene=barA;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707599.1;locus_tag=VA249_RS11955;product=two-component sensor histidine kinase BarA;protein_id=WP_221068122.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2615750 2616130 . - . ID=gene-VA249_RS11960;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=VA249_RS11960;old_locus_tag=VYA_22680 NZ_AP024165.1 Protein Homology CDS 2615750 2616130 . - 0 ID=cds-WP_221068123.1;Parent=gene-VA249_RS11960;Dbxref=Genbank:WP_221068123.1;Name=WP_221068123.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012128917.1;locus_tag=VA249_RS11960;product=holo-ACP synthase;protein_id=WP_221068123.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2616143 2616874 . - . ID=gene-VA249_RS11965;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=VA249_RS11965;old_locus_tag=VYA_22690 NZ_AP024165.1 Protein Homology CDS 2616143 2616874 . - 0 ID=cds-WP_128810175.1;Parent=gene-VA249_RS11965;Dbxref=Genbank:WP_128810175.1;Name=WP_128810175.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079503.1;locus_tag=VA249_RS11965;product=pyridoxine 5'-phosphate synthase;protein_id=WP_128810175.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2616871 2617602 . - . ID=gene-VA249_RS11970;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=VA249_RS11970;old_locus_tag=VYA_22700 NZ_AP024165.1 Protein Homology CDS 2616871 2617602 . - 0 ID=cds-WP_221068124.1;Parent=gene-VA249_RS11970;Dbxref=Genbank:WP_221068124.1;Name=WP_221068124.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843607.1;locus_tag=VA249_RS11970;product=DNA repair protein RecO;protein_id=WP_221068124.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2617733 2618695 . - . ID=gene-VA249_RS11975;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=VA249_RS11975;old_locus_tag=VYA_22710 NZ_AP024165.1 Protein Homology CDS 2617733 2618695 . - 0 ID=cds-WP_128810173.1;Parent=gene-VA249_RS11975;Dbxref=Genbank:WP_128810173.1;Name=WP_128810173.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449795.1;locus_tag=VA249_RS11975;product=GTPase Era;protein_id=WP_128810173.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2618688 2619365 . - . ID=gene-VA249_RS11980;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=VA249_RS11980;old_locus_tag=VYA_22720 NZ_AP024165.1 Protein Homology CDS 2618688 2619365 . - 0 ID=cds-WP_128810172.1;Parent=gene-VA249_RS11980;Dbxref=Genbank:WP_128810172.1;Name=WP_128810172.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005593057.1;locus_tag=VA249_RS11980;product=ribonuclease III;protein_id=WP_128810172.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2619386 2620285 . - . ID=gene-VA249_RS11985;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=VA249_RS11985;old_locus_tag=VYA_22730 NZ_AP024165.1 Protein Homology CDS 2619386 2620285 . - 0 ID=cds-WP_211915967.1;Parent=gene-VA249_RS11985;Dbxref=Genbank:WP_211915967.1;Name=WP_211915967.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024072.1;locus_tag=VA249_RS11985;product=signal peptidase I;protein_id=WP_211915967.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2620389 2622182 . - . ID=gene-VA249_RS11990;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=VA249_RS11990;old_locus_tag=VYA_22740 NZ_AP024165.1 Protein Homology CDS 2620389 2622182 . - 0 ID=cds-WP_128810170.1;Parent=gene-VA249_RS11990;Dbxref=Genbank:WP_128810170.1;Name=WP_128810170.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014204436.1;locus_tag=VA249_RS11990;product=translation elongation factor 4;protein_id=WP_128810170.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2622336 2622806 . - . ID=gene-VA249_RS11995;Name=VA249_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS11995;old_locus_tag=VYA_22750 NZ_AP024165.1 Protein Homology CDS 2622336 2622806 . - 0 ID=cds-WP_221068125.1;Parent=gene-VA249_RS11995;Dbxref=Genbank:WP_221068125.1;Name=WP_221068125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005393916.1;locus_tag=VA249_RS11995;product=SoxR reducing system RseC family protein;protein_id=WP_221068125.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2622803 2623768 . - . ID=gene-VA249_RS12000;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=VA249_RS12000;old_locus_tag=VYA_22760 NZ_AP024165.1 Protein Homology CDS 2622803 2623768 . - 0 ID=cds-WP_128810168.1;Parent=gene-VA249_RS12000;Dbxref=Genbank:WP_128810168.1;Name=WP_128810168.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436456.1;locus_tag=VA249_RS12000;product=sigma-E factor regulatory protein RseB;protein_id=WP_128810168.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2623765 2624391 . - . ID=gene-VA249_RS12005;Name=VA249_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12005;old_locus_tag=VYA_22770 NZ_AP024165.1 Protein Homology CDS 2623765 2624391 . - 0 ID=cds-WP_221068126.1;Parent=gene-VA249_RS12005;Dbxref=Genbank:WP_221068126.1;Name=WP_221068126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016798245.1;locus_tag=VA249_RS12005;product=sigma-E factor negative regulatory protein;protein_id=WP_221068126.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2624420 2624998 . - . ID=gene-VA249_RS12010;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=VA249_RS12010;old_locus_tag=VYA_22780 NZ_AP024165.1 Protein Homology CDS 2624420 2624998 . - 0 ID=cds-WP_128810166.1;Parent=gene-VA249_RS12010;Dbxref=Genbank:WP_128810166.1;Name=WP_128810166.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005593048.1;locus_tag=VA249_RS12010;product=RNA polymerase sigma factor RpoE;protein_id=WP_128810166.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2625556 2627163 . + . ID=gene-VA249_RS12015;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=VA249_RS12015;old_locus_tag=VYA_22790 NZ_AP024165.1 Protein Homology CDS 2625556 2627163 . + 0 ID=cds-WP_221068127.1;Parent=gene-VA249_RS12015;Dbxref=Genbank:WP_221068127.1;Name=WP_221068127.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531639.1;locus_tag=VA249_RS12015;product=L-aspartate oxidase;protein_id=WP_221068127.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2627581 2627841 . - . ID=gene-VA249_RS12020;Name=VA249_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12020;old_locus_tag=VYA_22800 NZ_AP024165.1 Protein Homology CDS 2627581 2627841 . - 0 ID=cds-WP_128810164.1;Parent=gene-VA249_RS12020;Dbxref=Genbank:WP_128810164.1;Name=WP_128810164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017789849.1;locus_tag=VA249_RS12020;product=succinate dehydrogenase assembly factor 2;protein_id=WP_128810164.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2628077 2629045 . + . ID=gene-VA249_RS12025;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=VA249_RS12025;old_locus_tag=VYA_22810 NZ_AP024165.1 Protein Homology CDS 2628077 2629045 . + 0 ID=cds-WP_221068128.1;Parent=gene-VA249_RS12025;Dbxref=Genbank:WP_221068128.1;Name=WP_221068128.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001914042.1;locus_tag=VA249_RS12025;product=tRNA-modifying protein YgfZ;protein_id=WP_221068128.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2629038 2629511 . + . ID=gene-VA249_RS12030;Name=VA249_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12030;old_locus_tag=VYA_22820 NZ_AP024165.1 Protein Homology CDS 2629038 2629511 . + 0 ID=cds-WP_128810163.1;Parent=gene-VA249_RS12030;Dbxref=Genbank:WP_128810163.1;Name=WP_128810163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449773.1;locus_tag=VA249_RS12030;product=YbaK/EbsC family protein;protein_id=WP_128810163.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2630132 2630338 . + . ID=gene-VA249_RS12035;Name=VA249_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12035;old_locus_tag=VYA_22830 NZ_AP024165.1 Protein Homology CDS 2630132 2630338 . + 0 ID=cds-WP_005449772.1;Parent=gene-VA249_RS12035;Dbxref=Genbank:WP_005449772.1;Name=WP_005449772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235991.1;locus_tag=VA249_RS12035;product=DUF1107 domain-containing protein;protein_id=WP_005449772.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2630418 2631626 . - . ID=gene-VA249_RS12040;Name=VA249_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12040;old_locus_tag=VYA_22840 NZ_AP024165.1 Protein Homology CDS 2630418 2631626 . - 0 ID=cds-WP_221068129.1;Parent=gene-VA249_RS12040;Dbxref=Genbank:WP_221068129.1;Name=WP_221068129.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429932.1;locus_tag=VA249_RS12040;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_221068129.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2631655 2632833 . - . ID=gene-VA249_RS12045;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=VA249_RS12045;old_locus_tag=VYA_22850 NZ_AP024165.1 Protein Homology CDS 2631655 2632833 . - 0 ID=cds-WP_221068130.1;Parent=gene-VA249_RS12045;Dbxref=Genbank:WP_221068130.1;Name=WP_221068130.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017066017.1;locus_tag=VA249_RS12045;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_221068130.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2632875 2633453 . - . ID=gene-VA249_RS12050;Name=VA249_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12050;old_locus_tag=VYA_22860 NZ_AP024165.1 Protein Homology CDS 2632875 2633453 . - 0 ID=cds-WP_128810160.1;Parent=gene-VA249_RS12050;Dbxref=Genbank:WP_128810160.1;Name=WP_128810160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196164.1;locus_tag=VA249_RS12050;product=YecA family protein;protein_id=WP_128810160.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2633702 2634010 . + . ID=gene-VA249_RS12055;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=VA249_RS12055;old_locus_tag=VYA_22870 NZ_AP024165.1 Protein Homology CDS 2633702 2634010 . + 0 ID=cds-WP_128810159.1;Parent=gene-VA249_RS12055;Dbxref=Genbank:WP_128810159.1;Name=WP_128810159.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735366.1;locus_tag=VA249_RS12055;product=cell division protein ZapA;protein_id=WP_128810159.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2634019 2634203 . + . ID=gene-VA249_RS12060;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=VA249_RS12060 NZ_AP024165.1 cmsearch ncRNA 2634019 2634203 . + . ID=rna-VA249_RS12060;Parent=gene-VA249_RS12060;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12060;product=6S RNA NZ_AP024165.1 cmsearch exon 2634019 2634203 . + . ID=exon-VA249_RS12060-1;Parent=rna-VA249_RS12060;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12060;product=6S RNA NZ_AP024165.1 RefSeq gene 2634208 2634807 . + . ID=gene-VA249_RS12065;Name=VA249_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12065;old_locus_tag=VYA_22880 NZ_AP024165.1 Protein Homology CDS 2634208 2634807 . + 0 ID=cds-WP_221068131.1;Parent=gene-VA249_RS12065;Dbxref=Genbank:WP_221068131.1;Name=WP_221068131.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633556.1;locus_tag=VA249_RS12065;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_221068131.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2634860 2635516 . + . ID=gene-VA249_RS12070;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=VA249_RS12070;old_locus_tag=VYA_22890 NZ_AP024165.1 Protein Homology CDS 2634860 2635516 . + 0 ID=cds-WP_211915959.1;Parent=gene-VA249_RS12070;Dbxref=Genbank:WP_211915959.1;Name=WP_211915959.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012604797.1;locus_tag=VA249_RS12070;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_211915959.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2635774 2637003 . + . ID=gene-VA249_RS12075;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=VA249_RS12075;old_locus_tag=VYA_22900 NZ_AP024165.1 Protein Homology CDS 2635774 2637003 . + 0 ID=cds-WP_221068132.1;Parent=gene-VA249_RS12075;Dbxref=Genbank:WP_221068132.1;Name=WP_221068132.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008073471.1;locus_tag=VA249_RS12075;product=phosphoglycerate dehydrogenase;protein_id=WP_221068132.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2637115 2637810 . - . ID=gene-VA249_RS12080;Name=VA249_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12080;old_locus_tag=VYA_22910 NZ_AP024165.1 Protein Homology CDS 2637115 2637810 . - 0 ID=cds-WP_221068133.1;Parent=gene-VA249_RS12080;Dbxref=Genbank:WP_221068133.1;Name=WP_221068133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429927.1;locus_tag=VA249_RS12080;product=oxidative stress defense protein;protein_id=WP_221068133.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2638013 2638909 . - . ID=gene-VA249_RS12085;Name=VA249_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12085;old_locus_tag=VYA_22920 NZ_AP024165.1 Protein Homology CDS 2638013 2638909 . - 0 ID=cds-WP_221068134.1;Parent=gene-VA249_RS12085;Dbxref=Genbank:WP_221068134.1;Name=WP_221068134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707613.1;locus_tag=VA249_RS12085;product=LysR family transcriptional regulator ArgP;protein_id=WP_221068134.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2639064 2639693 . + . ID=gene-VA249_RS12090;Name=VA249_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12090;old_locus_tag=VYA_22930 NZ_AP024165.1 Protein Homology CDS 2639064 2639693 . + 0 ID=cds-WP_128810153.1;Parent=gene-VA249_RS12090;Dbxref=Genbank:WP_128810153.1;Name=WP_128810153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005493896.1;locus_tag=VA249_RS12090;product=LysE/ArgO family amino acid transporter;protein_id=WP_128810153.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2639714 2640196 . + . ID=gene-VA249_RS12095;Name=VA249_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12095;old_locus_tag=VYA_22940 NZ_AP024165.1 Protein Homology CDS 2639714 2640196 . + 0 ID=cds-WP_221069945.1;Parent=gene-VA249_RS12095;Dbxref=Genbank:WP_221069945.1;Name=WP_221069945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698786.1;locus_tag=VA249_RS12095;product=YbaK/EbsC family protein;protein_id=WP_221069945.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2640245 2641111 . - . ID=gene-VA249_RS12100;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=VA249_RS12100;old_locus_tag=VYA_22950 NZ_AP024165.1 Protein Homology CDS 2640245 2641111 . - 0 ID=cds-WP_128810152.1;Parent=gene-VA249_RS12100;Dbxref=Genbank:WP_128810152.1;Name=WP_128810152.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006879849.1;locus_tag=VA249_RS12100;product=small-conductance mechanosensitive channel MscS;protein_id=WP_128810152.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2641605 2642681 . - . ID=gene-VA249_RS12105;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=VA249_RS12105;old_locus_tag=VYA_22960 NZ_AP024165.1 Protein Homology CDS 2641605 2642681 . - 0 ID=cds-WP_221068135.1;Parent=gene-VA249_RS12105;Dbxref=Genbank:WP_221068135.1;Name=WP_221068135.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034369.1;locus_tag=VA249_RS12105;product=class II fructose-bisphosphate aldolase;protein_id=WP_221068135.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2642834 2643997 . - . ID=gene-VA249_RS12110;Name=VA249_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12110;old_locus_tag=VYA_22970 NZ_AP024165.1 Protein Homology CDS 2642834 2643997 . - 0 ID=cds-WP_221068136.1;Parent=gene-VA249_RS12110;Dbxref=Genbank:WP_221068136.1;Name=WP_221068136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000111274.1;locus_tag=VA249_RS12110;product=phosphoglycerate kinase;protein_id=WP_221068136.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2644151 2645203 . - . ID=gene-VA249_RS12115;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=VA249_RS12115;old_locus_tag=VYA_22980 NZ_AP024165.1 Protein Homology CDS 2644151 2645203 . - 0 ID=cds-WP_211915954.1;Parent=gene-VA249_RS12115;Dbxref=Genbank:WP_211915954.1;Name=WP_211915954.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005393950.1;locus_tag=VA249_RS12115;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_211915954.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2645403 2645639 . + . ID=gene-VA249_RS12120;Name=VA249_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12120;old_locus_tag=VYA_22990 NZ_AP024165.1 Protein Homology CDS 2645403 2645639 . + 0 ID=cds-WP_221068137.1;Parent=gene-VA249_RS12120;Dbxref=Genbank:WP_221068137.1;Name=WP_221068137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534899.1;locus_tag=VA249_RS12120;product=hypothetical protein;protein_id=WP_221068137.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2645690 2647684 . - . ID=gene-VA249_RS12125;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=VA249_RS12125;old_locus_tag=VYA_23000 NZ_AP024165.1 Protein Homology CDS 2645690 2647684 . - 0 ID=cds-WP_221068138.1;Parent=gene-VA249_RS12125;Dbxref=Genbank:WP_221068138.1;Name=WP_221068138.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297289.1;locus_tag=VA249_RS12125;product=transketolase;protein_id=WP_221068138.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2647683 2647877 . + . ID=gene-VA249_RS12130;Name=VA249_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12130 NZ_AP024165.1 GeneMarkS-2+ CDS 2647683 2647877 . + 0 ID=cds-WP_128810147.1;Parent=gene-VA249_RS12130;Dbxref=Genbank:WP_128810147.1;Name=WP_128810147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS12130;product=hypothetical protein;protein_id=WP_128810147.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2648052 2649206 . + . ID=gene-VA249_RS12135;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=VA249_RS12135;old_locus_tag=VYA_23010 NZ_AP024165.1 Protein Homology CDS 2648052 2649206 . + 0 ID=cds-WP_128810146.1;Parent=gene-VA249_RS12135;Dbxref=Genbank:WP_128810146.1;Name=WP_128810146.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075413.1;locus_tag=VA249_RS12135;product=methionine adenosyltransferase;protein_id=WP_128810146.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2649491 2650288 . + . ID=gene-VA249_RS12140;Name=VA249_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12140;old_locus_tag=VYA_23020 NZ_AP024165.1 Protein Homology CDS 2649491 2650288 . + 0 ID=cds-WP_221068139.1;Parent=gene-VA249_RS12140;Dbxref=Genbank:WP_221068139.1;Name=WP_221068139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197217.1;locus_tag=VA249_RS12140;product=DUF2189 domain-containing protein;protein_id=WP_221068139.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2650355 2650852 . + . ID=gene-VA249_RS12145;Name=VA249_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12145;old_locus_tag=VYA_23030 NZ_AP024165.1 Protein Homology CDS 2650355 2650852 . + 0 ID=cds-WP_221068140.1;Parent=gene-VA249_RS12145;Dbxref=Genbank:WP_221068140.1;Name=WP_221068140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450338.1;locus_tag=VA249_RS12145;product=SprT family zinc-dependent metalloprotease;protein_id=WP_221068140.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2651107 2651802 . + . ID=gene-VA249_RS12150;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=VA249_RS12150;old_locus_tag=VYA_23050 NZ_AP024165.1 Protein Homology CDS 2651107 2651802 . + 0 ID=cds-WP_221068141.1;Parent=gene-VA249_RS12150;Dbxref=Genbank:WP_221068141.1;Name=WP_221068141.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189098.1;locus_tag=VA249_RS12150;product=deoxyribonuclease I;protein_id=WP_221068141.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2651938 2652669 . + . ID=gene-VA249_RS12155;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=VA249_RS12155;old_locus_tag=VYA_23060 NZ_AP024165.1 Protein Homology CDS 2651938 2652669 . + 0 ID=cds-WP_221069946.1;Parent=gene-VA249_RS12155;Dbxref=Genbank:WP_221069946.1;Name=WP_221069946.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001888153.1;locus_tag=VA249_RS12155;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_221069946.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2652684 2653634 . + . ID=gene-VA249_RS12160;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=VA249_RS12160;old_locus_tag=VYA_23070 NZ_AP024165.1 Protein Homology CDS 2652684 2653634 . + 0 ID=cds-WP_221068142.1;Parent=gene-VA249_RS12160;Dbxref=Genbank:WP_221068142.1;Name=WP_221068142.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005482451.1;locus_tag=VA249_RS12160;product=glutathione synthase;protein_id=WP_221068142.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2653774 2654337 . + . ID=gene-VA249_RS12165;Name=VA249_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12165;old_locus_tag=VYA_23080 NZ_AP024165.1 Protein Homology CDS 2653774 2654337 . + 0 ID=cds-WP_221068143.1;Parent=gene-VA249_RS12165;Dbxref=Genbank:WP_221068143.1;Name=WP_221068143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079465.1;locus_tag=VA249_RS12165;product=YqgE/AlgH family protein;protein_id=WP_221068143.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2654368 2654793 . + . ID=gene-VA249_RS12170;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=VA249_RS12170;old_locus_tag=VYA_23090 NZ_AP024165.1 Protein Homology CDS 2654368 2654793 . + 0 ID=cds-WP_221068144.1;Parent=gene-VA249_RS12170;Dbxref=Genbank:WP_221068144.1;Name=WP_221068144.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005381017.1;locus_tag=VA249_RS12170;product=Holliday junction resolvase RuvX;protein_id=WP_221068144.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2654879 2655985 . - . ID=gene-VA249_RS12175;Name=VA249_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12175;old_locus_tag=VYA_23100 NZ_AP024165.1 Protein Homology CDS 2654879 2655985 . - 0 ID=cds-WP_221068145.1;Parent=gene-VA249_RS12175;Dbxref=Genbank:WP_221068145.1;Name=WP_221068145.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017045509.1;locus_tag=VA249_RS12175;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_221068145.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2656013 2657053 . - . ID=gene-VA249_RS12180;Name=VA249_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12180;old_locus_tag=VYA_23110 NZ_AP024165.1 Protein Homology CDS 2656013 2657053 . - 0 ID=cds-WP_128810138.1;Parent=gene-VA249_RS12180;Dbxref=Genbank:WP_128810138.1;Name=WP_128810138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534915.1;locus_tag=VA249_RS12180;product=type IV pilus twitching motility protein PilT;protein_id=WP_128810138.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2657082 2657792 . + . ID=gene-VA249_RS12185;Name=VA249_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12185;old_locus_tag=VYA_23120 NZ_AP024165.1 Protein Homology CDS 2657082 2657792 . + 0 ID=cds-WP_221068146.1;Parent=gene-VA249_RS12185;Dbxref=Genbank:WP_221068146.1;Name=WP_221068146.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233033.1;locus_tag=VA249_RS12185;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_221068146.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2657967 2658785 . + . ID=gene-VA249_RS12190;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=VA249_RS12190;old_locus_tag=VYA_23130 NZ_AP024165.1 Protein Homology CDS 2657967 2658785 . + 0 ID=cds-WP_221068147.1;Parent=gene-VA249_RS12190;Dbxref=Genbank:WP_221068147.1;Name=WP_221068147.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017629547.1;locus_tag=VA249_RS12190;product=pyrroline-5-carboxylate reductase;protein_id=WP_221068147.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2658838 2659395 . + . ID=gene-VA249_RS12195;Name=VA249_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12195;old_locus_tag=VYA_23140 NZ_AP024165.1 Protein Homology CDS 2658838 2659395 . + 0 ID=cds-WP_221068148.1;Parent=gene-VA249_RS12195;Dbxref=Genbank:WP_221068148.1;Name=WP_221068148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087264.1;locus_tag=VA249_RS12195;product=YggT family protein;protein_id=WP_221068148.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2659395 2659685 . + . ID=gene-VA249_RS12200;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=VA249_RS12200;old_locus_tag=VYA_23150 NZ_AP024165.1 Protein Homology CDS 2659395 2659685 . + 0 ID=cds-WP_221068149.1;Parent=gene-VA249_RS12200;Dbxref=Genbank:WP_221068149.1;Name=WP_221068149.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650282.1;locus_tag=VA249_RS12200;product=DUF167 family protein YggU;protein_id=WP_221068149.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2659749 2660180 . + . ID=gene-VA249_RS12205;Name=VA249_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12205;old_locus_tag=VYA_23160 NZ_AP024165.1 Protein Homology CDS 2659749 2660180 . + 0 ID=cds-WP_211915945.1;Parent=gene-VA249_RS12205;Dbxref=Genbank:WP_211915945.1;Name=WP_211915945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449681.1;locus_tag=VA249_RS12205;product=DUF4426 domain-containing protein;protein_id=WP_211915945.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2660275 2660877 . + . ID=gene-VA249_RS12210;Name=VA249_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12210;old_locus_tag=VYA_23170 NZ_AP024165.1 Protein Homology CDS 2660275 2660877 . + 0 ID=cds-WP_221068150.1;Parent=gene-VA249_RS12210;Dbxref=Genbank:WP_221068150.1;Name=WP_221068150.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697579.1;locus_tag=VA249_RS12210;product=XTP/dITP diphosphatase;protein_id=WP_221068150.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2660911 2662083 . + . ID=gene-VA249_RS12215;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=VA249_RS12215;old_locus_tag=VYA_23180 NZ_AP024165.1 Protein Homology CDS 2660911 2662083 . + 0 ID=cds-WP_221068151.1;Parent=gene-VA249_RS12215;Dbxref=Genbank:WP_221068151.1;Name=WP_221068151.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425802.1;locus_tag=VA249_RS12215;product=radical SAM family heme chaperone HemW;protein_id=WP_221068151.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2662207 2663127 . - . ID=gene-VA249_RS12220;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=VA249_RS12220;old_locus_tag=VYA_23190 NZ_AP024165.1 Protein Homology CDS 2662207 2663127 . - 0 ID=cds-WP_211915942.1;Parent=gene-VA249_RS12220;Dbxref=Genbank:WP_211915942.1;Name=WP_211915942.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002046360.1;locus_tag=VA249_RS12220;product=glutaminase B;protein_id=WP_211915942.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2663229 2664257 . - . ID=gene-VA249_RS12225;Name=VA249_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12225;old_locus_tag=VYA_23200 NZ_AP024165.1 Protein Homology CDS 2663229 2664257 . - 0 ID=cds-WP_221068152.1;Parent=gene-VA249_RS12225;Dbxref=Genbank:WP_221068152.1;Name=WP_221068152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534930.1;locus_tag=VA249_RS12225;product=DNA methylase;protein_id=WP_221068152.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2664276 2664995 . - . ID=gene-VA249_RS12230;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=VA249_RS12230;old_locus_tag=VYA_23210 NZ_AP024165.1 Protein Homology CDS 2664276 2664995 . - 0 ID=cds-WP_128810128.1;Parent=gene-VA249_RS12230;Dbxref=Genbank:WP_128810128.1;Name=WP_128810128.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006711920.1;locus_tag=VA249_RS12230;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_128810128.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2665199 2666275 . + . ID=gene-VA249_RS12235;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=VA249_RS12235;old_locus_tag=VYA_23220 NZ_AP024165.1 Protein Homology CDS 2665199 2666275 . + 0 ID=cds-WP_221068153.1;Parent=gene-VA249_RS12235;Dbxref=Genbank:WP_221068153.1;Name=WP_221068153.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821893.1;locus_tag=VA249_RS12235;product=A/G-specific adenine glycosylase;protein_id=WP_221068153.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2666295 2666567 . + . ID=gene-VA249_RS12240;Name=VA249_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12240;old_locus_tag=VYA_23230 NZ_AP024165.1 Protein Homology CDS 2666295 2666567 . + 0 ID=cds-WP_128810126.1;Parent=gene-VA249_RS12240;Dbxref=Genbank:WP_128810126.1;Name=WP_128810126.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005482430.1;locus_tag=VA249_RS12240;product=oxidative damage protection protein;protein_id=WP_128810126.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2666650 2667789 . + . ID=gene-VA249_RS12245;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=VA249_RS12245;old_locus_tag=VYA_23240 NZ_AP024165.1 Protein Homology CDS 2666650 2667789 . + 0 ID=cds-WP_221068154.1;Parent=gene-VA249_RS12245;Dbxref=Genbank:WP_221068154.1;Name=WP_221068154.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697576.1;locus_tag=VA249_RS12245;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_221068154.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2667890 2667965 . + . ID=gene-VA249_RS12250;Name=VA249_RS12250;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12250;old_locus_tag=VYA_t00670 NZ_AP024165.1 tRNAscan-SE tRNA 2667890 2667965 . + . ID=rna-VA249_RS12250;Parent=gene-VA249_RS12250;anticodon=(pos:2667923..2667925);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12250;product=tRNA-Phe NZ_AP024165.1 tRNAscan-SE exon 2667890 2667965 . + . ID=exon-VA249_RS12250-1;Parent=rna-VA249_RS12250;anticodon=(pos:2667923..2667925);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12250;product=tRNA-Phe NZ_AP024165.1 RefSeq gene 2668022 2668097 . + . ID=gene-VA249_RS12255;Name=VA249_RS12255;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12255;old_locus_tag=VYA_t00680 NZ_AP024165.1 tRNAscan-SE tRNA 2668022 2668097 . + . ID=rna-VA249_RS12255;Parent=gene-VA249_RS12255;anticodon=(pos:2668055..2668057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12255;product=tRNA-Thr NZ_AP024165.1 tRNAscan-SE exon 2668022 2668097 . + . ID=exon-VA249_RS12255-1;Parent=rna-VA249_RS12255;anticodon=(pos:2668055..2668057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12255;product=tRNA-Thr NZ_AP024165.1 RefSeq gene 2668105 2668180 . + . ID=gene-VA249_RS12260;Name=VA249_RS12260;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12260;old_locus_tag=VYA_t00690 NZ_AP024165.1 tRNAscan-SE tRNA 2668105 2668180 . + . ID=rna-VA249_RS12260;Parent=gene-VA249_RS12260;anticodon=(pos:2668138..2668140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12260;product=tRNA-Phe NZ_AP024165.1 tRNAscan-SE exon 2668105 2668180 . + . ID=exon-VA249_RS12260-1;Parent=rna-VA249_RS12260;anticodon=(pos:2668138..2668140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12260;product=tRNA-Phe NZ_AP024165.1 RefSeq gene 2668223 2668298 . + . ID=gene-VA249_RS12265;Name=VA249_RS12265;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12265;old_locus_tag=VYA_t00700 NZ_AP024165.1 tRNAscan-SE tRNA 2668223 2668298 . + . ID=rna-VA249_RS12265;Parent=gene-VA249_RS12265;anticodon=(pos:2668256..2668258);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12265;product=tRNA-Asn NZ_AP024165.1 tRNAscan-SE exon 2668223 2668298 . + . ID=exon-VA249_RS12265-1;Parent=rna-VA249_RS12265;anticodon=(pos:2668256..2668258);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12265;product=tRNA-Asn NZ_AP024165.1 RefSeq gene 2668388 2668463 . + . ID=gene-VA249_RS12270;Name=VA249_RS12270;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12270;old_locus_tag=VYA_t00710 NZ_AP024165.1 tRNAscan-SE tRNA 2668388 2668463 . + . ID=rna-VA249_RS12270;Parent=gene-VA249_RS12270;anticodon=(pos:2668421..2668423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12270;product=tRNA-Thr NZ_AP024165.1 tRNAscan-SE exon 2668388 2668463 . + . ID=exon-VA249_RS12270-1;Parent=rna-VA249_RS12270;anticodon=(pos:2668421..2668423);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12270;product=tRNA-Thr NZ_AP024165.1 RefSeq gene 2668471 2668546 . + . ID=gene-VA249_RS12275;Name=VA249_RS12275;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12275;old_locus_tag=VYA_t00720 NZ_AP024165.1 tRNAscan-SE tRNA 2668471 2668546 . + . ID=rna-VA249_RS12275;Parent=gene-VA249_RS12275;anticodon=(pos:2668504..2668506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12275;product=tRNA-Phe NZ_AP024165.1 tRNAscan-SE exon 2668471 2668546 . + . ID=exon-VA249_RS12275-1;Parent=rna-VA249_RS12275;anticodon=(pos:2668504..2668506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12275;product=tRNA-Phe NZ_AP024165.1 RefSeq gene 2668601 2668676 . + . ID=gene-VA249_RS12280;Name=VA249_RS12280;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12280;old_locus_tag=VYA_t00730 NZ_AP024165.1 tRNAscan-SE tRNA 2668601 2668676 . + . ID=rna-VA249_RS12280;Parent=gene-VA249_RS12280;anticodon=(pos:2668634..2668636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12280;product=tRNA-Asn NZ_AP024165.1 tRNAscan-SE exon 2668601 2668676 . + . ID=exon-VA249_RS12280-1;Parent=rna-VA249_RS12280;anticodon=(pos:2668634..2668636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12280;product=tRNA-Asn NZ_AP024165.1 RefSeq gene 2668931 2670556 . + . ID=gene-VA249_RS12285;Name=VA249_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12285;old_locus_tag=VYA_23250 NZ_AP024165.1 Protein Homology CDS 2668931 2670556 . + 0 ID=cds-WP_221068155.1;Parent=gene-VA249_RS12285;Dbxref=Genbank:WP_221068155.1;Name=WP_221068155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384495.1;locus_tag=VA249_RS12285;product=methyl-accepting chemotaxis protein;protein_id=WP_221068155.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2670792 2670867 . + . ID=gene-VA249_RS12290;Name=VA249_RS12290;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12290;old_locus_tag=VYA_t00740 NZ_AP024165.1 tRNAscan-SE tRNA 2670792 2670867 . + . ID=rna-VA249_RS12290;Parent=gene-VA249_RS12290;anticodon=(pos:2670825..2670827);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12290;product=tRNA-Phe NZ_AP024165.1 tRNAscan-SE exon 2670792 2670867 . + . ID=exon-VA249_RS12290-1;Parent=rna-VA249_RS12290;anticodon=(pos:2670825..2670827);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12290;product=tRNA-Phe NZ_AP024165.1 RefSeq gene 2670919 2670994 . + . ID=gene-VA249_RS12295;Name=VA249_RS12295;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12295;old_locus_tag=VYA_t00750 NZ_AP024165.1 tRNAscan-SE tRNA 2670919 2670994 . + . ID=rna-VA249_RS12295;Parent=gene-VA249_RS12295;anticodon=(pos:2670952..2670954);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12295;product=tRNA-Thr NZ_AP024165.1 tRNAscan-SE exon 2670919 2670994 . + . ID=exon-VA249_RS12295-1;Parent=rna-VA249_RS12295;anticodon=(pos:2670952..2670954);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12295;product=tRNA-Thr NZ_AP024165.1 RefSeq gene 2671054 2671129 . + . ID=gene-VA249_RS12300;Name=VA249_RS12300;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12300;old_locus_tag=VYA_t00760 NZ_AP024165.1 tRNAscan-SE tRNA 2671054 2671129 . + . ID=rna-VA249_RS12300;Parent=gene-VA249_RS12300;anticodon=(pos:2671087..2671089);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12300;product=tRNA-Asn NZ_AP024165.1 tRNAscan-SE exon 2671054 2671129 . + . ID=exon-VA249_RS12300-1;Parent=rna-VA249_RS12300;anticodon=(pos:2671087..2671089);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12300;product=tRNA-Asn NZ_AP024165.1 RefSeq gene 2671166 2671241 . + . ID=gene-VA249_RS12305;Name=VA249_RS12305;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12305;old_locus_tag=VYA_t00770 NZ_AP024165.1 tRNAscan-SE tRNA 2671166 2671241 . + . ID=rna-VA249_RS12305;Parent=gene-VA249_RS12305;anticodon=(pos:2671199..2671201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12305;product=tRNA-Thr NZ_AP024165.1 tRNAscan-SE exon 2671166 2671241 . + . ID=exon-VA249_RS12305-1;Parent=rna-VA249_RS12305;anticodon=(pos:2671199..2671201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12305;product=tRNA-Thr NZ_AP024165.1 RefSeq gene 2671301 2671376 . + . ID=gene-VA249_RS12310;Name=VA249_RS12310;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12310;old_locus_tag=VYA_t00780 NZ_AP024165.1 tRNAscan-SE tRNA 2671301 2671376 . + . ID=rna-VA249_RS12310;Parent=gene-VA249_RS12310;anticodon=(pos:2671334..2671336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12310;product=tRNA-Asn NZ_AP024165.1 tRNAscan-SE exon 2671301 2671376 . + . ID=exon-VA249_RS12310-1;Parent=rna-VA249_RS12310;anticodon=(pos:2671334..2671336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12310;product=tRNA-Asn NZ_AP024165.1 RefSeq gene 2671562 2672998 . - . ID=gene-VA249_RS12315;Name=VA249_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12315;old_locus_tag=VYA_23260 NZ_AP024165.1 Protein Homology CDS 2671562 2672998 . - 0 ID=cds-WP_221068156.1;Parent=gene-VA249_RS12315;Dbxref=Genbank:WP_221068156.1;Name=WP_221068156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817589.1;locus_tag=VA249_RS12315;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_221068156.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2673380 2673456 . - . ID=gene-VA249_RS12320;Name=VA249_RS12320;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12320;old_locus_tag=VYA_t00790 NZ_AP024165.1 tRNAscan-SE tRNA 2673380 2673456 . - . ID=rna-VA249_RS12320;Parent=gene-VA249_RS12320;anticodon=(pos:complement(2673420..2673422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12320;product=tRNA-Asp NZ_AP024165.1 tRNAscan-SE exon 2673380 2673456 . - . ID=exon-VA249_RS12320-1;Parent=rna-VA249_RS12320;anticodon=(pos:complement(2673420..2673422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12320;product=tRNA-Asp NZ_AP024165.1 RefSeq gene 2673488 2673604 . - . ID=gene-VA249_RS12325;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS12325;old_locus_tag=VYA_r00070 NZ_AP024165.1 cmsearch rRNA 2673488 2673604 . - . ID=rna-VA249_RS12325;Parent=gene-VA249_RS12325;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12325;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2673488 2673604 . - . ID=exon-VA249_RS12325-1;Parent=rna-VA249_RS12325;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12325;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2673623 2673698 . - . ID=gene-VA249_RS12330;Name=VA249_RS12330;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12330;old_locus_tag=VYA_t00800 NZ_AP024165.1 tRNAscan-SE tRNA 2673623 2673698 . - . ID=rna-VA249_RS12330;Parent=gene-VA249_RS12330;anticodon=(pos:complement(2673663..2673665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12330;product=tRNA-Thr NZ_AP024165.1 tRNAscan-SE exon 2673623 2673698 . - . ID=exon-VA249_RS12330-1;Parent=rna-VA249_RS12330;anticodon=(pos:complement(2673663..2673665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12330;product=tRNA-Thr NZ_AP024165.1 RefSeq gene 2673757 2673873 . - . ID=gene-VA249_RS12335;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS12335;old_locus_tag=VYA_r00080 NZ_AP024165.1 cmsearch rRNA 2673757 2673873 . - . ID=rna-VA249_RS12335;Parent=gene-VA249_RS12335;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12335;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2673757 2673873 . - . ID=exon-VA249_RS12335-1;Parent=rna-VA249_RS12335;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12335;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2673965 2676857 . - . ID=gene-VA249_RS12340;Name=VA249_RS12340;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12340;old_locus_tag=VYA_r00090 NZ_AP024165.1 cmsearch rRNA 2673965 2676857 . - . ID=rna-VA249_RS12340;Parent=gene-VA249_RS12340;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12340;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 2673965 2676857 . - . ID=exon-VA249_RS12340-1;Parent=rna-VA249_RS12340;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12340;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 2677221 2678775 . - . ID=gene-VA249_RS12345;Name=VA249_RS12345;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12345;old_locus_tag=VYA_r00100 NZ_AP024165.1 cmsearch rRNA 2677221 2678775 . - . ID=rna-VA249_RS12345;Parent=gene-VA249_RS12345;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12345;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 2677221 2678775 . - . ID=exon-VA249_RS12345-1;Parent=rna-VA249_RS12345;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12345;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 2679279 2680529 . - . ID=gene-VA249_RS12350;Name=VA249_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12350;old_locus_tag=VYA_23270 NZ_AP024165.1 Protein Homology CDS 2679279 2680529 . - 0 ID=cds-WP_221068157.1;Parent=gene-VA249_RS12350;Dbxref=Genbank:WP_221068157.1;Name=WP_221068157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448792.1;locus_tag=VA249_RS12350;product=HD-GYP domain-containing protein;protein_id=WP_221068157.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2680754 2682289 . - . ID=gene-VA249_RS12355;Name=VA249_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12355;old_locus_tag=VYA_23280 NZ_AP024165.1 Protein Homology CDS 2680754 2682289 . - 0 ID=cds-WP_221068158.1;Parent=gene-VA249_RS12355;Dbxref=Genbank:WP_221068158.1;Name=WP_221068158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230963.1;locus_tag=VA249_RS12355;product=bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein;protein_id=WP_221068158.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2682489 2684210 . + . ID=gene-VA249_RS12360;Name=VA249_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12360;old_locus_tag=VYA_23290 NZ_AP024165.1 Protein Homology CDS 2682489 2684210 . + 0 ID=cds-WP_221068159.1;Parent=gene-VA249_RS12360;Dbxref=Genbank:WP_221068159.1;Name=WP_221068159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024120.2;locus_tag=VA249_RS12360;product=DUF4955 domain-containing protein;protein_id=WP_221068159.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2684302 2684598 . - . ID=gene-VA249_RS12365;Name=VA249_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12365;old_locus_tag=VYA_23300 NZ_AP024165.1 GeneMarkS-2+ CDS 2684302 2684598 . - 0 ID=cds-WP_221068160.1;Parent=gene-VA249_RS12365;Dbxref=Genbank:WP_221068160.1;Name=WP_221068160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS12365;product=hypothetical protein;protein_id=WP_221068160.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2684735 2684819 . - . ID=gene-VA249_RS12370;Name=VA249_RS12370;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12370;old_locus_tag=VYA_t00810 NZ_AP024165.1 tRNAscan-SE tRNA 2684735 2684819 . - . ID=rna-VA249_RS12370;Parent=gene-VA249_RS12370;anticodon=(pos:complement(2684783..2684785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12370;product=tRNA-Leu NZ_AP024165.1 tRNAscan-SE exon 2684735 2684819 . - . ID=exon-VA249_RS12370-1;Parent=rna-VA249_RS12370;anticodon=(pos:complement(2684783..2684785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12370;product=tRNA-Leu NZ_AP024165.1 RefSeq gene 2685100 2685579 . + . ID=gene-VA249_RS12375;Name=VA249_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12375;old_locus_tag=VYA_23310 NZ_AP024165.1 Protein Homology CDS 2685100 2685579 . + 0 ID=cds-WP_128810108.1;Parent=gene-VA249_RS12375;Dbxref=Genbank:WP_128810108.1;Name=WP_128810108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297306.1;locus_tag=VA249_RS12375;product=RDD family protein;protein_id=WP_128810108.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2685656 2686726 . - . ID=gene-VA249_RS12380;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=VA249_RS12380;old_locus_tag=VYA_23320 NZ_AP024165.1 Protein Homology CDS 2685656 2686726 . - 0 ID=cds-WP_221068161.1;Parent=gene-VA249_RS12380;Dbxref=Genbank:WP_221068161.1;Name=WP_221068161.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002032946.1;locus_tag=VA249_RS12380;product=LPS export ABC transporter permease LptG;protein_id=WP_221068161.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2686730 2687830 . - . ID=gene-VA249_RS12385;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=VA249_RS12385;old_locus_tag=VYA_23330 NZ_AP024165.1 Protein Homology CDS 2686730 2687830 . - 0 ID=cds-WP_221068162.1;Parent=gene-VA249_RS12385;Dbxref=Genbank:WP_221068162.1;Name=WP_221068162.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397457.1;locus_tag=VA249_RS12385;product=LPS export ABC transporter permease LptF;protein_id=WP_221068162.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2688030 2689538 . + . ID=gene-VA249_RS12390;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=VA249_RS12390;old_locus_tag=VYA_23340 NZ_AP024165.1 Protein Homology CDS 2688030 2689538 . + 0 ID=cds-WP_128810106.1;Parent=gene-VA249_RS12390;Dbxref=Genbank:WP_128810106.1;Name=WP_128810106.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000397170.1;locus_tag=VA249_RS12390;product=leucyl aminopeptidase;protein_id=WP_128810106.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2689654 2690103 . + . ID=gene-VA249_RS12395;Name=VA249_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12395;old_locus_tag=VYA_23350 NZ_AP024165.1 Protein Homology CDS 2689654 2690103 . + 0 ID=cds-WP_221069948.1;Parent=gene-VA249_RS12395;Dbxref=Genbank:WP_221069948.1;Name=WP_221069948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004738668.1;locus_tag=VA249_RS12395;product=DNA polymerase III subunit chi;protein_id=WP_221069948.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2690200 2693055 . + . ID=gene-VA249_RS12400;Name=VA249_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12400;old_locus_tag=VYA_23360 NZ_AP024165.1 Protein Homology CDS 2690200 2693055 . + 0 ID=cds-WP_221068163.1;Parent=gene-VA249_RS12400;Dbxref=Genbank:WP_221068163.1;Name=WP_221068163.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416454.1;locus_tag=VA249_RS12400;product=valine--tRNA ligase;protein_id=WP_221068163.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2693282 2693680 . + . ID=gene-VA249_RS12405;Name=VA249_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12405;old_locus_tag=VYA_23370 NZ_AP024165.1 Protein Homology CDS 2693282 2693680 . + 0 ID=cds-WP_005441986.1;Parent=gene-VA249_RS12405;Dbxref=Genbank:WP_005441986.1;Name=WP_005441986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017096065.1;locus_tag=VA249_RS12405;product=DUF2061 domain-containing protein;protein_id=WP_005441986.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2693729 2694223 . + . ID=gene-VA249_RS12410;Name=VA249_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12410;old_locus_tag=VYA_23380 NZ_AP024165.1 Protein Homology CDS 2693729 2694223 . + 0 ID=cds-WP_221068164.1;Parent=gene-VA249_RS12410;Dbxref=Genbank:WP_221068164.1;Name=WP_221068164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233058.1;locus_tag=VA249_RS12410;product=GNAT family N-acetyltransferase;protein_id=WP_221068164.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2694240 2695040 . - . ID=gene-VA249_RS12415;Name=VA249_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12415;old_locus_tag=VYA_23390 NZ_AP024165.1 Protein Homology CDS 2694240 2695040 . - 0 ID=cds-WP_221068165.1;Parent=gene-VA249_RS12415;Dbxref=Genbank:WP_221068165.1;Name=WP_221068165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441995.1;locus_tag=VA249_RS12415;product=hypothetical protein;protein_id=WP_221068165.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2695190 2695606 . - . ID=gene-VA249_RS12420;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=VA249_RS12420;old_locus_tag=VYA_23400 NZ_AP024165.1 Protein Homology CDS 2695190 2695606 . - 0 ID=cds-WP_128810101.1;Parent=gene-VA249_RS12420;Dbxref=Genbank:WP_128810101.1;Name=WP_128810101.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844305.1;locus_tag=VA249_RS12420;product=ribonuclease E inhibitor RraB;protein_id=WP_128810101.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2696192 2697412 . + . ID=gene-VA249_RS12425;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=VA249_RS12425;old_locus_tag=VYA_23410 NZ_AP024165.1 Protein Homology CDS 2696192 2697412 . + 0 ID=cds-WP_211915919.1;Parent=gene-VA249_RS12425;Dbxref=Genbank:WP_211915919.1;Name=WP_211915919.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151227.1;locus_tag=VA249_RS12425;product=arginine deiminase;protein_id=WP_211915919.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2697569 2698573 . + . ID=gene-VA249_RS12430;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=VA249_RS12430;old_locus_tag=VYA_23420 NZ_AP024165.1 Protein Homology CDS 2697569 2698573 . + 0 ID=cds-WP_128810099.1;Parent=gene-VA249_RS12430;Dbxref=Genbank:WP_128810099.1;Name=WP_128810099.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004747254.1;locus_tag=VA249_RS12430;product=ornithine carbamoyltransferase;protein_id=WP_128810099.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2698664 2698759 . + . ID=gene-VA249_RS12435;Name=VA249_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12435 NZ_AP024165.1 Protein Homology CDS 2698664 2698759 . + 0 ID=cds-WP_225923909.1;Parent=gene-VA249_RS12435;Dbxref=Genbank:WP_225923909.1;Name=WP_225923909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844362.1;locus_tag=VA249_RS12435;product=aspartate carbamoyltransferase;protein_id=WP_225923909.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2698850 2699779 . + . ID=gene-VA249_RS12440;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=VA249_RS12440;old_locus_tag=VYA_23430 NZ_AP024165.1 Protein Homology CDS 2698850 2699779 . + 0 ID=cds-WP_211915917.1;Parent=gene-VA249_RS12440;Dbxref=Genbank:WP_211915917.1;Name=WP_211915917.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021017973.1;locus_tag=VA249_RS12440;product=aspartate carbamoyltransferase;protein_id=WP_211915917.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2699797 2700258 . + . ID=gene-VA249_RS12445;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=VA249_RS12445;old_locus_tag=VYA_23440 NZ_AP024165.1 Protein Homology CDS 2699797 2700258 . + 0 ID=cds-WP_128810096.1;Parent=gene-VA249_RS12445;Dbxref=Genbank:WP_128810096.1;Name=WP_128810096.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079421.1;locus_tag=VA249_RS12445;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_128810096.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2700394 2700783 . + . ID=gene-VA249_RS12450;Name=VA249_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12450;old_locus_tag=VYA_23450 NZ_AP024165.1 Protein Homology CDS 2700394 2700783 . + 0 ID=cds-WP_211915915.1;Parent=gene-VA249_RS12450;Dbxref=Genbank:WP_211915915.1;Name=WP_211915915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233065.1;locus_tag=VA249_RS12450;product=RidA family protein;protein_id=WP_211915915.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2700923 2701648 . - . ID=gene-VA249_RS12455;Name=VA249_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12455;old_locus_tag=VYA_23460 NZ_AP024165.1 Protein Homology CDS 2700923 2701648 . - 0 ID=cds-WP_221068166.1;Parent=gene-VA249_RS12455;Dbxref=Genbank:WP_221068166.1;Name=WP_221068166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233066.1;locus_tag=VA249_RS12455;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_221068166.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2701791 2703056 . - . ID=gene-VA249_RS12460;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=VA249_RS12460;old_locus_tag=VYA_23470 NZ_AP024165.1 Protein Homology CDS 2701791 2703056 . - 0 ID=cds-WP_221068167.1;Parent=gene-VA249_RS12460;Dbxref=Genbank:WP_221068167.1;Name=WP_221068167.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017037379.1;locus_tag=VA249_RS12460;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_221068167.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2703066 2703320 . - . ID=gene-VA249_RS12465;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=VA249_RS12465;old_locus_tag=VYA_23480 NZ_AP024165.1 Protein Homology CDS 2703066 2703320 . - 0 ID=cds-WP_005432865.1;Parent=gene-VA249_RS12465;Dbxref=Genbank:WP_005432865.1;Name=WP_005432865.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376480.1;locus_tag=VA249_RS12465;product=BolA family iron metabolism protein IbaG;protein_id=WP_005432865.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2703324 2703644 . - . ID=gene-VA249_RS12470;Name=VA249_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12470;old_locus_tag=VYA_23490 NZ_AP024165.1 Protein Homology CDS 2703324 2703644 . - 0 ID=cds-WP_221068168.1;Parent=gene-VA249_RS12470;Dbxref=Genbank:WP_221068168.1;Name=WP_221068168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396231.1;locus_tag=VA249_RS12470;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_221068168.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2703644 2704282 . - . ID=gene-VA249_RS12475;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=VA249_RS12475;old_locus_tag=VYA_23500 NZ_AP024165.1 Protein Homology CDS 2703644 2704282 . - 0 ID=cds-WP_221068169.1;Parent=gene-VA249_RS12475;Dbxref=Genbank:WP_221068169.1;Name=WP_221068169.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698803.1;locus_tag=VA249_RS12475;product=phospholipid-binding protein MlaC;protein_id=WP_221068169.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2704286 2704774 . - . ID=gene-VA249_RS12480;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=VA249_RS12480;old_locus_tag=VYA_23510 NZ_AP024165.1 Protein Homology CDS 2704286 2704774 . - 0 ID=cds-WP_128810090.1;Parent=gene-VA249_RS12480;Dbxref=Genbank:WP_128810090.1;Name=WP_128810090.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010318826.1;locus_tag=VA249_RS12480;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_128810090.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2704777 2705568 . - . ID=gene-VA249_RS12485;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=VA249_RS12485;old_locus_tag=VYA_23520 NZ_AP024165.1 Protein Homology CDS 2704777 2705568 . - 0 ID=cds-WP_128810089.1;Parent=gene-VA249_RS12485;Dbxref=Genbank:WP_128810089.1;Name=WP_128810089.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396234.1;locus_tag=VA249_RS12485;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_128810089.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2705558 2706361 . - . ID=gene-VA249_RS12490;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=VA249_RS12490;old_locus_tag=VYA_23530 NZ_AP024165.1 Protein Homology CDS 2705558 2706361 . - 0 ID=cds-WP_211915910.1;Parent=gene-VA249_RS12490;Dbxref=Genbank:WP_211915910.1;Name=WP_211915910.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083184.1;locus_tag=VA249_RS12490;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_211915910.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2706760 2707725 . + . ID=gene-VA249_RS12495;Name=VA249_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12495;old_locus_tag=VYA_23540 NZ_AP024165.1 Protein Homology CDS 2706760 2707725 . + 0 ID=cds-WP_221068170.1;Parent=gene-VA249_RS12495;Dbxref=Genbank:WP_221068170.1;Name=WP_221068170.1;Ontology_term=GO:0098662,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008220425.1;locus_tag=VA249_RS12495;product=calcium/sodium antiporter;protein_id=WP_221068170.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2707763 2708734 . + . ID=gene-VA249_RS12500;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=VA249_RS12500;old_locus_tag=VYA_23550 NZ_AP024165.1 Protein Homology CDS 2707763 2708734 . + 0 ID=cds-WP_221068171.1;Parent=gene-VA249_RS12500;Dbxref=Genbank:WP_221068171.1;Name=WP_221068171.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017080888.1;locus_tag=VA249_RS12500;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_221068171.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2708834 2709397 . + . ID=gene-VA249_RS12505;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=VA249_RS12505;old_locus_tag=VYA_23560 NZ_AP024165.1 Protein Homology CDS 2708834 2709397 . + 0 ID=cds-WP_221068172.1;Parent=gene-VA249_RS12505;Dbxref=Genbank:WP_221068172.1;Name=WP_221068172.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233076.1;locus_tag=VA249_RS12505;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_221068172.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2709378 2709872 . + . ID=gene-VA249_RS12510;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=VA249_RS12510;old_locus_tag=VYA_23570 NZ_AP024165.1 Protein Homology CDS 2709378 2709872 . + 0 ID=cds-WP_221068173.1;Parent=gene-VA249_RS12510;Dbxref=Genbank:WP_221068173.1;Name=WP_221068173.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010648092.1;locus_tag=VA249_RS12510;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_221068173.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2709874 2710599 . + . ID=gene-VA249_RS12515;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=VA249_RS12515;old_locus_tag=VYA_23580 NZ_AP024165.1 Protein Homology CDS 2709874 2710599 . + 0 ID=cds-WP_128810083.1;Parent=gene-VA249_RS12515;Dbxref=Genbank:WP_128810083.1;Name=WP_128810083.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004748600.1;locus_tag=VA249_RS12515;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_128810083.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2710650 2712116 . + . ID=gene-VA249_RS12520;Name=VA249_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12520;old_locus_tag=VYA_23590 NZ_AP024165.1 Protein Homology CDS 2710650 2712116 . + 0 ID=cds-WP_221068174.1;Parent=gene-VA249_RS12520;Dbxref=Genbank:WP_221068174.1;Name=WP_221068174.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016793856.1;locus_tag=VA249_RS12520;product=RNA polymerase factor sigma-54;protein_id=WP_221068174.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2712141 2712428 . + . ID=gene-VA249_RS12525;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=VA249_RS12525;old_locus_tag=VYA_23600 NZ_AP024165.1 Protein Homology CDS 2712141 2712428 . + 0 ID=cds-WP_128810081.1;Parent=gene-VA249_RS12525;Dbxref=Genbank:WP_128810081.1;Name=WP_128810081.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166645.1;locus_tag=VA249_RS12525;product=ribosome hibernation promoting factor;protein_id=WP_128810081.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2712431 2712877 . + . ID=gene-VA249_RS12530;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=VA249_RS12530;old_locus_tag=VYA_23610 NZ_AP024165.1 Protein Homology CDS 2712431 2712877 . + 0 ID=cds-WP_128810080.1;Parent=gene-VA249_RS12530;Dbxref=Genbank:WP_128810080.1;Name=WP_128810080.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;gene=ptsN;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450439.1;locus_tag=VA249_RS12530;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_128810080.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2712892 2713755 . + . ID=gene-VA249_RS12535;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=VA249_RS12535;old_locus_tag=VYA_23620 NZ_AP024165.1 Protein Homology CDS 2712892 2713755 . + 0 ID=cds-WP_128810079.1;Parent=gene-VA249_RS12535;Dbxref=Genbank:WP_128810079.1;Name=WP_128810079.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011078773.1;locus_tag=VA249_RS12535;product=RNase adapter RapZ;protein_id=WP_128810079.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2713758 2714033 . + . ID=gene-VA249_RS12540;Name=VA249_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12540;old_locus_tag=VYA_23630 NZ_AP024165.1 Protein Homology CDS 2713758 2714033 . + 0 ID=cds-WP_128810078.1;Parent=gene-VA249_RS12540;Dbxref=Genbank:WP_128810078.1;Name=WP_128810078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008220439.1;locus_tag=VA249_RS12540;product=HPr family phosphocarrier protein;protein_id=WP_128810078.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2714200 2715555 . + . ID=gene-VA249_RS12545;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=VA249_RS12545;old_locus_tag=VYA_23640 NZ_AP024165.1 Protein Homology CDS 2714200 2715555 . + 0 ID=cds-WP_128810077.1;Parent=gene-VA249_RS12545;Dbxref=Genbank:WP_128810077.1;Name=WP_128810077.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444378.1;locus_tag=VA249_RS12545;product=magnesium transporter;protein_id=WP_128810077.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2715664 2717007 . - . ID=gene-VA249_RS12550;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=VA249_RS12550;old_locus_tag=VYA_23650 NZ_AP024165.1 Protein Homology CDS 2715664 2717007 . - 0 ID=cds-WP_221068175.1;Parent=gene-VA249_RS12550;Dbxref=Genbank:WP_221068175.1;Name=WP_221068175.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713633.1;locus_tag=VA249_RS12550;product=metalloprotease PmbA;protein_id=WP_221068175.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2717118 2717645 . + . ID=gene-VA249_RS12555;Name=VA249_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12555;old_locus_tag=VYA_23660 NZ_AP024165.1 Protein Homology CDS 2717118 2717645 . + 0 ID=cds-WP_211915903.1;Parent=gene-VA249_RS12555;Dbxref=Genbank:WP_211915903.1;Name=WP_211915903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008073670.1;locus_tag=VA249_RS12555;product=ribosome-associated protein;protein_id=WP_211915903.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2717721 2718683 . - . ID=gene-VA249_RS12560;Name=VA249_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12560;old_locus_tag=VYA_23670 NZ_AP024165.1 Protein Homology CDS 2717721 2718683 . - 0 ID=cds-WP_221068176.1;Parent=gene-VA249_RS12560;Dbxref=Genbank:WP_221068176.1;Name=WP_221068176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195890.1;locus_tag=VA249_RS12560;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_221068176.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2718720 2719472 . - . ID=gene-VA249_RS12565;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=VA249_RS12565;old_locus_tag=VYA_23680 NZ_AP024165.1 Protein Homology CDS 2718720 2719472 . - 0 ID=cds-WP_221068177.1;Parent=gene-VA249_RS12565;Dbxref=Genbank:WP_221068177.1;Name=WP_221068177.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017420039.1;locus_tag=VA249_RS12565;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_221068177.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2719577 2722486 . - . ID=gene-VA249_RS12570;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=VA249_RS12570;old_locus_tag=VYA_23690 NZ_AP024165.1 Protein Homology CDS 2719577 2722486 . - 0 ID=cds-WP_221068178.1;Parent=gene-VA249_RS12570;Dbxref=Genbank:WP_221068178.1;Name=WP_221068178.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735918.1;locus_tag=VA249_RS12570;product=RNA polymerase-associated protein RapA;protein_id=WP_221068178.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2723033 2724409 . + . ID=gene-VA249_RS12575;Name=VA249_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12575;old_locus_tag=VYA_23700 NZ_AP024165.1 Protein Homology CDS 2723033 2724409 . + 0 ID=cds-WP_128810071.1;Parent=gene-VA249_RS12575;Dbxref=Genbank:WP_128810071.1;Name=WP_128810071.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502897.1;locus_tag=VA249_RS12575;product=PhoH family protein;protein_id=WP_128810071.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2724523 2725968 . - . ID=gene-VA249_RS12580;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=VA249_RS12580;old_locus_tag=VYA_23710 NZ_AP024165.1 Protein Homology CDS 2724523 2725968 . - 0 ID=cds-WP_221068179.1;Parent=gene-VA249_RS12580;Dbxref=Genbank:WP_221068179.1;Name=WP_221068179.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008220563.1;locus_tag=VA249_RS12580;product=metalloprotease TldD;protein_id=WP_221068179.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2725980 2726801 . - . ID=gene-VA249_RS12585;Name=VA249_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12585;old_locus_tag=VYA_23720 NZ_AP024165.1 Protein Homology CDS 2725980 2726801 . - 0 ID=cds-WP_221068180.1;Parent=gene-VA249_RS12585;Dbxref=Genbank:WP_221068180.1;Name=WP_221068180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817390.1;locus_tag=VA249_RS12585;product=carbon-nitrogen hydrolase family protein;protein_id=WP_221068180.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2726845 2730723 . - . ID=gene-VA249_RS12590;Name=VA249_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12590;old_locus_tag=VYA_23730 NZ_AP024165.1 Protein Homology CDS 2726845 2730723 . - 0 ID=cds-WP_221068181.1;Parent=gene-VA249_RS12590;Dbxref=Genbank:WP_221068181.1;Name=WP_221068181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478842.1;locus_tag=VA249_RS12590;product=TIGR02099 family protein;protein_id=WP_221068181.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2730735 2732204 . - . ID=gene-VA249_RS12595;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=VA249_RS12595;old_locus_tag=VYA_23740 NZ_AP024165.1 Protein Homology CDS 2730735 2732204 . - 0 ID=cds-WP_128810068.1;Parent=gene-VA249_RS12595;Dbxref=Genbank:WP_128810068.1;Name=WP_128810068.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332236.1;locus_tag=VA249_RS12595;product=ribonuclease G;protein_id=WP_128810068.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2732223 2732792 . - . ID=gene-VA249_RS12600;Name=VA249_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12600;old_locus_tag=VYA_23750 NZ_AP024165.1 Protein Homology CDS 2732223 2732792 . - 0 ID=cds-WP_128810067.1;Parent=gene-VA249_RS12600;Dbxref=Genbank:WP_128810067.1;Name=WP_128810067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005381139.1;locus_tag=VA249_RS12600;product=Maf-like protein;protein_id=WP_128810067.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2732797 2733285 . - . ID=gene-VA249_RS12605;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=VA249_RS12605;old_locus_tag=VYA_23760 NZ_AP024165.1 Protein Homology CDS 2732797 2733285 . - 0 ID=cds-WP_128810066.1;Parent=gene-VA249_RS12605;Dbxref=Genbank:WP_128810066.1;Name=WP_128810066.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444359.1;locus_tag=VA249_RS12605;product=rod shape-determining protein MreD;protein_id=WP_128810066.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2733275 2734165 . - . ID=gene-VA249_RS12610;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=VA249_RS12610;old_locus_tag=VYA_23770 NZ_AP024165.1 Protein Homology CDS 2733275 2734165 . - 0 ID=cds-WP_128810065.1;Parent=gene-VA249_RS12610;Dbxref=Genbank:WP_128810065.1;Name=WP_128810065.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843555.1;locus_tag=VA249_RS12610;product=rod shape-determining protein MreC;protein_id=WP_128810065.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2734309 2735352 . - . ID=gene-VA249_RS12615;Name=VA249_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12615;old_locus_tag=VYA_23780 NZ_AP024165.1 Protein Homology CDS 2734309 2735352 . - 0 ID=cds-WP_099080126.1;Parent=gene-VA249_RS12615;Dbxref=Genbank:WP_099080126.1;Name=WP_099080126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=VA249_RS12615;product=rod shape-determining protein;protein_id=WP_099080126.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2735505 2739950 . - . ID=gene-VA249_RS12620;Name=VA249_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12620;old_locus_tag=VYA_23790 NZ_AP024165.1 Protein Homology CDS 2735505 2739950 . - 0 ID=cds-WP_221068182.1;Parent=gene-VA249_RS12620;Dbxref=Genbank:WP_221068182.1;Name=WP_221068182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005490538.1;locus_tag=VA249_RS12620;product=MSHA biogenesis protein MshQ;protein_id=WP_221068182.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2739950 2740393 . - . ID=gene-VA249_RS12625;Name=VA249_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12625;old_locus_tag=VYA_23800 NZ_AP024165.1 Protein Homology CDS 2739950 2740393 . - 0 ID=cds-WP_221068183.1;Parent=gene-VA249_RS12625;Dbxref=Genbank:WP_221068183.1;Name=WP_221068183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707649.1;locus_tag=VA249_RS12625;product=MSHA biogenesis protein MshP;protein_id=WP_221068183.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2740383 2741129 . - . ID=gene-VA249_RS12630;Name=VA249_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12630;old_locus_tag=VYA_23810 NZ_AP024165.1 Protein Homology CDS 2740383 2741129 . - 0 ID=cds-WP_221068184.1;Parent=gene-VA249_RS12630;Dbxref=Genbank:WP_221068184.1;Name=WP_221068184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444351.1;locus_tag=VA249_RS12630;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_221068184.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2741129 2741725 . - . ID=gene-VA249_RS12635;Name=VA249_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12635;old_locus_tag=VYA_23820 NZ_AP024165.1 Protein Homology CDS 2741129 2741725 . - 0 ID=cds-WP_221069950.1;Parent=gene-VA249_RS12635;Dbxref=Genbank:WP_221069950.1;Name=WP_221069950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017187902.1;locus_tag=VA249_RS12635;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_221069950.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2741776 2742261 . - . ID=gene-VA249_RS12640;Name=VA249_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12640;old_locus_tag=VYA_23830 NZ_AP024165.1 Protein Homology CDS 2741776 2742261 . - 0 ID=cds-WP_221068185.1;Parent=gene-VA249_RS12640;Dbxref=Genbank:WP_221068185.1;Name=WP_221068185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432805.1;locus_tag=VA249_RS12640;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_221068185.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2742377 2742610 . - . ID=gene-VA249_RS12645;Name=VA249_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12645;old_locus_tag=VYA_23840 NZ_AP024165.1 Protein Homology CDS 2742377 2742610 . - 0 ID=cds-WP_221068186.1;Parent=gene-VA249_RS12645;Dbxref=Genbank:WP_221068186.1;Name=WP_221068186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005388453.1;locus_tag=VA249_RS12645;product=MSHA biogenesis protein MshA;protein_id=WP_221068186.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2742684 2743148 . - . ID=gene-VA249_RS12650;Name=VA249_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12650;old_locus_tag=VYA_23850 NZ_AP024165.1 Protein Homology CDS 2742684 2743148 . - 0 ID=cds-WP_221068187.1;Parent=gene-VA249_RS12650;Dbxref=Genbank:WP_221068187.1;Name=WP_221068187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449445.1;locus_tag=VA249_RS12650;product=type II secretion system GspH family protein;protein_id=WP_221068187.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2743333 2743794 . - . ID=gene-VA249_RS12655;Name=VA249_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12655;old_locus_tag=VYA_23860 NZ_AP024165.1 Protein Homology CDS 2743333 2743794 . - 0 ID=cds-WP_221068188.1;Parent=gene-VA249_RS12655;Dbxref=Genbank:WP_221068188.1;Name=WP_221068188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533773.1;locus_tag=VA249_RS12655;product=MSHA biogenesis protein MshF;protein_id=WP_221068188.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2743798 2745021 . - . ID=gene-VA249_RS12660;Name=VA249_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12660;old_locus_tag=VYA_23870 NZ_AP024165.1 Protein Homology CDS 2743798 2745021 . - 0 ID=cds-WP_221068189.1;Parent=gene-VA249_RS12660;Dbxref=Genbank:WP_221068189.1;Name=WP_221068189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297334.1;locus_tag=VA249_RS12660;product=type II secretion system F family protein;protein_id=WP_221068189.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2745030 2746754 . - . ID=gene-VA249_RS12665;Name=VA249_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12665;old_locus_tag=VYA_23880 NZ_AP024165.1 Protein Homology CDS 2745030 2746754 . - 0 ID=cds-WP_221068190.1;Parent=gene-VA249_RS12665;Dbxref=Genbank:WP_221068190.1;Name=WP_221068190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434345.1;locus_tag=VA249_RS12665;product=GspE/PulE family protein;protein_id=WP_221068190.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2746751 2747929 . - . ID=gene-VA249_RS12670;Name=VA249_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12670;old_locus_tag=VYA_23890 NZ_AP024165.1 Protein Homology CDS 2746751 2747929 . - 0 ID=cds-WP_221068191.1;Parent=gene-VA249_RS12670;Dbxref=Genbank:WP_221068191.1;Name=WP_221068191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432784.1;locus_tag=VA249_RS12670;product=tetratricopeptide repeat protein;protein_id=WP_221068191.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2747914 2748759 . - . ID=gene-VA249_RS12675;Name=VA249_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12675;old_locus_tag=VYA_23900 NZ_AP024165.1 Protein Homology CDS 2747914 2748759 . - 0 ID=cds-WP_221068192.1;Parent=gene-VA249_RS12675;Dbxref=Genbank:WP_221068192.1;Name=WP_221068192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151250.1;locus_tag=VA249_RS12675;product=AAA family ATPase;protein_id=WP_221068192.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2748804 2750435 . - . ID=gene-VA249_RS12680;Name=mshL;gbkey=Gene;gene=mshL;gene_biotype=protein_coding;locus_tag=VA249_RS12680;old_locus_tag=VYA_23910 NZ_AP024165.1 Protein Homology CDS 2748804 2750435 . - 0 ID=cds-WP_221068193.1;Parent=gene-VA249_RS12680;Dbxref=Genbank:WP_221068193.1;Name=WP_221068193.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=mshL;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016788319.1;locus_tag=VA249_RS12680;product=pilus (MSHA type) biogenesis protein MshL;protein_id=WP_221068193.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2750456 2750788 . - . ID=gene-VA249_RS12685;Name=VA249_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12685;old_locus_tag=VYA_23920 NZ_AP024165.1 Protein Homology CDS 2750456 2750788 . - 0 ID=cds-WP_221068194.1;Parent=gene-VA249_RS12685;Dbxref=Genbank:WP_221068194.1;Name=WP_221068194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129004.1;locus_tag=VA249_RS12685;product=MSHA biogenesis protein MshK;protein_id=WP_221068194.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2750781 2751431 . - . ID=gene-VA249_RS12690;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=VA249_RS12690;old_locus_tag=VYA_23930 NZ_AP024165.1 Protein Homology CDS 2750781 2751431 . - 0 ID=cds-WP_221068195.1;Parent=gene-VA249_RS12690;Dbxref=Genbank:WP_221068195.1;Name=WP_221068195.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843540.1;locus_tag=VA249_RS12690;product=type II secretion system protein GspM;protein_id=WP_221068195.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2751428 2752876 . - . ID=gene-VA249_RS12695;Name=VA249_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12695;old_locus_tag=VYA_23940 NZ_AP024165.1 Protein Homology CDS 2751428 2752876 . - 0 ID=cds-WP_221068196.1;Parent=gene-VA249_RS12695;Dbxref=Genbank:WP_221068196.1;Name=WP_221068196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444325.1;locus_tag=VA249_RS12695;product=MSHA biogenesis protein MshI;protein_id=WP_221068196.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2752888 2754897 . - . ID=gene-VA249_RS12700;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=VA249_RS12700;old_locus_tag=VYA_23950 NZ_AP024165.1 Protein Homology CDS 2752888 2754897 . - 0 ID=cds-WP_221068197.1;Parent=gene-VA249_RS12700;Dbxref=Genbank:WP_221068197.1;Name=WP_221068197.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010648157.1;locus_tag=VA249_RS12700;product=RNase E specificity factor CsrD;protein_id=WP_221068197.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2755113 2755646 . - . ID=gene-VA249_RS12705;Name=VA249_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12705;old_locus_tag=VYA_23960 NZ_AP024165.1 Protein Homology CDS 2755113 2755646 . - 0 ID=cds-WP_128810047.1;Parent=gene-VA249_RS12705;Dbxref=Genbank:WP_128810047.1;Name=WP_128810047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=VA249_RS12705;product=single-stranded DNA-binding protein;protein_id=WP_128810047.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2755924 2756568 . + . ID=gene-VA249_RS12710;Name=VA249_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12710;old_locus_tag=VYA_23970 NZ_AP024165.1 Protein Homology CDS 2755924 2756568 . + 0 ID=cds-WP_128810046.1;Parent=gene-VA249_RS12710;Dbxref=Genbank:WP_128810046.1;Name=WP_128810046.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438104.1;locus_tag=VA249_RS12710;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_128810046.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2756728 2757600 . + . ID=gene-VA249_RS12715;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=VA249_RS12715;old_locus_tag=VYA_23980 NZ_AP024165.1 Protein Homology CDS 2756728 2757600 . + 0 ID=cds-WP_211915879.1;Parent=gene-VA249_RS12715;Dbxref=Genbank:WP_211915879.1;Name=WP_211915879.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843535.1;locus_tag=VA249_RS12715;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_211915879.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2757779 2760601 . + . ID=gene-VA249_RS12720;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=VA249_RS12720;old_locus_tag=VYA_23990 NZ_AP024165.1 Protein Homology CDS 2757779 2760601 . + 0 ID=cds-WP_221068198.1;Parent=gene-VA249_RS12720;Dbxref=Genbank:WP_221068198.1;Name=WP_221068198.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079386.1;locus_tag=VA249_RS12720;product=excinuclease ABC subunit UvrA;protein_id=WP_221068198.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2760668 2762446 . + . ID=gene-VA249_RS12725;Name=VA249_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12725;old_locus_tag=VYA_24000 NZ_AP024165.1 Protein Homology CDS 2760668 2762446 . + 0 ID=cds-WP_221068199.1;Parent=gene-VA249_RS12725;Dbxref=Genbank:WP_221068199.1;Name=WP_221068199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698826.1;locus_tag=VA249_RS12725;product=O-antigen ligase family protein;protein_id=WP_221068199.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2762500 2763621 . - . ID=gene-VA249_RS12730;Name=VA249_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12730;old_locus_tag=VYA_24010 NZ_AP024165.1 Protein Homology CDS 2762500 2763621 . - 0 ID=cds-WP_221068200.1;Parent=gene-VA249_RS12730;Dbxref=Genbank:WP_221068200.1;Name=WP_221068200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535927.1;locus_tag=VA249_RS12730;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_221068200.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 2763845 2764023 . + . ID=id-NZ_AP024165.1:2763845..2764023;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 2764143 2765495 . + . ID=gene-VA249_RS12735;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=VA249_RS12735;old_locus_tag=VYA_24020 NZ_AP024165.1 Protein Homology CDS 2764143 2765495 . + 0 ID=cds-WP_221068201.1;Parent=gene-VA249_RS12735;Dbxref=Genbank:WP_221068201.1;Name=WP_221068201.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535930.1;locus_tag=VA249_RS12735;product=lysine-sensitive aspartokinase 3;protein_id=WP_221068201.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2765568 2769248 . - . ID=gene-VA249_RS12740;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=VA249_RS12740;old_locus_tag=VYA_24030 NZ_AP024165.1 Protein Homology CDS 2765568 2769248 . - 0 ID=cds-WP_221068202.1;Parent=gene-VA249_RS12740;Dbxref=Genbank:WP_221068202.1;Name=WP_221068202.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005381253.1;locus_tag=VA249_RS12740;product=methionine synthase;protein_id=WP_221068202.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2769438 2770718 . + . ID=gene-VA249_RS12745;Name=VA249_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12745;old_locus_tag=VYA_24040 NZ_AP024165.1 Protein Homology CDS 2769438 2770718 . + 0 ID=cds-WP_221068203.1;Parent=gene-VA249_RS12745;Dbxref=Genbank:WP_221068203.1;Name=WP_221068203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005444304.1;locus_tag=VA249_RS12745;product=sodium:proton antiporter;protein_id=WP_221068203.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2771652 2771728 . - . ID=gene-VA249_RS12760;Name=VA249_RS12760;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12760;old_locus_tag=VYA_t00820 NZ_AP024165.1 tRNAscan-SE tRNA 2771652 2771728 . - . ID=rna-VA249_RS12760;Parent=gene-VA249_RS12760;anticodon=(pos:complement(2771692..2771694));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12760;product=tRNA-Asp NZ_AP024165.1 tRNAscan-SE exon 2771652 2771728 . - . ID=exon-VA249_RS12760-1;Parent=rna-VA249_RS12760;anticodon=(pos:complement(2771692..2771694));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12760;product=tRNA-Asp NZ_AP024165.1 RefSeq gene 2771794 2771910 . - . ID=gene-VA249_RS12765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS12765;old_locus_tag=VYA_r00110 NZ_AP024165.1 cmsearch rRNA 2771794 2771910 . - . ID=rna-VA249_RS12765;Parent=gene-VA249_RS12765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12765;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2771794 2771910 . - . ID=exon-VA249_RS12765-1;Parent=rna-VA249_RS12765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12765;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2772002 2774894 . - . ID=gene-VA249_RS12770;Name=VA249_RS12770;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12770;old_locus_tag=VYA_r00120 NZ_AP024165.1 cmsearch rRNA 2772002 2774894 . - . ID=rna-VA249_RS12770;Parent=gene-VA249_RS12770;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12770;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 2772002 2774894 . - . ID=exon-VA249_RS12770-1;Parent=rna-VA249_RS12770;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12770;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 2775207 2775282 . - . ID=gene-VA249_RS12775;Name=VA249_RS12775;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12775;old_locus_tag=VYA_t00830 NZ_AP024165.1 tRNAscan-SE tRNA 2775207 2775282 . - . ID=rna-VA249_RS12775;Parent=gene-VA249_RS12775;anticodon=(pos:complement(2775247..2775249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12775;product=tRNA-Ala NZ_AP024165.1 tRNAscan-SE exon 2775207 2775282 . - . ID=exon-VA249_RS12775-1;Parent=rna-VA249_RS12775;anticodon=(pos:complement(2775247..2775249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12775;product=tRNA-Ala NZ_AP024165.1 RefSeq gene 2775323 2775399 . - . ID=gene-VA249_RS12780;Name=VA249_RS12780;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12780;old_locus_tag=VYA_t00840 NZ_AP024165.1 tRNAscan-SE tRNA 2775323 2775399 . - . ID=rna-VA249_RS12780;Parent=gene-VA249_RS12780;anticodon=(pos:complement(2775363..2775365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12780;product=tRNA-Ile NZ_AP024165.1 tRNAscan-SE exon 2775323 2775399 . - . ID=exon-VA249_RS12780-1;Parent=rna-VA249_RS12780;anticodon=(pos:complement(2775363..2775365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12780;product=tRNA-Ile NZ_AP024165.1 RefSeq gene 2775467 2777019 . - . ID=gene-VA249_RS12785;Name=VA249_RS12785;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12785;old_locus_tag=VYA_r00130 NZ_AP024165.1 cmsearch rRNA 2775467 2777019 . - . ID=rna-VA249_RS12785;Parent=gene-VA249_RS12785;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12785;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 2775467 2777019 . - . ID=exon-VA249_RS12785-1;Parent=rna-VA249_RS12785;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12785;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 2777387 2777503 . - . ID=gene-VA249_RS12790;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS12790;old_locus_tag=VYA_r00140 NZ_AP024165.1 cmsearch rRNA 2777387 2777503 . - . ID=rna-VA249_RS12790;Parent=gene-VA249_RS12790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12790;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2777387 2777503 . - . ID=exon-VA249_RS12790-1;Parent=rna-VA249_RS12790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12790;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2777595 2780487 . - . ID=gene-VA249_RS12795;Name=VA249_RS12795;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12795;old_locus_tag=VYA_r00150 NZ_AP024165.1 cmsearch rRNA 2777595 2780487 . - . ID=rna-VA249_RS12795;Parent=gene-VA249_RS12795;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12795;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 2777595 2780487 . - . ID=exon-VA249_RS12795-1;Parent=rna-VA249_RS12795;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12795;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 2780800 2780875 . - . ID=gene-VA249_RS12800;Name=VA249_RS12800;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12800;old_locus_tag=VYA_t00850 NZ_AP024165.1 tRNAscan-SE tRNA 2780800 2780875 . - . ID=rna-VA249_RS12800;Parent=gene-VA249_RS12800;anticodon=(pos:complement(2780840..2780842));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12800;product=tRNA-Ala NZ_AP024165.1 tRNAscan-SE exon 2780800 2780875 . - . ID=exon-VA249_RS12800-1;Parent=rna-VA249_RS12800;anticodon=(pos:complement(2780840..2780842));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12800;product=tRNA-Ala NZ_AP024165.1 RefSeq gene 2780916 2780992 . - . ID=gene-VA249_RS12805;Name=VA249_RS12805;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS12805;old_locus_tag=VYA_t00860 NZ_AP024165.1 tRNAscan-SE tRNA 2780916 2780992 . - . ID=rna-VA249_RS12805;Parent=gene-VA249_RS12805;anticodon=(pos:complement(2780956..2780958));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12805;product=tRNA-Ile NZ_AP024165.1 tRNAscan-SE exon 2780916 2780992 . - . ID=exon-VA249_RS12805-1;Parent=rna-VA249_RS12805;anticodon=(pos:complement(2780956..2780958));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS12805;product=tRNA-Ile NZ_AP024165.1 RefSeq gene 2781060 2782612 . - . ID=gene-VA249_RS12810;Name=VA249_RS12810;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12810;old_locus_tag=VYA_r00160 NZ_AP024165.1 cmsearch rRNA 2781060 2782612 . - . ID=rna-VA249_RS12810;Parent=gene-VA249_RS12810;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12810;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 2781060 2782612 . - . ID=exon-VA249_RS12810-1;Parent=rna-VA249_RS12810;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12810;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 2782980 2783096 . - . ID=gene-VA249_RS12815;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS12815;old_locus_tag=VYA_r00170 NZ_AP024165.1 cmsearch rRNA 2782980 2783096 . - . ID=rna-VA249_RS12815;Parent=gene-VA249_RS12815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12815;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2782980 2783096 . - . ID=exon-VA249_RS12815-1;Parent=rna-VA249_RS12815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12815;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2783189 2786081 . - . ID=gene-VA249_RS12820;Name=VA249_RS12820;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12820;old_locus_tag=VYA_r00180 NZ_AP024165.1 cmsearch rRNA 2783189 2786081 . - . ID=rna-VA249_RS12820;Parent=gene-VA249_RS12820;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12820;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 2783189 2786081 . - . ID=exon-VA249_RS12820-1;Parent=rna-VA249_RS12820;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12820;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 2786445 2787999 . - . ID=gene-VA249_RS12825;Name=VA249_RS12825;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS12825;old_locus_tag=VYA_r00190 NZ_AP024165.1 cmsearch rRNA 2786445 2787999 . - . ID=rna-VA249_RS12825;Parent=gene-VA249_RS12825;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12825;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 2786445 2787999 . - . ID=exon-VA249_RS12825-1;Parent=rna-VA249_RS12825;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS12825;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 2788656 2789435 . - . ID=gene-VA249_RS12830;Name=VA249_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12830;old_locus_tag=VYA_24080 NZ_AP024165.1 Protein Homology CDS 2788656 2789435 . - 0 ID=cds-WP_221068205.1;Parent=gene-VA249_RS12830;Dbxref=Genbank:WP_221068205.1;Name=WP_221068205.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017632681.1;locus_tag=VA249_RS12830;product=phosphoadenylyl-sulfate reductase;protein_id=WP_221068205.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2789428 2791164 . - . ID=gene-VA249_RS12835;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=VA249_RS12835;old_locus_tag=VYA_24090 NZ_AP024165.1 Protein Homology CDS 2789428 2791164 . - 0 ID=cds-WP_221068206.1;Parent=gene-VA249_RS12835;Dbxref=Genbank:WP_221068206.1;Name=WP_221068206.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010318903.1;locus_tag=VA249_RS12835;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_221068206.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2791164 2793038 . - . ID=gene-VA249_RS12840;Name=VA249_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12840;old_locus_tag=VYA_24100 NZ_AP024165.1 Protein Homology CDS 2791164 2793038 . - 0 ID=cds-WP_221068207.1;Parent=gene-VA249_RS12840;Dbxref=Genbank:WP_221068207.1;Name=WP_221068207.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196776.1;locus_tag=VA249_RS12840;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_221068207.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2793153 2793383 . - . ID=gene-VA249_RS12845;Name=VA249_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12845;old_locus_tag=VYA_24110 NZ_AP024165.1 Protein Homology CDS 2793153 2793383 . - 0 ID=cds-WP_128810035.1;Parent=gene-VA249_RS12845;Dbxref=Genbank:WP_128810035.1;Name=WP_128810035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016790122.1;locus_tag=VA249_RS12845;product=hypothetical protein;protein_id=WP_128810035.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2793533 2794195 . - . ID=gene-VA249_RS12850;Name=VA249_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12850;old_locus_tag=VYA_24120 NZ_AP024165.1 Protein Homology CDS 2793533 2794195 . - 0 ID=cds-WP_128810034.1;Parent=gene-VA249_RS12850;Dbxref=Genbank:WP_128810034.1;Name=WP_128810034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438464.1;locus_tag=VA249_RS12850;product=TIGR04219 family outer membrane beta-barrel protein;protein_id=WP_128810034.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2794295 2794510 . - . ID=gene-VA249_RS12855;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=VA249_RS12855;old_locus_tag=VYA_24130 NZ_AP024165.1 Protein Homology CDS 2794295 2794510 . - 0 ID=cds-WP_211915868.1;Parent=gene-VA249_RS12855;Dbxref=Genbank:WP_211915868.1;Name=WP_211915868.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451528.1;locus_tag=VA249_RS12855;product=envelope stress response protein PspG;protein_id=WP_211915868.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2794675 2795655 . - . ID=gene-VA249_RS12860;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=VA249_RS12860;old_locus_tag=VYA_24140 NZ_AP024165.1 Protein Homology CDS 2794675 2795655 . - 0 ID=cds-WP_221068208.1;Parent=gene-VA249_RS12860;Dbxref=Genbank:WP_221068208.1;Name=WP_221068208.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643522.1;locus_tag=VA249_RS12860;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_221068208.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2795937 2796401 . + . ID=gene-VA249_RS12865;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=VA249_RS12865;old_locus_tag=VYA_24150 NZ_AP024165.1 Protein Homology CDS 2795937 2796401 . + 0 ID=cds-WP_128810031.1;Parent=gene-VA249_RS12865;Dbxref=Genbank:WP_128810031.1;Name=WP_128810031.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438461.1;locus_tag=VA249_RS12865;product=zinc uptake transcriptional repressor Zur;protein_id=WP_128810031.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2796411 2796872 . + . ID=gene-VA249_RS12870;Name=VA249_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12870;old_locus_tag=VYA_24160 NZ_AP024165.1 Protein Homology CDS 2796411 2796872 . + 0 ID=cds-WP_099080830.1;Parent=gene-VA249_RS12870;Dbxref=Genbank:WP_099080830.1;Name=WP_099080830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410369.1;locus_tag=VA249_RS12870;product=chemotaxis protein CheX;protein_id=WP_099080830.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2796973 2798625 . - . ID=gene-VA249_RS12875;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=VA249_RS12875;old_locus_tag=VYA_24170 NZ_AP024165.1 Protein Homology CDS 2796973 2798625 . - 0 ID=cds-WP_221068209.1;Parent=gene-VA249_RS12875;Dbxref=Genbank:WP_221068209.1;Name=WP_221068209.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017051397.1;locus_tag=VA249_RS12875;product=glucose-6-phosphate isomerase;protein_id=WP_221068209.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2798930 2799349 . + . ID=gene-VA249_RS12880;Name=VA249_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12880;old_locus_tag=VYA_24180 NZ_AP024165.1 Protein Homology CDS 2798930 2799349 . + 0 ID=cds-WP_221068210.1;Parent=gene-VA249_RS12880;Dbxref=Genbank:WP_221068210.1;Name=WP_221068210.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017108649.1;locus_tag=VA249_RS12880;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_221068210.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2799403 2800599 . - . ID=gene-VA249_RS12885;Name=VA249_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12885;old_locus_tag=VYA_24190 NZ_AP024165.1 Protein Homology CDS 2799403 2800599 . - 0 ID=cds-WP_221068211.1;Parent=gene-VA249_RS12885;Dbxref=Genbank:WP_221068211.1;Name=WP_221068211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451523.1;locus_tag=VA249_RS12885;product=hypothetical protein;protein_id=WP_221068211.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2800603 2801679 . - . ID=gene-VA249_RS12890;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=VA249_RS12890;old_locus_tag=VYA_24200 NZ_AP024165.1 Protein Homology CDS 2800603 2801679 . - 0 ID=cds-WP_221069951.1;Parent=gene-VA249_RS12890;Dbxref=Genbank:WP_221069951.1;Name=WP_221069951.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019277270.1;locus_tag=VA249_RS12890;product=alanine racemase;protein_id=WP_221069951.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2801693 2803093 . - . ID=gene-VA249_RS12895;Name=VA249_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12895;old_locus_tag=VYA_24210 NZ_AP024165.1 Protein Homology CDS 2801693 2803093 . - 0 ID=cds-WP_221068212.1;Parent=gene-VA249_RS12895;Dbxref=Genbank:WP_221068212.1;Name=WP_221068212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532691.1;locus_tag=VA249_RS12895;product=replicative DNA helicase;protein_id=WP_221068212.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2803299 2804063 . + . ID=gene-VA249_RS12900;Name=VA249_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12900;old_locus_tag=VYA_24220 NZ_AP024165.1 Protein Homology CDS 2803299 2804063 . + 0 ID=cds-WP_221068213.1;Parent=gene-VA249_RS12900;Dbxref=Genbank:WP_221068213.1;Name=WP_221068213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005381276.1;locus_tag=VA249_RS12900;product=DUF481 domain-containing protein;protein_id=WP_221068213.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2804165 2804617 . - . ID=gene-VA249_RS12905;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=VA249_RS12905;old_locus_tag=VYA_24230 NZ_AP024165.1 Protein Homology CDS 2804165 2804617 . - 0 ID=cds-WP_128810025.1;Parent=gene-VA249_RS12905;Dbxref=Genbank:WP_128810025.1;Name=WP_128810025.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005421134.1;locus_tag=VA249_RS12905;product=50S ribosomal protein L9;protein_id=WP_128810025.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2804650 2804877 . - . ID=gene-VA249_RS12910;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=VA249_RS12910;old_locus_tag=VYA_24240 NZ_AP024165.1 Protein Homology CDS 2804650 2804877 . - 0 ID=cds-WP_000090472.1;Parent=gene-VA249_RS12910;Dbxref=Genbank:WP_000090472.1;Name=WP_000090472.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=VA249_RS12910;product=30S ribosomal protein S18;protein_id=WP_000090472.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2804894 2805196 . - . ID=gene-VA249_RS12915;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=VA249_RS12915;old_locus_tag=VYA_24250 NZ_AP024165.1 Protein Homology CDS 2804894 2805196 . - 0 ID=cds-WP_128810024.1;Parent=gene-VA249_RS12915;Dbxref=Genbank:WP_128810024.1;Name=WP_128810024.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467185.1;locus_tag=VA249_RS12915;product=primosomal replication protein N;protein_id=WP_128810024.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2805205 2805585 . - . ID=gene-VA249_RS12920;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=VA249_RS12920;old_locus_tag=VYA_24260 NZ_AP024165.1 Protein Homology CDS 2805205 2805585 . - 0 ID=cds-WP_128810023.1;Parent=gene-VA249_RS12920;Dbxref=Genbank:WP_128810023.1;Name=WP_128810023.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079362.1;locus_tag=VA249_RS12920;product=30S ribosomal protein S6;protein_id=WP_128810023.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2805829 2806500 . - . ID=gene-VA249_RS12925;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=VA249_RS12925;old_locus_tag=VYA_24270 NZ_AP024165.1 Protein Homology CDS 2805829 2806500 . - 0 ID=cds-WP_128810022.1;Parent=gene-VA249_RS12925;Dbxref=Genbank:WP_128810022.1;Name=WP_128810022.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532698.1;locus_tag=VA249_RS12925;product=ribulose-phosphate 3-epimerase;protein_id=WP_128810022.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2806600 2807439 . - . ID=gene-VA249_RS12930;Name=VA249_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12930;old_locus_tag=VYA_24280 NZ_AP024165.1 Protein Homology CDS 2806600 2807439 . - 0 ID=cds-WP_221068214.1;Parent=gene-VA249_RS12930;Dbxref=Genbank:WP_221068214.1;Name=WP_221068214.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010443897.1;locus_tag=VA249_RS12930;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_221068214.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2807509 2809023 . - . ID=gene-VA249_RS12935;Name=VA249_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12935;old_locus_tag=VYA_24290 NZ_AP024165.1 Protein Homology CDS 2807509 2809023 . - 0 ID=cds-WP_221068215.1;Parent=gene-VA249_RS12935;Dbxref=Genbank:WP_221068215.1;Name=WP_221068215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438439.1;locus_tag=VA249_RS12935;product=AAA family ATPase;protein_id=WP_221068215.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2809075 2810175 . - . ID=gene-VA249_RS12940;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=VA249_RS12940;old_locus_tag=VYA_24300 NZ_AP024165.1 Protein Homology CDS 2809075 2810175 . - 0 ID=cds-WP_221068216.1;Parent=gene-VA249_RS12940;Dbxref=Genbank:WP_221068216.1;Name=WP_221068216.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017104650.1;locus_tag=VA249_RS12940;product=3-dehydroquinate synthase;protein_id=WP_221068216.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2810204 2810722 . - . ID=gene-VA249_RS12945;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=VA249_RS12945;old_locus_tag=VYA_24310 NZ_AP024165.1 Protein Homology CDS 2810204 2810722 . - 0 ID=cds-WP_099080818.1;Parent=gene-VA249_RS12945;Dbxref=Genbank:WP_099080818.1;Name=WP_099080818.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004415935.1;locus_tag=VA249_RS12945;product=shikimate kinase AroK;protein_id=WP_099080818.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2810911 2812626 . - . ID=gene-VA249_RS12950;Name=VA249_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12950;old_locus_tag=VYA_24320 NZ_AP024165.1 Protein Homology CDS 2810911 2812626 . - 0 ID=cds-WP_221069953.1;Parent=gene-VA249_RS12950;Dbxref=Genbank:WP_221069953.1;Name=WP_221069953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705521.1;locus_tag=VA249_RS12950;product=type IV pilus secretin PilQ family protein;protein_id=WP_221069953.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2812650 2813159 . - . ID=gene-VA249_RS12955;Name=VA249_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12955;old_locus_tag=VYA_24330 NZ_AP024165.1 Protein Homology CDS 2812650 2813159 . - 0 ID=cds-WP_221068217.1;Parent=gene-VA249_RS12955;Dbxref=Genbank:WP_221068217.1;Name=WP_221068217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705520.1;locus_tag=VA249_RS12955;product=pilus assembly protein PilP;protein_id=WP_221068217.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2813149 2813742 . - . ID=gene-VA249_RS12960;Name=pilO;gbkey=Gene;gene=pilO;gene_biotype=protein_coding;locus_tag=VA249_RS12960;old_locus_tag=VYA_24340 NZ_AP024165.1 Protein Homology CDS 2813149 2813742 . - 0 ID=cds-WP_221068218.1;Parent=gene-VA249_RS12960;Dbxref=Genbank:WP_221068218.1;Name=WP_221068218.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;gene=pilO;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005480482.1;locus_tag=VA249_RS12960;product=type 4a pilus biogenesis protein PilO;protein_id=WP_221068218.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2813735 2814310 . - . ID=gene-VA249_RS12965;Name=VA249_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12965;old_locus_tag=VYA_24350 NZ_AP024165.1 Protein Homology CDS 2813735 2814310 . - 0 ID=cds-WP_221068219.1;Parent=gene-VA249_RS12965;Dbxref=Genbank:WP_221068219.1;Name=WP_221068219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532712.1;locus_tag=VA249_RS12965;product=PilN domain-containing protein;protein_id=WP_221068219.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2814294 2815307 . - . ID=gene-VA249_RS12970;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=VA249_RS12970;old_locus_tag=VYA_24360 NZ_AP024165.1 Protein Homology CDS 2814294 2815307 . - 0 ID=cds-WP_221068220.1;Parent=gene-VA249_RS12970;Dbxref=Genbank:WP_221068220.1;Name=WP_221068220.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilM;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432712.1;locus_tag=VA249_RS12970;product=type IV pilus assembly protein PilM;protein_id=WP_221068220.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2815449 2818013 . + . ID=gene-VA249_RS12975;Name=VA249_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12975;old_locus_tag=VYA_24370 NZ_AP024165.1 Protein Homology CDS 2815449 2818013 . + 0 ID=cds-WP_221068221.1;Parent=gene-VA249_RS12975;Dbxref=Genbank:WP_221068221.1;Name=WP_221068221.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010443931.1;locus_tag=VA249_RS12975;product=PBP1A family penicillin-binding protein;protein_id=WP_221068221.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2818085 2818993 . - . ID=gene-VA249_RS12980;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=VA249_RS12980;old_locus_tag=VYA_24380 NZ_AP024165.1 Protein Homology CDS 2818085 2818993 . - 0 ID=cds-WP_221068222.1;Parent=gene-VA249_RS12980;Dbxref=Genbank:WP_221068222.1;Name=WP_221068222.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010443932.1;locus_tag=VA249_RS12980;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_221068222.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2819167 2819895 . + . ID=gene-VA249_RS12985;Name=VA249_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12985;old_locus_tag=VYA_24390 NZ_AP024165.1 Protein Homology CDS 2819167 2819895 . + 0 ID=cds-WP_128810014.1;Parent=gene-VA249_RS12985;Dbxref=Genbank:WP_128810014.1;Name=WP_128810014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016783699.1;locus_tag=VA249_RS12985;product=glutathione peroxidase;protein_id=WP_128810014.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2820374 2820670 . + . ID=gene-VA249_RS12990;Name=VA249_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS12990 NZ_AP024165.1 Protein Homology CDS 2820374 2820670 . + 0 ID=cds-WP_221068223.1;Parent=gene-VA249_RS12990;Dbxref=Genbank:WP_221068223.1;Name=WP_221068223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010443934.1;locus_tag=VA249_RS12990;product=DUF3624 family protein;protein_id=WP_221068223.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2820873 2822747 . - . ID=gene-VA249_RS12995;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=VA249_RS12995;old_locus_tag=VYA_24400 NZ_AP024165.1 Protein Homology CDS 2820873 2822747 . - 0 ID=cds-WP_221068224.1;Parent=gene-VA249_RS12995;Dbxref=Genbank:WP_221068224.1;Name=WP_221068224.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019821398.1;locus_tag=VA249_RS12995;product=argininosuccinate lyase;protein_id=WP_221068224.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2822996 2824210 . - . ID=gene-VA249_RS13000;Name=VA249_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13000;old_locus_tag=VYA_24410 NZ_AP024165.1 Protein Homology CDS 2822996 2824210 . - 0 ID=cds-WP_221068225.1;Parent=gene-VA249_RS13000;Dbxref=Genbank:WP_221068225.1;Name=WP_221068225.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705512.1;locus_tag=VA249_RS13000;product=argininosuccinate synthase;protein_id=WP_221068225.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2824301 2825092 . - . ID=gene-VA249_RS13005;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=VA249_RS13005;old_locus_tag=VYA_24420 NZ_AP024165.1 Protein Homology CDS 2824301 2825092 . - 0 ID=cds-WP_221068226.1;Parent=gene-VA249_RS13005;Dbxref=Genbank:WP_221068226.1;Name=WP_221068226.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435314.1;locus_tag=VA249_RS13005;product=acetylglutamate kinase;protein_id=WP_221068226.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2825114 2826118 . - . ID=gene-VA249_RS13010;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=VA249_RS13010;old_locus_tag=VYA_24430 NZ_AP024165.1 Protein Homology CDS 2825114 2826118 . - 0 ID=cds-WP_221068227.1;Parent=gene-VA249_RS13010;Dbxref=Genbank:WP_221068227.1;Name=WP_221068227.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004729679.1;locus_tag=VA249_RS13010;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_221068227.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2826263 2827399 . + . ID=gene-VA249_RS13015;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=VA249_RS13015;old_locus_tag=VYA_24440 NZ_AP024165.1 Protein Homology CDS 2826263 2827399 . + 0 ID=cds-WP_128810008.1;Parent=gene-VA249_RS13015;Dbxref=Genbank:WP_128810008.1;Name=WP_128810008.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233160.1;locus_tag=VA249_RS13015;product=acetylornithine deacetylase;protein_id=WP_128810008.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2827678 2830311 . + . ID=gene-VA249_RS13020;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=VA249_RS13020;old_locus_tag=VYA_24450 NZ_AP024165.1 Protein Homology CDS 2827678 2830311 . + 0 ID=cds-WP_128812228.1;Parent=gene-VA249_RS13020;Dbxref=Genbank:WP_128812228.1;Name=WP_128812228.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297401.1;locus_tag=VA249_RS13020;product=phosphoenolpyruvate carboxylase;protein_id=WP_128812228.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2830757 2831296 . + . ID=gene-VA249_RS13025;Name=VA249_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13025;old_locus_tag=VYA_24460 NZ_AP024165.1 Protein Homology CDS 2830757 2831296 . + 0 ID=cds-WP_128810007.1;Parent=gene-VA249_RS13025;Dbxref=Genbank:WP_128810007.1;Name=WP_128810007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010443942.1;locus_tag=VA249_RS13025;product=PadR family transcriptional regulator;protein_id=WP_128810007.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2831378 2832280 . - . ID=gene-VA249_RS13030;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=VA249_RS13030;old_locus_tag=VYA_24470 NZ_AP024165.1 Protein Homology CDS 2831378 2832280 . - 0 ID=cds-WP_221068228.1;Parent=gene-VA249_RS13030;Dbxref=Genbank:WP_221068228.1;Name=WP_221068228.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126447.1;locus_tag=VA249_RS13030;product=methylenetetrahydrofolate reductase;protein_id=WP_221068228.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2832585 2834993 . - . ID=gene-VA249_RS13035;Name=VA249_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13035;old_locus_tag=VYA_24480 NZ_AP024165.1 Protein Homology CDS 2832585 2834993 . - 0 ID=cds-WP_221068229.1;Parent=gene-VA249_RS13035;Dbxref=Genbank:WP_221068229.1;Name=WP_221068229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435325.1;locus_tag=VA249_RS13035;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_221068229.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2835011 2836171 . - . ID=gene-VA249_RS13040;Name=VA249_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13040;old_locus_tag=VYA_24490 NZ_AP024165.1 Protein Homology CDS 2835011 2836171 . - 0 ID=cds-WP_221068230.1;Parent=gene-VA249_RS13040;Dbxref=Genbank:WP_221068230.1;Name=WP_221068230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196258.1;locus_tag=VA249_RS13040;product=O-succinylhomoserine (thiol)-lyase;protein_id=WP_221068230.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2836400 2836720 . + . ID=gene-VA249_RS13045;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=VA249_RS13045;old_locus_tag=VYA_24500 NZ_AP024165.1 Protein Homology CDS 2836400 2836720 . + 0 ID=cds-WP_128810003.1;Parent=gene-VA249_RS13045;Dbxref=Genbank:WP_128810003.1;Name=WP_128810003.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017052595.1;locus_tag=VA249_RS13045;product=met regulon transcriptional regulator MetJ;protein_id=WP_128810003.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2836831 2838108 . - . ID=gene-VA249_RS13050;Name=VA249_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13050;old_locus_tag=VYA_24510 NZ_AP024165.1 Protein Homology CDS 2836831 2838108 . - 0 ID=cds-WP_211915845.1;Parent=gene-VA249_RS13050;Dbxref=Genbank:WP_211915845.1;Name=WP_211915845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643468.1;locus_tag=VA249_RS13050;product=malate dehydrogenase;protein_id=WP_211915845.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2838310 2838786 . - . ID=gene-VA249_RS13055;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=VA249_RS13055;old_locus_tag=VYA_24520 NZ_AP024165.1 Protein Homology CDS 2838310 2838786 . - 0 ID=cds-WP_128810001.1;Parent=gene-VA249_RS13055;Dbxref=Genbank:WP_128810001.1;Name=WP_128810001.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675495.1;locus_tag=VA249_RS13055;product=bacterioferritin;protein_id=WP_128810001.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2838859 2839047 . - . ID=gene-VA249_RS13060;Name=VA249_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13060;old_locus_tag=VYA_24530 NZ_AP024165.1 Protein Homology CDS 2838859 2839047 . - 0 ID=cds-WP_211915844.1;Parent=gene-VA249_RS13060;Dbxref=Genbank:WP_211915844.1;Name=WP_211915844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010443946.1;locus_tag=VA249_RS13060;product=bacterioferritin-associated ferredoxin;protein_id=WP_211915844.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2839383 2840567 . - . ID=gene-VA249_RS13065;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=VA249_RS13065;old_locus_tag=VYA_24540 NZ_AP024165.1 Protein Homology CDS 2839383 2840567 . - 0 ID=cds-WP_221068231.1;Parent=gene-VA249_RS13065;Dbxref=Genbank:WP_221068231.1;Name=WP_221068231.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151305.1;locus_tag=VA249_RS13065;product=elongation factor Tu;protein_id=WP_221068231.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2840721 2842820 . - . ID=gene-VA249_RS13070;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=VA249_RS13070;old_locus_tag=VYA_24550 NZ_AP024165.1 Protein Homology CDS 2840721 2842820 . - 0 ID=cds-WP_211915843.1;Parent=gene-VA249_RS13070;Dbxref=Genbank:WP_211915843.1;Name=WP_211915843.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595136.1;locus_tag=VA249_RS13070;product=elongation factor G;protein_id=WP_211915843.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2842960 2843430 . - . ID=gene-VA249_RS13075;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=VA249_RS13075;old_locus_tag=VYA_24560 NZ_AP024165.1 Protein Homology CDS 2842960 2843430 . - 0 ID=cds-WP_045957025.1;Parent=gene-VA249_RS13075;Dbxref=Genbank:WP_045957025.1;Name=WP_045957025.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=VA249_RS13075;product=30S ribosomal protein S7;protein_id=WP_045957025.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2843549 2843923 . - . ID=gene-VA249_RS13080;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=VA249_RS13080;old_locus_tag=VYA_24570 NZ_AP024165.1 Protein Homology CDS 2843549 2843923 . - 0 ID=cds-WP_004399892.1;Parent=gene-VA249_RS13080;Dbxref=Genbank:WP_004399892.1;Name=WP_004399892.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=VA249_RS13080;product=30S ribosomal protein S12;protein_id=WP_004399892.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2844102 2844377 . - . ID=gene-VA249_RS13085;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=VA249_RS13085;old_locus_tag=VYA_24580 NZ_AP024165.1 Protein Homology CDS 2844102 2844377 . - 0 ID=cds-WP_221068232.1;Parent=gene-VA249_RS13085;Dbxref=Genbank:WP_221068232.1;Name=WP_221068232.1;Ontology_term=GO:0002098,GO:0016782;gbkey=CDS;gene=tusB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843436.1;locus_tag=VA249_RS13085;product=sulfurtransferase complex subunit TusB;protein_id=WP_221068232.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2844385 2844741 . - . ID=gene-VA249_RS13090;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=VA249_RS13090;old_locus_tag=VYA_24590 NZ_AP024165.1 Protein Homology CDS 2844385 2844741 . - 0 ID=cds-WP_128809997.1;Parent=gene-VA249_RS13090;Dbxref=Genbank:WP_128809997.1;Name=WP_128809997.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843435.1;locus_tag=VA249_RS13090;product=sulfurtransferase complex subunit TusC;protein_id=WP_128809997.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2844738 2845133 . - . ID=gene-VA249_RS13095;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=VA249_RS13095;old_locus_tag=VYA_24600 NZ_AP024165.1 Protein Homology CDS 2844738 2845133 . - 0 ID=cds-WP_221068233.1;Parent=gene-VA249_RS13095;Dbxref=Genbank:WP_221068233.1;Name=WP_221068233.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079312.1;locus_tag=VA249_RS13095;product=sulfurtransferase complex subunit TusD;protein_id=WP_221068233.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2845136 2845852 . - . ID=gene-VA249_RS13100;Name=VA249_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13100;old_locus_tag=VYA_24610 NZ_AP024165.1 Protein Homology CDS 2845136 2845852 . - 0 ID=cds-WP_128809995.1;Parent=gene-VA249_RS13100;Dbxref=Genbank:WP_128809995.1;Name=WP_128809995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438378.1;locus_tag=VA249_RS13100;product=transcriptional regulator;protein_id=WP_128809995.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2845998 2846780 . - . ID=gene-VA249_RS13105;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=VA249_RS13105;old_locus_tag=VYA_24620 NZ_AP024165.1 Protein Homology CDS 2845998 2846780 . - 0 ID=cds-WP_221068234.1;Parent=gene-VA249_RS13105;Dbxref=Genbank:WP_221068234.1;Name=WP_221068234.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451465.1;locus_tag=VA249_RS13105;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_221068234.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2846909 2847895 . + . ID=gene-VA249_RS13110;Name=VA249_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13110;old_locus_tag=VYA_24630 NZ_AP024165.1 Protein Homology CDS 2846909 2847895 . + 0 ID=cds-WP_221068235.1;Parent=gene-VA249_RS13110;Dbxref=Genbank:WP_221068235.1;Name=WP_221068235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020336170.1;locus_tag=VA249_RS13110;product=hypothetical protein;protein_id=WP_221068235.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2847892 2848119 . + . ID=gene-VA249_RS13115;Name=VA249_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13115;old_locus_tag=VYA_24640 NZ_AP024165.1 Protein Homology CDS 2847892 2848119 . + 0 ID=cds-WP_128809992.1;Parent=gene-VA249_RS13115;Dbxref=Genbank:WP_128809992.1;Name=WP_128809992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017055807.1;locus_tag=VA249_RS13115;product=SlyX family protein;protein_id=WP_128809992.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2848208 2849149 . - . ID=gene-VA249_RS13120;Name=VA249_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13120;old_locus_tag=VYA_24650 NZ_AP024165.1 Protein Homology CDS 2848208 2849149 . - 0 ID=cds-WP_221068236.1;Parent=gene-VA249_RS13120;Dbxref=Genbank:WP_221068236.1;Name=WP_221068236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126456.1;locus_tag=VA249_RS13120;product=isoaspartyl peptidase/L-asparaginase;protein_id=WP_221068236.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2849295 2849870 . - . ID=gene-VA249_RS13125;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=VA249_RS13125;old_locus_tag=VYA_24660 NZ_AP024165.1 Protein Homology CDS 2849295 2849870 . - 0 ID=cds-WP_211915840.1;Parent=gene-VA249_RS13125;Dbxref=Genbank:WP_211915840.1;Name=WP_211915840.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432768.1;locus_tag=VA249_RS13125;product=peptidylprolyl isomerase;protein_id=WP_211915840.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2849959 2850159 . - . ID=gene-VA249_RS13130;Name=VA249_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13130;old_locus_tag=VYA_24670 NZ_AP024165.1 Protein Homology CDS 2849959 2850159 . - 0 ID=cds-WP_128809989.1;Parent=gene-VA249_RS13130;Dbxref=Genbank:WP_128809989.1;Name=WP_128809989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196244.1;locus_tag=VA249_RS13130;product=YheV family putative metal-binding protein;protein_id=WP_128809989.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2850195 2851991 . - . ID=gene-VA249_RS13135;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=VA249_RS13135;old_locus_tag=VYA_24680 NZ_AP024165.1 Protein Homology CDS 2850195 2851991 . - 0 ID=cds-WP_221068237.1;Parent=gene-VA249_RS13135;Dbxref=Genbank:WP_221068237.1;Name=WP_221068237.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005485553.1;locus_tag=VA249_RS13135;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_221068237.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2851975 2852562 . - . ID=gene-VA249_RS13140;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=VA249_RS13140;old_locus_tag=VYA_24690 NZ_AP024165.1 Protein Homology CDS 2851975 2852562 . - 0 ID=cds-WP_221069954.1;Parent=gene-VA249_RS13140;Dbxref=Genbank:WP_221069954.1;Name=WP_221069954.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697547.1;locus_tag=VA249_RS13140;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_221069954.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2852730 2854649 . + . ID=gene-VA249_RS13145;Name=VA249_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13145;old_locus_tag=VYA_24700 NZ_AP024165.1 Protein Homology CDS 2852730 2854649 . + 0 ID=cds-WP_211915837.1;Parent=gene-VA249_RS13145;Dbxref=Genbank:WP_211915837.1;Name=WP_211915837.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697546.1;locus_tag=VA249_RS13145;product=ABC transporter ATP-binding protein;protein_id=WP_211915837.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2854646 2855125 . + . ID=gene-VA249_RS13150;Name=VA249_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13150;old_locus_tag=VYA_24710 NZ_AP024165.1 Protein Homology CDS 2854646 2855125 . + 0 ID=cds-WP_128809985.1;Parent=gene-VA249_RS13150;Dbxref=Genbank:WP_128809985.1;Name=WP_128809985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819679.1;locus_tag=VA249_RS13150;product=TIGR02444 family protein;protein_id=WP_128809985.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2855226 2856227 . + . ID=gene-VA249_RS13155;Name=VA249_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13155;old_locus_tag=VYA_24720 NZ_AP024165.1 Protein Homology CDS 2855226 2856227 . + 0 ID=cds-WP_128809984.1;Parent=gene-VA249_RS13155;Dbxref=Genbank:WP_128809984.1;Name=WP_128809984.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532191.1;locus_tag=VA249_RS13155;product=hydrolase;protein_id=WP_128809984.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2856276 2856488 . + . ID=gene-VA249_RS13160;Name=VA249_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13160;old_locus_tag=VYA_24730 NZ_AP024165.1 Protein Homology CDS 2856276 2856488 . + 0 ID=cds-WP_128809983.1;Parent=gene-VA249_RS13160;Dbxref=Genbank:WP_128809983.1;Name=WP_128809983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458136.1;locus_tag=VA249_RS13160;product=YheU family protein;protein_id=WP_128809983.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2856616 2857485 . + . ID=gene-VA249_RS13165;Name=VA249_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13165;old_locus_tag=VYA_24740 NZ_AP024165.1 Protein Homology CDS 2856616 2857485 . + 0 ID=cds-WP_128812224.1;Parent=gene-VA249_RS13165;Dbxref=Genbank:WP_128812224.1;Name=WP_128812224.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017025417.1;locus_tag=VA249_RS13165;product=phosphoribulokinase;protein_id=WP_128812224.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2857725 2858357 . + . ID=gene-VA249_RS13170;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=VA249_RS13170;old_locus_tag=VYA_24750 NZ_AP024165.1 Protein Homology CDS 2857725 2858357 . + 0 ID=cds-WP_005381432.1;Parent=gene-VA249_RS13170;Dbxref=Genbank:WP_005381432.1;Name=WP_005381432.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=VA249_RS13170;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_005381432.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2858459 2859253 . - . ID=gene-VA249_RS13175;Name=VA249_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13175;old_locus_tag=VYA_24760 NZ_AP024165.1 Protein Homology CDS 2858459 2859253 . - 0 ID=cds-WP_221068238.1;Parent=gene-VA249_RS13175;Dbxref=Genbank:WP_221068238.1;Name=WP_221068238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010318740.1;locus_tag=VA249_RS13175;product=DUF1338 domain-containing protein;protein_id=WP_221068238.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2859515 2860972 . - . ID=gene-VA249_RS13180;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=VA249_RS13180;old_locus_tag=VYA_24770 NZ_AP024165.1 Protein Homology CDS 2859515 2860972 . - 0 ID=cds-WP_221068239.1;Parent=gene-VA249_RS13180;Dbxref=Genbank:WP_221068239.1;Name=WP_221068239.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126463.1;locus_tag=VA249_RS13180;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_221068239.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2861001 2862020 . - . ID=gene-VA249_RS13185;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=VA249_RS13185;old_locus_tag=VYA_24780 NZ_AP024165.1 Protein Homology CDS 2861001 2862020 . - 0 ID=cds-WP_221068240.1;Parent=gene-VA249_RS13185;Dbxref=Genbank:WP_221068240.1;Name=WP_221068240.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016796008.1;locus_tag=VA249_RS13185;product=arginine N-succinyltransferase;protein_id=WP_221068240.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2862130 2863341 . - . ID=gene-VA249_RS13190;Name=VA249_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13190;old_locus_tag=VYA_24790 NZ_AP024165.1 Protein Homology CDS 2862130 2863341 . - 0 ID=cds-WP_128809980.1;Parent=gene-VA249_RS13190;Dbxref=Genbank:WP_128809980.1;Name=WP_128809980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458126.1;locus_tag=VA249_RS13190;product=aspartate aminotransferase family protein;protein_id=WP_128809980.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2863703 2864290 . - . ID=gene-VA249_RS13195;Name=VA249_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13195;old_locus_tag=VYA_24800 NZ_AP024165.1 Protein Homology CDS 2863703 2864290 . - 0 ID=cds-WP_211916528.1;Parent=gene-VA249_RS13195;Dbxref=Genbank:WP_211916528.1;Name=WP_211916528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196237.1;locus_tag=VA249_RS13195;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_211916528.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2864473 2865510 . - . ID=gene-VA249_RS13200;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=VA249_RS13200;old_locus_tag=VYA_24810 NZ_AP024165.1 Protein Homology CDS 2864473 2865510 . - 0 ID=cds-WP_128809978.1;Parent=gene-VA249_RS13200;Dbxref=Genbank:WP_128809978.1;Name=WP_128809978.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017038792.1;locus_tag=VA249_RS13200;product=tryptophan--tRNA ligase;protein_id=WP_128809978.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2865626 2866312 . - . ID=gene-VA249_RS13205;Name=VA249_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13205;old_locus_tag=VYA_24820 NZ_AP024165.1 Protein Homology CDS 2865626 2866312 . - 0 ID=cds-WP_221068241.1;Parent=gene-VA249_RS13205;Dbxref=Genbank:WP_221068241.1;Name=WP_221068241.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848912.1;locus_tag=VA249_RS13205;product=phosphoglycolate phosphatase;protein_id=WP_221068241.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2866420 2867163 . - . ID=gene-VA249_RS13210;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=VA249_RS13210;old_locus_tag=VYA_24830 NZ_AP024165.1 Protein Homology CDS 2866420 2867163 . - 0 ID=cds-WP_128809976.1;Parent=gene-VA249_RS13210;Dbxref=Genbank:WP_128809976.1;Name=WP_128809976.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079287.1;locus_tag=VA249_RS13210;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_128809976.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2867243 2869750 . - . ID=gene-VA249_RS13215;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=VA249_RS13215;old_locus_tag=VYA_24840 NZ_AP024165.1 Protein Homology CDS 2867243 2869750 . - 0 ID=cds-WP_221068242.1;Parent=gene-VA249_RS13215;Dbxref=Genbank:WP_221068242.1;Name=WP_221068242.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451428.1;locus_tag=VA249_RS13215;product=ribonuclease R;protein_id=WP_221068242.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2869856 2870281 . - . ID=gene-VA249_RS13220;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=VA249_RS13220;old_locus_tag=VYA_24850 NZ_AP024165.1 Protein Homology CDS 2869856 2870281 . - 0 ID=cds-WP_128809974.1;Parent=gene-VA249_RS13220;Dbxref=Genbank:WP_128809974.1;Name=WP_128809974.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460673.1;locus_tag=VA249_RS13220;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_128809974.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2870393 2871577 . + . ID=gene-VA249_RS13225;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=VA249_RS13225;old_locus_tag=VYA_24860 NZ_AP024165.1 Protein Homology CDS 2870393 2871577 . + 0 ID=cds-WP_221068243.1;Parent=gene-VA249_RS13225;Dbxref=Genbank:WP_221068243.1;Name=WP_221068243.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005387942.1;locus_tag=VA249_RS13225;product=NO-inducible flavohemoprotein;protein_id=WP_221068243.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2871700 2872335 . - . ID=gene-VA249_RS13230;Name=VA249_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13230;old_locus_tag=VYA_24870 NZ_AP024165.1 Protein Homology CDS 2871700 2872335 . - 0 ID=cds-WP_221068244.1;Parent=gene-VA249_RS13230;Dbxref=Genbank:WP_221068244.1;Name=WP_221068244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001883957.1;locus_tag=VA249_RS13230;product=sel1 repeat family protein;protein_id=WP_221068244.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2872564 2873880 . - . ID=gene-VA249_RS13235;Name=VA249_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13235;old_locus_tag=VYA_24880 NZ_AP024165.1 Protein Homology CDS 2872564 2873880 . - 0 ID=cds-WP_128809971.1;Parent=gene-VA249_RS13235;Dbxref=Genbank:WP_128809971.1;Name=WP_128809971.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016798299.1;locus_tag=VA249_RS13235;product=adenylosuccinate synthase;protein_id=WP_128809971.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2874054 2874239 . + . ID=gene-VA249_RS13240;Name=VA249_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13240;old_locus_tag=VYA_24890 NZ_AP024165.1 Protein Homology CDS 2874054 2874239 . + 0 ID=cds-WP_128809970.1;Parent=gene-VA249_RS13240;Dbxref=Genbank:WP_128809970.1;Name=WP_128809970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432777.1;locus_tag=VA249_RS13240;product=DUF2065 domain-containing protein;protein_id=WP_128809970.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2874311 2875291 . - . ID=gene-VA249_RS13245;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=VA249_RS13245;old_locus_tag=VYA_24900 NZ_AP024165.1 Protein Homology CDS 2874311 2875291 . - 0 ID=cds-WP_221068245.1;Parent=gene-VA249_RS13245;Dbxref=Genbank:WP_221068245.1;Name=WP_221068245.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697541.1;locus_tag=VA249_RS13245;product=protease modulator HflC;protein_id=WP_221068245.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2875294 2876493 . - . ID=gene-VA249_RS13250;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=VA249_RS13250;old_locus_tag=VYA_24910 NZ_AP024165.1 Protein Homology CDS 2875294 2876493 . - 0 ID=cds-WP_128809968.1;Parent=gene-VA249_RS13250;Dbxref=Genbank:WP_128809968.1;Name=WP_128809968.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312456.1;locus_tag=VA249_RS13250;product=FtsH protease activity modulator HflK;protein_id=WP_128809968.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2876539 2877828 . - . ID=gene-VA249_RS13255;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=VA249_RS13255;old_locus_tag=VYA_24920 NZ_AP024165.1 Protein Homology CDS 2876539 2877828 . - 0 ID=cds-WP_221068246.1;Parent=gene-VA249_RS13255;Dbxref=Genbank:WP_221068246.1;Name=WP_221068246.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460368.1;locus_tag=VA249_RS13255;product=GTPase HflX;protein_id=WP_221068246.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2877867 2878130 . - . ID=gene-VA249_RS13260;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=VA249_RS13260;old_locus_tag=VYA_24930 NZ_AP024165.1 Protein Homology CDS 2877867 2878130 . - 0 ID=cds-WP_005438329.1;Parent=gene-VA249_RS13260;Dbxref=Genbank:WP_005438329.1;Name=WP_005438329.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051872.1;locus_tag=VA249_RS13260;product=RNA chaperone Hfq;protein_id=WP_005438329.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2878326 2879258 . - . ID=gene-VA249_RS13265;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=VA249_RS13265;old_locus_tag=VYA_24940 NZ_AP024165.1 Protein Homology CDS 2878326 2879258 . - 0 ID=cds-WP_211915827.1;Parent=gene-VA249_RS13265;Dbxref=Genbank:WP_211915827.1;Name=WP_211915827.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017632703.1;locus_tag=VA249_RS13265;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_211915827.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2879255 2881273 . - . ID=gene-VA249_RS13270;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=VA249_RS13270;old_locus_tag=VYA_24950 NZ_AP024165.1 Protein Homology CDS 2879255 2881273 . - 0 ID=cds-WP_221068247.1;Parent=gene-VA249_RS13270;Dbxref=Genbank:WP_221068247.1;Name=WP_221068247.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819685.1;locus_tag=VA249_RS13270;product=DNA mismatch repair endonuclease MutL;protein_id=WP_221068247.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2881292 2883019 . - . ID=gene-VA249_RS13275;Name=VA249_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13275;old_locus_tag=VYA_24960 NZ_AP024165.1 Protein Homology CDS 2881292 2883019 . - 0 ID=cds-WP_221068248.1;Parent=gene-VA249_RS13275;Dbxref=Genbank:WP_221068248.1;Name=WP_221068248.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451397.1;locus_tag=VA249_RS13275;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_221068248.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2883013 2883477 . - . ID=gene-VA249_RS13280;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=VA249_RS13280;old_locus_tag=VYA_24970 NZ_AP024165.1 Protein Homology CDS 2883013 2883477 . - 0 ID=cds-WP_128809964.1;Parent=gene-VA249_RS13280;Dbxref=Genbank:WP_128809964.1;Name=WP_128809964.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705477.1;locus_tag=VA249_RS13280;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_128809964.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2883761 2884888 . + . ID=gene-VA249_RS13285;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=VA249_RS13285;old_locus_tag=VYA_24980 NZ_AP024165.1 Protein Homology CDS 2883761 2884888 . + 0 ID=cds-WP_221068249.1;Parent=gene-VA249_RS13285;Dbxref=Genbank:WP_221068249.1;Name=WP_221068249.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196230.1;locus_tag=VA249_RS13285;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_221068249.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2885500 2885576 . - . ID=gene-VA249_RS13290;Name=VA249_RS13290;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13290;old_locus_tag=VYA_t00870 NZ_AP024165.1 tRNAscan-SE tRNA 2885500 2885576 . - . ID=rna-VA249_RS13290;Parent=gene-VA249_RS13290;anticodon=(pos:complement(2885540..2885542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13290;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 2885500 2885576 . - . ID=exon-VA249_RS13290-1;Parent=rna-VA249_RS13290;anticodon=(pos:complement(2885540..2885542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13290;product=tRNA-Met NZ_AP024165.1 RefSeq gene 2885661 2885737 . - . ID=gene-VA249_RS13295;Name=VA249_RS13295;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13295;old_locus_tag=VYA_t00880 NZ_AP024165.1 tRNAscan-SE tRNA 2885661 2885737 . - . ID=rna-VA249_RS13295;Parent=gene-VA249_RS13295;anticodon=(pos:complement(2885701..2885703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13295;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 2885661 2885737 . - . ID=exon-VA249_RS13295-1;Parent=rna-VA249_RS13295;anticodon=(pos:complement(2885701..2885703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13295;product=tRNA-Met NZ_AP024165.1 RefSeq gene 2885792 2885867 . - . ID=gene-VA249_RS13300;Name=VA249_RS13300;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13300;old_locus_tag=VYA_t00890 NZ_AP024165.1 tRNAscan-SE tRNA 2885792 2885867 . - . ID=rna-VA249_RS13300;Parent=gene-VA249_RS13300;anticodon=(pos:complement(2885832..2885834));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13300;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2885792 2885867 . - . ID=exon-VA249_RS13300-1;Parent=rna-VA249_RS13300;anticodon=(pos:complement(2885832..2885834));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13300;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2885920 2885996 . - . ID=gene-VA249_RS13305;Name=VA249_RS13305;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13305;old_locus_tag=VYA_t00900 NZ_AP024165.1 tRNAscan-SE tRNA 2885920 2885996 . - . ID=rna-VA249_RS13305;Parent=gene-VA249_RS13305;anticodon=(pos:complement(2885960..2885962));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13305;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 2885920 2885996 . - . ID=exon-VA249_RS13305-1;Parent=rna-VA249_RS13305;anticodon=(pos:complement(2885960..2885962));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13305;product=tRNA-Met NZ_AP024165.1 RefSeq gene 2886105 2886180 . - . ID=gene-VA249_RS13310;Name=VA249_RS13310;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13310;old_locus_tag=VYA_t00910 NZ_AP024165.1 tRNAscan-SE tRNA 2886105 2886180 . - . ID=rna-VA249_RS13310;Parent=gene-VA249_RS13310;anticodon=(pos:complement(2886145..2886147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13310;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2886105 2886180 . - . ID=exon-VA249_RS13310-1;Parent=rna-VA249_RS13310;anticodon=(pos:complement(2886145..2886147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13310;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2886216 2886291 . - . ID=gene-VA249_RS13315;Name=VA249_RS13315;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13315;old_locus_tag=VYA_t00920 NZ_AP024165.1 tRNAscan-SE tRNA 2886216 2886291 . - . ID=rna-VA249_RS13315;Parent=gene-VA249_RS13315;anticodon=(pos:complement(2886256..2886258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13315;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2886216 2886291 . - . ID=exon-VA249_RS13315-1;Parent=rna-VA249_RS13315;anticodon=(pos:complement(2886256..2886258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13315;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2886341 2886416 . - . ID=gene-VA249_RS13320;Name=VA249_RS13320;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13320;old_locus_tag=VYA_t00930 NZ_AP024165.1 tRNAscan-SE tRNA 2886341 2886416 . - . ID=rna-VA249_RS13320;Parent=gene-VA249_RS13320;anticodon=(pos:complement(2886381..2886383));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13320;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2886341 2886416 . - . ID=exon-VA249_RS13320-1;Parent=rna-VA249_RS13320;anticodon=(pos:complement(2886381..2886383));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13320;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2886465 2886540 . - . ID=gene-VA249_RS13325;Name=VA249_RS13325;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13325;old_locus_tag=VYA_t00940 NZ_AP024165.1 tRNAscan-SE tRNA 2886465 2886540 . - . ID=rna-VA249_RS13325;Parent=gene-VA249_RS13325;anticodon=(pos:complement(2886505..2886507));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13325;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2886465 2886540 . - . ID=exon-VA249_RS13325-1;Parent=rna-VA249_RS13325;anticodon=(pos:complement(2886505..2886507));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13325;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2886593 2886669 . - . ID=gene-VA249_RS13330;Name=VA249_RS13330;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13330;old_locus_tag=VYA_t00950 NZ_AP024165.1 tRNAscan-SE tRNA 2886593 2886669 . - . ID=rna-VA249_RS13330;Parent=gene-VA249_RS13330;anticodon=(pos:complement(2886633..2886635));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13330;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 2886593 2886669 . - . ID=exon-VA249_RS13330-1;Parent=rna-VA249_RS13330;anticodon=(pos:complement(2886633..2886635));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13330;product=tRNA-Met NZ_AP024165.1 RefSeq gene 2886724 2886799 . - . ID=gene-VA249_RS13335;Name=VA249_RS13335;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13335;old_locus_tag=VYA_t00960 NZ_AP024165.1 tRNAscan-SE tRNA 2886724 2886799 . - . ID=rna-VA249_RS13335;Parent=gene-VA249_RS13335;anticodon=(pos:complement(2886764..2886766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13335;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2886724 2886799 . - . ID=exon-VA249_RS13335-1;Parent=rna-VA249_RS13335;anticodon=(pos:complement(2886764..2886766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13335;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2886852 2886928 . - . ID=gene-VA249_RS13340;Name=VA249_RS13340;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13340;old_locus_tag=VYA_t00970 NZ_AP024165.1 tRNAscan-SE tRNA 2886852 2886928 . - . ID=rna-VA249_RS13340;Parent=gene-VA249_RS13340;anticodon=(pos:complement(2886892..2886894));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13340;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 2886852 2886928 . - . ID=exon-VA249_RS13340-1;Parent=rna-VA249_RS13340;anticodon=(pos:complement(2886892..2886894));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13340;product=tRNA-Met NZ_AP024165.1 RefSeq gene 2886983 2887058 . - . ID=gene-VA249_RS13345;Name=VA249_RS13345;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13345;old_locus_tag=VYA_t00980 NZ_AP024165.1 tRNAscan-SE tRNA 2886983 2887058 . - . ID=rna-VA249_RS13345;Parent=gene-VA249_RS13345;anticodon=(pos:complement(2887023..2887025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13345;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2886983 2887058 . - . ID=exon-VA249_RS13345-1;Parent=rna-VA249_RS13345;anticodon=(pos:complement(2887023..2887025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13345;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2887111 2887187 . - . ID=gene-VA249_RS13350;Name=VA249_RS13350;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13350;old_locus_tag=VYA_t00990 NZ_AP024165.1 tRNAscan-SE tRNA 2887111 2887187 . - . ID=rna-VA249_RS13350;Parent=gene-VA249_RS13350;anticodon=(pos:complement(2887151..2887153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13350;product=tRNA-Met NZ_AP024165.1 tRNAscan-SE exon 2887111 2887187 . - . ID=exon-VA249_RS13350-1;Parent=rna-VA249_RS13350;anticodon=(pos:complement(2887151..2887153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13350;product=tRNA-Met NZ_AP024165.1 RefSeq gene 2887243 2887318 . - . ID=gene-VA249_RS13355;Name=VA249_RS13355;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13355;old_locus_tag=VYA_t01000 NZ_AP024165.1 tRNAscan-SE tRNA 2887243 2887318 . - . ID=rna-VA249_RS13355;Parent=gene-VA249_RS13355;anticodon=(pos:complement(2887283..2887285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13355;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 2887243 2887318 . - . ID=exon-VA249_RS13355-1;Parent=rna-VA249_RS13355;anticodon=(pos:complement(2887283..2887285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13355;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 2887475 2888020 . - . ID=gene-VA249_RS13360;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=VA249_RS13360;old_locus_tag=VYA_24990 NZ_AP024165.1 Protein Homology CDS 2887475 2888020 . - 0 ID=cds-WP_128809962.1;Parent=gene-VA249_RS13360;Dbxref=Genbank:WP_128809962.1;Name=WP_128809962.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005456987.1;locus_tag=VA249_RS13360;product=oligoribonuclease;protein_id=WP_128809962.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2888150 2889214 . + . ID=gene-VA249_RS13365;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=VA249_RS13365;old_locus_tag=VYA_25000 NZ_AP024165.1 Protein Homology CDS 2888150 2889214 . + 0 ID=cds-WP_221068250.1;Parent=gene-VA249_RS13365;Dbxref=Genbank:WP_221068250.1;Name=WP_221068250.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162648.1;locus_tag=VA249_RS13365;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_221068250.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2889331 2890188 . + . ID=gene-VA249_RS13370;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=VA249_RS13370;old_locus_tag=VYA_25010 NZ_AP024165.1 Protein Homology CDS 2889331 2890188 . + 0 ID=cds-WP_221068251.1;Parent=gene-VA249_RS13370;Dbxref=Genbank:WP_221068251.1;Name=WP_221068251.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843391.1;locus_tag=VA249_RS13370;product=archaetidylserine decarboxylase;protein_id=WP_221068251.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2890456 2892534 . + . ID=gene-VA249_RS13375;Name=VA249_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13375;old_locus_tag=VYA_25020 NZ_AP024165.1 Protein Homology CDS 2890456 2892534 . + 0 ID=cds-WP_221068252.1;Parent=gene-VA249_RS13375;Dbxref=Genbank:WP_221068252.1;Name=WP_221068252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707842.1;locus_tag=VA249_RS13375;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_221068252.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2892709 2894124 . + . ID=gene-VA249_RS13380;Name=VA249_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13380;old_locus_tag=VYA_25030 NZ_AP024165.1 Protein Homology CDS 2892709 2894124 . + 0 ID=cds-WP_221068253.1;Parent=gene-VA249_RS13380;Dbxref=Genbank:WP_221068253.1;Name=WP_221068253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425060.1;locus_tag=VA249_RS13380;product=SLC13 family permease;protein_id=WP_221068253.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2894402 2896282 . + . ID=gene-VA249_RS13385;Name=VA249_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13385;old_locus_tag=VYA_25040 NZ_AP024165.1 Protein Homology CDS 2894402 2896282 . + 0 ID=cds-WP_221068254.1;Parent=gene-VA249_RS13385;Dbxref=Genbank:WP_221068254.1;Name=WP_221068254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017631309.1;locus_tag=VA249_RS13385;product=methyl-accepting chemotaxis protein;protein_id=WP_221068254.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2896395 2897831 . - . ID=gene-VA249_RS13390;Name=VA249_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13390;old_locus_tag=VYA_25050 NZ_AP024165.1 Protein Homology CDS 2896395 2897831 . - 0 ID=cds-WP_221067583.1-11;Parent=gene-VA249_RS13390;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS13390;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2898017 2898904 . + . ID=gene-VA249_RS13395;Name=VA249_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13395;old_locus_tag=VYA_25060 NZ_AP024165.1 Protein Homology CDS 2898017 2898904 . + 0 ID=cds-WP_221068255.1;Parent=gene-VA249_RS13395;Dbxref=Genbank:WP_221068255.1;Name=WP_221068255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698888.1;locus_tag=VA249_RS13395;product=DMT family transporter;protein_id=WP_221068255.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2898997 2900529 . - . ID=gene-VA249_RS13400;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=VA249_RS13400;old_locus_tag=VYA_25070 NZ_AP024165.1 Protein Homology CDS 2898997 2900529 . - 0 ID=cds-WP_221068256.1;Parent=gene-VA249_RS13400;Dbxref=Genbank:WP_221068256.1;Name=WP_221068256.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008078218.1;locus_tag=VA249_RS13400;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_221068256.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2901016 2901450 . + . ID=gene-VA249_RS13405;Name=VA249_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13405;old_locus_tag=VYA_25080 NZ_AP024165.1 Protein Homology CDS 2901016 2901450 . + 0 ID=cds-WP_128809955.1;Parent=gene-VA249_RS13405;Dbxref=Genbank:WP_128809955.1;Name=WP_128809955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530941.1;locus_tag=VA249_RS13405;product=rhodanese-like domain-containing protein;protein_id=WP_128809955.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2901652 2902116 . + . ID=gene-VA249_RS13410;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=VA249_RS13410;old_locus_tag=VYA_25090 NZ_AP024165.1 Protein Homology CDS 2901652 2902116 . + 0 ID=cds-WP_221068257.1;Parent=gene-VA249_RS13410;Dbxref=Genbank:WP_221068257.1;Name=WP_221068257.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079263.1;locus_tag=VA249_RS13410;product=protein-export chaperone SecB;protein_id=WP_221068257.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2902317 2903354 . + . ID=gene-VA249_RS13415;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=VA249_RS13415;old_locus_tag=VYA_25100 NZ_AP024165.1 Protein Homology CDS 2902317 2903354 . + 0 ID=cds-WP_128809953.1;Parent=gene-VA249_RS13415;Dbxref=Genbank:WP_128809953.1;Name=WP_128809953.1;Ontology_term=GO:0006072,GO:0004367;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635570.1;locus_tag=VA249_RS13415;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_128809953.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2903433 2904254 . + . ID=gene-VA249_RS13420;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=VA249_RS13420;old_locus_tag=VYA_25110 NZ_AP024165.1 Protein Homology CDS 2903433 2904254 . + 0 ID=cds-WP_128809952.1;Parent=gene-VA249_RS13420;Dbxref=Genbank:WP_128809952.1;Name=WP_128809952.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233221.1;locus_tag=VA249_RS13420;product=serine O-acetyltransferase;protein_id=WP_128809952.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2904280 2905428 . + . ID=gene-VA249_RS13425;Name=VA249_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13425;old_locus_tag=VYA_25120 NZ_AP024165.1 Protein Homology CDS 2904280 2905428 . + 0 ID=cds-WP_221069956.1;Parent=gene-VA249_RS13425;Dbxref=Genbank:WP_221069956.1;Name=WP_221069956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819690.1;locus_tag=VA249_RS13425;product=murein hydrolase activator EnvC;protein_id=WP_221069956.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2905556 2906512 . - . ID=gene-VA249_RS13430;Name=VA249_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13430;old_locus_tag=VYA_25130 NZ_AP024165.1 Protein Homology CDS 2905556 2906512 . - 0 ID=cds-WP_221068258.1;Parent=gene-VA249_RS13430;Dbxref=Genbank:WP_221068258.1;Name=WP_221068258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530933.1;locus_tag=VA249_RS13430;product=DHH family phosphoesterase;protein_id=WP_221068258.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2906650 2907285 . - . ID=gene-VA249_RS13435;Name=VA249_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13435;old_locus_tag=VYA_25140 NZ_AP024165.1 Protein Homology CDS 2906650 2907285 . - 0 ID=cds-WP_221068259.1;Parent=gene-VA249_RS13435;Dbxref=Genbank:WP_221068259.1;Name=WP_221068259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530932.1;locus_tag=VA249_RS13435;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221068259.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2907307 2907681 . - . ID=gene-VA249_RS13440;Name=VA249_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13440;old_locus_tag=VYA_25150 NZ_AP024165.1 Protein Homology CDS 2907307 2907681 . - 0 ID=cds-WP_128809949.1;Parent=gene-VA249_RS13440;Dbxref=Genbank:WP_128809949.1;Name=WP_128809949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440486.1;locus_tag=VA249_RS13440;product=VanZ family protein;protein_id=WP_128809949.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2907691 2908662 . - . ID=gene-VA249_RS13445;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=VA249_RS13445;old_locus_tag=VYA_25160 NZ_AP024165.1 Protein Homology CDS 2907691 2908662 . - 0 ID=cds-WP_221068260.1;Parent=gene-VA249_RS13445;Dbxref=Genbank:WP_221068260.1;Name=WP_221068260.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079255.1;locus_tag=VA249_RS13445;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_221068260.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2909112 2910932 . + . ID=gene-VA249_RS13450;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=VA249_RS13450;old_locus_tag=VYA_25170 NZ_AP024165.1 Protein Homology CDS 2909112 2910932 . + 0 ID=cds-WP_221068261.1;Parent=gene-VA249_RS13450;Dbxref=Genbank:WP_221068261.1;Name=WP_221068261.1;Ontology_term=GO:0009061,GO:0000104;gbkey=CDS;gene=frdA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009847916.1;locus_tag=VA249_RS13450;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_221068261.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2910932 2911690 . + . ID=gene-VA249_RS13455;Name=VA249_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13455;old_locus_tag=VYA_25180 NZ_AP024165.1 Protein Homology CDS 2910932 2911690 . + 0 ID=cds-WP_221068262.1;Parent=gene-VA249_RS13455;Dbxref=Genbank:WP_221068262.1;Name=WP_221068262.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079253.1;locus_tag=VA249_RS13455;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_221068262.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2911693 2912076 . + . ID=gene-VA249_RS13460;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=VA249_RS13460;old_locus_tag=VYA_25190 NZ_AP024165.1 Protein Homology CDS 2911693 2912076 . + 0 ID=cds-WP_128809945.1;Parent=gene-VA249_RS13460;Dbxref=Genbank:WP_128809945.1;Name=WP_128809945.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005381491.1;locus_tag=VA249_RS13460;product=fumarate reductase subunit FrdC;protein_id=WP_128809945.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2912089 2912466 . + . ID=gene-VA249_RS13465;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=VA249_RS13465;old_locus_tag=VYA_25200 NZ_AP024165.1 Protein Homology CDS 2912089 2912466 . + 0 ID=cds-WP_211915809.1;Parent=gene-VA249_RS13465;Dbxref=Genbank:WP_211915809.1;Name=WP_211915809.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020336199.1;locus_tag=VA249_RS13465;product=fumarate reductase subunit FrdD;protein_id=WP_211915809.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2912585 2913151 . - . ID=gene-VA249_RS13470;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=VA249_RS13470;old_locus_tag=VYA_25210 NZ_AP024165.1 Protein Homology CDS 2912585 2913151 . - 0 ID=cds-WP_128809943.1;Parent=gene-VA249_RS13470;Dbxref=Genbank:WP_128809943.1;Name=WP_128809943.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005381500.1;locus_tag=VA249_RS13470;product=elongation factor P;protein_id=WP_128809943.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2913184 2914206 . + . ID=gene-VA249_RS13475;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=VA249_RS13475;old_locus_tag=VYA_25220 NZ_AP024165.1 Protein Homology CDS 2913184 2914206 . + 0 ID=cds-WP_221068263.1;Parent=gene-VA249_RS13475;Dbxref=Genbank:WP_221068263.1;Name=WP_221068263.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120174.1;locus_tag=VA249_RS13475;product=EF-P beta-lysylation protein EpmB;protein_id=WP_221068263.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2914303 2914800 . + . ID=gene-VA249_RS13480;Name=VA249_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13480;old_locus_tag=VYA_25230 NZ_AP024165.1 Protein Homology CDS 2914303 2914800 . + 0 ID=cds-WP_221068264.1;Parent=gene-VA249_RS13480;Dbxref=Genbank:WP_221068264.1;Name=WP_221068264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425045.1;locus_tag=VA249_RS13480;product=MgtC/SapB family protein;protein_id=WP_221068264.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2914900 2915463 . - . ID=gene-VA249_RS13485;Name=VA249_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13485;old_locus_tag=VYA_25240 NZ_AP024165.1 Protein Homology CDS 2914900 2915463 . - 0 ID=cds-WP_221068265.1;Parent=gene-VA249_RS13485;Dbxref=Genbank:WP_221068265.1;Name=WP_221068265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821829.1;locus_tag=VA249_RS13485;product=phaC PHA synthase;protein_id=WP_221068265.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2915911 2917554 . - . ID=gene-VA249_RS13490;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=VA249_RS13490;old_locus_tag=VYA_25250 NZ_AP024165.1 Protein Homology CDS 2915911 2917554 . - 0 ID=cds-WP_221068266.1;Parent=gene-VA249_RS13490;Dbxref=Genbank:WP_221068266.1;Name=WP_221068266.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017079119.1;locus_tag=VA249_RS13490;product=chaperonin GroEL;protein_id=WP_221068266.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2917628 2917918 . - . ID=gene-VA249_RS13495;Name=VA249_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13495;old_locus_tag=VYA_25260 NZ_AP024165.1 Protein Homology CDS 2917628 2917918 . - 0 ID=cds-WP_069490608.1;Parent=gene-VA249_RS13495;Dbxref=Genbank:WP_069490608.1;Name=WP_069490608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843368.1;locus_tag=VA249_RS13495;product=co-chaperone GroES;protein_id=WP_069490608.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2918147 2919526 . + . ID=gene-VA249_RS13500;Name=VA249_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13500;old_locus_tag=VYA_25270 NZ_AP024165.1 Protein Homology CDS 2918147 2919526 . + 0 ID=cds-WP_221068267.1;Parent=gene-VA249_RS13500;Dbxref=Genbank:WP_221068267.1;Name=WP_221068267.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194827.1;locus_tag=VA249_RS13500;product=MATE family efflux transporter;protein_id=WP_221068267.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2919640 2920602 . - . ID=gene-VA249_RS13505;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=VA249_RS13505;old_locus_tag=VYA_25280 NZ_AP024165.1 Protein Homology CDS 2919640 2920602 . - 0 ID=cds-WP_128809937.1;Parent=gene-VA249_RS13505;Dbxref=Genbank:WP_128809937.1;Name=WP_128809937.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233238.1;locus_tag=VA249_RS13505;product=6-phosphofructokinase;protein_id=WP_128809937.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2920888 2921796 . - . ID=gene-VA249_RS13510;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=VA249_RS13510;old_locus_tag=VYA_25290 NZ_AP024165.1 Protein Homology CDS 2920888 2921796 . - 0 ID=cds-WP_221068268.1;Parent=gene-VA249_RS13510;Dbxref=Genbank:WP_221068268.1;Name=WP_221068268.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016021;gbkey=CDS;gene=fieF;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425026.1;locus_tag=VA249_RS13510;product=CDF family cation-efflux transporter FieF;protein_id=WP_221068268.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2921919 2922431 . - . ID=gene-VA249_RS13515;Name=VA249_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13515;old_locus_tag=VYA_25300 NZ_AP024165.1 Protein Homology CDS 2921919 2922431 . - 0 ID=cds-WP_221068269.1;Parent=gene-VA249_RS13515;Dbxref=Genbank:WP_221068269.1;Name=WP_221068269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698897.1;locus_tag=VA249_RS13515;product=CpxP family protein;protein_id=WP_221068269.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2922622 2923311 . + . ID=gene-VA249_RS13520;Name=VA249_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13520;old_locus_tag=VYA_25310 NZ_AP024165.1 Protein Homology CDS 2922622 2923311 . + 0 ID=cds-WP_128809934.1;Parent=gene-VA249_RS13520;Dbxref=Genbank:WP_128809934.1;Name=WP_128809934.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019821535.1;locus_tag=VA249_RS13520;product=response regulator;protein_id=WP_128809934.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2923311 2924714 . + . ID=gene-VA249_RS13525;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=VA249_RS13525;old_locus_tag=VYA_25320 NZ_AP024165.1 Protein Homology CDS 2923311 2924714 . + 0 ID=cds-WP_221068270.1;Parent=gene-VA249_RS13525;Dbxref=Genbank:WP_221068270.1;Name=WP_221068270.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455264.1;locus_tag=VA249_RS13525;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_221068270.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2924869 2925348 . + . ID=gene-VA249_RS13530;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=VA249_RS13530;old_locus_tag=VYA_25330 NZ_AP024165.1 Protein Homology CDS 2924869 2925348 . + 0 ID=cds-WP_128809932.1;Parent=gene-VA249_RS13530;Dbxref=Genbank:WP_128809932.1;Name=WP_128809932.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019821538.1;locus_tag=VA249_RS13530;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_128809932.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2925420 2925938 . - . ID=gene-VA249_RS13535;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=VA249_RS13535;old_locus_tag=VYA_25340 NZ_AP024165.1 Protein Homology CDS 2925420 2925938 . - 0 ID=cds-WP_221068271.1;Parent=gene-VA249_RS13535;Dbxref=Genbank:WP_221068271.1;Name=WP_221068271.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194823.1;locus_tag=VA249_RS13535;product=membrane protein FxsA;protein_id=WP_221068271.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2926396 2927847 . + . ID=gene-VA249_RS13540;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=VA249_RS13540;old_locus_tag=VYA_25350 NZ_AP024165.1 Protein Homology CDS 2926396 2927847 . + 0 ID=cds-WP_128809930.1;Parent=gene-VA249_RS13540;Dbxref=Genbank:WP_128809930.1;Name=WP_128809930.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963249.1;locus_tag=VA249_RS13540;product=aspartate ammonia-lyase;protein_id=WP_128809930.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2928025 2929332 . + . ID=gene-VA249_RS13545;Name=VA249_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13545;old_locus_tag=VYA_25360 NZ_AP024165.1 Protein Homology CDS 2928025 2929332 . + 0 ID=cds-WP_128809929.1;Parent=gene-VA249_RS13545;Dbxref=Genbank:WP_128809929.1;Name=WP_128809929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001965863.1;locus_tag=VA249_RS13545;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_128809929.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2929495 2931330 . + . ID=gene-VA249_RS13550;Name=VA249_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13550;old_locus_tag=VYA_25370 NZ_AP024165.1 Protein Homology CDS 2929495 2931330 . + 0 ID=cds-WP_221068272.1;Parent=gene-VA249_RS13550;Dbxref=Genbank:WP_221068272.1;Name=WP_221068272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448276.1;locus_tag=VA249_RS13550;product=protein-disulfide reductase DsbD;protein_id=WP_221068272.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2931524 2932159 . + . ID=gene-VA249_RS13555;Name=VA249_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13555;old_locus_tag=VYA_25380 NZ_AP024165.1 Protein Homology CDS 2931524 2932159 . + 0 ID=cds-WP_211915797.1;Parent=gene-VA249_RS13555;Dbxref=Genbank:WP_211915797.1;Name=WP_211915797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079231.1;locus_tag=VA249_RS13555;product=response regulator transcription factor;protein_id=WP_211915797.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2932380 2933003 . + . ID=gene-VA249_RS13560;Name=VA249_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13560;old_locus_tag=VYA_25390 NZ_AP024165.1 Protein Homology CDS 2932380 2933003 . + 0 ID=cds-WP_221068273.1;Parent=gene-VA249_RS13560;Dbxref=Genbank:WP_221068273.1;Name=WP_221068273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079230.1;locus_tag=VA249_RS13560;product=MarC family protein;protein_id=WP_221068273.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2933208 2933474 . + . ID=gene-VA249_RS13565;Name=VA249_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13565;old_locus_tag=VYA_25400 NZ_AP024165.1 Protein Homology CDS 2933208 2933474 . + 0 ID=cds-WP_128809925.1;Parent=gene-VA249_RS13565;Dbxref=Genbank:WP_128809925.1;Name=WP_128809925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017007870.1;locus_tag=VA249_RS13565;product=DUF4212 domain-containing protein;protein_id=WP_128809925.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2933487 2935214 . + . ID=gene-VA249_RS13570;Name=VA249_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13570;old_locus_tag=VYA_25410 NZ_AP024165.1 Protein Homology CDS 2933487 2935214 . + 0 ID=cds-WP_221068274.1;Parent=gene-VA249_RS13570;Dbxref=Genbank:WP_221068274.1;Name=WP_221068274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428788.1;locus_tag=VA249_RS13570;product=cation acetate symporter;protein_id=WP_221068274.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2935428 2935910 . + . ID=gene-VA249_RS13575;Name=VA249_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13575;old_locus_tag=VYA_25420 NZ_AP024165.1 Protein Homology CDS 2935428 2935910 . + 0 ID=cds-WP_221068275.1;Parent=gene-VA249_RS13575;Dbxref=Genbank:WP_221068275.1;Name=WP_221068275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006878346.1;locus_tag=VA249_RS13575;product=hypothetical protein;protein_id=WP_221068275.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2935964 2939395 . - . ID=gene-VA249_RS13580;Name=VA249_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13580;old_locus_tag=VYA_25430 NZ_AP024165.1 Protein Homology CDS 2935964 2939395 . - 0 ID=cds-WP_221068276.1;Parent=gene-VA249_RS13580;Dbxref=Genbank:WP_221068276.1;Name=WP_221068276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644784.1;locus_tag=VA249_RS13580;product=PAS-domain containing protein;protein_id=WP_221068276.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2939532 2940722 . - . ID=gene-VA249_RS13585;Name=VA249_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13585;old_locus_tag=VYA_25440 NZ_AP024165.1 Protein Homology CDS 2939532 2940722 . - 0 ID=cds-WP_221068277.1;Parent=gene-VA249_RS13585;Dbxref=Genbank:WP_221068277.1;Name=WP_221068277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844527.1;locus_tag=VA249_RS13585;product=3-phenylpropionate MFS transporter;protein_id=WP_221068277.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2940958 2942784 . + . ID=gene-VA249_RS13590;Name=VA249_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13590;old_locus_tag=VYA_25450 NZ_AP024165.1 Protein Homology CDS 2940958 2942784 . + 0 ID=cds-WP_221068279.1;Parent=gene-VA249_RS13590;Dbxref=Genbank:WP_221068279.1;Name=WP_221068279.1;Ontology_term=GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020336222.1;locus_tag=VA249_RS13590;product=DUF294 nucleotidyltransferase-like domain-containing protein;protein_id=WP_221068279.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2942820 2943452 . + . ID=gene-VA249_RS13595;Name=VA249_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13595;old_locus_tag=VYA_25460 NZ_AP024165.1 Protein Homology CDS 2942820 2943452 . + 0 ID=cds-WP_221068281.1;Parent=gene-VA249_RS13595;Dbxref=Genbank:WP_221068281.1;Name=WP_221068281.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440406.1;locus_tag=VA249_RS13595;product=3'-5' exonuclease;protein_id=WP_221068281.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2943688 2945640 . + . ID=gene-VA249_RS13600;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=VA249_RS13600;old_locus_tag=VYA_25470 NZ_AP024165.1 Protein Homology CDS 2943688 2945640 . + 0 ID=cds-WP_128809918.1;Parent=gene-VA249_RS13600;Dbxref=Genbank:WP_128809918.1;Name=WP_128809918.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016790186.1;locus_tag=VA249_RS13600;product=acetate--CoA ligase;protein_id=WP_128809918.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2945947 2946396 . + . ID=gene-VA249_RS13605;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=VA249_RS13605;old_locus_tag=VYA_25480 NZ_AP024165.1 Protein Homology CDS 2945947 2946396 . + 0 ID=cds-WP_221068283.1;Parent=gene-VA249_RS13605;Dbxref=Genbank:WP_221068283.1;Name=WP_221068283.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448261.1;locus_tag=VA249_RS13605;product=type II 3-dehydroquinate dehydratase;protein_id=WP_221068283.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2946456 2946920 . + . ID=gene-VA249_RS13610;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=VA249_RS13610;old_locus_tag=VYA_25490 NZ_AP024165.1 Protein Homology CDS 2946456 2946920 . + 0 ID=cds-WP_221068284.1;Parent=gene-VA249_RS13610;Dbxref=Genbank:WP_221068284.1;Name=WP_221068284.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009707873.1;locus_tag=VA249_RS13610;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_221068284.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2946935 2948278 . + . ID=gene-VA249_RS13615;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=VA249_RS13615;old_locus_tag=VYA_25500 NZ_AP024165.1 Protein Homology CDS 2946935 2948278 . + 0 ID=cds-WP_128809915.1;Parent=gene-VA249_RS13615;Dbxref=Genbank:WP_128809915.1;Name=WP_128809915.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017032939.1;locus_tag=VA249_RS13615;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_128809915.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2948409 2949296 . + . ID=gene-VA249_RS13620;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=VA249_RS13620;old_locus_tag=VYA_25510 NZ_AP024165.1 Protein Homology CDS 2948409 2949296 . + 0 ID=cds-WP_221068286.1;Parent=gene-VA249_RS13620;Dbxref=Genbank:WP_221068286.1;Name=WP_221068286.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012604987.1;locus_tag=VA249_RS13620;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_221068286.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2949436 2950404 . + . ID=gene-VA249_RS13625;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=VA249_RS13625;old_locus_tag=VYA_25520 NZ_AP024165.1 Protein Homology CDS 2949436 2950404 . + 0 ID=cds-WP_164837134.1;Parent=gene-VA249_RS13625;Dbxref=Genbank:WP_164837134.1;Name=WP_164837134.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010320339.1;locus_tag=VA249_RS13625;product=tRNA dihydrouridine synthase DusB;protein_id=WP_164837134.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2950428 2950724 . + . ID=gene-VA249_RS13630;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=VA249_RS13630;old_locus_tag=VYA_25530 NZ_AP024165.1 Protein Homology CDS 2950428 2950724 . + 0 ID=cds-WP_000462885.1;Parent=gene-VA249_RS13630;Dbxref=Genbank:WP_000462885.1;Name=WP_000462885.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=VA249_RS13630;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462885.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2950925 2951914 . + . ID=gene-VA249_RS13635;Name=VA249_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13635;old_locus_tag=VYA_25540 NZ_AP024165.1 Protein Homology CDS 2950925 2951914 . + 0 ID=cds-WP_221068287.1;Parent=gene-VA249_RS13635;Dbxref=Genbank:WP_221068287.1;Name=WP_221068287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440389.1;locus_tag=VA249_RS13635;product=GGDEF domain-containing protein;protein_id=WP_221068287.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2952531 2952647 . - . ID=gene-VA249_RS13640;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS13640;old_locus_tag=VYA_r00200 NZ_AP024165.1 cmsearch rRNA 2952531 2952647 . - . ID=rna-VA249_RS13640;Parent=gene-VA249_RS13640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13640;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2952531 2952647 . - . ID=exon-VA249_RS13640-1;Parent=rna-VA249_RS13640;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13640;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2952778 2955670 . - . ID=gene-VA249_RS13645;Name=VA249_RS13645;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13645;old_locus_tag=VYA_r00210 NZ_AP024165.1 cmsearch rRNA 2952778 2955670 . - . ID=rna-VA249_RS13645;Parent=gene-VA249_RS13645;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13645;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 2952778 2955670 . - . ID=exon-VA249_RS13645-1;Parent=rna-VA249_RS13645;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13645;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 2956040 2956115 . - . ID=gene-VA249_RS13650;Name=VA249_RS13650;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13650;old_locus_tag=VYA_t01010 NZ_AP024165.1 tRNAscan-SE tRNA 2956040 2956115 . - . ID=rna-VA249_RS13650;Parent=gene-VA249_RS13650;anticodon=(pos:complement(2956080..2956082));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13650;product=tRNA-Val NZ_AP024165.1 tRNAscan-SE exon 2956040 2956115 . - . ID=exon-VA249_RS13650-1;Parent=rna-VA249_RS13650;anticodon=(pos:complement(2956080..2956082));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13650;product=tRNA-Val NZ_AP024165.1 RefSeq gene 2956183 2956258 . - . ID=gene-VA249_RS13655;Name=VA249_RS13655;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13655;old_locus_tag=VYA_t01020 NZ_AP024165.1 tRNAscan-SE tRNA 2956183 2956258 . - . ID=rna-VA249_RS13655;Parent=gene-VA249_RS13655;anticodon=(pos:complement(2956223..2956225));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13655;product=tRNA-Lys NZ_AP024165.1 tRNAscan-SE exon 2956183 2956258 . - . ID=exon-VA249_RS13655-1;Parent=rna-VA249_RS13655;anticodon=(pos:complement(2956223..2956225));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13655;product=tRNA-Lys NZ_AP024165.1 RefSeq gene 2956261 2956336 . - . ID=gene-VA249_RS13660;Name=VA249_RS13660;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13660;old_locus_tag=VYA_t01030 NZ_AP024165.1 tRNAscan-SE tRNA 2956261 2956336 . - . ID=rna-VA249_RS13660;Parent=gene-VA249_RS13660;anticodon=(pos:complement(2956300..2956302));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13660;product=tRNA-Glu NZ_AP024165.1 tRNAscan-SE exon 2956261 2956336 . - . ID=exon-VA249_RS13660-1;Parent=rna-VA249_RS13660;anticodon=(pos:complement(2956300..2956302));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13660;product=tRNA-Glu NZ_AP024165.1 RefSeq gene 2956427 2957979 . - . ID=gene-VA249_RS13665;Name=VA249_RS13665;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13665;old_locus_tag=VYA_r00220 NZ_AP024165.1 cmsearch rRNA 2956427 2957979 . - . ID=rna-VA249_RS13665;Parent=gene-VA249_RS13665;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13665;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 2956427 2957979 . - . ID=exon-VA249_RS13665-1;Parent=rna-VA249_RS13665;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13665;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 2958347 2958463 . - . ID=gene-VA249_RS13670;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS13670;old_locus_tag=VYA_r00230 NZ_AP024165.1 cmsearch rRNA 2958347 2958463 . - . ID=rna-VA249_RS13670;Parent=gene-VA249_RS13670;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13670;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2958347 2958463 . - . ID=exon-VA249_RS13670-1;Parent=rna-VA249_RS13670;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13670;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2958555 2961447 . - . ID=gene-VA249_RS13675;Name=VA249_RS13675;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13675;old_locus_tag=VYA_r00240 NZ_AP024165.1 cmsearch rRNA 2958555 2961447 . - . ID=rna-VA249_RS13675;Parent=gene-VA249_RS13675;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13675;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 2958555 2961447 . - . ID=exon-VA249_RS13675-1;Parent=rna-VA249_RS13675;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13675;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 2961754 2961829 . - . ID=gene-VA249_RS13680;Name=VA249_RS13680;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13680;old_locus_tag=VYA_t01040 NZ_AP024165.1 tRNAscan-SE tRNA 2961754 2961829 . - . ID=rna-VA249_RS13680;Parent=gene-VA249_RS13680;anticodon=(pos:complement(2961794..2961796));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13680;product=tRNA-Ala NZ_AP024165.1 tRNAscan-SE exon 2961754 2961829 . - . ID=exon-VA249_RS13680-1;Parent=rna-VA249_RS13680;anticodon=(pos:complement(2961794..2961796));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13680;product=tRNA-Ala NZ_AP024165.1 RefSeq gene 2961870 2961946 . - . ID=gene-VA249_RS13685;Name=VA249_RS13685;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13685;old_locus_tag=VYA_t01050 NZ_AP024165.1 tRNAscan-SE tRNA 2961870 2961946 . - . ID=rna-VA249_RS13685;Parent=gene-VA249_RS13685;anticodon=(pos:complement(2961910..2961912));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13685;product=tRNA-Ile NZ_AP024165.1 tRNAscan-SE exon 2961870 2961946 . - . ID=exon-VA249_RS13685-1;Parent=rna-VA249_RS13685;anticodon=(pos:complement(2961910..2961912));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13685;product=tRNA-Ile NZ_AP024165.1 RefSeq gene 2962014 2963566 . - . ID=gene-VA249_RS13690;Name=VA249_RS13690;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13690;old_locus_tag=VYA_r00250 NZ_AP024165.1 cmsearch rRNA 2962014 2963566 . - . ID=rna-VA249_RS13690;Parent=gene-VA249_RS13690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13690;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 2962014 2963566 . - . ID=exon-VA249_RS13690-1;Parent=rna-VA249_RS13690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13690;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 2963934 2964050 . - . ID=gene-VA249_RS13695;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS13695;old_locus_tag=VYA_r00260 NZ_AP024165.1 cmsearch rRNA 2963934 2964050 . - . ID=rna-VA249_RS13695;Parent=gene-VA249_RS13695;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13695;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 2963934 2964050 . - . ID=exon-VA249_RS13695-1;Parent=rna-VA249_RS13695;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13695;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 2964142 2967034 . - . ID=gene-VA249_RS13700;Name=VA249_RS13700;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13700;old_locus_tag=VYA_r00270 NZ_AP024165.1 cmsearch rRNA 2964142 2967034 . - . ID=rna-VA249_RS13700;Parent=gene-VA249_RS13700;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13700;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 2964142 2967034 . - . ID=exon-VA249_RS13700-1;Parent=rna-VA249_RS13700;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13700;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 2967362 2967437 . - . ID=gene-VA249_RS13705;Name=VA249_RS13705;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13705;old_locus_tag=VYA_t01060 NZ_AP024165.1 tRNAscan-SE tRNA 2967362 2967437 . - . ID=rna-VA249_RS13705;Parent=gene-VA249_RS13705;anticodon=(pos:complement(2967401..2967403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13705;product=tRNA-Glu NZ_AP024165.1 tRNAscan-SE exon 2967362 2967437 . - . ID=exon-VA249_RS13705-1;Parent=rna-VA249_RS13705;anticodon=(pos:complement(2967401..2967403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13705;product=tRNA-Glu NZ_AP024165.1 RefSeq gene 2967527 2969081 . - . ID=gene-VA249_RS13710;Name=VA249_RS13710;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13710;old_locus_tag=VYA_r00280 NZ_AP024165.1 cmsearch rRNA 2967527 2969081 . - . ID=rna-VA249_RS13710;Parent=gene-VA249_RS13710;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13710;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 2967527 2969081 . - . ID=exon-VA249_RS13710-1;Parent=rna-VA249_RS13710;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13710;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 2969945 2972080 . - . ID=gene-VA249_RS13715;Name=VA249_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13715;old_locus_tag=VYA_25580 NZ_AP024165.1 Protein Homology CDS 2969945 2972080 . - 0 ID=cds-WP_221068289.1;Parent=gene-VA249_RS13715;Dbxref=Genbank:WP_221068289.1;Name=WP_221068289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001019828.1;locus_tag=VA249_RS13715;product=lysine decarboxylase CadA;protein_id=WP_221068289.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2972198 2973541 . - . ID=gene-VA249_RS13720;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=VA249_RS13720;old_locus_tag=VYA_25590 NZ_AP024165.1 Protein Homology CDS 2972198 2973541 . - 0 ID=cds-WP_128809910.1;Parent=gene-VA249_RS13720;Dbxref=Genbank:WP_128809910.1;Name=WP_128809910.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017191151.1;locus_tag=VA249_RS13720;product=cadaverine/lysine antiporter;protein_id=WP_128809910.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2974359 2975933 . - . ID=gene-VA249_RS13725;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=VA249_RS13725;old_locus_tag=VYA_25600 NZ_AP024165.1 Protein Homology CDS 2974359 2975933 . - 0 ID=cds-WP_221068290.1;Parent=gene-VA249_RS13725;Dbxref=Genbank:WP_221068290.1;Name=WP_221068290.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579119.1;locus_tag=VA249_RS13725;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_221068290.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2976077 2976487 . - . ID=gene-VA249_RS13730;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=VA249_RS13730;old_locus_tag=VYA_25610 NZ_AP024165.1 Protein Homology CDS 2976077 2976487 . - 0 ID=cds-WP_221068291.1;Parent=gene-VA249_RS13730;Dbxref=Genbank:WP_221068291.1;Name=WP_221068291.1;Ontology_term=GO:0006882,GO:0010043;gbkey=CDS;gene=zntR;go_process=cellular zinc ion homeostasis|0006882||IEA,response to zinc ion|0010043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005594832.1;locus_tag=VA249_RS13730;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_221068291.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2976770 2978377 . + . ID=gene-VA249_RS13735;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=VA249_RS13735;old_locus_tag=VYA_25620 NZ_AP024165.1 Protein Homology CDS 2976770 2978377 . + 0 ID=cds-WP_221068292.1;Parent=gene-VA249_RS13735;Dbxref=Genbank:WP_221068292.1;Name=WP_221068292.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017091565.1;locus_tag=VA249_RS13735;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_221068292.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2978472 2979761 . + . ID=gene-VA249_RS13740;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=VA249_RS13740;old_locus_tag=VYA_25630 NZ_AP024165.1 Protein Homology CDS 2978472 2979761 . + 0 ID=cds-WP_221068297.1;Parent=gene-VA249_RS13740;Dbxref=Genbank:WP_221068297.1;Name=WP_221068297.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705471.1;locus_tag=VA249_RS13740;product=phosphoribosylamine--glycine ligase;protein_id=WP_221068297.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2979890 2981326 . - . ID=gene-VA249_RS13745;Name=VA249_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13745;old_locus_tag=VYA_25640 NZ_AP024165.1 Protein Homology CDS 2979890 2981326 . - 0 ID=cds-WP_221067583.1-12;Parent=gene-VA249_RS13745;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS13745;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2981467 2982165 . - . ID=gene-VA249_RS13750;Name=VA249_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13750;old_locus_tag=VYA_25650 NZ_AP024165.1 Protein Homology CDS 2981467 2982165 . - 0 ID=cds-WP_221068299.1;Parent=gene-VA249_RS13750;Dbxref=Genbank:WP_221068299.1;Name=WP_221068299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433626.1;locus_tag=VA249_RS13750;product=DUF1481 domain-containing protein;protein_id=WP_221068299.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2982205 2982477 . - . ID=gene-VA249_RS13755;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=VA249_RS13755;old_locus_tag=VYA_25660 NZ_AP024165.1 Protein Homology CDS 2982205 2982477 . - 0 ID=cds-WP_005433627.1;Parent=gene-VA249_RS13755;Dbxref=Genbank:WP_005433627.1;Name=WP_005433627.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005421291.1;locus_tag=VA249_RS13755;product=DNA-binding protein HU-alpha;protein_id=WP_005433627.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2982731 2983861 . + . ID=gene-VA249_RS13760;Name=VA249_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13760;old_locus_tag=VYA_25670 NZ_AP024165.1 Protein Homology CDS 2982731 2983861 . + 0 ID=cds-WP_128809905.1;Parent=gene-VA249_RS13760;Dbxref=Genbank:WP_128809905.1;Name=WP_128809905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533812.1;locus_tag=VA249_RS13760;product=hemolysin family protein;protein_id=WP_128809905.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2983981 2985417 . - . ID=gene-VA249_RS13765;Name=VA249_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13765;old_locus_tag=VYA_25680 NZ_AP024165.1 Protein Homology CDS 2983981 2985417 . - 0 ID=cds-WP_221067583.1-13;Parent=gene-VA249_RS13765;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS13765;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2985535 2986122 . - . ID=gene-VA249_RS13770;Name=VA249_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13770;old_locus_tag=VYA_25690 NZ_AP024165.1 Protein Homology CDS 2985535 2986122 . - 0 ID=cds-WP_128809904.1;Parent=gene-VA249_RS13770;Dbxref=Genbank:WP_128809904.1;Name=WP_128809904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004729756.1;locus_tag=VA249_RS13770;product=DUF416 family protein;protein_id=WP_128809904.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2986189 2987112 . + . ID=gene-VA249_RS13775;Name=VA249_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13775;old_locus_tag=VYA_25700 NZ_AP024165.1 Protein Homology CDS 2986189 2987112 . + 0 ID=cds-WP_221068304.1;Parent=gene-VA249_RS13775;Dbxref=Genbank:WP_221068304.1;Name=WP_221068304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817497.1;locus_tag=VA249_RS13775;product=D-2-hydroxyacid dehydrogenase;protein_id=WP_221068304.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2987120 2987692 . + . ID=gene-VA249_RS13780;Name=VA249_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13780;old_locus_tag=VYA_25710 NZ_AP024165.1 Protein Homology CDS 2987120 2987692 . + 0 ID=cds-WP_009697536.1;Parent=gene-VA249_RS13780;Dbxref=Genbank:WP_009697536.1;Name=WP_009697536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433633.1;locus_tag=VA249_RS13780;product=uracil-DNA glycosylase family protein;protein_id=WP_009697536.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2987932 2988999 . - . ID=gene-VA249_RS13785;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=VA249_RS13785;old_locus_tag=VYA_25720 NZ_AP024165.1 Protein Homology CDS 2987932 2988999 . - 0 ID=cds-WP_221068306.1;Parent=gene-VA249_RS13785;Dbxref=Genbank:WP_221068306.1;Name=WP_221068306.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020198117.1;locus_tag=VA249_RS13785;product=uroporphyrinogen decarboxylase;protein_id=WP_221068306.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2989262 2990044 . - . ID=gene-VA249_RS13790;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=VA249_RS13790;old_locus_tag=VYA_25730 NZ_AP024165.1 Protein Homology CDS 2989262 2990044 . - 0 ID=cds-WP_221068308.1;Parent=gene-VA249_RS13790;Dbxref=Genbank:WP_221068308.1;Name=WP_221068308.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449540.1;locus_tag=VA249_RS13790;product=NAD(+) diphosphatase;protein_id=WP_221068308.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2990222 2990713 . + . ID=gene-VA249_RS13795;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=VA249_RS13795;old_locus_tag=VYA_25740 NZ_AP024165.1 Protein Homology CDS 2990222 2990713 . + 0 ID=cds-WP_128812218.1;Parent=gene-VA249_RS13795;Dbxref=Genbank:WP_128812218.1;Name=WP_128812218.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444396.1;locus_tag=VA249_RS13795;product=sigma D regulator;protein_id=WP_128812218.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2990991 2995193 . - . ID=gene-VA249_RS13800;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=VA249_RS13800;old_locus_tag=VYA_25750 NZ_AP024165.1 Protein Homology CDS 2990991 2995193 . - 0 ID=cds-WP_128809899.1;Parent=gene-VA249_RS13800;Dbxref=Genbank:WP_128809899.1;Name=WP_128809899.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444398.1;locus_tag=VA249_RS13800;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_128809899.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2995299 2999327 . - . ID=gene-VA249_RS13805;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=VA249_RS13805;old_locus_tag=VYA_25760 NZ_AP024165.1 Protein Homology CDS 2995299 2999327 . - 0 ID=cds-WP_221068309.1;Parent=gene-VA249_RS13805;Dbxref=Genbank:WP_221068309.1;Name=WP_221068309.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004747613.1;locus_tag=VA249_RS13805;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_221068309.1;transl_table=11 NZ_AP024165.1 RefSeq gene 2999578 2999946 . - . ID=gene-VA249_RS13810;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=VA249_RS13810;old_locus_tag=VYA_25770 NZ_AP024165.1 Protein Homology CDS 2999578 2999946 . - 0 ID=cds-WP_128809897.1;Parent=gene-VA249_RS13810;Dbxref=Genbank:WP_128809897.1;Name=WP_128809897.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005421323.1;locus_tag=VA249_RS13810;product=50S ribosomal protein L7/L12;protein_id=WP_128809897.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3000004 3000498 . - . ID=gene-VA249_RS13815;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=VA249_RS13815;old_locus_tag=VYA_25780 NZ_AP024165.1 Protein Homology CDS 3000004 3000498 . - 0 ID=cds-WP_128809896.1;Parent=gene-VA249_RS13815;Dbxref=Genbank:WP_128809896.1;Name=WP_128809896.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435550.1;locus_tag=VA249_RS13815;product=50S ribosomal protein L10;protein_id=WP_128809896.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3000792 3001493 . - . ID=gene-VA249_RS13820;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=VA249_RS13820;old_locus_tag=VYA_25790 NZ_AP024165.1 Protein Homology CDS 3000792 3001493 . - 0 ID=cds-WP_128809895.1;Parent=gene-VA249_RS13820;Dbxref=Genbank:WP_128809895.1;Name=WP_128809895.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384683.1;locus_tag=VA249_RS13820;product=50S ribosomal protein L1;protein_id=WP_128809895.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3001498 3001926 . - . ID=gene-VA249_RS13825;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=VA249_RS13825;old_locus_tag=VYA_25800 NZ_AP024165.1 Protein Homology CDS 3001498 3001926 . - 0 ID=cds-WP_128809894.1;Parent=gene-VA249_RS13825;Dbxref=Genbank:WP_128809894.1;Name=WP_128809894.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165805.1;locus_tag=VA249_RS13825;product=50S ribosomal protein L11;protein_id=WP_128809894.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3002070 3002618 . - . ID=gene-VA249_RS13830;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=VA249_RS13830;old_locus_tag=VYA_25810 NZ_AP024165.1 Protein Homology CDS 3002070 3002618 . - 0 ID=cds-WP_128809893.1;Parent=gene-VA249_RS13830;Dbxref=Genbank:WP_128809893.1;Name=WP_128809893.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017053177.1;locus_tag=VA249_RS13830;product=transcription termination/antitermination protein NusG;protein_id=WP_128809893.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3002632 3003012 . - . ID=gene-VA249_RS13835;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=VA249_RS13835;old_locus_tag=VYA_25820 NZ_AP024165.1 Protein Homology CDS 3002632 3003012 . - 0 ID=cds-WP_005440549.1;Parent=gene-VA249_RS13835;Dbxref=Genbank:WP_005440549.1;Name=WP_005440549.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004747599.1;locus_tag=VA249_RS13835;product=preprotein translocase subunit SecE;protein_id=WP_005440549.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3003280 3004464 . - . ID=gene-VA249_RS13840;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=VA249_RS13840;old_locus_tag=VYA_25830 NZ_AP024165.1 Protein Homology CDS 3003280 3004464 . - 0 ID=cds-WP_221068231.1-2;Parent=gene-VA249_RS13840;Dbxref=Genbank:WP_221068231.1;Name=WP_221068231.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151305.1;locus_tag=VA249_RS13840;product=elongation factor Tu;protein_id=WP_221068231.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3004566 3004641 . - . ID=gene-VA249_RS13845;Name=VA249_RS13845;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13845;old_locus_tag=VYA_t01070 NZ_AP024165.1 tRNAscan-SE tRNA 3004566 3004641 . - . ID=rna-VA249_RS13845;Parent=gene-VA249_RS13845;anticodon=(pos:complement(3004606..3004608));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13845;product=tRNA-Thr NZ_AP024165.1 tRNAscan-SE exon 3004566 3004641 . - . ID=exon-VA249_RS13845-1;Parent=rna-VA249_RS13845;anticodon=(pos:complement(3004606..3004608));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13845;product=tRNA-Thr NZ_AP024165.1 RefSeq gene 3004655 3004729 . - . ID=gene-VA249_RS13850;Name=VA249_RS13850;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13850;old_locus_tag=VYA_t01080 NZ_AP024165.1 tRNAscan-SE tRNA 3004655 3004729 . - . ID=rna-VA249_RS13850;Parent=gene-VA249_RS13850;anticodon=(pos:complement(3004694..3004696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13850;product=tRNA-Gly NZ_AP024165.1 tRNAscan-SE exon 3004655 3004729 . - . ID=exon-VA249_RS13850-1;Parent=rna-VA249_RS13850;anticodon=(pos:complement(3004694..3004696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13850;product=tRNA-Gly NZ_AP024165.1 RefSeq gene 3004765 3004849 . - . ID=gene-VA249_RS13855;Name=VA249_RS13855;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13855;old_locus_tag=VYA_t01090 NZ_AP024165.1 tRNAscan-SE tRNA 3004765 3004849 . - . ID=rna-VA249_RS13855;Parent=gene-VA249_RS13855;anticodon=(pos:complement(3004813..3004815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13855;product=tRNA-Tyr NZ_AP024165.1 tRNAscan-SE exon 3004765 3004849 . - . ID=exon-VA249_RS13855-1;Parent=rna-VA249_RS13855;anticodon=(pos:complement(3004813..3004815));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13855;product=tRNA-Tyr NZ_AP024165.1 RefSeq gene 3004897 3004972 . - . ID=gene-VA249_RS13860;Name=VA249_RS13860;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13860;old_locus_tag=VYA_t01100 NZ_AP024165.1 tRNAscan-SE tRNA 3004897 3004972 . - . ID=rna-VA249_RS13860;Parent=gene-VA249_RS13860;anticodon=(pos:complement(3004937..3004939));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13860;product=tRNA-Thr NZ_AP024165.1 tRNAscan-SE exon 3004897 3004972 . - . ID=exon-VA249_RS13860-1;Parent=rna-VA249_RS13860;anticodon=(pos:complement(3004937..3004939));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13860;product=tRNA-Thr NZ_AP024165.1 RefSeq gene 3005179 3006102 . + . ID=gene-VA249_RS13865;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=VA249_RS13865;old_locus_tag=VYA_25840 NZ_AP024165.1 Protein Homology CDS 3005179 3006102 . + 0 ID=cds-WP_211915772.1;Parent=gene-VA249_RS13865;Dbxref=Genbank:WP_211915772.1;Name=WP_211915772.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151385.1;locus_tag=VA249_RS13865;product=type I pantothenate kinase;protein_id=WP_211915772.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3006129 3007094 . - . ID=gene-VA249_RS13870;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=VA249_RS13870;old_locus_tag=VYA_25850 NZ_AP024165.1 Protein Homology CDS 3006129 3007094 . - 0 ID=cds-WP_221068310.1;Parent=gene-VA249_RS13870;Dbxref=Genbank:WP_221068310.1;Name=WP_221068310.1;Ontology_term=GO:0006355,GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478002.1;locus_tag=VA249_RS13870;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_221068310.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3007091 3008134 . - . ID=gene-VA249_RS13875;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=VA249_RS13875;old_locus_tag=VYA_25860 NZ_AP024165.1 Protein Homology CDS 3007091 3008134 . - 0 ID=cds-WP_221068312.1;Parent=gene-VA249_RS13875;Dbxref=Genbank:WP_221068312.1;Name=WP_221068312.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650954.1;locus_tag=VA249_RS13875;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_221068312.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3008236 3008667 . + . ID=gene-VA249_RS13880;Name=VA249_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13880;old_locus_tag=VYA_25870 NZ_AP024165.1 Protein Homology CDS 3008236 3008667 . + 0 ID=cds-WP_221069958.1;Parent=gene-VA249_RS13880;Dbxref=Genbank:WP_221069958.1;Name=WP_221069958.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844511.1;locus_tag=VA249_RS13880;product=GNAT family N-acetyltransferase;protein_id=WP_221069958.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3008739 3010079 . + . ID=gene-VA249_RS13885;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=VA249_RS13885;old_locus_tag=VYA_25880 NZ_AP024165.1 Protein Homology CDS 3008739 3010079 . + 0 ID=cds-WP_221068313.1;Parent=gene-VA249_RS13885;Dbxref=Genbank:WP_221068313.1;Name=WP_221068313.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741897.1;locus_tag=VA249_RS13885;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_221068313.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3010330 3010406 . - . ID=gene-VA249_RS13890;Name=VA249_RS13890;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13890;old_locus_tag=VYA_t01110 NZ_AP024165.1 tRNAscan-SE tRNA 3010330 3010406 . - . ID=rna-VA249_RS13890;Parent=gene-VA249_RS13890;anticodon=(pos:complement(3010370..3010372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13890;product=tRNA-Trp NZ_AP024165.1 tRNAscan-SE exon 3010330 3010406 . - . ID=exon-VA249_RS13890-1;Parent=rna-VA249_RS13890;anticodon=(pos:complement(3010370..3010372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13890;product=tRNA-Trp NZ_AP024165.1 RefSeq gene 3010468 3010544 . - . ID=gene-VA249_RS13895;Name=VA249_RS13895;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS13895;old_locus_tag=VYA_t01120 NZ_AP024165.1 tRNAscan-SE tRNA 3010468 3010544 . - . ID=rna-VA249_RS13895;Parent=gene-VA249_RS13895;anticodon=(pos:complement(3010508..3010510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13895;product=tRNA-Asp NZ_AP024165.1 tRNAscan-SE exon 3010468 3010544 . - . ID=exon-VA249_RS13895-1;Parent=rna-VA249_RS13895;anticodon=(pos:complement(3010508..3010510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS13895;product=tRNA-Asp NZ_AP024165.1 RefSeq gene 3010610 3010726 . - . ID=gene-VA249_RS13900;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS13900;old_locus_tag=VYA_r00290 NZ_AP024165.1 cmsearch rRNA 3010610 3010726 . - . ID=rna-VA249_RS13900;Parent=gene-VA249_RS13900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13900;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 3010610 3010726 . - . ID=exon-VA249_RS13900-1;Parent=rna-VA249_RS13900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13900;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 3010819 3013711 . - . ID=gene-VA249_RS13905;Name=VA249_RS13905;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13905;old_locus_tag=VYA_r00300 NZ_AP024165.1 cmsearch rRNA 3010819 3013711 . - . ID=rna-VA249_RS13905;Parent=gene-VA249_RS13905;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13905;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 3010819 3013711 . - . ID=exon-VA249_RS13905-1;Parent=rna-VA249_RS13905;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13905;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 3014075 3015627 . - . ID=gene-VA249_RS13910;Name=VA249_RS13910;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS13910;old_locus_tag=VYA_r00310 NZ_AP024165.1 cmsearch rRNA 3014075 3015627 . - . ID=rna-VA249_RS13910;Parent=gene-VA249_RS13910;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13910;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 3014075 3015627 . - . ID=exon-VA249_RS13910-1;Parent=rna-VA249_RS13910;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS13910;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 3016180 3016635 . + . ID=gene-VA249_RS13915;Name=VA249_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13915;old_locus_tag=VYA_25890 NZ_AP024165.1 Protein Homology CDS 3016180 3016635 . + 0 ID=cds-WP_221068314.1;Parent=gene-VA249_RS13915;Dbxref=Genbank:WP_221068314.1;Name=WP_221068314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444441.1;locus_tag=VA249_RS13915;product=RNA-binding protein;protein_id=WP_221068314.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3016598 3017404 . - . ID=gene-VA249_RS13920;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=VA249_RS13920;old_locus_tag=VYA_25900 NZ_AP024165.1 Protein Homology CDS 3016598 3017404 . - 0 ID=cds-WP_221068316.1;Parent=gene-VA249_RS13920;Dbxref=Genbank:WP_221068316.1;Name=WP_221068316.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010650524.1;locus_tag=VA249_RS13920;product=glutamate racemase;protein_id=WP_221068316.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3017445 3018128 . - . ID=gene-VA249_RS13925;Name=VA249_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13925;old_locus_tag=VYA_25910 NZ_AP024165.1 Protein Homology CDS 3017445 3018128 . - 0 ID=cds-WP_221068317.1;Parent=gene-VA249_RS13925;Dbxref=Genbank:WP_221068317.1;Name=WP_221068317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430902.1;locus_tag=VA249_RS13925;product=adenine nucleotide alpha hydrolase;protein_id=WP_221068317.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3018212 3020086 . - . ID=gene-VA249_RS13930;Name=VA249_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13930;old_locus_tag=VYA_25920 NZ_AP024165.1 Protein Homology CDS 3018212 3020086 . - 0 ID=cds-WP_221068320.1;Parent=gene-VA249_RS13930;Dbxref=Genbank:WP_221068320.1;Name=WP_221068320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438476.1;locus_tag=VA249_RS13930;product=TonB-dependent receptor;protein_id=WP_221068320.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 3020141 3020342 . - . ID=id-NZ_AP024165.1:3020141..3020342;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 3020526 3021635 . + . ID=gene-VA249_RS13935;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=VA249_RS13935;old_locus_tag=VYA_25930 NZ_AP024165.1 Protein Homology CDS 3020526 3021635 . + 0 ID=cds-WP_221068321.1;Parent=gene-VA249_RS13935;Dbxref=Genbank:WP_221068321.1;Name=WP_221068321.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444451.1;locus_tag=VA249_RS13935;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_221068321.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3021701 3022066 . - . ID=gene-VA249_RS13940;Name=VA249_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13940;old_locus_tag=VYA_25940 NZ_AP024165.1 Protein Homology CDS 3021701 3022066 . - 0 ID=cds-WP_128809884.1;Parent=gene-VA249_RS13940;Dbxref=Genbank:WP_128809884.1;Name=WP_128809884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430908.1;locus_tag=VA249_RS13940;product=YijD family membrane protein;protein_id=WP_128809884.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3022066 3022707 . - . ID=gene-VA249_RS13945;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=VA249_RS13945;old_locus_tag=VYA_25950 NZ_AP024165.1 Protein Homology CDS 3022066 3022707 . - 0 ID=cds-WP_005430912.1;Parent=gene-VA249_RS13945;Dbxref=Genbank:WP_005430912.1;Name=WP_005430912.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075925.1;locus_tag=VA249_RS13945;product=HTH-type transcriptional repressor FabR;protein_id=WP_005430912.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3022998 3024398 . + . ID=gene-VA249_RS13950;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=VA249_RS13950;old_locus_tag=VYA_25960 NZ_AP024165.1 Protein Homology CDS 3022998 3024398 . + 0 ID=cds-WP_038884855.1;Parent=gene-VA249_RS13950;Dbxref=Genbank:WP_038884855.1;Name=WP_038884855.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017104716.1;locus_tag=VA249_RS13950;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_038884855.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3024467 3025810 . - . ID=gene-VA249_RS13955;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=VA249_RS13955;old_locus_tag=VYA_25970 NZ_AP024165.1 Protein Homology CDS 3024467 3025810 . - 0 ID=cds-WP_221068322.1;Parent=gene-VA249_RS13955;Dbxref=Genbank:WP_221068322.1;Name=WP_221068322.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705149.1;locus_tag=VA249_RS13955;product=MATE family efflux transporter DinF;protein_id=WP_221068322.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3025866 3026660 . - . ID=gene-VA249_RS13960;Name=VA249_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13960;old_locus_tag=VYA_25980 NZ_AP024165.1 Protein Homology CDS 3025866 3026660 . - 0 ID=cds-WP_221068323.1;Parent=gene-VA249_RS13960;Dbxref=Genbank:WP_221068323.1;Name=WP_221068323.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444461.1;locus_tag=VA249_RS13960;product=class I SAM-dependent methyltransferase;protein_id=WP_221068323.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3026868 3027488 . - . ID=gene-VA249_RS13965;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=VA249_RS13965;old_locus_tag=VYA_25990 NZ_AP024165.1 Protein Homology CDS 3026868 3027488 . - 0 ID=cds-WP_128809880.1;Parent=gene-VA249_RS13965;Dbxref=Genbank:WP_128809880.1;Name=WP_128809880.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012534359.1;locus_tag=VA249_RS13965;product=transcriptional repressor LexA;protein_id=WP_128809880.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3027857 3030283 . + . ID=gene-VA249_RS13970;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=VA249_RS13970;old_locus_tag=VYA_26000 NZ_AP024165.1 Protein Homology CDS 3027857 3030283 . + 0 ID=cds-WP_221068324.1;Parent=gene-VA249_RS13970;Dbxref=Genbank:WP_221068324.1;Name=WP_221068324.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460370.1;locus_tag=VA249_RS13970;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_221068324.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3030419 3031855 . + . ID=gene-VA249_RS13975;Name=VA249_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13975;old_locus_tag=VYA_26010 NZ_AP024165.1 Protein Homology CDS 3030419 3031855 . + 0 ID=cds-WP_221067583.1-14;Parent=gene-VA249_RS13975;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS13975;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3031986 3032840 . - . ID=gene-VA249_RS13980;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=VA249_RS13980;old_locus_tag=VYA_26020 NZ_AP024165.1 Protein Homology CDS 3031986 3032840 . - 0 ID=cds-WP_211915760.1;Parent=gene-VA249_RS13980;Dbxref=Genbank:WP_211915760.1;Name=WP_211915760.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126569.1;locus_tag=VA249_RS13980;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_211915760.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3032841 3033380 . - . ID=gene-VA249_RS13985;Name=VA249_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13985;old_locus_tag=VYA_26030 NZ_AP024165.1 Protein Homology CDS 3032841 3033380 . - 0 ID=cds-WP_221068325.1;Parent=gene-VA249_RS13985;Dbxref=Genbank:WP_221068325.1;Name=WP_221068325.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430917.1;locus_tag=VA249_RS13985;product=chorismate lyase;protein_id=WP_221068325.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3033534 3033944 . + . ID=gene-VA249_RS13990;Name=VA249_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS13990;old_locus_tag=VYA_26040 NZ_AP024165.1 Protein Homology CDS 3033534 3033944 . + 0 ID=cds-WP_128809876.1;Parent=gene-VA249_RS13990;Dbxref=Genbank:WP_128809876.1;Name=WP_128809876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444471.1;locus_tag=VA249_RS13990;product=flagellar basal body-associated protein FliL;protein_id=WP_128809876.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3034018 3034860 . - . ID=gene-VA249_RS13995;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=VA249_RS13995;old_locus_tag=VYA_26050 NZ_AP024165.1 Protein Homology CDS 3034018 3034860 . - 0 ID=cds-WP_221068326.1;Parent=gene-VA249_RS13995;Dbxref=Genbank:WP_221068326.1;Name=WP_221068326.1;Ontology_term=GO:0019538,GO:0004252,GO:0005887;gbkey=CDS;gene=glpG;go_component=integral component of plasma membrane|0005887||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126570.1;locus_tag=VA249_RS13995;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_221068326.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3034860 3035180 . - . ID=gene-VA249_RS14000;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=VA249_RS14000;old_locus_tag=VYA_26060 NZ_AP024165.1 Protein Homology CDS 3034860 3035180 . - 0 ID=cds-WP_128809874.1;Parent=gene-VA249_RS14000;Dbxref=Genbank:WP_128809874.1;Name=WP_128809874.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460380.1;locus_tag=VA249_RS14000;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_128809874.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3035591 3036448 . - . ID=gene-VA249_RS14005;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=VA249_RS14005;old_locus_tag=VYA_26080 NZ_AP024165.1 Protein Homology CDS 3035591 3036448 . - 0 ID=cds-WP_128809873.1;Parent=gene-VA249_RS14005;Dbxref=Genbank:WP_128809873.1;Name=WP_128809873.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017055518.1;locus_tag=VA249_RS14005;product=RNA polymerase sigma factor RpoH;protein_id=WP_128809873.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3036624 3037592 . - . ID=gene-VA249_RS14010;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=VA249_RS14010;old_locus_tag=VYA_26090 NZ_AP024165.1 Protein Homology CDS 3036624 3037592 . - 0 ID=cds-WP_128809872.1;Parent=gene-VA249_RS14010;Dbxref=Genbank:WP_128809872.1;Name=WP_128809872.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740530.1;locus_tag=VA249_RS14010;product=permease-like cell division protein FtsX;protein_id=WP_128809872.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3037582 3038256 . - . ID=gene-VA249_RS14015;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=VA249_RS14015;old_locus_tag=VYA_26100 NZ_AP024165.1 Protein Homology CDS 3037582 3038256 . - 0 ID=cds-WP_005535654.1;Parent=gene-VA249_RS14015;Dbxref=Genbank:WP_005535654.1;Name=WP_005535654.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617862.1;locus_tag=VA249_RS14015;product=cell division ATP-binding protein FtsE;protein_id=WP_005535654.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3038279 3039499 . - . ID=gene-VA249_RS14020;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=VA249_RS14020;old_locus_tag=VYA_26110 NZ_AP024165.1 Protein Homology CDS 3038279 3039499 . - 0 ID=cds-WP_221068327.1;Parent=gene-VA249_RS14020;Dbxref=Genbank:WP_221068327.1;Name=WP_221068327.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817453.1;locus_tag=VA249_RS14020;product=signal recognition particle-docking protein FtsY;protein_id=WP_221068327.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3039724 3040323 . + . ID=gene-VA249_RS14025;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=VA249_RS14025;old_locus_tag=VYA_26120 NZ_AP024165.1 Protein Homology CDS 3039724 3040323 . + 0 ID=cds-WP_221068329.1;Parent=gene-VA249_RS14025;Dbxref=Genbank:WP_221068329.1;Name=WP_221068329.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452007.1;locus_tag=VA249_RS14025;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_221068329.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3040349 3040615 . + . ID=gene-VA249_RS14030;Name=VA249_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14030;old_locus_tag=VYA_26130 NZ_AP024165.1 Protein Homology CDS 3040349 3040615 . + 0 ID=cds-WP_099080949.1;Parent=gene-VA249_RS14030;Dbxref=Genbank:WP_099080949.1;Name=WP_099080949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005496405.1;locus_tag=VA249_RS14030;product=DUF1145 domain-containing protein;protein_id=WP_099080949.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3040764 3040985 . - . ID=gene-VA249_RS14035;Name=VA249_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14035;old_locus_tag=VYA_26140 NZ_AP024165.1 Protein Homology CDS 3040764 3040985 . - 0 ID=cds-WP_221069960.1;Parent=gene-VA249_RS14035;Dbxref=Genbank:WP_221069960.1;Name=WP_221069960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430335.1;locus_tag=VA249_RS14035;product=DUF2492 family protein;protein_id=WP_221069960.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3041055 3041675 . - . ID=gene-VA249_RS14040;Name=VA249_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14040;old_locus_tag=VYA_26150 NZ_AP024165.1 Protein Homology CDS 3041055 3041675 . - 0 ID=cds-WP_221068330.1;Parent=gene-VA249_RS14040;Dbxref=Genbank:WP_221068330.1;Name=WP_221068330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844036.1;locus_tag=VA249_RS14040;product=lysoplasmalogenase family protein;protein_id=WP_221068330.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3042701 3043066 . - . ID=gene-VA249_RS14045;Name=VA249_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14045;old_locus_tag=VYA_26170 NZ_AP024165.1 Protein Homology CDS 3042701 3043066 . - 0 ID=cds-WP_128809867.1;Parent=gene-VA249_RS14045;Dbxref=Genbank:WP_128809867.1;Name=WP_128809867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430355.1;locus_tag=VA249_RS14045;product=DUF4145 domain-containing protein;protein_id=WP_128809867.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3043308 3043637 . + . ID=gene-VA249_RS14050;Name=VA249_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14050;old_locus_tag=VYA_26180 NZ_AP024165.1 Protein Homology CDS 3043308 3043637 . + 0 ID=cds-WP_128809866.1;Parent=gene-VA249_RS14050;Dbxref=Genbank:WP_128809866.1;Name=WP_128809866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740515.1;locus_tag=VA249_RS14050;product=DUF2500 domain-containing protein;protein_id=WP_128809866.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3043639 3044652 . - . ID=gene-VA249_RS14055;Name=VA249_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14055;old_locus_tag=VYA_26190 NZ_AP024165.1 Protein Homology CDS 3043639 3044652 . - 0 ID=cds-WP_221068331.1;Parent=gene-VA249_RS14055;Dbxref=Genbank:WP_221068331.1;Name=WP_221068331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233320.1;locus_tag=VA249_RS14055;product=acyltransferase;protein_id=WP_221068331.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3044902 3045282 . + . ID=gene-VA249_RS14060;Name=VA249_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14060;old_locus_tag=VYA_26200 NZ_AP024165.1 Protein Homology CDS 3044902 3045282 . + 0 ID=cds-WP_221068332.1;Parent=gene-VA249_RS14060;Dbxref=Genbank:WP_221068332.1;Name=WP_221068332.1;Ontology_term=GO:0004869;gbkey=CDS;go_function=cysteine-type endopeptidase inhibitor activity|0004869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705158.1;locus_tag=VA249_RS14060;product=cystatin domain-containing protein;protein_id=WP_221068332.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3045372 3046589 . - . ID=gene-VA249_RS14065;Name=arsJ;gbkey=Gene;gene=arsJ;gene_biotype=protein_coding;locus_tag=VA249_RS14065;old_locus_tag=VYA_26210 NZ_AP024165.1 Protein Homology CDS 3045372 3046589 . - 0 ID=cds-WP_221068333.1;Parent=gene-VA249_RS14065;Dbxref=Genbank:WP_221068333.1;Name=WP_221068333.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=arsJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005383628.1;locus_tag=VA249_RS14065;product=organoarsenical effux MFS transporter ArsJ;protein_id=WP_221068333.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3046848 3047342 . - . ID=gene-VA249_RS14070;Name=VA249_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14070;old_locus_tag=VYA_26220 NZ_AP024165.1 Protein Homology CDS 3046848 3047342 . - 0 ID=cds-WP_221068334.1;Parent=gene-VA249_RS14070;Dbxref=Genbank:WP_221068334.1;Name=WP_221068334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452015.1;locus_tag=VA249_RS14070;product=cyclin-dependent kinase inhibitor 3 family protein;protein_id=WP_221068334.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3047354 3048355 . - . ID=gene-VA249_RS14075;Name=VA249_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14075;old_locus_tag=VYA_26230 NZ_AP024165.1 Protein Homology CDS 3047354 3048355 . - 0 ID=cds-WP_221068335.1;Parent=gene-VA249_RS14075;Dbxref=Genbank:WP_221068335.1;Name=WP_221068335.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017061027.1;locus_tag=VA249_RS14075;product=ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_221068335.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3048399 3048734 . - . ID=gene-VA249_RS14080;Name=VA249_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14080;old_locus_tag=VYA_26240 NZ_AP024165.1 Protein Homology CDS 3048399 3048734 . - 0 ID=cds-WP_221068336.1;Parent=gene-VA249_RS14080;Dbxref=Genbank:WP_221068336.1;Name=WP_221068336.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017187923.1;locus_tag=VA249_RS14080;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_221068336.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3049009 3049623 . - . ID=gene-VA249_RS14085;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=VA249_RS14085;old_locus_tag=VYA_26250 NZ_AP024165.1 Protein Homology CDS 3049009 3049623 . - 0 ID=cds-WP_211915748.1;Parent=gene-VA249_RS14085;Dbxref=Genbank:WP_211915748.1;Name=WP_211915748.1;Ontology_term=GO:0006865,GO:0016021;gbkey=CDS;gene=rhtB;go_component=integral component of membrane|0016021||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430372.1;locus_tag=VA249_RS14085;product=homoserine/homoserine lactone efflux protein;protein_id=WP_211915748.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3049689 3050687 . + . ID=gene-VA249_RS14090;Name=VA249_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14090;old_locus_tag=VYA_26260 NZ_AP024165.1 Protein Homology CDS 3049689 3050687 . + 0 ID=cds-WP_221068337.1;Parent=gene-VA249_RS14090;Dbxref=Genbank:WP_221068337.1;Name=WP_221068337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005459120.1;locus_tag=VA249_RS14090;product=alpha/beta fold hydrolase;protein_id=WP_221068337.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3050849 3051673 . + . ID=gene-VA249_RS14095;Name=VA249_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14095;old_locus_tag=VYA_26270 NZ_AP024165.1 Protein Homology CDS 3050849 3051673 . + 0 ID=cds-WP_221068338.1;Parent=gene-VA249_RS14095;Dbxref=Genbank:WP_221068338.1;Name=WP_221068338.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197739.1;locus_tag=VA249_RS14095;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_221068338.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3051747 3052214 . - . ID=gene-VA249_RS14100;Name=VA249_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14100;old_locus_tag=VYA_26280 NZ_AP024165.1 Protein Homology CDS 3051747 3052214 . - 0 ID=cds-WP_221068339.1;Parent=gene-VA249_RS14100;Dbxref=Genbank:WP_221068339.1;Name=WP_221068339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008081807.1;locus_tag=VA249_RS14100;product=EVE domain-containing protein;protein_id=WP_221068339.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3052254 3053804 . + . ID=gene-VA249_RS14105;Name=VA249_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14105;old_locus_tag=VYA_26290 NZ_AP024165.1 Protein Homology CDS 3052254 3053804 . + 0 ID=cds-WP_221068340.1;Parent=gene-VA249_RS14105;Dbxref=Genbank:WP_221068340.1;Name=WP_221068340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430342.1;locus_tag=VA249_RS14105;product=hypothetical protein;protein_id=WP_221068340.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3053804 3054403 . + . ID=gene-VA249_RS14110;Name=VA249_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14110;old_locus_tag=VYA_26300 NZ_AP024165.1 Protein Homology CDS 3053804 3054403 . + 0 ID=cds-WP_221069963.1;Parent=gene-VA249_RS14110;Dbxref=Genbank:WP_221069963.1;Name=WP_221069963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017187921.1;locus_tag=VA249_RS14110;product=DTW domain-containing protein;protein_id=WP_221069963.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3054466 3055188 . - . ID=gene-VA249_RS14115;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=VA249_RS14115;old_locus_tag=VYA_26310 NZ_AP024165.1 Protein Homology CDS 3054466 3055188 . - 0 ID=cds-WP_221068341.1;Parent=gene-VA249_RS14115;Dbxref=Genbank:WP_221068341.1;Name=WP_221068341.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197938.1;locus_tag=VA249_RS14115;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_221068341.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3055197 3056129 . - . ID=gene-VA249_RS14120;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=VA249_RS14120;old_locus_tag=VYA_26320 NZ_AP024165.1 Protein Homology CDS 3055197 3056129 . - 0 ID=cds-WP_211915742.1;Parent=gene-VA249_RS14120;Dbxref=Genbank:WP_211915742.1;Name=WP_211915742.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841287.1;locus_tag=VA249_RS14120;product=tyrosine recombinase XerC;protein_id=WP_211915742.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3056095 3056826 . - . ID=gene-VA249_RS14125;Name=VA249_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14125;old_locus_tag=VYA_26330 NZ_AP024165.1 Protein Homology CDS 3056095 3056826 . - 0 ID=cds-WP_221068342.1;Parent=gene-VA249_RS14125;Dbxref=Genbank:WP_221068342.1;Name=WP_221068342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449425.1;locus_tag=VA249_RS14125;product=DUF484 family protein;protein_id=WP_221068342.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3056820 3057650 . - . ID=gene-VA249_RS14130;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=VA249_RS14130;old_locus_tag=VYA_26340 NZ_AP024165.1 Protein Homology CDS 3056820 3057650 . - 0 ID=cds-WP_128809852.1;Parent=gene-VA249_RS14130;Dbxref=Genbank:WP_128809852.1;Name=WP_128809852.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848210.1;locus_tag=VA249_RS14130;product=diaminopimelate epimerase;protein_id=WP_128809852.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3057661 3058914 . - . ID=gene-VA249_RS14135;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=VA249_RS14135;old_locus_tag=VYA_26350 NZ_AP024165.1 Protein Homology CDS 3057661 3058914 . - 0 ID=cds-WP_221068343.1;Parent=gene-VA249_RS14135;Dbxref=Genbank:WP_221068343.1;Name=WP_221068343.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334062.1;locus_tag=VA249_RS14135;product=diaminopimelate decarboxylase;protein_id=WP_221068343.1;transl_table=11 NZ_AP024165.1 RefSeq pseudogene 3058976 3059187 . - . ID=gene-VA249_RS14140;Name=VA249_RS14140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS14140;pseudo=true NZ_AP024165.1 Protein Homology CDS 3058976 3059187 . - 0 ID=cds-VA249_RS14140;Parent=gene-VA249_RS14140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016768428.1;locus_tag=VA249_RS14140;product=lipoprotein;pseudo=true;transl_table=11 NZ_AP024165.1 RefSeq gene 3059167 3059481 . + . ID=gene-VA249_RS14145;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=VA249_RS14145;old_locus_tag=VYA_26360 NZ_AP024165.1 Protein Homology CDS 3059167 3059481 . + 0 ID=cds-WP_211915738.1;Parent=gene-VA249_RS14145;Dbxref=Genbank:WP_211915738.1;Name=WP_211915738.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004408827.1;locus_tag=VA249_RS14145;product=iron donor protein CyaY;protein_id=WP_211915738.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3059556 3062084 . - . ID=gene-VA249_RS14150;Name=VA249_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14150;old_locus_tag=VYA_26370 NZ_AP024165.1 Protein Homology CDS 3059556 3062084 . - 0 ID=cds-WP_221068344.1;Parent=gene-VA249_RS14150;Dbxref=Genbank:WP_221068344.1;Name=WP_221068344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740461.1;locus_tag=VA249_RS14150;product=class I adenylate cyclase;protein_id=WP_221068344.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3062431 3063369 . + . ID=gene-VA249_RS14155;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=VA249_RS14155;old_locus_tag=VYA_26380 NZ_AP024165.1 Protein Homology CDS 3062431 3063369 . + 0 ID=cds-WP_221068345.1;Parent=gene-VA249_RS14155;Dbxref=Genbank:WP_221068345.1;Name=WP_221068345.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635977.1;locus_tag=VA249_RS14155;product=hydroxymethylbilane synthase;protein_id=WP_221068345.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3063372 3064100 . + . ID=gene-VA249_RS14160;Name=VA249_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14160;old_locus_tag=VYA_26390 NZ_AP024165.1 Protein Homology CDS 3063372 3064100 . + 0 ID=cds-WP_221068346.1;Parent=gene-VA249_RS14160;Dbxref=Genbank:WP_221068346.1;Name=WP_221068346.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817444.1;locus_tag=VA249_RS14160;product=uroporphyrinogen-III synthase;protein_id=WP_221068346.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3064118 3065329 . + . ID=gene-VA249_RS14165;Name=VA249_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14165;old_locus_tag=VYA_26400 NZ_AP024165.1 Protein Homology CDS 3064118 3065329 . + 0 ID=cds-WP_221068347.1;Parent=gene-VA249_RS14165;Dbxref=Genbank:WP_221068347.1;Name=WP_221068347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197933.1;locus_tag=VA249_RS14165;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_221068347.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3065329 3066510 . + . ID=gene-VA249_RS14170;Name=VA249_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14170;old_locus_tag=VYA_26410 NZ_AP024165.1 Protein Homology CDS 3065329 3066510 . + 0 ID=cds-WP_128809846.1;Parent=gene-VA249_RS14170;Dbxref=Genbank:WP_128809846.1;Name=WP_128809846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197932.1;locus_tag=VA249_RS14170;product=heme biosynthesis protein HemY;protein_id=WP_128809846.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3067151 3067241 . - . ID=gene-VA249_RS14175;Name=VA249_RS14175;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS14175;old_locus_tag=VYA_t01130 NZ_AP024165.1 tRNAscan-SE tRNA 3067151 3067241 . - . ID=rna-VA249_RS14175;Parent=gene-VA249_RS14175;anticodon=(pos:complement(3067205..3067207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14175;product=tRNA-Ser NZ_AP024165.1 tRNAscan-SE exon 3067151 3067241 . - . ID=exon-VA249_RS14175-1;Parent=rna-VA249_RS14175;anticodon=(pos:complement(3067205..3067207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14175;product=tRNA-Ser NZ_AP024165.1 RefSeq gene 3067332 3067448 . - . ID=gene-VA249_RS14180;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS14180;old_locus_tag=VYA_r00320 NZ_AP024165.1 cmsearch rRNA 3067332 3067448 . - . ID=rna-VA249_RS14180;Parent=gene-VA249_RS14180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14180;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 3067332 3067448 . - . ID=exon-VA249_RS14180-1;Parent=rna-VA249_RS14180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14180;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 3067541 3070433 . - . ID=gene-VA249_RS14185;Name=VA249_RS14185;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS14185;old_locus_tag=VYA_r00330 NZ_AP024165.1 cmsearch rRNA 3067541 3070433 . - . ID=rna-VA249_RS14185;Parent=gene-VA249_RS14185;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14185;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 3067541 3070433 . - . ID=exon-VA249_RS14185-1;Parent=rna-VA249_RS14185;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14185;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 3070740 3070815 . - . ID=gene-VA249_RS14190;Name=VA249_RS14190;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS14190;old_locus_tag=VYA_t01140 NZ_AP024165.1 tRNAscan-SE tRNA 3070740 3070815 . - . ID=rna-VA249_RS14190;Parent=gene-VA249_RS14190;anticodon=(pos:complement(3070780..3070782));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14190;product=tRNA-Ala NZ_AP024165.1 tRNAscan-SE exon 3070740 3070815 . - . ID=exon-VA249_RS14190-1;Parent=rna-VA249_RS14190;anticodon=(pos:complement(3070780..3070782));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14190;product=tRNA-Ala NZ_AP024165.1 RefSeq gene 3070856 3070932 . - . ID=gene-VA249_RS14195;Name=VA249_RS14195;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS14195;old_locus_tag=VYA_t01150 NZ_AP024165.1 tRNAscan-SE tRNA 3070856 3070932 . - . ID=rna-VA249_RS14195;Parent=gene-VA249_RS14195;anticodon=(pos:complement(3070896..3070898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14195;product=tRNA-Ile NZ_AP024165.1 tRNAscan-SE exon 3070856 3070932 . - . ID=exon-VA249_RS14195-1;Parent=rna-VA249_RS14195;anticodon=(pos:complement(3070896..3070898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14195;product=tRNA-Ile NZ_AP024165.1 RefSeq gene 3071000 3072554 . - . ID=gene-VA249_RS14200;Name=VA249_RS14200;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS14200;old_locus_tag=VYA_r00340 NZ_AP024165.1 cmsearch rRNA 3071000 3072554 . - . ID=rna-VA249_RS14200;Parent=gene-VA249_RS14200;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14200;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 3071000 3072554 . - . ID=exon-VA249_RS14200-1;Parent=rna-VA249_RS14200;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14200;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 3073093 3073806 . - . ID=gene-VA249_RS14205;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=VA249_RS14205;old_locus_tag=VYA_26430 NZ_AP024165.1 Protein Homology CDS 3073093 3073806 . - 0 ID=cds-WP_221068348.1;Parent=gene-VA249_RS14205;Dbxref=Genbank:WP_221068348.1;Name=WP_221068348.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444558.1;locus_tag=VA249_RS14205;product=NAD(P)H-flavin reductase;protein_id=WP_221068348.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3073821 3074090 . - . ID=gene-VA249_RS14210;Name=VA249_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14210;old_locus_tag=VYA_26440 NZ_AP024165.1 Protein Homology CDS 3073821 3074090 . - 0 ID=cds-WP_221068349.1;Parent=gene-VA249_RS14210;Dbxref=Genbank:WP_221068349.1;Name=WP_221068349.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020333379.1;locus_tag=VA249_RS14210;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_221068349.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3074087 3075940 . - . ID=gene-VA249_RS14215;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=VA249_RS14215;old_locus_tag=VYA_26450 NZ_AP024165.1 Protein Homology CDS 3074087 3075940 . - 0 ID=cds-WP_221068350.1;Parent=gene-VA249_RS14215;Dbxref=Genbank:WP_221068350.1;Name=WP_221068350.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643201.1;locus_tag=VA249_RS14215;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_221068350.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3076032 3077024 . - . ID=gene-VA249_RS14220;Name=VA249_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14220;old_locus_tag=VYA_26460 NZ_AP024165.1 Protein Homology CDS 3076032 3077024 . - 0 ID=cds-WP_221068351.1;Parent=gene-VA249_RS14220;Dbxref=Genbank:WP_221068351.1;Name=WP_221068351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451187.1;locus_tag=VA249_RS14220;product=hypothetical protein;protein_id=WP_221068351.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3077133 3078392 . - . ID=gene-VA249_RS14225;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=VA249_RS14225;old_locus_tag=VYA_26470 NZ_AP024165.1 Protein Homology CDS 3077133 3078392 . - 0 ID=cds-WP_038868581.1;Parent=gene-VA249_RS14225;Dbxref=Genbank:WP_038868581.1;Name=WP_038868581.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017631298.1;locus_tag=VA249_RS14225;product=transcription termination factor Rho;protein_id=WP_038868581.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3078589 3078915 . - . ID=gene-VA249_RS14230;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=VA249_RS14230;old_locus_tag=VYA_26480 NZ_AP024165.1 Protein Homology CDS 3078589 3078915 . - 0 ID=cds-WP_004745500.1;Parent=gene-VA249_RS14230;Dbxref=Genbank:WP_004745500.1;Name=WP_004745500.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008073352.1;locus_tag=VA249_RS14230;product=thioredoxin TrxA;protein_id=WP_004745500.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3079027 3080340 . + . ID=gene-VA249_RS14235;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=VA249_RS14235;old_locus_tag=VYA_26490 NZ_AP024165.1 Protein Homology CDS 3079027 3080340 . + 0 ID=cds-WP_128809842.1;Parent=gene-VA249_RS14235;Dbxref=Genbank:WP_128809842.1;Name=WP_128809842.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440041.1;locus_tag=VA249_RS14235;product=ATP-dependent RNA helicase RhlB;protein_id=WP_128809842.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3080360 3081853 . + . ID=gene-VA249_RS14240;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=VA249_RS14240;old_locus_tag=VYA_26500 NZ_AP024165.1 Protein Homology CDS 3080360 3081853 . + 0 ID=cds-WP_221068352.1;Parent=gene-VA249_RS14240;Dbxref=Genbank:WP_221068352.1;Name=WP_221068352.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126604.1;locus_tag=VA249_RS14240;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_221068352.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3082074 3082748 . - . ID=gene-VA249_RS14245;Name=VA249_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14245;old_locus_tag=VYA_26510 NZ_AP024165.1 Protein Homology CDS 3082074 3082748 . - 0 ID=cds-WP_128809840.1;Parent=gene-VA249_RS14245;Dbxref=Genbank:WP_128809840.1;Name=WP_128809840.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444572.1;locus_tag=VA249_RS14245;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_128809840.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3083000 3083305 . - . ID=gene-VA249_RS14250;Name=VA249_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14250;old_locus_tag=VYA_26520 NZ_AP024165.1 Protein Homology CDS 3083000 3083305 . - 0 ID=cds-WP_221068353.1;Parent=gene-VA249_RS14250;Dbxref=Genbank:WP_221068353.1;Name=WP_221068353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536002.1;locus_tag=VA249_RS14250;product=DUF3630 family protein;protein_id=WP_221068353.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3083315 3085150 . - . ID=gene-VA249_RS14255;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=VA249_RS14255;old_locus_tag=VYA_26530 NZ_AP024165.1 Protein Homology CDS 3083315 3085150 . - 0 ID=cds-WP_221068354.1;Parent=gene-VA249_RS14255;Dbxref=Genbank:WP_221068354.1;Name=WP_221068354.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014204118.1;locus_tag=VA249_RS14255;product=ATP-dependent DNA helicase RecQ;protein_id=WP_221068354.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3085328 3086242 . + . ID=gene-VA249_RS14260;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=VA249_RS14260;old_locus_tag=VYA_26540 NZ_AP024165.1 Protein Homology CDS 3085328 3086242 . + 0 ID=cds-WP_221068355.1;Parent=gene-VA249_RS14260;Dbxref=Genbank:WP_221068355.1;Name=WP_221068355.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440031.1;locus_tag=VA249_RS14260;product=EamA family transporter RarD;protein_id=WP_221068355.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3086314 3087111 . + . ID=gene-VA249_RS14265;Name=VA249_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14265;old_locus_tag=VYA_26550 NZ_AP024165.1 Protein Homology CDS 3086314 3087111 . + 0 ID=cds-WP_221069965.1;Parent=gene-VA249_RS14265;Dbxref=Genbank:WP_221069965.1;Name=WP_221069965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696782.1;locus_tag=VA249_RS14265;product=AraC family transcriptional regulator;protein_id=WP_221069965.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3087203 3087871 . + . ID=gene-VA249_RS14270;Name=VA249_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14270;old_locus_tag=VYA_26560 NZ_AP024165.1 Protein Homology CDS 3087203 3087871 . + 0 ID=cds-WP_221068356.1;Parent=gene-VA249_RS14270;Dbxref=Genbank:WP_221068356.1;Name=WP_221068356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196959.1;locus_tag=VA249_RS14270;product=LysE family translocator;protein_id=WP_221068356.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3087981 3089747 . + . ID=gene-VA249_RS14275;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=VA249_RS14275;old_locus_tag=VYA_26570 NZ_AP024165.1 Protein Homology CDS 3087981 3089747 . + 0 ID=cds-WP_221068357.1;Parent=gene-VA249_RS14275;Dbxref=Genbank:WP_221068357.1;Name=WP_221068357.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005382919.1;locus_tag=VA249_RS14275;product=gamma-glutamyltransferase;protein_id=WP_221068357.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3090526 3092700 . - . ID=gene-VA249_RS14280;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=VA249_RS14280;old_locus_tag=VYA_26580 NZ_AP024165.1 Protein Homology CDS 3090526 3092700 . - 0 ID=cds-WP_221068358.1;Parent=gene-VA249_RS14280;Dbxref=Genbank:WP_221068358.1;Name=WP_221068358.1;Ontology_term=GO:0006281,GO:0003678;gbkey=CDS;gene=uvrD;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008221520.1;locus_tag=VA249_RS14280;product=DNA helicase II;protein_id=WP_221068358.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3092984 3093244 . + . ID=gene-VA249_RS14285;Name=VA249_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14285;old_locus_tag=VYA_26590 NZ_AP024165.1 Protein Homology CDS 3092984 3093244 . + 0 ID=cds-WP_211915719.1;Parent=gene-VA249_RS14285;Dbxref=Genbank:WP_211915719.1;Name=WP_211915719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536405.1;locus_tag=VA249_RS14285;product=DUF2282 domain-containing protein;protein_id=WP_211915719.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3093330 3094202 . + . ID=gene-VA249_RS14290;Name=VA249_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14290;old_locus_tag=VYA_26600 NZ_AP024165.1 Protein Homology CDS 3093330 3094202 . + 0 ID=cds-WP_221068359.1;Parent=gene-VA249_RS14290;Dbxref=Genbank:WP_221068359.1;Name=WP_221068359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005430302.1;locus_tag=VA249_RS14290;product=DUF692 domain-containing protein;protein_id=WP_221068359.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3094199 3094957 . + . ID=gene-VA249_RS14295;Name=VA249_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14295;old_locus_tag=VYA_26610 NZ_AP024165.1 Protein Homology CDS 3094199 3094957 . + 0 ID=cds-WP_221068360.1;Parent=gene-VA249_RS14295;Dbxref=Genbank:WP_221068360.1;Name=WP_221068360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196955.1;locus_tag=VA249_RS14295;product=putative DNA-binding domain-containing protein;protein_id=WP_221068360.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3094968 3095423 . + . ID=gene-VA249_RS14300;Name=VA249_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14300;old_locus_tag=VYA_26620 NZ_AP024165.1 Protein Homology CDS 3094968 3095423 . + 0 ID=cds-WP_221068361.1;Parent=gene-VA249_RS14300;Dbxref=Genbank:WP_221068361.1;Name=WP_221068361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451251.1;locus_tag=VA249_RS14300;product=DoxX family protein;protein_id=WP_221068361.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3095455 3095736 . - . ID=gene-VA249_RS14305;Name=VA249_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14305;old_locus_tag=VYA_26630 NZ_AP024165.1 Protein Homology CDS 3095455 3095736 . - 0 ID=cds-WP_069218570.1;Parent=gene-VA249_RS14305;Dbxref=Genbank:WP_069218570.1;Name=WP_069218570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736654.1;locus_tag=VA249_RS14305;product=hypothetical protein;protein_id=WP_069218570.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3095828 3097021 . - . ID=gene-VA249_RS14310;Name=VA249_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14310;old_locus_tag=VYA_26640 NZ_AP024165.1 Protein Homology CDS 3095828 3097021 . - 0 ID=cds-WP_221068362.1;Parent=gene-VA249_RS14310;Dbxref=Genbank:WP_221068362.1;Name=WP_221068362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443413.1;locus_tag=VA249_RS14310;product=multidrug effflux MFS transporter;protein_id=WP_221068362.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3097128 3098069 . + . ID=gene-VA249_RS14315;Name=VA249_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14315;old_locus_tag=VYA_26650 NZ_AP024165.1 Protein Homology CDS 3097128 3098069 . + 0 ID=cds-WP_128809828.1;Parent=gene-VA249_RS14315;Dbxref=Genbank:WP_128809828.1;Name=WP_128809828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006743068.1;locus_tag=VA249_RS14315;product=LysR substrate-binding domain-containing protein;protein_id=WP_128809828.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3098273 3100063 . + . ID=gene-VA249_RS14320;Name=VA249_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14320;old_locus_tag=VYA_26660 NZ_AP024165.1 Protein Homology CDS 3098273 3100063 . + 0 ID=cds-WP_221068363.1;Parent=gene-VA249_RS14320;Dbxref=Genbank:WP_221068363.1;Name=WP_221068363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696774.1;locus_tag=VA249_RS14320;product=M24B family metallopeptidase;protein_id=WP_221068363.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3100190 3101317 . - . ID=gene-VA249_RS14325;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=VA249_RS14325;old_locus_tag=VYA_26670 NZ_AP024165.1 Protein Homology CDS 3100190 3101317 . - 0 ID=cds-WP_221068364.1;Parent=gene-VA249_RS14325;Dbxref=Genbank:WP_221068364.1;Name=WP_221068364.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017110613.1;locus_tag=VA249_RS14325;product=2-iminoacetate synthase ThiH;protein_id=WP_221068364.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3101352 3102119 . - . ID=gene-VA249_RS14330;Name=VA249_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14330;old_locus_tag=VYA_26680 NZ_AP024165.1 Protein Homology CDS 3101352 3102119 . - 0 ID=cds-WP_009703039.1;Parent=gene-VA249_RS14330;Dbxref=Genbank:WP_009703039.1;Name=WP_009703039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297501.1;locus_tag=VA249_RS14330;product=thiazole synthase;protein_id=WP_009703039.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3102125 3102382 . - . ID=gene-VA249_RS14335;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=VA249_RS14335;old_locus_tag=VYA_26690 NZ_AP024165.1 Protein Homology CDS 3102125 3102382 . - 0 ID=cds-WP_221068365.1;Parent=gene-VA249_RS14335;Dbxref=Genbank:WP_221068365.1;Name=WP_221068365.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821778.1;locus_tag=VA249_RS14335;product=sulfur carrier protein ThiS;protein_id=WP_221068365.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3102437 3103204 . - . ID=gene-VA249_RS14340;Name=VA249_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14340;old_locus_tag=VYA_26700 NZ_AP024165.1 Protein Homology CDS 3102437 3103204 . - 0 ID=cds-WP_221068366.1;Parent=gene-VA249_RS14340;Dbxref=Genbank:WP_221068366.1;Name=WP_221068366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004409762.1;locus_tag=VA249_RS14340;product=HesA/MoeB/ThiF family protein;protein_id=WP_221068366.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3103191 3104606 . - . ID=gene-VA249_RS14345;Name=VA249_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14345;old_locus_tag=VYA_26710 NZ_AP024165.1 Protein Homology CDS 3103191 3104606 . - 0 ID=cds-WP_221068367.1;Parent=gene-VA249_RS14345;Dbxref=Genbank:WP_221068367.1;Name=WP_221068367.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633517.1;locus_tag=VA249_RS14345;product=thiamine phosphate synthase;protein_id=WP_221068367.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3104606 3106546 . - . ID=gene-VA249_RS14350;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=VA249_RS14350;old_locus_tag=VYA_26720 NZ_AP024165.1 Protein Homology CDS 3104606 3106546 . - 0 ID=cds-WP_221068368.1;Parent=gene-VA249_RS14350;Dbxref=Genbank:WP_221068368.1;Name=WP_221068368.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196949.1;locus_tag=VA249_RS14350;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_221068368.1;transl_table=11 NZ_AP024165.1 cmsearch riboswitch 3106712 3106810 . - . ID=id-NZ_AP024165.1:3106712..3106810;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024165.1 RefSeq gene 3106863 3107246 . - . ID=gene-VA249_RS14355;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=VA249_RS14355;old_locus_tag=VYA_26730 NZ_AP024165.1 Protein Homology CDS 3106863 3107246 . - 0 ID=cds-WP_221068369.1;Parent=gene-VA249_RS14355;Dbxref=Genbank:WP_221068369.1;Name=WP_221068369.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004745345.1;locus_tag=VA249_RS14355;product=fluoride efflux transporter CrcB;protein_id=WP_221068369.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3107679 3107755 . - . ID=gene-VA249_RS14360;Name=VA249_RS14360;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS14360;old_locus_tag=VYA_t01160 NZ_AP024165.1 tRNAscan-SE tRNA 3107679 3107755 . - . ID=rna-VA249_RS14360;Parent=gene-VA249_RS14360;anticodon=(pos:complement(3107719..3107721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14360;product=tRNA-Asp NZ_AP024165.1 tRNAscan-SE exon 3107679 3107755 . - . ID=exon-VA249_RS14360-1;Parent=rna-VA249_RS14360;anticodon=(pos:complement(3107719..3107721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14360;product=tRNA-Asp NZ_AP024165.1 RefSeq gene 3107821 3107937 . - . ID=gene-VA249_RS14365;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS14365;old_locus_tag=VYA_r00350 NZ_AP024165.1 cmsearch rRNA 3107821 3107937 . - . ID=rna-VA249_RS14365;Parent=gene-VA249_RS14365;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14365;product=5S ribosomal RNA NZ_AP024165.1 cmsearch exon 3107821 3107937 . - . ID=exon-VA249_RS14365-1;Parent=rna-VA249_RS14365;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14365;product=5S ribosomal RNA NZ_AP024165.1 RefSeq gene 3108069 3110961 . - . ID=gene-VA249_RS14370;Name=VA249_RS14370;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS14370;old_locus_tag=VYA_r00360 NZ_AP024165.1 cmsearch rRNA 3108069 3110961 . - . ID=rna-VA249_RS14370;Parent=gene-VA249_RS14370;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14370;product=23S ribosomal RNA NZ_AP024165.1 cmsearch exon 3108069 3110961 . - . ID=exon-VA249_RS14370-1;Parent=rna-VA249_RS14370;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14370;product=23S ribosomal RNA NZ_AP024165.1 RefSeq gene 3111331 3111406 . - . ID=gene-VA249_RS14375;Name=VA249_RS14375;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS14375;old_locus_tag=VYA_t01170 NZ_AP024165.1 tRNAscan-SE tRNA 3111331 3111406 . - . ID=rna-VA249_RS14375;Parent=gene-VA249_RS14375;anticodon=(pos:complement(3111371..3111373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14375;product=tRNA-Val NZ_AP024165.1 tRNAscan-SE exon 3111331 3111406 . - . ID=exon-VA249_RS14375-1;Parent=rna-VA249_RS14375;anticodon=(pos:complement(3111371..3111373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14375;product=tRNA-Val NZ_AP024165.1 RefSeq gene 3111474 3111549 . - . ID=gene-VA249_RS14380;Name=VA249_RS14380;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS14380;old_locus_tag=VYA_t01180 NZ_AP024165.1 tRNAscan-SE tRNA 3111474 3111549 . - . ID=rna-VA249_RS14380;Parent=gene-VA249_RS14380;anticodon=(pos:complement(3111514..3111516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14380;product=tRNA-Lys NZ_AP024165.1 tRNAscan-SE exon 3111474 3111549 . - . ID=exon-VA249_RS14380-1;Parent=rna-VA249_RS14380;anticodon=(pos:complement(3111514..3111516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14380;product=tRNA-Lys NZ_AP024165.1 RefSeq gene 3111552 3111627 . - . ID=gene-VA249_RS14385;Name=VA249_RS14385;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS14385;old_locus_tag=VYA_t01190 NZ_AP024165.1 tRNAscan-SE tRNA 3111552 3111627 . - . ID=rna-VA249_RS14385;Parent=gene-VA249_RS14385;anticodon=(pos:complement(3111591..3111593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14385;product=tRNA-Glu NZ_AP024165.1 tRNAscan-SE exon 3111552 3111627 . - . ID=exon-VA249_RS14385-1;Parent=rna-VA249_RS14385;anticodon=(pos:complement(3111591..3111593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS14385;product=tRNA-Glu NZ_AP024165.1 RefSeq gene 3111718 3113272 . - . ID=gene-VA249_RS14390;Name=VA249_RS14390;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS14390;old_locus_tag=VYA_r00370 NZ_AP024165.1 cmsearch rRNA 3111718 3113272 . - . ID=rna-VA249_RS14390;Parent=gene-VA249_RS14390;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14390;product=16S ribosomal RNA NZ_AP024165.1 cmsearch exon 3111718 3113272 . - . ID=exon-VA249_RS14390-1;Parent=rna-VA249_RS14390;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS14390;product=16S ribosomal RNA NZ_AP024165.1 RefSeq gene 3113816 3114370 . + . ID=gene-VA249_RS14395;Name=VA249_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14395;old_locus_tag=VYA_26740 NZ_AP024165.1 Protein Homology CDS 3113816 3114370 . + 0 ID=cds-WP_221068370.1;Parent=gene-VA249_RS14395;Dbxref=Genbank:WP_221068370.1;Name=WP_221068370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450962.1;locus_tag=VA249_RS14395;product=gamma carbonic anhydrase family protein;protein_id=WP_221068370.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3114394 3114657 . - . ID=gene-VA249_RS14400;Name=VA249_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14400;old_locus_tag=VYA_26750 NZ_AP024165.1 Protein Homology CDS 3114394 3114657 . - 0 ID=cds-WP_009708001.1;Parent=gene-VA249_RS14400;Dbxref=Genbank:WP_009708001.1;Name=WP_009708001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843936.1;locus_tag=VA249_RS14400;product=DUF1488 domain-containing protein;protein_id=WP_009708001.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3114661 3115494 . - . ID=gene-VA249_RS14405;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=VA249_RS14405;old_locus_tag=VYA_26760 NZ_AP024165.1 Protein Homology CDS 3114661 3115494 . - 0 ID=cds-WP_221068371.1;Parent=gene-VA249_RS14405;Dbxref=Genbank:WP_221068371.1;Name=WP_221068371.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005379088.1;locus_tag=VA249_RS14405;product=shikimate dehydrogenase;protein_id=WP_221068371.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3115594 3116511 . - . ID=gene-VA249_RS14410;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=VA249_RS14410;old_locus_tag=VYA_26770 NZ_AP024165.1 Protein Homology CDS 3115594 3116511 . - 0 ID=cds-WP_221068372.1;Parent=gene-VA249_RS14410;Dbxref=Genbank:WP_221068372.1;Name=WP_221068372.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461426.1;locus_tag=VA249_RS14410;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_221068372.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3116546 3117103 . - . ID=gene-VA249_RS14415;Name=VA249_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14415;old_locus_tag=VYA_26780 NZ_AP024165.1 Protein Homology CDS 3116546 3117103 . - 0 ID=cds-WP_020196744.1;Parent=gene-VA249_RS14415;Dbxref=Genbank:WP_020196744.1;Name=WP_020196744.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004739350.1;locus_tag=VA249_RS14415;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_020196744.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3117304 3117789 . + . ID=gene-VA249_RS14420;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=VA249_RS14420;old_locus_tag=VYA_26790 NZ_AP024165.1 Protein Homology CDS 3117304 3117789 . + 0 ID=cds-WP_005440742.1;Parent=gene-VA249_RS14420;Dbxref=Genbank:WP_005440742.1;Name=WP_005440742.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079087.1;locus_tag=VA249_RS14420;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_005440742.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3117794 3118927 . + . ID=gene-VA249_RS14425;Name=VA249_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14425;old_locus_tag=VYA_26800 NZ_AP024165.1 Protein Homology CDS 3117794 3118927 . + 0 ID=cds-WP_221068373.1;Parent=gene-VA249_RS14425;Dbxref=Genbank:WP_221068373.1;Name=WP_221068373.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151419.1;locus_tag=VA249_RS14425;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_221068373.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3118992 3119561 . - . ID=gene-VA249_RS14430;Name=VA249_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14430;old_locus_tag=VYA_26810 NZ_AP024165.1 Protein Homology CDS 3118992 3119561 . - 0 ID=cds-WP_221068374.1;Parent=gene-VA249_RS14430;Dbxref=Genbank:WP_221068374.1;Name=WP_221068374.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190970.1;locus_tag=VA249_RS14430;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WP_221068374.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3119584 3120060 . - . ID=gene-VA249_RS14435;Name=VA249_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14435;old_locus_tag=VYA_26820 NZ_AP024165.1 Protein Homology CDS 3119584 3120060 . - 0 ID=cds-WP_221069967.1;Parent=gene-VA249_RS14435;Dbxref=Genbank:WP_221069967.1;Name=WP_221069967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005526229.1;locus_tag=VA249_RS14435;product=DUF494 family protein;protein_id=WP_221069967.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3120066 3121175 . - . ID=gene-VA249_RS14440;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=VA249_RS14440;old_locus_tag=VYA_26830 NZ_AP024165.1 Protein Homology CDS 3120066 3121175 . - 0 ID=cds-WP_221068375.1;Parent=gene-VA249_RS14440;Dbxref=Genbank:WP_221068375.1;Name=WP_221068375.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196740.1;locus_tag=VA249_RS14440;product=DNA-processing protein DprA;protein_id=WP_221068375.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3121159 3122247 . - . ID=gene-VA249_RS14445;Name=VA249_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14445;old_locus_tag=VYA_26840 NZ_AP024165.1 Protein Homology CDS 3121159 3122247 . - 0 ID=cds-WP_221068376.1;Parent=gene-VA249_RS14445;Dbxref=Genbank:WP_221068376.1;Name=WP_221068376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005461388.1;locus_tag=VA249_RS14445;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_221068376.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3122386 3122904 . + . ID=gene-VA249_RS14450;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=VA249_RS14450;old_locus_tag=VYA_26850 NZ_AP024165.1 Protein Homology CDS 3122386 3122904 . + 0 ID=cds-WP_221068377.1;Parent=gene-VA249_RS14450;Dbxref=Genbank:WP_221068377.1;Name=WP_221068377.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009708010.1;locus_tag=VA249_RS14450;product=peptide deformylase;protein_id=WP_221068377.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3122936 3123883 . + . ID=gene-VA249_RS14455;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=VA249_RS14455;old_locus_tag=VYA_26860 NZ_AP024165.1 Protein Homology CDS 3122936 3123883 . + 0 ID=cds-WP_221068378.1;Parent=gene-VA249_RS14455;Dbxref=Genbank:WP_221068378.1;Name=WP_221068378.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535506.1;locus_tag=VA249_RS14455;product=methionyl-tRNA formyltransferase;protein_id=WP_221068378.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3123966 3125249 . + . ID=gene-VA249_RS14460;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=VA249_RS14460;old_locus_tag=VYA_26870 NZ_AP024165.1 Protein Homology CDS 3123966 3125249 . + 0 ID=cds-WP_221068379.1;Parent=gene-VA249_RS14460;Dbxref=Genbank:WP_221068379.1;Name=WP_221068379.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126637.1;locus_tag=VA249_RS14460;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_221068379.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3125314 3126690 . + . ID=gene-VA249_RS14465;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=VA249_RS14465;old_locus_tag=VYA_26880 NZ_AP024165.1 Protein Homology CDS 3125314 3126690 . + 0 ID=cds-WP_221068380.1;Parent=gene-VA249_RS14465;Dbxref=Genbank:WP_221068380.1;Name=WP_221068380.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004406496.1;locus_tag=VA249_RS14465;product=Trk system potassium transporter TrkA;protein_id=WP_221068380.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3126700 3128145 . + . ID=gene-VA249_RS14470;Name=VA249_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14470;old_locus_tag=VYA_26890 NZ_AP024165.1 Protein Homology CDS 3126700 3128145 . + 0 ID=cds-WP_221068381.1;Parent=gene-VA249_RS14470;Dbxref=Genbank:WP_221068381.1;Name=WP_221068381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008221264.1;locus_tag=VA249_RS14470;product=TrkH family potassium uptake protein;protein_id=WP_221068381.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3128171 3128785 . + . ID=gene-VA249_RS14475;Name=VA249_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14475;old_locus_tag=VYA_26900 NZ_AP024165.1 Protein Homology CDS 3128171 3128785 . + 0 ID=cds-WP_221068382.1;Parent=gene-VA249_RS14475;Dbxref=Genbank:WP_221068382.1;Name=WP_221068382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444686.1;locus_tag=VA249_RS14475;product=DUF3157 family protein;protein_id=WP_221068382.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3128830 3129483 . - . ID=gene-VA249_RS14480;Name=VA249_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14480;old_locus_tag=VYA_26910 NZ_AP024165.1 Protein Homology CDS 3128830 3129483 . - 0 ID=cds-WP_128812168.1;Parent=gene-VA249_RS14480;Dbxref=Genbank:WP_128812168.1;Name=WP_128812168.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444687.1;locus_tag=VA249_RS14480;product=hemolysin III family protein;protein_id=WP_128812168.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3129556 3130362 . - . ID=gene-VA249_RS14485;Name=VA249_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14485;old_locus_tag=VYA_26920 NZ_AP024165.1 Protein Homology CDS 3129556 3130362 . - 0 ID=cds-WP_221068383.1;Parent=gene-VA249_RS14485;Dbxref=Genbank:WP_221068383.1;Name=WP_221068383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440771.1;locus_tag=VA249_RS14485;product=sporulation protein;protein_id=WP_221068383.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3130660 3130827 . + . ID=gene-VA249_RS14490;Name=VA249_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14490;old_locus_tag=VYA_26930 NZ_AP024165.1 Protein Homology CDS 3130660 3130827 . + 0 ID=cds-WP_128812170.1;Parent=gene-VA249_RS14490;Dbxref=Genbank:WP_128812170.1;Name=WP_128812170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017063012.1;locus_tag=VA249_RS14490;product=hypothetical protein;protein_id=WP_128812170.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3130951 3131217 . + . ID=gene-VA249_RS14495;Name=VA249_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14495;old_locus_tag=VYA_26940 NZ_AP024165.1 Protein Homology CDS 3130951 3131217 . + 0 ID=cds-WP_128812172.1;Parent=gene-VA249_RS14495;Dbxref=Genbank:WP_128812172.1;Name=WP_128812172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233395.1;locus_tag=VA249_RS14495;product=YihD family protein;protein_id=WP_128812172.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3131665 3133086 . + . ID=gene-VA249_RS14500;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=VA249_RS14500;old_locus_tag=VYA_26950 NZ_AP024165.1 Protein Homology CDS 3131665 3133086 . + 0 ID=cds-WP_221068384.1;Parent=gene-VA249_RS14500;Dbxref=Genbank:WP_221068384.1;Name=WP_221068384.1;Ontology_term=GO:0008535,GO:0003674;gbkey=CDS;gene=ccoG;go_function=molecular_function|0003674||IEA;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017103138.1;locus_tag=VA249_RS14500;product=cytochrome c oxidase accessory protein CcoG;protein_id=WP_221068384.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3133141 3134127 . + . ID=gene-VA249_RS14505;Name=VA249_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14505;old_locus_tag=VYA_26960 NZ_AP024165.1 Protein Homology CDS 3133141 3134127 . + 0 ID=cds-WP_221069969.1;Parent=gene-VA249_RS14505;Dbxref=Genbank:WP_221069969.1;Name=WP_221069969.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017092341.1;locus_tag=VA249_RS14505;product=serine/threonine protein kinase;protein_id=WP_221069969.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3134162 3134764 . + . ID=gene-VA249_RS14510;Name=VA249_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14510;old_locus_tag=VYA_26970 NZ_AP024165.1 Protein Homology CDS 3134162 3134764 . + 0 ID=cds-WP_221068385.1;Parent=gene-VA249_RS14510;Dbxref=Genbank:WP_221068385.1;Name=WP_221068385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429765.1;locus_tag=VA249_RS14510;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_221068385.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3134807 3135685 . - . ID=gene-VA249_RS14515;Name=VA249_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14515;old_locus_tag=VYA_26980 NZ_AP024165.1 Protein Homology CDS 3134807 3135685 . - 0 ID=cds-WP_221068386.1;Parent=gene-VA249_RS14515;Dbxref=Genbank:WP_221068386.1;Name=WP_221068386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017449322.1;locus_tag=VA249_RS14515;product=acyltransferase;protein_id=WP_221068386.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3135851 3136807 . + . ID=gene-VA249_RS14520;Name=VA249_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14520;old_locus_tag=VYA_26990 NZ_AP024165.1 Protein Homology CDS 3135851 3136807 . + 0 ID=cds-WP_128812174.1;Parent=gene-VA249_RS14520;Dbxref=Genbank:WP_128812174.1;Name=WP_128812174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190999.1;locus_tag=VA249_RS14520;product=DUF2860 domain-containing protein;protein_id=WP_128812174.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3136859 3138382 . - . ID=gene-VA249_RS14525;Name=VA249_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14525;old_locus_tag=VYA_27000 NZ_AP024165.1 Protein Homology CDS 3136859 3138382 . - 0 ID=cds-WP_221068387.1;Parent=gene-VA249_RS14525;Dbxref=Genbank:WP_221068387.1;Name=WP_221068387.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521796.1;locus_tag=VA249_RS14525;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_221068387.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3138857 3140503 . + . ID=gene-VA249_RS14530;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=VA249_RS14530;old_locus_tag=VYA_27010 NZ_AP024165.1 Protein Homology CDS 3138857 3140503 . + 0 ID=cds-WP_221068388.1;Parent=gene-VA249_RS14530;Dbxref=Genbank:WP_221068388.1;Name=WP_221068388.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001887412.1;locus_tag=VA249_RS14530;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_221068388.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3140515 3140799 . + . ID=gene-VA249_RS14535;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=VA249_RS14535;old_locus_tag=VYA_27020 NZ_AP024165.1 Protein Homology CDS 3140515 3140799 . + 0 ID=cds-WP_005440786.1;Parent=gene-VA249_RS14535;Dbxref=Genbank:WP_005440786.1;Name=WP_005440786.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378958.1;locus_tag=VA249_RS14535;product=acetolactate synthase 2 small subunit;protein_id=WP_005440786.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3140812 3141750 . + . ID=gene-VA249_RS14540;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=VA249_RS14540;old_locus_tag=VYA_27030 NZ_AP024165.1 Protein Homology CDS 3140812 3141750 . + 0 ID=cds-WP_005429790.1;Parent=gene-VA249_RS14540;Dbxref=Genbank:WP_005429790.1;Name=WP_005429790.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635602.1;locus_tag=VA249_RS14540;product=branched-chain-amino-acid transaminase;protein_id=WP_005429790.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3141764 3143605 . + . ID=gene-VA249_RS14545;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=VA249_RS14545;old_locus_tag=VYA_27040 NZ_AP024165.1 Protein Homology CDS 3141764 3143605 . + 0 ID=cds-WP_221068389.1;Parent=gene-VA249_RS14545;Dbxref=Genbank:WP_221068389.1;Name=WP_221068389.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001887410.1;locus_tag=VA249_RS14545;product=dihydroxy-acid dehydratase;protein_id=WP_221068389.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3143609 3145156 . + . ID=gene-VA249_RS14550;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=VA249_RS14550;old_locus_tag=VYA_27050 NZ_AP024165.1 Protein Homology CDS 3143609 3145156 . + 0 ID=cds-WP_211915686.1;Parent=gene-VA249_RS14550;Dbxref=Genbank:WP_211915686.1;Name=WP_211915686.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433249.1;locus_tag=VA249_RS14550;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_211915686.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3145215 3146117 . - . ID=gene-VA249_RS14555;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=VA249_RS14555;old_locus_tag=VYA_27060 NZ_AP024165.1 Protein Homology CDS 3145215 3146117 . - 0 ID=cds-WP_221068390.1;Parent=gene-VA249_RS14555;Dbxref=Genbank:WP_221068390.1;Name=WP_221068390.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010444705.1;locus_tag=VA249_RS14555;product=DNA-binding transcriptional activator PunR;protein_id=WP_221068390.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3146272 3147477 . + . ID=gene-VA249_RS14560;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=VA249_RS14560;old_locus_tag=VYA_27070 NZ_AP024165.1 Protein Homology CDS 3146272 3147477 . + 0 ID=cds-WP_221068391.1;Parent=gene-VA249_RS14560;Dbxref=Genbank:WP_221068391.1;Name=WP_221068391.1;Ontology_term=GO:1990961,GO:0042910,GO:0016021;gbkey=CDS;gene=punC;go_component=integral component of membrane|0016021||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451019.1;locus_tag=VA249_RS14560;product=purine nucleoside transporter PunC;protein_id=WP_221068391.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3147563 3148924 . - . ID=gene-VA249_RS14565;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=VA249_RS14565;old_locus_tag=VYA_27080 NZ_AP024165.1 Protein Homology CDS 3147563 3148924 . - 0 ID=cds-WP_221068392.1;Parent=gene-VA249_RS14565;Dbxref=Genbank:WP_221068392.1;Name=WP_221068392.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004743572.1;locus_tag=VA249_RS14565;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_221068392.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3149073 3149495 . - . ID=gene-VA249_RS14570;Name=VA249_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14570;old_locus_tag=VYA_27090 NZ_AP024165.1 Protein Homology CDS 3149073 3149495 . - 0 ID=cds-WP_099080480.1;Parent=gene-VA249_RS14570;Dbxref=Genbank:WP_099080480.1;Name=WP_099080480.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000719050.1;locus_tag=VA249_RS14570;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_099080480.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3149514 3150917 . - . ID=gene-VA249_RS14575;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=VA249_RS14575;old_locus_tag=VYA_27100 NZ_AP024165.1 Protein Homology CDS 3149514 3150917 . - 0 ID=cds-WP_128812190.1;Parent=gene-VA249_RS14575;Dbxref=Genbank:WP_128812190.1;Name=WP_128812190.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017024246.1;locus_tag=VA249_RS14575;product=F0F1 ATP synthase subunit beta;protein_id=WP_128812190.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3150953 3151819 . - . ID=gene-VA249_RS14580;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=VA249_RS14580;old_locus_tag=VYA_27110 NZ_AP024165.1 Protein Homology CDS 3150953 3151819 . - 0 ID=cds-WP_128812192.1;Parent=gene-VA249_RS14580;Dbxref=Genbank:WP_128812192.1;Name=WP_128812192.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006073057.1;locus_tag=VA249_RS14580;product=F0F1 ATP synthase subunit gamma;protein_id=WP_128812192.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3151864 3153405 . - . ID=gene-VA249_RS14585;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=VA249_RS14585;old_locus_tag=VYA_27120 NZ_AP024165.1 Protein Homology CDS 3151864 3153405 . - 0 ID=cds-WP_128812194.1;Parent=gene-VA249_RS14585;Dbxref=Genbank:WP_128812194.1;Name=WP_128812194.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013570873.1;locus_tag=VA249_RS14585;product=F0F1 ATP synthase subunit alpha;protein_id=WP_128812194.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3153419 3153952 . - . ID=gene-VA249_RS14590;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=VA249_RS14590;old_locus_tag=VYA_27130 NZ_AP024165.1 Protein Homology CDS 3153419 3153952 . - 0 ID=cds-WP_211915680.1;Parent=gene-VA249_RS14590;Dbxref=Genbank:WP_211915680.1;Name=WP_211915680.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233415.1;locus_tag=VA249_RS14590;product=F0F1 ATP synthase subunit delta;protein_id=WP_211915680.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3153967 3154437 . - . ID=gene-VA249_RS14595;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=VA249_RS14595;old_locus_tag=VYA_27140 NZ_AP024165.1 Protein Homology CDS 3153967 3154437 . - 0 ID=cds-WP_128812198.1;Parent=gene-VA249_RS14595;Dbxref=Genbank:WP_128812198.1;Name=WP_128812198.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012551446.1;locus_tag=VA249_RS14595;product=F0F1 ATP synthase subunit B;protein_id=WP_128812198.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3154494 3154751 . - . ID=gene-VA249_RS14600;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=VA249_RS14600;old_locus_tag=VYA_27150 NZ_AP024165.1 Protein Homology CDS 3154494 3154751 . - 0 ID=cds-WP_005372317.1;Parent=gene-VA249_RS14600;Dbxref=Genbank:WP_005372317.1;Name=WP_005372317.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005372317.1;locus_tag=VA249_RS14600;product=F0F1 ATP synthase subunit C;protein_id=WP_005372317.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3154807 3155619 . - . ID=gene-VA249_RS14605;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=VA249_RS14605;old_locus_tag=VYA_27160 NZ_AP024165.1 Protein Homology CDS 3154807 3155619 . - 0 ID=cds-WP_010444751.1;Parent=gene-VA249_RS14605;Dbxref=Genbank:WP_010444751.1;Name=WP_010444751.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729879.1;locus_tag=VA249_RS14605;product=F0F1 ATP synthase subunit A;protein_id=WP_010444751.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3155628 3156017 . - . ID=gene-VA249_RS14610;Name=VA249_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14610;old_locus_tag=VYA_27170 NZ_AP024165.1 Protein Homology CDS 3155628 3156017 . - 0 ID=cds-WP_128812200.1;Parent=gene-VA249_RS14610;Dbxref=Genbank:WP_128812200.1;Name=WP_128812200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005497457.1;locus_tag=VA249_RS14610;product=F0F1 ATP synthase subunit I;protein_id=WP_128812200.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3156207 3157088 . - . ID=gene-VA249_RS14615;Name=VA249_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14615;old_locus_tag=VYA_27180 NZ_AP024165.1 Protein Homology CDS 3156207 3157088 . - 0 ID=cds-WP_128812202.1;Parent=gene-VA249_RS14615;Dbxref=Genbank:WP_128812202.1;Name=WP_128812202.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440814.1;locus_tag=VA249_RS14615;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_128812202.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3157112 3157885 . - . ID=gene-VA249_RS14620;Name=VA249_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14620;old_locus_tag=VYA_27190 NZ_AP024165.1 Protein Homology CDS 3157112 3157885 . - 0 ID=cds-WP_221068393.1;Parent=gene-VA249_RS14620;Dbxref=Genbank:WP_221068393.1;Name=WP_221068393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017077301.1;locus_tag=VA249_RS14620;product=ParA family protein;protein_id=WP_221068393.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3157896 3158531 . - . ID=gene-VA249_RS14625;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=VA249_RS14625;old_locus_tag=VYA_27200 NZ_AP024165.1 Protein Homology CDS 3157896 3158531 . - 0 ID=cds-WP_221068394.1;Parent=gene-VA249_RS14625;Dbxref=Genbank:WP_221068394.1;Name=WP_221068394.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079045.1;locus_tag=VA249_RS14625;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_221068394.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3158531 3160426 . - . ID=gene-VA249_RS14630;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=VA249_RS14630;old_locus_tag=VYA_27210 NZ_AP024165.1 Protein Homology CDS 3158531 3160426 . - 0 ID=cds-WP_221068395.1;Parent=gene-VA249_RS14630;Dbxref=Genbank:WP_221068395.1;Name=WP_221068395.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012126661.1;locus_tag=VA249_RS14630;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_221068395.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3160896 3161336 . - . ID=gene-VA249_RS14635;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=VA249_RS14635;old_locus_tag=VYA_27220 NZ_AP024165.1 Protein Homology CDS 3160896 3161336 . - 0 ID=cds-WP_128809800.1;Parent=gene-VA249_RS14635;Dbxref=Genbank:WP_128809800.1;Name=WP_128809800.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005424936.1;locus_tag=VA249_RS14635;product=FMN-binding protein MioC;protein_id=WP_128809800.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3161440 3162801 . - . ID=gene-VA249_RS14640;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=VA249_RS14640;old_locus_tag=VYA_27230 NZ_AP024165.1 Protein Homology CDS 3161440 3162801 . - 0 ID=cds-WP_128809801.1;Parent=gene-VA249_RS14640;Dbxref=Genbank:WP_128809801.1;Name=WP_128809801.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005476209.1;locus_tag=VA249_RS14640;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_128809801.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3162934 3164556 . - . ID=gene-VA249_RS14645;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=VA249_RS14645;old_locus_tag=VYA_27240 NZ_AP024165.1 Protein Homology CDS 3162934 3164556 . - 0 ID=cds-WP_221068396.1;Parent=gene-VA249_RS14645;Dbxref=Genbank:WP_221068396.1;Name=WP_221068396.1;Ontology_term=GO:0032977,GO:0016021;gbkey=CDS;gene=yidC;go_component=integral component of membrane|0016021||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010319954.1;locus_tag=VA249_RS14645;product=membrane protein insertase YidC;protein_id=WP_221068396.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3164559 3164816 . - . ID=gene-VA249_RS14650;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=VA249_RS14650 NZ_AP024165.1 Protein Homology CDS 3164559 3164816 . - 0 ID=cds-WP_099080494.1;Parent=gene-VA249_RS14650;Dbxref=Genbank:WP_099080494.1;Name=WP_099080494.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004739274.1;locus_tag=VA249_RS14650;product=membrane protein insertion efficiency factor YidD;protein_id=WP_099080494.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3164783 3165106 . - . ID=gene-VA249_RS14655;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=VA249_RS14655;old_locus_tag=VYA_27250 NZ_AP024165.1 Protein Homology CDS 3164783 3165106 . - 0 ID=cds-WP_241214344.1;Parent=gene-VA249_RS14655;Dbxref=Genbank:WP_241214344.1;Name=WP_241214344.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006957457.1;locus_tag=VA249_RS14655;product=ribonuclease P protein component;protein_id=WP_241214344.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3165153 3165287 . - . ID=gene-VA249_RS14660;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=VA249_RS14660;old_locus_tag=VYA_27260 NZ_AP024165.1 Protein Homology CDS 3165153 3165287 . - 0 ID=cds-WP_005378825.1;Parent=gene-VA249_RS14660;Dbxref=Genbank:WP_005378825.1;Name=WP_005378825.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005378825.1;locus_tag=VA249_RS14660;product=50S ribosomal protein L34;protein_id=WP_005378825.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3165531 3166268 . - . ID=gene-VA249_RS14665;Name=VA249_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14665;old_locus_tag=VYA_27270 NZ_AP024165.1 Protein Homology CDS 3165531 3166268 . - 0 ID=cds-WP_128809804.1;Parent=gene-VA249_RS14665;Dbxref=Genbank:WP_128809804.1;Name=WP_128809804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017081730.1;locus_tag=VA249_RS14665;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_128809804.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3166265 3166936 . - . ID=gene-VA249_RS14670;Name=VA249_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14670;old_locus_tag=VYA_27280 NZ_AP024165.1 Protein Homology CDS 3166265 3166936 . - 0 ID=cds-WP_221068397.1;Parent=gene-VA249_RS14670;Dbxref=Genbank:WP_221068397.1;Name=WP_221068397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011079037.1;locus_tag=VA249_RS14670;product=amino acid ABC transporter permease;protein_id=WP_221068397.1;transl_table=11 NZ_AP024165.1 RefSeq gene 3167045 3167806 . - . ID=gene-VA249_RS14675;Name=VA249_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14675;old_locus_tag=VYA_27290 NZ_AP024165.1 Protein Homology CDS 3167045 3167806 . - 0 ID=cds-WP_221068398.1;Parent=gene-VA249_RS14675;Dbxref=Genbank:WP_221068398.1;Name=WP_221068398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841261.1;locus_tag=VA249_RS14675;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_221068398.1;transl_table=11 ##sequence-region NZ_AP024166.1 1 1553697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1074311 NZ_AP024166.1 RefSeq region 1 1553697 . + . ID=NZ_AP024166.1:1..1553697;Dbxref=taxon:1074311;Is_circular=true;Name=2;chromosome=2;collection-date=2004-05-14;country=Japan:Kagawa;gbkey=Src;genome=chromosome;isolation-source=sediment [ENVO_00002007];lat-lon=34.381478 N 134.100808 E;mol_type=genomic DNA;strain=04Ya108 NZ_AP024166.1 RefSeq gene 911 1900 . + . ID=gene-VA249_RS14685;Name=VA249_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14685;old_locus_tag=VYA_27300 NZ_AP024166.1 Protein Homology CDS 911 1900 . + 0 ID=cds-WP_211918961.1;Parent=gene-VA249_RS14685;Dbxref=Genbank:WP_211918961.1;Name=WP_211918961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006879419.1;locus_tag=VA249_RS14685;product=sugar ABC transporter permease;protein_id=WP_211918961.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1902 2786 . + . ID=gene-VA249_RS14690;Name=VA249_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14690;old_locus_tag=VYA_27310 NZ_AP024166.1 Protein Homology CDS 1902 2786 . + 0 ID=cds-WP_211918209.1;Parent=gene-VA249_RS14690;Dbxref=Genbank:WP_211918209.1;Name=WP_211918209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130277.1;locus_tag=VA249_RS14690;product=carbohydrate ABC transporter permease;protein_id=WP_211918209.1;transl_table=11 NZ_AP024166.1 RefSeq gene 2812 4161 . + . ID=gene-VA249_RS14695;Name=VA249_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14695;old_locus_tag=VYA_27320 NZ_AP024166.1 Protein Homology CDS 2812 4161 . + 0 ID=cds-WP_221071108.1;Parent=gene-VA249_RS14695;Dbxref=Genbank:WP_221071108.1;Name=WP_221071108.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195086.1;locus_tag=VA249_RS14695;product=GH1 family beta-glucosidase;protein_id=WP_221071108.1;transl_table=11 NZ_AP024166.1 RefSeq gene 4161 5255 . + . ID=gene-VA249_RS14700;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=VA249_RS14700;old_locus_tag=VYA_27330 NZ_AP024166.1 Protein Homology CDS 4161 5255 . + 0 ID=cds-WP_211918205.1;Parent=gene-VA249_RS14700;Dbxref=Genbank:WP_211918205.1;Name=WP_211918205.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004748470.1;locus_tag=VA249_RS14700;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_211918205.1;transl_table=11 NZ_AP024166.1 RefSeq gene 5495 6514 . + . ID=gene-VA249_RS14705;Name=VA249_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14705;old_locus_tag=VYA_27340 NZ_AP024166.1 Protein Homology CDS 5495 6514 . + 0 ID=cds-WP_221071110.1;Parent=gene-VA249_RS14705;Dbxref=Genbank:WP_221071110.1;Name=WP_221071110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130275.1;locus_tag=VA249_RS14705;product=substrate-binding domain-containing protein;protein_id=WP_221071110.1;transl_table=11 NZ_AP024166.1 RefSeq gene 6511 7326 . - . ID=gene-VA249_RS14710;Name=VA249_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14710;old_locus_tag=VYA_27350 NZ_AP024166.1 Protein Homology CDS 6511 7326 . - 0 ID=cds-WP_221071112.1;Parent=gene-VA249_RS14710;Dbxref=Genbank:WP_221071112.1;Name=WP_221071112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017029322.1;locus_tag=VA249_RS14710;product=transporter substrate-binding domain-containing protein;protein_id=WP_221071112.1;transl_table=11 NZ_AP024166.1 RefSeq gene 7849 9483 . + . ID=gene-VA249_RS14715;Name=VA249_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14715;old_locus_tag=VYA_27360 NZ_AP024166.1 Protein Homology CDS 7849 9483 . + 0 ID=cds-WP_221071114.1;Parent=gene-VA249_RS14715;Dbxref=Genbank:WP_221071114.1;Name=WP_221071114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001914851.1;locus_tag=VA249_RS14715;product=ABC transporter substrate-binding protein;protein_id=WP_221071114.1;transl_table=11 NZ_AP024166.1 RefSeq gene 9586 10560 . + . ID=gene-VA249_RS14720;Name=VA249_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14720;old_locus_tag=VYA_27370 NZ_AP024166.1 Protein Homology CDS 9586 10560 . + 0 ID=cds-WP_211918197.1;Parent=gene-VA249_RS14720;Dbxref=Genbank:WP_211918197.1;Name=WP_211918197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017421770.1;locus_tag=VA249_RS14720;product=ABC transporter permease;protein_id=WP_211918197.1;transl_table=11 NZ_AP024166.1 RefSeq gene 10569 11561 . + . ID=gene-VA249_RS14725;Name=VA249_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14725;old_locus_tag=VYA_27380 NZ_AP024166.1 Protein Homology CDS 10569 11561 . + 0 ID=cds-WP_221071116.1;Parent=gene-VA249_RS14725;Dbxref=Genbank:WP_221071116.1;Name=WP_221071116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428391.1;locus_tag=VA249_RS14725;product=ABC transporter permease;protein_id=WP_221071116.1;transl_table=11 NZ_AP024166.1 RefSeq gene 11558 12511 . + . ID=gene-VA249_RS14730;Name=VA249_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14730;old_locus_tag=VYA_27390 NZ_AP024166.1 Protein Homology CDS 11558 12511 . + 0 ID=cds-WP_211918195.1;Parent=gene-VA249_RS14730;Dbxref=Genbank:WP_211918195.1;Name=WP_211918195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151560.1;locus_tag=VA249_RS14730;product=ABC transporter ATP-binding protein;protein_id=WP_211918195.1;transl_table=11 NZ_AP024166.1 RefSeq gene 12525 13508 . + . ID=gene-VA249_RS14735;Name=VA249_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14735;old_locus_tag=VYA_27400 NZ_AP024166.1 Protein Homology CDS 12525 13508 . + 0 ID=cds-WP_221071118.1;Parent=gene-VA249_RS14735;Dbxref=Genbank:WP_221071118.1;Name=WP_221071118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428304.1;locus_tag=VA249_RS14735;product=ABC transporter ATP-binding protein;protein_id=WP_221071118.1;transl_table=11 NZ_AP024166.1 RefSeq gene 13575 17024 . + . ID=gene-VA249_RS14740;Name=VA249_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14740;old_locus_tag=VYA_27410 NZ_AP024166.1 Protein Homology CDS 13575 17024 . + 0 ID=cds-WP_221071120.1;Parent=gene-VA249_RS14740;Dbxref=Genbank:WP_221071120.1;Name=WP_221071120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706764.1;locus_tag=VA249_RS14740;product=hypothetical protein;protein_id=WP_221071120.1;transl_table=11 NZ_AP024166.1 RefSeq gene 17156 18160 . - . ID=gene-VA249_RS14745;Name=VA249_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14745;old_locus_tag=VYA_27420 NZ_AP024166.1 Protein Homology CDS 17156 18160 . - 0 ID=cds-WP_221071122.1;Parent=gene-VA249_RS14745;Dbxref=Genbank:WP_221071122.1;Name=WP_221071122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453519.1;locus_tag=VA249_RS14745;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_221071122.1;transl_table=11 NZ_AP024166.1 RefSeq gene 18811 20109 . + . ID=gene-VA249_RS14750;Name=VA249_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14750;old_locus_tag=VYA_27430 NZ_AP024166.1 Protein Homology CDS 18811 20109 . + 0 ID=cds-WP_221071124.1;Parent=gene-VA249_RS14750;Dbxref=Genbank:WP_221071124.1;Name=WP_221071124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706750.1;locus_tag=VA249_RS14750;product=carbohydrate porin;protein_id=WP_221071124.1;transl_table=11 NZ_AP024166.1 RefSeq gene 20360 21181 . + . ID=gene-VA249_RS14755;Name=VA249_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14755;old_locus_tag=VYA_27440 NZ_AP024166.1 Protein Homology CDS 20360 21181 . + 0 ID=cds-WP_221071126.1;Parent=gene-VA249_RS14755;Dbxref=Genbank:WP_221071126.1;Name=WP_221071126.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706769.1;locus_tag=VA249_RS14755;product=family 16 glycosylhydrolase;protein_id=WP_221071126.1;transl_table=11 NZ_AP024166.1 RefSeq gene 21167 22084 . - . ID=gene-VA249_RS14760;Name=VA249_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14760;old_locus_tag=VYA_27450 NZ_AP024166.1 Protein Homology CDS 21167 22084 . - 0 ID=cds-WP_221071128.1;Parent=gene-VA249_RS14760;Dbxref=Genbank:WP_221071128.1;Name=WP_221071128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706770.1;locus_tag=VA249_RS14760;product=AraC family transcriptional regulator;protein_id=WP_221071128.1;transl_table=11 NZ_AP024166.1 RefSeq gene 22341 25115 . + . ID=gene-VA249_RS14765;Name=VA249_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14765;old_locus_tag=VYA_27460 NZ_AP024166.1 Protein Homology CDS 22341 25115 . + 0 ID=cds-WP_221071138.1;Parent=gene-VA249_RS14765;Dbxref=Genbank:WP_221071138.1;Name=WP_221071138.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706771.1;locus_tag=VA249_RS14765;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_221071138.1;transl_table=11 NZ_AP024166.1 RefSeq gene 25310 26650 . + . ID=gene-VA249_RS14770;Name=VA249_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14770;old_locus_tag=VYA_27470 NZ_AP024166.1 Protein Homology CDS 25310 26650 . + 0 ID=cds-WP_221071148.1;Parent=gene-VA249_RS14770;Dbxref=Genbank:WP_221071148.1;Name=WP_221071148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428322.1;locus_tag=VA249_RS14770;product=MATE family efflux transporter;protein_id=WP_221071148.1;transl_table=11 NZ_AP024166.1 RefSeq gene 26777 28213 . - . ID=gene-VA249_RS14775;Name=VA249_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14775;old_locus_tag=VYA_27480 NZ_AP024166.1 Protein Homology CDS 26777 28213 . - 0 ID=cds-WP_221067583.1-15;Parent=gene-VA249_RS14775;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS14775;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024166.1 RefSeq gene 28358 29434 . - . ID=gene-VA249_RS14780;Name=VA249_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14780;old_locus_tag=VYA_27490 NZ_AP024166.1 Protein Homology CDS 28358 29434 . - 0 ID=cds-WP_221071150.1;Parent=gene-VA249_RS14780;Dbxref=Genbank:WP_221071150.1;Name=WP_221071150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004409933.1;locus_tag=VA249_RS14780;product=TRAP transporter substrate-binding protein;protein_id=WP_221071150.1;transl_table=11 NZ_AP024166.1 RefSeq gene 29721 31400 . - . ID=gene-VA249_RS14785;Name=VA249_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14785;old_locus_tag=VYA_27500 NZ_AP024166.1 Protein Homology CDS 29721 31400 . - 0 ID=cds-WP_221071152.1;Parent=gene-VA249_RS14785;Dbxref=Genbank:WP_221071152.1;Name=WP_221071152.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195089.1;locus_tag=VA249_RS14785;product=RluA family pseudouridine synthase;protein_id=WP_221071152.1;transl_table=11 NZ_AP024166.1 RefSeq gene 31631 32437 . + . ID=gene-VA249_RS14790;Name=VA249_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14790;old_locus_tag=VYA_27510 NZ_AP024166.1 Protein Homology CDS 31631 32437 . + 0 ID=cds-WP_221071154.1;Parent=gene-VA249_RS14790;Dbxref=Genbank:WP_221071154.1;Name=WP_221071154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195092.1;locus_tag=VA249_RS14790;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_221071154.1;transl_table=11 NZ_AP024166.1 RefSeq gene 32552 32956 . - . ID=gene-VA249_RS14795;Name=VA249_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14795;old_locus_tag=VYA_27520 NZ_AP024166.1 Protein Homology CDS 32552 32956 . - 0 ID=cds-WP_221071156.1;Parent=gene-VA249_RS14795;Dbxref=Genbank:WP_221071156.1;Name=WP_221071156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130271.1;locus_tag=VA249_RS14795;product=hypothetical protein;protein_id=WP_221071156.1;transl_table=11 NZ_AP024166.1 RefSeq gene 32967 34055 . - . ID=gene-VA249_RS14800;Name=VA249_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14800;old_locus_tag=VYA_27530 NZ_AP024166.1 Protein Homology CDS 32967 34055 . - 0 ID=cds-WP_221071158.1;Parent=gene-VA249_RS14800;Dbxref=Genbank:WP_221071158.1;Name=WP_221071158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453473.1;locus_tag=VA249_RS14800;product=GGDEF domain-containing protein;protein_id=WP_221071158.1;transl_table=11 NZ_AP024166.1 RefSeq gene 34086 34538 . - . ID=gene-VA249_RS14805;Name=VA249_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14805;old_locus_tag=VYA_27540 NZ_AP024166.1 Protein Homology CDS 34086 34538 . - 0 ID=cds-WP_221071160.1;Parent=gene-VA249_RS14805;Dbxref=Genbank:WP_221071160.1;Name=WP_221071160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633833.1;locus_tag=VA249_RS14805;product=oxidoreductase;protein_id=WP_221071160.1;transl_table=11 NZ_AP024166.1 RefSeq gene 34700 35065 . + . ID=gene-VA249_RS14810;Name=VA249_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14810;old_locus_tag=VYA_27550 NZ_AP024166.1 Protein Homology CDS 34700 35065 . + 0 ID=cds-WP_128812455.1;Parent=gene-VA249_RS14810;Dbxref=Genbank:WP_128812455.1;Name=WP_128812455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428270.1;locus_tag=VA249_RS14810;product=DUF805 domain-containing protein;protein_id=WP_128812455.1;transl_table=11 NZ_AP024166.1 RefSeq gene 35191 36030 . - . ID=gene-VA249_RS14815;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=VA249_RS14815;old_locus_tag=VYA_27560 NZ_AP024166.1 Protein Homology CDS 35191 36030 . - 0 ID=cds-WP_221071170.1;Parent=gene-VA249_RS14815;Dbxref=Genbank:WP_221071170.1;Name=WP_221071170.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374382.1;locus_tag=VA249_RS14815;product=S-formylglutathione hydrolase;protein_id=WP_221071170.1;transl_table=11 NZ_AP024166.1 RefSeq gene 36185 37333 . - . ID=gene-VA249_RS14820;Name=VA249_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14820;old_locus_tag=VYA_27570 NZ_AP024166.1 Protein Homology CDS 36185 37333 . - 0 ID=cds-WP_221071173.1;Parent=gene-VA249_RS14820;Dbxref=Genbank:WP_221071173.1;Name=WP_221071173.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004732902.1;locus_tag=VA249_RS14820;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_221071173.1;transl_table=11 NZ_AP024166.1 RefSeq gene 37627 38421 . + . ID=gene-VA249_RS14825;Name=VA249_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14825;old_locus_tag=VYA_27580 NZ_AP024166.1 Protein Homology CDS 37627 38421 . + 0 ID=cds-WP_221071175.1;Parent=gene-VA249_RS14825;Dbxref=Genbank:WP_221071175.1;Name=WP_221071175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130266.1;locus_tag=VA249_RS14825;product=arylamine N-acetyltransferase;protein_id=WP_221071175.1;transl_table=11 NZ_AP024166.1 RefSeq gene 38577 39446 . + . ID=gene-VA249_RS14830;Name=VA249_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14830;old_locus_tag=VYA_27590 NZ_AP024166.1 Protein Homology CDS 38577 39446 . + 0 ID=cds-WP_221071177.1;Parent=gene-VA249_RS14830;Dbxref=Genbank:WP_221071177.1;Name=WP_221071177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533134.1;locus_tag=VA249_RS14830;product=LysR substrate-binding domain-containing protein;protein_id=WP_221071177.1;transl_table=11 NZ_AP024166.1 RefSeq gene 39538 40311 . - . ID=gene-VA249_RS14835;Name=VA249_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14835;old_locus_tag=VYA_27600 NZ_AP024166.1 Protein Homology CDS 39538 40311 . - 0 ID=cds-WP_221071179.1;Parent=gene-VA249_RS14835;Dbxref=Genbank:WP_221071179.1;Name=WP_221071179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818356.1;locus_tag=VA249_RS14835;product=siderophore-interacting protein;protein_id=WP_221071179.1;transl_table=11 NZ_AP024166.1 RefSeq gene 40571 42490 . - . ID=gene-VA249_RS14840;Name=VA249_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14840;old_locus_tag=VYA_27610 NZ_AP024166.1 Protein Homology CDS 40571 42490 . - 0 ID=cds-WP_221071181.1;Parent=gene-VA249_RS14840;Dbxref=Genbank:WP_221071181.1;Name=WP_221071181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195104.1;locus_tag=VA249_RS14840;product=S9 family peptidase;protein_id=WP_221071181.1;transl_table=11 NZ_AP024166.1 RefSeq gene 42489 42632 . + . ID=gene-VA249_RS14845;Name=VA249_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14845 NZ_AP024166.1 GeneMarkS-2+ CDS 42489 42632 . + 0 ID=cds-WP_221071183.1;Parent=gene-VA249_RS14845;Dbxref=Genbank:WP_221071183.1;Name=WP_221071183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS14845;product=hypothetical protein;protein_id=WP_221071183.1;transl_table=11 NZ_AP024166.1 RefSeq gene 42768 43352 . - . ID=gene-VA249_RS14850;Name=VA249_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14850;old_locus_tag=VYA_27620 NZ_AP024166.1 Protein Homology CDS 42768 43352 . - 0 ID=cds-WP_221071192.1;Parent=gene-VA249_RS14850;Dbxref=Genbank:WP_221071192.1;Name=WP_221071192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195105.1;locus_tag=VA249_RS14850;product=LysE family translocator;protein_id=WP_221071192.1;transl_table=11 NZ_AP024166.1 RefSeq gene 43501 43941 . + . ID=gene-VA249_RS14855;Name=VA249_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14855;old_locus_tag=VYA_27630 NZ_AP024166.1 Protein Homology CDS 43501 43941 . + 0 ID=cds-WP_221071193.1;Parent=gene-VA249_RS14855;Dbxref=Genbank:WP_221071193.1;Name=WP_221071193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821023.1;locus_tag=VA249_RS14855;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_221071193.1;transl_table=11 NZ_AP024166.1 RefSeq gene 43971 44606 . - . ID=gene-VA249_RS14860;Name=VA249_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14860;old_locus_tag=VYA_27640 NZ_AP024166.1 Protein Homology CDS 43971 44606 . - 0 ID=cds-WP_221071194.1;Parent=gene-VA249_RS14860;Dbxref=Genbank:WP_221071194.1;Name=WP_221071194.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195108.1;locus_tag=VA249_RS14860;product=HAD-IB family hydrolase;protein_id=WP_221071194.1;transl_table=11 NZ_AP024166.1 RefSeq gene 44622 44951 . - . ID=gene-VA249_RS14865;Name=VA249_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14865;old_locus_tag=VYA_27650 NZ_AP024166.1 Protein Homology CDS 44622 44951 . - 0 ID=cds-WP_221071195.1;Parent=gene-VA249_RS14865;Dbxref=Genbank:WP_221071195.1;Name=WP_221071195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533114.1;locus_tag=VA249_RS14865;product=multidrug efflux SMR transporter;protein_id=WP_221071195.1;transl_table=11 NZ_AP024166.1 RefSeq gene 45078 45968 . - . ID=gene-VA249_RS14870;Name=VA249_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14870;old_locus_tag=VYA_27660 NZ_AP024166.1 Protein Homology CDS 45078 45968 . - 0 ID=cds-WP_221071196.1;Parent=gene-VA249_RS14870;Dbxref=Genbank:WP_221071196.1;Name=WP_221071196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017104092.1;locus_tag=VA249_RS14870;product=LysR family transcriptional regulator;protein_id=WP_221071196.1;transl_table=11 NZ_AP024166.1 RefSeq gene 46077 47471 . + . ID=gene-VA249_RS14875;Name=VA249_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14875;old_locus_tag=VYA_27670 NZ_AP024166.1 Protein Homology CDS 46077 47471 . + 0 ID=cds-WP_225927138.1;Parent=gene-VA249_RS14875;Dbxref=Genbank:WP_225927138.1;Name=WP_225927138.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453441.1;locus_tag=VA249_RS14875;product=MATE family efflux transporter;protein_id=WP_225927138.1;transl_table=11 NZ_AP024166.1 RefSeq gene 47477 47716 . + . ID=gene-VA249_RS14880;Name=VA249_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14880;old_locus_tag=VYA_27680 NZ_AP024166.1 Protein Homology CDS 47477 47716 . + 0 ID=cds-WP_211918148.1;Parent=gene-VA249_RS14880;Dbxref=Genbank:WP_211918148.1;Name=WP_211918148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453439.1;locus_tag=VA249_RS14880;product=hypothetical protein;protein_id=WP_211918148.1;transl_table=11 NZ_AP024166.1 RefSeq gene 47968 48279 . - . ID=gene-VA249_RS14885;Name=VA249_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14885;old_locus_tag=VYA_27700 NZ_AP024166.1 Protein Homology CDS 47968 48279 . - 0 ID=cds-WP_221071198.1;Parent=gene-VA249_RS14885;Dbxref=Genbank:WP_221071198.1;Name=WP_221071198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447046.1;locus_tag=VA249_RS14885;product=cupin domain-containing protein;protein_id=WP_221071198.1;transl_table=11 NZ_AP024166.1 RefSeq gene 48288 48938 . - . ID=gene-VA249_RS14890;Name=VA249_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14890;old_locus_tag=VYA_27710 NZ_AP024166.1 Protein Homology CDS 48288 48938 . - 0 ID=cds-WP_221071200.1;Parent=gene-VA249_RS14890;Dbxref=Genbank:WP_221071200.1;Name=WP_221071200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130250.1;locus_tag=VA249_RS14890;product=Qnr family pentapeptide repeat protein;protein_id=WP_221071200.1;transl_table=11 NZ_AP024166.1 RefSeq gene 49451 50092 . + . ID=gene-VA249_RS14895;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=VA249_RS14895;old_locus_tag=VYA_27720 NZ_AP024166.1 Protein Homology CDS 49451 50092 . + 0 ID=cds-WP_221071202.1;Parent=gene-VA249_RS14895;Dbxref=Genbank:WP_221071202.1;Name=WP_221071202.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814589.1;locus_tag=VA249_RS14895;product=outer membrane protein OmpW;protein_id=WP_221071202.1;transl_table=11 NZ_AP024166.1 RefSeq gene 50532 51503 . + . ID=gene-VA249_RS14900;Name=VA249_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14900;old_locus_tag=VYA_27730 NZ_AP024166.1 Protein Homology CDS 50532 51503 . + 0 ID=cds-WP_221071204.1;Parent=gene-VA249_RS14900;Dbxref=Genbank:WP_221071204.1;Name=WP_221071204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598638.1;locus_tag=VA249_RS14900;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_221071204.1;transl_table=11 NZ_AP024166.1 RefSeq gene 51612 54215 . + . ID=gene-VA249_RS14905;Name=VA249_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14905;old_locus_tag=VYA_27740 NZ_AP024166.1 Protein Homology CDS 51612 54215 . + 0 ID=cds-WP_221071206.1;Parent=gene-VA249_RS14905;Dbxref=Genbank:WP_221071206.1;Name=WP_221071206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447315.1;locus_tag=VA249_RS14905;product=TRAP transporter permease;protein_id=WP_221071206.1;transl_table=11 NZ_AP024166.1 RefSeq gene 54659 55684 . + . ID=gene-VA249_RS14910;Name=VA249_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14910;old_locus_tag=VYA_27750 NZ_AP024166.1 Protein Homology CDS 54659 55684 . + 0 ID=cds-WP_128812467.1;Parent=gene-VA249_RS14910;Dbxref=Genbank:WP_128812467.1;Name=WP_128812467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453427.1;locus_tag=VA249_RS14910;product=HlyD family secretion protein;protein_id=WP_128812467.1;transl_table=11 NZ_AP024166.1 RefSeq gene 55681 57168 . + . ID=gene-VA249_RS14915;Name=VA249_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14915;old_locus_tag=VYA_27760 NZ_AP024166.1 Protein Homology CDS 55681 57168 . + 0 ID=cds-WP_221071208.1;Parent=gene-VA249_RS14915;Dbxref=Genbank:WP_221071208.1;Name=WP_221071208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195114.1;locus_tag=VA249_RS14915;product=multidrug efflux MFS transporter;protein_id=WP_221071208.1;transl_table=11 NZ_AP024166.1 RefSeq gene 57380 57625 . - . ID=gene-VA249_RS14920;Name=VA249_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14920;old_locus_tag=VYA_27770 NZ_AP024166.1 Protein Homology CDS 57380 57625 . - 0 ID=cds-WP_221071211.1;Parent=gene-VA249_RS14920;Dbxref=Genbank:WP_221071211.1;Name=WP_221071211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130247.1;locus_tag=VA249_RS14920;product=Rho-binding antiterminator;protein_id=WP_221071211.1;transl_table=11 NZ_AP024166.1 RefSeq gene 57652 58077 . - . ID=gene-VA249_RS14925;Name=VA249_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14925;old_locus_tag=VYA_27780 NZ_AP024166.1 Protein Homology CDS 57652 58077 . - 0 ID=cds-WP_221071212.1;Parent=gene-VA249_RS14925;Dbxref=Genbank:WP_221071212.1;Name=WP_221071212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843882.1;locus_tag=VA249_RS14925;product=VOC family protein;protein_id=WP_221071212.1;transl_table=11 NZ_AP024166.1 RefSeq gene 58187 58783 . - . ID=gene-VA249_RS14930;Name=VA249_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14930;old_locus_tag=VYA_27790 NZ_AP024166.1 Protein Homology CDS 58187 58783 . - 0 ID=cds-WP_221071214.1;Parent=gene-VA249_RS14930;Dbxref=Genbank:WP_221071214.1;Name=WP_221071214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447333.1;locus_tag=VA249_RS14930;product=LysE/ArgO family amino acid transporter;protein_id=WP_221071214.1;transl_table=11 NZ_AP024166.1 RefSeq gene 59150 60241 . + . ID=gene-VA249_RS14935;Name=VA249_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14935;old_locus_tag=VYA_27800 NZ_AP024166.1 Protein Homology CDS 59150 60241 . + 0 ID=cds-WP_221071217.1;Parent=gene-VA249_RS14935;Dbxref=Genbank:WP_221071217.1;Name=WP_221071217.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012550610.1;locus_tag=VA249_RS14935;product=methyl-accepting chemotaxis protein;protein_id=WP_221071217.1;transl_table=11 NZ_AP024166.1 RefSeq gene 60334 60819 . - . ID=gene-VA249_RS14940;Name=VA249_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14940;old_locus_tag=VYA_27810 NZ_AP024166.1 Protein Homology CDS 60334 60819 . - 0 ID=cds-WP_128812472.1;Parent=gene-VA249_RS14940;Dbxref=Genbank:WP_128812472.1;Name=WP_128812472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017022609.1;locus_tag=VA249_RS14940;product=VOC family protein;protein_id=WP_128812472.1;transl_table=11 NZ_AP024166.1 RefSeq gene 60958 61275 . - . ID=gene-VA249_RS14945;Name=VA249_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14945;old_locus_tag=VYA_27820 NZ_AP024166.1 Protein Homology CDS 60958 61275 . - 0 ID=cds-WP_221071219.1;Parent=gene-VA249_RS14945;Dbxref=Genbank:WP_221071219.1;Name=WP_221071219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391927.1;locus_tag=VA249_RS14945;product=DUF4144 domain-containing protein;protein_id=WP_221071219.1;transl_table=11 NZ_AP024166.1 RefSeq gene 61408 61698 . - . ID=gene-VA249_RS14950;Name=VA249_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14950;old_locus_tag=VYA_27830 NZ_AP024166.1 Protein Homology CDS 61408 61698 . - 0 ID=cds-WP_221071221.1;Parent=gene-VA249_RS14950;Dbxref=Genbank:WP_221071221.1;Name=WP_221071221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016767356.1;locus_tag=VA249_RS14950;product=antibiotic biosynthesis monooxygenase;protein_id=WP_221071221.1;transl_table=11 NZ_AP024166.1 RefSeq gene 61842 62378 . - . ID=gene-VA249_RS14955;Name=VA249_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14955;old_locus_tag=VYA_27840 NZ_AP024166.1 Protein Homology CDS 61842 62378 . - 0 ID=cds-WP_221071223.1;Parent=gene-VA249_RS14955;Dbxref=Genbank:WP_221071223.1;Name=WP_221071223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843890.1;locus_tag=VA249_RS14955;product=DUF924 family protein;protein_id=WP_221071223.1;transl_table=11 NZ_AP024166.1 RefSeq gene 62449 64296 . - . ID=gene-VA249_RS14960;Name=VA249_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14960;old_locus_tag=VYA_27850 NZ_AP024166.1 Protein Homology CDS 62449 64296 . - 0 ID=cds-WP_221071224.1;Parent=gene-VA249_RS14960;Dbxref=Genbank:WP_221071224.1;Name=WP_221071224.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017062727.1;locus_tag=VA249_RS14960;product=M3 family metallopeptidase;protein_id=WP_221071224.1;transl_table=11 NZ_AP024166.1 RefSeq gene 64482 64655 . - . ID=gene-VA249_RS14965;Name=VA249_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14965;old_locus_tag=VYA_27860 NZ_AP024166.1 Protein Homology CDS 64482 64655 . - 0 ID=cds-WP_128812475.1;Parent=gene-VA249_RS14965;Dbxref=Genbank:WP_128812475.1;Name=WP_128812475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233493.1;locus_tag=VA249_RS14965;product=hypothetical protein;protein_id=WP_128812475.1;transl_table=11 NZ_AP024166.1 RefSeq gene 64946 65233 . + . ID=gene-VA249_RS14970;Name=VA249_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14970;old_locus_tag=VYA_27870 NZ_AP024166.1 Protein Homology CDS 64946 65233 . + 0 ID=cds-WP_128813489.1;Parent=gene-VA249_RS14970;Dbxref=Genbank:WP_128813489.1;Name=WP_128813489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428383.1;locus_tag=VA249_RS14970;product=hypothetical protein;protein_id=WP_128813489.1;transl_table=11 NZ_AP024166.1 RefSeq gene 65627 66178 . + . ID=gene-VA249_RS14975;Name=VA249_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14975;old_locus_tag=VYA_27880 NZ_AP024166.1 Protein Homology CDS 65627 66178 . + 0 ID=cds-WP_221071225.1;Parent=gene-VA249_RS14975;Dbxref=Genbank:WP_221071225.1;Name=WP_221071225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706826.1;locus_tag=VA249_RS14975;product=type II secretion system GspH family protein;protein_id=WP_221071225.1;transl_table=11 NZ_AP024166.1 RefSeq gene 66325 66753 . - . ID=gene-VA249_RS14980;Name=VA249_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14980;old_locus_tag=VYA_27890 NZ_AP024166.1 Protein Homology CDS 66325 66753 . - 0 ID=cds-WP_221071226.1;Parent=gene-VA249_RS14980;Dbxref=Genbank:WP_221071226.1;Name=WP_221071226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130211.1;locus_tag=VA249_RS14980;product=MarR family transcriptional regulator;protein_id=WP_221071226.1;transl_table=11 NZ_AP024166.1 RefSeq gene 66764 67402 . - . ID=gene-VA249_RS14985;Name=VA249_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14985;old_locus_tag=VYA_27900 NZ_AP024166.1 Protein Homology CDS 66764 67402 . - 0 ID=cds-WP_221072177.1;Parent=gene-VA249_RS14985;Dbxref=Genbank:WP_221072177.1;Name=WP_221072177.1;Ontology_term=GO:0009055,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130210.1;locus_tag=VA249_RS14985;product=cytochrome b/b6 domain-containing protein;protein_id=WP_221072177.1;transl_table=11 NZ_AP024166.1 RefSeq gene 67532 68011 . + . ID=gene-VA249_RS14990;Name=VA249_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14990;old_locus_tag=VYA_27910 NZ_AP024166.1 Protein Homology CDS 67532 68011 . + 0 ID=cds-WP_221071227.1;Parent=gene-VA249_RS14990;Dbxref=Genbank:WP_221071227.1;Name=WP_221071227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453372.1;locus_tag=VA249_RS14990;product=cytochrome c;protein_id=WP_221071227.1;transl_table=11 NZ_AP024166.1 RefSeq gene 67993 68508 . - . ID=gene-VA249_RS14995;Name=VA249_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14995;old_locus_tag=VYA_27920 NZ_AP024166.1 Protein Homology CDS 67993 68508 . - 0 ID=cds-WP_221071228.1;Parent=gene-VA249_RS14995;Dbxref=Genbank:WP_221071228.1;Name=WP_221071228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447019.1;locus_tag=VA249_RS14995;product=GNAT family N-acetyltransferase;protein_id=WP_221071228.1;transl_table=11 NZ_AP024166.1 RefSeq gene 68578 69042 . - . ID=gene-VA249_RS15000;Name=VA249_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15000;old_locus_tag=VYA_27930 NZ_AP024166.1 Protein Homology CDS 68578 69042 . - 0 ID=cds-WP_221071229.1;Parent=gene-VA249_RS15000;Dbxref=Genbank:WP_221071229.1;Name=WP_221071229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374312.1;locus_tag=VA249_RS15000;product=HAD family hydrolase;protein_id=WP_221071229.1;transl_table=11 NZ_AP024166.1 RefSeq gene 69295 70389 . + . ID=gene-VA249_RS15005;Name=VA249_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15005;old_locus_tag=VYA_27940 NZ_AP024166.1 Protein Homology CDS 69295 70389 . + 0 ID=cds-WP_221071230.1;Parent=gene-VA249_RS15005;Dbxref=Genbank:WP_221071230.1;Name=WP_221071230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002031718.1;locus_tag=VA249_RS15005;product=NapC/NirT family cytochrome c;protein_id=WP_221071230.1;transl_table=11 NZ_AP024166.1 RefSeq gene 70413 72860 . + . ID=gene-VA249_RS15010;Name=VA249_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15010;old_locus_tag=VYA_27950 NZ_AP024166.1 Protein Homology CDS 70413 72860 . + 0 ID=cds-WP_221071231.1;Parent=gene-VA249_RS15010;Dbxref=Genbank:WP_221071231.1;Name=WP_221071231.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161724.1;locus_tag=VA249_RS15010;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_221071231.1;transl_table=11 NZ_AP024166.1 RefSeq gene 72947 73672 . - . ID=gene-VA249_RS15015;Name=VA249_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15015;old_locus_tag=VYA_27960 NZ_AP024166.1 Protein Homology CDS 72947 73672 . - 0 ID=cds-WP_221071233.1;Parent=gene-VA249_RS15015;Dbxref=Genbank:WP_221071233.1;Name=WP_221071233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130200.1;locus_tag=VA249_RS15015;product=phosphatase PAP2 family protein;protein_id=WP_221071233.1;transl_table=11 NZ_AP024166.1 RefSeq gene 73868 74482 . - . ID=gene-VA249_RS15020;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=VA249_RS15020;old_locus_tag=VYA_27970 NZ_AP024166.1 Protein Homology CDS 73868 74482 . - 0 ID=cds-WP_221071235.1;Parent=gene-VA249_RS15020;Dbxref=Genbank:WP_221071235.1;Name=WP_221071235.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634354.1;locus_tag=VA249_RS15020;product=thiamine phosphate synthase;protein_id=WP_221071235.1;transl_table=11 NZ_AP024166.1 RefSeq gene 74547 75338 . - . ID=gene-VA249_RS15025;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=VA249_RS15025;old_locus_tag=VYA_27980 NZ_AP024166.1 Protein Homology CDS 74547 75338 . - 0 ID=cds-WP_221071237.1;Parent=gene-VA249_RS15025;Dbxref=Genbank:WP_221071237.1;Name=WP_221071237.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818226.1;locus_tag=VA249_RS15025;product=hydroxyethylthiazole kinase;protein_id=WP_221071237.1;transl_table=11 NZ_AP024166.1 RefSeq gene 75351 76019 . - . ID=gene-VA249_RS15030;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=VA249_RS15030;old_locus_tag=VYA_27990 NZ_AP024166.1 Protein Homology CDS 75351 76019 . - 0 ID=cds-WP_221071239.1;Parent=gene-VA249_RS15030;Dbxref=Genbank:WP_221071239.1;Name=WP_221071239.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706841.1;locus_tag=VA249_RS15030;product=thiaminase II;protein_id=WP_221071239.1;transl_table=11 NZ_AP024166.1 RefSeq gene 76074 77024 . - . ID=gene-VA249_RS15035;Name=VA249_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15035;old_locus_tag=VYA_28000 NZ_AP024166.1 Protein Homology CDS 76074 77024 . - 0 ID=cds-WP_221071241.1;Parent=gene-VA249_RS15035;Dbxref=Genbank:WP_221071241.1;Name=WP_221071241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015312798.1;locus_tag=VA249_RS15035;product=ABC transporter substrate-binding protein;protein_id=WP_221071241.1;transl_table=11 NZ_AP024166.1 RefSeq gene 77072 77872 . - . ID=gene-VA249_RS15040;Name=VA249_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15040;old_locus_tag=VYA_28010 NZ_AP024166.1 Protein Homology CDS 77072 77872 . - 0 ID=cds-WP_221071243.1;Parent=gene-VA249_RS15040;Dbxref=Genbank:WP_221071243.1;Name=WP_221071243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697279.1;locus_tag=VA249_RS15040;product=ABC transporter permease;protein_id=WP_221071243.1;transl_table=11 NZ_AP024166.1 RefSeq gene 77865 78629 . - . ID=gene-VA249_RS15045;Name=VA249_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15045;old_locus_tag=VYA_28020 NZ_AP024166.1 Protein Homology CDS 77865 78629 . - 0 ID=cds-WP_221071245.1;Parent=gene-VA249_RS15045;Dbxref=Genbank:WP_221071245.1;Name=WP_221071245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008080768.1;locus_tag=VA249_RS15045;product=ABC transporter ATP-binding protein;protein_id=WP_221071245.1;transl_table=11 NZ_AP024166.1 RefSeq gene 78619 79512 . - . ID=gene-VA249_RS15050;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=VA249_RS15050;old_locus_tag=VYA_28030 NZ_AP024166.1 Protein Homology CDS 78619 79512 . - 0 ID=cds-WP_221071247.1;Parent=gene-VA249_RS15050;Dbxref=Genbank:WP_221071247.1;Name=WP_221071247.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534805.1;locus_tag=VA249_RS15050;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_221071247.1;transl_table=11 NZ_AP024166.1 cmsearch riboswitch 79625 79734 . - . ID=id-NZ_AP024166.1:79625..79734;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024166.1 RefSeq gene 80131 81516 . + . ID=gene-VA249_RS15055;Name=VA249_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15055;old_locus_tag=VYA_28040 NZ_AP024166.1 Protein Homology CDS 80131 81516 . + 0 ID=cds-WP_221071250.1;Parent=gene-VA249_RS15055;Dbxref=Genbank:WP_221071250.1;Name=WP_221071250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449507.1;locus_tag=VA249_RS15055;product=TldD/PmbA family protein;protein_id=WP_221071250.1;transl_table=11 NZ_AP024166.1 RefSeq gene 81516 82859 . + . ID=gene-VA249_RS15060;Name=VA249_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15060;old_locus_tag=VYA_28050 NZ_AP024166.1 Protein Homology CDS 81516 82859 . + 0 ID=cds-WP_221071261.1;Parent=gene-VA249_RS15060;Dbxref=Genbank:WP_221071261.1;Name=WP_221071261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233510.1;locus_tag=VA249_RS15060;product=TldD/PmbA family protein;protein_id=WP_221071261.1;transl_table=11 NZ_AP024166.1 RefSeq gene 82929 83528 . - . ID=gene-VA249_RS15065;Name=trmY;gbkey=Gene;gene=trmY;gene_biotype=protein_coding;locus_tag=VA249_RS15065;old_locus_tag=VYA_28060 NZ_AP024166.1 Protein Homology CDS 82929 83528 . - 0 ID=cds-WP_005374282.1;Parent=gene-VA249_RS15065;Dbxref=Genbank:WP_005374282.1;Name=WP_005374282.1;gbkey=CDS;gene=trmY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634347.1;locus_tag=VA249_RS15065;product=tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY;protein_id=WP_005374282.1;transl_table=11 NZ_AP024166.1 RefSeq gene 83777 84301 . + . ID=gene-VA249_RS15070;Name=VA249_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15070;old_locus_tag=VYA_28070 NZ_AP024166.1 Protein Homology CDS 83777 84301 . + 0 ID=cds-WP_221071263.1;Parent=gene-VA249_RS15070;Dbxref=Genbank:WP_221071263.1;Name=WP_221071263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195167.1;locus_tag=VA249_RS15070;product=DUF3087 family protein;protein_id=WP_221071263.1;transl_table=11 NZ_AP024166.1 RefSeq gene 84771 86323 . + . ID=gene-VA249_RS15075;Name=VA249_RS15075;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS15075;old_locus_tag=VYA_r00380 NZ_AP024166.1 cmsearch rRNA 84771 86323 . + . ID=rna-VA249_RS15075;Parent=gene-VA249_RS15075;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS15075;product=16S ribosomal RNA NZ_AP024166.1 cmsearch exon 84771 86323 . + . ID=exon-VA249_RS15075-1;Parent=rna-VA249_RS15075;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS15075;product=16S ribosomal RNA NZ_AP024166.1 RefSeq gene 86414 86489 . + . ID=gene-VA249_RS15080;Name=VA249_RS15080;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS15080;old_locus_tag=VYA_t01200 NZ_AP024166.1 tRNAscan-SE tRNA 86414 86489 . + . ID=rna-VA249_RS15080;Parent=gene-VA249_RS15080;anticodon=(pos:86448..86450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15080;product=tRNA-Glu NZ_AP024166.1 tRNAscan-SE exon 86414 86489 . + . ID=exon-VA249_RS15080-1;Parent=rna-VA249_RS15080;anticodon=(pos:86448..86450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15080;product=tRNA-Glu NZ_AP024166.1 RefSeq gene 86492 86567 . + . ID=gene-VA249_RS15085;Name=VA249_RS15085;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS15085;old_locus_tag=VYA_t01210 NZ_AP024166.1 tRNAscan-SE tRNA 86492 86567 . + . ID=rna-VA249_RS15085;Parent=gene-VA249_RS15085;anticodon=(pos:86525..86527);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15085;product=tRNA-Lys NZ_AP024166.1 tRNAscan-SE exon 86492 86567 . + . ID=exon-VA249_RS15085-1;Parent=rna-VA249_RS15085;anticodon=(pos:86525..86527);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15085;product=tRNA-Lys NZ_AP024166.1 RefSeq gene 86596 86671 . + . ID=gene-VA249_RS15090;Name=VA249_RS15090;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS15090;old_locus_tag=VYA_t01220 NZ_AP024166.1 tRNAscan-SE tRNA 86596 86671 . + . ID=rna-VA249_RS15090;Parent=gene-VA249_RS15090;anticodon=(pos:86629..86631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15090;product=tRNA-Ala NZ_AP024166.1 tRNAscan-SE exon 86596 86671 . + . ID=exon-VA249_RS15090-1;Parent=rna-VA249_RS15090;anticodon=(pos:86629..86631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15090;product=tRNA-Ala NZ_AP024166.1 RefSeq gene 86707 86782 . + . ID=gene-VA249_RS15095;Name=VA249_RS15095;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS15095;old_locus_tag=VYA_t01230 NZ_AP024166.1 tRNAscan-SE tRNA 86707 86782 . + . ID=rna-VA249_RS15095;Parent=gene-VA249_RS15095;anticodon=(pos:86740..86742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15095;product=tRNA-Val NZ_AP024166.1 tRNAscan-SE exon 86707 86782 . + . ID=exon-VA249_RS15095-1;Parent=rna-VA249_RS15095;anticodon=(pos:86740..86742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15095;product=tRNA-Val NZ_AP024166.1 RefSeq gene 87111 90003 . + . ID=gene-VA249_RS15100;Name=VA249_RS15100;gbkey=Gene;gene_biotype=rRNA;locus_tag=VA249_RS15100;old_locus_tag=VYA_r00390 NZ_AP024166.1 cmsearch rRNA 87111 90003 . + . ID=rna-VA249_RS15100;Parent=gene-VA249_RS15100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS15100;product=23S ribosomal RNA NZ_AP024166.1 cmsearch exon 87111 90003 . + . ID=exon-VA249_RS15100-1;Parent=rna-VA249_RS15100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS15100;product=23S ribosomal RNA NZ_AP024166.1 RefSeq gene 90095 90211 . + . ID=gene-VA249_RS15105;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VA249_RS15105;old_locus_tag=VYA_r00400 NZ_AP024166.1 cmsearch rRNA 90095 90211 . + . ID=rna-VA249_RS15105;Parent=gene-VA249_RS15105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS15105;product=5S ribosomal RNA NZ_AP024166.1 cmsearch exon 90095 90211 . + . ID=exon-VA249_RS15105-1;Parent=rna-VA249_RS15105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=VA249_RS15105;product=5S ribosomal RNA NZ_AP024166.1 RefSeq gene 90302 90392 . + . ID=gene-VA249_RS15110;Name=VA249_RS15110;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS15110;old_locus_tag=VYA_t01240 NZ_AP024166.1 tRNAscan-SE tRNA 90302 90392 . + . ID=rna-VA249_RS15110;Parent=gene-VA249_RS15110;anticodon=(pos:90336..90338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15110;product=tRNA-Ser NZ_AP024166.1 tRNAscan-SE exon 90302 90392 . + . ID=exon-VA249_RS15110-1;Parent=rna-VA249_RS15110;anticodon=(pos:90336..90338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15110;product=tRNA-Ser NZ_AP024166.1 RefSeq gene 90770 91549 . + . ID=gene-VA249_RS15115;Name=VA249_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15115;old_locus_tag=VYA_28080 NZ_AP024166.1 Protein Homology CDS 90770 91549 . + 0 ID=cds-WP_221071265.1;Parent=gene-VA249_RS15115;Dbxref=Genbank:WP_221071265.1;Name=WP_221071265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386527.1;locus_tag=VA249_RS15115;product=hypothetical protein;protein_id=WP_221071265.1;transl_table=11 NZ_AP024166.1 RefSeq gene 92042 92392 . + . ID=gene-VA249_RS15120;Name=VA249_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15120;old_locus_tag=VYA_28100 NZ_AP024166.1 Protein Homology CDS 92042 92392 . + 0 ID=cds-WP_221071267.1;Parent=gene-VA249_RS15120;Dbxref=Genbank:WP_221071267.1;Name=WP_221071267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704536.1;locus_tag=VA249_RS15120;product=DUF3147 family protein;protein_id=WP_221071267.1;transl_table=11 NZ_AP024166.1 RefSeq gene 92515 92871 . - . ID=gene-VA249_RS15125;Name=VA249_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15125;old_locus_tag=VYA_28110 NZ_AP024166.1 Protein Homology CDS 92515 92871 . - 0 ID=cds-WP_211918098.1;Parent=gene-VA249_RS15125;Dbxref=Genbank:WP_211918098.1;Name=WP_211918098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233515.1;locus_tag=VA249_RS15125;product=YibL family ribosome-associated protein;protein_id=WP_211918098.1;transl_table=11 NZ_AP024166.1 RefSeq gene 92956 93951 . - . ID=gene-VA249_RS15130;Name=VA249_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15130;old_locus_tag=VYA_28120 NZ_AP024166.1 Protein Homology CDS 92956 93951 . - 0 ID=cds-WP_221071268.1;Parent=gene-VA249_RS15130;Dbxref=Genbank:WP_221071268.1;Name=WP_221071268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453311.1;locus_tag=VA249_RS15130;product=2-hydroxyacid dehydrogenase;protein_id=WP_221071268.1;transl_table=11 NZ_AP024166.1 RefSeq gene 94231 94713 . + . ID=gene-VA249_RS15135;Name=VA249_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15135;old_locus_tag=VYA_28130 NZ_AP024166.1 Protein Homology CDS 94231 94713 . + 0 ID=cds-WP_221071270.1;Parent=gene-VA249_RS15135;Dbxref=Genbank:WP_221071270.1;Name=WP_221071270.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453241.1;locus_tag=VA249_RS15135;product=L%2CD-transpeptidase family protein;protein_id=WP_221071270.1;transl_table=11 NZ_AP024166.1 RefSeq gene 94753 95463 . - . ID=gene-VA249_RS15140;Name=VA249_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15140;old_locus_tag=VYA_28140 NZ_AP024166.1 Protein Homology CDS 94753 95463 . - 0 ID=cds-WP_221071272.1;Parent=gene-VA249_RS15140;Dbxref=Genbank:WP_221071272.1;Name=WP_221071272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705142.1;locus_tag=VA249_RS15140;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_221071272.1;transl_table=11 NZ_AP024166.1 RefSeq gene 95689 96357 . + . ID=gene-VA249_RS15145;Name=VA249_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15145;old_locus_tag=VYA_28150 NZ_AP024166.1 Protein Homology CDS 95689 96357 . + 0 ID=cds-WP_221071274.1;Parent=gene-VA249_RS15145;Dbxref=Genbank:WP_221071274.1;Name=WP_221071274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438307.1;locus_tag=VA249_RS15145;product=response regulator transcription factor;protein_id=WP_221071274.1;transl_table=11 NZ_AP024166.1 RefSeq gene 96354 97727 . + . ID=gene-VA249_RS15150;Name=VA249_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15150;old_locus_tag=VYA_28160 NZ_AP024166.1 Protein Homology CDS 96354 97727 . + 0 ID=cds-WP_221071276.1;Parent=gene-VA249_RS15150;Dbxref=Genbank:WP_221071276.1;Name=WP_221071276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188518.1;locus_tag=VA249_RS15150;product=histidine kinase sensor domain-containing protein;protein_id=WP_221071276.1;transl_table=11 NZ_AP024166.1 RefSeq gene 97903 99996 . + . ID=gene-VA249_RS15155;Name=VA249_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15155;old_locus_tag=VYA_28170 NZ_AP024166.1 Protein Homology CDS 97903 99996 . + 0 ID=cds-WP_221071278.1;Parent=gene-VA249_RS15155;Dbxref=Genbank:WP_221071278.1;Name=WP_221071278.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005479624.1;locus_tag=VA249_RS15155;product=TonB-dependent siderophore receptor;protein_id=WP_221071278.1;transl_table=11 NZ_AP024166.1 RefSeq gene 100072 100839 . + . ID=gene-VA249_RS15160;Name=VA249_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15160;old_locus_tag=VYA_28180 NZ_AP024166.1 Protein Homology CDS 100072 100839 . + 0 ID=cds-WP_221071280.1;Parent=gene-VA249_RS15160;Dbxref=Genbank:WP_221071280.1;Name=WP_221071280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017071483.1;locus_tag=VA249_RS15160;product=DUF3450 family protein;protein_id=WP_221071280.1;transl_table=11 NZ_AP024166.1 RefSeq gene 100840 102240 . + . ID=gene-VA249_RS15165;Name=VA249_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15165;old_locus_tag=VYA_28190 NZ_AP024166.1 Protein Homology CDS 100840 102240 . + 0 ID=cds-WP_221071282.1;Parent=gene-VA249_RS15165;Dbxref=Genbank:WP_221071282.1;Name=WP_221071282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130142.1;locus_tag=VA249_RS15165;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_221071282.1;transl_table=11 NZ_AP024166.1 RefSeq gene 102240 102794 . + . ID=gene-VA249_RS15170;Name=VA249_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15170;old_locus_tag=VYA_28200 NZ_AP024166.1 Protein Homology CDS 102240 102794 . + 0 ID=cds-WP_221071283.1;Parent=gene-VA249_RS15170;Dbxref=Genbank:WP_221071283.1;Name=WP_221071283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741219.1;locus_tag=VA249_RS15170;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_221071283.1;transl_table=11 NZ_AP024166.1 RefSeq gene 102791 103195 . + . ID=gene-VA249_RS15175;Name=VA249_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15175;old_locus_tag=VYA_28210 NZ_AP024166.1 Protein Homology CDS 102791 103195 . + 0 ID=cds-WP_128812508.1;Parent=gene-VA249_RS15175;Dbxref=Genbank:WP_128812508.1;Name=WP_128812508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453291.1;locus_tag=VA249_RS15175;product=biopolymer transporter ExbD;protein_id=WP_128812508.1;transl_table=11 NZ_AP024166.1 RefSeq gene 103195 103815 . + . ID=gene-VA249_RS15180;Name=VA249_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15180;old_locus_tag=VYA_28220 NZ_AP024166.1 Protein Homology CDS 103195 103815 . + 0 ID=cds-WP_221071285.1;Parent=gene-VA249_RS15180;Dbxref=Genbank:WP_221071285.1;Name=WP_221071285.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009843861.1;locus_tag=VA249_RS15180;product=TonB family protein;protein_id=WP_221071285.1;transl_table=11 NZ_AP024166.1 RefSeq gene 103812 104984 . + . ID=gene-VA249_RS15185;Name=VA249_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15185;old_locus_tag=VYA_28230 NZ_AP024166.1 Protein Homology CDS 103812 104984 . + 0 ID=cds-WP_221071287.1;Parent=gene-VA249_RS15185;Dbxref=Genbank:WP_221071287.1;Name=WP_221071287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005438295.1;locus_tag=VA249_RS15185;product=hypothetical protein;protein_id=WP_221071287.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 105142 105313 . + . ID=gene-VA249_RS24115;Name=VA249_RS24115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24115;partial=true;pseudo=true;start_range=.,105142 NZ_AP024166.1 Protein Homology CDS 105142 105313 . + 0 ID=cds-VA249_RS24115;Parent=gene-VA249_RS24115;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432606.1;locus_tag=VA249_RS24115;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,105142;transl_table=11 NZ_AP024166.1 RefSeq gene 105529 106587 . + . ID=gene-VA249_RS15190;Name=VA249_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15190;old_locus_tag=VYA_28240 NZ_AP024166.1 Protein Homology CDS 105529 106587 . + 0 ID=cds-WP_221071289.1;Parent=gene-VA249_RS15190;Dbxref=Genbank:WP_221071289.1;Name=WP_221071289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741232.1;locus_tag=VA249_RS15190;product=porin;protein_id=WP_221071289.1;transl_table=11 NZ_AP024166.1 RefSeq gene 106748 108913 . - . ID=gene-VA249_RS15195;Name=VA249_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15195;old_locus_tag=VYA_28250 NZ_AP024166.1 Protein Homology CDS 106748 108913 . - 0 ID=cds-WP_221071291.1;Parent=gene-VA249_RS15195;Dbxref=Genbank:WP_221071291.1;Name=WP_221071291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017080938.1;locus_tag=VA249_RS15195;product=S9 family peptidase;protein_id=WP_221071291.1;transl_table=11 NZ_AP024166.1 RefSeq gene 109167 110372 . - . ID=gene-VA249_RS15200;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=VA249_RS15200;old_locus_tag=VYA_28260 NZ_AP024166.1 Protein Homology CDS 109167 110372 . - 0 ID=cds-WP_221071293.1;Parent=gene-VA249_RS15200;Dbxref=Genbank:WP_221071293.1;Name=WP_221071293.1;Ontology_term=GO:0042908,GO:0042910,GO:0016021;gbkey=CDS;gene=emrD;go_component=integral component of membrane|0016021||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196803.1;locus_tag=VA249_RS15200;product=multidrug efflux MFS transporter EmrD;protein_id=WP_221071293.1;transl_table=11 NZ_AP024166.1 RefSeq gene 110635 111555 . - . ID=gene-VA249_RS15205;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=VA249_RS15205;old_locus_tag=VYA_28270 NZ_AP024166.1 Protein Homology CDS 110635 111555 . - 0 ID=cds-WP_039976066.1;Parent=gene-VA249_RS15205;Dbxref=Genbank:WP_039976066.1;Name=WP_039976066.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741236.1;locus_tag=VA249_RS15205;product=agmatinase;protein_id=WP_039976066.1;transl_table=11 NZ_AP024166.1 RefSeq gene 111557 113467 . - . ID=gene-VA249_RS15210;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=VA249_RS15210;old_locus_tag=VYA_28280 NZ_AP024166.1 Protein Homology CDS 111557 113467 . - 0 ID=cds-WP_221071300.1;Parent=gene-VA249_RS15210;Dbxref=Genbank:WP_221071300.1;Name=WP_221071300.1;Ontology_term=GO:0008295,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002031460.1;locus_tag=VA249_RS15210;product=arginine decarboxylase;protein_id=WP_221071300.1;transl_table=11 NZ_AP024166.1 RefSeq gene 113838 114572 . + . ID=gene-VA249_RS15215;Name=VA249_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15215;old_locus_tag=VYA_28290 NZ_AP024166.1 Protein Homology CDS 113838 114572 . + 0 ID=cds-WP_221072178.1;Parent=gene-VA249_RS15215;Dbxref=Genbank:WP_221072178.1;Name=WP_221072178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233534.1;locus_tag=VA249_RS15215;product=MBL fold metallo-hydrolase;protein_id=WP_221072178.1;transl_table=11 NZ_AP024166.1 RefSeq gene 114668 115096 . - . ID=gene-VA249_RS15220;Name=VA249_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15220;old_locus_tag=VYA_28300 NZ_AP024166.1 Protein Homology CDS 114668 115096 . - 0 ID=cds-WP_128812516.1;Parent=gene-VA249_RS15220;Dbxref=Genbank:WP_128812516.1;Name=WP_128812516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432588.1;locus_tag=VA249_RS15220;product=RimK/LysX family protein;protein_id=WP_128812516.1;transl_table=11 NZ_AP024166.1 RefSeq gene 115159 116064 . - . ID=gene-VA249_RS15225;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=VA249_RS15225;old_locus_tag=VYA_28310 NZ_AP024166.1 Protein Homology CDS 115159 116064 . - 0 ID=cds-WP_128812517.1;Parent=gene-VA249_RS15225;Dbxref=Genbank:WP_128812517.1;Name=WP_128812517.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007161257.1;locus_tag=VA249_RS15225;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_128812517.1;transl_table=11 NZ_AP024166.1 RefSeq gene 116432 117340 . - . ID=gene-VA249_RS15230;Name=VA249_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15230;old_locus_tag=VYA_28320 NZ_AP024166.1 Protein Homology CDS 116432 117340 . - 0 ID=cds-WP_221071301.1;Parent=gene-VA249_RS15230;Dbxref=Genbank:WP_221071301.1;Name=WP_221071301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646313.1;locus_tag=VA249_RS15230;product=LysR family transcriptional regulator;protein_id=WP_221071301.1;transl_table=11 NZ_AP024166.1 RefSeq gene 118531 118869 . - . ID=gene-VA249_RS15235;Name=VA249_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15235;old_locus_tag=VYA_28330 NZ_AP024166.1 Protein Homology CDS 118531 118869 . - 0 ID=cds-WP_128812519.1;Parent=gene-VA249_RS15235;Dbxref=Genbank:WP_128812519.1;Name=WP_128812519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334643.1;locus_tag=VA249_RS15235;product=YggL family protein;protein_id=WP_128812519.1;transl_table=11 NZ_AP024166.1 RefSeq gene 119105 121141 . + . ID=gene-VA249_RS15240;Name=VA249_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15240;old_locus_tag=VYA_28350 NZ_AP024166.1 Protein Homology CDS 119105 121141 . + 0 ID=cds-WP_221071302.1;Parent=gene-VA249_RS15240;Dbxref=Genbank:WP_221071302.1;Name=WP_221071302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005393601.1;locus_tag=VA249_RS15240;product=PhoX family phosphatase;protein_id=WP_221071302.1;transl_table=11 NZ_AP024166.1 RefSeq gene 121268 122659 . - . ID=gene-VA249_RS15245;Name=VA249_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15245;old_locus_tag=VYA_28360 NZ_AP024166.1 Protein Homology CDS 121268 122659 . - 0 ID=cds-WP_221071303.1;Parent=gene-VA249_RS15245;Dbxref=Genbank:WP_221071303.1;Name=WP_221071303.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188530.1;locus_tag=VA249_RS15245;product=family 1 glycosylhydrolase;protein_id=WP_221071303.1;transl_table=11 NZ_AP024166.1 RefSeq gene 122828 124894 . - . ID=gene-VA249_RS15250;Name=VA249_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15250;old_locus_tag=VYA_28370 NZ_AP024166.1 Protein Homology CDS 122828 124894 . - 0 ID=cds-WP_221071304.1;Parent=gene-VA249_RS15250;Dbxref=Genbank:WP_221071304.1;Name=WP_221071304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705110.1;locus_tag=VA249_RS15250;product=ATP-binding protein;protein_id=WP_221071304.1;transl_table=11 NZ_AP024166.1 RefSeq gene 125081 126448 . + . ID=gene-VA249_RS15255;Name=VA249_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15255;old_locus_tag=VYA_28380 NZ_AP024166.1 Protein Homology CDS 125081 126448 . + 0 ID=cds-WP_221071306.1;Parent=gene-VA249_RS15255;Dbxref=Genbank:WP_221071306.1;Name=WP_221071306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448032.1;locus_tag=VA249_RS15255;product=sigma-54 dependent transcriptional regulator;protein_id=WP_221071306.1;transl_table=11 NZ_AP024166.1 RefSeq gene 126607 127812 . - . ID=gene-VA249_RS15260;Name=VA249_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15260 NZ_AP024166.1 Protein Homology CDS 126607 127812 . - 0 ID=cds-WP_221071307.1;Parent=gene-VA249_RS15260;Dbxref=Genbank:WP_221071307.1;Name=WP_221071307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633347.1;locus_tag=VA249_RS15260;product=GGDEF domain-containing protein;protein_id=WP_221071307.1;transl_table=11 NZ_AP024166.1 RefSeq gene 127976 129283 . - . ID=gene-VA249_RS15265;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=VA249_RS15265;old_locus_tag=VYA_28410 NZ_AP024166.1 Protein Homology CDS 127976 129283 . - 0 ID=cds-WP_221071309.1;Parent=gene-VA249_RS15265;Dbxref=Genbank:WP_221071309.1;Name=WP_221071309.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006233752.1;locus_tag=VA249_RS15265;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_221071309.1;transl_table=11 NZ_AP024166.1 RefSeq gene 130116 131126 . + . ID=gene-VA249_RS15270;Name=VA249_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15270;old_locus_tag=VYA_28420 NZ_AP024166.1 Protein Homology CDS 130116 131126 . + 0 ID=cds-WP_221071312.1;Parent=gene-VA249_RS15270;Dbxref=Genbank:WP_221071312.1;Name=WP_221071312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635521.1;locus_tag=VA249_RS15270;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_221071312.1;transl_table=11 NZ_AP024166.1 RefSeq gene 131209 133332 . + . ID=gene-VA249_RS15275;Name=VA249_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15275;old_locus_tag=VYA_28430 NZ_AP024166.1 Protein Homology CDS 131209 133332 . + 0 ID=cds-WP_221071314.1;Parent=gene-VA249_RS15275;Dbxref=Genbank:WP_221071314.1;Name=WP_221071314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188534.1;locus_tag=VA249_RS15275;product=TRAP transporter permease;protein_id=WP_221071314.1;transl_table=11 NZ_AP024166.1 RefSeq gene 133341 134588 . + . ID=gene-VA249_RS15280;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=VA249_RS15280;old_locus_tag=VYA_28440 NZ_AP024166.1 Protein Homology CDS 133341 134588 . + 0 ID=cds-WP_221071316.1;Parent=gene-VA249_RS15280;Dbxref=Genbank:WP_221071316.1;Name=WP_221071316.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384175.1;locus_tag=VA249_RS15280;product=L-2-hydroxyglutarate oxidase;protein_id=WP_221071316.1;transl_table=11 NZ_AP024166.1 RefSeq gene 134772 135173 . - . ID=gene-VA249_RS15285;Name=VA249_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15285;old_locus_tag=VYA_28450 NZ_AP024166.1 Protein Homology CDS 134772 135173 . - 0 ID=cds-WP_128812528.1;Parent=gene-VA249_RS15285;Dbxref=Genbank:WP_128812528.1;Name=WP_128812528.1;Ontology_term=GO:0004869;gbkey=CDS;go_function=cysteine-type endopeptidase inhibitor activity|0004869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432571.1;locus_tag=VA249_RS15285;product=cystatin domain-containing protein;protein_id=WP_128812528.1;transl_table=11 NZ_AP024166.1 RefSeq gene 135535 136779 . + . ID=gene-VA249_RS15290;Name=VA249_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15290;old_locus_tag=VYA_28460 NZ_AP024166.1 Protein Homology CDS 135535 136779 . + 0 ID=cds-WP_221071318.1;Parent=gene-VA249_RS15290;Dbxref=Genbank:WP_221071318.1;Name=WP_221071318.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819725.1;locus_tag=VA249_RS15290;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_221071318.1;transl_table=11 NZ_AP024166.1 RefSeq gene 137077 138477 . + . ID=gene-VA249_RS15295;Name=VA249_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15295;old_locus_tag=VYA_28470 NZ_AP024166.1 Protein Homology CDS 137077 138477 . + 0 ID=cds-WP_211918040.1;Parent=gene-VA249_RS15295;Dbxref=Genbank:WP_211918040.1;Name=WP_211918040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453230.1;locus_tag=VA249_RS15295;product=tryptophanase;protein_id=WP_211918040.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 138576 139186 . - . ID=gene-VA249_RS15300;Name=VA249_RS15300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS15300;pseudo=true NZ_AP024166.1 Protein Homology CDS 138576 139186 . - 0 ID=cds-VA249_RS15300;Parent=gene-VA249_RS15300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188538.1;locus_tag=VA249_RS15300;product=DUF2913 family protein;pseudo=true;transl_table=11 NZ_AP024166.1 RefSeq gene 139216 139299 . - . ID=gene-VA249_RS15305;Name=VA249_RS15305;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS15305;old_locus_tag=VYA_t01250 NZ_AP024166.1 tRNAscan-SE tRNA 139216 139299 . - . ID=rna-VA249_RS15305;Parent=gene-VA249_RS15305;anticodon=(pos:complement(139263..139265));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15305;product=tRNA-Leu NZ_AP024166.1 tRNAscan-SE exon 139216 139299 . - . ID=exon-VA249_RS15305-1;Parent=rna-VA249_RS15305;anticodon=(pos:complement(139263..139265));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS15305;product=tRNA-Leu NZ_AP024166.1 RefSeq gene 139886 141094 . + . ID=gene-VA249_RS15310;Name=VA249_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15310;old_locus_tag=VYA_28500 NZ_AP024166.1 Protein Homology CDS 139886 141094 . + 0 ID=cds-WP_128812532.1;Parent=gene-VA249_RS15310;Dbxref=Genbank:WP_128812532.1;Name=WP_128812532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004729974.1;locus_tag=VA249_RS15310;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_128812532.1;transl_table=11 NZ_AP024166.1 RefSeq gene 141173 141790 . - . ID=gene-VA249_RS15315;Name=VA249_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15315;old_locus_tag=VYA_28510 NZ_AP024166.1 Protein Homology CDS 141173 141790 . - 0 ID=cds-WP_221071320.1;Parent=gene-VA249_RS15315;Dbxref=Genbank:WP_221071320.1;Name=WP_221071320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196196.1;locus_tag=VA249_RS15315;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_221071320.1;transl_table=11 NZ_AP024166.1 RefSeq gene 141896 143251 . + . ID=gene-VA249_RS15320;Name=VA249_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15320;old_locus_tag=VYA_28520 NZ_AP024166.1 Protein Homology CDS 141896 143251 . + 0 ID=cds-WP_221071322.1;Parent=gene-VA249_RS15320;Dbxref=Genbank:WP_221071322.1;Name=WP_221071322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015312835.1;locus_tag=VA249_RS15320;product=sensor domain-containing diguanylate cyclase;protein_id=WP_221071322.1;transl_table=11 NZ_AP024166.1 RefSeq gene 143618 145174 . - . ID=gene-VA249_RS15325;Name=VA249_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15325;old_locus_tag=VYA_28530 NZ_AP024166.1 Protein Homology CDS 143618 145174 . - 0 ID=cds-WP_221071324.1;Parent=gene-VA249_RS15325;Dbxref=Genbank:WP_221071324.1;Name=WP_221071324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819729.1;locus_tag=VA249_RS15325;product=DUF3612 domain-containing protein;protein_id=WP_221071324.1;transl_table=11 NZ_AP024166.1 RefSeq gene 145444 146022 . + . ID=gene-VA249_RS15330;Name=VA249_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15330;old_locus_tag=VYA_28540 NZ_AP024166.1 Protein Homology CDS 145444 146022 . + 0 ID=cds-WP_221071326.1;Parent=gene-VA249_RS15330;Dbxref=Genbank:WP_221071326.1;Name=WP_221071326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005479980.1;locus_tag=VA249_RS15330;product=hypothetical protein;protein_id=WP_221071326.1;transl_table=11 NZ_AP024166.1 RefSeq gene 146150 147163 . - . ID=gene-VA249_RS15335;Name=VA249_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15335;old_locus_tag=VYA_28550 NZ_AP024166.1 Protein Homology CDS 146150 147163 . - 0 ID=cds-WP_221071328.1;Parent=gene-VA249_RS15335;Dbxref=Genbank:WP_221071328.1;Name=WP_221071328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453351.1;locus_tag=VA249_RS15335;product=GGDEF domain-containing protein;protein_id=WP_221071328.1;transl_table=11 NZ_AP024166.1 RefSeq gene 147438 148772 . + . ID=gene-VA249_RS15340;Name=VA249_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15340 NZ_AP024166.1 Protein Homology CDS 147438 148772 . + 0 ID=cds-WP_221071330.1;Parent=gene-VA249_RS15340;Dbxref=Genbank:WP_221071330.1;Name=WP_221071330.1;Ontology_term=GO:0006281,GO:0003913;gbkey=CDS;go_function=DNA photolyase activity|0003913||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817353.1;locus_tag=VA249_RS15340;product=DASH family cryptochrome;protein_id=WP_221071330.1;transl_table=11 NZ_AP024166.1 RefSeq gene 148790 150334 . + . ID=gene-VA249_RS15345;Name=VA249_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15345;old_locus_tag=VYA_28570 NZ_AP024166.1 Protein Homology CDS 148790 150334 . + 0 ID=cds-WP_221071331.1;Parent=gene-VA249_RS15345;Dbxref=Genbank:WP_221071331.1;Name=WP_221071331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196201.1;locus_tag=VA249_RS15345;product=cryptochrome/photolyase family protein;protein_id=WP_221071331.1;transl_table=11 NZ_AP024166.1 RefSeq gene 150334 151041 . + . ID=gene-VA249_RS15350;Name=VA249_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15350;old_locus_tag=VYA_28580 NZ_AP024166.1 Protein Homology CDS 150334 151041 . + 0 ID=cds-WP_221071333.1;Parent=gene-VA249_RS15350;Dbxref=Genbank:WP_221071333.1;Name=WP_221071333.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530143.1;locus_tag=VA249_RS15350;product=SDR family oxidoreductase;protein_id=WP_221071333.1;transl_table=11 NZ_AP024166.1 RefSeq gene 151111 151254 . - . ID=gene-VA249_RS15355;Name=VA249_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15355 NZ_AP024166.1 Protein Homology CDS 151111 151254 . - 0 ID=cds-WP_221071335.1;Parent=gene-VA249_RS15355;Dbxref=Genbank:WP_221071335.1;Name=WP_221071335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450720.1;locus_tag=VA249_RS15355;product=DUF2256 domain-containing protein;protein_id=WP_221071335.1;transl_table=11 NZ_AP024166.1 RefSeq gene 151299 152441 . - . ID=gene-VA249_RS15360;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=VA249_RS15360;old_locus_tag=VYA_28590 NZ_AP024166.1 Protein Homology CDS 151299 152441 . - 0 ID=cds-WP_221071337.1;Parent=gene-VA249_RS15360;Dbxref=Genbank:WP_221071337.1;Name=WP_221071337.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130086.1;locus_tag=VA249_RS15360;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_221071337.1;transl_table=11 NZ_AP024166.1 RefSeq gene 152627 153025 . + . ID=gene-VA249_RS15365;Name=VA249_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15365;old_locus_tag=VYA_28600 NZ_AP024166.1 Protein Homology CDS 152627 153025 . + 0 ID=cds-WP_221071339.1;Parent=gene-VA249_RS15365;Dbxref=Genbank:WP_221071339.1;Name=WP_221071339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005479962.1;locus_tag=VA249_RS15365;product=OsmC family protein;protein_id=WP_221071339.1;transl_table=11 NZ_AP024166.1 RefSeq gene 153135 153686 . + . ID=gene-VA249_RS15370;Name=VA249_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15370;old_locus_tag=VYA_28610 NZ_AP024166.1 Protein Homology CDS 153135 153686 . + 0 ID=cds-WP_221071341.1;Parent=gene-VA249_RS15370;Dbxref=Genbank:WP_221071341.1;Name=WP_221071341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374130.1;locus_tag=VA249_RS15370;product=sugar O-acetyltransferase;protein_id=WP_221071341.1;transl_table=11 NZ_AP024166.1 RefSeq gene 153722 154204 . - . ID=gene-VA249_RS15375;Name=VA249_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15375;old_locus_tag=VYA_28620 NZ_AP024166.1 GeneMarkS-2+ CDS 153722 154204 . - 0 ID=cds-WP_221071343.1;Parent=gene-VA249_RS15375;Dbxref=Genbank:WP_221071343.1;Name=WP_221071343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS15375;product=hypothetical protein;protein_id=WP_221071343.1;transl_table=11 NZ_AP024166.1 RefSeq gene 154315 154479 . + . ID=gene-VA249_RS15380;Name=VA249_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15380;old_locus_tag=VYA_28630 NZ_AP024166.1 Protein Homology CDS 154315 154479 . + 0 ID=cds-WP_221071345.1;Parent=gene-VA249_RS15380;Dbxref=Genbank:WP_221071345.1;Name=WP_221071345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017053398.1;locus_tag=VA249_RS15380;product=hypothetical protein;protein_id=WP_221071345.1;transl_table=11 NZ_AP024166.1 RefSeq gene 154568 155971 . - . ID=gene-VA249_RS15385;Name=VA249_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15385;old_locus_tag=VYA_28640 NZ_AP024166.1 Protein Homology CDS 154568 155971 . - 0 ID=cds-WP_221071347.1;Parent=gene-VA249_RS15385;Dbxref=Genbank:WP_221071347.1;Name=WP_221071347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313150.1;locus_tag=VA249_RS15385;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_221071347.1;transl_table=11 NZ_AP024166.1 RefSeq gene 156233 156907 . + . ID=gene-VA249_RS15390;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=VA249_RS15390;old_locus_tag=VYA_28650 NZ_AP024166.1 Protein Homology CDS 156233 156907 . + 0 ID=cds-WP_221072180.1;Parent=gene-VA249_RS15390;Dbxref=Genbank:WP_221072180.1;Name=WP_221072180.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741276.1;locus_tag=VA249_RS15390;product=pyrimidine 5'-nucleotidase;protein_id=WP_221072180.1;transl_table=11 NZ_AP024166.1 RefSeq gene 157084 159066 . - . ID=gene-VA249_RS15395;Name=VA249_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15395;old_locus_tag=VYA_28660 NZ_AP024166.1 GeneMarkS-2+ CDS 157084 159066 . - 0 ID=cds-WP_221071349.1;Parent=gene-VA249_RS15395;Dbxref=Genbank:WP_221071349.1;Name=WP_221071349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS15395;product=hypothetical protein;protein_id=WP_221071349.1;transl_table=11 NZ_AP024166.1 RefSeq gene 159246 159707 . - . ID=gene-VA249_RS15400;Name=VA249_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15400;old_locus_tag=VYA_28670 NZ_AP024166.1 Protein Homology CDS 159246 159707 . - 0 ID=cds-WP_128812547.1;Parent=gene-VA249_RS15400;Dbxref=Genbank:WP_128812547.1;Name=WP_128812547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009844843.1;locus_tag=VA249_RS15400;product=hypothetical protein;protein_id=WP_128812547.1;transl_table=11 NZ_AP024166.1 RefSeq gene 159954 160493 . + . ID=gene-VA249_RS15405;Name=VA249_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15405;old_locus_tag=VYA_28680 NZ_AP024166.1 Protein Homology CDS 159954 160493 . + 0 ID=cds-WP_128812548.1;Parent=gene-VA249_RS15405;Dbxref=Genbank:WP_128812548.1;Name=WP_128812548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705073.1;locus_tag=VA249_RS15405;product=NUDIX hydrolase;protein_id=WP_128812548.1;transl_table=11 NZ_AP024166.1 RefSeq gene 160602 163928 . - . ID=gene-VA249_RS15410;Name=VA249_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15410;old_locus_tag=VYA_28690 NZ_AP024166.1 Protein Homology CDS 160602 163928 . - 0 ID=cds-WP_225927139.1;Parent=gene-VA249_RS15410;Dbxref=Genbank:WP_225927139.1;Name=WP_225927139.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196614.1;locus_tag=VA249_RS15410;product=mechanosensitive ion channel;protein_id=WP_225927139.1;transl_table=11 NZ_AP024166.1 RefSeq gene 164204 165328 . + . ID=gene-VA249_RS15415;Name=VA249_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15415;old_locus_tag=VYA_28700 NZ_AP024166.1 Protein Homology CDS 164204 165328 . + 0 ID=cds-WP_221071350.1;Parent=gene-VA249_RS15415;Dbxref=Genbank:WP_221071350.1;Name=WP_221071350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535028.1;locus_tag=VA249_RS15415;product=carboxypeptidase family protein;protein_id=WP_221071350.1;transl_table=11 NZ_AP024166.1 RefSeq gene 165871 166842 . + . ID=gene-VA249_RS15420;Name=VA249_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15420;old_locus_tag=VYA_28710 NZ_AP024166.1 Protein Homology CDS 165871 166842 . + 0 ID=cds-WP_221071352.1;Parent=gene-VA249_RS15420;Dbxref=Genbank:WP_221071352.1;Name=WP_221071352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005445398.1;locus_tag=VA249_RS15420;product=outer membrane beta-barrel protein;protein_id=WP_221071352.1;transl_table=11 NZ_AP024166.1 RefSeq gene 167062 167835 . + . ID=gene-VA249_RS15425;Name=VA249_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15425;old_locus_tag=VYA_28720 NZ_AP024166.1 Protein Homology CDS 167062 167835 . + 0 ID=cds-WP_221071354.1;Parent=gene-VA249_RS15425;Dbxref=Genbank:WP_221071354.1;Name=WP_221071354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008987224.1;locus_tag=VA249_RS15425;product=phosphotransferase;protein_id=WP_221071354.1;transl_table=11 NZ_AP024166.1 RefSeq gene 168097 169338 . + . ID=gene-VA249_RS15430;Name=VA249_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15430;old_locus_tag=VYA_28730 NZ_AP024166.1 Protein Homology CDS 168097 169338 . + 0 ID=cds-WP_225927153.1;Parent=gene-VA249_RS15430;Dbxref=Genbank:WP_225927153.1;Name=WP_225927153.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645341.1;locus_tag=VA249_RS15430;product=Nramp family divalent metal transporter;protein_id=WP_225927153.1;transl_table=11 NZ_AP024166.1 RefSeq gene 169438 170922 . - . ID=gene-VA249_RS15435;Name=VA249_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15435;old_locus_tag=VYA_28740 NZ_AP024166.1 Protein Homology CDS 169438 170922 . - 0 ID=cds-WP_221071359.1;Parent=gene-VA249_RS15435;Dbxref=Genbank:WP_221071359.1;Name=WP_221071359.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696908.1;locus_tag=VA249_RS15435;product=MFS transporter;protein_id=WP_221071359.1;transl_table=11 NZ_AP024166.1 RefSeq gene 171403 172773 . - . ID=gene-VA249_RS15440;Name=VA249_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15440;old_locus_tag=VYA_28750 NZ_AP024166.1 Protein Homology CDS 171403 172773 . - 0 ID=cds-WP_221071361.1;Parent=gene-VA249_RS15440;Dbxref=Genbank:WP_221071361.1;Name=WP_221071361.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275150.1;locus_tag=VA249_RS15440;product=L-serine ammonia-lyase;protein_id=WP_221071361.1;transl_table=11 NZ_AP024166.1 RefSeq gene 172963 173805 . + . ID=gene-VA249_RS15445;Name=VA249_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15445;old_locus_tag=VYA_28760 NZ_AP024166.1 Protein Homology CDS 172963 173805 . + 0 ID=cds-WP_221071369.1;Parent=gene-VA249_RS15445;Dbxref=Genbank:WP_221071369.1;Name=WP_221071369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999198.1;locus_tag=VA249_RS15445;product=YdcF family protein;protein_id=WP_221071369.1;transl_table=11 NZ_AP024166.1 RefSeq gene 173871 174530 . - . ID=gene-VA249_RS15450;Name=VA249_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15450;old_locus_tag=VYA_28770 NZ_AP024166.1 Protein Homology CDS 173871 174530 . - 0 ID=cds-WP_221071370.1;Parent=gene-VA249_RS15450;Dbxref=Genbank:WP_221071370.1;Name=WP_221071370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432450.1;locus_tag=VA249_RS15450;product=hypothetical protein;protein_id=WP_221071370.1;transl_table=11 NZ_AP024166.1 RefSeq gene 174781 175041 . - . ID=gene-VA249_RS15455;Name=VA249_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15455;old_locus_tag=VYA_28780 NZ_AP024166.1 Protein Homology CDS 174781 175041 . - 0 ID=cds-WP_128812556.1;Parent=gene-VA249_RS15455;Dbxref=Genbank:WP_128812556.1;Name=WP_128812556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443680.1;locus_tag=VA249_RS15455;product=DUF333 domain-containing protein;protein_id=WP_128812556.1;transl_table=11 NZ_AP024166.1 RefSeq gene 175299 175817 . + . ID=gene-VA249_RS15460;Name=VA249_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15460;old_locus_tag=VYA_28790 NZ_AP024166.1 Protein Homology CDS 175299 175817 . + 0 ID=cds-WP_221071371.1;Parent=gene-VA249_RS15460;Dbxref=Genbank:WP_221071371.1;Name=WP_221071371.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005476644.1;locus_tag=VA249_RS15460;product=NUDIX domain-containing protein;protein_id=WP_221071371.1;transl_table=11 NZ_AP024166.1 RefSeq gene 176186 176962 . - . ID=gene-VA249_RS15465;Name=VA249_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15465;old_locus_tag=VYA_28800 NZ_AP024166.1 Protein Homology CDS 176186 176962 . - 0 ID=cds-WP_221071372.1;Parent=gene-VA249_RS15465;Dbxref=Genbank:WP_221071372.1;Name=WP_221071372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450811.1;locus_tag=VA249_RS15465;product=lytic transglycosylase domain-containing protein;protein_id=WP_221071372.1;transl_table=11 NZ_AP024166.1 RefSeq gene 176943 177380 . - . ID=gene-VA249_RS15470;Name=VA249_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15470;old_locus_tag=VYA_28810 NZ_AP024166.1 Protein Homology CDS 176943 177380 . - 0 ID=cds-WP_221071373.1;Parent=gene-VA249_RS15470;Dbxref=Genbank:WP_221071373.1;Name=WP_221071373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705036.1;locus_tag=VA249_RS15470;product=flagellar export chaperone FlgN;protein_id=WP_221071373.1;transl_table=11 NZ_AP024166.1 RefSeq gene 177402 177683 . - . ID=gene-VA249_RS15475;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=VA249_RS15475;old_locus_tag=VYA_28820 NZ_AP024166.1 Protein Homology CDS 177402 177683 . - 0 ID=cds-WP_221071374.1;Parent=gene-VA249_RS15475;Dbxref=Genbank:WP_221071374.1;Name=WP_221071374.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696912.1;locus_tag=VA249_RS15475;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_221071374.1;transl_table=11 NZ_AP024166.1 RefSeq gene 177819 178616 . - . ID=gene-VA249_RS15480;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=VA249_RS15480;old_locus_tag=VYA_28830 NZ_AP024166.1 Protein Homology CDS 177819 178616 . - 0 ID=cds-WP_221071375.1;Parent=gene-VA249_RS15480;Dbxref=Genbank:WP_221071375.1;Name=WP_221071375.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384406.1;locus_tag=VA249_RS15480;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_221071375.1;transl_table=11 NZ_AP024166.1 RefSeq gene 178693 179055 . + . ID=gene-VA249_RS15485;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=VA249_RS15485;old_locus_tag=VYA_28840 NZ_AP024166.1 Protein Homology CDS 178693 179055 . + 0 ID=cds-WP_128812561.1;Parent=gene-VA249_RS15485;Dbxref=Genbank:WP_128812561.1;Name=WP_128812561.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432433.1;locus_tag=VA249_RS15485;product=flagellar basal body rod protein FlgB;protein_id=WP_128812561.1;transl_table=11 NZ_AP024166.1 RefSeq gene 179058 179492 . + . ID=gene-VA249_RS15490;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=VA249_RS15490;old_locus_tag=VYA_28850 NZ_AP024166.1 Protein Homology CDS 179058 179492 . + 0 ID=cds-WP_128812562.1;Parent=gene-VA249_RS15490;Dbxref=Genbank:WP_128812562.1;Name=WP_128812562.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006963060.1;locus_tag=VA249_RS15490;product=flagellar basal body rod protein FlgC;protein_id=WP_128812562.1;transl_table=11 NZ_AP024166.1 RefSeq gene 179492 180175 . + . ID=gene-VA249_RS15495;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=VA249_RS15495;old_locus_tag=VYA_28860 NZ_AP024166.1 Protein Homology CDS 179492 180175 . + 0 ID=cds-WP_221071376.1;Parent=gene-VA249_RS15495;Dbxref=Genbank:WP_221071376.1;Name=WP_221071376.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535962.1;locus_tag=VA249_RS15495;product=flagellar hook assembly protein FlgD;protein_id=WP_221071376.1;transl_table=11 NZ_AP024166.1 RefSeq gene 180201 181400 . + . ID=gene-VA249_RS15500;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=VA249_RS15500;old_locus_tag=VYA_28870 NZ_AP024166.1 Protein Homology CDS 180201 181400 . + 0 ID=cds-WP_221071377.1;Parent=gene-VA249_RS15500;Dbxref=Genbank:WP_221071377.1;Name=WP_221071377.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645331.1;locus_tag=VA249_RS15500;product=flagellar basal body protein FlgE;protein_id=WP_221071377.1;transl_table=11 NZ_AP024166.1 RefSeq gene 181413 182144 . + . ID=gene-VA249_RS15505;Name=VA249_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15505;old_locus_tag=VYA_28880 NZ_AP024166.1 Protein Homology CDS 181413 182144 . + 0 ID=cds-WP_211917977.1;Parent=gene-VA249_RS15505;Dbxref=Genbank:WP_211917977.1;Name=WP_211917977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188581.1;locus_tag=VA249_RS15505;product=flagellar basal body rod protein FlgF;protein_id=WP_211917977.1;transl_table=11 NZ_AP024166.1 RefSeq gene 182184 182969 . + . ID=gene-VA249_RS15510;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=VA249_RS15510;old_locus_tag=VYA_28890 NZ_AP024166.1 Protein Homology CDS 182184 182969 . + 0 ID=cds-WP_221071378.1;Parent=gene-VA249_RS15510;Dbxref=Genbank:WP_221071378.1;Name=WP_221071378.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005314259.1;locus_tag=VA249_RS15510;product=flagellar basal-body rod protein FlgG;protein_id=WP_221071378.1;transl_table=11 NZ_AP024166.1 RefSeq gene 182983 183672 . + . ID=gene-VA249_RS15515;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=VA249_RS15515;old_locus_tag=VYA_28900 NZ_AP024166.1 Protein Homology CDS 182983 183672 . + 0 ID=cds-WP_221071379.1;Parent=gene-VA249_RS15515;Dbxref=Genbank:WP_221071379.1;Name=WP_221071379.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432420.1;locus_tag=VA249_RS15515;product=flagellar basal body L-ring protein FlgH;protein_id=WP_221071379.1;transl_table=11 NZ_AP024166.1 RefSeq gene 183672 184793 . + . ID=gene-VA249_RS15520;Name=VA249_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15520;old_locus_tag=VYA_28910 NZ_AP024166.1 Protein Homology CDS 183672 184793 . + 0 ID=cds-WP_221071381.1;Parent=gene-VA249_RS15520;Dbxref=Genbank:WP_221071381.1;Name=WP_221071381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705032.1;locus_tag=VA249_RS15520;product=flagellar basal body P-ring protein FlgI;protein_id=WP_221071381.1;transl_table=11 NZ_AP024166.1 RefSeq gene 184804 185352 . + . ID=gene-VA249_RS15525;Name=VA249_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15525;old_locus_tag=VYA_28920 NZ_AP024166.1 Protein Homology CDS 184804 185352 . + 0 ID=cds-WP_221071382.1;Parent=gene-VA249_RS15525;Dbxref=Genbank:WP_221071382.1;Name=WP_221071382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999207.1;locus_tag=VA249_RS15525;product=rod-binding protein;protein_id=WP_221071382.1;transl_table=11 NZ_AP024166.1 RefSeq gene 185353 186726 . + . ID=gene-VA249_RS15530;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=VA249_RS15530;old_locus_tag=VYA_28930 NZ_AP024166.1 Protein Homology CDS 185353 186726 . + 0 ID=cds-WP_221071383.1;Parent=gene-VA249_RS15530;Dbxref=Genbank:WP_221071383.1;Name=WP_221071383.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705030.1;locus_tag=VA249_RS15530;product=flagellar hook-associated protein FlgK;protein_id=WP_221071383.1;transl_table=11 NZ_AP024166.1 RefSeq gene 186739 187638 . + . ID=gene-VA249_RS15535;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=VA249_RS15535;old_locus_tag=VYA_28940 NZ_AP024166.1 Protein Homology CDS 186739 187638 . + 0 ID=cds-WP_128812570.1;Parent=gene-VA249_RS15535;Dbxref=Genbank:WP_128812570.1;Name=WP_128812570.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435920.1;locus_tag=VA249_RS15535;product=flagellar hook-associated protein FlgL;protein_id=WP_128812570.1;transl_table=11 NZ_AP024166.1 RefSeq gene 187651 188694 . + . ID=gene-VA249_RS15540;Name=VA249_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15540;old_locus_tag=VYA_28950 NZ_AP024166.1 Protein Homology CDS 187651 188694 . + 0 ID=cds-WP_221071384.1;Parent=gene-VA249_RS15540;Dbxref=Genbank:WP_221071384.1;Name=WP_221071384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432409.1;locus_tag=VA249_RS15540;product=flagellin;protein_id=WP_221071384.1;transl_table=11 NZ_AP024166.1 RefSeq gene 188772 189500 . + . ID=gene-VA249_RS15545;Name=VA249_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15545;old_locus_tag=VYA_28960 NZ_AP024166.1 Protein Homology CDS 188772 189500 . + 0 ID=cds-WP_221071385.1;Parent=gene-VA249_RS15545;Dbxref=Genbank:WP_221071385.1;Name=WP_221071385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064388.1;locus_tag=VA249_RS15545;product=acylneuraminate cytidylyltransferase family protein;protein_id=WP_221071385.1;transl_table=11 NZ_AP024166.1 RefSeq gene 189497 190537 . + . ID=gene-VA249_RS15550;Name=VA249_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15550;old_locus_tag=VYA_28970 NZ_AP024166.1 Protein Homology CDS 189497 190537 . + 0 ID=cds-WP_221071386.1;Parent=gene-VA249_RS15550;Dbxref=Genbank:WP_221071386.1;Name=WP_221071386.1;Ontology_term=GO:0016051;gbkey=CDS;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632605.1;locus_tag=VA249_RS15550;product=N-acetylneuraminate synthase family protein;protein_id=WP_221071386.1;transl_table=11 NZ_AP024166.1 RefSeq gene 190542 191666 . + . ID=gene-VA249_RS15555;Name=neuC;gbkey=Gene;gene=neuC;gene_biotype=protein_coding;locus_tag=VA249_RS15555;old_locus_tag=VYA_28980 NZ_AP024166.1 Protein Homology CDS 190542 191666 . + 0 ID=cds-WP_221071387.1;Parent=gene-VA249_RS15555;Dbxref=Genbank:WP_221071387.1;Name=WP_221071387.1;Ontology_term=GO:0006047,GO:0008761;gbkey=CDS;gene=neuC;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=UDP-N-acetylglucosamine metabolic process|0006047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001971578.1;locus_tag=VA249_RS15555;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_221071387.1;transl_table=11 NZ_AP024166.1 RefSeq gene 191621 192769 . + . ID=gene-VA249_RS15560;Name=VA249_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15560;old_locus_tag=VYA_28990 NZ_AP024166.1 Protein Homology CDS 191621 192769 . + 0 ID=cds-WP_221071388.1;Parent=gene-VA249_RS15560;Dbxref=Genbank:WP_221071388.1;Name=WP_221071388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016145.2;locus_tag=VA249_RS15560;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_221071388.1;transl_table=11 NZ_AP024166.1 RefSeq gene 192872 195598 . - . ID=gene-VA249_RS15565;Name=VA249_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15565;old_locus_tag=VYA_29000 NZ_AP024166.1 Protein Homology CDS 192872 195598 . - 0 ID=cds-WP_221071389.1;Parent=gene-VA249_RS15565;Dbxref=Genbank:WP_221071389.1;Name=WP_221071389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999211.1;locus_tag=VA249_RS15565;product=DUF2339 domain-containing protein;protein_id=WP_221071389.1;transl_table=11 NZ_AP024166.1 RefSeq gene 195812 197605 . + . ID=gene-VA249_RS15570;Name=VA249_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15570;old_locus_tag=VYA_29010 NZ_AP024166.1 Protein Homology CDS 195812 197605 . + 0 ID=cds-WP_221071396.1;Parent=gene-VA249_RS15570;Dbxref=Genbank:WP_221071396.1;Name=WP_221071396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009388148.1;locus_tag=VA249_RS15570;product=sodium:proton antiporter;protein_id=WP_221071396.1;transl_table=11 NZ_AP024166.1 RefSeq gene 197891 198910 . + . ID=gene-VA249_RS15575;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=VA249_RS15575;old_locus_tag=VYA_29020 NZ_AP024166.1 Protein Homology CDS 197891 198910 . + 0 ID=cds-WP_221071399.1;Parent=gene-VA249_RS15575;Dbxref=Genbank:WP_221071399.1;Name=WP_221071399.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999214.1;locus_tag=VA249_RS15575;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_221071399.1;transl_table=11 NZ_AP024166.1 RefSeq gene 198925 199812 . - . ID=gene-VA249_RS15580;Name=VA249_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15580;old_locus_tag=VYA_29030 NZ_AP024166.1 Protein Homology CDS 198925 199812 . - 0 ID=cds-WP_221071401.1;Parent=gene-VA249_RS15580;Dbxref=Genbank:WP_221071401.1;Name=WP_221071401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705025.1;locus_tag=VA249_RS15580;product=LysR family transcriptional regulator;protein_id=WP_221071401.1;transl_table=11 NZ_AP024166.1 RefSeq gene 199950 200387 . + . ID=gene-VA249_RS15585;Name=VA249_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15585;old_locus_tag=VYA_29040 NZ_AP024166.1 Protein Homology CDS 199950 200387 . + 0 ID=cds-WP_221071403.1;Parent=gene-VA249_RS15585;Dbxref=Genbank:WP_221071403.1;Name=WP_221071403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195742.1;locus_tag=VA249_RS15585;product=PACE efflux transporter;protein_id=WP_221071403.1;transl_table=11 NZ_AP024166.1 RefSeq gene 200506 200769 . + . ID=gene-VA249_RS15590;Name=VA249_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15590;old_locus_tag=VYA_29050 NZ_AP024166.1 Protein Homology CDS 200506 200769 . + 0 ID=cds-WP_128812574.1;Parent=gene-VA249_RS15590;Dbxref=Genbank:WP_128812574.1;Name=WP_128812574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435930.1;locus_tag=VA249_RS15590;product=DUF3012 domain-containing protein;protein_id=WP_128812574.1;transl_table=11 NZ_AP024166.1 RefSeq gene 200919 201341 . + . ID=gene-VA249_RS15595;Name=VA249_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15595;old_locus_tag=VYA_29060 NZ_AP024166.1 Protein Homology CDS 200919 201341 . + 0 ID=cds-WP_221071406.1;Parent=gene-VA249_RS15595;Dbxref=Genbank:WP_221071406.1;Name=WP_221071406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705015.1;locus_tag=VA249_RS15595;product=hypothetical protein;protein_id=WP_221071406.1;transl_table=11 NZ_AP024166.1 RefSeq gene 201560 202030 . + . ID=gene-VA249_RS15600;Name=VA249_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15600;old_locus_tag=VYA_29070 NZ_AP024166.1 Protein Homology CDS 201560 202030 . + 0 ID=cds-WP_221071407.1;Parent=gene-VA249_RS15600;Dbxref=Genbank:WP_221071407.1;Name=WP_221071407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705015.1;locus_tag=VA249_RS15600;product=hypothetical protein;protein_id=WP_221071407.1;transl_table=11 NZ_AP024166.1 RefSeq gene 202137 202424 . - . ID=gene-VA249_RS24120;Name=VA249_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24120 NZ_AP024166.1 Protein Homology CDS 202137 202424 . - 0 ID=cds-WP_128812576.1;Parent=gene-VA249_RS24120;Dbxref=Genbank:WP_128812576.1;Name=WP_128812576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435947.1;locus_tag=VA249_RS24120;product=hypothetical protein;protein_id=WP_128812576.1;transl_table=11 NZ_AP024166.1 RefSeq gene 202511 203503 . - . ID=gene-VA249_RS15605;Name=VA249_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15605;old_locus_tag=VYA_29080 NZ_AP024166.1 Protein Homology CDS 202511 203503 . - 0 ID=cds-WP_128812577.1;Parent=gene-VA249_RS15605;Dbxref=Genbank:WP_128812577.1;Name=WP_128812577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448665.1;locus_tag=VA249_RS15605;product=OmpA family protein;protein_id=WP_128812577.1;transl_table=11 NZ_AP024166.1 RefSeq gene 203503 204360 . - . ID=gene-VA249_RS15610;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=VA249_RS15610;old_locus_tag=VYA_29090 NZ_AP024166.1 Protein Homology CDS 203503 204360 . - 0 ID=cds-WP_128812578.1;Parent=gene-VA249_RS15610;Dbxref=Genbank:WP_128812578.1;Name=WP_128812578.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645315.1;locus_tag=VA249_RS15610;product=flagellar motor stator protein MotA;protein_id=WP_128812578.1;transl_table=11 NZ_AP024166.1 RefSeq gene 204371 205099 . - . ID=gene-VA249_RS15615;Name=VA249_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15615;old_locus_tag=VYA_29100 NZ_AP024166.1 Protein Homology CDS 204371 205099 . - 0 ID=cds-WP_221071409.1;Parent=gene-VA249_RS15615;Dbxref=Genbank:WP_221071409.1;Name=WP_221071409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005462772.1;locus_tag=VA249_RS15615;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_221071409.1;transl_table=11 NZ_AP024166.1 RefSeq gene 205112 205615 . - . ID=gene-VA249_RS15620;Name=VA249_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15620;old_locus_tag=VYA_29110 NZ_AP024166.1 Protein Homology CDS 205112 205615 . - 0 ID=cds-WP_221071411.1;Parent=gene-VA249_RS15620;Dbxref=Genbank:WP_221071411.1;Name=WP_221071411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999240.1;locus_tag=VA249_RS15620;product=flagellar basal body-associated FliL family protein;protein_id=WP_221071411.1;transl_table=11 NZ_AP024166.1 RefSeq gene 205638 206678 . - . ID=gene-VA249_RS24125;Name=VA249_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24125;old_locus_tag=VYA_29120 NZ_AP024166.1 Protein Homology CDS 205638 206678 . - 0 ID=cds-WP_225927140.1;Parent=gene-VA249_RS24125;Dbxref=Genbank:WP_225927140.1;Name=WP_225927140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432356.1;locus_tag=VA249_RS24125;product=flagellar hook-length control protein FliK;protein_id=WP_225927140.1;transl_table=11 NZ_AP024166.1 RefSeq gene 206697 207011 . - . ID=gene-VA249_RS15630;Name=VA249_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15630;old_locus_tag=VYA_29130 NZ_AP024166.1 GeneMarkS-2+ CDS 206697 207011 . - 0 ID=cds-WP_221071413.1;Parent=gene-VA249_RS15630;Dbxref=Genbank:WP_221071413.1;Name=WP_221071413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS15630;product=hypothetical protein;protein_id=WP_221071413.1;transl_table=11 NZ_AP024166.1 RefSeq gene 206995 207381 . - . ID=gene-VA249_RS15635;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=VA249_RS15635;old_locus_tag=VYA_29140 NZ_AP024166.1 Protein Homology CDS 206995 207381 . - 0 ID=cds-WP_128812583.1;Parent=gene-VA249_RS15635;Dbxref=Genbank:WP_128812583.1;Name=WP_128812583.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999242.1;locus_tag=VA249_RS15635;product=flagellar export chaperone FliS;protein_id=WP_128812583.1;transl_table=11 NZ_AP024166.1 RefSeq gene 207395 208747 . - . ID=gene-VA249_RS15640;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=VA249_RS15640;old_locus_tag=VYA_29150 NZ_AP024166.1 Protein Homology CDS 207395 208747 . - 0 ID=cds-WP_221071415.1;Parent=gene-VA249_RS15640;Dbxref=Genbank:WP_221071415.1;Name=WP_221071415.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195757.1;locus_tag=VA249_RS15640;product=flagellar filament capping protein FliD;protein_id=WP_221071415.1;transl_table=11 NZ_AP024166.1 RefSeq gene 209033 209287 . - . ID=gene-VA249_RS15645;Name=VA249_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15645;old_locus_tag=VYA_29160 NZ_AP024166.1 GeneMarkS-2+ CDS 209033 209287 . - 0 ID=cds-WP_221071417.1;Parent=gene-VA249_RS15645;Dbxref=Genbank:WP_221071417.1;Name=WP_221071417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS15645;product=hypothetical protein;protein_id=WP_221071417.1;transl_table=11 NZ_AP024166.1 RefSeq gene 209277 210602 . - . ID=gene-VA249_RS15650;Name=VA249_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15650;old_locus_tag=VYA_29170 NZ_AP024166.1 Protein Homology CDS 209277 210602 . - 0 ID=cds-WP_225927141.1;Parent=gene-VA249_RS15650;Dbxref=Genbank:WP_225927141.1;Name=WP_225927141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005398053.1;locus_tag=VA249_RS15650;product=DUF115 domain-containing protein;protein_id=WP_225927141.1;transl_table=11 NZ_AP024166.1 RefSeq gene 210662 211528 . - . ID=gene-VA249_RS15655;Name=lafA;gbkey=Gene;gene=lafA;gene_biotype=protein_coding;locus_tag=VA249_RS15655;old_locus_tag=VYA_29180 NZ_AP024166.1 Protein Homology CDS 210662 211528 . - 0 ID=cds-WP_221071419.1;Parent=gene-VA249_RS15655;Dbxref=Genbank:WP_221071419.1;Name=WP_221071419.1;gbkey=CDS;gene=lafA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008223380.1;locus_tag=VA249_RS15655;product=lateral flagellin LafA;protein_id=WP_221071419.1;transl_table=11 NZ_AP024166.1 RefSeq gene 211791 212588 . - . ID=gene-VA249_RS15660;Name=VA249_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15660;old_locus_tag=VYA_29190 NZ_AP024166.1 Protein Homology CDS 211791 212588 . - 0 ID=cds-WP_225927142.1;Parent=gene-VA249_RS15660;Dbxref=Genbank:WP_225927142.1;Name=WP_225927142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188599.1;locus_tag=VA249_RS15660;product=diguanylate phosphodiesterase;protein_id=WP_225927142.1;transl_table=11 NZ_AP024166.1 RefSeq gene 212581 214671 . - . ID=gene-VA249_RS15665;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=VA249_RS15665;old_locus_tag=VYA_29200 NZ_AP024166.1 Protein Homology CDS 212581 214671 . - 0 ID=cds-WP_221071421.1;Parent=gene-VA249_RS15665;Dbxref=Genbank:WP_221071421.1;Name=WP_221071421.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016959248.1;locus_tag=VA249_RS15665;product=flagellar biosynthesis protein FlhA;protein_id=WP_221071421.1;transl_table=11 NZ_AP024166.1 RefSeq gene 214703 215830 . - . ID=gene-VA249_RS15670;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=VA249_RS15670;old_locus_tag=VYA_29210 NZ_AP024166.1 Protein Homology CDS 214703 215830 . - 0 ID=cds-WP_221071423.1;Parent=gene-VA249_RS15670;Dbxref=Genbank:WP_221071423.1;Name=WP_221071423.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741983.1;locus_tag=VA249_RS15670;product=flagellar biosynthesis protein FlhB;protein_id=WP_221071423.1;transl_table=11 NZ_AP024166.1 RefSeq gene 215827 216603 . - . ID=gene-VA249_RS15675;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=VA249_RS15675;old_locus_tag=VYA_29220 NZ_AP024166.1 Protein Homology CDS 215827 216603 . - 0 ID=cds-WP_211917941.1;Parent=gene-VA249_RS15675;Dbxref=Genbank:WP_211917941.1;Name=WP_211917941.1;Ontology_term=GO:0006605,GO:0044780,GO:0016021;gbkey=CDS;gene=fliR;go_component=integral component of membrane|0016021||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999252.1;locus_tag=VA249_RS15675;product=flagellar biosynthetic protein FliR;protein_id=WP_211917941.1;transl_table=11 NZ_AP024166.1 RefSeq gene 216603 216872 . - . ID=gene-VA249_RS15680;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=VA249_RS15680;old_locus_tag=VYA_29230 NZ_AP024166.1 Protein Homology CDS 216603 216872 . - 0 ID=cds-WP_128812590.1;Parent=gene-VA249_RS15680;Dbxref=Genbank:WP_128812590.1;Name=WP_128812590.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450901.1;locus_tag=VA249_RS15680;product=flagellar biosynthesis protein FliQ;protein_id=WP_128812590.1;transl_table=11 NZ_AP024166.1 RefSeq gene 216885 217610 . - . ID=gene-VA249_RS15685;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=VA249_RS15685;old_locus_tag=VYA_29240 NZ_AP024166.1 Protein Homology CDS 216885 217610 . - 0 ID=cds-WP_164837325.1;Parent=gene-VA249_RS15685;Dbxref=Genbank:WP_164837325.1;Name=WP_164837325.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006879366.1;locus_tag=VA249_RS15685;product=flagellar type III secretion system pore protein FliP;protein_id=WP_164837325.1;transl_table=11 NZ_AP024166.1 RefSeq gene 217677 218045 . - . ID=gene-VA249_RS15690;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=VA249_RS15690;old_locus_tag=VYA_29250 NZ_AP024166.1 Protein Homology CDS 217677 218045 . - 0 ID=cds-WP_128812592.1;Parent=gene-VA249_RS15690;Dbxref=Genbank:WP_128812592.1;Name=WP_128812592.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532238.1;locus_tag=VA249_RS15690;product=flagellar motor switch protein FliN;protein_id=WP_128812592.1;transl_table=11 NZ_AP024166.1 RefSeq gene 218042 218860 . - . ID=gene-VA249_RS15695;Name=VA249_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15695;old_locus_tag=VYA_29260 NZ_AP024166.1 Protein Homology CDS 218042 218860 . - 0 ID=cds-WP_128812593.1;Parent=gene-VA249_RS15695;Dbxref=Genbank:WP_128812593.1;Name=WP_128812593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435978.1;locus_tag=VA249_RS15695;product=flagellar motor switch protein FliM;protein_id=WP_128812593.1;transl_table=11 NZ_AP024166.1 RefSeq gene 219233 220255 . + . ID=gene-VA249_RS15700;Name=VA249_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15700;old_locus_tag=VYA_29270 NZ_AP024166.1 Protein Homology CDS 219233 220255 . + 0 ID=cds-WP_221071425.1;Parent=gene-VA249_RS15700;Dbxref=Genbank:WP_221071425.1;Name=WP_221071425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188601.1;locus_tag=VA249_RS15700;product=OmpA family protein;protein_id=WP_221071425.1;transl_table=11 NZ_AP024166.1 RefSeq gene 220255 221586 . + . ID=gene-VA249_RS15705;Name=VA249_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15705;old_locus_tag=VYA_29280 NZ_AP024166.1 Protein Homology CDS 220255 221586 . + 0 ID=cds-WP_221072186.1;Parent=gene-VA249_RS15705;Dbxref=Genbank:WP_221072186.1;Name=WP_221072186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020432069.1;locus_tag=VA249_RS15705;product=sigma-54 dependent transcriptional regulator;protein_id=WP_221072186.1;transl_table=11 NZ_AP024166.1 RefSeq gene 221600 221956 . + . ID=gene-VA249_RS15710;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=VA249_RS15710;old_locus_tag=VYA_29290 NZ_AP024166.1 Protein Homology CDS 221600 221956 . + 0 ID=cds-WP_221071427.1;Parent=gene-VA249_RS15710;Dbxref=Genbank:WP_221071427.1;Name=WP_221071427.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432332.1;locus_tag=VA249_RS15710;product=flagellar hook-basal body complex protein FliE;protein_id=WP_221071427.1;transl_table=11 NZ_AP024166.1 RefSeq gene 221960 223711 . + . ID=gene-VA249_RS15715;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=VA249_RS15715;old_locus_tag=VYA_29300 NZ_AP024166.1 Protein Homology CDS 221960 223711 . + 0 ID=cds-WP_221071429.1;Parent=gene-VA249_RS15715;Dbxref=Genbank:WP_221071429.1;Name=WP_221071429.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435986.1;locus_tag=VA249_RS15715;product=flagellar M-ring protein FliF;protein_id=WP_221071429.1;transl_table=11 NZ_AP024166.1 RefSeq gene 223674 224693 . + . ID=gene-VA249_RS15720;Name=VA249_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15720;old_locus_tag=VYA_29310 NZ_AP024166.1 Protein Homology CDS 223674 224693 . + 0 ID=cds-WP_221071431.1;Parent=gene-VA249_RS15720;Dbxref=Genbank:WP_221071431.1;Name=WP_221071431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478340.1;locus_tag=VA249_RS15720;product=flagellar motor switch protein FliG;protein_id=WP_221071431.1;transl_table=11 NZ_AP024166.1 RefSeq gene 224697 225452 . + . ID=gene-VA249_RS15725;Name=VA249_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15725;old_locus_tag=VYA_29320 NZ_AP024166.1 Protein Homology CDS 224697 225452 . + 0 ID=cds-WP_221071433.1;Parent=gene-VA249_RS15725;Dbxref=Genbank:WP_221071433.1;Name=WP_221071433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275542.1;locus_tag=VA249_RS15725;product=flagellar assembly protein H;protein_id=WP_221071433.1;transl_table=11 NZ_AP024166.1 RefSeq gene 225445 226791 . + . ID=gene-VA249_RS15730;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=VA249_RS15730;old_locus_tag=VYA_29330 NZ_AP024166.1 Protein Homology CDS 225445 226791 . + 0 ID=cds-WP_221071435.1;Parent=gene-VA249_RS15730;Dbxref=Genbank:WP_221071435.1;Name=WP_221071435.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005384018.1;locus_tag=VA249_RS15730;product=flagellar protein export ATPase FliI;protein_id=WP_221071435.1;transl_table=11 NZ_AP024166.1 RefSeq gene 226860 227300 . + . ID=gene-VA249_RS15735;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=VA249_RS15735;old_locus_tag=VYA_29340 NZ_AP024166.1 Protein Homology CDS 226860 227300 . + 0 ID=cds-WP_221071437.1;Parent=gene-VA249_RS15735;Dbxref=Genbank:WP_221071437.1;Name=WP_221071437.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432325.1;locus_tag=VA249_RS15735;product=flagellar export protein FliJ;protein_id=WP_221071437.1;transl_table=11 NZ_AP024166.1 RefSeq gene 227372 228448 . - . ID=gene-VA249_RS15740;Name=VA249_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15740;old_locus_tag=VYA_29350 NZ_AP024166.1 Protein Homology CDS 227372 228448 . - 0 ID=cds-WP_221071439.1;Parent=gene-VA249_RS15740;Dbxref=Genbank:WP_221071439.1;Name=WP_221071439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436001.1;locus_tag=VA249_RS15740;product=serine protease;protein_id=WP_221071439.1;transl_table=11 NZ_AP024166.1 RefSeq gene 228738 229490 . + . ID=gene-VA249_RS15745;Name=VA249_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15745;old_locus_tag=VYA_29360 NZ_AP024166.1 Protein Homology CDS 228738 229490 . + 0 ID=cds-WP_221071441.1;Parent=gene-VA249_RS15745;Dbxref=Genbank:WP_221071441.1;Name=WP_221071441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195772.1;locus_tag=VA249_RS15745;product=phosphatase;protein_id=WP_221071441.1;transl_table=11 NZ_AP024166.1 RefSeq gene 229647 230036 . + . ID=gene-VA249_RS15750;Name=VA249_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15750;old_locus_tag=VYA_29370 NZ_AP024166.1 Protein Homology CDS 229647 230036 . + 0 ID=cds-WP_211917921.1;Parent=gene-VA249_RS15750;Dbxref=Genbank:WP_211917921.1;Name=WP_211917921.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0020037,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009840836.1;locus_tag=VA249_RS15750;product=cytochrome b562;protein_id=WP_211917921.1;transl_table=11 NZ_AP024166.1 RefSeq gene 230103 230486 . - . ID=gene-VA249_RS15755;Name=VA249_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15755;old_locus_tag=VYA_29380 NZ_AP024166.1 Protein Homology CDS 230103 230486 . - 0 ID=cds-WP_221071443.1;Parent=gene-VA249_RS15755;Dbxref=Genbank:WP_221071443.1;Name=WP_221071443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006960699.1;locus_tag=VA249_RS15755;product=VOC family protein;protein_id=WP_221071443.1;transl_table=11 NZ_AP024166.1 RefSeq gene 230548 231468 . - . ID=gene-VA249_RS15760;Name=VA249_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15760;old_locus_tag=VYA_29390 NZ_AP024166.1 Protein Homology CDS 230548 231468 . - 0 ID=cds-WP_221071445.1;Parent=gene-VA249_RS15760;Dbxref=Genbank:WP_221071445.1;Name=WP_221071445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532218.1;locus_tag=VA249_RS15760;product=LysR substrate-binding domain-containing protein;protein_id=WP_221071445.1;transl_table=11 NZ_AP024166.1 RefSeq gene 231546 232028 . - . ID=gene-VA249_RS15765;Name=VA249_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15765;old_locus_tag=VYA_29400 NZ_AP024166.1 Protein Homology CDS 231546 232028 . - 0 ID=cds-WP_221071447.1;Parent=gene-VA249_RS15765;Dbxref=Genbank:WP_221071447.1;Name=WP_221071447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188610.1;locus_tag=VA249_RS15765;product=hypothetical protein;protein_id=WP_221071447.1;transl_table=11 NZ_AP024166.1 RefSeq gene 232277 232960 . + . ID=gene-VA249_RS15770;Name=VA249_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15770;old_locus_tag=VYA_29410 NZ_AP024166.1 Protein Homology CDS 232277 232960 . + 0 ID=cds-WP_221071449.1;Parent=gene-VA249_RS15770;Dbxref=Genbank:WP_221071449.1;Name=WP_221071449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017109520.1;locus_tag=VA249_RS15770;product=spondin domain-containing protein;protein_id=WP_221071449.1;transl_table=11 NZ_AP024166.1 RefSeq gene 232971 233669 . + . ID=gene-VA249_RS15775;Name=VA249_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15775;old_locus_tag=VYA_29420 NZ_AP024166.1 Protein Homology CDS 232971 233669 . + 0 ID=cds-WP_221071451.1;Parent=gene-VA249_RS15775;Dbxref=Genbank:WP_221071451.1;Name=WP_221071451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004731401.1;locus_tag=VA249_RS15775;product=spondin domain-containing protein;protein_id=WP_221071451.1;transl_table=11 NZ_AP024166.1 RefSeq gene 233755 234486 . + . ID=gene-VA249_RS15780;Name=VA249_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15780;old_locus_tag=VYA_29430 NZ_AP024166.1 Protein Homology CDS 233755 234486 . + 0 ID=cds-WP_221071459.1;Parent=gene-VA249_RS15780;Dbxref=Genbank:WP_221071459.1;Name=WP_221071459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635499.1;locus_tag=VA249_RS15780;product=response regulator transcription factor;protein_id=WP_221071459.1;transl_table=11 NZ_AP024166.1 RefSeq gene 234529 235902 . + . ID=gene-VA249_RS15785;Name=VA249_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15785;old_locus_tag=VYA_29440 NZ_AP024166.1 Protein Homology CDS 234529 235902 . + 0 ID=cds-WP_221071461.1;Parent=gene-VA249_RS15785;Dbxref=Genbank:WP_221071461.1;Name=WP_221071461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432281.1;locus_tag=VA249_RS15785;product=HAMP domain-containing histidine kinase;protein_id=WP_221071461.1;transl_table=11 NZ_AP024166.1 RefSeq gene 236289 237695 . + . ID=gene-VA249_RS15790;Name=VA249_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15790;old_locus_tag=VYA_29450 NZ_AP024166.1 Protein Homology CDS 236289 237695 . + 0 ID=cds-WP_221071463.1;Parent=gene-VA249_RS15790;Dbxref=Genbank:WP_221071463.1;Name=WP_221071463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817305.1;locus_tag=VA249_RS15790;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_221071463.1;transl_table=11 NZ_AP024166.1 RefSeq gene 237760 238692 . + . ID=gene-VA249_RS15795;Name=VA249_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15795;old_locus_tag=VYA_29460 NZ_AP024166.1 Protein Homology CDS 237760 238692 . + 0 ID=cds-WP_221071464.1;Parent=gene-VA249_RS15795;Dbxref=Genbank:WP_221071464.1;Name=WP_221071464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530119.1;locus_tag=VA249_RS15795;product=transporter substrate-binding domain-containing protein;protein_id=WP_221071464.1;transl_table=11 NZ_AP024166.1 RefSeq gene 238689 241016 . + . ID=gene-VA249_RS15800;Name=VA249_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15800;old_locus_tag=VYA_29470 NZ_AP024166.1 Protein Homology CDS 238689 241016 . + 0 ID=cds-WP_221071465.1;Parent=gene-VA249_RS15800;Dbxref=Genbank:WP_221071465.1;Name=WP_221071465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234948.1;locus_tag=VA249_RS15800;product=EAL domain-containing protein;protein_id=WP_221071465.1;transl_table=11 NZ_AP024166.1 RefSeq gene 241226 242419 . + . ID=gene-VA249_RS15805;Name=VA249_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15805;old_locus_tag=VYA_29480 NZ_AP024166.1 Protein Homology CDS 241226 242419 . + 0 ID=cds-WP_128812611.1;Parent=gene-VA249_RS15805;Dbxref=Genbank:WP_128812611.1;Name=WP_128812611.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008079762.1;locus_tag=VA249_RS15805;product=glycine C-acetyltransferase;protein_id=WP_128812611.1;transl_table=11 NZ_AP024166.1 RefSeq gene 242484 243515 . + . ID=gene-VA249_RS15810;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=VA249_RS15810;old_locus_tag=VYA_29490 NZ_AP024166.1 Protein Homology CDS 242484 243515 . + 0 ID=cds-WP_221071466.1;Parent=gene-VA249_RS15810;Dbxref=Genbank:WP_221071466.1;Name=WP_221071466.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020332488.1;locus_tag=VA249_RS15810;product=L-threonine 3-dehydrogenase;protein_id=WP_221071466.1;transl_table=11 NZ_AP024166.1 RefSeq gene 244306 244773 . - . ID=gene-VA249_RS15815;Name=VA249_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15815;old_locus_tag=VYA_29510 NZ_AP024166.1 Protein Homology CDS 244306 244773 . - 0 ID=cds-WP_221071467.1;Parent=gene-VA249_RS15815;Dbxref=Genbank:WP_221071467.1;Name=WP_221071467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013691.2;locus_tag=VA249_RS15815;product=GIY-YIG nuclease family protein;protein_id=WP_221071467.1;transl_table=11 NZ_AP024166.1 RefSeq gene 244773 245591 . - . ID=gene-VA249_RS15820;Name=VA249_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15820;old_locus_tag=VYA_29520 NZ_AP024166.1 GeneMarkS-2+ CDS 244773 245591 . - 0 ID=cds-WP_221071468.1;Parent=gene-VA249_RS15820;Dbxref=Genbank:WP_221071468.1;Name=WP_221071468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS15820;product=hypothetical protein;protein_id=WP_221071468.1;transl_table=11 NZ_AP024166.1 RefSeq gene 245584 246972 . - . ID=gene-VA249_RS15825;Name=VA249_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15825;old_locus_tag=VYA_29530 NZ_AP024166.1 Protein Homology CDS 245584 246972 . - 0 ID=cds-WP_225927143.1;Parent=gene-VA249_RS15825;Dbxref=Genbank:WP_225927143.1;Name=WP_225927143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004411951.1;locus_tag=VA249_RS15825;product=hypothetical protein;protein_id=WP_225927143.1;transl_table=11 NZ_AP024166.1 RefSeq gene 247110 248192 . - . ID=gene-VA249_RS15830;Name=VA249_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15830;old_locus_tag=VYA_29540 NZ_AP024166.1 Protein Homology CDS 247110 248192 . - 0 ID=cds-WP_221071469.1;Parent=gene-VA249_RS15830;Dbxref=Genbank:WP_221071469.1;Name=WP_221071469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004411952.1;locus_tag=VA249_RS15830;product=hypothetical protein;protein_id=WP_221071469.1;transl_table=11 NZ_AP024166.1 RefSeq gene 249623 250264 . - . ID=gene-VA249_RS15835;Name=VA249_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15835;old_locus_tag=VYA_29560 NZ_AP024166.1 Protein Homology CDS 249623 250264 . - 0 ID=cds-WP_221071470.1;Parent=gene-VA249_RS15835;Dbxref=Genbank:WP_221071470.1;Name=WP_221071470.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=VA249_RS15835;product=winged helix-turn-helix domain-containing protein;protein_id=WP_221071470.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 250695 250934 . + . ID=gene-VA249_RS15840;Name=VA249_RS15840;end_range=250934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS15840;old_locus_tag=VYA_29570;partial=true;pseudo=true NZ_AP024166.1 Protein Homology CDS 250695 250934 . + 0 ID=cds-VA249_RS15840;Parent=gene-VA249_RS15840;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=250934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001913678.1;locus_tag=VA249_RS15840;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024166.1 RefSeq gene 251093 251407 . - . ID=gene-VA249_RS15845;Name=VA249_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15845;old_locus_tag=VYA_29580 NZ_AP024166.1 Protein Homology CDS 251093 251407 . - 0 ID=cds-WP_128812645.1;Parent=gene-VA249_RS15845;Dbxref=Genbank:WP_128812645.1;Name=WP_128812645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463615.1;locus_tag=VA249_RS15845;product=DUF1840 domain-containing protein;protein_id=WP_128812645.1;transl_table=11 NZ_AP024166.1 RefSeq gene 251568 252683 . - . ID=gene-VA249_RS15850;Name=VA249_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15850;old_locus_tag=VYA_29590 NZ_AP024166.1 Protein Homology CDS 251568 252683 . - 0 ID=cds-WP_221071471.1;Parent=gene-VA249_RS15850;Dbxref=Genbank:WP_221071471.1;Name=WP_221071471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005499795.1;locus_tag=VA249_RS15850;product=mechanosensitive ion channel family protein;protein_id=WP_221071471.1;transl_table=11 NZ_AP024166.1 RefSeq gene 252934 253281 . + . ID=gene-VA249_RS15855;Name=VA249_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15855;old_locus_tag=VYA_29600 NZ_AP024166.1 Protein Homology CDS 252934 253281 . + 0 ID=cds-WP_128812647.1;Parent=gene-VA249_RS15855;Dbxref=Genbank:WP_128812647.1;Name=WP_128812647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432247.1;locus_tag=VA249_RS15855;product=XRE family transcriptional regulator;protein_id=WP_128812647.1;transl_table=11 NZ_AP024166.1 RefSeq gene 253428 254567 . - . ID=gene-VA249_RS15860;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=VA249_RS15860;old_locus_tag=VYA_29610 NZ_AP024166.1 Protein Homology CDS 253428 254567 . - 0 ID=cds-WP_221071472.1;Parent=gene-VA249_RS15860;Dbxref=Genbank:WP_221071472.1;Name=WP_221071472.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006710458.1;locus_tag=VA249_RS15860;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_221071472.1;transl_table=11 NZ_AP024166.1 RefSeq gene 254728 255627 . + . ID=gene-VA249_RS15865;Name=VA249_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15865;old_locus_tag=VYA_29620 NZ_AP024166.1 Protein Homology CDS 254728 255627 . + 0 ID=cds-WP_221071474.1;Parent=gene-VA249_RS15865;Dbxref=Genbank:WP_221071474.1;Name=WP_221071474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200838.1;locus_tag=VA249_RS15865;product=LysR substrate-binding domain-containing protein;protein_id=WP_221071474.1;transl_table=11 NZ_AP024166.1 RefSeq gene 255842 257875 . + . ID=gene-VA249_RS15870;Name=VA249_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15870;old_locus_tag=VYA_29630 NZ_AP024166.1 Protein Homology CDS 255842 257875 . + 0 ID=cds-WP_221071476.1;Parent=gene-VA249_RS15870;Dbxref=Genbank:WP_221071476.1;Name=WP_221071476.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394877.1;locus_tag=VA249_RS15870;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_221071476.1;transl_table=11 NZ_AP024166.1 RefSeq gene 258164 258661 . - . ID=gene-VA249_RS15875;Name=VA249_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15875;old_locus_tag=VYA_29640 NZ_AP024166.1 Protein Homology CDS 258164 258661 . - 0 ID=cds-WP_221072191.1;Parent=gene-VA249_RS15875;Dbxref=Genbank:WP_221072191.1;Name=WP_221072191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189599.1;locus_tag=VA249_RS15875;product=hypothetical protein;protein_id=WP_221072191.1;transl_table=11 NZ_AP024166.1 RefSeq gene 258858 261218 . + . ID=gene-VA249_RS15880;Name=VA249_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15880;old_locus_tag=VYA_29650 NZ_AP024166.1 Protein Homology CDS 258858 261218 . + 0 ID=cds-WP_221071478.1;Parent=gene-VA249_RS15880;Dbxref=Genbank:WP_221071478.1;Name=WP_221071478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020328880.1;locus_tag=VA249_RS15880;product=Lon protease family protein;protein_id=WP_221071478.1;transl_table=11 NZ_AP024166.1 RefSeq gene 261425 263053 . + . ID=gene-VA249_RS15885;Name=VA249_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15885;old_locus_tag=VYA_29660 NZ_AP024166.1 Protein Homology CDS 261425 263053 . + 0 ID=cds-WP_221071481.1;Parent=gene-VA249_RS15885;Dbxref=Genbank:WP_221071481.1;Name=WP_221071481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529974.1;locus_tag=VA249_RS15885;product=methyl-accepting chemotaxis protein;protein_id=WP_221071481.1;transl_table=11 NZ_AP024166.1 RefSeq gene 263249 263995 . - . ID=gene-VA249_RS15890;Name=VA249_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15890;old_locus_tag=VYA_29670 NZ_AP024166.1 Protein Homology CDS 263249 263995 . - 0 ID=cds-WP_221071483.1;Parent=gene-VA249_RS15890;Dbxref=Genbank:WP_221071483.1;Name=WP_221071483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189597.1;locus_tag=VA249_RS15890;product=PilZ domain-containing protein;protein_id=WP_221071483.1;transl_table=11 NZ_AP024166.1 RefSeq gene 264289 264789 . - . ID=gene-VA249_RS15895;Name=VA249_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15895;old_locus_tag=VYA_29680 NZ_AP024166.1 Protein Homology CDS 264289 264789 . - 0 ID=cds-WP_221071485.1;Parent=gene-VA249_RS15895;Dbxref=Genbank:WP_221071485.1;Name=WP_221071485.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452898.1;locus_tag=VA249_RS15895;product=GNAT family N-acetyltransferase;protein_id=WP_221071485.1;transl_table=11 NZ_AP024166.1 RefSeq gene 265181 265951 . + . ID=gene-VA249_RS15900;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=VA249_RS15900;old_locus_tag=VYA_29690 NZ_AP024166.1 Protein Homology CDS 265181 265951 . + 0 ID=cds-WP_221071487.1;Parent=gene-VA249_RS15900;Dbxref=Genbank:WP_221071487.1;Name=WP_221071487.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818500.1;locus_tag=VA249_RS15900;product=ferredoxin-type protein NapG;protein_id=WP_221071487.1;transl_table=11 NZ_AP024166.1 RefSeq gene 265951 266805 . + . ID=gene-VA249_RS15905;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=VA249_RS15905;old_locus_tag=VYA_29700 NZ_AP024166.1 Protein Homology CDS 265951 266805 . + 0 ID=cds-WP_221071489.1;Parent=gene-VA249_RS15905;Dbxref=Genbank:WP_221071489.1;Name=WP_221071489.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818501.1;locus_tag=VA249_RS15905;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_221071489.1;transl_table=11 NZ_AP024166.1 RefSeq gene 266958 267707 . - . ID=gene-VA249_RS15910;Name=VA249_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15910;old_locus_tag=VYA_29710 NZ_AP024166.1 Protein Homology CDS 266958 267707 . - 0 ID=cds-WP_221071491.1;Parent=gene-VA249_RS15910;Dbxref=Genbank:WP_221071491.1;Name=WP_221071491.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818502.1;locus_tag=VA249_RS15910;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_221071491.1;transl_table=11 NZ_AP024166.1 RefSeq gene 267913 269094 . + . ID=gene-VA249_RS15915;Name=VA249_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15915;old_locus_tag=VYA_29720 NZ_AP024166.1 Protein Homology CDS 267913 269094 . + 0 ID=cds-WP_221071500.1;Parent=gene-VA249_RS15915;Dbxref=Genbank:WP_221071500.1;Name=WP_221071500.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432212.1;locus_tag=VA249_RS15915;product=MFS transporter;protein_id=WP_221071500.1;transl_table=11 NZ_AP024166.1 RefSeq gene 269218 270057 . - . ID=gene-VA249_RS15920;Name=VA249_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15920;old_locus_tag=VYA_29730 NZ_AP024166.1 Protein Homology CDS 269218 270057 . - 0 ID=cds-WP_211917868.1;Parent=gene-VA249_RS15920;Dbxref=Genbank:WP_211917868.1;Name=WP_211917868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017106514.1;locus_tag=VA249_RS15920;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_211917868.1;transl_table=11 NZ_AP024166.1 RefSeq gene 270054 271808 . - . ID=gene-VA249_RS15925;Name=VA249_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15925;old_locus_tag=VYA_29740 NZ_AP024166.1 Protein Homology CDS 270054 271808 . - 0 ID=cds-WP_221071502.1;Parent=gene-VA249_RS15925;Dbxref=Genbank:WP_221071502.1;Name=WP_221071502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452890.1;locus_tag=VA249_RS15925;product=DUF3744 domain-containing protein;protein_id=WP_221071502.1;transl_table=11 NZ_AP024166.1 RefSeq gene 271815 272363 . - . ID=gene-VA249_RS15930;Name=VA249_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15930;old_locus_tag=VYA_29750 NZ_AP024166.1 Protein Homology CDS 271815 272363 . - 0 ID=cds-WP_128812659.1;Parent=gene-VA249_RS15930;Dbxref=Genbank:WP_128812659.1;Name=WP_128812659.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432209.1;locus_tag=VA249_RS15930;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=WP_128812659.1;transl_table=11 NZ_AP024166.1 RefSeq gene 272672 273802 . - . ID=gene-VA249_RS15935;Name=VA249_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15935;old_locus_tag=VYA_29760 NZ_AP024166.1 Protein Homology CDS 272672 273802 . - 0 ID=cds-WP_221071504.1;Parent=gene-VA249_RS15935;Dbxref=Genbank:WP_221071504.1;Name=WP_221071504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082384.1;locus_tag=VA249_RS15935;product=HlyD family secretion protein;protein_id=WP_221071504.1;transl_table=11 NZ_AP024166.1 RefSeq gene 273802 274173 . - . ID=gene-VA249_RS15940;Name=VA249_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15940;old_locus_tag=VYA_29770 NZ_AP024166.1 Protein Homology CDS 273802 274173 . - 0 ID=cds-WP_221071506.1;Parent=gene-VA249_RS15940;Dbxref=Genbank:WP_221071506.1;Name=WP_221071506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452887.1;locus_tag=VA249_RS15940;product=DUF3302 domain-containing protein;protein_id=WP_221071506.1;transl_table=11 NZ_AP024166.1 RefSeq gene 274320 275210 . + . ID=gene-VA249_RS15945;Name=VA249_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15945;old_locus_tag=VYA_29780 NZ_AP024166.1 Protein Homology CDS 274320 275210 . + 0 ID=cds-WP_221071508.1;Parent=gene-VA249_RS15945;Dbxref=Genbank:WP_221071508.1;Name=WP_221071508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645156.1;locus_tag=VA249_RS15945;product=DMT family transporter;protein_id=WP_221071508.1;transl_table=11 NZ_AP024166.1 RefSeq gene 275327 276910 . - . ID=gene-VA249_RS15950;Name=VA249_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15950;old_locus_tag=VYA_29790 NZ_AP024166.1 Protein Homology CDS 275327 276910 . - 0 ID=cds-WP_221071510.1;Parent=gene-VA249_RS15950;Dbxref=Genbank:WP_221071510.1;Name=WP_221071510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197884.1;locus_tag=VA249_RS15950;product=GGDEF domain-containing protein;protein_id=WP_221071510.1;transl_table=11 NZ_AP024166.1 RefSeq gene 276894 278378 . - . ID=gene-VA249_RS15955;Name=VA249_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15955;old_locus_tag=VYA_29800 NZ_AP024166.1 Protein Homology CDS 276894 278378 . - 0 ID=cds-WP_221071514.1;Parent=gene-VA249_RS15955;Dbxref=Genbank:WP_221071514.1;Name=WP_221071514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741934.1;locus_tag=VA249_RS15955;product=hypothetical protein;protein_id=WP_221071514.1;transl_table=11 NZ_AP024166.1 RefSeq gene 278637 280106 . - . ID=gene-VA249_RS15960;Name=VA249_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15960;old_locus_tag=VYA_29810 NZ_AP024166.1 Protein Homology CDS 278637 280106 . - 0 ID=cds-WP_221071516.1;Parent=gene-VA249_RS15960;Dbxref=Genbank:WP_221071516.1;Name=WP_221071516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008215834.1;locus_tag=VA249_RS15960;product=lactate dehydrogenase;protein_id=WP_221071516.1;transl_table=11 NZ_AP024166.1 RefSeq gene 280206 280916 . - . ID=gene-VA249_RS15965;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=VA249_RS15965;old_locus_tag=VYA_29820 NZ_AP024166.1 Protein Homology CDS 280206 280916 . - 0 ID=cds-WP_005441106.1;Parent=gene-VA249_RS15965;Dbxref=Genbank:WP_005441106.1;Name=WP_005441106.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224891.1;locus_tag=VA249_RS15965;product=purine-nucleoside phosphorylase;protein_id=WP_005441106.1;transl_table=11 NZ_AP024166.1 RefSeq gene 281304 282254 . + . ID=gene-VA249_RS15970;Name=VA249_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15970;old_locus_tag=VYA_29830 NZ_AP024166.1 Protein Homology CDS 281304 282254 . + 0 ID=cds-WP_221071518.1;Parent=gene-VA249_RS15970;Dbxref=Genbank:WP_221071518.1;Name=WP_221071518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451039.1;locus_tag=VA249_RS15970;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_221071518.1;transl_table=11 NZ_AP024166.1 RefSeq gene 282244 283047 . + . ID=gene-VA249_RS15975;Name=VA249_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15975;old_locus_tag=VYA_29840 NZ_AP024166.1 Protein Homology CDS 282244 283047 . + 0 ID=cds-WP_221071521.1;Parent=gene-VA249_RS15975;Dbxref=Genbank:WP_221071521.1;Name=WP_221071521.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441103.1;locus_tag=VA249_RS15975;product=MerR family transcriptional regulator;protein_id=WP_221071521.1;transl_table=11 NZ_AP024166.1 RefSeq gene 283143 284558 . + . ID=gene-VA249_RS15980;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=VA249_RS15980;old_locus_tag=VYA_29850 NZ_AP024166.1 Protein Homology CDS 283143 284558 . + 0 ID=cds-WP_221071522.1;Parent=gene-VA249_RS15980;Dbxref=Genbank:WP_221071522.1;Name=WP_221071522.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645145.1;locus_tag=VA249_RS15980;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_221071522.1;transl_table=11 NZ_AP024166.1 RefSeq gene 284565 285491 . + . ID=gene-VA249_RS15985;Name=VA249_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15985;old_locus_tag=VYA_29860 NZ_AP024166.1 Protein Homology CDS 284565 285491 . + 0 ID=cds-WP_221071523.1;Parent=gene-VA249_RS15985;Dbxref=Genbank:WP_221071523.1;Name=WP_221071523.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535211.1;locus_tag=VA249_RS15985;product=L%2CD-transpeptidase family protein;protein_id=WP_221071523.1;transl_table=11 NZ_AP024166.1 RefSeq gene 285524 285778 . - . ID=gene-VA249_RS15990;Name=VA249_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15990;old_locus_tag=VYA_29870 NZ_AP024166.1 Protein Homology CDS 285524 285778 . - 0 ID=cds-WP_211917843.1;Parent=gene-VA249_RS15990;Dbxref=Genbank:WP_211917843.1;Name=WP_211917843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038492.1;locus_tag=VA249_RS15990;product=Lpp/OprI family alanine-zipper lipoprotein;protein_id=WP_211917843.1;transl_table=11 NZ_AP024166.1 RefSeq gene 286201 287544 . + . ID=gene-VA249_RS15995;Name=VA249_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS15995;old_locus_tag=VYA_29880 NZ_AP024166.1 Protein Homology CDS 286201 287544 . + 0 ID=cds-WP_221071524.1;Parent=gene-VA249_RS15995;Dbxref=Genbank:WP_221071524.1;Name=WP_221071524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999384.1;locus_tag=VA249_RS15995;product=DEAD/DEAH box helicase;protein_id=WP_221071524.1;transl_table=11 NZ_AP024166.1 RefSeq gene 287870 288691 . + . ID=gene-VA249_RS16000;Name=VA249_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16000;old_locus_tag=VYA_29890 NZ_AP024166.1 Protein Homology CDS 287870 288691 . + 0 ID=cds-WP_221071525.1;Parent=gene-VA249_RS16000;Dbxref=Genbank:WP_221071525.1;Name=WP_221071525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451068.1;locus_tag=VA249_RS16000;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_221071525.1;transl_table=11 NZ_AP024166.1 RefSeq gene 288790 289722 . + . ID=gene-VA249_RS16005;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=VA249_RS16005;old_locus_tag=VYA_29900 NZ_AP024166.1 Protein Homology CDS 288790 289722 . + 0 ID=cds-WP_221071526.1;Parent=gene-VA249_RS16005;Dbxref=Genbank:WP_221071526.1;Name=WP_221071526.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016767404.1;locus_tag=VA249_RS16005;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_221071526.1;transl_table=11 NZ_AP024166.1 RefSeq gene 289745 290608 . + . ID=gene-VA249_RS16010;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=VA249_RS16010;old_locus_tag=VYA_29910 NZ_AP024166.1 Protein Homology CDS 289745 290608 . + 0 ID=cds-WP_221071528.1;Parent=gene-VA249_RS16010;Dbxref=Genbank:WP_221071528.1;Name=WP_221071528.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234910.1;locus_tag=VA249_RS16010;product=phosphate ABC transporter permease PstA;protein_id=WP_221071528.1;transl_table=11 NZ_AP024166.1 RefSeq gene 290669 291418 . + . ID=gene-VA249_RS16015;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=VA249_RS16015;old_locus_tag=VYA_29920 NZ_AP024166.1 Protein Homology CDS 290669 291418 . + 0 ID=cds-WP_128812673.1;Parent=gene-VA249_RS16015;Dbxref=Genbank:WP_128812673.1;Name=WP_128812673.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452851.1;locus_tag=VA249_RS16015;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_128812673.1;transl_table=11 NZ_AP024166.1 RefSeq gene 291671 293794 . + . ID=gene-VA249_RS16020;Name=VA249_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16020;old_locus_tag=VYA_29930 NZ_AP024166.1 Protein Homology CDS 291671 293794 . + 0 ID=cds-WP_221071530.1;Parent=gene-VA249_RS16020;Dbxref=Genbank:WP_221071530.1;Name=WP_221071530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082407.1;locus_tag=VA249_RS16020;product=GGDEF domain-containing protein;protein_id=WP_221071530.1;transl_table=11 NZ_AP024166.1 RefSeq gene 293987 295636 . - . ID=gene-VA249_RS16025;Name=VA249_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16025;old_locus_tag=VYA_29940 NZ_AP024166.1 Protein Homology CDS 293987 295636 . - 0 ID=cds-WP_221071536.1;Parent=gene-VA249_RS16025;Dbxref=Genbank:WP_221071536.1;Name=WP_221071536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197855.1;locus_tag=VA249_RS16025;product=BatD family protein;protein_id=WP_221071536.1;transl_table=11 NZ_AP024166.1 RefSeq gene 295640 297535 . - . ID=gene-VA249_RS16030;Name=VA249_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16030;old_locus_tag=VYA_29950 NZ_AP024166.1 Protein Homology CDS 295640 297535 . - 0 ID=cds-WP_221071538.1;Parent=gene-VA249_RS16030;Dbxref=Genbank:WP_221071538.1;Name=WP_221071538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645118.1;locus_tag=VA249_RS16030;product=VWA domain-containing protein;protein_id=WP_221071538.1;transl_table=11 NZ_AP024166.1 RefSeq gene 297528 298532 . - . ID=gene-VA249_RS16035;Name=VA249_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16035;old_locus_tag=VYA_29960 NZ_AP024166.1 Protein Homology CDS 297528 298532 . - 0 ID=cds-WP_221071540.1;Parent=gene-VA249_RS16035;Dbxref=Genbank:WP_221071540.1;Name=WP_221071540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999400.1;locus_tag=VA249_RS16035;product=VWA domain-containing protein;protein_id=WP_221071540.1;transl_table=11 NZ_AP024166.1 RefSeq gene 298525 299001 . - . ID=gene-VA249_RS16040;Name=VA249_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16040;old_locus_tag=VYA_29970 NZ_AP024166.1 Protein Homology CDS 298525 299001 . - 0 ID=cds-WP_221071542.1;Parent=gene-VA249_RS16040;Dbxref=Genbank:WP_221071542.1;Name=WP_221071542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197346.1;locus_tag=VA249_RS16040;product=DUF4381 family protein;protein_id=WP_221071542.1;transl_table=11 NZ_AP024166.1 RefSeq gene 299044 299970 . - . ID=gene-VA249_RS16045;Name=VA249_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16045;old_locus_tag=VYA_29980 NZ_AP024166.1 Protein Homology CDS 299044 299970 . - 0 ID=cds-WP_221071544.1;Parent=gene-VA249_RS16045;Dbxref=Genbank:WP_221071544.1;Name=WP_221071544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009840902.1;locus_tag=VA249_RS16045;product=DUF58 domain-containing protein;protein_id=WP_221071544.1;transl_table=11 NZ_AP024166.1 RefSeq gene 299986 300942 . - . ID=gene-VA249_RS16050;Name=VA249_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16050;old_locus_tag=VYA_29990 NZ_AP024166.1 Protein Homology CDS 299986 300942 . - 0 ID=cds-WP_221071546.1;Parent=gene-VA249_RS16050;Dbxref=Genbank:WP_221071546.1;Name=WP_221071546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017108962.1;locus_tag=VA249_RS16050;product=MoxR family ATPase;protein_id=WP_221071546.1;transl_table=11 NZ_AP024166.1 RefSeq gene 301274 303190 . + . ID=gene-VA249_RS16055;Name=VA249_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16055;old_locus_tag=VYA_30000 NZ_AP024166.1 Protein Homology CDS 301274 303190 . + 0 ID=cds-WP_221071548.1;Parent=gene-VA249_RS16055;Dbxref=Genbank:WP_221071548.1;Name=WP_221071548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004732018.1;locus_tag=VA249_RS16055;product=methyl-accepting chemotaxis protein;protein_id=WP_221071548.1;transl_table=11 NZ_AP024166.1 RefSeq gene 303248 303448 . + . ID=gene-VA249_RS16060;Name=VA249_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16060;old_locus_tag=VYA_30010 NZ_AP024166.1 Protein Homology CDS 303248 303448 . + 0 ID=cds-WP_128812681.1;Parent=gene-VA249_RS16060;Dbxref=Genbank:WP_128812681.1;Name=WP_128812681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451091.1;locus_tag=VA249_RS16060;product=restriction endonuclease subunit S;protein_id=WP_128812681.1;transl_table=11 NZ_AP024166.1 RefSeq gene 303654 304325 . + . ID=gene-VA249_RS16065;Name=VA249_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16065;old_locus_tag=VYA_30020 NZ_AP024166.1 Protein Homology CDS 303654 304325 . + 0 ID=cds-WP_221071550.1;Parent=gene-VA249_RS16065;Dbxref=Genbank:WP_221071550.1;Name=WP_221071550.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704925.1;locus_tag=VA249_RS16065;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_221071550.1;transl_table=11 NZ_AP024166.1 RefSeq gene 304440 304997 . + . ID=gene-VA249_RS16070;Name=VA249_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16070;old_locus_tag=VYA_30030 NZ_AP024166.1 Protein Homology CDS 304440 304997 . + 0 ID=cds-WP_128812682.1;Parent=gene-VA249_RS16070;Dbxref=Genbank:WP_128812682.1;Name=WP_128812682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845567.1;locus_tag=VA249_RS16070;product=sugar O-acetyltransferase;protein_id=WP_128812682.1;transl_table=11 NZ_AP024166.1 RefSeq gene 305182 305898 . + . ID=gene-VA249_RS16075;Name=VA249_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16075;old_locus_tag=VYA_30040 NZ_AP024166.1 Protein Homology CDS 305182 305898 . + 0 ID=cds-WP_221071552.1;Parent=gene-VA249_RS16075;Dbxref=Genbank:WP_221071552.1;Name=WP_221071552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818524.1;locus_tag=VA249_RS16075;product=SDR family oxidoreductase;protein_id=WP_221071552.1;transl_table=11 NZ_AP024166.1 RefSeq gene 305895 308024 . - . ID=gene-VA249_RS16080;Name=VA249_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16080;old_locus_tag=VYA_30050 NZ_AP024166.1 Protein Homology CDS 305895 308024 . - 0 ID=cds-WP_221071563.1;Parent=gene-VA249_RS16080;Dbxref=Genbank:WP_221071563.1;Name=WP_221071563.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=VA249_RS16080;product=diguanylate cyclase;protein_id=WP_221071563.1;transl_table=11 NZ_AP024166.1 RefSeq gene 308853 320132 . + . ID=gene-VA249_RS16085;Name=VA249_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16085;old_locus_tag=VYA_30060 NZ_AP024166.1 Protein Homology CDS 308853 320132 . + 0 ID=cds-WP_225927154.1;Parent=gene-VA249_RS16085;Dbxref=Genbank:WP_225927154.1;Name=WP_225927154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005485194.1;locus_tag=VA249_RS16085;product=DUF11 domain-containing protein;protein_id=WP_225927154.1;transl_table=11 NZ_AP024166.1 RefSeq gene 320200 323715 . + . ID=gene-VA249_RS16090;Name=VA249_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16090;old_locus_tag=VYA_30070 NZ_AP024166.1 Protein Homology CDS 320200 323715 . + 0 ID=cds-WP_221071564.1;Parent=gene-VA249_RS16090;Dbxref=Genbank:WP_221071564.1;Name=WP_221071564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999416.1;locus_tag=VA249_RS16090;product=hypothetical protein;protein_id=WP_221071564.1;transl_table=11 NZ_AP024166.1 RefSeq gene 323725 324630 . + . ID=gene-VA249_RS16095;Name=VA249_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16095;old_locus_tag=VYA_30080 NZ_AP024166.1 Protein Homology CDS 323725 324630 . + 0 ID=cds-WP_221071566.1;Parent=gene-VA249_RS16095;Dbxref=Genbank:WP_221071566.1;Name=WP_221071566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432116.1;locus_tag=VA249_RS16095;product=OmpA family protein;protein_id=WP_221071566.1;transl_table=11 NZ_AP024166.1 RefSeq gene 324709 325557 . + . ID=gene-VA249_RS16100;Name=VA249_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16100;old_locus_tag=VYA_30090 NZ_AP024166.1 Protein Homology CDS 324709 325557 . + 0 ID=cds-WP_221071568.1;Parent=gene-VA249_RS16100;Dbxref=Genbank:WP_221071568.1;Name=WP_221071568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452782.1;locus_tag=VA249_RS16100;product=mechanosensitive ion channel family protein;protein_id=WP_221071568.1;transl_table=11 NZ_AP024166.1 RefSeq gene 325919 327967 . + . ID=gene-VA249_RS16105;Name=VA249_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16105;old_locus_tag=VYA_30100 NZ_AP024166.1 Protein Homology CDS 325919 327967 . + 0 ID=cds-WP_221071570.1;Parent=gene-VA249_RS16105;Dbxref=Genbank:WP_221071570.1;Name=WP_221071570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313539.1;locus_tag=VA249_RS16105;product=EAL domain-containing protein;protein_id=WP_221071570.1;transl_table=11 NZ_AP024166.1 RefSeq gene 328490 330544 . + . ID=gene-VA249_RS16110;Name=VA249_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16110;old_locus_tag=VYA_30110 NZ_AP024166.1 Protein Homology CDS 328490 330544 . + 0 ID=cds-WP_221071572.1;Parent=gene-VA249_RS16110;Dbxref=Genbank:WP_221071572.1;Name=WP_221071572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006711563.1;locus_tag=VA249_RS16110;product=EAL domain-containing protein;protein_id=WP_221071572.1;transl_table=11 NZ_AP024166.1 RefSeq gene 330696 331148 . - . ID=gene-VA249_RS16115;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=VA249_RS16115;old_locus_tag=VYA_30120 NZ_AP024166.1 Protein Homology CDS 330696 331148 . - 0 ID=cds-WP_221071573.1;Parent=gene-VA249_RS16115;Dbxref=Genbank:WP_221071573.1;Name=WP_221071573.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;gene=azu;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392455.1;locus_tag=VA249_RS16115;product=azurin;protein_id=WP_221071573.1;transl_table=11 NZ_AP024166.1 RefSeq gene 331766 335395 . + . ID=gene-VA249_RS16120;Name=VA249_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16120;old_locus_tag=VYA_30130 NZ_AP024166.1 Protein Homology CDS 331766 335395 . + 0 ID=cds-WP_221071575.1;Parent=gene-VA249_RS16120;Dbxref=Genbank:WP_221071575.1;Name=WP_221071575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189565.1;locus_tag=VA249_RS16120;product=Ig-like domain-containing protein;protein_id=WP_221071575.1;transl_table=11 NZ_AP024166.1 RefSeq gene 335672 336901 . + . ID=gene-VA249_RS16125;Name=VA249_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16125;old_locus_tag=VYA_30140 NZ_AP024166.1 Protein Homology CDS 335672 336901 . + 0 ID=cds-WP_221071577.1;Parent=gene-VA249_RS16125;Dbxref=Genbank:WP_221071577.1;Name=WP_221071577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432099.1;locus_tag=VA249_RS16125;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_221071577.1;transl_table=11 NZ_AP024166.1 RefSeq gene 336994 338301 . + . ID=gene-VA249_RS16130;Name=VA249_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16130;old_locus_tag=VYA_30150 NZ_AP024166.1 Protein Homology CDS 336994 338301 . + 0 ID=cds-WP_221071579.1;Parent=gene-VA249_RS16130;Dbxref=Genbank:WP_221071579.1;Name=WP_221071579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197156.1;locus_tag=VA249_RS16130;product=cation:dicarboxylase symporter family transporter;protein_id=WP_221071579.1;transl_table=11 NZ_AP024166.1 RefSeq gene 338395 339042 . - . ID=gene-VA249_RS16135;Name=VA249_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16135;old_locus_tag=VYA_30160 NZ_AP024166.1 Protein Homology CDS 338395 339042 . - 0 ID=cds-WP_221071581.1;Parent=gene-VA249_RS16135;Dbxref=Genbank:WP_221071581.1;Name=WP_221071581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536872.1;locus_tag=VA249_RS16135;product=HAD family phosphatase;protein_id=WP_221071581.1;transl_table=11 NZ_AP024166.1 RefSeq gene 339336 340418 . + . ID=gene-VA249_RS16140;Name=VA249_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16140;old_locus_tag=VYA_30170 NZ_AP024166.1 Protein Homology CDS 339336 340418 . + 0 ID=cds-WP_221071583.1;Parent=gene-VA249_RS16140;Dbxref=Genbank:WP_221071583.1;Name=WP_221071583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696760.1;locus_tag=VA249_RS16140;product=beta-propeller fold lactonase family protein;protein_id=WP_221071583.1;transl_table=11 NZ_AP024166.1 RefSeq gene 340555 341088 . + . ID=gene-VA249_RS16145;Name=VA249_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16145;old_locus_tag=VYA_30180 NZ_AP024166.1 Protein Homology CDS 340555 341088 . + 0 ID=cds-WP_221071585.1;Parent=gene-VA249_RS16145;Dbxref=Genbank:WP_221071585.1;Name=WP_221071585.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017632133.1;locus_tag=VA249_RS16145;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_221071585.1;transl_table=11 NZ_AP024166.1 RefSeq gene 341115 341897 . + . ID=gene-VA249_RS16150;Name=VA249_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16150;old_locus_tag=VYA_30190 NZ_AP024166.1 Protein Homology CDS 341115 341897 . + 0 ID=cds-WP_221072195.1;Parent=gene-VA249_RS16150;Dbxref=Genbank:WP_221072195.1;Name=WP_221072195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534607.1;locus_tag=VA249_RS16150;product=helix-turn-helix transcriptional regulator;protein_id=WP_221072195.1;transl_table=11 NZ_AP024166.1 RefSeq gene 341968 343023 . - . ID=gene-VA249_RS16155;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=VA249_RS16155;old_locus_tag=VYA_30200 NZ_AP024166.1 Protein Homology CDS 341968 343023 . - 0 ID=cds-WP_221071587.1;Parent=gene-VA249_RS16155;Dbxref=Genbank:WP_221071587.1;Name=WP_221071587.1;Ontology_term=GO:0008490;gbkey=CDS;gene=arsB;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435488.1;locus_tag=VA249_RS16155;product=ACR3 family arsenite efflux transporter;protein_id=WP_221071587.1;transl_table=11 NZ_AP024166.1 RefSeq gene 343109 343450 . - . ID=gene-VA249_RS16160;Name=VA249_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16160;old_locus_tag=VYA_30210 NZ_AP024166.1 Protein Homology CDS 343109 343450 . - 0 ID=cds-WP_221071589.1;Parent=gene-VA249_RS16160;Dbxref=Genbank:WP_221071589.1;Name=WP_221071589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435489.1;locus_tag=VA249_RS16160;product=winged helix-turn-helix domain-containing protein;protein_id=WP_221071589.1;transl_table=11 NZ_AP024166.1 RefSeq gene 343637 344554 . - . ID=gene-VA249_RS16165;Name=VA249_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16165;old_locus_tag=VYA_30220 NZ_AP024166.1 Protein Homology CDS 343637 344554 . - 0 ID=cds-WP_221071591.1;Parent=gene-VA249_RS16165;Dbxref=Genbank:WP_221071591.1;Name=WP_221071591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004748136.1;locus_tag=VA249_RS16165;product=cation transporter;protein_id=WP_221071591.1;transl_table=11 NZ_AP024166.1 RefSeq gene 345114 346892 . + . ID=gene-VA249_RS16170;Name=VA249_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16170;old_locus_tag=VYA_30230 NZ_AP024166.1 Protein Homology CDS 345114 346892 . + 0 ID=cds-WP_221071594.1;Parent=gene-VA249_RS16170;Dbxref=Genbank:WP_221071594.1;Name=WP_221071594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451138.1;locus_tag=VA249_RS16170;product=SgrR family transcriptional regulator;protein_id=WP_221071594.1;transl_table=11 NZ_AP024166.1 RefSeq gene 346940 347257 . - . ID=gene-VA249_RS16175;Name=VA249_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16175;old_locus_tag=VYA_30240 NZ_AP024166.1 Protein Homology CDS 346940 347257 . - 0 ID=cds-WP_221071596.1;Parent=gene-VA249_RS16175;Dbxref=Genbank:WP_221071596.1;Name=WP_221071596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452444.1;locus_tag=VA249_RS16175;product=helix-turn-helix domain-containing protein;protein_id=WP_221071596.1;transl_table=11 NZ_AP024166.1 RefSeq gene 347397 347729 . + . ID=gene-VA249_RS16180;Name=VA249_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16180;old_locus_tag=VYA_30250 NZ_AP024166.1 Protein Homology CDS 347397 347729 . + 0 ID=cds-WP_221071598.1;Parent=gene-VA249_RS16180;Dbxref=Genbank:WP_221071598.1;Name=WP_221071598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194780.1;locus_tag=VA249_RS16180;product=hypothetical protein;protein_id=WP_221071598.1;transl_table=11 NZ_AP024166.1 RefSeq gene 348454 349611 . + . ID=gene-VA249_RS16185;Name=VA249_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16185;old_locus_tag=VYA_30260 NZ_AP024166.1 Protein Homology CDS 348454 349611 . + 0 ID=cds-WP_221071600.1;Parent=gene-VA249_RS16185;Dbxref=Genbank:WP_221071600.1;Name=WP_221071600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129785.1;locus_tag=VA249_RS16185;product=tyrosine transporter;protein_id=WP_221071600.1;transl_table=11 NZ_AP024166.1 RefSeq gene 349947 351818 . - . ID=gene-VA249_RS16190;Name=VA249_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16190;old_locus_tag=VYA_30270 NZ_AP024166.1 Protein Homology CDS 349947 351818 . - 0 ID=cds-WP_221071603.1;Parent=gene-VA249_RS16190;Dbxref=Genbank:WP_221071603.1;Name=WP_221071603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016788092.1;locus_tag=VA249_RS16190;product=methyl-accepting chemotaxis protein;protein_id=WP_221071603.1;transl_table=11 NZ_AP024166.1 RefSeq gene 352222 353586 . - . ID=gene-VA249_RS16195;Name=VA249_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16195;old_locus_tag=VYA_30280 NZ_AP024166.1 Protein Homology CDS 352222 353586 . - 0 ID=cds-WP_221071605.1;Parent=gene-VA249_RS16195;Dbxref=Genbank:WP_221071605.1;Name=WP_221071605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004731847.1;locus_tag=VA249_RS16195;product=YjiH family protein;protein_id=WP_221071605.1;transl_table=11 NZ_AP024166.1 RefSeq gene 353968 354639 . - . ID=gene-VA249_RS16200;Name=VA249_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16200;old_locus_tag=VYA_30290 NZ_AP024166.1 Protein Homology CDS 353968 354639 . - 0 ID=cds-WP_221071607.1;Parent=gene-VA249_RS16200;Dbxref=Genbank:WP_221071607.1;Name=WP_221071607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435539.1;locus_tag=VA249_RS16200;product=DUF1275 family protein;protein_id=WP_221071607.1;transl_table=11 NZ_AP024166.1 RefSeq gene 354829 355230 . - . ID=gene-VA249_RS16205;Name=VA249_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16205 NZ_AP024166.1 Protein Homology CDS 354829 355230 . - 0 ID=cds-WP_221071609.1;Parent=gene-VA249_RS16205;Dbxref=Genbank:WP_221071609.1;Name=WP_221071609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005489271.1;locus_tag=VA249_RS16205;product=GFA family protein;protein_id=WP_221071609.1;transl_table=11 NZ_AP024166.1 RefSeq gene 355401 356030 . + . ID=gene-VA249_RS16210;Name=VA249_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16210;old_locus_tag=VYA_30300 NZ_AP024166.1 Protein Homology CDS 355401 356030 . + 0 ID=cds-WP_221071611.1;Parent=gene-VA249_RS16210;Dbxref=Genbank:WP_221071611.1;Name=WP_221071611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129776.1;locus_tag=VA249_RS16210;product=hypothetical protein;protein_id=WP_221071611.1;transl_table=11 NZ_AP024166.1 RefSeq gene 356227 357441 . + . ID=gene-VA249_RS16215;Name=VA249_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16215;old_locus_tag=VYA_30310 NZ_AP024166.1 Protein Homology CDS 356227 357441 . + 0 ID=cds-WP_225923978.1;Parent=gene-VA249_RS16215;Dbxref=Genbank:WP_225923978.1;Name=WP_225923978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005482597.1;locus_tag=VA249_RS16215;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_225923978.1;transl_table=11 NZ_AP024166.1 RefSeq gene 357714 358061 . + . ID=gene-VA249_RS16220;Name=VA249_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16220;old_locus_tag=VYA_30320 NZ_AP024166.1 Protein Homology CDS 357714 358061 . + 0 ID=cds-WP_128812704.1;Parent=gene-VA249_RS16220;Dbxref=Genbank:WP_128812704.1;Name=WP_128812704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841882.1;locus_tag=VA249_RS16220;product=hypothetical protein;protein_id=WP_128812704.1;transl_table=11 NZ_AP024166.1 RefSeq gene 358196 358330 . + . ID=gene-VA249_RS24225;Name=VA249_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24225;old_locus_tag=VYA_30330 NZ_AP024166.1 Protein Homology CDS 358196 358330 . + 0 ID=cds-WP_256997338.1;Parent=gene-VA249_RS24225;Dbxref=Genbank:WP_256997338.1;Name=WP_256997338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706169.1;locus_tag=VA249_RS24225;product=hypothetical protein;protein_id=WP_256997338.1;transl_table=11 NZ_AP024166.1 RefSeq gene 358411 359025 . - . ID=gene-VA249_RS16225;Name=VA249_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16225;old_locus_tag=VYA_30340 NZ_AP024166.1 Protein Homology CDS 358411 359025 . - 0 ID=cds-WP_128812705.1;Parent=gene-VA249_RS16225;Dbxref=Genbank:WP_128812705.1;Name=WP_128812705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452599.1;locus_tag=VA249_RS16225;product=glutaredoxin;protein_id=WP_128812705.1;transl_table=11 NZ_AP024166.1 RefSeq gene 359088 359927 . - . ID=gene-VA249_RS16230;Name=VA249_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16230;old_locus_tag=VYA_30350 NZ_AP024166.1 Protein Homology CDS 359088 359927 . - 0 ID=cds-WP_221072197.1;Parent=gene-VA249_RS16230;Dbxref=Genbank:WP_221072197.1;Name=WP_221072197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647169.1;locus_tag=VA249_RS16230;product=DMT family transporter;protein_id=WP_221072197.1;transl_table=11 NZ_AP024166.1 RefSeq gene 360340 361305 . - . ID=gene-VA249_RS16235;Name=VA249_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16235;old_locus_tag=VYA_30360 NZ_AP024166.1 Protein Homology CDS 360340 361305 . - 0 ID=cds-WP_221071620.1;Parent=gene-VA249_RS16235;Dbxref=Genbank:WP_221071620.1;Name=WP_221071620.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234653.1;locus_tag=VA249_RS16235;product=porin;protein_id=WP_221071620.1;transl_table=11 NZ_AP024166.1 RefSeq gene 361866 362960 . + . ID=gene-VA249_RS16240;Name=VA249_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16240;old_locus_tag=VYA_30370 NZ_AP024166.1 Protein Homology CDS 361866 362960 . + 0 ID=cds-WP_221071621.1;Parent=gene-VA249_RS16240;Dbxref=Genbank:WP_221071621.1;Name=WP_221071621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821605.1;locus_tag=VA249_RS16240;product=porin;protein_id=WP_221071621.1;transl_table=11 NZ_AP024166.1 RefSeq gene 363157 363771 . + . ID=gene-VA249_RS16245;Name=VA249_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16245;old_locus_tag=VYA_30380 NZ_AP024166.1 Protein Homology CDS 363157 363771 . + 0 ID=cds-WP_221071622.1;Parent=gene-VA249_RS16245;Dbxref=Genbank:WP_221071622.1;Name=WP_221071622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194799.1;locus_tag=VA249_RS16245;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_221071622.1;transl_table=11 NZ_AP024166.1 RefSeq gene 363792 364103 . - . ID=gene-VA249_RS16250;Name=VA249_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16250;old_locus_tag=VYA_30390 NZ_AP024166.1 Protein Homology CDS 363792 364103 . - 0 ID=cds-WP_221071623.1;Parent=gene-VA249_RS16250;Dbxref=Genbank:WP_221071623.1;Name=WP_221071623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435565.1;locus_tag=VA249_RS16250;product=AzlD domain-containing protein;protein_id=WP_221071623.1;transl_table=11 NZ_AP024166.1 RefSeq gene 364100 364831 . - . ID=gene-VA249_RS16255;Name=VA249_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16255;old_locus_tag=VYA_30400 NZ_AP024166.1 Protein Homology CDS 364100 364831 . - 0 ID=cds-WP_221071624.1;Parent=gene-VA249_RS16255;Dbxref=Genbank:WP_221071624.1;Name=WP_221071624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425997.1;locus_tag=VA249_RS16255;product=AzlC family ABC transporter permease;protein_id=WP_221071624.1;transl_table=11 NZ_AP024166.1 RefSeq gene 364831 365352 . - . ID=gene-VA249_RS16260;Name=VA249_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16260;old_locus_tag=VYA_30410 NZ_AP024166.1 Protein Homology CDS 364831 365352 . - 0 ID=cds-WP_221071625.1;Parent=gene-VA249_RS16260;Dbxref=Genbank:WP_221071625.1;Name=WP_221071625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019276191.1;locus_tag=VA249_RS16260;product=macro domain-containing protein;protein_id=WP_221071625.1;transl_table=11 NZ_AP024166.1 RefSeq gene 365605 366237 . + . ID=gene-VA249_RS16265;Name=VA249_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16265;old_locus_tag=VYA_30420 NZ_AP024166.1 Protein Homology CDS 365605 366237 . + 0 ID=cds-WP_221071627.1;Parent=gene-VA249_RS16265;Dbxref=Genbank:WP_221071627.1;Name=WP_221071627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194801.1;locus_tag=VA249_RS16265;product=LysE family translocator;protein_id=WP_221071627.1;transl_table=11 NZ_AP024166.1 RefSeq gene 366317 368011 . - . ID=gene-VA249_RS16270;Name=VA249_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16270;old_locus_tag=VYA_30430 NZ_AP024166.1 Protein Homology CDS 366317 368011 . - 0 ID=cds-WP_221071629.1;Parent=gene-VA249_RS16270;Dbxref=Genbank:WP_221071629.1;Name=WP_221071629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535536.1;locus_tag=VA249_RS16270;product=phospho-sugar mutase;protein_id=WP_221071629.1;transl_table=11 NZ_AP024166.1 RefSeq gene 368339 369502 . + . ID=gene-VA249_RS16275;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=VA249_RS16275;old_locus_tag=VYA_30440 NZ_AP024166.1 Protein Homology CDS 368339 369502 . + 0 ID=cds-WP_221071631.1;Parent=gene-VA249_RS16275;Dbxref=Genbank:WP_221071631.1;Name=WP_221071631.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335302.1;locus_tag=VA249_RS16275;product=cytochrome c oxidase subunit II;protein_id=WP_221071631.1;transl_table=11 NZ_AP024166.1 RefSeq gene 369499 371139 . + . ID=gene-VA249_RS16280;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=VA249_RS16280;old_locus_tag=VYA_30450 NZ_AP024166.1 Protein Homology CDS 369499 371139 . + 0 ID=cds-WP_221071633.1;Parent=gene-VA249_RS16280;Dbxref=Genbank:WP_221071633.1;Name=WP_221071633.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696372.1;locus_tag=VA249_RS16280;product=cytochrome c oxidase subunit I;protein_id=WP_221071633.1;transl_table=11 NZ_AP024166.1 RefSeq gene 371161 371781 . + . ID=gene-VA249_RS16285;Name=VA249_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16285;old_locus_tag=VYA_30460 NZ_AP024166.1 Protein Homology CDS 371161 371781 . + 0 ID=cds-WP_221071635.1;Parent=gene-VA249_RS16285;Dbxref=Genbank:WP_221071635.1;Name=WP_221071635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696371.1;locus_tag=VA249_RS16285;product=cytochrome c oxidase assembly protein;protein_id=WP_221071635.1;transl_table=11 NZ_AP024166.1 RefSeq gene 371793 372677 . + . ID=gene-VA249_RS16290;Name=VA249_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16290;old_locus_tag=VYA_30470 NZ_AP024166.1 Protein Homology CDS 371793 372677 . + 0 ID=cds-WP_221071637.1;Parent=gene-VA249_RS16290;Dbxref=Genbank:WP_221071637.1;Name=WP_221071637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004730084.1;locus_tag=VA249_RS16290;product=cytochrome c oxidase subunit 3;protein_id=WP_221071637.1;transl_table=11 NZ_AP024166.1 RefSeq gene 372690 372926 . - . ID=gene-VA249_RS16295;Name=VA249_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16295;old_locus_tag=VYA_30480 NZ_AP024166.1 Protein Homology CDS 372690 372926 . - 0 ID=cds-WP_221071640.1;Parent=gene-VA249_RS16295;Dbxref=Genbank:WP_221071640.1;Name=WP_221071640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452392.1;locus_tag=VA249_RS16295;product=DUF2909 family protein;protein_id=WP_221071640.1;transl_table=11 NZ_AP024166.1 RefSeq gene 372925 373692 . + . ID=gene-VA249_RS16300;Name=VA249_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16300;old_locus_tag=VYA_30490 NZ_AP024166.1 Protein Homology CDS 372925 373692 . + 0 ID=cds-WP_221072198.1;Parent=gene-VA249_RS16300;Dbxref=Genbank:WP_221072198.1;Name=WP_221072198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194807.1;locus_tag=VA249_RS16300;product=SURF1 family protein;protein_id=WP_221072198.1;transl_table=11 NZ_AP024166.1 RefSeq gene 373689 374225 . + . ID=gene-VA249_RS16305;Name=VA249_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16305;old_locus_tag=VYA_30500 NZ_AP024166.1 Protein Homology CDS 373689 374225 . + 0 ID=cds-WP_221071641.1;Parent=gene-VA249_RS16305;Dbxref=Genbank:WP_221071641.1;Name=WP_221071641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129743.1;locus_tag=VA249_RS16305;product=cytochrome oxidase biogenesis cluster protein;protein_id=WP_221071641.1;transl_table=11 NZ_AP024166.1 RefSeq gene 374234 375253 . + . ID=gene-VA249_RS16310;Name=VA249_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16310;old_locus_tag=VYA_30510 NZ_AP024166.1 Protein Homology CDS 374234 375253 . + 0 ID=cds-WP_221071644.1;Parent=gene-VA249_RS16310;Dbxref=Genbank:WP_221071644.1;Name=WP_221071644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425977.1;locus_tag=VA249_RS16310;product=heme A synthase;protein_id=WP_221071644.1;transl_table=11 NZ_AP024166.1 RefSeq gene 375246 376157 . + . ID=gene-VA249_RS16315;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=VA249_RS16315;old_locus_tag=VYA_30520 NZ_AP024166.1 Protein Homology CDS 375246 376157 . + 0 ID=cds-WP_221071646.1;Parent=gene-VA249_RS16315;Dbxref=Genbank:WP_221071646.1;Name=WP_221071646.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818640.1;locus_tag=VA249_RS16315;product=heme o synthase;protein_id=WP_221071646.1;transl_table=11 NZ_AP024166.1 RefSeq gene 376632 377609 . - . ID=gene-VA249_RS16320;Name=VA249_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16320;old_locus_tag=VYA_30530 NZ_AP024166.1 Protein Homology CDS 376632 377609 . - 0 ID=cds-WP_221071648.1;Parent=gene-VA249_RS16320;Dbxref=Genbank:WP_221071648.1;Name=WP_221071648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005499267.1;locus_tag=VA249_RS16320;product=OmpA family protein;protein_id=WP_221071648.1;transl_table=11 NZ_AP024166.1 RefSeq gene 378072 379124 . + . ID=gene-VA249_RS16325;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=VA249_RS16325;old_locus_tag=VYA_30540 NZ_AP024166.1 Protein Homology CDS 378072 379124 . + 0 ID=cds-WP_221071649.1;Parent=gene-VA249_RS16325;Dbxref=Genbank:WP_221071649.1;Name=WP_221071649.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004742396.1;locus_tag=VA249_RS16325;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_221071649.1;transl_table=11 NZ_AP024166.1 RefSeq gene 379539 381101 . + . ID=gene-VA249_RS16330;Name=VA249_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16330;old_locus_tag=VYA_30550 NZ_AP024166.1 Protein Homology CDS 379539 381101 . + 0 ID=cds-WP_221071652.1;Parent=gene-VA249_RS16330;Dbxref=Genbank:WP_221071652.1;Name=WP_221071652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004731574.1;locus_tag=VA249_RS16330;product=methyl-accepting chemotaxis protein;protein_id=WP_221071652.1;transl_table=11 NZ_AP024166.1 RefSeq gene 381220 383211 . - . ID=gene-VA249_RS16335;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=VA249_RS16335;old_locus_tag=VYA_30560 NZ_AP024166.1 Protein Homology CDS 381220 383211 . - 0 ID=cds-WP_221071653.1;Parent=gene-VA249_RS16335;Dbxref=Genbank:WP_221071653.1;Name=WP_221071653.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635202.1;locus_tag=VA249_RS16335;product=transketolase;protein_id=WP_221071653.1;transl_table=11 NZ_AP024166.1 RefSeq gene 383292 384242 . - . ID=gene-VA249_RS16340;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=VA249_RS16340;old_locus_tag=VYA_30570 NZ_AP024166.1 Protein Homology CDS 383292 384242 . - 0 ID=cds-WP_221071655.1;Parent=gene-VA249_RS16340;Dbxref=Genbank:WP_221071655.1;Name=WP_221071655.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704058.1;locus_tag=VA249_RS16340;product=transaldolase;protein_id=WP_221071655.1;transl_table=11 NZ_AP024166.1 RefSeq gene 384708 385709 . + . ID=gene-VA249_RS16345;Name=VA249_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16345;old_locus_tag=VYA_30580 NZ_AP024166.1 Protein Homology CDS 384708 385709 . + 0 ID=cds-WP_221071657.1;Parent=gene-VA249_RS16345;Dbxref=Genbank:WP_221071657.1;Name=WP_221071657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425961.1;locus_tag=VA249_RS16345;product=sugar-binding transcriptional regulator;protein_id=WP_221071657.1;transl_table=11 NZ_AP024166.1 RefSeq gene 385839 387134 . + . ID=gene-VA249_RS16350;Name=VA249_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16350;old_locus_tag=VYA_30590 NZ_AP024166.1 Protein Homology CDS 385839 387134 . + 0 ID=cds-WP_221071660.1;Parent=gene-VA249_RS16350;Dbxref=Genbank:WP_221071660.1;Name=WP_221071660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313412.1;locus_tag=VA249_RS16350;product=glycoside hydrolase family 18 protein;protein_id=WP_221071660.1;transl_table=11 NZ_AP024166.1 RefSeq gene 387221 388051 . - . ID=gene-VA249_RS16355;Name=VA249_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16355;old_locus_tag=VYA_30600 NZ_AP024166.1 Protein Homology CDS 387221 388051 . - 0 ID=cds-WP_221071662.1;Parent=gene-VA249_RS16355;Dbxref=Genbank:WP_221071662.1;Name=WP_221071662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005387672.1;locus_tag=VA249_RS16355;product=sulfurtransferase;protein_id=WP_221071662.1;transl_table=11 NZ_AP024166.1 RefSeq gene 388256 388567 . - . ID=gene-VA249_RS16360;Name=VA249_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16360 NZ_AP024166.1 Protein Homology CDS 388256 388567 . - 0 ID=cds-WP_221071664.1;Parent=gene-VA249_RS16360;Dbxref=Genbank:WP_221071664.1;Name=WP_221071664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129730.1;locus_tag=VA249_RS16360;product=hypothetical protein;protein_id=WP_221071664.1;transl_table=11 NZ_AP024166.1 RefSeq gene 388674 389111 . - . ID=gene-VA249_RS16365;Name=VA249_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16365;old_locus_tag=VYA_30610 NZ_AP024166.1 Protein Homology CDS 388674 389111 . - 0 ID=cds-WP_221071665.1;Parent=gene-VA249_RS16365;Dbxref=Genbank:WP_221071665.1;Name=WP_221071665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005499254.1;locus_tag=VA249_RS16365;product=hypothetical protein;protein_id=WP_221071665.1;transl_table=11 NZ_AP024166.1 RefSeq gene 389124 391229 . - . ID=gene-VA249_RS16370;Name=VA249_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16370;old_locus_tag=VYA_30620 NZ_AP024166.1 Protein Homology CDS 389124 391229 . - 0 ID=cds-WP_221071666.1;Parent=gene-VA249_RS16370;Dbxref=Genbank:WP_221071666.1;Name=WP_221071666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635206.1;locus_tag=VA249_RS16370;product=LruC domain-containing protein;protein_id=WP_221071666.1;transl_table=11 NZ_AP024166.1 RefSeq gene 391509 392261 . - . ID=gene-VA249_RS16375;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=VA249_RS16375;old_locus_tag=VYA_30630 NZ_AP024166.1 Protein Homology CDS 391509 392261 . - 0 ID=cds-WP_221071670.1;Parent=gene-VA249_RS16375;Dbxref=Genbank:WP_221071670.1;Name=WP_221071670.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704065.1;locus_tag=VA249_RS16375;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_221071670.1;transl_table=11 NZ_AP024166.1 RefSeq gene 392271 393506 . - . ID=gene-VA249_RS16380;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=VA249_RS16380;old_locus_tag=VYA_30640 NZ_AP024166.1 Protein Homology CDS 392271 393506 . - 0 ID=cds-WP_221071672.1;Parent=gene-VA249_RS16380;Dbxref=Genbank:WP_221071672.1;Name=WP_221071672.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019822860.1;locus_tag=VA249_RS16380;product=molybdopterin molybdotransferase MoeA;protein_id=WP_221071672.1;transl_table=11 NZ_AP024166.1 RefSeq gene 393796 394449 . + . ID=gene-VA249_RS16385;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=VA249_RS16385;old_locus_tag=VYA_30650 NZ_AP024166.1 Protein Homology CDS 393796 394449 . + 0 ID=cds-WP_221071674.1;Parent=gene-VA249_RS16385;Dbxref=Genbank:WP_221071674.1;Name=WP_221071674.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011081489.1;locus_tag=VA249_RS16385;product=GTP cyclohydrolase I FolE;protein_id=WP_221071674.1;transl_table=11 NZ_AP024166.1 RefSeq gene 394723 395964 . + . ID=gene-VA249_RS16390;Name=VA249_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16390;old_locus_tag=VYA_30660 NZ_AP024166.1 Protein Homology CDS 394723 395964 . + 0 ID=cds-WP_221071676.1;Parent=gene-VA249_RS16390;Dbxref=Genbank:WP_221071676.1;Name=WP_221071676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425948.1;locus_tag=VA249_RS16390;product=divalent metal cation transporter;protein_id=WP_221071676.1;transl_table=11 NZ_AP024166.1 RefSeq gene 396169 397134 . - . ID=gene-VA249_RS16395;Name=VA249_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16395;old_locus_tag=VYA_30670 NZ_AP024166.1 Protein Homology CDS 396169 397134 . - 0 ID=cds-WP_221071679.1;Parent=gene-VA249_RS16395;Dbxref=Genbank:WP_221071679.1;Name=WP_221071679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447389.1;locus_tag=VA249_RS16395;product=TDT family transporter;protein_id=WP_221071679.1;transl_table=11 NZ_AP024166.1 RefSeq gene 397354 398763 . - . ID=gene-VA249_RS16400;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=VA249_RS16400;old_locus_tag=VYA_30680 NZ_AP024166.1 Protein Homology CDS 397354 398763 . - 0 ID=cds-WP_221071680.1;Parent=gene-VA249_RS16400;Dbxref=Genbank:WP_221071680.1;Name=WP_221071680.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005887;gbkey=CDS;gene=clcA;go_component=integral component of plasma membrane|0005887||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017422642.1;locus_tag=VA249_RS16400;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_221071680.1;transl_table=11 NZ_AP024166.1 RefSeq gene 399353 399973 . + . ID=gene-VA249_RS16405;Name=VA249_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16405;old_locus_tag=VYA_30690 NZ_AP024166.1 Protein Homology CDS 399353 399973 . + 0 ID=cds-WP_225927144.1;Parent=gene-VA249_RS16405;Dbxref=Genbank:WP_225927144.1;Name=WP_225927144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697297.1;locus_tag=VA249_RS16405;product=hypothetical protein;protein_id=WP_225927144.1;transl_table=11 NZ_AP024166.1 RefSeq gene 399960 400367 . - . ID=gene-VA249_RS16410;Name=VA249_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16410;old_locus_tag=VYA_30700 NZ_AP024166.1 Protein Homology CDS 399960 400367 . - 0 ID=cds-WP_221071682.1;Parent=gene-VA249_RS16410;Dbxref=Genbank:WP_221071682.1;Name=WP_221071682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005499247.1;locus_tag=VA249_RS16410;product=helix-turn-helix domain-containing protein;protein_id=WP_221071682.1;transl_table=11 NZ_AP024166.1 RefSeq gene 400463 401371 . + . ID=gene-VA249_RS16415;Name=VA249_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16415;old_locus_tag=VYA_30710 NZ_AP024166.1 Protein Homology CDS 400463 401371 . + 0 ID=cds-WP_221071684.1;Parent=gene-VA249_RS16415;Dbxref=Genbank:WP_221071684.1;Name=WP_221071684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334187.1;locus_tag=VA249_RS16415;product=aldo/keto reductase family oxidoreductase;protein_id=WP_221071684.1;transl_table=11 NZ_AP024166.1 RefSeq gene 401650 402654 . + . ID=gene-VA249_RS16420;Name=VA249_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16420;old_locus_tag=VYA_30720 NZ_AP024166.1 Protein Homology CDS 401650 402654 . + 0 ID=cds-WP_221071691.1;Parent=gene-VA249_RS16420;Dbxref=Genbank:WP_221071691.1;Name=WP_221071691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019281663.1;locus_tag=VA249_RS16420;product=response regulator;protein_id=WP_221071691.1;transl_table=11 NZ_AP024166.1 RefSeq gene 402654 403097 . + . ID=gene-VA249_RS16425;Name=VA249_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16425;old_locus_tag=VYA_30730 NZ_AP024166.1 Protein Homology CDS 402654 403097 . + 0 ID=cds-WP_221071692.1;Parent=gene-VA249_RS16425;Dbxref=Genbank:WP_221071692.1;Name=WP_221071692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396081.1;locus_tag=VA249_RS16425;product=PAS domain-containing protein;protein_id=WP_221071692.1;transl_table=11 NZ_AP024166.1 RefSeq gene 403355 404878 . + . ID=gene-VA249_RS16430;Name=VA249_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16430;old_locus_tag=VYA_30740 NZ_AP024166.1 Protein Homology CDS 403355 404878 . + 0 ID=cds-WP_221071693.1;Parent=gene-VA249_RS16430;Dbxref=Genbank:WP_221071693.1;Name=WP_221071693.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818650.1;locus_tag=VA249_RS16430;product=NAD(P)H-hydrate dehydratase;protein_id=WP_221071693.1;transl_table=11 NZ_AP024166.1 RefSeq gene 405362 406405 . + . ID=gene-VA249_RS16435;Name=VA249_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16435;old_locus_tag=VYA_30750 NZ_AP024166.1 Protein Homology CDS 405362 406405 . + 0 ID=cds-WP_221071694.1;Parent=gene-VA249_RS16435;Dbxref=Genbank:WP_221071694.1;Name=WP_221071694.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008216394.1;locus_tag=VA249_RS16435;product=GMP reductase;protein_id=WP_221071694.1;transl_table=11 NZ_AP024166.1 RefSeq gene 406490 407743 . - . ID=gene-VA249_RS16440;Name=VA249_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16440;old_locus_tag=VYA_30760 NZ_AP024166.1 Protein Homology CDS 406490 407743 . - 0 ID=cds-WP_221071695.1;Parent=gene-VA249_RS16440;Dbxref=Genbank:WP_221071695.1;Name=WP_221071695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458812.1;locus_tag=VA249_RS16440;product=septum formation protein;protein_id=WP_221071695.1;transl_table=11 NZ_AP024166.1 RefSeq gene 408184 409011 . - . ID=gene-VA249_RS16445;Name=VA249_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16445;old_locus_tag=VYA_30770 NZ_AP024166.1 Protein Homology CDS 408184 409011 . - 0 ID=cds-WP_221071696.1;Parent=gene-VA249_RS16445;Dbxref=Genbank:WP_221071696.1;Name=WP_221071696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=VA249_RS16445;product=OmpA family protein;protein_id=WP_221071696.1;transl_table=11 NZ_AP024166.1 RefSeq gene 409028 409684 . - . ID=gene-VA249_RS16450;Name=VA249_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16450;old_locus_tag=VYA_30780 NZ_AP024166.1 Protein Homology CDS 409028 409684 . - 0 ID=cds-WP_221071697.1;Parent=gene-VA249_RS16450;Dbxref=Genbank:WP_221071697.1;Name=WP_221071697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006583.0;locus_tag=VA249_RS16450;product=flagellar motor protein;protein_id=WP_221071697.1;transl_table=11 NZ_AP024166.1 RefSeq gene 409835 413038 . - . ID=gene-VA249_RS16455;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=VA249_RS16455;old_locus_tag=VYA_30790 NZ_AP024166.1 Protein Homology CDS 409835 413038 . - 0 ID=cds-WP_221071699.1;Parent=gene-VA249_RS16455;Dbxref=Genbank:WP_221071699.1;Name=WP_221071699.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017042399.1;locus_tag=VA249_RS16455;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_221071699.1;transl_table=11 NZ_AP024166.1 RefSeq gene 413333 414094 . + . ID=gene-VA249_RS16460;Name=VA249_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16460;old_locus_tag=VYA_30810 NZ_AP024166.1 Protein Homology CDS 413333 414094 . + 0 ID=cds-WP_221071701.1;Parent=gene-VA249_RS16460;Dbxref=Genbank:WP_221071701.1;Name=WP_221071701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025736.2;locus_tag=VA249_RS16460;product=phosphatase PAP2 family protein;protein_id=WP_221071701.1;transl_table=11 NZ_AP024166.1 RefSeq gene 414306 416135 . + . ID=gene-VA249_RS16465;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=VA249_RS16465;old_locus_tag=VYA_30820 NZ_AP024166.1 Protein Homology CDS 414306 416135 . + 0 ID=cds-WP_225927145.1;Parent=gene-VA249_RS16465;Dbxref=Genbank:WP_225927145.1;Name=WP_225927145.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841014.1;locus_tag=VA249_RS16465;product=protein translocase subunit SecD;protein_id=WP_225927145.1;transl_table=11 NZ_AP024166.1 RefSeq gene 416145 417047 . + . ID=gene-VA249_RS16470;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=VA249_RS16470;old_locus_tag=VYA_30830 NZ_AP024166.1 Protein Homology CDS 416145 417047 . + 0 ID=cds-WP_221071703.1;Parent=gene-VA249_RS16470;Dbxref=Genbank:WP_221071703.1;Name=WP_221071703.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: protein motif:HMM:TIGR00966.2;locus_tag=VA249_RS16470;product=protein translocase subunit SecF;protein_id=WP_221071703.1;transl_table=11 NZ_AP024166.1 RefSeq gene 417720 419303 . - . ID=gene-VA249_RS16475;Name=VA249_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16475;old_locus_tag=VYA_30840 NZ_AP024166.1 Protein Homology CDS 417720 419303 . - 0 ID=cds-WP_221071705.1;Parent=gene-VA249_RS16475;Dbxref=Genbank:WP_221071705.1;Name=WP_221071705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596311.1;locus_tag=VA249_RS16475;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_221071705.1;transl_table=11 NZ_AP024166.1 RefSeq gene 419350 420579 . - . ID=gene-VA249_RS16480;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=VA249_RS16480;old_locus_tag=VYA_30850 NZ_AP024166.1 Protein Homology CDS 419350 420579 . - 0 ID=cds-WP_221071707.1;Parent=gene-VA249_RS16480;Dbxref=Genbank:WP_221071707.1;Name=WP_221071707.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392050.1;locus_tag=VA249_RS16480;product=sodium/glutamate symporter;protein_id=WP_221071707.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 420774 420917 . - . ID=gene-VA249_RS16485;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=pseudogene;locus_tag=VA249_RS16485;old_locus_tag=VYA_30860;partial=true;pseudo=true;start_range=.,420774 NZ_AP024166.1 Protein Homology CDS 420774 420917 . - 0 ID=cds-VA249_RS16485;Parent=gene-VA249_RS16485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015628;gbkey=CDS;gene=tatA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735565.1;locus_tag=VA249_RS16485;partial=true;product=twin-arginine translocase TatA/TatE family subunit;pseudo=true;start_range=.,420774;transl_table=11 NZ_AP024166.1 RefSeq gene 421131 421832 . - . ID=gene-VA249_RS16490;Name=VA249_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16490;old_locus_tag=VYA_30870 NZ_AP024166.1 Protein Homology CDS 421131 421832 . - 0 ID=cds-WP_221071711.1;Parent=gene-VA249_RS16490;Dbxref=Genbank:WP_221071711.1;Name=WP_221071711.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830094.1;locus_tag=VA249_RS16490;product=response regulator;protein_id=WP_221071711.1;transl_table=11 NZ_AP024166.1 RefSeq gene 421825 423360 . - . ID=gene-VA249_RS16495;Name=VA249_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16495;old_locus_tag=VYA_30880 NZ_AP024166.1 Protein Homology CDS 421825 423360 . - 0 ID=cds-WP_225927146.1;Parent=gene-VA249_RS16495;Dbxref=Genbank:WP_225927146.1;Name=WP_225927146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004394849.1;locus_tag=VA249_RS16495;product=ATP-binding protein;protein_id=WP_225927146.1;transl_table=11 NZ_AP024166.1 RefSeq gene 423715 424803 . - . ID=gene-VA249_RS16500;Name=VA249_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16500;old_locus_tag=VYA_30890 NZ_AP024166.1 Protein Homology CDS 423715 424803 . - 0 ID=cds-WP_221071712.1;Parent=gene-VA249_RS16500;Dbxref=Genbank:WP_221071712.1;Name=WP_221071712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016791210.1;locus_tag=VA249_RS16500;product=hypothetical protein;protein_id=WP_221071712.1;transl_table=11 NZ_AP024166.1 RefSeq gene 425354 425767 . - . ID=gene-VA249_RS16505;Name=VA249_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16505;old_locus_tag=VYA_30900 NZ_AP024166.1 GeneMarkS-2+ CDS 425354 425767 . - 0 ID=cds-WP_221071714.1;Parent=gene-VA249_RS16505;Dbxref=Genbank:WP_221071714.1;Name=WP_221071714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS16505;product=hypothetical protein;protein_id=WP_221071714.1;transl_table=11 NZ_AP024166.1 RefSeq gene 425837 426088 . + . ID=gene-VA249_RS16510;Name=VA249_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16510;old_locus_tag=VYA_30910 NZ_AP024166.1 Protein Homology CDS 425837 426088 . + 0 ID=cds-WP_242598085.1;Parent=gene-VA249_RS16510;Dbxref=Genbank:WP_242598085.1;Name=WP_242598085.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024770.2;locus_tag=VA249_RS16510;product=substrate-binding domain-containing protein;protein_id=WP_242598085.1;transl_table=11 NZ_AP024166.1 RefSeq gene 426344 426799 . + . ID=gene-VA249_RS16515;Name=VA249_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16515;old_locus_tag=VYA_30920 NZ_AP024166.1 Protein Homology CDS 426344 426799 . + 0 ID=cds-WP_221072209.1;Parent=gene-VA249_RS16515;Dbxref=Genbank:WP_221072209.1;Name=WP_221072209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017093576.1;locus_tag=VA249_RS16515;product=GNAT family N-acetyltransferase;protein_id=WP_221072209.1;transl_table=11 NZ_AP024166.1 RefSeq gene 426928 427470 . + . ID=gene-VA249_RS16520;Name=VA249_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16520;old_locus_tag=VYA_30930 NZ_AP024166.1 Protein Homology CDS 426928 427470 . + 0 ID=cds-WP_128812742.1;Parent=gene-VA249_RS16520;Dbxref=Genbank:WP_128812742.1;Name=WP_128812742.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015325.2;locus_tag=VA249_RS16520;product=flavodoxin family protein;protein_id=WP_128812742.1;transl_table=11 NZ_AP024166.1 RefSeq gene 427601 429781 . - . ID=gene-VA249_RS16525;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=VA249_RS16525;old_locus_tag=VYA_30940 NZ_AP024166.1 Protein Homology CDS 427601 429781 . - 0 ID=cds-WP_221071715.1;Parent=gene-VA249_RS16525;Dbxref=Genbank:WP_221071715.1;Name=WP_221071715.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705701.1;locus_tag=VA249_RS16525;product=catalase/peroxidase HPI;protein_id=WP_221071715.1;transl_table=11 NZ_AP024166.1 RefSeq gene 429978 431144 . + . ID=gene-VA249_RS16530;Name=VA249_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16530;old_locus_tag=VYA_30950 NZ_AP024166.1 Protein Homology CDS 429978 431144 . + 0 ID=cds-WP_221071716.1;Parent=gene-VA249_RS16530;Dbxref=Genbank:WP_221071716.1;Name=WP_221071716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006071414.1;locus_tag=VA249_RS16530;product=HlyD family secretion protein;protein_id=WP_221071716.1;transl_table=11 NZ_AP024166.1 RefSeq gene 431134 432135 . + . ID=gene-VA249_RS16535;Name=VA249_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16535;old_locus_tag=VYA_30960 NZ_AP024166.1 Protein Homology CDS 431134 432135 . + 0 ID=cds-WP_221071717.1;Parent=gene-VA249_RS16535;Dbxref=Genbank:WP_221071717.1;Name=WP_221071717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818019.1;locus_tag=VA249_RS16535;product=DUF2955 domain-containing protein;protein_id=WP_221071717.1;transl_table=11 NZ_AP024166.1 RefSeq gene 432256 433518 . + . ID=gene-VA249_RS16540;Name=VA249_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16540;old_locus_tag=VYA_30970 NZ_AP024166.1 Protein Homology CDS 432256 433518 . + 0 ID=cds-WP_221071718.1;Parent=gene-VA249_RS16540;Dbxref=Genbank:WP_221071718.1;Name=WP_221071718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017078901.1;locus_tag=VA249_RS16540;product=amidohydrolase family protein;protein_id=WP_221071718.1;transl_table=11 NZ_AP024166.1 RefSeq gene 433674 435104 . + . ID=gene-VA249_RS16545;Name=VA249_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16545;old_locus_tag=VYA_30980 NZ_AP024166.1 Protein Homology CDS 433674 435104 . + 0 ID=cds-WP_221071719.1;Parent=gene-VA249_RS16545;Dbxref=Genbank:WP_221071719.1;Name=WP_221071719.1;Ontology_term=GO:0019752,GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451344.1;locus_tag=VA249_RS16545;product=pyridoxal-dependent decarboxylase;protein_id=WP_221071719.1;transl_table=11 NZ_AP024166.1 RefSeq gene 435211 435372 . - . ID=gene-VA249_RS16550;Name=VA249_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16550;old_locus_tag=VYA_30990 NZ_AP024166.1 Protein Homology CDS 435211 435372 . - 0 ID=cds-WP_221071725.1;Parent=gene-VA249_RS16550;Dbxref=Genbank:WP_221071725.1;Name=WP_221071725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697120.1;locus_tag=VA249_RS16550;product=hypothetical protein;protein_id=WP_221071725.1;transl_table=11 NZ_AP024166.1 RefSeq gene 435710 436030 . - . ID=gene-VA249_RS16555;Name=VA249_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16555;old_locus_tag=VYA_31000 NZ_AP024166.1 Protein Homology CDS 435710 436030 . - 0 ID=cds-WP_128812748.1;Parent=gene-VA249_RS16555;Dbxref=Genbank:WP_128812748.1;Name=WP_128812748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425905.1;locus_tag=VA249_RS16555;product=hypothetical protein;protein_id=WP_128812748.1;transl_table=11 NZ_AP024166.1 RefSeq gene 436516 437115 . + . ID=gene-VA249_RS16560;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=VA249_RS16560;old_locus_tag=VYA_31010 NZ_AP024166.1 Protein Homology CDS 436516 437115 . + 0 ID=cds-WP_221071727.1;Parent=gene-VA249_RS16560;Dbxref=Genbank:WP_221071727.1;Name=WP_221071727.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195982.1;locus_tag=VA249_RS16560;product=transcriptional regulator BetI;protein_id=WP_221071727.1;transl_table=11 NZ_AP024166.1 RefSeq gene 437132 438592 . + . ID=gene-VA249_RS16565;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=VA249_RS16565;old_locus_tag=VYA_31020 NZ_AP024166.1 Protein Homology CDS 437132 438592 . + 0 ID=cds-WP_221071729.1;Parent=gene-VA249_RS16565;Dbxref=Genbank:WP_221071729.1;Name=WP_221071729.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647106.1;locus_tag=VA249_RS16565;product=betaine-aldehyde dehydrogenase;protein_id=WP_221071729.1;transl_table=11 NZ_AP024166.1 RefSeq gene 438612 440321 . + . ID=gene-VA249_RS16570;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=VA249_RS16570;old_locus_tag=VYA_31030 NZ_AP024166.1 Protein Homology CDS 438612 440321 . + 0 ID=cds-WP_221071731.1;Parent=gene-VA249_RS16570;Dbxref=Genbank:WP_221071731.1;Name=WP_221071731.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129668.1;locus_tag=VA249_RS16570;product=choline dehydrogenase;protein_id=WP_221071731.1;transl_table=11 NZ_AP024166.1 RefSeq gene 440364 441302 . + . ID=gene-VA249_RS16575;Name=VA249_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16575;old_locus_tag=VYA_31040 NZ_AP024166.1 Protein Homology CDS 440364 441302 . + 0 ID=cds-WP_038880762.1;Parent=gene-VA249_RS16575;Dbxref=Genbank:WP_038880762.1;Name=WP_038880762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647103.1;locus_tag=VA249_RS16575;product=choline ABC transporter substrate-binding protein;protein_id=WP_038880762.1;transl_table=11 NZ_AP024166.1 RefSeq gene 441365 442207 . + . ID=gene-VA249_RS16580;Name=choW;gbkey=Gene;gene=choW;gene_biotype=protein_coding;locus_tag=VA249_RS16580;old_locus_tag=VYA_31050 NZ_AP024166.1 Protein Homology CDS 441365 442207 . + 0 ID=cds-WP_221071733.1;Parent=gene-VA249_RS16580;Dbxref=Genbank:WP_221071733.1;Name=WP_221071733.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=choW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006070265.1;locus_tag=VA249_RS16580;product=choline ABC transporter permease subunit;protein_id=WP_221071733.1;transl_table=11 NZ_AP024166.1 RefSeq gene 442209 443393 . + . ID=gene-VA249_RS16585;Name=choV;gbkey=Gene;gene=choV;gene_biotype=protein_coding;locus_tag=VA249_RS16585;old_locus_tag=VYA_31060 NZ_AP024166.1 Protein Homology CDS 442209 443393 . + 0 ID=cds-WP_221071735.1;Parent=gene-VA249_RS16585;Dbxref=Genbank:WP_221071735.1;Name=WP_221071735.1;Ontology_term=GO:0015871,GO:0015220,GO:0055052;gbkey=CDS;gene=choV;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=choline transmembrane transporter activity|0015220||IEA;go_process=choline transport|0015871||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704089.1;locus_tag=VA249_RS16585;product=choline ABC transporter ATP-binding protein;protein_id=WP_221071735.1;transl_table=11 NZ_AP024166.1 RefSeq gene 443571 444227 . - . ID=gene-VA249_RS16590;Name=VA249_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16590;old_locus_tag=VYA_31070 NZ_AP024166.1 Protein Homology CDS 443571 444227 . - 0 ID=cds-WP_005452292.1;Parent=gene-VA249_RS16590;Dbxref=Genbank:WP_005452292.1;Name=WP_005452292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017630330.1;locus_tag=VA249_RS16590;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_005452292.1;transl_table=11 NZ_AP024166.1 RefSeq gene 444551 445333 . - . ID=gene-VA249_RS16595;Name=VA249_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16595;old_locus_tag=VYA_31080 NZ_AP024166.1 Protein Homology CDS 444551 445333 . - 0 ID=cds-WP_221071736.1;Parent=gene-VA249_RS16595;Dbxref=Genbank:WP_221071736.1;Name=WP_221071736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697112.1;locus_tag=VA249_RS16595;product=slipin family protein;protein_id=WP_221071736.1;transl_table=11 NZ_AP024166.1 RefSeq gene 445343 446725 . - . ID=gene-VA249_RS16600;Name=VA249_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16600;old_locus_tag=VYA_31090 NZ_AP024166.1 Protein Homology CDS 445343 446725 . - 0 ID=cds-WP_221071739.1;Parent=gene-VA249_RS16600;Dbxref=Genbank:WP_221071739.1;Name=WP_221071739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425957.1;locus_tag=VA249_RS16600;product=nodulation protein NfeD;protein_id=WP_221071739.1;transl_table=11 NZ_AP024166.1 RefSeq gene 447377 449065 . - . ID=gene-VA249_RS16605;Name=VA249_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16605;old_locus_tag=VYA_31110 NZ_AP024166.1 Protein Homology CDS 447377 449065 . - 0 ID=cds-WP_221071748.1;Parent=gene-VA249_RS16605;Dbxref=Genbank:WP_221071748.1;Name=WP_221071748.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195972.1;locus_tag=VA249_RS16605;product=response regulator;protein_id=WP_221071748.1;transl_table=11 NZ_AP024166.1 RefSeq gene 449115 450260 . - . ID=gene-VA249_RS16610;Name=VA249_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16610;old_locus_tag=VYA_31120 NZ_AP024166.1 Protein Homology CDS 449115 450260 . - 0 ID=cds-WP_221071750.1;Parent=gene-VA249_RS16610;Dbxref=Genbank:WP_221071750.1;Name=WP_221071750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530556.1;locus_tag=VA249_RS16610;product=EAL domain-containing response regulator;protein_id=WP_221071750.1;transl_table=11 NZ_AP024166.1 RefSeq gene 450261 453743 . - . ID=gene-VA249_RS16615;Name=VA249_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16615;old_locus_tag=VYA_31130 NZ_AP024166.1 Protein Homology CDS 450261 453743 . - 0 ID=cds-WP_225927147.1;Parent=gene-VA249_RS16615;Dbxref=Genbank:WP_225927147.1;Name=WP_225927147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195970.1;locus_tag=VA249_RS16615;product=transporter substrate-binding domain-containing protein;protein_id=WP_225927147.1;transl_table=11 NZ_AP024166.1 RefSeq gene 454057 454527 . + . ID=gene-VA249_RS16620;Name=VA249_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16620;old_locus_tag=VYA_31140 NZ_AP024166.1 Protein Homology CDS 454057 454527 . + 0 ID=cds-WP_221071755.1;Parent=gene-VA249_RS16620;Dbxref=Genbank:WP_221071755.1;Name=WP_221071755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392541.1;locus_tag=VA249_RS16620;product=OsmC family protein;protein_id=WP_221071755.1;transl_table=11 NZ_AP024166.1 RefSeq gene 454731 455750 . + . ID=gene-VA249_RS16625;Name=VA249_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16625;old_locus_tag=VYA_31150 NZ_AP024166.1 Protein Homology CDS 454731 455750 . + 0 ID=cds-WP_221071757.1;Parent=gene-VA249_RS16625;Dbxref=Genbank:WP_221071757.1;Name=WP_221071757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530568.1;locus_tag=VA249_RS16625;product=DUF2804 family protein;protein_id=WP_221071757.1;transl_table=11 NZ_AP024166.1 RefSeq gene 455759 456613 . + . ID=gene-VA249_RS16630;Name=VA249_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16630 NZ_AP024166.1 Protein Homology CDS 455759 456613 . + 0 ID=cds-WP_221071758.1;Parent=gene-VA249_RS16630;Dbxref=Genbank:WP_221071758.1;Name=WP_221071758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452272.1;locus_tag=VA249_RS16630;product=sterol desaturase family protein;protein_id=WP_221071758.1;transl_table=11 NZ_AP024166.1 RefSeq gene 457033 457845 . + . ID=gene-VA249_RS16635;Name=VA249_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16635;old_locus_tag=VYA_31170 NZ_AP024166.1 GeneMarkS-2+ CDS 457033 457845 . + 0 ID=cds-WP_221071760.1;Parent=gene-VA249_RS16635;Dbxref=Genbank:WP_221071760.1;Name=WP_221071760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS16635;product=RbmA protein;protein_id=WP_221071760.1;transl_table=11 NZ_AP024166.1 RefSeq gene 457913 459043 . - . ID=gene-VA249_RS16640;Name=VA249_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16640;old_locus_tag=VYA_31180 NZ_AP024166.1 Protein Homology CDS 457913 459043 . - 0 ID=cds-WP_221071762.1;Parent=gene-VA249_RS16640;Dbxref=Genbank:WP_221071762.1;Name=WP_221071762.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024120.2;locus_tag=VA249_RS16640;product=hypothetical protein;protein_id=WP_221071762.1;transl_table=11 NZ_AP024166.1 RefSeq gene 459121 459570 . - . ID=gene-VA249_RS16645;Name=VA249_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16645 NZ_AP024166.1 Protein Homology CDS 459121 459570 . - 0 ID=cds-WP_221071763.1;Parent=gene-VA249_RS16645;Dbxref=Genbank:WP_221071763.1;Name=WP_221071763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004728287.1;locus_tag=VA249_RS16645;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_221071763.1;transl_table=11 NZ_AP024166.1 RefSeq gene 460144 461100 . - . ID=gene-VA249_RS16650;Name=VA249_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16650;old_locus_tag=VYA_31190 NZ_AP024166.1 Protein Homology CDS 460144 461100 . - 0 ID=cds-WP_221071764.1;Parent=gene-VA249_RS16650;Dbxref=Genbank:WP_221071764.1;Name=WP_221071764.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=VA249_RS16650;product=acyltransferase family protein;protein_id=WP_221071764.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 461177 461752 . - . ID=gene-VA249_RS24130;Name=VA249_RS24130;end_range=461752,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24130;partial=true;pseudo=true;start_range=.,461177 NZ_AP024166.1 Protein Homology CDS 461177 461752 . - 0 ID=cds-VA249_RS24130;Parent=gene-VA249_RS24130;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=461752,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611746.1;locus_tag=VA249_RS24130;partial=true;product=transposase;pseudo=true;start_range=.,461177;transl_table=11 NZ_AP024166.1 RefSeq gene 462042 464213 . - . ID=gene-VA249_RS16660;Name=VA249_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16660;old_locus_tag=VYA_31210 NZ_AP024166.1 Protein Homology CDS 462042 464213 . - 0 ID=cds-WP_221071766.1;Parent=gene-VA249_RS16660;Dbxref=Genbank:WP_221071766.1;Name=WP_221071766.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04215.1;locus_tag=VA249_RS16660;product=choice-of-anchor A family protein;protein_id=WP_221071766.1;transl_table=11 NZ_AP024166.1 RefSeq gene 464307 465041 . - . ID=gene-VA249_RS16665;Name=VA249_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16665;old_locus_tag=VYA_31220 NZ_AP024166.1 Protein Homology CDS 464307 465041 . - 0 ID=cds-WP_211917570.1;Parent=gene-VA249_RS16665;Dbxref=Genbank:WP_211917570.1;Name=WP_211917570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017053504.1;locus_tag=VA249_RS16665;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=WP_211917570.1;transl_table=11 NZ_AP024166.1 RefSeq gene 465028 466212 . - . ID=gene-VA249_RS16670;Name=VA249_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16670;old_locus_tag=VYA_31230 NZ_AP024166.1 Protein Homology CDS 465028 466212 . - 0 ID=cds-WP_221071767.1;Parent=gene-VA249_RS16670;Dbxref=Genbank:WP_221071767.1;Name=WP_221071767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002539614.1;locus_tag=VA249_RS16670;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_221071767.1;transl_table=11 NZ_AP024166.1 RefSeq gene 466212 467285 . - . ID=gene-VA249_RS16675;Name=VA249_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16675;old_locus_tag=VYA_31240 NZ_AP024166.1 Protein Homology CDS 466212 467285 . - 0 ID=cds-WP_221071768.1;Parent=gene-VA249_RS16675;Dbxref=Genbank:WP_221071768.1;Name=WP_221071768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002539613.1;locus_tag=VA249_RS16675;product=glycosyltransferase family 4 protein;protein_id=WP_221071768.1;transl_table=11 NZ_AP024166.1 RefSeq gene 467285 468625 . - . ID=gene-VA249_RS16680;Name=VA249_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16680;old_locus_tag=VYA_31250 NZ_AP024166.1 Protein Homology CDS 467285 468625 . - 0 ID=cds-WP_221071769.1;Parent=gene-VA249_RS16680;Dbxref=Genbank:WP_221071769.1;Name=WP_221071769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000495305.1;locus_tag=VA249_RS16680;product=phenylacetate--CoA ligase family protein;protein_id=WP_221071769.1;transl_table=11 NZ_AP024166.1 RefSeq gene 468625 469128 . - . ID=gene-VA249_RS16685;Name=VA249_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16685;old_locus_tag=VYA_31260 NZ_AP024166.1 Protein Homology CDS 468625 469128 . - 0 ID=cds-WP_221071771.1;Parent=gene-VA249_RS16685;Dbxref=Genbank:WP_221071771.1;Name=WP_221071771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006960413.1;locus_tag=VA249_RS16685;product=serine acetyltransferase;protein_id=WP_221071771.1;transl_table=11 NZ_AP024166.1 RefSeq gene 469162 470364 . - . ID=gene-VA249_RS16690;Name=VA249_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16690;old_locus_tag=VYA_31270 NZ_AP024166.1 Protein Homology CDS 469162 470364 . - 0 ID=cds-WP_221071773.1;Parent=gene-VA249_RS16690;Dbxref=Genbank:WP_221071773.1;Name=WP_221071773.1;Note=VpsF%2C distantly related to oligosaccharide ligases%2C is encoded next to the probable flippase VpsE.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001913988.1;locus_tag=VA249_RS16690;product=VpsF family polysaccharide biosynthesis protein;protein_id=WP_221071773.1;transl_table=11 NZ_AP024166.1 RefSeq gene 470357 471787 . - . ID=gene-VA249_RS16695;Name=VA249_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16695;old_locus_tag=VYA_31280 NZ_AP024166.1 Protein Homology CDS 470357 471787 . - 0 ID=cds-WP_221071775.1;Parent=gene-VA249_RS16695;Dbxref=Genbank:WP_221071775.1;Name=WP_221071775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=VA249_RS16695;product=oligosaccharide flippase family protein;protein_id=WP_221071775.1;transl_table=11 NZ_AP024166.1 RefSeq gene 471780 472925 . - . ID=gene-VA249_RS16700;Name=VA249_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16700;old_locus_tag=VYA_31290 NZ_AP024166.1 Protein Homology CDS 471780 472925 . - 0 ID=cds-WP_221071777.1;Parent=gene-VA249_RS16700;Dbxref=Genbank:WP_221071777.1;Name=WP_221071777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038255.1;locus_tag=VA249_RS16700;product=VpsD family glycosyltransferase;protein_id=WP_221071777.1;transl_table=11 NZ_AP024166.1 RefSeq gene 472998 474236 . - . ID=gene-VA249_RS16705;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=VA249_RS16705;old_locus_tag=VYA_31300 NZ_AP024166.1 Protein Homology CDS 472998 474236 . - 0 ID=cds-WP_221071779.1;Parent=gene-VA249_RS16705;Dbxref=Genbank:WP_221071779.1;Name=WP_221071779.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005470068.1;locus_tag=VA249_RS16705;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_221071779.1;transl_table=11 NZ_AP024166.1 RefSeq gene 474410 475546 . - . ID=gene-VA249_RS16710;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=VA249_RS16710;old_locus_tag=VYA_31310 NZ_AP024166.1 Protein Homology CDS 474410 475546 . - 0 ID=cds-WP_221071781.1;Parent=gene-VA249_RS16710;Dbxref=Genbank:WP_221071781.1;Name=WP_221071781.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002539598.1;locus_tag=VA249_RS16710;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_221071781.1;transl_table=11 NZ_AP024166.1 RefSeq gene 475556 477778 . - . ID=gene-VA249_RS16715;Name=VA249_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16715;old_locus_tag=VYA_31320 NZ_AP024166.1 Protein Homology CDS 475556 477778 . - 0 ID=cds-WP_225927148.1;Parent=gene-VA249_RS16715;Dbxref=Genbank:WP_225927148.1;Name=WP_225927148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004748214.1;locus_tag=VA249_RS16715;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_225927148.1;transl_table=11 NZ_AP024166.1 RefSeq gene 477810 478343 . - . ID=gene-VA249_RS16720;Name=VA249_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16720;old_locus_tag=VYA_31330 NZ_AP024166.1 Protein Homology CDS 477810 478343 . - 0 ID=cds-WP_221071782.1;Parent=gene-VA249_RS16720;Dbxref=Genbank:WP_221071782.1;Name=WP_221071782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005470019.1;locus_tag=VA249_RS16720;product=polysaccharide export protein;protein_id=WP_221071782.1;transl_table=11 NZ_AP024166.1 RefSeq gene 478367 479599 . - . ID=gene-VA249_RS16725;Name=VA249_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16725;old_locus_tag=VYA_31340 NZ_AP024166.1 Protein Homology CDS 478367 479599 . - 0 ID=cds-WP_221071785.1;Parent=gene-VA249_RS16725;Dbxref=Genbank:WP_221071785.1;Name=WP_221071785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002539592.1;locus_tag=VA249_RS16725;product=outer membrane beta-barrel protein;protein_id=WP_221071785.1;transl_table=11 NZ_AP024166.1 RefSeq gene 479610 481013 . - . ID=gene-VA249_RS16730;Name=VA249_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16730;old_locus_tag=VYA_31350 NZ_AP024166.1 Protein Homology CDS 479610 481013 . - 0 ID=cds-WP_221071787.1;Parent=gene-VA249_RS16730;Dbxref=Genbank:WP_221071787.1;Name=WP_221071787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005502265.1;locus_tag=VA249_RS16730;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_221071787.1;transl_table=11 NZ_AP024166.1 RefSeq gene 482143 482217 . - . ID=gene-VA249_RS16735;Name=VA249_RS16735;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS16735;old_locus_tag=VYA_t01260 NZ_AP024166.1 tRNAscan-SE tRNA 482143 482217 . - . ID=rna-VA249_RS16735;Parent=gene-VA249_RS16735;anticodon=(pos:complement(482182..482184));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS16735;product=tRNA-Gly NZ_AP024166.1 tRNAscan-SE exon 482143 482217 . - . ID=exon-VA249_RS16735-1;Parent=rna-VA249_RS16735;anticodon=(pos:complement(482182..482184));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS16735;product=tRNA-Gly NZ_AP024166.1 RefSeq gene 482500 483018 . + . ID=gene-VA249_RS16740;Name=VA249_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16740;old_locus_tag=VYA_31360 NZ_AP024166.1 Protein Homology CDS 482500 483018 . + 0 ID=cds-WP_221071789.1;Parent=gene-VA249_RS16740;Dbxref=Genbank:WP_221071789.1;Name=WP_221071789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397138.1;locus_tag=VA249_RS16740;product=DUF4136 domain-containing protein;protein_id=WP_221071789.1;transl_table=11 NZ_AP024166.1 RefSeq gene 483268 483672 . + . ID=gene-VA249_RS16745;Name=VA249_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16745;old_locus_tag=VYA_31370 NZ_AP024166.1 GeneMarkS-2+ CDS 483268 483672 . + 0 ID=cds-WP_221071791.1;Parent=gene-VA249_RS16745;Dbxref=Genbank:WP_221071791.1;Name=WP_221071791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS16745;product=hypothetical protein;protein_id=WP_221071791.1;transl_table=11 NZ_AP024166.1 RefSeq gene 483723 484403 . + . ID=gene-VA249_RS16750;Name=VA249_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16750;old_locus_tag=VYA_31380 NZ_AP024166.1 Protein Homology CDS 483723 484403 . + 0 ID=cds-WP_211917539.1;Parent=gene-VA249_RS16750;Dbxref=Genbank:WP_211917539.1;Name=WP_211917539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452407.1;locus_tag=VA249_RS16750;product=DedA family protein;protein_id=WP_211917539.1;transl_table=11 NZ_AP024166.1 RefSeq gene 484479 485120 . - . ID=gene-VA249_RS16755;Name=VA249_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16755;old_locus_tag=VYA_31390 NZ_AP024166.1 Protein Homology CDS 484479 485120 . - 0 ID=cds-WP_221072213.1;Parent=gene-VA249_RS16755;Dbxref=Genbank:WP_221072213.1;Name=WP_221072213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452264.1;locus_tag=VA249_RS16755;product=murein L%2CD-transpeptidase catalytic domain family protein;protein_id=WP_221072213.1;transl_table=11 NZ_AP024166.1 RefSeq gene 486274 486972 . + . ID=gene-VA249_RS16760;Name=VA249_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16760;old_locus_tag=VYA_31400 NZ_AP024166.1 Protein Homology CDS 486274 486972 . + 0 ID=cds-WP_221071793.1;Parent=gene-VA249_RS16760;Dbxref=Genbank:WP_221071793.1;Name=WP_221071793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011263461.1;locus_tag=VA249_RS16760;product=aspartate/glutamate racemase family protein;protein_id=WP_221071793.1;transl_table=11 NZ_AP024166.1 RefSeq gene 487001 487174 . + . ID=gene-VA249_RS16765;Name=VA249_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16765;old_locus_tag=VYA_31410 NZ_AP024166.1 Protein Homology CDS 487001 487174 . + 0 ID=cds-WP_221071794.1;Parent=gene-VA249_RS16765;Dbxref=Genbank:WP_221071794.1;Name=WP_221071794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011106418.1;locus_tag=VA249_RS16765;product=hypothetical protein;protein_id=WP_221071794.1;transl_table=11 NZ_AP024166.1 RefSeq gene 487310 488068 . + . ID=gene-VA249_RS16770;Name=VA249_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16770;old_locus_tag=VYA_31420 NZ_AP024166.1 Protein Homology CDS 487310 488068 . + 0 ID=cds-WP_221071796.1;Parent=gene-VA249_RS16770;Dbxref=Genbank:WP_221071796.1;Name=WP_221071796.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313347.1;locus_tag=VA249_RS16770;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_221071796.1;transl_table=11 NZ_AP024166.1 RefSeq gene 488170 490509 . - . ID=gene-VA249_RS16775;Name=VA249_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16775;old_locus_tag=VYA_31430 NZ_AP024166.1 Protein Homology CDS 488170 490509 . - 0 ID=cds-WP_221071798.1;Parent=gene-VA249_RS16775;Dbxref=Genbank:WP_221071798.1;Name=WP_221071798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530585.1;locus_tag=VA249_RS16775;product=EAL domain-containing protein;protein_id=WP_221071798.1;transl_table=11 NZ_AP024166.1 RefSeq gene 491013 491432 . + . ID=gene-VA249_RS16780;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=VA249_RS16780;old_locus_tag=VYA_31440 NZ_AP024166.1 Protein Homology CDS 491013 491432 . + 0 ID=cds-WP_221071801.1;Parent=gene-VA249_RS16780;Dbxref=Genbank:WP_221071801.1;Name=WP_221071801.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530588.1;locus_tag=VA249_RS16780;product=D-ribose pyranase;protein_id=WP_221071801.1;transl_table=11 NZ_AP024166.1 RefSeq gene 491477 492799 . + . ID=gene-VA249_RS16785;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=VA249_RS16785;old_locus_tag=VYA_31450 NZ_AP024166.1 Protein Homology CDS 491477 492799 . + 0 ID=cds-WP_221071802.1;Parent=gene-VA249_RS16785;Dbxref=Genbank:WP_221071802.1;Name=WP_221071802.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595342.1;locus_tag=VA249_RS16785;product=L-fucose:H+ symporter permease;protein_id=WP_221071802.1;transl_table=11 NZ_AP024166.1 RefSeq gene 492851 493867 . + . ID=gene-VA249_RS16790;Name=VA249_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16790;old_locus_tag=VYA_31460 NZ_AP024166.1 Protein Homology CDS 492851 493867 . + 0 ID=cds-WP_225927149.1;Parent=gene-VA249_RS16790;Dbxref=Genbank:WP_225927149.1;Name=WP_225927149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245959.1;locus_tag=VA249_RS16790;product=DUF4432 family protein;protein_id=WP_225927149.1;transl_table=11 NZ_AP024166.1 RefSeq gene 494057 494995 . + . ID=gene-VA249_RS16795;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=VA249_RS16795;old_locus_tag=VYA_31470 NZ_AP024166.1 Protein Homology CDS 494057 494995 . + 0 ID=cds-WP_221071804.1;Parent=gene-VA249_RS16795;Dbxref=Genbank:WP_221071804.1;Name=WP_221071804.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435750.1;locus_tag=VA249_RS16795;product=ribokinase;protein_id=WP_221071804.1;transl_table=11 NZ_AP024166.1 RefSeq gene 495013 496017 . + . ID=gene-VA249_RS16800;Name=VA249_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16800;old_locus_tag=VYA_31480 NZ_AP024166.1 Protein Homology CDS 495013 496017 . + 0 ID=cds-WP_221071806.1;Parent=gene-VA249_RS16800;Dbxref=Genbank:WP_221071806.1;Name=WP_221071806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012603614.1;locus_tag=VA249_RS16800;product=substrate-binding domain-containing protein;protein_id=WP_221071806.1;transl_table=11 NZ_AP024166.1 RefSeq gene 496175 496330 . - . ID=gene-VA249_RS16805;Name=VA249_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16805;old_locus_tag=VYA_31490 NZ_AP024166.1 Protein Homology CDS 496175 496330 . - 0 ID=cds-WP_128812781.1;Parent=gene-VA249_RS16805;Dbxref=Genbank:WP_128812781.1;Name=WP_128812781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016795827.1;locus_tag=VA249_RS16805;product=DUF3012 domain-containing protein;protein_id=WP_128812781.1;transl_table=11 NZ_AP024166.1 RefSeq gene 496456 496842 . - . ID=gene-VA249_RS16810;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=VA249_RS16810;old_locus_tag=VYA_31500 NZ_AP024166.1 Protein Homology CDS 496456 496842 . - 0 ID=cds-WP_128812782.1;Parent=gene-VA249_RS16810;Dbxref=Genbank:WP_128812782.1;Name=WP_128812782.1;Ontology_term=GO:0006355,GO:0006878,GO:0003700;gbkey=CDS;gene=cueR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530611.1;locus_tag=VA249_RS16810;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_128812782.1;transl_table=11 NZ_AP024166.1 RefSeq gene 497179 497427 . - . ID=gene-VA249_RS16815;Name=VA249_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16815;old_locus_tag=VYA_31510 NZ_AP024166.1 Protein Homology CDS 497179 497427 . - 0 ID=cds-WP_128812783.1;Parent=gene-VA249_RS16815;Dbxref=Genbank:WP_128812783.1;Name=WP_128812783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011081099.1;locus_tag=VA249_RS16815;product=YgjV family protein;protein_id=WP_128812783.1;transl_table=11 NZ_AP024166.1 RefSeq gene 498332 514663 . + . ID=gene-VA249_RS16820;Name=VA249_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16820;old_locus_tag=VYA_31520 NZ_AP024166.1 Protein Homology CDS 498332 514663 . + 0 ID=cds-WP_221071809.1;Parent=gene-VA249_RS16820;Dbxref=Genbank:WP_221071809.1;Name=WP_221071809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005486252.1;locus_tag=VA249_RS16820;product=retention module-containing protein;protein_id=WP_221071809.1;transl_table=11 NZ_AP024166.1 RefSeq gene 514952 515113 . - . ID=gene-VA249_RS16825;Name=VA249_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16825;old_locus_tag=VYA_31530 NZ_AP024166.1 Protein Homology CDS 514952 515113 . - 0 ID=cds-WP_221071810.1;Parent=gene-VA249_RS16825;Dbxref=Genbank:WP_221071810.1;Name=WP_221071810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431757.1;locus_tag=VA249_RS16825;product=hypothetical protein;protein_id=WP_221071810.1;transl_table=11 NZ_AP024166.1 RefSeq gene 515367 517520 . - . ID=gene-VA249_RS16830;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=VA249_RS16830;old_locus_tag=VYA_31540 NZ_AP024166.1 Protein Homology CDS 515367 517520 . - 0 ID=cds-WP_221072217.1;Parent=gene-VA249_RS16830;Dbxref=Genbank:WP_221072217.1;Name=WP_221072217.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454352.1;locus_tag=VA249_RS16830;product=YccS family putative transporter;protein_id=WP_221072217.1;transl_table=11 NZ_AP024166.1 RefSeq gene 517895 519964 . + . ID=gene-VA249_RS16835;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=VA249_RS16835;old_locus_tag=VYA_31550 NZ_AP024166.1 Protein Homology CDS 517895 519964 . + 0 ID=cds-WP_221071811.1;Parent=gene-VA249_RS16835;Dbxref=Genbank:WP_221071811.1;Name=WP_221071811.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704157.1;locus_tag=VA249_RS16835;product=DNA helicase IV;protein_id=WP_221071811.1;transl_table=11 NZ_AP024166.1 RefSeq gene 520037 520492 . - . ID=gene-VA249_RS16840;Name=VA249_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16840;old_locus_tag=VYA_31560 NZ_AP024166.1 Protein Homology CDS 520037 520492 . - 0 ID=cds-WP_128812785.1;Parent=gene-VA249_RS16840;Dbxref=Genbank:WP_128812785.1;Name=WP_128812785.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017105060.1;locus_tag=VA249_RS16840;product=methylglyoxal synthase;protein_id=WP_128812785.1;transl_table=11 NZ_AP024166.1 RefSeq gene 520608 521612 . - . ID=gene-VA249_RS16845;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=VA249_RS16845;old_locus_tag=VYA_31570 NZ_AP024166.1 Protein Homology CDS 520608 521612 . - 0 ID=cds-WP_211917513.1;Parent=gene-VA249_RS16845;Dbxref=Genbank:WP_211917513.1;Name=WP_211917513.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431808.1;locus_tag=VA249_RS16845;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_211917513.1;transl_table=11 NZ_AP024166.1 RefSeq gene 521701 524697 . + . ID=gene-VA249_RS16850;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=VA249_RS16850;old_locus_tag=VYA_31580 NZ_AP024166.1 Protein Homology CDS 521701 524697 . + 0 ID=cds-WP_221071813.1;Parent=gene-VA249_RS16850;Dbxref=Genbank:WP_221071813.1;Name=WP_221071813.1;Ontology_term=GO:0000160,GO:0000156,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;gene=torS;go_component=membrane|0016020||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447216.1;locus_tag=VA249_RS16850;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_221071813.1;transl_table=11 NZ_AP024166.1 RefSeq gene 524832 525023 . - . ID=gene-VA249_RS16855;Name=VA249_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16855;old_locus_tag=VYA_31590 NZ_AP024166.1 Protein Homology CDS 524832 525023 . - 0 ID=cds-WP_128812788.1;Parent=gene-VA249_RS16855;Dbxref=Genbank:WP_128812788.1;Name=WP_128812788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647052.1;locus_tag=VA249_RS16855;product=hypothetical protein;protein_id=WP_128812788.1;transl_table=11 NZ_AP024166.1 RefSeq gene 525043 527397 . - . ID=gene-VA249_RS16860;Name=VA249_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16860;old_locus_tag=VYA_31600 NZ_AP024166.1 Protein Homology CDS 525043 527397 . - 0 ID=cds-WP_221071815.1;Parent=gene-VA249_RS16860;Dbxref=Genbank:WP_221071815.1;Name=WP_221071815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188886.1;locus_tag=VA249_RS16860;product=fatty acid cis/trans isomerase;protein_id=WP_221071815.1;transl_table=11 NZ_AP024166.1 RefSeq gene 527593 529029 . + . ID=gene-VA249_RS16865;Name=VA249_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16865;old_locus_tag=VYA_31610 NZ_AP024166.1 Protein Homology CDS 527593 529029 . + 0 ID=cds-WP_221067583.1-16;Parent=gene-VA249_RS16865;Dbxref=Genbank:WP_221067583.1;Name=WP_221067583.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017428762.1;locus_tag=VA249_RS16865;product=IS1182 family transposase;protein_id=WP_221067583.1;transl_table=11 NZ_AP024166.1 RefSeq gene 529154 530719 . - . ID=gene-VA249_RS16870;Name=VA249_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16870;old_locus_tag=VYA_31620 NZ_AP024166.1 Protein Homology CDS 529154 530719 . - 0 ID=cds-WP_221071817.1;Parent=gene-VA249_RS16870;Dbxref=Genbank:WP_221071817.1;Name=WP_221071817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819206.1;locus_tag=VA249_RS16870;product=arylsulfatase;protein_id=WP_221071817.1;transl_table=11 NZ_AP024166.1 RefSeq gene 531062 532609 . + . ID=gene-VA249_RS16875;Name=VA249_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16875;old_locus_tag=VYA_31630 NZ_AP024166.1 Protein Homology CDS 531062 532609 . + 0 ID=cds-WP_221071818.1;Parent=gene-VA249_RS16875;Dbxref=Genbank:WP_221071818.1;Name=WP_221071818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448130.1;locus_tag=VA249_RS16875;product=arylsulfatase;protein_id=WP_221071818.1;transl_table=11 NZ_AP024166.1 RefSeq gene 532760 535084 . + . ID=gene-VA249_RS16880;Name=VA249_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16880;old_locus_tag=VYA_31640 NZ_AP024166.1 Protein Homology CDS 532760 535084 . + 0 ID=cds-WP_221071819.1;Parent=gene-VA249_RS16880;Dbxref=Genbank:WP_221071819.1;Name=WP_221071819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005454191.1;locus_tag=VA249_RS16880;product=tetratricopeptide repeat protein;protein_id=WP_221071819.1;transl_table=11 NZ_AP024166.1 RefSeq gene 535209 536192 . + . ID=gene-VA249_RS16885;Name=VA249_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16885;old_locus_tag=VYA_31650 NZ_AP024166.1 Protein Homology CDS 535209 536192 . + 0 ID=cds-WP_221071820.1;Parent=gene-VA249_RS16885;Dbxref=Genbank:WP_221071820.1;Name=WP_221071820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019825004.1;locus_tag=VA249_RS16885;product=MoxR family ATPase;protein_id=WP_221071820.1;transl_table=11 NZ_AP024166.1 RefSeq gene 536205 537167 . + . ID=gene-VA249_RS16890;Name=VA249_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16890;old_locus_tag=VYA_31660 NZ_AP024166.1 Protein Homology CDS 536205 537167 . + 0 ID=cds-WP_221071821.1;Parent=gene-VA249_RS16890;Dbxref=Genbank:WP_221071821.1;Name=WP_221071821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088119.1;locus_tag=VA249_RS16890;product=DUF58 domain-containing protein;protein_id=WP_221071821.1;transl_table=11 NZ_AP024166.1 RefSeq gene 537168 537719 . + . ID=gene-VA249_RS16895;Name=VA249_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16895;old_locus_tag=VYA_31670 NZ_AP024166.1 Protein Homology CDS 537168 537719 . + 0 ID=cds-WP_221071822.1;Parent=gene-VA249_RS16895;Dbxref=Genbank:WP_221071822.1;Name=WP_221071822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188893.1;locus_tag=VA249_RS16895;product=DUF4381 family protein;protein_id=WP_221071822.1;transl_table=11 NZ_AP024166.1 RefSeq gene 537712 538803 . + . ID=gene-VA249_RS16900;Name=VA249_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16900;old_locus_tag=VYA_31680 NZ_AP024166.1 Protein Homology CDS 537712 538803 . + 0 ID=cds-WP_221071823.1;Parent=gene-VA249_RS16900;Dbxref=Genbank:WP_221071823.1;Name=WP_221071823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697246.1;locus_tag=VA249_RS16900;product=VWA domain-containing protein;protein_id=WP_221071823.1;transl_table=11 NZ_AP024166.1 RefSeq gene 538796 540535 . + . ID=gene-VA249_RS16905;Name=VA249_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16905;old_locus_tag=VYA_31690 NZ_AP024166.1 Protein Homology CDS 538796 540535 . + 0 ID=cds-WP_221071824.1;Parent=gene-VA249_RS16905;Dbxref=Genbank:WP_221071824.1;Name=WP_221071824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697245.1;locus_tag=VA249_RS16905;product=VWA domain-containing protein;protein_id=WP_221071824.1;transl_table=11 NZ_AP024166.1 RefSeq gene 540532 541851 . + . ID=gene-VA249_RS16910;Name=VA249_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16910;old_locus_tag=VYA_31700 NZ_AP024166.1 Protein Homology CDS 540532 541851 . + 0 ID=cds-WP_221071825.1;Parent=gene-VA249_RS16910;Dbxref=Genbank:WP_221071825.1;Name=WP_221071825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452203.1;locus_tag=VA249_RS16910;product=BatD family protein;protein_id=WP_221071825.1;transl_table=11 NZ_AP024166.1 RefSeq gene 541955 542380 . + . ID=gene-VA249_RS16915;Name=VA249_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16915;old_locus_tag=VYA_31710 NZ_AP024166.1 Protein Homology CDS 541955 542380 . + 0 ID=cds-WP_221071826.1;Parent=gene-VA249_RS16915;Dbxref=Genbank:WP_221071826.1;Name=WP_221071826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017079591.1;locus_tag=VA249_RS16915;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_221071826.1;transl_table=11 NZ_AP024166.1 RefSeq gene 542519 543418 . + . ID=gene-VA249_RS16920;Name=VA249_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16920;old_locus_tag=VYA_31720 NZ_AP024166.1 Protein Homology CDS 542519 543418 . + 0 ID=cds-WP_221071827.1;Parent=gene-VA249_RS16920;Dbxref=Genbank:WP_221071827.1;Name=WP_221071827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447163.1;locus_tag=VA249_RS16920;product=LysR substrate-binding domain-containing protein;protein_id=WP_221071827.1;transl_table=11 NZ_AP024166.1 RefSeq gene 543561 543896 . - . ID=gene-VA249_RS16925;Name=VA249_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16925;old_locus_tag=VYA_31730 NZ_AP024166.1 Protein Homology CDS 543561 543896 . - 0 ID=cds-WP_221071828.1;Parent=gene-VA249_RS16925;Dbxref=Genbank:WP_221071828.1;Name=WP_221071828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447161.1;locus_tag=VA249_RS16925;product=NirD/YgiW/YdeI family stress tolerance protein;protein_id=WP_221071828.1;transl_table=11 NZ_AP024166.1 RefSeq gene 543914 544555 . - . ID=gene-VA249_RS16930;Name=VA249_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16930;old_locus_tag=VYA_31740 NZ_AP024166.1 Protein Homology CDS 543914 544555 . - 0 ID=cds-WP_221071829.1;Parent=gene-VA249_RS16930;Dbxref=Genbank:WP_221071829.1;Name=WP_221071829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005388236.1;locus_tag=VA249_RS16930;product=AcfA family outer membrane beta-barrel protein;protein_id=WP_221071829.1;transl_table=11 NZ_AP024166.1 RefSeq gene 544713 545693 . - . ID=gene-VA249_RS16935;Name=VA249_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16935;old_locus_tag=VYA_31750 NZ_AP024166.1 Protein Homology CDS 544713 545693 . - 0 ID=cds-WP_221071830.1;Parent=gene-VA249_RS16935;Dbxref=Genbank:WP_221071830.1;Name=WP_221071830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188902.1;locus_tag=VA249_RS16935;product=haloacid dehalogenase-like hydrolase;protein_id=WP_221071830.1;transl_table=11 NZ_AP024166.1 RefSeq gene 545872 546660 . - . ID=gene-VA249_RS16940;Name=VA249_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16940;old_locus_tag=VYA_31760 NZ_AP024166.1 Protein Homology CDS 545872 546660 . - 0 ID=cds-WP_221071831.1;Parent=gene-VA249_RS16940;Dbxref=Genbank:WP_221071831.1;Name=WP_221071831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197460.1;locus_tag=VA249_RS16940;product=formylglycine-generating enzyme family protein;protein_id=WP_221071831.1;transl_table=11 NZ_AP024166.1 RefSeq gene 546837 548159 . + . ID=gene-VA249_RS16945;Name=VA249_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16945;old_locus_tag=VYA_31770 NZ_AP024166.1 Protein Homology CDS 546837 548159 . + 0 ID=cds-WP_221071832.1;Parent=gene-VA249_RS16945;Dbxref=Genbank:WP_221071832.1;Name=WP_221071832.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429281.1;locus_tag=VA249_RS16945;product=anaerobic sulfatase maturase;protein_id=WP_221071832.1;transl_table=11 NZ_AP024166.1 RefSeq gene 548170 549243 . + . ID=gene-VA249_RS16950;Name=VA249_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16950;old_locus_tag=VYA_31780 NZ_AP024166.1 Protein Homology CDS 548170 549243 . + 0 ID=cds-WP_221071833.1;Parent=gene-VA249_RS16950;Dbxref=Genbank:WP_221071833.1;Name=WP_221071833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197462.1;locus_tag=VA249_RS16950;product=tetratricopeptide repeat protein;protein_id=WP_221071833.1;transl_table=11 NZ_AP024166.1 RefSeq gene 549246 550868 . - . ID=gene-VA249_RS16955;Name=VA249_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16955;old_locus_tag=VYA_31790 NZ_AP024166.1 Protein Homology CDS 549246 550868 . - 0 ID=cds-WP_221071834.1;Parent=gene-VA249_RS16955;Dbxref=Genbank:WP_221071834.1;Name=WP_221071834.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842292.1;locus_tag=VA249_RS16955;product=VRR-NUC domain-containing protein;protein_id=WP_221071834.1;transl_table=11 NZ_AP024166.1 RefSeq gene 550964 552196 . - . ID=gene-VA249_RS16960;Name=VA249_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16960;old_locus_tag=VYA_31800 NZ_AP024166.1 Protein Homology CDS 550964 552196 . - 0 ID=cds-WP_221071841.1;Parent=gene-VA249_RS16960;Dbxref=Genbank:WP_221071841.1;Name=WP_221071841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004745674.1;locus_tag=VA249_RS16960;product=OFA family MFS transporter;protein_id=WP_221071841.1;transl_table=11 NZ_AP024166.1 RefSeq gene 552772 553134 . + . ID=gene-VA249_RS16965;Name=VA249_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16965;old_locus_tag=VYA_31810 NZ_AP024166.1 Protein Homology CDS 552772 553134 . + 0 ID=cds-WP_211917476.1;Parent=gene-VA249_RS16965;Dbxref=Genbank:WP_211917476.1;Name=WP_211917476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006960453.1;locus_tag=VA249_RS16965;product=NADH:ubiquinone oxidoreductase;protein_id=WP_211917476.1;transl_table=11 NZ_AP024166.1 RefSeq gene 553250 554617 . - . ID=gene-VA249_RS16970;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=VA249_RS16970;old_locus_tag=VYA_31820 NZ_AP024166.1 Protein Homology CDS 553250 554617 . - 0 ID=cds-WP_128812808.1;Parent=gene-VA249_RS16970;Dbxref=Genbank:WP_128812808.1;Name=WP_128812808.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017633046.1;locus_tag=VA249_RS16970;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_128812808.1;transl_table=11 NZ_AP024166.1 RefSeq gene 554991 556115 . - . ID=gene-VA249_RS16975;Name=VA249_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16975;old_locus_tag=VYA_31830 NZ_AP024166.1 Protein Homology CDS 554991 556115 . - 0 ID=cds-WP_221071843.1;Parent=gene-VA249_RS16975;Dbxref=Genbank:WP_221071843.1;Name=WP_221071843.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197465.1;locus_tag=VA249_RS16975;product=fatty acid desaturase;protein_id=WP_221071843.1;transl_table=11 NZ_AP024166.1 RefSeq gene 556386 556934 . + . ID=gene-VA249_RS16980;Name=VA249_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16980;old_locus_tag=VYA_31850 NZ_AP024166.1 Protein Homology CDS 556386 556934 . + 0 ID=cds-WP_128812810.1;Parent=gene-VA249_RS16980;Dbxref=Genbank:WP_128812810.1;Name=WP_128812810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313129.1;locus_tag=VA249_RS16980;product=GNAT family N-acetyltransferase;protein_id=WP_128812810.1;transl_table=11 NZ_AP024166.1 RefSeq gene 557430 559475 . + . ID=gene-VA249_RS16985;Name=VA249_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS16985;old_locus_tag=VYA_31860 NZ_AP024166.1 Protein Homology CDS 557430 559475 . + 0 ID=cds-WP_221071845.1;Parent=gene-VA249_RS16985;Dbxref=Genbank:WP_221071845.1;Name=WP_221071845.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075137.1;locus_tag=VA249_RS16985;product=response regulator;protein_id=WP_221071845.1;transl_table=11 NZ_AP024166.1 RefSeq gene 559573 560754 . - . ID=gene-VA249_RS16990;Name=cqsA;gbkey=Gene;gene=cqsA;gene_biotype=protein_coding;locus_tag=VA249_RS16990;old_locus_tag=VYA_31870 NZ_AP024166.1 Protein Homology CDS 559573 560754 . - 0 ID=cds-WP_221071847.1;Parent=gene-VA249_RS16990;Dbxref=Genbank:WP_221071847.1;Name=WP_221071847.1;Ontology_term=GO:0030170;gbkey=CDS;gene=cqsA;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734845.1;locus_tag=VA249_RS16990;product=quorum-sensing autoinducer CAI-1 synthase;protein_id=WP_221071847.1;transl_table=11 NZ_AP024166.1 RefSeq gene 561062 562006 . - . ID=gene-VA249_RS16995;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=VA249_RS16995;old_locus_tag=VYA_31880 NZ_AP024166.1 Protein Homology CDS 561062 562006 . - 0 ID=cds-WP_221071858.1;Parent=gene-VA249_RS16995;Dbxref=Genbank:WP_221071858.1;Name=WP_221071858.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017052798.1;locus_tag=VA249_RS16995;product=ribosome biogenesis GTPase YlqF;protein_id=WP_221071858.1;transl_table=11 NZ_AP024166.1 RefSeq gene 562295 563014 . + . ID=gene-VA249_RS17000;Name=VA249_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17000;old_locus_tag=VYA_31890 NZ_AP024166.1 Protein Homology CDS 562295 563014 . + 0 ID=cds-WP_221071860.1;Parent=gene-VA249_RS17000;Dbxref=Genbank:WP_221071860.1;Name=WP_221071860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426806.1;locus_tag=VA249_RS17000;product=nitroreductase family protein;protein_id=WP_221071860.1;transl_table=11 NZ_AP024166.1 RefSeq gene 563270 564250 . + . ID=gene-VA249_RS17005;Name=VA249_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17005;old_locus_tag=VYA_31900 NZ_AP024166.1 Protein Homology CDS 563270 564250 . + 0 ID=cds-WP_221071862.1;Parent=gene-VA249_RS17005;Dbxref=Genbank:WP_221071862.1;Name=WP_221071862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452160.1;locus_tag=VA249_RS17005;product=chemotaxis protein;protein_id=WP_221071862.1;transl_table=11 NZ_AP024166.1 RefSeq gene 564305 564856 . - . ID=gene-VA249_RS17010;Name=VA249_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17010;old_locus_tag=VYA_31910 NZ_AP024166.1 Protein Homology CDS 564305 564856 . - 0 ID=cds-WP_221071864.1;Parent=gene-VA249_RS17010;Dbxref=Genbank:WP_221071864.1;Name=WP_221071864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696154.1;locus_tag=VA249_RS17010;product=type II secretion system GspH family protein;protein_id=WP_221071864.1;transl_table=11 NZ_AP024166.1 RefSeq gene 565282 566004 . + . ID=gene-VA249_RS17015;Name=VA249_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17015;old_locus_tag=VYA_31920 NZ_AP024166.1 Protein Homology CDS 565282 566004 . + 0 ID=cds-WP_221071866.1;Parent=gene-VA249_RS17015;Dbxref=Genbank:WP_221071866.1;Name=WP_221071866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441319.1;locus_tag=VA249_RS17015;product=sulfite exporter TauE/SafE family protein;protein_id=WP_221071866.1;transl_table=11 NZ_AP024166.1 RefSeq gene 566107 567012 . + . ID=gene-VA249_RS17020;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=VA249_RS17020;old_locus_tag=VYA_31930 NZ_AP024166.1 Protein Homology CDS 566107 567012 . + 0 ID=cds-WP_221071869.1;Parent=gene-VA249_RS17020;Dbxref=Genbank:WP_221071869.1;Name=WP_221071869.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842232.1;locus_tag=VA249_RS17020;product=EamA family transporter RarD;protein_id=WP_221071869.1;transl_table=11 NZ_AP024166.1 RefSeq gene 567098 567484 . + . ID=gene-VA249_RS17025;Name=VA249_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17025;old_locus_tag=VYA_31940 NZ_AP024166.1 Protein Homology CDS 567098 567484 . + 0 ID=cds-WP_221071871.1;Parent=gene-VA249_RS17025;Dbxref=Genbank:WP_221071871.1;Name=WP_221071871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452155.1;locus_tag=VA249_RS17025;product=MAPEG family protein;protein_id=WP_221071871.1;transl_table=11 NZ_AP024166.1 RefSeq gene 567478 568011 . + . ID=gene-VA249_RS17030;Name=VA249_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17030;old_locus_tag=VYA_31950 NZ_AP024166.1 Protein Homology CDS 567478 568011 . + 0 ID=cds-WP_221071873.1;Parent=gene-VA249_RS17030;Dbxref=Genbank:WP_221071873.1;Name=WP_221071873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696157.1;locus_tag=VA249_RS17030;product=DNA mismatch repair protein;protein_id=WP_221071873.1;transl_table=11 NZ_AP024166.1 RefSeq gene 568162 568701 . + . ID=gene-VA249_RS17035;Name=VA249_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17035;old_locus_tag=VYA_31960 NZ_AP024166.1 Protein Homology CDS 568162 568701 . + 0 ID=cds-WP_221071875.1;Parent=gene-VA249_RS17035;Dbxref=Genbank:WP_221071875.1;Name=WP_221071875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441328.1;locus_tag=VA249_RS17035;product=phosphatase PAP2 family protein;protein_id=WP_221071875.1;transl_table=11 NZ_AP024166.1 RefSeq gene 569202 570998 . + . ID=gene-VA249_RS17040;Name=VA249_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17040;old_locus_tag=VYA_31970 NZ_AP024166.1 Protein Homology CDS 569202 570998 . + 0 ID=cds-WP_221071877.1;Parent=gene-VA249_RS17040;Dbxref=Genbank:WP_221071877.1;Name=WP_221071877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017789082.1;locus_tag=VA249_RS17040;product=PKD domain-containing protein;protein_id=WP_221071877.1;transl_table=11 NZ_AP024166.1 RefSeq gene 571107 572006 . - . ID=gene-VA249_RS17045;Name=VA249_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17045;old_locus_tag=VYA_31980 NZ_AP024166.1 Protein Homology CDS 571107 572006 . - 0 ID=cds-WP_221071879.1;Parent=gene-VA249_RS17045;Dbxref=Genbank:WP_221071879.1;Name=WP_221071879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020198152.1;locus_tag=VA249_RS17045;product=DMT family transporter;protein_id=WP_221071879.1;transl_table=11 NZ_AP024166.1 RefSeq gene 572164 572622 . + . ID=gene-VA249_RS17050;Name=VA249_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17050;old_locus_tag=VYA_31990 NZ_AP024166.1 Protein Homology CDS 572164 572622 . + 0 ID=cds-WP_221071882.1;Parent=gene-VA249_RS17050;Dbxref=Genbank:WP_221071882.1;Name=WP_221071882.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006742305.1;locus_tag=VA249_RS17050;product=NUDIX domain-containing protein;protein_id=WP_221071882.1;transl_table=11 NZ_AP024166.1 RefSeq gene 572781 574193 . + . ID=gene-VA249_RS17055;Name=VA249_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17055;old_locus_tag=VYA_32000 NZ_AP024166.1 Protein Homology CDS 572781 574193 . + 0 ID=cds-WP_221071883.1;Parent=gene-VA249_RS17055;Dbxref=Genbank:WP_221071883.1;Name=WP_221071883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452131.1;locus_tag=VA249_RS17055;product=coniferyl aldehyde dehydrogenase;protein_id=WP_221071883.1;transl_table=11 NZ_AP024166.1 RefSeq gene 574406 577123 . - . ID=gene-VA249_RS17060;Name=VA249_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17060;old_locus_tag=VYA_32010 NZ_AP024166.1 Protein Homology CDS 574406 577123 . - 0 ID=cds-WP_221071885.1;Parent=gene-VA249_RS17060;Dbxref=Genbank:WP_221071885.1;Name=WP_221071885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441352.1;locus_tag=VA249_RS17060;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_221071885.1;transl_table=11 NZ_AP024166.1 RefSeq gene 577162 578448 . - . ID=gene-VA249_RS17065;Name=VA249_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17065;old_locus_tag=VYA_32020 NZ_AP024166.1 Protein Homology CDS 577162 578448 . - 0 ID=cds-WP_221071888.1;Parent=gene-VA249_RS17065;Dbxref=Genbank:WP_221071888.1;Name=WP_221071888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009699019.1;locus_tag=VA249_RS17065;product=outer membrane protein transport protein;protein_id=WP_221071888.1;transl_table=11 NZ_AP024166.1 RefSeq gene 579294 579773 . - . ID=gene-VA249_RS17070;Name=VA249_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17070;old_locus_tag=VYA_32030 NZ_AP024166.1 Protein Homology CDS 579294 579773 . - 0 ID=cds-WP_221071890.1;Parent=gene-VA249_RS17070;Dbxref=Genbank:WP_221071890.1;Name=WP_221071890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196304.1;locus_tag=VA249_RS17070;product=YbaK/EbsC family protein;protein_id=WP_221071890.1;transl_table=11 NZ_AP024166.1 RefSeq gene 580160 580435 . + . ID=gene-VA249_RS17075;Name=VA249_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17075;old_locus_tag=VYA_32040 NZ_AP024166.1 Protein Homology CDS 580160 580435 . + 0 ID=cds-WP_221071892.1;Parent=gene-VA249_RS17075;Dbxref=Genbank:WP_221071892.1;Name=WP_221071892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010440385.1;locus_tag=VA249_RS17075;product=nitrogenase-stabilizing/protective protein NifW;protein_id=WP_221071892.1;transl_table=11 NZ_AP024166.1 RefSeq gene 580607 581707 . - . ID=gene-VA249_RS17080;Name=VA249_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17080;old_locus_tag=VYA_32050 NZ_AP024166.1 Protein Homology CDS 580607 581707 . - 0 ID=cds-WP_221071894.1;Parent=gene-VA249_RS17080;Dbxref=Genbank:WP_221071894.1;Name=WP_221071894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447064.1;locus_tag=VA249_RS17080;product=alkene reductase;protein_id=WP_221071894.1;transl_table=11 NZ_AP024166.1 RefSeq gene 581719 582105 . - . ID=gene-VA249_RS17085;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=VA249_RS17085;old_locus_tag=VYA_32060 NZ_AP024166.1 Protein Homology CDS 581719 582105 . - 0 ID=cds-WP_221071896.1;Parent=gene-VA249_RS17085;Dbxref=Genbank:WP_221071896.1;Name=WP_221071896.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196299.1;locus_tag=VA249_RS17085;product=lactoylglutathione lyase;protein_id=WP_221071896.1;transl_table=11 NZ_AP024166.1 RefSeq gene 582916 584055 . + . ID=gene-VA249_RS17090;Name=VA249_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17090;old_locus_tag=VYA_32070 NZ_AP024166.1 Protein Homology CDS 582916 584055 . + 0 ID=cds-WP_221071898.1;Parent=gene-VA249_RS17090;Dbxref=Genbank:WP_221071898.1;Name=WP_221071898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009699047.1;locus_tag=VA249_RS17090;product=exonuclease SbcCD subunit D;protein_id=WP_221071898.1;transl_table=11 NZ_AP024166.1 RefSeq gene 584065 587121 . + . ID=gene-VA249_RS17095;Name=VA249_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17095;old_locus_tag=VYA_32080 NZ_AP024166.1 Protein Homology CDS 584065 587121 . + 0 ID=cds-WP_221071900.1;Parent=gene-VA249_RS17095;Dbxref=Genbank:WP_221071900.1;Name=WP_221071900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313298.1;locus_tag=VA249_RS17095;product=SMC family ATPase;protein_id=WP_221071900.1;transl_table=11 NZ_AP024166.1 RefSeq gene 587253 587630 . - . ID=gene-VA249_RS17100;Name=VA249_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17100;old_locus_tag=VYA_32090 NZ_AP024166.1 Protein Homology CDS 587253 587630 . - 0 ID=cds-WP_128812834.1;Parent=gene-VA249_RS17100;Dbxref=Genbank:WP_128812834.1;Name=WP_128812834.1;Ontology_term=GO:0004869;gbkey=CDS;go_function=cysteine-type endopeptidase inhibitor activity|0004869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426749.1;locus_tag=VA249_RS17100;product=cystatin domain-containing protein;protein_id=WP_128812834.1;transl_table=11 NZ_AP024166.1 RefSeq gene 587942 590113 . + . ID=gene-VA249_RS17105;Name=VA249_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17105;old_locus_tag=VYA_32100 NZ_AP024166.1 Protein Homology CDS 587942 590113 . + 0 ID=cds-WP_225927155.1;Parent=gene-VA249_RS17105;Dbxref=Genbank:WP_225927155.1;Name=WP_225927155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733933.1;locus_tag=VA249_RS17105;product=DUF5011 domain-containing protein;protein_id=WP_225927155.1;transl_table=11 NZ_AP024166.1 RefSeq gene 590457 590996 . + . ID=gene-VA249_RS17110;Name=VA249_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17110;old_locus_tag=VYA_32110 NZ_AP024166.1 Protein Homology CDS 590457 590996 . + 0 ID=cds-WP_221071904.1;Parent=gene-VA249_RS17110;Dbxref=Genbank:WP_221071904.1;Name=WP_221071904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313296.1;locus_tag=VA249_RS17110;product=adenylate kinase;protein_id=WP_221071904.1;transl_table=11 NZ_AP024166.1 RefSeq gene 591096 591524 . + . ID=gene-VA249_RS17115;Name=VA249_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17115;old_locus_tag=VYA_32120 NZ_AP024166.1 Protein Homology CDS 591096 591524 . + 0 ID=cds-WP_221071906.1;Parent=gene-VA249_RS17115;Dbxref=Genbank:WP_221071906.1;Name=WP_221071906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196265.1;locus_tag=VA249_RS17115;product=hypothetical protein;protein_id=WP_221071906.1;transl_table=11 NZ_AP024166.1 RefSeq gene 591552 592079 . + . ID=gene-VA249_RS17120;Name=VA249_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17120;old_locus_tag=VYA_32130 NZ_AP024166.1 Protein Homology CDS 591552 592079 . + 0 ID=cds-WP_221071908.1;Parent=gene-VA249_RS17120;Dbxref=Genbank:WP_221071908.1;Name=WP_221071908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446987.1;locus_tag=VA249_RS17120;product=phosphoglycerate mutase family protein;protein_id=WP_221071908.1;transl_table=11 NZ_AP024166.1 RefSeq gene 592136 592672 . + . ID=gene-VA249_RS17125;Name=VA249_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17125;old_locus_tag=VYA_32140 NZ_AP024166.1 Protein Homology CDS 592136 592672 . + 0 ID=cds-WP_221071910.1;Parent=gene-VA249_RS17125;Dbxref=Genbank:WP_221071910.1;Name=WP_221071910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004745969.1;locus_tag=VA249_RS17125;product=lipocalin family protein;protein_id=WP_221071910.1;transl_table=11 NZ_AP024166.1 RefSeq gene 592978 595449 . + . ID=gene-VA249_RS17130;Name=VA249_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17130;old_locus_tag=VYA_32150 NZ_AP024166.1 Protein Homology CDS 592978 595449 . + 0 ID=cds-WP_221071912.1;Parent=gene-VA249_RS17130;Dbxref=Genbank:WP_221071912.1;Name=WP_221071912.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.2;locus_tag=VA249_RS17130;product=Ig-like domain-containing protein;protein_id=WP_221071912.1;transl_table=11 NZ_AP024166.1 RefSeq gene 595727 598591 . - . ID=gene-VA249_RS17135;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=VA249_RS17135;old_locus_tag=VYA_32160 NZ_AP024166.1 Protein Homology CDS 595727 598591 . - 0 ID=cds-WP_221071914.1;Parent=gene-VA249_RS17135;Dbxref=Genbank:WP_221071914.1;Name=WP_221071914.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189009.1;locus_tag=VA249_RS17135;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_221071914.1;transl_table=11 NZ_AP024166.1 RefSeq gene 598716 599096 . - . ID=gene-VA249_RS17140;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=VA249_RS17140;old_locus_tag=VYA_32170 NZ_AP024166.1 Protein Homology CDS 598716 599096 . - 0 ID=cds-WP_009704500.1;Parent=gene-VA249_RS17140;Dbxref=Genbank:WP_009704500.1;Name=WP_009704500.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361810.1;locus_tag=VA249_RS17140;product=glycine cleavage system protein GcvH;protein_id=WP_009704500.1;transl_table=11 NZ_AP024166.1 RefSeq gene 599149 600444 . - . ID=gene-VA249_RS17145;Name=VA249_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17145;old_locus_tag=VYA_32180 NZ_AP024166.1 Protein Homology CDS 599149 600444 . - 0 ID=cds-WP_221071916.1;Parent=gene-VA249_RS17145;Dbxref=Genbank:WP_221071916.1;Name=WP_221071916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197066.1;locus_tag=VA249_RS17145;product=serine hydroxymethyltransferase;protein_id=WP_221071916.1;transl_table=11 NZ_AP024166.1 RefSeq gene 600825 601448 . + . ID=gene-VA249_RS17150;Name=VA249_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17150;old_locus_tag=VYA_32190 NZ_AP024166.1 Protein Homology CDS 600825 601448 . + 0 ID=cds-WP_128812854.1;Parent=gene-VA249_RS17150;Dbxref=Genbank:WP_128812854.1;Name=WP_128812854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008216960.1;locus_tag=VA249_RS17150;product=XRE family transcriptional regulator;protein_id=WP_128812854.1;transl_table=11 NZ_AP024166.1 RefSeq gene 601708 602826 . + . ID=gene-VA249_RS17155;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=VA249_RS17155;old_locus_tag=VYA_32200 NZ_AP024166.1 Protein Homology CDS 601708 602826 . + 0 ID=cds-WP_221071918.1;Parent=gene-VA249_RS17155;Dbxref=Genbank:WP_221071918.1;Name=WP_221071918.1;Ontology_term=GO:0006546,GO:0004047;gbkey=CDS;gene=gcvT;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009599481.1;locus_tag=VA249_RS17155;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_221071918.1;transl_table=11 NZ_AP024166.1 RefSeq gene 603103 603828 . - . ID=gene-VA249_RS17160;Name=VA249_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17160;old_locus_tag=VYA_32210 NZ_AP024166.1 Protein Homology CDS 603103 603828 . - 0 ID=cds-WP_221072218.1;Parent=gene-VA249_RS17160;Dbxref=Genbank:WP_221072218.1;Name=WP_221072218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530775.1;locus_tag=VA249_RS17160;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221072218.1;transl_table=11 NZ_AP024166.1 RefSeq gene 603992 605065 . + . ID=gene-VA249_RS17165;Name=VA249_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17165;old_locus_tag=VYA_32220 NZ_AP024166.1 Protein Homology CDS 603992 605065 . + 0 ID=cds-WP_221071920.1;Parent=gene-VA249_RS17165;Dbxref=Genbank:WP_221071920.1;Name=WP_221071920.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431252.1;locus_tag=VA249_RS17165;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221071920.1;transl_table=11 NZ_AP024166.1 RefSeq gene 605065 606126 . + . ID=gene-VA249_RS17170;Name=VA249_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17170;old_locus_tag=VYA_32230 NZ_AP024166.1 Protein Homology CDS 605065 606126 . + 0 ID=cds-WP_221071922.1;Parent=gene-VA249_RS17170;Dbxref=Genbank:WP_221071922.1;Name=WP_221071922.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478445.1;locus_tag=VA249_RS17170;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221071922.1;transl_table=11 NZ_AP024166.1 RefSeq gene 606126 609185 . + . ID=gene-VA249_RS17175;Name=VA249_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17175;old_locus_tag=VYA_32240 NZ_AP024166.1 Protein Homology CDS 606126 609185 . + 0 ID=cds-WP_221071925.1;Parent=gene-VA249_RS17175;Dbxref=Genbank:WP_221071925.1;Name=WP_221071925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478455.1;locus_tag=VA249_RS17175;product=efflux RND transporter permease subunit;protein_id=WP_221071925.1;transl_table=11 NZ_AP024166.1 RefSeq gene 609432 610184 . + . ID=gene-VA249_RS17180;Name=VA249_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17180;old_locus_tag=VYA_32250 NZ_AP024166.1 Protein Homology CDS 609432 610184 . + 0 ID=cds-WP_221071927.1;Parent=gene-VA249_RS17180;Dbxref=Genbank:WP_221071927.1;Name=WP_221071927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189014.1;locus_tag=VA249_RS17180;product=hypothetical protein;protein_id=WP_221071927.1;transl_table=11 NZ_AP024166.1 RefSeq gene 610308 612053 . - . ID=gene-VA249_RS17185;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=VA249_RS17185;old_locus_tag=VYA_32260 NZ_AP024166.1 Protein Homology CDS 610308 612053 . - 0 ID=cds-WP_221071929.1;Parent=gene-VA249_RS17185;Dbxref=Genbank:WP_221071929.1;Name=WP_221071929.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431388.1;locus_tag=VA249_RS17185;product=PTS fructose transporter subunit IIBC;protein_id=WP_221071929.1;transl_table=11 NZ_AP024166.1 RefSeq gene 612073 613077 . - . ID=gene-VA249_RS17190;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=VA249_RS17190;old_locus_tag=VYA_32270 NZ_AP024166.1 Protein Homology CDS 612073 613077 . - 0 ID=cds-WP_221071931.1;Parent=gene-VA249_RS17190;Dbxref=Genbank:WP_221071931.1;Name=WP_221071931.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189019.1;locus_tag=VA249_RS17190;product=1-phosphofructokinase;protein_id=WP_221071931.1;transl_table=11 NZ_AP024166.1 RefSeq gene 613089 614219 . - . ID=gene-VA249_RS17195;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=VA249_RS17195;old_locus_tag=VYA_32280 NZ_AP024166.1 Protein Homology CDS 613089 614219 . - 0 ID=cds-WP_221071933.1;Parent=gene-VA249_RS17195;Dbxref=Genbank:WP_221071933.1;Name=WP_221071933.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017096323.1;locus_tag=VA249_RS17195;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_221071933.1;transl_table=11 NZ_AP024166.1 RefSeq gene 614633 615613 . + . ID=gene-VA249_RS17200;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=VA249_RS17200;old_locus_tag=VYA_32290 NZ_AP024166.1 Protein Homology CDS 614633 615613 . + 0 ID=cds-WP_221071935.1;Parent=gene-VA249_RS17200;Dbxref=Genbank:WP_221071935.1;Name=WP_221071935.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017790867.1;locus_tag=VA249_RS17200;product=catabolite repressor/activator;protein_id=WP_221071935.1;transl_table=11 NZ_AP024166.1 RefSeq gene 615709 616662 . - . ID=gene-VA249_RS17205;Name=VA249_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17205;old_locus_tag=VYA_32300 NZ_AP024166.1 Protein Homology CDS 615709 616662 . - 0 ID=cds-WP_221071936.1;Parent=gene-VA249_RS17205;Dbxref=Genbank:WP_221071936.1;Name=WP_221071936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649345.1;locus_tag=VA249_RS17205;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_221071936.1;transl_table=11 NZ_AP024166.1 RefSeq gene 616800 617354 . + . ID=gene-VA249_RS17210;Name=VA249_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17210;old_locus_tag=VYA_32310 NZ_AP024166.1 Protein Homology CDS 616800 617354 . + 0 ID=cds-WP_221071937.1;Parent=gene-VA249_RS17210;Dbxref=Genbank:WP_221071937.1;Name=WP_221071937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649343.1;locus_tag=VA249_RS17210;product=RNA-binding S4 domain-containing protein;protein_id=WP_221071937.1;transl_table=11 NZ_AP024166.1 RefSeq gene 617784 618833 . + . ID=gene-VA249_RS17215;Name=VA249_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17215;old_locus_tag=VYA_32320 NZ_AP024166.1 Protein Homology CDS 617784 618833 . + 0 ID=cds-WP_221071938.1;Parent=gene-VA249_RS17215;Dbxref=Genbank:WP_221071938.1;Name=WP_221071938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600212.1;locus_tag=VA249_RS17215;product=alpha/beta hydrolase;protein_id=WP_221071938.1;transl_table=11 NZ_AP024166.1 RefSeq gene 619119 620903 . + . ID=gene-VA249_RS17220;Name=VA249_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17220;old_locus_tag=VYA_32340 NZ_AP024166.1 Protein Homology CDS 619119 620903 . + 0 ID=cds-WP_225927150.1;Parent=gene-VA249_RS17220;Dbxref=Genbank:WP_225927150.1;Name=WP_225927150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017091761.1;locus_tag=VA249_RS17220;product=mechanosensitive ion channel family protein;protein_id=WP_225927150.1;transl_table=11 NZ_AP024166.1 RefSeq gene 621047 621985 . - . ID=gene-VA249_RS17225;Name=VA249_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17225;old_locus_tag=VYA_32350 NZ_AP024166.1 Protein Homology CDS 621047 621985 . - 0 ID=cds-WP_221071939.1;Parent=gene-VA249_RS17225;Dbxref=Genbank:WP_221071939.1;Name=WP_221071939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600214.1;locus_tag=VA249_RS17225;product=LysR family transcriptional regulator;protein_id=WP_221071939.1;transl_table=11 NZ_AP024166.1 RefSeq gene 622224 622901 . - . ID=gene-VA249_RS17230;Name=VA249_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17230;old_locus_tag=VYA_32360 NZ_AP024166.1 Protein Homology CDS 622224 622901 . - 0 ID=cds-WP_221071940.1;Parent=gene-VA249_RS17230;Dbxref=Genbank:WP_221071940.1;Name=WP_221071940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017091758.1;locus_tag=VA249_RS17230;product=hypothetical protein;protein_id=WP_221071940.1;transl_table=11 NZ_AP024166.1 RefSeq gene 623122 623772 . - . ID=gene-VA249_RS17235;Name=VA249_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17235;old_locus_tag=VYA_32370 NZ_AP024166.1 Protein Homology CDS 623122 623772 . - 0 ID=cds-WP_211917382.1;Parent=gene-VA249_RS17235;Dbxref=Genbank:WP_211917382.1;Name=WP_211917382.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017091757.1;locus_tag=VA249_RS17235;product=MarC family NAAT transporter;protein_id=WP_211917382.1;transl_table=11 NZ_AP024166.1 RefSeq gene 623793 625184 . - . ID=gene-VA249_RS17240;Name=VA249_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17240;old_locus_tag=VYA_32380 NZ_AP024166.1 Protein Homology CDS 623793 625184 . - 0 ID=cds-WP_221071941.1;Parent=gene-VA249_RS17240;Dbxref=Genbank:WP_221071941.1;Name=WP_221071941.1;Ontology_term=GO:0006812,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600218.1;locus_tag=VA249_RS17240;product=magnesium transporter;protein_id=WP_221071941.1;transl_table=11 NZ_AP024166.1 RefSeq gene 625227 625883 . - . ID=gene-VA249_RS17245;Name=VA249_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17245;old_locus_tag=VYA_32390 NZ_AP024166.1 Protein Homology CDS 625227 625883 . - 0 ID=cds-WP_221071942.1;Parent=gene-VA249_RS17245;Dbxref=Genbank:WP_221071942.1;Name=WP_221071942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006069692.1;locus_tag=VA249_RS17245;product=DedA family protein;protein_id=WP_221071942.1;transl_table=11 NZ_AP024166.1 RefSeq gene 625941 627032 . - . ID=gene-VA249_RS17250;Name=VA249_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17250;old_locus_tag=VYA_32400 NZ_AP024166.1 Protein Homology CDS 625941 627032 . - 0 ID=cds-WP_221071945.1;Parent=gene-VA249_RS17250;Dbxref=Genbank:WP_221071945.1;Name=WP_221071945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017041954.1;locus_tag=VA249_RS17250;product=calcium:proton antiporter;protein_id=WP_221071945.1;transl_table=11 NZ_AP024166.1 RefSeq gene 627275 627631 . + . ID=gene-VA249_RS17255;Name=VA249_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17255;old_locus_tag=VYA_32410 NZ_AP024166.1 GeneMarkS-2+ CDS 627275 627631 . + 0 ID=cds-WP_221071947.1;Parent=gene-VA249_RS17255;Dbxref=Genbank:WP_221071947.1;Name=WP_221071947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS17255;product=hypothetical protein;protein_id=WP_221071947.1;transl_table=11 NZ_AP024166.1 RefSeq gene 627638 628558 . - . ID=gene-VA249_RS17260;Name=VA249_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17260;old_locus_tag=VYA_32420 NZ_AP024166.1 Protein Homology CDS 627638 628558 . - 0 ID=cds-WP_221071949.1;Parent=gene-VA249_RS17260;Dbxref=Genbank:WP_221071949.1;Name=WP_221071949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189021.1;locus_tag=VA249_RS17260;product=amino acid ABC transporter permease;protein_id=WP_221071949.1;transl_table=11 NZ_AP024166.1 RefSeq gene 628671 629489 . - . ID=gene-VA249_RS17265;Name=VA249_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17265;old_locus_tag=VYA_32430 NZ_AP024166.1 Protein Homology CDS 628671 629489 . - 0 ID=cds-WP_128812865.1;Parent=gene-VA249_RS17265;Dbxref=Genbank:WP_128812865.1;Name=WP_128812865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431246.1;locus_tag=VA249_RS17265;product=transporter substrate-binding domain-containing protein;protein_id=WP_128812865.1;transl_table=11 NZ_AP024166.1 RefSeq gene 629499 630296 . - . ID=gene-VA249_RS17270;Name=VA249_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17270;old_locus_tag=VYA_32440 NZ_AP024166.1 Protein Homology CDS 629499 630296 . - 0 ID=cds-WP_221071952.1;Parent=gene-VA249_RS17270;Dbxref=Genbank:WP_221071952.1;Name=WP_221071952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530801.1;locus_tag=VA249_RS17270;product=amino acid ABC transporter permease;protein_id=WP_221071952.1;transl_table=11 NZ_AP024166.1 RefSeq gene 630300 631034 . - . ID=gene-VA249_RS17275;Name=VA249_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17275;old_locus_tag=VYA_32450 NZ_AP024166.1 Protein Homology CDS 630300 631034 . - 0 ID=cds-WP_128812867.1;Parent=gene-VA249_RS17275;Dbxref=Genbank:WP_128812867.1;Name=WP_128812867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820955.1;locus_tag=VA249_RS17275;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_128812867.1;transl_table=11 NZ_AP024166.1 RefSeq gene 631230 632378 . - . ID=gene-VA249_RS17280;Name=VA249_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17280;old_locus_tag=VYA_32460 NZ_AP024166.1 Protein Homology CDS 631230 632378 . - 0 ID=cds-WP_221071953.1;Parent=gene-VA249_RS17280;Dbxref=Genbank:WP_221071953.1;Name=WP_221071953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397625.1;locus_tag=VA249_RS17280;product=iron-containing alcohol dehydrogenase;protein_id=WP_221071953.1;transl_table=11 NZ_AP024166.1 RefSeq gene 632583 633461 . + . ID=gene-VA249_RS17285;Name=VA249_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17285;old_locus_tag=VYA_32470 NZ_AP024166.1 Protein Homology CDS 632583 633461 . + 0 ID=cds-WP_221071955.1;Parent=gene-VA249_RS17285;Dbxref=Genbank:WP_221071955.1;Name=WP_221071955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008076121.1;locus_tag=VA249_RS17285;product=AraC family transcriptional regulator;protein_id=WP_221071955.1;transl_table=11 NZ_AP024166.1 RefSeq gene 633616 634830 . - . ID=gene-VA249_RS17290;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=VA249_RS17290;old_locus_tag=VYA_32480 NZ_AP024166.1 Protein Homology CDS 633616 634830 . - 0 ID=cds-WP_221071957.1;Parent=gene-VA249_RS17290;Dbxref=Genbank:WP_221071957.1;Name=WP_221071957.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189025.1;locus_tag=VA249_RS17290;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_221071957.1;transl_table=11 NZ_AP024166.1 RefSeq gene 635256 637004 . - . ID=gene-VA249_RS17295;Name=VA249_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17295;old_locus_tag=VYA_32490 NZ_AP024166.1 Protein Homology CDS 635256 637004 . - 0 ID=cds-WP_221071960.1;Parent=gene-VA249_RS17295;Dbxref=Genbank:WP_221071960.1;Name=WP_221071960.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819588.1;locus_tag=VA249_RS17295;product=formate--tetrahydrofolate ligase;protein_id=WP_221071960.1;transl_table=11 NZ_AP024166.1 RefSeq gene 637252 638556 . - . ID=gene-VA249_RS17300;Name=VA249_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17300;old_locus_tag=VYA_32500 NZ_AP024166.1 Protein Homology CDS 637252 638556 . - 0 ID=cds-WP_211917355.1;Parent=gene-VA249_RS17300;Dbxref=Genbank:WP_211917355.1;Name=WP_211917355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017046075.1;locus_tag=VA249_RS17300;product=inosine/guanosine kinase;protein_id=WP_211917355.1;transl_table=11 NZ_AP024166.1 RefSeq gene 638687 639160 . - . ID=gene-VA249_RS17305;Name=VA249_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17305;old_locus_tag=VYA_32510 NZ_AP024166.1 Protein Homology CDS 638687 639160 . - 0 ID=cds-WP_221071962.1;Parent=gene-VA249_RS17305;Dbxref=Genbank:WP_221071962.1;Name=WP_221071962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234278.1;locus_tag=VA249_RS17305;product=CreA family protein;protein_id=WP_221071962.1;transl_table=11 NZ_AP024166.1 RefSeq gene 639374 639883 . + . ID=gene-VA249_RS17310;Name=VA249_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17310;old_locus_tag=VYA_32520 NZ_AP024166.1 Protein Homology CDS 639374 639883 . + 0 ID=cds-WP_221071964.1;Parent=gene-VA249_RS17310;Dbxref=Genbank:WP_221071964.1;Name=WP_221071964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431602.1;locus_tag=VA249_RS17310;product=flavodoxin;protein_id=WP_221071964.1;transl_table=11 NZ_AP024166.1 RefSeq gene 640007 641758 . + . ID=gene-VA249_RS17315;Name=VA249_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17315;old_locus_tag=VYA_32530 NZ_AP024166.1 Protein Homology CDS 640007 641758 . + 0 ID=cds-WP_221071966.1;Parent=gene-VA249_RS17315;Dbxref=Genbank:WP_221071966.1;Name=WP_221071966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431598.1;locus_tag=VA249_RS17315;product=HD domain-containing protein;protein_id=WP_221071966.1;transl_table=11 NZ_AP024166.1 RefSeq gene 641956 642618 . + . ID=gene-VA249_RS17320;Name=VA249_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17320;old_locus_tag=VYA_32540 NZ_AP024166.1 Protein Homology CDS 641956 642618 . + 0 ID=cds-WP_221071968.1;Parent=gene-VA249_RS17320;Dbxref=Genbank:WP_221071968.1;Name=WP_221071968.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649317.1;locus_tag=VA249_RS17320;product=HAD-IA family hydrolase;protein_id=WP_221071968.1;transl_table=11 NZ_AP024166.1 RefSeq gene 643489 644085 . + . ID=gene-VA249_RS17325;Name=VA249_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17325 NZ_AP024166.1 Protein Homology CDS 643489 644085 . + 0 ID=cds-WP_221071970.1;Parent=gene-VA249_RS17325;Dbxref=Genbank:WP_221071970.1;Name=WP_221071970.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696702.1;locus_tag=VA249_RS17325;product=ACP phosphodiesterase;protein_id=WP_221071970.1;transl_table=11 NZ_AP024166.1 RefSeq gene 644161 645414 . + . ID=gene-VA249_RS17330;Name=VA249_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17330;old_locus_tag=VYA_32560 NZ_AP024166.1 Protein Homology CDS 644161 645414 . + 0 ID=cds-WP_221071980.1;Parent=gene-VA249_RS17330;Dbxref=Genbank:WP_221071980.1;Name=WP_221071980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819590.1;locus_tag=VA249_RS17330;product=DEAD/DEAH box helicase;protein_id=WP_221071980.1;transl_table=11 NZ_AP024166.1 RefSeq gene 645830 646462 . - . ID=gene-VA249_RS17335;Name=VA249_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17335;old_locus_tag=VYA_32570 NZ_AP024166.1 Protein Homology CDS 645830 646462 . - 0 ID=cds-WP_128812874.1;Parent=gene-VA249_RS17335;Dbxref=Genbank:WP_128812874.1;Name=WP_128812874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376385.1;locus_tag=VA249_RS17335;product=hypothetical protein;protein_id=WP_128812874.1;transl_table=11 NZ_AP024166.1 RefSeq gene 646594 646836 . + . ID=gene-VA249_RS17340;Name=VA249_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17340;old_locus_tag=VYA_32580 NZ_AP024166.1 Protein Homology CDS 646594 646836 . + 0 ID=cds-WP_128812875.1;Parent=gene-VA249_RS17340;Dbxref=Genbank:WP_128812875.1;Name=WP_128812875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649305.1;locus_tag=VA249_RS17340;product=DUF2164 domain-containing protein;protein_id=WP_128812875.1;transl_table=11 NZ_AP024166.1 RefSeq gene 647000 647539 . + . ID=gene-VA249_RS17345;Name=VA249_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17345;old_locus_tag=VYA_32590 NZ_AP024166.1 Protein Homology CDS 647000 647539 . + 0 ID=cds-WP_221071982.1;Parent=gene-VA249_RS17345;Dbxref=Genbank:WP_221071982.1;Name=WP_221071982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841235.1;locus_tag=VA249_RS17345;product=cytochrome b;protein_id=WP_221071982.1;transl_table=11 NZ_AP024166.1 RefSeq gene 647536 648105 . + . ID=gene-VA249_RS17350;Name=VA249_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17350;old_locus_tag=VYA_32600 NZ_AP024166.1 Protein Homology CDS 647536 648105 . + 0 ID=cds-WP_221071985.1;Parent=gene-VA249_RS17350;Dbxref=Genbank:WP_221071985.1;Name=WP_221071985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011081206.1;locus_tag=VA249_RS17350;product=YceI family protein;protein_id=WP_221071985.1;transl_table=11 NZ_AP024166.1 RefSeq gene 648231 649682 . - . ID=gene-VA249_RS17355;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=VA249_RS17355;old_locus_tag=VYA_32610 NZ_AP024166.1 Protein Homology CDS 648231 649682 . - 0 ID=cds-WP_221071987.1;Parent=gene-VA249_RS17355;Dbxref=Genbank:WP_221071987.1;Name=WP_221071987.1;Ontology_term=GO:0015724,GO:0015499,GO:0005887;gbkey=CDS;gene=focA;go_component=integral component of plasma membrane|0005887||IEA;go_function=formate transmembrane transporter activity|0015499||IEA;go_process=formate transport|0015724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019821166.1;locus_tag=VA249_RS17355;product=formate transporter FocA;protein_id=WP_221071987.1;transl_table=11 NZ_AP024166.1 RefSeq gene 649967 650872 . + . ID=gene-VA249_RS17360;Name=VA249_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17360;old_locus_tag=VYA_32620 NZ_AP024166.1 Protein Homology CDS 649967 650872 . + 0 ID=cds-WP_128813509.1;Parent=gene-VA249_RS17360;Dbxref=Genbank:WP_128813509.1;Name=WP_128813509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005395522.1;locus_tag=VA249_RS17360;product=LysR substrate-binding domain-containing protein;protein_id=WP_128813509.1;transl_table=11 NZ_AP024166.1 RefSeq gene 651171 651650 . + . ID=gene-VA249_RS17365;Name=VA249_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17365;old_locus_tag=VYA_32630 NZ_AP024166.1 Protein Homology CDS 651171 651650 . + 0 ID=cds-WP_221072222.1;Parent=gene-VA249_RS17365;Dbxref=Genbank:WP_221072222.1;Name=WP_221072222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010649293.1;locus_tag=VA249_RS17365;product=DUF1097 family protein;protein_id=WP_221072222.1;transl_table=11 NZ_AP024166.1 RefSeq gene 651815 653449 . - . ID=gene-VA249_RS17370;Name=VA249_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17370;old_locus_tag=VYA_32640 NZ_AP024166.1 Protein Homology CDS 651815 653449 . - 0 ID=cds-WP_221071989.1;Parent=gene-VA249_RS17370;Dbxref=Genbank:WP_221071989.1;Name=WP_221071989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005524618.1;locus_tag=VA249_RS17370;product=ATP-dependent endonuclease;protein_id=WP_221071989.1;transl_table=11 NZ_AP024166.1 RefSeq gene 653735 655477 . + . ID=gene-VA249_RS17375;Name=VA249_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17375;old_locus_tag=VYA_32650 NZ_AP024166.1 Protein Homology CDS 653735 655477 . + 0 ID=cds-WP_221071991.1;Parent=gene-VA249_RS17375;Dbxref=Genbank:WP_221071991.1;Name=WP_221071991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196919.1;locus_tag=VA249_RS17375;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_221071991.1;transl_table=11 NZ_AP024166.1 RefSeq gene 656139 657149 . + . ID=gene-VA249_RS17380;Name=VA249_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17380;old_locus_tag=VYA_32660 NZ_AP024166.1 Protein Homology CDS 656139 657149 . + 0 ID=cds-WP_221072003.1;Parent=gene-VA249_RS17380;Dbxref=Genbank:WP_221072003.1;Name=WP_221072003.1;Ontology_term=GO:0008150,GO:0003674,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530850.1;locus_tag=VA249_RS17380;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_221072003.1;transl_table=11 NZ_AP024166.1 RefSeq gene 657437 657625 . + . ID=gene-VA249_RS17385;Name=VA249_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17385;old_locus_tag=VYA_32670 NZ_AP024166.1 Protein Homology CDS 657437 657625 . + 0 ID=cds-WP_221072004.1;Parent=gene-VA249_RS17385;Dbxref=Genbank:WP_221072004.1;Name=WP_221072004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035884.1;locus_tag=VA249_RS17385;product=hypothetical protein;protein_id=WP_221072004.1;transl_table=11 NZ_AP024166.1 RefSeq gene 657812 658369 . - . ID=gene-VA249_RS17390;Name=VA249_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17390;old_locus_tag=VYA_32680 NZ_AP024166.1 Protein Homology CDS 657812 658369 . - 0 ID=cds-WP_128812883.1;Parent=gene-VA249_RS17390;Dbxref=Genbank:WP_128812883.1;Name=WP_128812883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017111983.1;locus_tag=VA249_RS17390;product=alkylphosphonate utilization protein;protein_id=WP_128812883.1;transl_table=11 NZ_AP024166.1 RefSeq gene 658726 658935 . - . ID=gene-VA249_RS17395;Name=VA249_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17395;old_locus_tag=VYA_32690 NZ_AP024166.1 Protein Homology CDS 658726 658935 . - 0 ID=cds-WP_211917325.1;Parent=gene-VA249_RS17395;Dbxref=Genbank:WP_211917325.1;Name=WP_211917325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841333.1;locus_tag=VA249_RS17395;product=YgdI/YgdR family lipoprotein;protein_id=WP_211917325.1;transl_table=11 NZ_AP024166.1 RefSeq gene 659099 661588 . - . ID=gene-VA249_RS17400;Name=VA249_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17400;old_locus_tag=VYA_32700 NZ_AP024166.1 Protein Homology CDS 659099 661588 . - 0 ID=cds-WP_221072006.1;Parent=gene-VA249_RS17400;Dbxref=Genbank:WP_221072006.1;Name=WP_221072006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008221472.1;locus_tag=VA249_RS17400;product=lipase;protein_id=WP_221072006.1;transl_table=11 NZ_AP024166.1 RefSeq gene 661610 662845 . - . ID=gene-VA249_RS17405;Name=VA249_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17405;old_locus_tag=VYA_32710 NZ_AP024166.1 Protein Homology CDS 661610 662845 . - 0 ID=cds-WP_221072008.1;Parent=gene-VA249_RS17405;Dbxref=Genbank:WP_221072008.1;Name=WP_221072008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531288.1;locus_tag=VA249_RS17405;product=OmpP1/FadL family transporter;protein_id=WP_221072008.1;transl_table=11 NZ_AP024166.1 RefSeq gene 663255 664283 . + . ID=gene-VA249_RS17410;Name=VA249_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17410;old_locus_tag=VYA_32720 NZ_AP024166.1 Protein Homology CDS 663255 664283 . + 0 ID=cds-WP_221072009.1;Parent=gene-VA249_RS17410;Dbxref=Genbank:WP_221072009.1;Name=WP_221072009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005395506.1;locus_tag=VA249_RS17410;product=site-2 protease family protein;protein_id=WP_221072009.1;transl_table=11 NZ_AP024166.1 RefSeq gene 664443 665231 . - . ID=gene-VA249_RS17415;Name=VA249_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17415;old_locus_tag=VYA_32730 NZ_AP024166.1 Protein Homology CDS 664443 665231 . - 0 ID=cds-WP_225927151.1;Parent=gene-VA249_RS17415;Dbxref=Genbank:WP_225927151.1;Name=WP_225927151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012842308.1;locus_tag=VA249_RS17415;product=M48 family metallopeptidase;protein_id=WP_225927151.1;transl_table=11 NZ_AP024166.1 RefSeq gene 665415 665855 . + . ID=gene-VA249_RS17420;Name=VA249_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17420;old_locus_tag=VYA_32740 NZ_AP024166.1 Protein Homology CDS 665415 665855 . + 0 ID=cds-WP_221072014.1;Parent=gene-VA249_RS17420;Dbxref=Genbank:WP_221072014.1;Name=WP_221072014.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129397.1;locus_tag=VA249_RS17420;product=hotdog fold thioesterase;protein_id=WP_221072014.1;transl_table=11 NZ_AP024166.1 RefSeq gene 665927 666160 . + . ID=gene-VA249_RS17425;Name=VA249_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17425;old_locus_tag=VYA_32750 NZ_AP024166.1 Protein Homology CDS 665927 666160 . + 0 ID=cds-WP_221072016.1;Parent=gene-VA249_RS17425;Dbxref=Genbank:WP_221072016.1;Name=WP_221072016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129396.1;locus_tag=VA249_RS17425;product=DUF3389 family protein;protein_id=WP_221072016.1;transl_table=11 NZ_AP024166.1 RefSeq gene 666240 667946 . + . ID=gene-VA249_RS17430;Name=VA249_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17430;old_locus_tag=VYA_32760 NZ_AP024166.1 Protein Homology CDS 666240 667946 . + 0 ID=cds-WP_221072018.1;Parent=gene-VA249_RS17430;Dbxref=Genbank:WP_221072018.1;Name=WP_221072018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819601.1;locus_tag=VA249_RS17430;product=SgrR family transcriptional regulator;protein_id=WP_221072018.1;transl_table=11 NZ_AP024166.1 RefSeq gene 667930 668181 . + . ID=gene-VA249_RS17435;Name=VA249_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17435;old_locus_tag=VYA_32770 NZ_AP024166.1 Protein Homology CDS 667930 668181 . + 0 ID=cds-WP_221072020.1;Parent=gene-VA249_RS17435;Dbxref=Genbank:WP_221072020.1;Name=WP_221072020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451836.1;locus_tag=VA249_RS17435;product=hypothetical protein;protein_id=WP_221072020.1;transl_table=11 NZ_AP024166.1 RefSeq gene 668191 668523 . + . ID=gene-VA249_RS17440;Name=VA249_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17440;old_locus_tag=VYA_32780 NZ_AP024166.1 Protein Homology CDS 668191 668523 . + 0 ID=cds-WP_221072224.1;Parent=gene-VA249_RS17440;Dbxref=Genbank:WP_221072224.1;Name=WP_221072224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451834.1;locus_tag=VA249_RS17440;product=divalent cation tolerance protein CutA;protein_id=WP_221072224.1;transl_table=11 NZ_AP024166.1 RefSeq gene 668485 669081 . - . ID=gene-VA249_RS17445;Name=VA249_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17445;old_locus_tag=VYA_32790 NZ_AP024166.1 Protein Homology CDS 668485 669081 . - 0 ID=cds-WP_221072022.1;Parent=gene-VA249_RS17445;Dbxref=Genbank:WP_221072022.1;Name=WP_221072022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451832.1;locus_tag=VA249_RS17445;product=DUF2238 domain-containing protein;protein_id=WP_221072022.1;transl_table=11 NZ_AP024166.1 RefSeq gene 669303 670142 . + . ID=gene-VA249_RS17450;Name=VA249_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17450;old_locus_tag=VYA_32810 NZ_AP024166.1 Protein Homology CDS 669303 670142 . + 0 ID=cds-WP_221072023.1;Parent=gene-VA249_RS17450;Dbxref=Genbank:WP_221072023.1;Name=WP_221072023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020329119.1;locus_tag=VA249_RS17450;product=isopenicillin N synthase family oxygenase;protein_id=WP_221072023.1;transl_table=11 NZ_AP024166.1 RefSeq gene 670271 670891 . + . ID=gene-VA249_RS17455;Name=VA249_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17455;old_locus_tag=VYA_32820 NZ_AP024166.1 Protein Homology CDS 670271 670891 . + 0 ID=cds-WP_221072024.1;Parent=gene-VA249_RS17455;Dbxref=Genbank:WP_221072024.1;Name=WP_221072024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427209.1;locus_tag=VA249_RS17455;product=J domain-containing protein;protein_id=WP_221072024.1;transl_table=11 NZ_AP024166.1 RefSeq gene 670989 672644 . - . ID=gene-VA249_RS17460;Name=VA249_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17460;old_locus_tag=VYA_32830 NZ_AP024166.1 Protein Homology CDS 670989 672644 . - 0 ID=cds-WP_221072025.1;Parent=gene-VA249_RS17460;Dbxref=Genbank:WP_221072025.1;Name=WP_221072025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016785233.1;locus_tag=VA249_RS17460;product=ABC-ATPase domain-containing protein;protein_id=WP_221072025.1;transl_table=11 NZ_AP024166.1 RefSeq gene 672717 674627 . - . ID=gene-VA249_RS17465;Name=VA249_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17465;old_locus_tag=VYA_32840 NZ_AP024166.1 Protein Homology CDS 672717 674627 . - 0 ID=cds-WP_221072026.1;Parent=gene-VA249_RS17465;Dbxref=Genbank:WP_221072026.1;Name=WP_221072026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451769.1;locus_tag=VA249_RS17465;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_221072026.1;transl_table=11 NZ_AP024166.1 RefSeq gene 674876 676075 . - . ID=gene-VA249_RS17470;Name=VA249_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17470;old_locus_tag=VYA_32850 NZ_AP024166.1 Protein Homology CDS 674876 676075 . - 0 ID=cds-WP_221072027.1;Parent=gene-VA249_RS17470;Dbxref=Genbank:WP_221072027.1;Name=WP_221072027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644099.1;locus_tag=VA249_RS17470;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_221072027.1;transl_table=11 NZ_AP024166.1 RefSeq gene 676159 676761 . - . ID=gene-VA249_RS17475;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=VA249_RS17475;old_locus_tag=VYA_32860 NZ_AP024166.1 Protein Homology CDS 676159 676761 . - 0 ID=cds-WP_221072028.1;Parent=gene-VA249_RS17475;Dbxref=Genbank:WP_221072028.1;Name=WP_221072028.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019829569.1;locus_tag=VA249_RS17475;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_221072028.1;transl_table=11 NZ_AP024166.1 RefSeq gene 676760 677461 . + . ID=gene-VA249_RS17480;Name=VA249_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17480;old_locus_tag=VYA_32870 NZ_AP024166.1 Protein Homology CDS 676760 677461 . + 0 ID=cds-WP_221072029.1;Parent=gene-VA249_RS17480;Dbxref=Genbank:WP_221072029.1;Name=WP_221072029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129385.1;locus_tag=VA249_RS17480;product=ABC transporter ATP-binding protein;protein_id=WP_221072029.1;transl_table=11 NZ_AP024166.1 RefSeq gene 677452 679908 . + . ID=gene-VA249_RS17485;Name=VA249_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17485;old_locus_tag=VYA_32880 NZ_AP024166.1 Protein Homology CDS 677452 679908 . + 0 ID=cds-WP_221072030.1;Parent=gene-VA249_RS17485;Dbxref=Genbank:WP_221072030.1;Name=WP_221072030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644106.1;locus_tag=VA249_RS17485;product=ABC transporter permease;protein_id=WP_221072030.1;transl_table=11 NZ_AP024166.1 RefSeq gene 680262 681695 . + . ID=gene-VA249_RS17490;Name=VA249_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17490;old_locus_tag=VYA_32890 NZ_AP024166.1 Protein Homology CDS 680262 681695 . + 0 ID=cds-WP_221072031.1;Parent=gene-VA249_RS17490;Dbxref=Genbank:WP_221072031.1;Name=WP_221072031.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696684.1;locus_tag=VA249_RS17490;product=FAD-dependent oxidoreductase;protein_id=WP_221072031.1;transl_table=11 NZ_AP024166.1 RefSeq gene 681765 682700 . - . ID=gene-VA249_RS17495;Name=VA249_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17495;old_locus_tag=VYA_32900 NZ_AP024166.1 Protein Homology CDS 681765 682700 . - 0 ID=cds-WP_221072033.1;Parent=gene-VA249_RS17495;Dbxref=Genbank:WP_221072033.1;Name=WP_221072033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376316.1;locus_tag=VA249_RS17495;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_221072033.1;transl_table=11 NZ_AP024166.1 RefSeq gene 682697 683380 . - . ID=gene-VA249_RS17500;Name=VA249_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17500;old_locus_tag=VYA_32910 NZ_AP024166.1 Protein Homology CDS 682697 683380 . - 0 ID=cds-WP_221072035.1;Parent=gene-VA249_RS17500;Dbxref=Genbank:WP_221072035.1;Name=WP_221072035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451781.1;locus_tag=VA249_RS17500;product=carboxyltransferase domain-containing protein;protein_id=WP_221072035.1;transl_table=11 NZ_AP024166.1 RefSeq gene 683380 684135 . - . ID=gene-VA249_RS17505;Name=VA249_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17505;old_locus_tag=VYA_32920 NZ_AP024166.1 Protein Homology CDS 683380 684135 . - 0 ID=cds-WP_221072036.1;Parent=gene-VA249_RS17505;Dbxref=Genbank:WP_221072036.1;Name=WP_221072036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704442.1;locus_tag=VA249_RS17505;product=LamB/YcsF family protein;protein_id=WP_221072036.1;transl_table=11 NZ_AP024166.1 RefSeq gene 684427 686382 . + . ID=gene-VA249_RS17510;Name=VA249_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17510;old_locus_tag=VYA_32930 NZ_AP024166.1 Protein Homology CDS 684427 686382 . + 0 ID=cds-WP_221072048.1;Parent=gene-VA249_RS17510;Dbxref=Genbank:WP_221072048.1;Name=WP_221072048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696680.1;locus_tag=VA249_RS17510;product=diguanylate cyclase;protein_id=WP_221072048.1;transl_table=11 NZ_AP024166.1 RefSeq gene 686436 687452 . + . ID=gene-VA249_RS17515;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=VA249_RS17515;old_locus_tag=VYA_32940 NZ_AP024166.1 Protein Homology CDS 686436 687452 . + 0 ID=cds-WP_221072050.1;Parent=gene-VA249_RS17515;Dbxref=Genbank:WP_221072050.1;Name=WP_221072050.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005386320.1;locus_tag=VA249_RS17515;product=UDP-glucose 4-epimerase GalE;protein_id=WP_221072050.1;transl_table=11 NZ_AP024166.1 RefSeq gene 687793 689931 . - . ID=gene-VA249_RS17520;Name=VA249_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17520;old_locus_tag=VYA_32950 NZ_AP024166.1 Protein Homology CDS 687793 689931 . - 0 ID=cds-WP_221072059.1;Parent=gene-VA249_RS17520;Dbxref=Genbank:WP_221072059.1;Name=WP_221072059.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429656.1;locus_tag=VA249_RS17520;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_221072059.1;transl_table=11 NZ_AP024166.1 RefSeq gene 690155 691042 . + . ID=gene-VA249_RS17525;Name=VA249_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17525;old_locus_tag=VYA_32960 NZ_AP024166.1 Protein Homology CDS 690155 691042 . + 0 ID=cds-WP_221072060.1;Parent=gene-VA249_RS17525;Dbxref=Genbank:WP_221072060.1;Name=WP_221072060.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129373.1;locus_tag=VA249_RS17525;product=LysR family transcriptional regulator;protein_id=WP_221072060.1;transl_table=11 NZ_AP024166.1 RefSeq gene 691228 693861 . - . ID=gene-VA249_RS17530;Name=VA249_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17530;old_locus_tag=VYA_32970 NZ_AP024166.1 Protein Homology CDS 691228 693861 . - 0 ID=cds-WP_221072062.1;Parent=gene-VA249_RS17530;Dbxref=Genbank:WP_221072062.1;Name=WP_221072062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427072.1;locus_tag=VA249_RS17530;product=GNAT family N-acetyltransferase;protein_id=WP_221072062.1;transl_table=11 NZ_AP024166.1 RefSeq gene 694098 694664 . + . ID=gene-VA249_RS17535;Name=VA249_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17535;old_locus_tag=VYA_32980 NZ_AP024166.1 Protein Homology CDS 694098 694664 . + 0 ID=cds-WP_221072064.1;Parent=gene-VA249_RS17535;Dbxref=Genbank:WP_221072064.1;Name=WP_221072064.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005390018.1;locus_tag=VA249_RS17535;product=SPOR domain-containing protein;protein_id=WP_221072064.1;transl_table=11 NZ_AP024166.1 RefSeq gene 694814 695803 . + . ID=gene-VA249_RS17540;Name=VA249_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17540;old_locus_tag=VYA_32990 NZ_AP024166.1 Protein Homology CDS 694814 695803 . + 0 ID=cds-WP_221072066.1;Parent=gene-VA249_RS17540;Dbxref=Genbank:WP_221072066.1;Name=WP_221072066.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696674.1;locus_tag=VA249_RS17540;product=D-alanine--D-alanine ligase;protein_id=WP_221072066.1;transl_table=11 NZ_AP024166.1 RefSeq gene 695943 696332 . + . ID=gene-VA249_RS17545;Name=VA249_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17545;old_locus_tag=VYA_33000 NZ_AP024166.1 Protein Homology CDS 695943 696332 . + 0 ID=cds-WP_211917268.1;Parent=gene-VA249_RS17545;Dbxref=Genbank:WP_211917268.1;Name=WP_211917268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451794.1;locus_tag=VA249_RS17545;product=DUF3319 domain-containing protein;protein_id=WP_211917268.1;transl_table=11 NZ_AP024166.1 RefSeq gene 696337 696648 . + . ID=gene-VA249_RS17550;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=VA249_RS17550;old_locus_tag=VYA_33010 NZ_AP024166.1 Protein Homology CDS 696337 696648 . + 0 ID=cds-WP_211917266.1;Parent=gene-VA249_RS17550;Dbxref=Genbank:WP_211917266.1;Name=WP_211917266.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004738001.1;locus_tag=VA249_RS17550;product=stress response translation initiation inhibitor YciH;protein_id=WP_211917266.1;transl_table=11 NZ_AP024166.1 RefSeq gene 697704 703091 . + . ID=gene-VA249_RS17555;Name=VA249_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17555;old_locus_tag=VYA_33020 NZ_AP024166.1 GeneMarkS-2+ CDS 697704 703091 . + 0 ID=cds-WP_221072068.1;Parent=gene-VA249_RS17555;Dbxref=Genbank:WP_221072068.1;Name=WP_221072068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS17555;product=hypothetical protein;protein_id=WP_221072068.1;transl_table=11 NZ_AP024166.1 RefSeq gene 703535 704685 . + . ID=gene-VA249_RS17560;Name=VA249_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17560 NZ_AP024166.1 Protein Homology CDS 703535 703772 . + 0 ID=cds-WP_221069358.1-3;Parent=gene-VA249_RS17560;Dbxref=Genbank:WP_221069358.1;Name=WP_221069358.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=VA249_RS17560;product=IS3 family transposase;protein_id=WP_221069358.1;transl_table=11 NZ_AP024166.1 Protein Homology CDS 703772 704685 . + 2 ID=cds-WP_221069358.1-3;Parent=gene-VA249_RS17560;Dbxref=Genbank:WP_221069358.1;Name=WP_221069358.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=VA249_RS17560;product=IS3 family transposase;protein_id=WP_221069358.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 704708 705532 . + . ID=gene-VA249_RS24135;Name=VA249_RS24135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24135;partial=true;pseudo=true;start_range=.,704708 NZ_AP024166.1 Protein Homology CDS 704708 705532 . + 0 ID=cds-VA249_RS24135;Parent=gene-VA249_RS24135;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006646698.1;locus_tag=VA249_RS24135;partial=true;product=diguanylate cyclase;pseudo=true;start_range=.,704708;transl_table=11 NZ_AP024166.1 RefSeq gene 706692 707066 . + . ID=gene-VA249_RS17570;Name=VA249_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17570;old_locus_tag=VYA_33070 NZ_AP024166.1 GeneMarkS-2+ CDS 706692 707066 . + 0 ID=cds-WP_221072072.1;Parent=gene-VA249_RS17570;Dbxref=Genbank:WP_221072072.1;Name=WP_221072072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS17570;product=hypothetical protein;protein_id=WP_221072072.1;transl_table=11 NZ_AP024166.1 RefSeq gene 707915 708070 . - . ID=gene-VA249_RS17575;Name=VA249_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17575;old_locus_tag=VYA_33080 NZ_AP024166.1 Protein Homology CDS 707915 708070 . - 0 ID=cds-WP_128812907.1;Parent=gene-VA249_RS17575;Dbxref=Genbank:WP_128812907.1;Name=WP_128812907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152125.1;locus_tag=VA249_RS17575;product=YoaH family protein;protein_id=WP_128812907.1;transl_table=11 NZ_AP024166.1 RefSeq gene 708113 709234 . - . ID=gene-VA249_RS17580;Name=VA249_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17580;old_locus_tag=VYA_33090 NZ_AP024166.1 Protein Homology CDS 708113 709234 . - 0 ID=cds-WP_221072074.1;Parent=gene-VA249_RS17580;Dbxref=Genbank:WP_221072074.1;Name=WP_221072074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196889.1;locus_tag=VA249_RS17580;product=conjugal transfer protein TraF;protein_id=WP_221072074.1;transl_table=11 NZ_AP024166.1 RefSeq gene 709294 710175 . - . ID=gene-VA249_RS17585;Name=VA249_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17585;old_locus_tag=VYA_33100 NZ_AP024166.1 Protein Homology CDS 709294 710175 . - 0 ID=cds-WP_128812909.1;Parent=gene-VA249_RS17585;Dbxref=Genbank:WP_128812909.1;Name=WP_128812909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435171.1;locus_tag=VA249_RS17585;product=DUF2861 family protein;protein_id=WP_128812909.1;transl_table=11 NZ_AP024166.1 RefSeq gene 710184 710846 . - . ID=gene-VA249_RS17590;Name=VA249_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17590;old_locus_tag=VYA_33110 NZ_AP024166.1 Protein Homology CDS 710184 710846 . - 0 ID=cds-WP_128812910.1;Parent=gene-VA249_RS17590;Dbxref=Genbank:WP_128812910.1;Name=WP_128812910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599733.1;locus_tag=VA249_RS17590;product=response regulator transcription factor;protein_id=WP_128812910.1;transl_table=11 NZ_AP024166.1 RefSeq gene 710821 712275 . - . ID=gene-VA249_RS17595;Name=VA249_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17595;old_locus_tag=VYA_33120 NZ_AP024166.1 Protein Homology CDS 710821 712275 . - 0 ID=cds-WP_221072076.1;Parent=gene-VA249_RS17595;Dbxref=Genbank:WP_221072076.1;Name=WP_221072076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005498881.1;locus_tag=VA249_RS17595;product=HAMP domain-containing histidine kinase;protein_id=WP_221072076.1;transl_table=11 NZ_AP024166.1 RefSeq gene 712476 713870 . - . ID=gene-VA249_RS17600;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=VA249_RS17600;old_locus_tag=VYA_33130 NZ_AP024166.1 Protein Homology CDS 712476 713870 . - 0 ID=cds-WP_221072078.1;Parent=gene-VA249_RS17600;Dbxref=Genbank:WP_221072078.1;Name=WP_221072078.1;Ontology_term=GO:0008750,GO:0050661,GO:0016021;gbkey=CDS;gene=pntB;go_component=integral component of membrane|0016021||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234219.1;locus_tag=VA249_RS17600;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_221072078.1;transl_table=11 NZ_AP024166.1 RefSeq gene 713883 715439 . - . ID=gene-VA249_RS17605;Name=VA249_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17605;old_locus_tag=VYA_33140 NZ_AP024166.1 Protein Homology CDS 713883 715439 . - 0 ID=cds-WP_221072079.1;Parent=gene-VA249_RS17605;Dbxref=Genbank:WP_221072079.1;Name=WP_221072079.1;Ontology_term=GO:1902600,GO:0008746;gbkey=CDS;go_function=NAD(P)+ transhydrogenase activity|0008746||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011081279.1;locus_tag=VA249_RS17605;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_221072079.1;transl_table=11 NZ_AP024166.1 RefSeq gene 715811 716092 . - . ID=gene-VA249_RS17610;Name=VA249_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17610;old_locus_tag=VYA_33150 NZ_AP024166.1 Protein Homology CDS 715811 716092 . - 0 ID=cds-WP_221072081.1;Parent=gene-VA249_RS17610;Dbxref=Genbank:WP_221072081.1;Name=WP_221072081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451768.1;locus_tag=VA249_RS17610;product=HlyU family transcriptional regulator;protein_id=WP_221072081.1;transl_table=11 NZ_AP024166.1 RefSeq gene 716136 716504 . - . ID=gene-VA249_RS17615;Name=VA249_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17615;old_locus_tag=VYA_33160 NZ_AP024166.1 Protein Homology CDS 716136 716504 . - 0 ID=cds-WP_221072083.1;Parent=gene-VA249_RS17615;Dbxref=Genbank:WP_221072083.1;Name=WP_221072083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644148.1;locus_tag=VA249_RS17615;product=late competence development ComFB family protein;protein_id=WP_221072083.1;transl_table=11 NZ_AP024166.1 RefSeq gene 716765 718009 . + . ID=gene-VA249_RS17620;Name=VA249_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17620;old_locus_tag=VYA_33170 NZ_AP024166.1 Protein Homology CDS 716765 718009 . + 0 ID=cds-WP_221072086.1;Parent=gene-VA249_RS17620;Dbxref=Genbank:WP_221072086.1;Name=WP_221072086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446873.1;locus_tag=VA249_RS17620;product=GGDEF domain-containing protein;protein_id=WP_221072086.1;transl_table=11 NZ_AP024166.1 RefSeq gene 718078 719052 . - . ID=gene-VA249_RS17625;Name=VA249_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17625;old_locus_tag=VYA_33180 NZ_AP024166.1 Protein Homology CDS 718078 719052 . - 0 ID=cds-WP_221072087.1;Parent=gene-VA249_RS17625;Dbxref=Genbank:WP_221072087.1;Name=WP_221072087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451762.1;locus_tag=VA249_RS17625;product=Solitary outer membrane autotransporter beta-barrel domain;protein_id=WP_221072087.1;transl_table=11 NZ_AP024166.1 RefSeq gene 719199 719345 . + . ID=gene-VA249_RS17630;Name=VA249_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17630 NZ_AP024166.1 GeneMarkS-2+ CDS 719199 719345 . + 0 ID=cds-WP_221072090.1;Parent=gene-VA249_RS17630;Dbxref=Genbank:WP_221072090.1;Name=WP_221072090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS17630;product=hypothetical protein;protein_id=WP_221072090.1;transl_table=11 NZ_AP024166.1 RefSeq gene 719401 720372 . - . ID=gene-VA249_RS17635;Name=VA249_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17635;old_locus_tag=VYA_33200 NZ_AP024166.1 Protein Homology CDS 719401 720372 . - 0 ID=cds-WP_221072092.1;Parent=gene-VA249_RS17635;Dbxref=Genbank:WP_221072092.1;Name=WP_221072092.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376234.1;locus_tag=VA249_RS17635;product=diguanylate cyclase;protein_id=WP_221072092.1;transl_table=11 NZ_AP024166.1 RefSeq gene 720672 721109 . + . ID=gene-VA249_RS17640;Name=VA249_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17640;old_locus_tag=VYA_33210 NZ_AP024166.1 Protein Homology CDS 720672 721109 . + 0 ID=cds-WP_221072094.1;Parent=gene-VA249_RS17640;Dbxref=Genbank:WP_221072094.1;Name=WP_221072094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008224132.1;locus_tag=VA249_RS17640;product=DUF3069 domain-containing protein;protein_id=WP_221072094.1;transl_table=11 NZ_AP024166.1 RefSeq gene 721189 722295 . - . ID=gene-VA249_RS17645;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=VA249_RS17645;old_locus_tag=VYA_33220 NZ_AP024166.1 Protein Homology CDS 721189 722295 . - 0 ID=cds-WP_221072096.1;Parent=gene-VA249_RS17645;Dbxref=Genbank:WP_221072096.1;Name=WP_221072096.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427142.1;locus_tag=VA249_RS17645;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_221072096.1;transl_table=11 NZ_AP024166.1 RefSeq gene 722295 722981 . - . ID=gene-VA249_RS17650;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=VA249_RS17650;old_locus_tag=VYA_33230 NZ_AP024166.1 Protein Homology CDS 722295 722981 . - 0 ID=cds-WP_221072098.1;Parent=gene-VA249_RS17650;Dbxref=Genbank:WP_221072098.1;Name=WP_221072098.1;Ontology_term=GO:0015689,GO:0015098,GO:0016021;gbkey=CDS;gene=modB;go_component=integral component of membrane|0016021||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334865.1;locus_tag=VA249_RS17650;product=molybdate ABC transporter permease subunit;protein_id=WP_221072098.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 723054 723805 . - . ID=gene-VA249_RS17655;Name=modA;gbkey=Gene;gene=modA;gene_biotype=pseudogene;locus_tag=VA249_RS17655;old_locus_tag=VYA_33250;pseudo=true NZ_AP024166.1 Protein Homology CDS 723054 723805 . - 0 ID=cds-VA249_RS17655;Parent=gene-VA249_RS17655;Note=frameshifted;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644159.1;locus_tag=VA249_RS17655;product=molybdate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_AP024166.1 RefSeq gene 723891 725342 . - . ID=gene-VA249_RS17660;Name=VA249_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17660;old_locus_tag=VYA_33260 NZ_AP024166.1 Protein Homology CDS 723891 725342 . - 0 ID=cds-WP_221072100.1;Parent=gene-VA249_RS17660;Dbxref=Genbank:WP_221072100.1;Name=WP_221072100.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819629.1;locus_tag=VA249_RS17660;product=cobyric acid synthase;protein_id=WP_221072100.1;transl_table=11 NZ_AP024166.1 RefSeq gene 725505 725876 . + . ID=gene-VA249_RS17665;Name=VA249_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17665;old_locus_tag=VYA_33280 NZ_AP024166.1 Protein Homology CDS 725505 725876 . + 0 ID=cds-WP_128812923.1;Parent=gene-VA249_RS17665;Dbxref=Genbank:WP_128812923.1;Name=WP_128812923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535393.1;locus_tag=VA249_RS17665;product=NirD/YgiW/YdeI family stress tolerance protein;protein_id=WP_128812923.1;transl_table=11 NZ_AP024166.1 RefSeq gene 726076 726612 . + . ID=gene-VA249_RS17670;Name=VA249_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17670;old_locus_tag=VYA_33290 NZ_AP024166.1 Protein Homology CDS 726076 726612 . + 0 ID=cds-WP_128812924.1;Parent=gene-VA249_RS17670;Dbxref=Genbank:WP_128812924.1;Name=WP_128812924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644163.1;locus_tag=VA249_RS17670;product=hypothetical protein;protein_id=WP_128812924.1;transl_table=11 NZ_AP024166.1 RefSeq gene 726792 727472 . - . ID=gene-VA249_RS17675;Name=VA249_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17675;old_locus_tag=VYA_33300 NZ_AP024166.1 Protein Homology CDS 726792 727472 . - 0 ID=cds-WP_221072102.1;Parent=gene-VA249_RS17675;Dbxref=Genbank:WP_221072102.1;Name=WP_221072102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644167.1;locus_tag=VA249_RS17675;product=RimK/LysX family protein;protein_id=WP_221072102.1;transl_table=11 NZ_AP024166.1 RefSeq gene 727485 728672 . - . ID=gene-VA249_RS17680;Name=VA249_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17680;old_locus_tag=VYA_33310 NZ_AP024166.1 Protein Homology CDS 727485 728672 . - 0 ID=cds-WP_221072104.1;Parent=gene-VA249_RS17680;Dbxref=Genbank:WP_221072104.1;Name=WP_221072104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446889.1;locus_tag=VA249_RS17680;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_221072104.1;transl_table=11 NZ_AP024166.1 RefSeq gene 728828 729685 . - . ID=gene-VA249_RS17685;Name=VA249_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17685;old_locus_tag=VYA_33320 NZ_AP024166.1 Protein Homology CDS 728828 729685 . - 0 ID=cds-WP_221072226.1;Parent=gene-VA249_RS17685;Dbxref=Genbank:WP_221072226.1;Name=WP_221072226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446890.1;locus_tag=VA249_RS17685;product=AraC family transcriptional regulator;protein_id=WP_221072226.1;transl_table=11 NZ_AP024166.1 RefSeq gene 729836 731221 . + . ID=gene-VA249_RS17690;Name=VA249_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17690;old_locus_tag=VYA_33330 NZ_AP024166.1 Protein Homology CDS 729836 731221 . + 0 ID=cds-WP_221072106.1;Parent=gene-VA249_RS17690;Dbxref=Genbank:WP_221072106.1;Name=WP_221072106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705379.1;locus_tag=VA249_RS17690;product=MATE family efflux transporter;protein_id=WP_221072106.1;transl_table=11 NZ_AP024166.1 RefSeq gene 731391 731861 . - . ID=gene-VA249_RS17695;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=VA249_RS17695;old_locus_tag=VYA_33340 NZ_AP024166.1 Protein Homology CDS 731391 731861 . - 0 ID=cds-WP_221072107.1;Parent=gene-VA249_RS17695;Dbxref=Genbank:WP_221072107.1;Name=WP_221072107.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435220.1;locus_tag=VA249_RS17695;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_221072107.1;transl_table=11 NZ_AP024166.1 RefSeq gene 731946 734066 . - . ID=gene-VA249_RS17700;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=VA249_RS17700;old_locus_tag=VYA_33350 NZ_AP024166.1 Protein Homology CDS 731946 734066 . - 0 ID=cds-WP_221072109.1;Parent=gene-VA249_RS17700;Dbxref=Genbank:WP_221072109.1;Name=WP_221072109.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019275881.1;locus_tag=VA249_RS17700;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_221072109.1;transl_table=11 NZ_AP024166.1 RefSeq gene 734375 735238 . + . ID=gene-VA249_RS17705;Name=VA249_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17705;old_locus_tag=VYA_33360 NZ_AP024166.1 Protein Homology CDS 734375 735238 . + 0 ID=cds-WP_221072111.1;Parent=gene-VA249_RS17705;Dbxref=Genbank:WP_221072111.1;Name=WP_221072111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446894.1;locus_tag=VA249_RS17705;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_221072111.1;transl_table=11 NZ_AP024166.1 RefSeq gene 735252 735677 . - . ID=gene-VA249_RS17710;Name=VA249_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17710;old_locus_tag=VYA_33370 NZ_AP024166.1 Protein Homology CDS 735252 735677 . - 0 ID=cds-WP_164837299.1;Parent=gene-VA249_RS17710;Dbxref=Genbank:WP_164837299.1;Name=WP_164837299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446895.1;locus_tag=VA249_RS17710;product=YeeE/YedE family protein;protein_id=WP_164837299.1;transl_table=11 NZ_AP024166.1 RefSeq gene 735677 736078 . - . ID=gene-VA249_RS17715;Name=VA249_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17715;old_locus_tag=VYA_33380 NZ_AP024166.1 Protein Homology CDS 735677 736078 . - 0 ID=cds-WP_221072113.1;Parent=gene-VA249_RS17715;Dbxref=Genbank:WP_221072113.1;Name=WP_221072113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446896.1;locus_tag=VA249_RS17715;product=YeeE/YedE thiosulfate transporter family protein;protein_id=WP_221072113.1;transl_table=11 NZ_AP024166.1 RefSeq gene 736105 736398 . - . ID=gene-VA249_RS17720;Name=VA249_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17720;old_locus_tag=VYA_33390 NZ_AP024166.1 Protein Homology CDS 736105 736398 . - 0 ID=cds-WP_211917202.1;Parent=gene-VA249_RS17720;Dbxref=Genbank:WP_211917202.1;Name=WP_211917202.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536098.1;locus_tag=VA249_RS17720;product=ArsR family transcriptional regulator;protein_id=WP_211917202.1;transl_table=11 NZ_AP024166.1 RefSeq gene 736550 738253 . + . ID=gene-VA249_RS17725;Name=VA249_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17725;old_locus_tag=VYA_33400 NZ_AP024166.1 Protein Homology CDS 736550 738253 . + 0 ID=cds-WP_221072122.1;Parent=gene-VA249_RS17725;Dbxref=Genbank:WP_221072122.1;Name=WP_221072122.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334850.1;locus_tag=VA249_RS17725;product=FAD-dependent oxidoreductase;protein_id=WP_221072122.1;transl_table=11 NZ_AP024166.1 RefSeq gene 738489 739715 . - . ID=gene-VA249_RS17730;Name=VA249_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17730;old_locus_tag=VYA_33410 NZ_AP024166.1 Protein Homology CDS 738489 739715 . - 0 ID=cds-WP_221072123.1;Parent=gene-VA249_RS17730;Dbxref=Genbank:WP_221072123.1;Name=WP_221072123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451736.1;locus_tag=VA249_RS17730;product=carbohydrate porin;protein_id=WP_221072123.1;transl_table=11 NZ_AP024166.1 RefSeq gene 739834 740463 . - . ID=gene-VA249_RS17735;Name=VA249_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17735;old_locus_tag=VYA_33420 NZ_AP024166.1 Protein Homology CDS 739834 740463 . - 0 ID=cds-WP_221072125.1;Parent=gene-VA249_RS17735;Dbxref=Genbank:WP_221072125.1;Name=WP_221072125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705370.1;locus_tag=VA249_RS17735;product=DUF3299 domain-containing protein;protein_id=WP_221072125.1;transl_table=11 NZ_AP024166.1 RefSeq gene 740530 741861 . - . ID=gene-VA249_RS17740;Name=VA249_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17740;old_locus_tag=VYA_33430 NZ_AP024166.1 Protein Homology CDS 740530 741861 . - 0 ID=cds-WP_221072126.1;Parent=gene-VA249_RS17740;Dbxref=Genbank:WP_221072126.1;Name=WP_221072126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196868.1;locus_tag=VA249_RS17740;product=amidohydrolase family protein;protein_id=WP_221072126.1;transl_table=11 NZ_AP024166.1 RefSeq gene 742104 743120 . - . ID=gene-VA249_RS17745;Name=VA249_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17745;old_locus_tag=VYA_33440 NZ_AP024166.1 Protein Homology CDS 742104 743120 . - 0 ID=cds-WP_221072128.1;Parent=gene-VA249_RS17745;Dbxref=Genbank:WP_221072128.1;Name=WP_221072128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705368.1;locus_tag=VA249_RS17745;product=helix-turn-helix transcriptional regulator;protein_id=WP_221072128.1;transl_table=11 NZ_AP024166.1 RefSeq gene 743185 743649 . - . ID=gene-VA249_RS17750;Name=VA249_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17750;old_locus_tag=VYA_33450 NZ_AP024166.1 Protein Homology CDS 743185 743649 . - 0 ID=cds-WP_221072130.1;Parent=gene-VA249_RS17750;Dbxref=Genbank:WP_221072130.1;Name=WP_221072130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196866.1;locus_tag=VA249_RS17750;product=hypothetical protein;protein_id=WP_221072130.1;transl_table=11 NZ_AP024166.1 RefSeq gene 743695 744195 . - . ID=gene-VA249_RS17755;Name=VA249_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17755;old_locus_tag=VYA_33460 NZ_AP024166.1 Protein Homology CDS 743695 744195 . - 0 ID=cds-WP_225927152.1;Parent=gene-VA249_RS17755;Dbxref=Genbank:WP_225927152.1;Name=WP_225927152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196865.1;locus_tag=VA249_RS17755;product=hypothetical protein;protein_id=WP_225927152.1;transl_table=11 NZ_AP024166.1 RefSeq gene 744198 744653 . - . ID=gene-VA249_RS17760;Name=VA249_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17760;old_locus_tag=VYA_33470 NZ_AP024166.1 Protein Homology CDS 744198 744653 . - 0 ID=cds-WP_221072132.1;Parent=gene-VA249_RS17760;Dbxref=Genbank:WP_221072132.1;Name=WP_221072132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006071410.1;locus_tag=VA249_RS17760;product=hypothetical protein;protein_id=WP_221072132.1;transl_table=11 NZ_AP024166.1 RefSeq gene 744657 744998 . - . ID=gene-VA249_RS17765;Name=VA249_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17765;old_locus_tag=VYA_33480 NZ_AP024166.1 Protein Homology CDS 744657 744998 . - 0 ID=cds-WP_221072134.1;Parent=gene-VA249_RS17765;Dbxref=Genbank:WP_221072134.1;Name=WP_221072134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196863.1;locus_tag=VA249_RS17765;product=hypothetical protein;protein_id=WP_221072134.1;transl_table=11 NZ_AP024166.1 RefSeq gene 745185 745859 . - . ID=gene-VA249_RS17770;Name=VA249_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17770;old_locus_tag=VYA_33490 NZ_AP024166.1 Protein Homology CDS 745185 745859 . - 0 ID=cds-WP_221072136.1;Parent=gene-VA249_RS17770;Dbxref=Genbank:WP_221072136.1;Name=WP_221072136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016768305.1;locus_tag=VA249_RS17770;product=ion channel;protein_id=WP_221072136.1;transl_table=11 NZ_AP024166.1 RefSeq gene 745856 746965 . - . ID=gene-VA249_RS17775;Name=VA249_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17775;old_locus_tag=VYA_33500 NZ_AP024166.1 Protein Homology CDS 745856 746965 . - 0 ID=cds-WP_221072138.1;Parent=gene-VA249_RS17775;Dbxref=Genbank:WP_221072138.1;Name=WP_221072138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017032349.1;locus_tag=VA249_RS17775;product=AI-2E family transporter;protein_id=WP_221072138.1;transl_table=11 NZ_AP024166.1 RefSeq gene 746993 748006 . - . ID=gene-VA249_RS17780;Name=VA249_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17780;old_locus_tag=VYA_33510 NZ_AP024166.1 Protein Homology CDS 746993 748006 . - 0 ID=cds-WP_221072149.1;Parent=gene-VA249_RS17780;Dbxref=Genbank:WP_221072149.1;Name=WP_221072149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196857.1;locus_tag=VA249_RS17780;product=DUF2955 domain-containing protein;protein_id=WP_221072149.1;transl_table=11 NZ_AP024166.1 RefSeq gene 747996 749117 . - . ID=gene-VA249_RS17785;Name=VA249_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17785;old_locus_tag=VYA_33520 NZ_AP024166.1 Protein Homology CDS 747996 749117 . - 0 ID=cds-WP_221072153.1;Parent=gene-VA249_RS17785;Dbxref=Genbank:WP_221072153.1;Name=WP_221072153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427157.1;locus_tag=VA249_RS17785;product=HlyD family secretion protein;protein_id=WP_221072153.1;transl_table=11 NZ_AP024166.1 RefSeq gene 749297 750307 . + . ID=gene-VA249_RS17790;Name=VA249_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17790;old_locus_tag=VYA_33530 NZ_AP024166.1 Protein Homology CDS 749297 750307 . + 0 ID=cds-WP_221072154.1;Parent=gene-VA249_RS17790;Dbxref=Genbank:WP_221072154.1;Name=WP_221072154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427160.1;locus_tag=VA249_RS17790;product=AraC family transcriptional regulator;protein_id=WP_221072154.1;transl_table=11 NZ_AP024166.1 RefSeq gene 750880 752145 . + . ID=gene-VA249_RS17795;Name=VA249_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17795;old_locus_tag=VYA_33540 NZ_AP024166.1 Protein Homology CDS 750880 752145 . + 0 ID=cds-WP_221072155.1;Parent=gene-VA249_RS17795;Dbxref=Genbank:WP_221072155.1;Name=WP_221072155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427148.1;locus_tag=VA249_RS17795;product=hydroxymethylglutaryl-CoA reductase;protein_id=WP_221072155.1;transl_table=11 NZ_AP024166.1 RefSeq gene 752258 753343 . - . ID=gene-VA249_RS17800;Name=VA249_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17800;old_locus_tag=VYA_33550 NZ_AP024166.1 Protein Homology CDS 752258 753343 . - 0 ID=cds-WP_221072157.1;Parent=gene-VA249_RS17800;Dbxref=Genbank:WP_221072157.1;Name=WP_221072157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008075922.1;locus_tag=VA249_RS17800;product=ketoacyl-ACP synthase III;protein_id=WP_221072157.1;transl_table=11 NZ_AP024166.1 RefSeq gene 753510 753944 . + . ID=gene-VA249_RS17805;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=VA249_RS17805;old_locus_tag=VYA_33560 NZ_AP024166.1 Protein Homology CDS 753510 753944 . + 0 ID=cds-WP_221072159.1;Parent=gene-VA249_RS17805;Dbxref=Genbank:WP_221072159.1;Name=WP_221072159.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644202.1;locus_tag=VA249_RS17805;product=thioredoxin TrxC;protein_id=WP_221072159.1;transl_table=11 NZ_AP024166.1 RefSeq gene 754121 755281 . + . ID=gene-VA249_RS17810;Name=VA249_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17810;old_locus_tag=VYA_33570 NZ_AP024166.1 Protein Homology CDS 754121 755281 . + 0 ID=cds-WP_221072161.1;Parent=gene-VA249_RS17810;Dbxref=Genbank:WP_221072161.1;Name=WP_221072161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819648.1;locus_tag=VA249_RS17810;product=MFS transporter;protein_id=WP_221072161.1;transl_table=11 NZ_AP024166.1 RefSeq gene 755330 755716 . - . ID=gene-VA249_RS17815;Name=VA249_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17815;old_locus_tag=VYA_33580 NZ_AP024166.1 Protein Homology CDS 755330 755716 . - 0 ID=cds-WP_221072163.1;Parent=gene-VA249_RS17815;Dbxref=Genbank:WP_221072163.1;Name=WP_221072163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005387988.1;locus_tag=VA249_RS17815;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_221072163.1;transl_table=11 NZ_AP024166.1 RefSeq gene 755798 756307 . - . ID=gene-VA249_RS17820;Name=VA249_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17820;old_locus_tag=VYA_33590 NZ_AP024166.1 Protein Homology CDS 755798 756307 . - 0 ID=cds-WP_221072165.1;Parent=gene-VA249_RS17820;Dbxref=Genbank:WP_221072165.1;Name=WP_221072165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427032.1;locus_tag=VA249_RS17820;product=GNAT family N-acetyltransferase;protein_id=WP_221072165.1;transl_table=11 NZ_AP024166.1 RefSeq gene 756380 756574 . + . ID=gene-VA249_RS17825;Name=VA249_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17825;old_locus_tag=VYA_33600 NZ_AP024166.1 Protein Homology CDS 756380 756574 . + 0 ID=cds-WP_221072167.1;Parent=gene-VA249_RS17825;Dbxref=Genbank:WP_221072167.1;Name=WP_221072167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009705347.1;locus_tag=VA249_RS17825;product=DUF2986 domain-containing protein;protein_id=WP_221072167.1;transl_table=11 NZ_AP024166.1 RefSeq gene 756771 757259 . - . ID=gene-VA249_RS17830;Name=VA249_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17830;old_locus_tag=VYA_33610 NZ_AP024166.1 Protein Homology CDS 756771 757259 . - 0 ID=cds-WP_128812949.1;Parent=gene-VA249_RS17830;Dbxref=Genbank:WP_128812949.1;Name=WP_128812949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696656.1;locus_tag=VA249_RS17830;product=NYN domain-containing protein;protein_id=WP_128812949.1;transl_table=11 NZ_AP024166.1 RefSeq gene 757453 757893 . + . ID=gene-VA249_RS17835;Name=VA249_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17835;old_locus_tag=VYA_33620 NZ_AP024166.1 Protein Homology CDS 757453 757893 . + 0 ID=cds-WP_211917165.1;Parent=gene-VA249_RS17835;Dbxref=Genbank:WP_211917165.1;Name=WP_211917165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820187.1;locus_tag=VA249_RS17835;product=DUF4174 domain-containing protein;protein_id=WP_211917165.1;transl_table=11 NZ_AP024166.1 RefSeq gene 758038 758799 . - . ID=gene-VA249_RS17840;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=VA249_RS17840;old_locus_tag=VYA_33630 NZ_AP024166.1 Protein Homology CDS 758038 758799 . - 0 ID=cds-WP_221072168.1;Parent=gene-VA249_RS17840;Dbxref=Genbank:WP_221072168.1;Name=WP_221072168.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196842.1;locus_tag=VA249_RS17840;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_221072168.1;transl_table=11 NZ_AP024166.1 RefSeq gene 759022 759870 . - . ID=gene-VA249_RS17845;Name=VA249_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17845;old_locus_tag=VYA_33640 NZ_AP024166.1 Protein Homology CDS 759022 759870 . - 0 ID=cds-WP_221072170.1;Parent=gene-VA249_RS17845;Dbxref=Genbank:WP_221072170.1;Name=WP_221072170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005387971.1;locus_tag=VA249_RS17845;product=formate/nitrite transporter family protein;protein_id=WP_221072170.1;transl_table=11 NZ_AP024166.1 RefSeq gene 760055 760378 . - . ID=gene-VA249_RS17850;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=VA249_RS17850;old_locus_tag=VYA_33650 NZ_AP024166.1 Protein Homology CDS 760055 760378 . - 0 ID=cds-WP_221072171.1;Parent=gene-VA249_RS17850;Dbxref=Genbank:WP_221072171.1;Name=WP_221072171.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741877.1;locus_tag=VA249_RS17850;product=nitrite reductase small subunit NirD;protein_id=WP_221072171.1;transl_table=11 NZ_AP024166.1 RefSeq gene 760391 762955 . - . ID=gene-VA249_RS17855;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=VA249_RS17855;old_locus_tag=VYA_33660 NZ_AP024166.1 Protein Homology CDS 760391 762955 . - 0 ID=cds-WP_221072172.1;Parent=gene-VA249_RS17855;Dbxref=Genbank:WP_221072172.1;Name=WP_221072172.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820189.1;locus_tag=VA249_RS17855;product=nitrite reductase large subunit NirB;protein_id=WP_221072172.1;transl_table=11 NZ_AP024166.1 RefSeq gene 763177 764613 . - . ID=gene-VA249_RS17860;Name=VA249_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17860;old_locus_tag=VYA_33670 NZ_AP024166.1 Protein Homology CDS 763177 764613 . - 0 ID=cds-WP_221072173.1;Parent=gene-VA249_RS17860;Dbxref=Genbank:WP_221072173.1;Name=WP_221072173.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427109.1;locus_tag=VA249_RS17860;product=diguanylate cyclase;protein_id=WP_221072173.1;transl_table=11 NZ_AP024166.1 RefSeq gene 764661 765125 . - . ID=gene-VA249_RS17865;Name=VA249_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17865;old_locus_tag=VYA_33680 NZ_AP024166.1 Protein Homology CDS 764661 765125 . - 0 ID=cds-WP_206513229.1;Parent=gene-VA249_RS17865;Dbxref=Genbank:WP_206513229.1;Name=WP_206513229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005427153.1;locus_tag=VA249_RS17865;product=hypothetical protein;protein_id=WP_206513229.1;transl_table=11 NZ_AP024166.1 RefSeq gene 765579 765652 . - . ID=gene-VA249_RS17870;Name=VA249_RS17870;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS17870;old_locus_tag=VYA_t01270 NZ_AP024166.1 tRNAscan-SE tRNA 765579 765652 . - . ID=rna-VA249_RS17870;Parent=gene-VA249_RS17870;anticodon=(pos:complement(765618..765620));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17870;product=tRNA-Cys NZ_AP024166.1 tRNAscan-SE exon 765579 765652 . - . ID=exon-VA249_RS17870-1;Parent=rna-VA249_RS17870;anticodon=(pos:complement(765618..765620));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17870;product=tRNA-Cys NZ_AP024166.1 RefSeq gene 766060 766133 . - . ID=gene-VA249_RS17875;Name=VA249_RS17875;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS17875;old_locus_tag=VYA_t01280 NZ_AP024166.1 tRNAscan-SE tRNA 766060 766133 . - . ID=rna-VA249_RS17875;Parent=gene-VA249_RS17875;anticodon=(pos:complement(766099..766101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17875;product=tRNA-Cys NZ_AP024166.1 tRNAscan-SE exon 766060 766133 . - . ID=exon-VA249_RS17875-1;Parent=rna-VA249_RS17875;anticodon=(pos:complement(766099..766101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17875;product=tRNA-Cys NZ_AP024166.1 RefSeq gene 766175 766261 . - . ID=gene-VA249_RS17880;Name=VA249_RS17880;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS17880;old_locus_tag=VYA_t01290 NZ_AP024166.1 tRNAscan-SE tRNA 766175 766261 . - . ID=rna-VA249_RS17880;Parent=gene-VA249_RS17880;anticodon=(pos:complement(766225..766227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17880;product=tRNA-Leu NZ_AP024166.1 tRNAscan-SE exon 766175 766261 . - . ID=exon-VA249_RS17880-1;Parent=rna-VA249_RS17880;anticodon=(pos:complement(766225..766227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17880;product=tRNA-Leu NZ_AP024166.1 RefSeq gene 766803 766876 . - . ID=gene-VA249_RS17885;Name=VA249_RS17885;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS17885;old_locus_tag=VYA_t01300 NZ_AP024166.1 tRNAscan-SE tRNA 766803 766876 . - . ID=rna-VA249_RS17885;Parent=gene-VA249_RS17885;anticodon=(pos:complement(766842..766844));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17885;product=tRNA-Cys NZ_AP024166.1 tRNAscan-SE exon 766803 766876 . - . ID=exon-VA249_RS17885-1;Parent=rna-VA249_RS17885;anticodon=(pos:complement(766842..766844));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17885;product=tRNA-Cys NZ_AP024166.1 RefSeq gene 766907 766982 . - . ID=gene-VA249_RS17890;Name=VA249_RS17890;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS17890;old_locus_tag=VYA_t01310 NZ_AP024166.1 tRNAscan-SE tRNA 766907 766982 . - . ID=rna-VA249_RS17890;Parent=gene-VA249_RS17890;anticodon=(pos:complement(766947..766949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17890;product=tRNA-Gly NZ_AP024166.1 tRNAscan-SE exon 766907 766982 . - . ID=exon-VA249_RS17890-1;Parent=rna-VA249_RS17890;anticodon=(pos:complement(766947..766949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17890;product=tRNA-Gly NZ_AP024166.1 RefSeq gene 767010 767096 . - . ID=gene-VA249_RS17895;Name=VA249_RS17895;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS17895;old_locus_tag=VYA_t01320 NZ_AP024166.1 tRNAscan-SE tRNA 767010 767096 . - . ID=rna-VA249_RS17895;Parent=gene-VA249_RS17895;anticodon=(pos:complement(767060..767062));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17895;product=tRNA-Leu NZ_AP024166.1 tRNAscan-SE exon 767010 767096 . - . ID=exon-VA249_RS17895-1;Parent=rna-VA249_RS17895;anticodon=(pos:complement(767060..767062));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17895;product=tRNA-Leu NZ_AP024166.1 RefSeq gene 767426 768214 . + . ID=gene-VA249_RS17900;Name=VA249_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17900;old_locus_tag=VYA_33690 NZ_AP024166.1 Protein Homology CDS 767426 768214 . + 0 ID=cds-WP_221072228.1;Parent=gene-VA249_RS17900;Dbxref=Genbank:WP_221072228.1;Name=WP_221072228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019829275.1;locus_tag=VA249_RS17900;product=lipase;protein_id=WP_221072228.1;transl_table=11 NZ_AP024166.1 RefSeq gene 768357 768602 . - . ID=gene-VA249_RS17905;Name=VA249_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17905;old_locus_tag=VYA_33700 NZ_AP024166.1 Protein Homology CDS 768357 768602 . - 0 ID=cds-WP_128812957.1;Parent=gene-VA249_RS17905;Dbxref=Genbank:WP_128812957.1;Name=WP_128812957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451657.1;locus_tag=VA249_RS17905;product=nitrite reductase;protein_id=WP_128812957.1;transl_table=11 NZ_AP024166.1 RefSeq gene 768737 770443 . - . ID=gene-VA249_RS17910;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=VA249_RS17910;old_locus_tag=VYA_33710 NZ_AP024166.1 Protein Homology CDS 768737 770443 . - 0 ID=cds-WP_221072174.1;Parent=gene-VA249_RS17910;Dbxref=Genbank:WP_221072174.1;Name=WP_221072174.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447492.1;locus_tag=VA249_RS17910;product=D-lactate dehydrogenase;protein_id=WP_221072174.1;transl_table=11 NZ_AP024166.1 RefSeq gene 770837 770910 . - . ID=gene-VA249_RS17915;Name=VA249_RS17915;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS17915;old_locus_tag=VYA_t01330 NZ_AP024166.1 tRNAscan-SE tRNA 770837 770910 . - . ID=rna-VA249_RS17915;Parent=gene-VA249_RS17915;anticodon=(pos:complement(770876..770878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17915;product=tRNA-Cys NZ_AP024166.1 tRNAscan-SE exon 770837 770910 . - . ID=exon-VA249_RS17915-1;Parent=rna-VA249_RS17915;anticodon=(pos:complement(770876..770878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS17915;product=tRNA-Cys NZ_AP024166.1 RefSeq gene 771066 772520 . - . ID=gene-VA249_RS17920;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=VA249_RS17920;old_locus_tag=VYA_33720 NZ_AP024166.1 Protein Homology CDS 771066 772520 . - 0 ID=cds-WP_221071840.1;Parent=gene-VA249_RS17920;Dbxref=Genbank:WP_221071840.1;Name=WP_221071840.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532110.1;locus_tag=VA249_RS17920;product=ATPase RavA stimulator ViaA;protein_id=WP_221071840.1;transl_table=11 NZ_AP024166.1 RefSeq gene 772530 774191 . - . ID=gene-VA249_RS17925;Name=VA249_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17925;old_locus_tag=VYA_33730 NZ_AP024166.1 Protein Homology CDS 772530 774191 . - 0 ID=cds-WP_211917139.1;Parent=gene-VA249_RS17925;Dbxref=Genbank:WP_211917139.1;Name=WP_211917139.1;Ontology_term=GO:0042626;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443813.1;locus_tag=VA249_RS17925;product=DUF3763 domain-containing protein;protein_id=WP_211917139.1;transl_table=11 NZ_AP024166.1 RefSeq gene 774463 774978 . + . ID=gene-VA249_RS17930;Name=VA249_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17930;old_locus_tag=VYA_33740 NZ_AP024166.1 Protein Homology CDS 774463 774978 . + 0 ID=cds-WP_221072175.1;Parent=gene-VA249_RS17930;Dbxref=Genbank:WP_221072175.1;Name=WP_221072175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313291.1;locus_tag=VA249_RS17930;product=NUDIX hydrolase;protein_id=WP_221072175.1;transl_table=11 NZ_AP024166.1 RefSeq gene 775003 776007 . + . ID=gene-VA249_RS17935;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=VA249_RS17935;old_locus_tag=VYA_33750 NZ_AP024166.1 Protein Homology CDS 775003 776007 . + 0 ID=cds-WP_128812962.1;Parent=gene-VA249_RS17935;Dbxref=Genbank:WP_128812962.1;Name=WP_128812962.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532104.1;locus_tag=VA249_RS17935;product=low-specificity L-threonine aldolase;protein_id=WP_128812962.1;transl_table=11 NZ_AP024166.1 RefSeq gene 776211 776540 . + . ID=gene-VA249_RS17940;Name=VA249_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17940;old_locus_tag=VYA_33760 NZ_AP024166.1 Protein Homology CDS 776211 776540 . + 0 ID=cds-WP_128813513.1;Parent=gene-VA249_RS17940;Dbxref=Genbank:WP_128813513.1;Name=WP_128813513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426845.1;locus_tag=VA249_RS17940;product=cytochrome c;protein_id=WP_128813513.1;transl_table=11 NZ_AP024166.1 RefSeq gene 776769 778301 . + . ID=gene-VA249_RS17945;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=VA249_RS17945;old_locus_tag=VYA_33770 NZ_AP024166.1 Protein Homology CDS 776769 778301 . + 0 ID=cds-WP_128812963.1;Parent=gene-VA249_RS17945;Dbxref=Genbank:WP_128812963.1;Name=WP_128812963.1;Ontology_term=GO:0016021;gbkey=CDS;gene=yfcC;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447489.1;locus_tag=VA249_RS17945;product=putative basic amino acid antiporter YfcC;protein_id=WP_128812963.1;transl_table=11 NZ_AP024166.1 RefSeq gene 778480 779475 . + . ID=gene-VA249_RS17950;Name=VA249_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17950;old_locus_tag=VYA_33780 NZ_AP024166.1 Protein Homology CDS 778480 779475 . + 0 ID=cds-WP_221070003.1;Parent=gene-VA249_RS17950;Dbxref=Genbank:WP_221070003.1;Name=WP_221070003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196260.1;locus_tag=VA249_RS17950;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_221070003.1;transl_table=11 NZ_AP024166.1 RefSeq gene 779536 780666 . - . ID=gene-VA249_RS17955;Name=VA249_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17955;old_locus_tag=VYA_33790 NZ_AP024166.1 Protein Homology CDS 779536 780666 . - 0 ID=cds-WP_221070005.1;Parent=gene-VA249_RS17955;Dbxref=Genbank:WP_221070005.1;Name=WP_221070005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005498995.1;locus_tag=VA249_RS17955;product=multidrug effflux MFS transporter;protein_id=WP_221070005.1;transl_table=11 NZ_AP024166.1 RefSeq gene 780804 781583 . + . ID=gene-VA249_RS17960;Name=VA249_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17960;old_locus_tag=VYA_33800 NZ_AP024166.1 Protein Homology CDS 780804 781583 . + 0 ID=cds-WP_225927126.1;Parent=gene-VA249_RS17960;Dbxref=Genbank:WP_225927126.1;Name=WP_225927126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005446985.1;locus_tag=VA249_RS17960;product=helix-turn-helix transcriptional regulator;protein_id=WP_225927126.1;transl_table=11 NZ_AP024166.1 RefSeq gene 782277 782996 . - . ID=gene-VA249_RS17965;Name=VA249_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17965;old_locus_tag=VYA_33820 NZ_AP024166.1 Protein Homology CDS 782277 782996 . - 0 ID=cds-WP_225927127.1;Parent=gene-VA249_RS17965;Dbxref=Genbank:WP_225927127.1;Name=WP_225927127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002539477.1;locus_tag=VA249_RS17965;product=hypothetical protein;protein_id=WP_225927127.1;transl_table=11 NZ_AP024166.1 RefSeq gene 783396 784640 . + . ID=gene-VA249_RS17970;Name=VA249_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17970;old_locus_tag=VYA_33830 NZ_AP024166.1 Protein Homology CDS 783396 784640 . + 0 ID=cds-WP_221070009.1;Parent=gene-VA249_RS17970;Dbxref=Genbank:WP_221070009.1;Name=WP_221070009.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018561.2;locus_tag=VA249_RS17970;product=DUF1254 domain-containing protein;protein_id=WP_221070009.1;transl_table=11 NZ_AP024166.1 RefSeq gene 784803 785753 . + . ID=gene-VA249_RS17975;Name=VA249_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17975;old_locus_tag=VYA_33840 NZ_AP024166.1 Protein Homology CDS 784803 785753 . + 0 ID=cds-WP_221070011.1;Parent=gene-VA249_RS17975;Dbxref=Genbank:WP_221070011.1;Name=WP_221070011.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=VA249_RS17975;product=LysR family transcriptional regulator;protein_id=WP_221070011.1;transl_table=11 NZ_AP024166.1 RefSeq gene 786108 786602 . - . ID=gene-VA249_RS17980;Name=VA249_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17980;old_locus_tag=VYA_33850 NZ_AP024166.1 Protein Homology CDS 786108 786602 . - 0 ID=cds-WP_221070013.1;Parent=gene-VA249_RS17980;Dbxref=Genbank:WP_221070013.1;Name=WP_221070013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005395182.1;locus_tag=VA249_RS17980;product=YcxB family protein;protein_id=WP_221070013.1;transl_table=11 NZ_AP024166.1 RefSeq gene 786857 787117 . - . ID=gene-VA249_RS17985;Name=VA249_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17985;old_locus_tag=VYA_33860 NZ_AP024166.1 Protein Homology CDS 786857 787117 . - 0 ID=cds-WP_128812975.1;Parent=gene-VA249_RS17985;Dbxref=Genbank:WP_128812975.1;Name=WP_128812975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005376453.1;locus_tag=VA249_RS17985;product=DUF5062 family protein;protein_id=WP_128812975.1;transl_table=11 NZ_AP024166.1 RefSeq gene 787394 788779 . + . ID=gene-VA249_RS17990;Name=VA249_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17990;old_locus_tag=VYA_33870 NZ_AP024166.1 GeneMarkS-2+ CDS 787394 788779 . + 0 ID=cds-WP_221070015.1;Parent=gene-VA249_RS17990;Dbxref=Genbank:WP_221070015.1;Name=WP_221070015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS17990;product=hypothetical protein;protein_id=WP_221070015.1;transl_table=11 NZ_AP024166.1 RefSeq gene 788930 790690 . + . ID=gene-VA249_RS17995;Name=VA249_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS17995;old_locus_tag=VYA_33880 NZ_AP024166.1 Protein Homology CDS 788930 790690 . + 0 ID=cds-WP_221070017.1;Parent=gene-VA249_RS17995;Dbxref=Genbank:WP_221070017.1;Name=WP_221070017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451999.1;locus_tag=VA249_RS17995;product=ABC transporter ATP-binding protein/permease;protein_id=WP_221070017.1;transl_table=11 NZ_AP024166.1 RefSeq gene 790855 791307 . - . ID=gene-VA249_RS18000;Name=VA249_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18000;old_locus_tag=VYA_33890 NZ_AP024166.1 Protein Homology CDS 790855 791307 . - 0 ID=cds-WP_221070019.1;Parent=gene-VA249_RS18000;Dbxref=Genbank:WP_221070019.1;Name=WP_221070019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017031611.1;locus_tag=VA249_RS18000;product=exoribonuclease R;protein_id=WP_221070019.1;transl_table=11 NZ_AP024166.1 RefSeq gene 791592 792209 . + . ID=gene-VA249_RS18005;Name=VA249_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18005;old_locus_tag=VYA_33900 NZ_AP024166.1 Protein Homology CDS 791592 792209 . + 0 ID=cds-WP_221070021.1;Parent=gene-VA249_RS18005;Dbxref=Genbank:WP_221070021.1;Name=WP_221070021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447139.1;locus_tag=VA249_RS18005;product=HAD family phosphatase;protein_id=WP_221070021.1;transl_table=11 NZ_AP024166.1 RefSeq gene 792240 792431 . - . ID=gene-VA249_RS18010;Name=VA249_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18010;old_locus_tag=VYA_33910 NZ_AP024166.1 Protein Homology CDS 792240 792431 . - 0 ID=cds-WP_128812978.1;Parent=gene-VA249_RS18010;Dbxref=Genbank:WP_128812978.1;Name=WP_128812978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447081.1;locus_tag=VA249_RS18010;product=hypothetical protein;protein_id=WP_128812978.1;transl_table=11 NZ_AP024166.1 RefSeq gene 792637 793329 . - . ID=gene-VA249_RS18015;Name=VA249_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18015;old_locus_tag=VYA_33920 NZ_AP024166.1 Protein Homology CDS 792637 793329 . - 0 ID=cds-WP_221070022.1;Parent=gene-VA249_RS18015;Dbxref=Genbank:WP_221070022.1;Name=WP_221070022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452035.1;locus_tag=VA249_RS18015;product=glutathione S-transferase;protein_id=WP_221070022.1;transl_table=11 NZ_AP024166.1 RefSeq gene 793569 793961 . + . ID=gene-VA249_RS18020;Name=VA249_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18020 NZ_AP024166.1 Protein Homology CDS 793569 793961 . + 0 ID=cds-WP_221070024.1;Parent=gene-VA249_RS18020;Dbxref=Genbank:WP_221070024.1;Name=WP_221070024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005395186.1;locus_tag=VA249_RS18020;product=hypothetical protein;protein_id=WP_221070024.1;transl_table=11 NZ_AP024166.1 RefSeq gene 793973 794977 . - . ID=gene-VA249_RS18025;Name=VA249_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18025;old_locus_tag=VYA_33930 NZ_AP024166.1 Protein Homology CDS 793973 794977 . - 0 ID=cds-WP_221070026.1;Parent=gene-VA249_RS18025;Dbxref=Genbank:WP_221070026.1;Name=WP_221070026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196325.1;locus_tag=VA249_RS18025;product=metal-dependent hydrolase;protein_id=WP_221070026.1;transl_table=11 NZ_AP024166.1 RefSeq gene 795350 796951 . + . ID=gene-VA249_RS18030;Name=VA249_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18030;old_locus_tag=VYA_33940 NZ_AP024166.1 Protein Homology CDS 795350 796951 . + 0 ID=cds-WP_221070028.1;Parent=gene-VA249_RS18030;Dbxref=Genbank:WP_221070028.1;Name=WP_221070028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697210.1;locus_tag=VA249_RS18030;product=long-chain fatty acid--CoA ligase;protein_id=WP_221070028.1;transl_table=11 NZ_AP024166.1 RefSeq gene 797045 797506 . - . ID=gene-VA249_RS18035;Name=VA249_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18035;old_locus_tag=VYA_33950 NZ_AP024166.1 Protein Homology CDS 797045 797506 . - 0 ID=cds-WP_221070030.1;Parent=gene-VA249_RS18035;Dbxref=Genbank:WP_221070030.1;Name=WP_221070030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017093769.1;locus_tag=VA249_RS18035;product=DUF3291 domain-containing protein;protein_id=WP_221070030.1;transl_table=11 NZ_AP024166.1 RefSeq gene 797666 798058 . - . ID=gene-VA249_RS18040;Name=VA249_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18040;old_locus_tag=VYA_33960 NZ_AP024166.1 GeneMarkS-2+ CDS 797666 798058 . - 0 ID=cds-WP_221070031.1;Parent=gene-VA249_RS18040;Dbxref=Genbank:WP_221070031.1;Name=WP_221070031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18040;product=hypothetical protein;protein_id=WP_221070031.1;transl_table=11 NZ_AP024166.1 RefSeq gene 798270 799223 . + . ID=gene-VA249_RS18045;Name=VA249_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18045;old_locus_tag=VYA_33970 NZ_AP024166.1 Protein Homology CDS 798270 799223 . + 0 ID=cds-WP_221070032.1;Parent=gene-VA249_RS18045;Dbxref=Genbank:WP_221070032.1;Name=WP_221070032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335974.1;locus_tag=VA249_RS18045;product=DUF2860 family protein;protein_id=WP_221070032.1;transl_table=11 NZ_AP024166.1 RefSeq gene 799336 800268 . - . ID=gene-VA249_RS18050;Name=VA249_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18050;old_locus_tag=VYA_33980 NZ_AP024166.1 Protein Homology CDS 799336 800268 . - 0 ID=cds-WP_221070034.1;Parent=gene-VA249_RS18050;Dbxref=Genbank:WP_221070034.1;Name=WP_221070034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335973.1;locus_tag=VA249_RS18050;product=LysR family transcriptional regulator;protein_id=WP_221070034.1;transl_table=11 NZ_AP024166.1 RefSeq gene 800426 801718 . - . ID=gene-VA249_RS18055;Name=VA249_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18055;old_locus_tag=VYA_33990 NZ_AP024166.1 Protein Homology CDS 800426 801718 . - 0 ID=cds-WP_221070036.1;Parent=gene-VA249_RS18055;Dbxref=Genbank:WP_221070036.1;Name=WP_221070036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018352.2;locus_tag=VA249_RS18055;product=MipA/OmpV family protein;protein_id=WP_221070036.1;transl_table=11 NZ_AP024166.1 RefSeq gene 802147 805215 . - . ID=gene-VA249_RS18060;Name=VA249_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18060;old_locus_tag=VYA_34000 NZ_AP024166.1 Protein Homology CDS 802147 805215 . - 0 ID=cds-WP_221070038.1;Parent=gene-VA249_RS18060;Dbxref=Genbank:WP_221070038.1;Name=WP_221070038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017013792.1;locus_tag=VA249_RS18060;product=efflux RND transporter permease subunit;protein_id=WP_221070038.1;transl_table=11 NZ_AP024166.1 RefSeq gene 805217 806302 . - . ID=gene-VA249_RS18065;Name=VA249_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18065;old_locus_tag=VYA_34010 NZ_AP024166.1 Protein Homology CDS 805217 806302 . - 0 ID=cds-WP_221070040.1;Parent=gene-VA249_RS18065;Dbxref=Genbank:WP_221070040.1;Name=WP_221070040.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=VA249_RS18065;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221070040.1;transl_table=11 NZ_AP024166.1 RefSeq gene 806963 808162 . + . ID=gene-VA249_RS18070;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=VA249_RS18070;old_locus_tag=VYA_34030 NZ_AP024166.1 Protein Homology CDS 806963 808162 . + 0 ID=cds-WP_221070042.1;Parent=gene-VA249_RS18070;Dbxref=Genbank:WP_221070042.1;Name=WP_221070042.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003296532.1;locus_tag=VA249_RS18070;product=sodium/glutamate symporter;protein_id=WP_221070042.1;transl_table=11 NZ_AP024166.1 RefSeq gene 808247 809383 . - . ID=gene-VA249_RS18075;Name=VA249_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18075;old_locus_tag=VYA_34040 NZ_AP024166.1 Protein Homology CDS 808247 809383 . - 0 ID=cds-WP_221070044.1;Parent=gene-VA249_RS18075;Dbxref=Genbank:WP_221070044.1;Name=WP_221070044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818753.1;locus_tag=VA249_RS18075;product=AI-2E family transporter;protein_id=WP_221070044.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 809740 811208 . + . ID=gene-VA249_RS18080;Name=VA249_RS18080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS18080;old_locus_tag=VYA_34050;pseudo=true NZ_AP024166.1 Protein Homology CDS 809740 811208 . + 0 ID=cds-VA249_RS18080;Parent=gene-VA249_RS18080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818752.1;locus_tag=VA249_RS18080;product=AGE family epimerase/isomerase;pseudo=true;transl_table=11 NZ_AP024166.1 RefSeq gene 811337 811897 . - . ID=gene-VA249_RS18085;Name=VA249_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18085;old_locus_tag=VYA_34070 NZ_AP024166.1 Protein Homology CDS 811337 811897 . - 0 ID=cds-WP_211917103.1;Parent=gene-VA249_RS18085;Dbxref=Genbank:WP_211917103.1;Name=WP_211917103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818746.1;locus_tag=VA249_RS18085;product=phosphohydrolase;protein_id=WP_211917103.1;transl_table=11 NZ_AP024166.1 RefSeq gene 811965 812225 . - . ID=gene-VA249_RS18090;Name=VA249_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18090;old_locus_tag=VYA_34080 NZ_AP024166.1 Protein Homology CDS 811965 812225 . - 0 ID=cds-WP_211917101.1;Parent=gene-VA249_RS18090;Dbxref=Genbank:WP_211917101.1;Name=WP_211917101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452284.1;locus_tag=VA249_RS18090;product=hypothetical protein;protein_id=WP_211917101.1;transl_table=11 NZ_AP024166.1 RefSeq gene 812478 813092 . - . ID=gene-VA249_RS18095;Name=VA249_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18095;old_locus_tag=VYA_34090 NZ_AP024166.1 Protein Homology CDS 812478 813092 . - 0 ID=cds-WP_221070046.1;Parent=gene-VA249_RS18095;Dbxref=Genbank:WP_221070046.1;Name=WP_221070046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818743.1;locus_tag=VA249_RS18095;product=glutathione S-transferase;protein_id=WP_221070046.1;transl_table=11 NZ_AP024166.1 RefSeq gene 813344 813919 . + . ID=gene-VA249_RS18100;Name=VA249_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18100;old_locus_tag=VYA_34100 NZ_AP024166.1 Protein Homology CDS 813344 813919 . + 0 ID=cds-WP_128812993.1;Parent=gene-VA249_RS18100;Dbxref=Genbank:WP_128812993.1;Name=WP_128812993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005395660.1;locus_tag=VA249_RS18100;product=TetR/AcrR family transcriptional regulator;protein_id=WP_128812993.1;transl_table=11 NZ_AP024166.1 RefSeq gene 813921 814325 . + . ID=gene-VA249_RS18105;Name=VA249_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18105;old_locus_tag=VYA_34110 NZ_AP024166.1 Protein Homology CDS 813921 814325 . + 0 ID=cds-WP_221070048.1;Parent=gene-VA249_RS18105;Dbxref=Genbank:WP_221070048.1;Name=WP_221070048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313323.1;locus_tag=VA249_RS18105;product=DUF296 domain-containing protein;protein_id=WP_221070048.1;transl_table=11 NZ_AP024166.1 RefSeq gene 814422 814757 . - . ID=gene-VA249_RS18110;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=VA249_RS18110;old_locus_tag=VYA_34120 NZ_AP024166.1 Protein Homology CDS 814422 814757 . - 0 ID=cds-WP_221070050.1;Parent=gene-VA249_RS18110;Dbxref=Genbank:WP_221070050.1;Name=WP_221070050.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450077.1;locus_tag=VA249_RS18110;product=nitrite reductase small subunit NirD;protein_id=WP_221070050.1;transl_table=11 NZ_AP024166.1 RefSeq gene 814758 817277 . - . ID=gene-VA249_RS18115;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=VA249_RS18115;old_locus_tag=VYA_34130 NZ_AP024166.1 Protein Homology CDS 814758 817277 . - 0 ID=cds-WP_221070052.1;Parent=gene-VA249_RS18115;Dbxref=Genbank:WP_221070052.1;Name=WP_221070052.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463769.1;locus_tag=VA249_RS18115;product=nitrite reductase large subunit NirB;protein_id=WP_221070052.1;transl_table=11 NZ_AP024166.1 RefSeq gene 817288 818124 . - . ID=gene-VA249_RS18120;Name=VA249_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18120;old_locus_tag=VYA_34140 NZ_AP024166.1 Protein Homology CDS 817288 818124 . - 0 ID=cds-WP_221070054.1;Parent=gene-VA249_RS18120;Dbxref=Genbank:WP_221070054.1;Name=WP_221070054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463767.1;locus_tag=VA249_RS18120;product=ABC transporter ATP-binding protein;protein_id=WP_221070054.1;transl_table=11 NZ_AP024166.1 RefSeq gene 818136 819101 . - . ID=gene-VA249_RS18125;Name=VA249_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18125;old_locus_tag=VYA_34150 NZ_AP024166.1 Protein Homology CDS 818136 819101 . - 0 ID=cds-WP_221070056.1;Parent=gene-VA249_RS18125;Dbxref=Genbank:WP_221070056.1;Name=WP_221070056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443100.1;locus_tag=VA249_RS18125;product=ABC transporter permease;protein_id=WP_221070056.1;transl_table=11 NZ_AP024166.1 RefSeq gene 819182 820546 . - . ID=gene-VA249_RS18130;Name=VA249_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18130;old_locus_tag=VYA_34160 NZ_AP024166.1 Protein Homology CDS 819182 820546 . - 0 ID=cds-WP_221070059.1;Parent=gene-VA249_RS18130;Dbxref=Genbank:WP_221070059.1;Name=WP_221070059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129220.1;locus_tag=VA249_RS18130;product=ABC transporter substrate-binding protein;protein_id=WP_221070059.1;transl_table=11 NZ_AP024166.1 RefSeq gene 820824 821405 . - . ID=gene-VA249_RS18135;Name=VA249_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18135;old_locus_tag=VYA_34170 NZ_AP024166.1 Protein Homology CDS 820824 821405 . - 0 ID=cds-WP_221070060.1;Parent=gene-VA249_RS18135;Dbxref=Genbank:WP_221070060.1;Name=WP_221070060.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818738.1;locus_tag=VA249_RS18135;product=ANTAR domain-containing protein;protein_id=WP_221070060.1;transl_table=11 NZ_AP024166.1 RefSeq gene 821479 822396 . - . ID=gene-VA249_RS18140;Name=VA249_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18140;old_locus_tag=VYA_34180 NZ_AP024166.1 Protein Homology CDS 821479 822396 . - 0 ID=cds-WP_221070062.1;Parent=gene-VA249_RS18140;Dbxref=Genbank:WP_221070062.1;Name=WP_221070062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005375880.1;locus_tag=VA249_RS18140;product=dienelactone hydrolase family protein;protein_id=WP_221070062.1;transl_table=11 NZ_AP024166.1 RefSeq gene 822624 823577 . - . ID=gene-VA249_RS18145;Name=VA249_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18145;old_locus_tag=VYA_34190 NZ_AP024166.1 Protein Homology CDS 822624 823577 . - 0 ID=cds-WP_221070064.1;Parent=gene-VA249_RS18145;Dbxref=Genbank:WP_221070064.1;Name=WP_221070064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005387581.1;locus_tag=VA249_RS18145;product=glycosyl transferase family protein;protein_id=WP_221070064.1;transl_table=11 NZ_AP024166.1 RefSeq gene 823574 824479 . - . ID=gene-VA249_RS18150;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=VA249_RS18150;old_locus_tag=VYA_34200 NZ_AP024166.1 Protein Homology CDS 823574 824479 . - 0 ID=cds-WP_221070066.1;Parent=gene-VA249_RS18150;Dbxref=Genbank:WP_221070066.1;Name=WP_221070066.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005488059.1;locus_tag=VA249_RS18150;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_221070066.1;transl_table=11 NZ_AP024166.1 RefSeq gene 824501 827164 . - . ID=gene-VA249_RS18155;Name=VA249_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18155;old_locus_tag=VYA_34210 NZ_AP024166.1 Protein Homology CDS 824501 827164 . - 0 ID=cds-WP_221070068.1;Parent=gene-VA249_RS18155;Dbxref=Genbank:WP_221070068.1;Name=WP_221070068.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820236.1;locus_tag=VA249_RS18155;product=nitrate reductase;protein_id=WP_221070068.1;transl_table=11 NZ_AP024166.1 RefSeq gene 827455 827889 . - . ID=gene-VA249_RS18160;Name=VA249_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18160;old_locus_tag=VYA_34220 NZ_AP024166.1 Protein Homology CDS 827455 827889 . - 0 ID=cds-WP_221070070.1;Parent=gene-VA249_RS18160;Dbxref=Genbank:WP_221070070.1;Name=WP_221070070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818733.1;locus_tag=VA249_RS18160;product=GNAT family N-acetyltransferase;protein_id=WP_221070070.1;transl_table=11 NZ_AP024166.1 RefSeq gene 828248 829504 . + . ID=gene-VA249_RS18165;Name=VA249_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18165;old_locus_tag=VYA_34230 NZ_AP024166.1 Protein Homology CDS 828248 829504 . + 0 ID=cds-WP_221070073.1;Parent=gene-VA249_RS18165;Dbxref=Genbank:WP_221070073.1;Name=WP_221070073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190875.1;locus_tag=VA249_RS18165;product=HAAAP family serine/threonine permease;protein_id=WP_221070073.1;transl_table=11 NZ_AP024166.1 RefSeq gene 830051 830386 . + . ID=gene-VA249_RS18170;Name=VA249_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18170;old_locus_tag=VYA_34240 NZ_AP024166.1 Protein Homology CDS 830051 830386 . + 0 ID=cds-WP_221070074.1;Parent=gene-VA249_RS18170;Dbxref=Genbank:WP_221070074.1;Name=WP_221070074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129209.1;locus_tag=VA249_RS18170;product=hypothetical protein;protein_id=WP_221070074.1;transl_table=11 NZ_AP024166.1 RefSeq gene 830642 832420 . + . ID=gene-VA249_RS18175;Name=VA249_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18175;old_locus_tag=VYA_34250 NZ_AP024166.1 Protein Homology CDS 830642 832420 . + 0 ID=cds-WP_221070076.1;Parent=gene-VA249_RS18175;Dbxref=Genbank:WP_221070076.1;Name=WP_221070076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129208.1;locus_tag=VA249_RS18175;product=S8 family serine peptidase;protein_id=WP_221070076.1;transl_table=11 NZ_AP024166.1 RefSeq gene 832433 832879 . + . ID=gene-VA249_RS18180;Name=VA249_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18180;old_locus_tag=VYA_34260 NZ_AP024166.1 Protein Homology CDS 832433 832879 . + 0 ID=cds-WP_221070078.1;Parent=gene-VA249_RS18180;Dbxref=Genbank:WP_221070078.1;Name=WP_221070078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452329.1;locus_tag=VA249_RS18180;product=hypothetical protein;protein_id=WP_221070078.1;transl_table=11 NZ_AP024166.1 RefSeq gene 833029 834318 . - . ID=gene-VA249_RS18185;Name=VA249_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18185;old_locus_tag=VYA_34270 NZ_AP024166.1 Protein Homology CDS 833029 834318 . - 0 ID=cds-WP_221070080.1;Parent=gene-VA249_RS18185;Dbxref=Genbank:WP_221070080.1;Name=WP_221070080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190877.1;locus_tag=VA249_RS18185;product=alkaline phosphatase;protein_id=WP_221070080.1;transl_table=11 NZ_AP024166.1 RefSeq gene 834593 835840 . - . ID=gene-VA249_RS18190;Name=VA249_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18190;old_locus_tag=VYA_34280 NZ_AP024166.1 Protein Homology CDS 834593 835840 . - 0 ID=cds-WP_221070082.1;Parent=gene-VA249_RS18190;Dbxref=Genbank:WP_221070082.1;Name=WP_221070082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017068553.1;locus_tag=VA249_RS18190;product=HAMP domain-containing histidine kinase;protein_id=WP_221070082.1;transl_table=11 NZ_AP024166.1 RefSeq gene 835812 836480 . - . ID=gene-VA249_RS18195;Name=VA249_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18195;old_locus_tag=VYA_34290 NZ_AP024166.1 Protein Homology CDS 835812 836480 . - 0 ID=cds-WP_128813012.1;Parent=gene-VA249_RS18195;Dbxref=Genbank:WP_128813012.1;Name=WP_128813012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452230.1;locus_tag=VA249_RS18195;product=response regulator transcription factor;protein_id=WP_128813012.1;transl_table=11 NZ_AP024166.1 RefSeq gene 836571 837845 . + . ID=gene-VA249_RS18200;Name=VA249_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18200;old_locus_tag=VYA_34300 NZ_AP024166.1 Protein Homology CDS 836571 837845 . + 0 ID=cds-WP_221070084.1;Parent=gene-VA249_RS18200;Dbxref=Genbank:WP_221070084.1;Name=WP_221070084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704614.1;locus_tag=VA249_RS18200;product=DUF5666 domain-containing protein;protein_id=WP_221070084.1;transl_table=11 NZ_AP024166.1 RefSeq gene 837950 838288 . + . ID=gene-VA249_RS18205;Name=VA249_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18205;old_locus_tag=VYA_34310 NZ_AP024166.1 Protein Homology CDS 837950 838288 . + 0 ID=cds-WP_225927128.1;Parent=gene-VA249_RS18205;Dbxref=Genbank:WP_225927128.1;Name=WP_225927128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452232.1;locus_tag=VA249_RS18205;product=DUF5666 domain-containing protein;protein_id=WP_225927128.1;transl_table=11 NZ_AP024166.1 RefSeq gene 838367 839410 . - . ID=gene-VA249_RS18210;Name=VA249_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18210;old_locus_tag=VYA_34320 NZ_AP024166.1 Protein Homology CDS 838367 839410 . - 0 ID=cds-WP_128813014.1;Parent=gene-VA249_RS18210;Dbxref=Genbank:WP_128813014.1;Name=WP_128813014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452233.1;locus_tag=VA249_RS18210;product=Preprotein translocase subunit SecY;protein_id=WP_128813014.1;transl_table=11 NZ_AP024166.1 RefSeq gene 839647 840999 . - . ID=gene-VA249_RS18215;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=VA249_RS18215;old_locus_tag=VYA_34330 NZ_AP024166.1 Protein Homology CDS 839647 840999 . - 0 ID=cds-WP_221070086.1;Parent=gene-VA249_RS18215;Dbxref=Genbank:WP_221070086.1;Name=WP_221070086.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431551.1;locus_tag=VA249_RS18215;product=molecular chaperone;protein_id=WP_221070086.1;transl_table=11 NZ_AP024166.1 RefSeq gene 841174 841800 . - . ID=gene-VA249_RS18220;Name=VA249_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18220;old_locus_tag=VYA_34340 NZ_AP024166.1 Protein Homology CDS 841174 841800 . - 0 ID=cds-WP_221070089.1;Parent=gene-VA249_RS18220;Dbxref=Genbank:WP_221070089.1;Name=WP_221070089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439321.1;locus_tag=VA249_RS18220;product=hypothetical protein;protein_id=WP_221070089.1;transl_table=11 NZ_AP024166.1 RefSeq gene 842284 842604 . - . ID=gene-VA249_RS18225;Name=VA249_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18225;old_locus_tag=VYA_34350 NZ_AP024166.1 Protein Homology CDS 842284 842604 . - 0 ID=cds-WP_221070090.1;Parent=gene-VA249_RS18225;Dbxref=Genbank:WP_221070090.1;Name=WP_221070090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431478.1;locus_tag=VA249_RS18225;product=DOPA 4%2C5-dioxygenase family protein;protein_id=WP_221070090.1;transl_table=11 NZ_AP024166.1 RefSeq gene 843129 844223 . + . ID=gene-VA249_RS18230;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=VA249_RS18230;old_locus_tag=VYA_34360 NZ_AP024166.1 Protein Homology CDS 843129 844223 . + 0 ID=cds-WP_221070092.1;Parent=gene-VA249_RS18230;Dbxref=Genbank:WP_221070092.1;Name=WP_221070092.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431459.1;locus_tag=VA249_RS18230;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_221070092.1;transl_table=11 NZ_AP024166.1 RefSeq gene 844216 845199 . + . ID=gene-VA249_RS18235;Name=VA249_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18235;old_locus_tag=VYA_34370 NZ_AP024166.1 Protein Homology CDS 844216 845199 . + 0 ID=cds-WP_221070094.1;Parent=gene-VA249_RS18235;Dbxref=Genbank:WP_221070094.1;Name=WP_221070094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531531.1;locus_tag=VA249_RS18235;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_221070094.1;transl_table=11 NZ_AP024166.1 RefSeq gene 845196 846338 . + . ID=gene-VA249_RS18240;Name=VA249_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18240;old_locus_tag=VYA_34380 NZ_AP024166.1 Protein Homology CDS 845196 846338 . + 0 ID=cds-WP_221070096.1;Parent=gene-VA249_RS18240;Dbxref=Genbank:WP_221070096.1;Name=WP_221070096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452241.1;locus_tag=VA249_RS18240;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_221070096.1;transl_table=11 NZ_AP024166.1 RefSeq gene 846418 847383 . - . ID=gene-VA249_RS18245;Name=VA249_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18245;old_locus_tag=VYA_34390 NZ_AP024166.1 Protein Homology CDS 846418 847383 . - 0 ID=cds-WP_221070098.1;Parent=gene-VA249_RS18245;Dbxref=Genbank:WP_221070098.1;Name=WP_221070098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129188.1;locus_tag=VA249_RS18245;product=FAD-binding protein;protein_id=WP_221070098.1;transl_table=11 NZ_AP024166.1 RefSeq gene 847394 848143 . - . ID=gene-VA249_RS18250;Name=VA249_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18250;old_locus_tag=VYA_34400 NZ_AP024166.1 Protein Homology CDS 847394 848143 . - 0 ID=cds-WP_221070100.1;Parent=gene-VA249_RS18250;Dbxref=Genbank:WP_221070100.1;Name=WP_221070100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450138.1;locus_tag=VA249_RS18250;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_221070100.1;transl_table=11 NZ_AP024166.1 RefSeq gene 848477 850138 . + . ID=gene-VA249_RS18255;Name=VA249_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18255;old_locus_tag=VYA_34410 NZ_AP024166.1 Protein Homology CDS 848477 850138 . + 0 ID=cds-WP_221070101.1;Parent=gene-VA249_RS18255;Dbxref=Genbank:WP_221070101.1;Name=WP_221070101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451612.1;locus_tag=VA249_RS18255;product=electron-transfer flavoprotein:ubiquinone oxidoreductase;protein_id=WP_221070101.1;transl_table=11 NZ_AP024166.1 RefSeq gene 850166 851125 . - . ID=gene-VA249_RS18260;Name=VA249_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18260;old_locus_tag=VYA_34420 NZ_AP024166.1 Protein Homology CDS 850166 851125 . - 0 ID=cds-WP_221070103.1;Parent=gene-VA249_RS18260;Dbxref=Genbank:WP_221070103.1;Name=WP_221070103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704627.1;locus_tag=VA249_RS18260;product=FAD:protein FMN transferase;protein_id=WP_221070103.1;transl_table=11 NZ_AP024166.1 RefSeq gene 851221 854235 . - . ID=gene-VA249_RS18265;Name=VA249_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18265;old_locus_tag=VYA_34430 NZ_AP024166.1 Protein Homology CDS 851221 854235 . - 0 ID=cds-WP_221070105.1;Parent=gene-VA249_RS18265;Dbxref=Genbank:WP_221070105.1;Name=WP_221070105.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197276.1;locus_tag=VA249_RS18265;product=flavocytochrome c;protein_id=WP_221070105.1;transl_table=11 NZ_AP024166.1 RefSeq gene 854563 855213 . - . ID=gene-VA249_RS18270;Name=VA249_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18270;old_locus_tag=VYA_34440 NZ_AP024166.1 Protein Homology CDS 854563 855213 . - 0 ID=cds-WP_221070107.1;Parent=gene-VA249_RS18270;Dbxref=Genbank:WP_221070107.1;Name=WP_221070107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005431530.1;locus_tag=VA249_RS18270;product=glutathione S-transferase family protein;protein_id=WP_221070107.1;transl_table=11 NZ_AP024166.1 RefSeq gene 855332 856183 . + . ID=gene-VA249_RS18275;Name=VA249_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18275;old_locus_tag=VYA_34450 NZ_AP024166.1 Protein Homology CDS 855332 856183 . + 0 ID=cds-WP_221070109.1;Parent=gene-VA249_RS18275;Dbxref=Genbank:WP_221070109.1;Name=WP_221070109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017448110.1;locus_tag=VA249_RS18275;product=LysR family transcriptional regulator;protein_id=WP_221070109.1;transl_table=11 NZ_AP024166.1 RefSeq gene 856318 857652 . - . ID=gene-VA249_RS18280;Name=VA249_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18280;old_locus_tag=VYA_34460 NZ_AP024166.1 Protein Homology CDS 856318 857652 . - 0 ID=cds-WP_221072231.1;Parent=gene-VA249_RS18280;Dbxref=Genbank:WP_221072231.1;Name=WP_221072231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019040.2;locus_tag=VA249_RS18280;product=DUF1501 domain-containing protein;protein_id=WP_221072231.1;transl_table=11 NZ_AP024166.1 RefSeq gene 857657 859381 . - . ID=gene-VA249_RS18285;Name=VA249_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18285;old_locus_tag=VYA_34470 NZ_AP024166.1 Protein Homology CDS 857657 859381 . - 0 ID=cds-WP_221070112.1;Parent=gene-VA249_RS18285;Dbxref=Genbank:WP_221070112.1;Name=WP_221070112.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020390.2;locus_tag=VA249_RS18285;product=DUF1800 family protein;protein_id=WP_221070112.1;transl_table=11 NZ_AP024166.1 RefSeq gene 859574 860242 . - . ID=gene-VA249_RS18290;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=VA249_RS18290;old_locus_tag=VYA_34480 NZ_AP024166.1 Protein Homology CDS 859574 860242 . - 0 ID=cds-WP_221070114.1;Parent=gene-VA249_RS18290;Dbxref=Genbank:WP_221070114.1;Name=WP_221070114.1;Ontology_term=GO:0071705,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=artM;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455704.1;locus_tag=VA249_RS18290;product=arginine ABC transporter permease ArtM;protein_id=WP_221070114.1;transl_table=11 NZ_AP024166.1 RefSeq gene 860239 860928 . - . ID=gene-VA249_RS18295;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=VA249_RS18295;old_locus_tag=VYA_34490 NZ_AP024166.1 Protein Homology CDS 860239 860928 . - 0 ID=cds-WP_221070116.1;Parent=gene-VA249_RS18295;Dbxref=Genbank:WP_221070116.1;Name=WP_221070116.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=artQ;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001964442.1;locus_tag=VA249_RS18295;product=arginine ABC transporter permease ArtQ;protein_id=WP_221070116.1;transl_table=11 NZ_AP024166.1 RefSeq gene 860930 861673 . - . ID=gene-VA249_RS18300;Name=VA249_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18300;old_locus_tag=VYA_34500 NZ_AP024166.1 Protein Homology CDS 860930 861673 . - 0 ID=cds-WP_128813031.1;Parent=gene-VA249_RS18300;Dbxref=Genbank:WP_128813031.1;Name=WP_128813031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197270.1;locus_tag=VA249_RS18300;product=arginine ABC transporter substrate-binding protein;protein_id=WP_128813031.1;transl_table=11 NZ_AP024166.1 RefSeq gene 861765 862508 . - . ID=gene-VA249_RS18305;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=VA249_RS18305;old_locus_tag=VYA_34510 NZ_AP024166.1 Protein Homology CDS 861765 862508 . - 0 ID=cds-WP_211917022.1;Parent=gene-VA249_RS18305;Dbxref=Genbank:WP_211917022.1;Name=WP_211917022.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017091671.1;locus_tag=VA249_RS18305;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_211917022.1;transl_table=11 NZ_AP024166.1 RefSeq gene 862935 863741 . + . ID=gene-VA249_RS18310;Name=VA249_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18310;old_locus_tag=VYA_34520 NZ_AP024166.1 Protein Homology CDS 862935 863741 . + 0 ID=cds-WP_221072232.1;Parent=gene-VA249_RS18310;Dbxref=Genbank:WP_221072232.1;Name=WP_221072232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018420.2;locus_tag=VA249_RS18310;product=DUF1194 domain-containing protein;protein_id=WP_221072232.1;transl_table=11 NZ_AP024166.1 RefSeq gene 863856 864248 . - . ID=gene-VA249_RS18315;Name=VA249_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18315;old_locus_tag=VYA_34530 NZ_AP024166.1 Protein Homology CDS 863856 864248 . - 0 ID=cds-WP_221070118.1;Parent=gene-VA249_RS18315;Dbxref=Genbank:WP_221070118.1;Name=WP_221070118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005450164.1;locus_tag=VA249_RS18315;product=nuclear transport factor 2 family protein;protein_id=WP_221070118.1;transl_table=11 NZ_AP024166.1 RefSeq gene 864324 865286 . - . ID=gene-VA249_RS18320;Name=VA249_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18320;old_locus_tag=VYA_34540 NZ_AP024166.1 Protein Homology CDS 864324 865286 . - 0 ID=cds-WP_221070120.1;Parent=gene-VA249_RS18320;Dbxref=Genbank:WP_221070120.1;Name=WP_221070120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017052615.1;locus_tag=VA249_RS18320;product=alpha/beta hydrolase;protein_id=WP_221070120.1;transl_table=11 NZ_AP024166.1 RefSeq gene 865531 866625 . - . ID=gene-VA249_RS18325;Name=VA249_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18325;old_locus_tag=VYA_34550 NZ_AP024166.1 Protein Homology CDS 865531 866625 . - 0 ID=cds-WP_221070122.1;Parent=gene-VA249_RS18325;Dbxref=Genbank:WP_221070122.1;Name=WP_221070122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696183.1;locus_tag=VA249_RS18325;product=NADH:flavin oxidoreductase;protein_id=WP_221070122.1;transl_table=11 NZ_AP024166.1 RefSeq gene 866821 867579 . - . ID=gene-VA249_RS18330;Name=VA249_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18330;old_locus_tag=VYA_34560 NZ_AP024166.1 Protein Homology CDS 866821 867579 . - 0 ID=cds-WP_221070125.1;Parent=gene-VA249_RS18330;Dbxref=Genbank:WP_221070125.1;Name=WP_221070125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005443821.1;locus_tag=VA249_RS18330;product=SDR family oxidoreductase;protein_id=WP_221070125.1;transl_table=11 NZ_AP024166.1 RefSeq gene 867588 868490 . - . ID=gene-VA249_RS18335;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=VA249_RS18335;old_locus_tag=VYA_34570 NZ_AP024166.1 Protein Homology CDS 867588 868490 . - 0 ID=cds-WP_221070127.1;Parent=gene-VA249_RS18335;Dbxref=Genbank:WP_221070127.1;Name=WP_221070127.1;Ontology_term=GO:0006574,GO:0008442;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005498503.1;locus_tag=VA249_RS18335;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_221070127.1;transl_table=11 NZ_AP024166.1 RefSeq gene 868501 869625 . - . ID=gene-VA249_RS18340;Name=VA249_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18340;old_locus_tag=VYA_34580 NZ_AP024166.1 Protein Homology CDS 868501 869625 . - 0 ID=cds-WP_221070129.1;Parent=gene-VA249_RS18340;Dbxref=Genbank:WP_221070129.1;Name=WP_221070129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451600.1;locus_tag=VA249_RS18340;product=3-hydroxyisobutyryl-CoA hydrolase;protein_id=WP_221070129.1;transl_table=11 NZ_AP024166.1 RefSeq gene 869634 870422 . - . ID=gene-VA249_RS18345;Name=VA249_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18345;old_locus_tag=VYA_34590 NZ_AP024166.1 Protein Homology CDS 869634 870422 . - 0 ID=cds-WP_221070131.1;Parent=gene-VA249_RS18345;Dbxref=Genbank:WP_221070131.1;Name=WP_221070131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451598.1;locus_tag=VA249_RS18345;product=enoyl-CoA hydratase;protein_id=WP_221070131.1;transl_table=11 NZ_AP024166.1 RefSeq gene 870453 871607 . - . ID=gene-VA249_RS18350;Name=VA249_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18350;old_locus_tag=VYA_34600 NZ_AP024166.1 Protein Homology CDS 870453 871607 . - 0 ID=cds-WP_221070133.1;Parent=gene-VA249_RS18350;Dbxref=Genbank:WP_221070133.1;Name=WP_221070133.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634262.1;locus_tag=VA249_RS18350;product=acyl-CoA dehydrogenase family protein;protein_id=WP_221070133.1;transl_table=11 NZ_AP024166.1 RefSeq gene 871648 873141 . - . ID=gene-VA249_RS18355;Name=VA249_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18355;old_locus_tag=VYA_34610 NZ_AP024166.1 Protein Homology CDS 871648 873141 . - 0 ID=cds-WP_221070135.1;Parent=gene-VA249_RS18355;Dbxref=Genbank:WP_221070135.1;Name=WP_221070135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451594.1;locus_tag=VA249_RS18355;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_221070135.1;transl_table=11 NZ_AP024166.1 RefSeq gene 873154 874368 . - . ID=gene-VA249_RS18360;Name=VA249_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18360;old_locus_tag=VYA_34620 NZ_AP024166.1 Protein Homology CDS 873154 874368 . - 0 ID=cds-WP_221070137.1;Parent=gene-VA249_RS18360;Dbxref=Genbank:WP_221070137.1;Name=WP_221070137.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020328237.1;locus_tag=VA249_RS18360;product=acetyl-CoA C-acyltransferase;protein_id=WP_221070137.1;transl_table=11 NZ_AP024166.1 RefSeq gene 874667 875038 . + . ID=gene-VA249_RS18365;Name=VA249_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18365;old_locus_tag=VYA_34630 NZ_AP024166.1 Protein Homology CDS 874667 875038 . + 0 ID=cds-WP_211916999.1;Parent=gene-VA249_RS18365;Dbxref=Genbank:WP_211916999.1;Name=WP_211916999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313068.1;locus_tag=VA249_RS18365;product=MerR family DNA-binding transcriptional regulator;protein_id=WP_211916999.1;transl_table=11 NZ_AP024166.1 RefSeq gene 875162 876331 . + . ID=gene-VA249_RS18370;Name=VA249_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18370;old_locus_tag=VYA_34640 NZ_AP024166.1 Protein Homology CDS 875162 876331 . + 0 ID=cds-WP_221070139.1;Parent=gene-VA249_RS18370;Dbxref=Genbank:WP_221070139.1;Name=WP_221070139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704659.1;locus_tag=VA249_RS18370;product=isovaleryl-CoA dehydrogenase;protein_id=WP_221070139.1;transl_table=11 NZ_AP024166.1 RefSeq gene 876353 877957 . + . ID=gene-VA249_RS18375;Name=VA249_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18375;old_locus_tag=VYA_34650 NZ_AP024166.1 Protein Homology CDS 876353 877957 . + 0 ID=cds-WP_221070141.1;Parent=gene-VA249_RS18375;Dbxref=Genbank:WP_221070141.1;Name=WP_221070141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003100387.1;locus_tag=VA249_RS18375;product=methylcrotonoyl-CoA carboxylase;protein_id=WP_221070141.1;transl_table=11 NZ_AP024166.1 RefSeq gene 877983 878828 . + . ID=gene-VA249_RS18380;Name=VA249_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18380;old_locus_tag=VYA_34660 NZ_AP024166.1 Protein Homology CDS 877983 878828 . + 0 ID=cds-WP_221070143.1;Parent=gene-VA249_RS18380;Dbxref=Genbank:WP_221070143.1;Name=WP_221070143.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704661.1;locus_tag=VA249_RS18380;product=enoyl-CoA hydratase-related protein;protein_id=WP_221070143.1;transl_table=11 NZ_AP024166.1 RefSeq gene 878825 879730 . + . ID=gene-VA249_RS18385;Name=VA249_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18385;old_locus_tag=VYA_34670 NZ_AP024166.1 Protein Homology CDS 878825 879730 . + 0 ID=cds-WP_221070145.1;Parent=gene-VA249_RS18385;Dbxref=Genbank:WP_221070145.1;Name=WP_221070145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005455732.1;locus_tag=VA249_RS18385;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_221070145.1;transl_table=11 NZ_AP024166.1 RefSeq gene 879766 880644 . - . ID=gene-VA249_RS18390;Name=VA249_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18390;old_locus_tag=VYA_34680 NZ_AP024166.1 Protein Homology CDS 879766 880644 . - 0 ID=cds-WP_221070147.1;Parent=gene-VA249_RS18390;Dbxref=Genbank:WP_221070147.1;Name=WP_221070147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005483368.1;locus_tag=VA249_RS18390;product=DMT family transporter;protein_id=WP_221070147.1;transl_table=11 NZ_AP024166.1 RefSeq gene 881213 881611 . + . ID=gene-VA249_RS18395;Name=VA249_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18395;old_locus_tag=VYA_34690 NZ_AP024166.1 Protein Homology CDS 881213 881611 . + 0 ID=cds-WP_211916988.1;Parent=gene-VA249_RS18395;Dbxref=Genbank:WP_211916988.1;Name=WP_211916988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819538.1;locus_tag=VA249_RS18395;product=cytochrome c;protein_id=WP_211916988.1;transl_table=11 NZ_AP024166.1 RefSeq gene 881627 883042 . + . ID=gene-VA249_RS18400;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=VA249_RS18400;old_locus_tag=VYA_34700 NZ_AP024166.1 Protein Homology CDS 881627 883042 . + 0 ID=cds-WP_221070149.1;Parent=gene-VA249_RS18400;Dbxref=Genbank:WP_221070149.1;Name=WP_221070149.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoN;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428706.1;locus_tag=VA249_RS18400;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=WP_221070149.1;transl_table=11 NZ_AP024166.1 RefSeq gene 883036 883650 . + . ID=gene-VA249_RS18405;Name=VA249_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18405;old_locus_tag=VYA_34710 NZ_AP024166.1 Protein Homology CDS 883036 883650 . + 0 ID=cds-WP_221072233.1;Parent=gene-VA249_RS18405;Dbxref=Genbank:WP_221072233.1;Name=WP_221072233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017094568.1;locus_tag=VA249_RS18405;product=cbb3-type cytochrome c oxidase subunit II;protein_id=WP_221072233.1;transl_table=11 NZ_AP024166.1 RefSeq gene 883647 885803 . + . ID=gene-VA249_RS18410;Name=VA249_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18410;old_locus_tag=VYA_34720 NZ_AP024166.1 Protein Homology CDS 883647 885803 . + 0 ID=cds-WP_221070150.1;Parent=gene-VA249_RS18410;Dbxref=Genbank:WP_221070150.1;Name=WP_221070150.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016766783.1;locus_tag=VA249_RS18410;product=c-type cytochrome;protein_id=WP_221070150.1;transl_table=11 NZ_AP024166.1 RefSeq gene 885921 887114 . - . ID=gene-VA249_RS18415;Name=VA249_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18415;old_locus_tag=VYA_34730 NZ_AP024166.1 Protein Homology CDS 885921 887114 . - 0 ID=cds-WP_211916982.1;Parent=gene-VA249_RS18415;Dbxref=Genbank:WP_211916982.1;Name=WP_211916982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440661.1;locus_tag=VA249_RS18415;product=acetate/propionate family kinase;protein_id=WP_211916982.1;transl_table=11 NZ_AP024166.1 RefSeq gene 887470 889455 . - . ID=gene-VA249_RS18420;Name=VA249_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18420;old_locus_tag=VYA_34740 NZ_AP024166.1 Protein Homology CDS 887470 889455 . - 0 ID=cds-WP_221070153.1;Parent=gene-VA249_RS18420;Dbxref=Genbank:WP_221070153.1;Name=WP_221070153.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818708.1;locus_tag=VA249_RS18420;product=DEAD/DEAH box helicase;protein_id=WP_221070153.1;transl_table=11 NZ_AP024166.1 RefSeq gene 889832 891835 . + . ID=gene-VA249_RS18425;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=VA249_RS18425;old_locus_tag=VYA_34750 NZ_AP024166.1 Protein Homology CDS 889832 891835 . + 0 ID=cds-WP_221070155.1;Parent=gene-VA249_RS18425;Dbxref=Genbank:WP_221070155.1;Name=WP_221070155.1;Ontology_term=GO:0006401,GO:0008859;gbkey=CDS;gene=rnb;go_function=exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821083.1;locus_tag=VA249_RS18425;product=exoribonuclease II;protein_id=WP_221070155.1;transl_table=11 NZ_AP024166.1 RefSeq gene 891904 892701 . + . ID=gene-VA249_RS18430;Name=VA249_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18430;old_locus_tag=VYA_34760 NZ_AP024166.1 Protein Homology CDS 891904 892701 . + 0 ID=cds-WP_211916950.1;Parent=gene-VA249_RS18430;Dbxref=Genbank:WP_211916950.1;Name=WP_211916950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704671.1;locus_tag=VA249_RS18430;product=AraC family transcriptional regulator;protein_id=WP_211916950.1;transl_table=11 NZ_AP024166.1 RefSeq gene 892708 893061 . - . ID=gene-VA249_RS18435;Name=VA249_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18435;old_locus_tag=VYA_34770 NZ_AP024166.1 Protein Homology CDS 892708 893061 . - 0 ID=cds-WP_211916948.1;Parent=gene-VA249_RS18435;Dbxref=Genbank:WP_211916948.1;Name=WP_211916948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821084.1;locus_tag=VA249_RS18435;product=DUF3024 domain-containing protein;protein_id=WP_211916948.1;transl_table=11 NZ_AP024166.1 RefSeq gene 893421 894248 . + . ID=gene-VA249_RS18440;Name=VA249_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18440;old_locus_tag=VYA_34780 NZ_AP024166.1 Protein Homology CDS 893421 894248 . + 0 ID=cds-WP_221070157.1;Parent=gene-VA249_RS18440;Dbxref=Genbank:WP_221070157.1;Name=WP_221070157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452181.1;locus_tag=VA249_RS18440;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_221070157.1;transl_table=11 NZ_AP024166.1 RefSeq gene 894306 894986 . - . ID=gene-VA249_RS18445;Name=VA249_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18445;old_locus_tag=VYA_34790 NZ_AP024166.1 Protein Homology CDS 894306 894986 . - 0 ID=cds-WP_221070159.1;Parent=gene-VA249_RS18445;Dbxref=Genbank:WP_221070159.1;Name=WP_221070159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452183.1;locus_tag=VA249_RS18445;product=MaoC family dehydratase;protein_id=WP_221070159.1;transl_table=11 NZ_AP024166.1 RefSeq gene 895317 895407 . + . ID=gene-VA249_RS18450;Name=VA249_RS18450;gbkey=Gene;gene_biotype=tRNA;locus_tag=VA249_RS18450;old_locus_tag=VYA_t01340 NZ_AP024166.1 tRNAscan-SE tRNA 895317 895407 . + . ID=rna-VA249_RS18450;Parent=gene-VA249_RS18450;anticodon=(pos:895351..895353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS18450;product=tRNA-Ser NZ_AP024166.1 tRNAscan-SE exon 895317 895407 . + . ID=exon-VA249_RS18450-1;Parent=rna-VA249_RS18450;anticodon=(pos:895351..895353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=VA249_RS18450;product=tRNA-Ser NZ_AP024166.1 RefSeq gene 895487 896785 . + . ID=gene-VA249_RS18455;Name=VA249_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18455;old_locus_tag=VYA_34800 NZ_AP024166.1 Protein Homology CDS 895487 896785 . + 0 ID=cds-WP_221070161.1;Parent=gene-VA249_RS18455;Dbxref=Genbank:WP_221070161.1;Name=WP_221070161.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050055.1;locus_tag=VA249_RS18455;product=tyrosine-type recombinase/integrase;protein_id=WP_221070161.1;transl_table=11 NZ_AP024166.1 RefSeq gene 896887 897048 . + . ID=gene-VA249_RS18460;Name=VA249_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18460;old_locus_tag=VYA_34810 NZ_AP024166.1 Protein Homology CDS 896887 897048 . + 0 ID=cds-WP_221070163.1;Parent=gene-VA249_RS18460;Dbxref=Genbank:WP_221070163.1;Name=WP_221070163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451459.1;locus_tag=VA249_RS18460;product=hypothetical protein;protein_id=WP_221070163.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 897235 897507 . + . ID=gene-VA249_RS18465;Name=VA249_RS18465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS18465;old_locus_tag=VYA_34820;partial=true;pseudo=true;start_range=.,897235 NZ_AP024166.1 Protein Homology CDS 897235 897507 . + 0 ID=cds-VA249_RS18465;Parent=gene-VA249_RS18465;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050055.1;locus_tag=VA249_RS18465;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,897235;transl_table=11 NZ_AP024166.1 RefSeq gene 897637 898467 . - . ID=gene-VA249_RS18470;Name=VA249_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18470;old_locus_tag=VYA_34830 NZ_AP024166.1 Protein Homology CDS 897637 898467 . - 0 ID=cds-WP_221070166.1;Parent=gene-VA249_RS18470;Dbxref=Genbank:WP_221070166.1;Name=WP_221070166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=VA249_RS18470;product=LysR family transcriptional regulator;protein_id=WP_221070166.1;transl_table=11 NZ_AP024166.1 RefSeq gene 898779 899861 . + . ID=gene-VA249_RS18475;Name=VA249_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18475;old_locus_tag=VYA_34840 NZ_AP024166.1 Protein Homology CDS 898779 899861 . + 0 ID=cds-WP_221070167.1;Parent=gene-VA249_RS18475;Dbxref=Genbank:WP_221070167.1;Name=WP_221070167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014215.2;locus_tag=VA249_RS18475;product=alpha/beta hydrolase;protein_id=WP_221070167.1;transl_table=11 NZ_AP024166.1 RefSeq gene 900551 900895 . + . ID=gene-VA249_RS24140;Name=VA249_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24140;old_locus_tag=VYA_34850 NZ_AP024166.1 Protein Homology CDS 900551 900895 . + 0 ID=cds-WP_225927129.1;Parent=gene-VA249_RS24140;Dbxref=Genbank:WP_225927129.1;Name=WP_225927129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024502.2;locus_tag=VA249_RS24140;product=phage integrase SAM-like domain-containing protein;protein_id=WP_225927129.1;transl_table=11 NZ_AP024166.1 RefSeq gene 900901 901641 . + . ID=gene-VA249_RS18480;Name=VA249_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18480;old_locus_tag=VYA_34860 NZ_AP024166.1 Protein Homology CDS 900901 901641 . + 0 ID=cds-WP_225927130.1;Parent=gene-VA249_RS18480;Dbxref=Genbank:WP_225927130.1;Name=WP_225927130.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=VA249_RS18480;product=site-specific integrase;protein_id=WP_225927130.1;transl_table=11 NZ_AP024166.1 RefSeq gene 901811 903307 . + . ID=gene-VA249_RS18485;Name=VA249_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18485;old_locus_tag=VYA_34870 NZ_AP024166.1 Protein Homology CDS 901811 903307 . + 0 ID=cds-WP_221070169.1;Parent=gene-VA249_RS18485;Dbxref=Genbank:WP_221070169.1;Name=WP_221070169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050050.1;locus_tag=VA249_RS18485;product=hypothetical protein;protein_id=WP_221070169.1;transl_table=11 NZ_AP024166.1 RefSeq gene 903464 904402 . + . ID=gene-VA249_RS18490;Name=VA249_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18490;old_locus_tag=VYA_34880 NZ_AP024166.1 Protein Homology CDS 903464 904402 . + 0 ID=cds-WP_221070171.1;Parent=gene-VA249_RS18490;Dbxref=Genbank:WP_221070171.1;Name=WP_221070171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050049.1;locus_tag=VA249_RS18490;product=hypothetical protein;protein_id=WP_221070171.1;transl_table=11 NZ_AP024166.1 RefSeq gene 904433 904690 . + . ID=gene-VA249_RS18495;Name=VA249_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18495;old_locus_tag=VYA_34890 NZ_AP024166.1 Protein Homology CDS 904433 904690 . + 0 ID=cds-WP_053050663.1;Parent=gene-VA249_RS18495;Dbxref=Genbank:WP_053050663.1;Name=WP_053050663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017050048.1;locus_tag=VA249_RS18495;product=helix-turn-helix transcriptional regulator;protein_id=WP_053050663.1;transl_table=11 NZ_AP024166.1 RefSeq gene 904863 905153 . - . ID=gene-VA249_RS18500;Name=VA249_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18500;old_locus_tag=VYA_34900 NZ_AP024166.1 GeneMarkS-2+ CDS 904863 905153 . - 0 ID=cds-WP_005596297.1;Parent=gene-VA249_RS18500;Dbxref=Genbank:WP_005596297.1;Name=WP_005596297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18500;product=hypothetical protein;protein_id=WP_005596297.1;transl_table=11 NZ_AP024166.1 RefSeq gene 905795 906193 . + . ID=gene-VA249_RS18505;Name=VA249_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18505;old_locus_tag=VYA_34910 NZ_AP024166.1 GeneMarkS-2+ CDS 905795 906193 . + 0 ID=cds-WP_221070173.1;Parent=gene-VA249_RS18505;Dbxref=Genbank:WP_221070173.1;Name=WP_221070173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18505;product=hypothetical protein;protein_id=WP_221070173.1;transl_table=11 NZ_AP024166.1 RefSeq gene 906278 907078 . - . ID=gene-VA249_RS18510;Name=VA249_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18510;old_locus_tag=VYA_34920 NZ_AP024166.1 GeneMarkS-2+ CDS 906278 907078 . - 0 ID=cds-WP_221070175.1;Parent=gene-VA249_RS18510;Dbxref=Genbank:WP_221070175.1;Name=WP_221070175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18510;product=hypothetical protein;protein_id=WP_221070175.1;transl_table=11 NZ_AP024166.1 RefSeq gene 907276 907566 . + . ID=gene-VA249_RS18515;Name=VA249_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18515;old_locus_tag=VYA_34930 NZ_AP024166.1 Protein Homology CDS 907276 907566 . + 0 ID=cds-WP_225927131.1;Parent=gene-VA249_RS18515;Dbxref=Genbank:WP_225927131.1;Name=WP_225927131.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: protein motif:HMM:NF013964.2;locus_tag=VA249_RS18515;product=HNH endonuclease;protein_id=WP_225927131.1;transl_table=11 NZ_AP024166.1 RefSeq gene 907585 907965 . - . ID=gene-VA249_RS18520;Name=VA249_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18520;old_locus_tag=VYA_34940 NZ_AP024166.1 GeneMarkS-2+ CDS 907585 907965 . - 0 ID=cds-WP_221070177.1;Parent=gene-VA249_RS18520;Dbxref=Genbank:WP_221070177.1;Name=WP_221070177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18520;product=hypothetical protein;protein_id=WP_221070177.1;transl_table=11 NZ_AP024166.1 RefSeq gene 908723 909190 . - . ID=gene-VA249_RS18525;Name=VA249_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18525;old_locus_tag=VYA_34950 NZ_AP024166.1 Protein Homology CDS 908723 909190 . - 0 ID=cds-WP_221072234.1;Parent=gene-VA249_RS18525;Dbxref=Genbank:WP_221072234.1;Name=WP_221072234.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599120.1;locus_tag=VA249_RS18525;product=GNAT family N-acetyltransferase;protein_id=WP_221072234.1;transl_table=11 NZ_AP024166.1 RefSeq gene 909718 911034 . + . ID=gene-VA249_RS18530;Name=VA249_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18530;old_locus_tag=VYA_34960 NZ_AP024166.1 Protein Homology CDS 909718 911034 . + 0 ID=cds-WP_221070179.1;Parent=gene-VA249_RS18530;Dbxref=Genbank:WP_221070179.1;Name=WP_221070179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385879.1;locus_tag=VA249_RS18530;product=GGDEF domain-containing protein;protein_id=WP_221070179.1;transl_table=11 NZ_AP024166.1 RefSeq gene 911127 912509 . - . ID=gene-VA249_RS18535;Name=VA249_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18535;old_locus_tag=VYA_34970 NZ_AP024166.1 Protein Homology CDS 911127 912509 . - 0 ID=cds-WP_221070181.1;Parent=gene-VA249_RS18535;Dbxref=Genbank:WP_221070181.1;Name=WP_221070181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017029827.1;locus_tag=VA249_RS18535;product=NCS2 family permease;protein_id=WP_221070181.1;transl_table=11 NZ_AP024166.1 RefSeq gene 912896 914353 . + . ID=gene-VA249_RS18540;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=VA249_RS18540;old_locus_tag=VYA_34980 NZ_AP024166.1 Protein Homology CDS 912896 914353 . + 0 ID=cds-WP_221070183.1;Parent=gene-VA249_RS18540;Dbxref=Genbank:WP_221070183.1;Name=WP_221070183.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635754.1;locus_tag=VA249_RS18540;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_221070183.1;transl_table=11 NZ_AP024166.1 RefSeq gene 914514 915248 . + . ID=gene-VA249_RS18545;Name=VA249_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18545;old_locus_tag=VYA_34990 NZ_AP024166.1 Protein Homology CDS 914514 915248 . + 0 ID=cds-WP_128813065.1;Parent=gene-VA249_RS18545;Dbxref=Genbank:WP_128813065.1;Name=WP_128813065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391048.1;locus_tag=VA249_RS18545;product=IclR family transcriptional regulator;protein_id=WP_128813065.1;transl_table=11 NZ_AP024166.1 RefSeq gene 915255 916094 . + . ID=gene-VA249_RS18550;Name=VA249_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18550;old_locus_tag=VYA_35000 NZ_AP024166.1 Protein Homology CDS 915255 916094 . + 0 ID=cds-WP_221070186.1;Parent=gene-VA249_RS18550;Dbxref=Genbank:WP_221070186.1;Name=WP_221070186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452218.1;locus_tag=VA249_RS18550;product=arginase;protein_id=WP_221070186.1;transl_table=11 NZ_AP024166.1 RefSeq gene 916414 919518 . + . ID=gene-VA249_RS18555;Name=VA249_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18555;old_locus_tag=VYA_35010 NZ_AP024166.1 Protein Homology CDS 916414 919518 . + 0 ID=cds-WP_221070188.1;Parent=gene-VA249_RS18555;Dbxref=Genbank:WP_221070188.1;Name=WP_221070188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190697.1;locus_tag=VA249_RS18555;product=polymer-forming cytoskeletal protein;protein_id=WP_221070188.1;transl_table=11 NZ_AP024166.1 RefSeq gene 919625 920917 . - . ID=gene-VA249_RS18560;Name=VA249_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18560;old_locus_tag=VYA_35020 NZ_AP024166.1 Protein Homology CDS 919625 920917 . - 0 ID=cds-WP_128813068.1;Parent=gene-VA249_RS18560;Dbxref=Genbank:WP_128813068.1;Name=WP_128813068.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532440.1;locus_tag=VA249_RS18560;product=DEAD/DEAH box helicase;protein_id=WP_128813068.1;transl_table=11 NZ_AP024166.1 RefSeq gene 921028 922014 . - . ID=gene-VA249_RS18565;Name=VA249_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18565;old_locus_tag=VYA_35030 NZ_AP024166.1 Protein Homology CDS 921028 922014 . - 0 ID=cds-WP_221070190.1;Parent=gene-VA249_RS18565;Dbxref=Genbank:WP_221070190.1;Name=WP_221070190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451411.1;locus_tag=VA249_RS18565;product=GTP-binding protein;protein_id=WP_221070190.1;transl_table=11 NZ_AP024166.1 RefSeq gene 922144 922329 . - . ID=gene-VA249_RS18570;Name=VA249_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18570;old_locus_tag=VYA_35040 NZ_AP024166.1 GeneMarkS-2+ CDS 922144 922329 . - 0 ID=cds-WP_128813069.1;Parent=gene-VA249_RS18570;Dbxref=Genbank:WP_128813069.1;Name=WP_128813069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18570;product=hypothetical protein;protein_id=WP_128813069.1;transl_table=11 NZ_AP024166.1 RefSeq gene 922470 923108 . - . ID=gene-VA249_RS18575;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=VA249_RS18575;old_locus_tag=VYA_35050 NZ_AP024166.1 Protein Homology CDS 922470 923108 . - 0 ID=cds-WP_221070192.1;Parent=gene-VA249_RS18575;Dbxref=Genbank:WP_221070192.1;Name=WP_221070192.1;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190700.1;locus_tag=VA249_RS18575;product=pyroglutamyl-peptidase I;protein_id=WP_221070192.1;transl_table=11 NZ_AP024166.1 RefSeq gene 923117 924022 . - . ID=gene-VA249_RS18580;Name=VA249_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18580;old_locus_tag=VYA_35060 NZ_AP024166.1 Protein Homology CDS 923117 924022 . - 0 ID=cds-WP_221070193.1;Parent=gene-VA249_RS18580;Dbxref=Genbank:WP_221070193.1;Name=WP_221070193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002538579.1;locus_tag=VA249_RS18580;product=DUF979 family protein;protein_id=WP_221070193.1;transl_table=11 NZ_AP024166.1 RefSeq gene 924026 924730 . - . ID=gene-VA249_RS18585;Name=VA249_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18585;old_locus_tag=VYA_35070 NZ_AP024166.1 Protein Homology CDS 924026 924730 . - 0 ID=cds-WP_221070195.1;Parent=gene-VA249_RS18585;Dbxref=Genbank:WP_221070195.1;Name=WP_221070195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386652.1;locus_tag=VA249_RS18585;product=DUF969 family protein;protein_id=WP_221070195.1;transl_table=11 NZ_AP024166.1 RefSeq gene 925196 925444 . + . ID=gene-VA249_RS18590;Name=VA249_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18590;old_locus_tag=VYA_35080 NZ_AP024166.1 Protein Homology CDS 925196 925444 . + 0 ID=cds-WP_221070197.1;Parent=gene-VA249_RS18590;Dbxref=Genbank:WP_221070197.1;Name=WP_221070197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433595.1;locus_tag=VA249_RS18590;product=hypothetical protein;protein_id=WP_221070197.1;transl_table=11 NZ_AP024166.1 RefSeq gene 925531 926301 . - . ID=gene-VA249_RS18595;Name=VA249_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18595;old_locus_tag=VYA_35090 NZ_AP024166.1 Protein Homology CDS 925531 926301 . - 0 ID=cds-WP_221070199.1;Parent=gene-VA249_RS18595;Dbxref=Genbank:WP_221070199.1;Name=WP_221070199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451401.1;locus_tag=VA249_RS18595;product=DUF2076 family protein;protein_id=WP_221070199.1;transl_table=11 NZ_AP024166.1 RefSeq gene 926931 927410 . - . ID=gene-VA249_RS18600;Name=VA249_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18600;old_locus_tag=VYA_35100 NZ_AP024166.1 Protein Homology CDS 926931 927410 . - 0 ID=cds-WP_221070201.1;Parent=gene-VA249_RS18600;Dbxref=Genbank:WP_221070201.1;Name=WP_221070201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009848621.1;locus_tag=VA249_RS18600;product=DUF1456 family protein;protein_id=WP_221070201.1;transl_table=11 NZ_AP024166.1 RefSeq gene 927714 927959 . - . ID=gene-VA249_RS18605;Name=VA249_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18605;old_locus_tag=VYA_35110 NZ_AP024166.1 Protein Homology CDS 927714 927959 . - 0 ID=cds-WP_221070202.1;Parent=gene-VA249_RS18605;Dbxref=Genbank:WP_221070202.1;Name=WP_221070202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009845860.1;locus_tag=VA249_RS18605;product=hypothetical protein;protein_id=WP_221070202.1;transl_table=11 NZ_AP024166.1 RefSeq gene 927999 928214 . - . ID=gene-VA249_RS18610;Name=VA249_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18610;old_locus_tag=VYA_35120 NZ_AP024166.1 Protein Homology CDS 927999 928214 . - 0 ID=cds-WP_128813076.1;Parent=gene-VA249_RS18610;Dbxref=Genbank:WP_128813076.1;Name=WP_128813076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017034733.1;locus_tag=VA249_RS18610;product=DUF3820 family protein;protein_id=WP_128813076.1;transl_table=11 NZ_AP024166.1 RefSeq gene 928218 928904 . - . ID=gene-VA249_RS18615;Name=VA249_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18615;old_locus_tag=VYA_35130 NZ_AP024166.1 Protein Homology CDS 928218 928904 . - 0 ID=cds-WP_221070205.1;Parent=gene-VA249_RS18615;Dbxref=Genbank:WP_221070205.1;Name=WP_221070205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002536484.1;locus_tag=VA249_RS18615;product=DUF3313 family protein;protein_id=WP_221070205.1;transl_table=11 NZ_AP024166.1 RefSeq gene 929064 929372 . + . ID=gene-VA249_RS18620;Name=VA249_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18620 NZ_AP024166.1 Protein Homology CDS 929064 929372 . + 0 ID=cds-WP_221070206.1;Parent=gene-VA249_RS18620;Dbxref=Genbank:WP_221070206.1;Name=WP_221070206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841056.1;locus_tag=VA249_RS18620;product=cysteine-rich CWC family protein;protein_id=WP_221070206.1;transl_table=11 NZ_AP024166.1 RefSeq gene 929464 929808 . - . ID=gene-VA249_RS18625;Name=VA249_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18625;old_locus_tag=VYA_35140 NZ_AP024166.1 Protein Homology CDS 929464 929808 . - 0 ID=cds-WP_221070208.1;Parent=gene-VA249_RS18625;Dbxref=Genbank:WP_221070208.1;Name=WP_221070208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696084.1;locus_tag=VA249_RS18625;product=HopJ type III effector protein;protein_id=WP_221070208.1;transl_table=11 NZ_AP024166.1 RefSeq gene 930010 931779 . + . ID=gene-VA249_RS18630;Name=VA249_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18630;old_locus_tag=VYA_35150 NZ_AP024166.1 Protein Homology CDS 930010 931779 . + 0 ID=cds-WP_221070210.1;Parent=gene-VA249_RS18630;Dbxref=Genbank:WP_221070210.1;Name=WP_221070210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453740.1;locus_tag=VA249_RS18630;product=choice-of-anchor I family protein;protein_id=WP_221070210.1;transl_table=11 NZ_AP024166.1 RefSeq gene 931893 932234 . - . ID=gene-VA249_RS18635;Name=VA249_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18635;old_locus_tag=VYA_35160 NZ_AP024166.1 Protein Homology CDS 931893 932234 . - 0 ID=cds-WP_221070212.1;Parent=gene-VA249_RS18635;Dbxref=Genbank:WP_221070212.1;Name=WP_221070212.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841055.1;locus_tag=VA249_RS18635;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_221070212.1;transl_table=11 NZ_AP024166.1 RefSeq gene 932224 933018 . - . ID=gene-VA249_RS18640;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=VA249_RS18640;old_locus_tag=VYA_35170 NZ_AP024166.1 Protein Homology CDS 932224 933018 . - 0 ID=cds-WP_221070214.1;Parent=gene-VA249_RS18640;Dbxref=Genbank:WP_221070214.1;Name=WP_221070214.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017070189.1;locus_tag=VA249_RS18640;product=phenylalanine 4-monooxygenase;protein_id=WP_221070214.1;transl_table=11 NZ_AP024166.1 RefSeq gene 933241 935217 . + . ID=gene-VA249_RS18645;Name=VA249_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18645;old_locus_tag=VYA_35180 NZ_AP024166.1 Protein Homology CDS 933241 935217 . + 0 ID=cds-WP_221070216.1;Parent=gene-VA249_RS18645;Dbxref=Genbank:WP_221070216.1;Name=WP_221070216.1;Ontology_term=GO:0019287,GO:0030729;gbkey=CDS;go_function=acetoacetate-CoA ligase activity|0030729||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005375565.1;locus_tag=VA249_RS18645;product=acetoacetate--CoA ligase;protein_id=WP_221070216.1;transl_table=11 NZ_AP024166.1 RefSeq gene 935336 935911 . - . ID=gene-VA249_RS18650;Name=VA249_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18650;old_locus_tag=VYA_35190 NZ_AP024166.1 Protein Homology CDS 935336 935911 . - 0 ID=cds-WP_164837306.1;Parent=gene-VA249_RS18650;Dbxref=Genbank:WP_164837306.1;Name=WP_164837306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696080.1;locus_tag=VA249_RS18650;product=class I SAM-dependent methyltransferase;protein_id=WP_164837306.1;transl_table=11 NZ_AP024166.1 RefSeq gene 936097 936975 . + . ID=gene-VA249_RS18655;Name=VA249_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18655;old_locus_tag=VYA_35200 NZ_AP024166.1 Protein Homology CDS 936097 936975 . + 0 ID=cds-WP_128813084.1;Parent=gene-VA249_RS18655;Dbxref=Genbank:WP_128813084.1;Name=WP_128813084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004730238.1;locus_tag=VA249_RS18655;product=LysR family transcriptional regulator;protein_id=WP_128813084.1;transl_table=11 NZ_AP024166.1 RefSeq gene 937187 938080 . + . ID=gene-VA249_RS18660;Name=VA249_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18660;old_locus_tag=VYA_35210 NZ_AP024166.1 Protein Homology CDS 937187 938080 . + 0 ID=cds-WP_211916870.1;Parent=gene-VA249_RS18660;Dbxref=Genbank:WP_211916870.1;Name=WP_211916870.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017821101.1;locus_tag=VA249_RS18660;product=cation diffusion facilitator family transporter;protein_id=WP_211916870.1;transl_table=11 NZ_AP024166.1 RefSeq gene 938322 939224 . - . ID=gene-VA249_RS18665;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=VA249_RS18665;old_locus_tag=VYA_35220 NZ_AP024166.1 Protein Homology CDS 938322 939224 . - 0 ID=cds-WP_221070218.1;Parent=gene-VA249_RS18665;Dbxref=Genbank:WP_221070218.1;Name=WP_221070218.1;Ontology_term=GO:0016021;gbkey=CDS;gene=yddG;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129085.1;locus_tag=VA249_RS18665;product=aromatic amino acid DMT transporter YddG;protein_id=WP_221070218.1;transl_table=11 NZ_AP024166.1 RefSeq gene 939355 939501 . + . ID=gene-VA249_RS18670;Name=VA249_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18670;old_locus_tag=VYA_35230 NZ_AP024166.1 Protein Homology CDS 939355 939501 . + 0 ID=cds-WP_221070220.1;Parent=gene-VA249_RS18670;Dbxref=Genbank:WP_221070220.1;Name=WP_221070220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453721.1;locus_tag=VA249_RS18670;product=hypothetical protein;protein_id=WP_221070220.1;transl_table=11 NZ_AP024166.1 RefSeq gene 939513 940163 . + . ID=gene-VA249_RS18675;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=VA249_RS18675;old_locus_tag=VYA_35240 NZ_AP024166.1 Protein Homology CDS 939513 940163 . + 0 ID=cds-WP_221070222.1;Parent=gene-VA249_RS18675;Dbxref=Genbank:WP_221070222.1;Name=WP_221070222.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129082.1;locus_tag=VA249_RS18675;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_221070222.1;transl_table=11 NZ_AP024166.1 RefSeq gene 940498 941646 . + . ID=gene-VA249_RS18680;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=VA249_RS18680;old_locus_tag=VYA_35250 NZ_AP024166.1 Protein Homology CDS 940498 941646 . + 0 ID=cds-WP_221070224.1;Parent=gene-VA249_RS18680;Dbxref=Genbank:WP_221070224.1;Name=WP_221070224.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017071137.1;locus_tag=VA249_RS18680;product=L-threonine dehydrogenase;protein_id=WP_221070224.1;transl_table=11 NZ_AP024166.1 RefSeq gene 941798 942898 . + . ID=gene-VA249_RS18685;Name=VA249_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18685;old_locus_tag=VYA_35260 NZ_AP024166.1 Protein Homology CDS 941798 942898 . + 0 ID=cds-WP_221070225.1;Parent=gene-VA249_RS18685;Dbxref=Genbank:WP_221070225.1;Name=WP_221070225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391136.1;locus_tag=VA249_RS18685;product=sorbosone dehydrogenase family protein;protein_id=WP_221070225.1;transl_table=11 NZ_AP024166.1 RefSeq gene 943064 943678 . + . ID=gene-VA249_RS18690;Name=VA249_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18690;old_locus_tag=VYA_35270 NZ_AP024166.1 Protein Homology CDS 943064 943678 . + 0 ID=cds-WP_221070228.1;Parent=gene-VA249_RS18690;Dbxref=Genbank:WP_221070228.1;Name=WP_221070228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643614.1;locus_tag=VA249_RS18690;product=HAD family hydrolase;protein_id=WP_221070228.1;transl_table=11 NZ_AP024166.1 RefSeq gene 943766 944245 . - . ID=gene-VA249_RS18695;Name=VA249_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18695;old_locus_tag=VYA_35280 NZ_AP024166.1 Protein Homology CDS 943766 944245 . - 0 ID=cds-WP_128813090.1;Parent=gene-VA249_RS18695;Dbxref=Genbank:WP_128813090.1;Name=WP_128813090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452464.1;locus_tag=VA249_RS18695;product=DNA starvation/stationary phase protection protein;protein_id=WP_128813090.1;transl_table=11 NZ_AP024166.1 RefSeq gene 944462 946462 . - . ID=gene-VA249_RS18700;Name=VA249_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18700;old_locus_tag=VYA_35290 NZ_AP024166.1 Protein Homology CDS 944462 946462 . - 0 ID=cds-WP_221070230.1;Parent=gene-VA249_RS18700;Dbxref=Genbank:WP_221070230.1;Name=WP_221070230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452467.1;locus_tag=VA249_RS18700;product=methyl-accepting chemotaxis protein;protein_id=WP_221070230.1;transl_table=11 NZ_AP024166.1 RefSeq gene 946711 947955 . - . ID=gene-VA249_RS18705;Name=VA249_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18705;old_locus_tag=VYA_35300 NZ_AP024166.1 Protein Homology CDS 946711 947955 . - 0 ID=cds-WP_225927132.1;Parent=gene-VA249_RS18705;Dbxref=Genbank:WP_225927132.1;Name=WP_225927132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696200.1;locus_tag=VA249_RS18705;product=hypothetical protein;protein_id=WP_225927132.1;transl_table=11 NZ_AP024166.1 RefSeq gene 948011 948724 . - . ID=gene-VA249_RS18710;Name=VA249_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18710;old_locus_tag=VYA_35310 NZ_AP024166.1 Protein Homology CDS 948011 948724 . - 0 ID=cds-WP_128813093.1;Parent=gene-VA249_RS18710;Dbxref=Genbank:WP_128813093.1;Name=WP_128813093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433467.1;locus_tag=VA249_RS18710;product=ABC transporter ATP-binding protein;protein_id=WP_128813093.1;transl_table=11 NZ_AP024166.1 RefSeq gene 948724 949959 . - . ID=gene-VA249_RS18715;Name=VA249_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18715;old_locus_tag=VYA_35320 NZ_AP024166.1 Protein Homology CDS 948724 949959 . - 0 ID=cds-WP_221070231.1;Parent=gene-VA249_RS18715;Dbxref=Genbank:WP_221070231.1;Name=WP_221070231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188862.1;locus_tag=VA249_RS18715;product=ABC transporter permease;protein_id=WP_221070231.1;transl_table=11 NZ_AP024166.1 RefSeq gene 949949 951178 . - . ID=gene-VA249_RS18720;Name=VA249_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18720;old_locus_tag=VYA_35330 NZ_AP024166.1 Protein Homology CDS 949949 951178 . - 0 ID=cds-WP_221070233.1;Parent=gene-VA249_RS18720;Dbxref=Genbank:WP_221070233.1;Name=WP_221070233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453684.1;locus_tag=VA249_RS18720;product=ABC transporter permease;protein_id=WP_221070233.1;transl_table=11 NZ_AP024166.1 RefSeq gene 951227 951973 . - . ID=gene-VA249_RS18725;Name=VA249_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18725;old_locus_tag=VYA_35340 NZ_AP024166.1 Protein Homology CDS 951227 951973 . - 0 ID=cds-WP_221070236.1;Parent=gene-VA249_RS18725;Dbxref=Genbank:WP_221070236.1;Name=WP_221070236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696204.1;locus_tag=VA249_RS18725;product=outer membrane lipoprotein-sorting protein;protein_id=WP_221070236.1;transl_table=11 NZ_AP024166.1 RefSeq gene 952840 953049 . + . ID=gene-VA249_RS18730;Name=VA249_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18730;old_locus_tag=VYA_35350 NZ_AP024166.1 Protein Homology CDS 952840 953049 . + 0 ID=cds-WP_005375625.1;Parent=gene-VA249_RS18730;Dbxref=Genbank:WP_005375625.1;Name=WP_005375625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106983.1;locus_tag=VA249_RS18730;product=cold-shock protein;protein_id=WP_005375625.1;transl_table=11 NZ_AP024166.1 RefSeq gene 953123 953668 . + . ID=gene-VA249_RS18735;Name=VA249_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18735;old_locus_tag=VYA_35360 NZ_AP024166.1 Protein Homology CDS 953123 953668 . + 0 ID=cds-WP_221070238.1;Parent=gene-VA249_RS18735;Dbxref=Genbank:WP_221070238.1;Name=WP_221070238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704736.1;locus_tag=VA249_RS18735;product=YaeQ family protein;protein_id=WP_221070238.1;transl_table=11 NZ_AP024166.1 RefSeq gene 953655 954197 . + . ID=gene-VA249_RS18740;Name=VA249_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18740;old_locus_tag=VYA_35370 NZ_AP024166.1 Protein Homology CDS 953655 954197 . + 0 ID=cds-WP_221070240.1;Parent=gene-VA249_RS18740;Dbxref=Genbank:WP_221070240.1;Name=WP_221070240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005498399.1;locus_tag=VA249_RS18740;product=hypothetical protein;protein_id=WP_221070240.1;transl_table=11 NZ_AP024166.1 RefSeq gene 954316 954675 . + . ID=gene-VA249_RS18745;Name=VA249_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18745;old_locus_tag=VYA_35380 NZ_AP024166.1 Protein Homology CDS 954316 954675 . + 0 ID=cds-WP_221070242.1;Parent=gene-VA249_RS18745;Dbxref=Genbank:WP_221070242.1;Name=WP_221070242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452490.1;locus_tag=VA249_RS18745;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_221070242.1;transl_table=11 NZ_AP024166.1 RefSeq gene 954789 955415 . - . ID=gene-VA249_RS18750;Name=VA249_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18750;old_locus_tag=VYA_35390 NZ_AP024166.1 Protein Homology CDS 954789 955415 . - 0 ID=cds-WP_221070244.1;Parent=gene-VA249_RS18750;Dbxref=Genbank:WP_221070244.1;Name=WP_221070244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129066.1;locus_tag=VA249_RS18750;product=OmpA family protein;protein_id=WP_221070244.1;transl_table=11 NZ_AP024166.1 RefSeq gene 955737 956369 . + . ID=gene-VA249_RS18755;Name=VA249_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18755;old_locus_tag=VYA_35400 NZ_AP024166.1 Protein Homology CDS 955737 956369 . + 0 ID=cds-WP_221070246.1;Parent=gene-VA249_RS18755;Dbxref=Genbank:WP_221070246.1;Name=WP_221070246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704740.1;locus_tag=VA249_RS18755;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_221070246.1;transl_table=11 NZ_AP024166.1 RefSeq gene 956384 956857 . + . ID=gene-VA249_RS18760;Name=VA249_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18760;old_locus_tag=VYA_35410 NZ_AP024166.1 Protein Homology CDS 956384 956857 . + 0 ID=cds-WP_221070249.1;Parent=gene-VA249_RS18760;Dbxref=Genbank:WP_221070249.1;Name=WP_221070249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129065.1;locus_tag=VA249_RS18760;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_221070249.1;transl_table=11 NZ_AP024166.1 RefSeq gene 956950 957843 . - . ID=gene-VA249_RS18765;Name=VA249_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18765;old_locus_tag=VYA_35420 NZ_AP024166.1 GeneMarkS-2+ CDS 956950 957843 . - 0 ID=cds-WP_221070251.1;Parent=gene-VA249_RS18765;Dbxref=Genbank:WP_221070251.1;Name=WP_221070251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18765;product=hypothetical protein;protein_id=WP_221070251.1;transl_table=11 NZ_AP024166.1 RefSeq gene 957890 960280 . - . ID=gene-VA249_RS18770;Name=VA249_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18770;old_locus_tag=VYA_35430 NZ_AP024166.1 Protein Homology CDS 957890 960280 . - 0 ID=cds-WP_221070253.1;Parent=gene-VA249_RS18770;Dbxref=Genbank:WP_221070253.1;Name=WP_221070253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453664.1;locus_tag=VA249_RS18770;product=pilus assembly protein PapC;protein_id=WP_221070253.1;transl_table=11 NZ_AP024166.1 RefSeq gene 960311 960967 . - . ID=gene-VA249_RS18775;Name=VA249_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18775;old_locus_tag=VYA_35440 NZ_AP024166.1 Protein Homology CDS 960311 960967 . - 0 ID=cds-WP_221070255.1;Parent=gene-VA249_RS18775;Dbxref=Genbank:WP_221070255.1;Name=WP_221070255.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080580.1;locus_tag=VA249_RS18775;product=fimbria/pilus periplasmic chaperone;protein_id=WP_221070255.1;transl_table=11 NZ_AP024166.1 RefSeq gene 961013 961525 . - . ID=gene-VA249_RS18780;Name=VA249_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18780;old_locus_tag=VYA_35450 NZ_AP024166.1 Protein Homology CDS 961013 961525 . - 0 ID=cds-WP_221070257.1;Parent=gene-VA249_RS18780;Dbxref=Genbank:WP_221070257.1;Name=WP_221070257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080581.1;locus_tag=VA249_RS18780;product=hypothetical protein;protein_id=WP_221070257.1;transl_table=11 NZ_AP024166.1 RefSeq gene 961699 962331 . - . ID=gene-VA249_RS18785;Name=VA249_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18785;old_locus_tag=VYA_35460 NZ_AP024166.1 Protein Homology CDS 961699 962331 . - 0 ID=cds-WP_221070260.1;Parent=gene-VA249_RS18785;Dbxref=Genbank:WP_221070260.1;Name=WP_221070260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011080582.1;locus_tag=VA249_RS18785;product=response regulator transcription factor;protein_id=WP_221070260.1;transl_table=11 NZ_AP024166.1 RefSeq gene 962646 963245 . - . ID=gene-VA249_RS18790;Name=VA249_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18790;old_locus_tag=VYA_35470 NZ_AP024166.1 Protein Homology CDS 962646 963245 . - 0 ID=cds-WP_221070262.1;Parent=gene-VA249_RS18790;Dbxref=Genbank:WP_221070262.1;Name=WP_221070262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452497.1;locus_tag=VA249_RS18790;product=beta-phosphoglucomutase family hydrolase;protein_id=WP_221070262.1;transl_table=11 NZ_AP024166.1 RefSeq gene 963322 963735 . + . ID=gene-VA249_RS18795;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=VA249_RS18795;old_locus_tag=VYA_35480 NZ_AP024166.1 Protein Homology CDS 963322 963735 . + 0 ID=cds-WP_128813108.1;Parent=gene-VA249_RS18795;Dbxref=Genbank:WP_128813108.1;Name=WP_128813108.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453654.1;locus_tag=VA249_RS18795;product=aminoacyl-tRNA hydrolase;protein_id=WP_128813108.1;transl_table=11 NZ_AP024166.1 RefSeq gene 963805 965574 . + . ID=gene-VA249_RS18800;Name=VA249_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18800;old_locus_tag=VYA_35490 NZ_AP024166.1 Protein Homology CDS 963805 965574 . + 0 ID=cds-WP_221070264.1;Parent=gene-VA249_RS18800;Dbxref=Genbank:WP_221070264.1;Name=WP_221070264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704743.1;locus_tag=VA249_RS18800;product=methyl-accepting chemotaxis protein;protein_id=WP_221070264.1;transl_table=11 NZ_AP024166.1 RefSeq gene 965775 968927 . - . ID=gene-VA249_RS18805;Name=vmeZ;gbkey=Gene;gene=vmeZ;gene_biotype=protein_coding;locus_tag=VA249_RS18805;old_locus_tag=VYA_35500 NZ_AP024166.1 Protein Homology CDS 965775 968927 . - 0 ID=cds-WP_221070266.1;Parent=gene-VA249_RS18805;Dbxref=Genbank:WP_221070266.1;Name=WP_221070266.1;gbkey=CDS;gene=vmeZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017635194.1;locus_tag=VA249_RS18805;product=multidrug efflux RND transporter permease subunit VmeZ;protein_id=WP_221070266.1;transl_table=11 NZ_AP024166.1 RefSeq gene 968936 970063 . - . ID=gene-VA249_RS18810;Name=vmeY;gbkey=Gene;gene=vmeY;gene_biotype=protein_coding;locus_tag=VA249_RS18810;old_locus_tag=VYA_35510 NZ_AP024166.1 Protein Homology CDS 968936 970063 . - 0 ID=cds-WP_221070268.1;Parent=gene-VA249_RS18810;Dbxref=Genbank:WP_221070268.1;Name=WP_221070268.1;gbkey=CDS;gene=vmeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005477351.1;locus_tag=VA249_RS18810;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221070268.1;transl_table=11 NZ_AP024166.1 RefSeq gene 970465 970923 . + . ID=gene-VA249_RS18815;Name=VA249_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18815;old_locus_tag=VYA_35520 NZ_AP024166.1 Protein Homology CDS 970465 970923 . + 0 ID=cds-WP_128813112.1;Parent=gene-VA249_RS18815;Dbxref=Genbank:WP_128813112.1;Name=WP_128813112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452507.1;locus_tag=VA249_RS18815;product=cytidine/deoxycytidylate deaminase family protein;protein_id=WP_128813112.1;transl_table=11 NZ_AP024166.1 RefSeq gene 971012 972241 . - . ID=gene-VA249_RS18820;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=VA249_RS18820;old_locus_tag=VYA_35530 NZ_AP024166.1 Protein Homology CDS 971012 972241 . - 0 ID=cds-WP_221070270.1;Parent=gene-VA249_RS18820;Dbxref=Genbank:WP_221070270.1;Name=WP_221070270.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008079807.1;locus_tag=VA249_RS18820;product=peptidase T;protein_id=WP_221070270.1;transl_table=11 NZ_AP024166.1 RefSeq gene 972406 973266 . - . ID=gene-VA249_RS18825;Name=VA249_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18825;old_locus_tag=VYA_35540 NZ_AP024166.1 Protein Homology CDS 972406 973266 . - 0 ID=cds-WP_221070272.1;Parent=gene-VA249_RS18825;Dbxref=Genbank:WP_221070272.1;Name=WP_221070272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452512.1;locus_tag=VA249_RS18825;product=DUF6279 family lipoprotein;protein_id=WP_221070272.1;transl_table=11 NZ_AP024166.1 RefSeq gene 973664 973837 . + . ID=gene-VA249_RS18830;Name=VA249_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18830;old_locus_tag=VYA_35550 NZ_AP024166.1 Protein Homology CDS 973664 973837 . + 0 ID=cds-WP_221070273.1;Parent=gene-VA249_RS18830;Dbxref=Genbank:WP_221070273.1;Name=WP_221070273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463506.1;locus_tag=VA249_RS18830;product=RNA helicase;protein_id=WP_221070273.1;transl_table=11 NZ_AP024166.1 RefSeq gene 973873 974505 . - . ID=gene-VA249_RS18835;Name=VA249_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18835;old_locus_tag=VYA_35560 NZ_AP024166.1 Protein Homology CDS 973873 974505 . - 0 ID=cds-WP_225923941.1;Parent=gene-VA249_RS18835;Dbxref=Genbank:WP_225923941.1;Name=WP_225923941.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453637.1;locus_tag=VA249_RS18835;product=response regulator;protein_id=WP_225923941.1;transl_table=11 NZ_AP024166.1 RefSeq gene 974492 976228 . - . ID=gene-VA249_RS18840;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=VA249_RS18840;old_locus_tag=VYA_35570 NZ_AP024166.1 Protein Homology CDS 974492 976228 . - 0 ID=cds-WP_221070275.1;Parent=gene-VA249_RS18840;Dbxref=Genbank:WP_221070275.1;Name=WP_221070275.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;gene=narQ;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696218.1;locus_tag=VA249_RS18840;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_221070275.1;transl_table=11 NZ_AP024166.1 RefSeq gene 976476 976961 . + . ID=gene-VA249_RS18845;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=VA249_RS18845 NZ_AP024166.1 Protein Homology CDS 976476 976961 . + 0 ID=cds-WP_221070277.1;Parent=gene-VA249_RS18845;Dbxref=Genbank:WP_221070277.1;Name=WP_221070277.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643579.1;locus_tag=VA249_RS18845;product=ferredoxin-type protein NapF;protein_id=WP_221070277.1;transl_table=11 NZ_AP024166.1 RefSeq gene 977005 977313 . + . ID=gene-VA249_RS18850;Name=VA249_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18850;old_locus_tag=VYA_35580 NZ_AP024166.1 Protein Homology CDS 977005 977313 . + 0 ID=cds-WP_128813117.1;Parent=gene-VA249_RS18850;Dbxref=Genbank:WP_128813117.1;Name=WP_128813117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005534557.1;locus_tag=VA249_RS18850;product=chaperone NapD;protein_id=WP_128813117.1;transl_table=11 NZ_AP024166.1 RefSeq gene 977310 979799 . + . ID=gene-VA249_RS18855;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=VA249_RS18855;old_locus_tag=VYA_35590 NZ_AP024166.1 Protein Homology CDS 977310 979799 . + 0 ID=cds-WP_221070279.1;Parent=gene-VA249_RS18855;Dbxref=Genbank:WP_221070279.1;Name=WP_221070279.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017069142.1;locus_tag=VA249_RS18855;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_221070279.1;transl_table=11 NZ_AP024166.1 RefSeq gene 979876 980331 . + . ID=gene-VA249_RS18860;Name=VA249_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18860;old_locus_tag=VYA_35600 NZ_AP024166.1 Protein Homology CDS 979876 980331 . + 0 ID=cds-WP_221072238.1;Parent=gene-VA249_RS18860;Dbxref=Genbank:WP_221072238.1;Name=WP_221072238.1;Ontology_term=GO:0009061;gbkey=CDS;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453623.1;locus_tag=VA249_RS18860;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_221072238.1;transl_table=11 NZ_AP024166.1 RefSeq gene 980360 980938 . + . ID=gene-VA249_RS18865;Name=VA249_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18865;old_locus_tag=VYA_35610 NZ_AP024166.1 Protein Homology CDS 980360 980938 . + 0 ID=cds-WP_221070281.1;Parent=gene-VA249_RS18865;Dbxref=Genbank:WP_221070281.1;Name=WP_221070281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740118.1;locus_tag=VA249_RS18865;product=NapC/NirT family cytochrome c;protein_id=WP_221070281.1;transl_table=11 NZ_AP024166.1 RefSeq gene 980954 981088 . + . ID=gene-VA249_RS18870;Name=VA249_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18870;old_locus_tag=VYA_35620 NZ_AP024166.1 Protein Homology CDS 980954 981088 . + 0 ID=cds-WP_082038710.1;Parent=gene-VA249_RS18870;Dbxref=Genbank:WP_082038710.1;Name=WP_082038710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463497.1;locus_tag=VA249_RS18870;product=TIGR02808 family protein;protein_id=WP_082038710.1;transl_table=11 NZ_AP024166.1 RefSeq gene 981330 983105 . - . ID=gene-VA249_RS18875;Name=phaC;gbkey=Gene;gene=phaC;gene_biotype=protein_coding;locus_tag=VA249_RS18875;old_locus_tag=VYA_35630 NZ_AP024166.1 Protein Homology CDS 981330 983105 . - 0 ID=cds-WP_221070284.1;Parent=gene-VA249_RS18875;Dbxref=Genbank:WP_221070284.1;Name=WP_221070284.1;Ontology_term=GO:0042619,GO:0016746;gbkey=CDS;gene=phaC;go_function=acyltransferase activity|0016746||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194136.1;locus_tag=VA249_RS18875;product=class I poly(R)-hydroxyalkanoic acid synthase;protein_id=WP_221070284.1;transl_table=11 NZ_AP024166.1 RefSeq gene 983170 983517 . - . ID=gene-VA249_RS18880;Name=VA249_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18880;old_locus_tag=VYA_35640 NZ_AP024166.1 Protein Homology CDS 983170 983517 . - 0 ID=cds-WP_128813122.1;Parent=gene-VA249_RS18880;Dbxref=Genbank:WP_128813122.1;Name=WP_128813122.1;Ontology_term=GO:0019752;gbkey=CDS;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841020.1;locus_tag=VA249_RS18880;product=phasin family protein;protein_id=WP_128813122.1;transl_table=11 NZ_AP024166.1 RefSeq gene 983558 984766 . - . ID=gene-VA249_RS18885;Name=VA249_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18885;old_locus_tag=VYA_35650 NZ_AP024166.1 Protein Homology CDS 983558 984766 . - 0 ID=cds-WP_221070287.1;Parent=gene-VA249_RS18885;Dbxref=Genbank:WP_221070287.1;Name=WP_221070287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532553.1;locus_tag=VA249_RS18885;product=acetyl-CoA C-acetyltransferase;protein_id=WP_221070287.1;transl_table=11 NZ_AP024166.1 RefSeq gene 984778 985518 . - . ID=gene-VA249_RS18890;Name=VA249_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18890;old_locus_tag=VYA_35660 NZ_AP024166.1 Protein Homology CDS 984778 985518 . - 0 ID=cds-WP_221070288.1;Parent=gene-VA249_RS18890;Dbxref=Genbank:WP_221070288.1;Name=WP_221070288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010643565.1;locus_tag=VA249_RS18890;product=SDR family oxidoreductase;protein_id=WP_221070288.1;transl_table=11 NZ_AP024166.1 RefSeq gene 986161 987063 . - . ID=gene-VA249_RS18895;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=VA249_RS18895;old_locus_tag=VYA_35670 NZ_AP024166.1 Protein Homology CDS 986161 987063 . - 0 ID=cds-WP_221070290.1;Parent=gene-VA249_RS18895;Dbxref=Genbank:WP_221070290.1;Name=WP_221070290.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433436.1;locus_tag=VA249_RS18895;product=protein translocase subunit SecF;protein_id=WP_221070290.1;transl_table=11 NZ_AP024166.1 RefSeq gene 987066 988904 . - . ID=gene-VA249_RS18900;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=VA249_RS18900;old_locus_tag=VYA_35680 NZ_AP024166.1 Protein Homology CDS 987066 988904 . - 0 ID=cds-WP_221070292.1;Parent=gene-VA249_RS18900;Dbxref=Genbank:WP_221070292.1;Name=WP_221070292.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730735.1;locus_tag=VA249_RS18900;product=protein translocase subunit SecD;protein_id=WP_221070292.1;transl_table=11 NZ_AP024166.1 RefSeq gene 989071 989550 . - . ID=gene-VA249_RS18905;Name=VA249_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18905;old_locus_tag=VYA_35690 NZ_AP024166.1 Protein Homology CDS 989071 989550 . - 0 ID=cds-WP_221070294.1;Parent=gene-VA249_RS18905;Dbxref=Genbank:WP_221070294.1;Name=WP_221070294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532548.1;locus_tag=VA249_RS18905;product=hypothetical protein;protein_id=WP_221070294.1;transl_table=11 NZ_AP024166.1 RefSeq gene 989815 990486 . - . ID=gene-VA249_RS18910;Name=VA249_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18910;old_locus_tag=VYA_35700 NZ_AP024166.1 Protein Homology CDS 989815 990486 . - 0 ID=cds-WP_221070297.1;Parent=gene-VA249_RS18910;Dbxref=Genbank:WP_221070297.1;Name=WP_221070297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704760.1;locus_tag=VA249_RS18910;product=SH3 domain-containing protein;protein_id=WP_221070297.1;transl_table=11 NZ_AP024166.1 RefSeq gene 991673 992125 . - . ID=gene-VA249_RS18915;Name=VA249_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18915;old_locus_tag=VYA_35730 NZ_AP024166.1 Protein Homology CDS 991673 992125 . - 0 ID=cds-WP_221070299.1;Parent=gene-VA249_RS18915;Dbxref=Genbank:WP_221070299.1;Name=WP_221070299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532544.1;locus_tag=VA249_RS18915;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_221070299.1;transl_table=11 NZ_AP024166.1 RefSeq gene 992276 993202 . + . ID=gene-VA249_RS18920;Name=VA249_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18920;old_locus_tag=VYA_35740 NZ_AP024166.1 Protein Homology CDS 992276 993202 . + 0 ID=cds-WP_221070301.1;Parent=gene-VA249_RS18920;Dbxref=Genbank:WP_221070301.1;Name=WP_221070301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442406.1;locus_tag=VA249_RS18920;product=DMT family transporter;protein_id=WP_221070301.1;transl_table=11 NZ_AP024166.1 RefSeq gene 993337 995913 . - . ID=gene-VA249_RS18925;Name=VA249_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18925;old_locus_tag=VYA_35750 NZ_AP024166.1 Protein Homology CDS 993337 995913 . - 0 ID=cds-WP_221070303.1;Parent=gene-VA249_RS18925;Dbxref=Genbank:WP_221070303.1;Name=WP_221070303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451285.1;locus_tag=VA249_RS18925;product=ATP-binding protein;protein_id=WP_221070303.1;transl_table=11 NZ_AP024166.1 RefSeq gene 995913 997010 . - . ID=gene-VA249_RS18930;Name=VA249_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18930;old_locus_tag=VYA_35760 NZ_AP024166.1 Protein Homology CDS 995913 997010 . - 0 ID=cds-WP_221070306.1;Parent=gene-VA249_RS18930;Dbxref=Genbank:WP_221070306.1;Name=WP_221070306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644882.1;locus_tag=VA249_RS18930;product=autoinducer 2-binding periplasmic protein LuxP;protein_id=WP_221070306.1;transl_table=11 NZ_AP024166.1 RefSeq gene 997287 997598 . - . ID=gene-VA249_RS18935;Name=VA249_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18935;old_locus_tag=VYA_35770 NZ_AP024166.1 Protein Homology CDS 997287 997598 . - 0 ID=cds-WP_221070308.1;Parent=gene-VA249_RS18935;Dbxref=Genbank:WP_221070308.1;Name=WP_221070308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463466.1;locus_tag=VA249_RS18935;product=GIY-YIG nuclease family protein;protein_id=WP_221070308.1;transl_table=11 NZ_AP024166.1 RefSeq gene 997595 998248 . - . ID=gene-VA249_RS18940;Name=VA249_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18940;old_locus_tag=VYA_35780 NZ_AP024166.1 Protein Homology CDS 997595 998248 . - 0 ID=cds-WP_128813131.1;Parent=gene-VA249_RS18940;Dbxref=Genbank:WP_128813131.1;Name=WP_128813131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704768.1;locus_tag=VA249_RS18940;product=YceH family protein;protein_id=WP_128813131.1;transl_table=11 NZ_AP024166.1 RefSeq gene 998342 998545 . - . ID=gene-VA249_RS18945;Name=VA249_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18945;old_locus_tag=VYA_35790 NZ_AP024166.1 Protein Homology CDS 998342 998545 . - 0 ID=cds-WP_223917805.1;Parent=gene-VA249_RS18945;Dbxref=Genbank:WP_223917805.1;Name=WP_223917805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433391.1;locus_tag=VA249_RS18945;product=hypothetical protein;protein_id=WP_223917805.1;transl_table=11 NZ_AP024166.1 RefSeq gene 998786 999100 . + . ID=gene-VA249_RS18950;Name=VA249_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18950;old_locus_tag=VYA_35800 NZ_AP024166.1 Protein Homology CDS 998786 999100 . + 0 ID=cds-WP_005442423.1;Parent=gene-VA249_RS18950;Dbxref=Genbank:WP_005442423.1;Name=WP_005442423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004730049.1;locus_tag=VA249_RS18950;product=DUF496 family protein;protein_id=WP_005442423.1;transl_table=11 NZ_AP024166.1 RefSeq gene 999224 1000558 . + . ID=gene-VA249_RS18955;Name=VA249_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18955;old_locus_tag=VYA_35810 NZ_AP024166.1 Protein Homology CDS 999224 1000558 . + 0 ID=cds-WP_221070310.1;Parent=gene-VA249_RS18955;Dbxref=Genbank:WP_221070310.1;Name=WP_221070310.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453572.1;locus_tag=VA249_RS18955;product=MATE family efflux transporter;protein_id=WP_221070310.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1000755 1001747 . - . ID=gene-VA249_RS18960;Name=VA249_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18960;old_locus_tag=VYA_35820 NZ_AP024166.1 Protein Homology CDS 1000755 1001747 . - 0 ID=cds-WP_221070312.1;Parent=gene-VA249_RS18960;Dbxref=Genbank:WP_221070312.1;Name=WP_221070312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005304227.1;locus_tag=VA249_RS18960;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_221070312.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1002407 1003843 . + . ID=gene-VA249_RS18965;Name=VA249_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18965;old_locus_tag=VYA_35830 NZ_AP024166.1 Protein Homology CDS 1002407 1003843 . + 0 ID=cds-WP_221070313.1;Parent=gene-VA249_RS18965;Dbxref=Genbank:WP_221070313.1;Name=WP_221070313.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006879804.1;locus_tag=VA249_RS18965;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_221070313.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1003975 1004619 . - . ID=gene-VA249_RS18970;Name=VA249_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18970;old_locus_tag=VYA_35840 NZ_AP024166.1 Protein Homology CDS 1003975 1004619 . - 0 ID=cds-WP_221070315.1;Parent=gene-VA249_RS18970;Dbxref=Genbank:WP_221070315.1;Name=WP_221070315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=VA249_RS18970;product=helix-turn-helix domain-containing protein;protein_id=WP_221070315.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1004915 1005160 . - . ID=gene-VA249_RS18975;Name=VA249_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18975;old_locus_tag=VYA_35850 NZ_AP024166.1 GeneMarkS-2+ CDS 1004915 1005160 . - 0 ID=cds-WP_221070317.1;Parent=gene-VA249_RS18975;Dbxref=Genbank:WP_221070317.1;Name=WP_221070317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18975;product=hypothetical protein;protein_id=WP_221070317.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1005391 1005927 . - . ID=gene-VA249_RS18980;Name=VA249_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18980;old_locus_tag=VYA_35870 NZ_AP024166.1 Protein Homology CDS 1005391 1005927 . - 0 ID=cds-WP_221070319.1;Parent=gene-VA249_RS18980;Dbxref=Genbank:WP_221070319.1;Name=WP_221070319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004411442.1;locus_tag=VA249_RS18980;product=phosphatase PAP2 family protein;protein_id=WP_221070319.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1005940 1006269 . - . ID=gene-VA249_RS18985;Name=VA249_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18985;old_locus_tag=VYA_35880 NZ_AP024166.1 GeneMarkS-2+ CDS 1005940 1006269 . - 0 ID=cds-WP_221070321.1;Parent=gene-VA249_RS18985;Dbxref=Genbank:WP_221070321.1;Name=WP_221070321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18985;product=hypothetical protein;protein_id=WP_221070321.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1006375 1009128 . - . ID=gene-VA249_RS18990;Name=VA249_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18990;old_locus_tag=VYA_35890 NZ_AP024166.1 Protein Homology CDS 1006375 1009128 . - 0 ID=cds-WP_221070323.1;Parent=gene-VA249_RS18990;Dbxref=Genbank:WP_221070323.1;Name=WP_221070323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.2;locus_tag=VA249_RS18990;product=YadA-like family protein;protein_id=WP_221070323.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1009243 1010088 . - . ID=gene-VA249_RS18995;Name=VA249_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS18995;old_locus_tag=VYA_35900 NZ_AP024166.1 GeneMarkS-2+ CDS 1009243 1010088 . - 0 ID=cds-WP_221070325.1;Parent=gene-VA249_RS18995;Dbxref=Genbank:WP_221070325.1;Name=WP_221070325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS18995;product=hypothetical protein;protein_id=WP_221070325.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1010340 1011200 . - . ID=gene-VA249_RS19000;Name=VA249_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19000;old_locus_tag=VYA_35910 NZ_AP024166.1 Protein Homology CDS 1010340 1011200 . - 0 ID=cds-WP_221070327.1;Parent=gene-VA249_RS19000;Dbxref=Genbank:WP_221070327.1;Name=WP_221070327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004744313.1;locus_tag=VA249_RS19000;product=autotransporter domain-containing protein;protein_id=WP_221070327.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1011263 1012453 . - . ID=gene-VA249_RS19005;Name=VA249_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19005;old_locus_tag=VYA_35920 NZ_AP024166.1 Protein Homology CDS 1011263 1012453 . - 0 ID=cds-WP_221070328.1;Parent=gene-VA249_RS19005;Dbxref=Genbank:WP_221070328.1;Name=WP_221070328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040521.1;locus_tag=VA249_RS19005;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_221070328.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1012821 1014212 . - . ID=gene-VA249_RS19010;Name=VA249_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19010;old_locus_tag=VYA_35930 NZ_AP024166.1 Protein Homology CDS 1012821 1014212 . - 0 ID=cds-WP_221070329.1;Parent=gene-VA249_RS19010;Dbxref=Genbank:WP_221070329.1;Name=WP_221070329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=VA249_RS19010;product=serine hydrolase;protein_id=WP_221070329.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1014315 1015589 . - . ID=gene-VA249_RS19015;Name=VA249_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19015;old_locus_tag=VYA_35940 NZ_AP024166.1 Protein Homology CDS 1014315 1015589 . - 0 ID=cds-WP_221070330.1;Parent=gene-VA249_RS19015;Dbxref=Genbank:WP_221070330.1;Name=WP_221070330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004411447.1;locus_tag=VA249_RS19015;product=serine hydrolase;protein_id=WP_221070330.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1016073 1016339 . - . ID=gene-VA249_RS19020;Name=VA249_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19020;old_locus_tag=VYA_35950 NZ_AP024166.1 Protein Homology CDS 1016073 1016339 . - 0 ID=cds-WP_221070331.1;Parent=gene-VA249_RS19020;Dbxref=Genbank:WP_221070331.1;Name=WP_221070331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024212.2;locus_tag=VA249_RS19020;product=helix-turn-helix domain-containing protein;protein_id=WP_221070331.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1016642 1017034 . - . ID=gene-VA249_RS19025;Name=VA249_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19025;old_locus_tag=VYA_35960 NZ_AP024166.1 GeneMarkS-2+ CDS 1016642 1017034 . - 0 ID=cds-WP_221070332.1;Parent=gene-VA249_RS19025;Dbxref=Genbank:WP_221070332.1;Name=WP_221070332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19025;product=hypothetical protein;protein_id=WP_221070332.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1017443 1017664 . + . ID=gene-VA249_RS19030;Name=VA249_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19030;old_locus_tag=VYA_35970 NZ_AP024166.1 Protein Homology CDS 1017443 1017664 . + 0 ID=cds-WP_221070333.1;Parent=gene-VA249_RS19030;Dbxref=Genbank:WP_221070333.1;Name=WP_221070333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005373607.1;locus_tag=VA249_RS19030;product=hypothetical protein;protein_id=WP_221070333.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1017862 1018476 . - . ID=gene-VA249_RS19035;Name=VA249_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19035;old_locus_tag=VYA_35980 NZ_AP024166.1 Protein Homology CDS 1017862 1018476 . - 0 ID=cds-WP_221070334.1;Parent=gene-VA249_RS19035;Dbxref=Genbank:WP_221070334.1;Name=WP_221070334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020334140.1;locus_tag=VA249_RS19035;product=LysE family translocator;protein_id=WP_221070334.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1018655 1019569 . - . ID=gene-VA249_RS19040;Name=VA249_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19040;old_locus_tag=VYA_35990 NZ_AP024166.1 Protein Homology CDS 1018655 1019569 . - 0 ID=cds-WP_221070335.1;Parent=gene-VA249_RS19040;Dbxref=Genbank:WP_221070335.1;Name=WP_221070335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447356.1;locus_tag=VA249_RS19040;product=LysR family transcriptional regulator;protein_id=WP_221070335.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1019559 1019936 . - . ID=gene-VA249_RS19045;Name=VA249_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19045;old_locus_tag=VYA_36000 NZ_AP024166.1 Protein Homology CDS 1019559 1019936 . - 0 ID=cds-WP_221070336.1;Parent=gene-VA249_RS19045;Dbxref=Genbank:WP_221070336.1;Name=WP_221070336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644902.1;locus_tag=VA249_RS19045;product=nuclear transport factor 2 family protein;protein_id=WP_221070336.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1020189 1023239 . - . ID=gene-VA249_RS19050;Name=VA249_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19050;old_locus_tag=VYA_36010 NZ_AP024166.1 Protein Homology CDS 1020189 1023239 . - 0 ID=cds-WP_221072240.1;Parent=gene-VA249_RS19050;Dbxref=Genbank:WP_221072240.1;Name=WP_221072240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350250.1;locus_tag=VA249_RS19050;product=efflux RND transporter permease subunit;protein_id=WP_221072240.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1023242 1024336 . - . ID=gene-VA249_RS19055;Name=VA249_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19055;old_locus_tag=VYA_36020 NZ_AP024166.1 Protein Homology CDS 1023242 1024336 . - 0 ID=cds-WP_221070337.1;Parent=gene-VA249_RS19055;Dbxref=Genbank:WP_221070337.1;Name=WP_221070337.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002535107.1;locus_tag=VA249_RS19055;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221070337.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1024535 1025161 . + . ID=gene-VA249_RS19060;Name=VA249_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19060;old_locus_tag=VYA_36030 NZ_AP024166.1 Protein Homology CDS 1024535 1025161 . + 0 ID=cds-WP_221070338.1;Parent=gene-VA249_RS19060;Dbxref=Genbank:WP_221070338.1;Name=WP_221070338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704780.1;locus_tag=VA249_RS19060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221070338.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1025192 1026637 . - . ID=gene-VA249_RS19065;Name=VA249_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19065;old_locus_tag=VYA_36040 NZ_AP024166.1 Protein Homology CDS 1025192 1026637 . - 0 ID=cds-WP_221072242.1;Parent=gene-VA249_RS19065;Dbxref=Genbank:WP_221072242.1;Name=WP_221072242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451249.1;locus_tag=VA249_RS19065;product=PLP-dependent aminotransferase family protein;protein_id=WP_221072242.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1026740 1027396 . + . ID=gene-VA249_RS19070;Name=VA249_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19070;old_locus_tag=VYA_36050 NZ_AP024166.1 Protein Homology CDS 1026740 1027396 . + 0 ID=cds-WP_221070339.1;Parent=gene-VA249_RS19070;Dbxref=Genbank:WP_221070339.1;Name=WP_221070339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819872.1;locus_tag=VA249_RS19070;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_221070339.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1027461 1028462 . - . ID=gene-VA249_RS19075;Name=VA249_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19075;old_locus_tag=VYA_36060 NZ_AP024166.1 Protein Homology CDS 1027461 1028462 . - 0 ID=cds-WP_221070340.1;Parent=gene-VA249_RS19075;Dbxref=Genbank:WP_221070340.1;Name=WP_221070340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006960662.1;locus_tag=VA249_RS19075;product=AraC family transcriptional regulator ligand-binding domain-containing protein;protein_id=WP_221070340.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1028570 1028896 . + . ID=gene-VA249_RS19080;Name=VA249_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19080;old_locus_tag=VYA_36070 NZ_AP024166.1 Protein Homology CDS 1028570 1028896 . + 0 ID=cds-WP_221070341.1;Parent=gene-VA249_RS19080;Dbxref=Genbank:WP_221070341.1;Name=WP_221070341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433326.1;locus_tag=VA249_RS19080;product=MFS transporter;protein_id=WP_221070341.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1028896 1030119 . + . ID=gene-VA249_RS19085;Name=VA249_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19085;old_locus_tag=VYA_36080 NZ_AP024166.1 Protein Homology CDS 1028896 1030119 . + 0 ID=cds-WP_221070342.1;Parent=gene-VA249_RS19085;Dbxref=Genbank:WP_221070342.1;Name=WP_221070342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600299.1;locus_tag=VA249_RS19085;product=biotin/lipoyl-binding protein;protein_id=WP_221070342.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1030304 1031638 . + . ID=gene-VA249_RS19090;Name=VA249_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19090;old_locus_tag=VYA_36090 NZ_AP024166.1 Protein Homology CDS 1030304 1031638 . + 0 ID=cds-WP_221070345.1;Parent=gene-VA249_RS19090;Dbxref=Genbank:WP_221070345.1;Name=WP_221070345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017110035.1;locus_tag=VA249_RS19090;product=AarF/ABC1/UbiB kinase family protein;protein_id=WP_221070345.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1031836 1033182 . + . ID=gene-VA249_RS19095;Name=VA249_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19095;old_locus_tag=VYA_36100 NZ_AP024166.1 Protein Homology CDS 1031836 1033182 . + 0 ID=cds-WP_221070347.1;Parent=gene-VA249_RS19095;Dbxref=Genbank:WP_221070347.1;Name=WP_221070347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006224.1;locus_tag=VA249_RS19095;product=magnesium transporter;protein_id=WP_221070347.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1033808 1035046 . + . ID=gene-VA249_RS19100;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=VA249_RS19100;old_locus_tag=VYA_36110 NZ_AP024166.1 Protein Homology CDS 1033808 1035046 . + 0 ID=cds-WP_221070350.1;Parent=gene-VA249_RS19100;Dbxref=Genbank:WP_221070350.1;Name=WP_221070350.1;Ontology_term=GO:0055085,GO:0015209,GO:0016021;gbkey=CDS;gene=codB;go_component=integral component of membrane|0016021||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453535.1;locus_tag=VA249_RS19100;product=cytosine permease;protein_id=WP_221070350.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1035056 1036333 . + . ID=gene-VA249_RS19105;Name=VA249_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19105;old_locus_tag=VYA_36120 NZ_AP024166.1 Protein Homology CDS 1035056 1036333 . + 0 ID=cds-WP_221070351.1;Parent=gene-VA249_RS19105;Dbxref=Genbank:WP_221070351.1;Name=WP_221070351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019823386.1;locus_tag=VA249_RS19105;product=cytosine deaminase;protein_id=WP_221070351.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1036400 1036582 . - . ID=gene-VA249_RS19110;Name=VA249_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19110;old_locus_tag=VYA_36130 NZ_AP024166.1 Protein Homology CDS 1036400 1036582 . - 0 ID=cds-WP_221070354.1;Parent=gene-VA249_RS19110;Dbxref=Genbank:WP_221070354.1;Name=WP_221070354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704791.1;locus_tag=VA249_RS19110;product=hypothetical protein;protein_id=WP_221070354.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1036884 1037648 . + . ID=gene-VA249_RS19115;Name=VA249_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19115;old_locus_tag=VYA_36140 NZ_AP024166.1 Protein Homology CDS 1036884 1037648 . + 0 ID=cds-WP_221070355.1;Parent=gene-VA249_RS19115;Dbxref=Genbank:WP_221070355.1;Name=WP_221070355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696250.1;locus_tag=VA249_RS19115;product=hypothetical protein;protein_id=WP_221070355.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1037773 1038444 . + . ID=gene-VA249_RS19120;Name=VA249_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19120;old_locus_tag=VYA_36150 NZ_AP024166.1 Protein Homology CDS 1037773 1038444 . + 0 ID=cds-WP_221070357.1;Parent=gene-VA249_RS19120;Dbxref=Genbank:WP_221070357.1;Name=WP_221070357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442464.1;locus_tag=VA249_RS19120;product=HD domain-containing protein;protein_id=WP_221070357.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1038648 1039265 . + . ID=gene-VA249_RS19125;Name=VA249_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19125;old_locus_tag=VYA_36160 NZ_AP024166.1 Protein Homology CDS 1038648 1039265 . + 0 ID=cds-WP_221070360.1;Parent=gene-VA249_RS19125;Dbxref=Genbank:WP_221070360.1;Name=WP_221070360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453520.1;locus_tag=VA249_RS19125;product=triacylglycerol lipase;protein_id=WP_221070360.1;transl_table=11 NZ_AP024166.1 cmsearch riboswitch 1039389 1039529 . + . ID=id-NZ_AP024166.1:1039389..1039529;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024166.1 RefSeq gene 1039741 1040397 . + . ID=gene-VA249_RS19130;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=VA249_RS19130;old_locus_tag=VYA_36170 NZ_AP024166.1 Protein Homology CDS 1039741 1040397 . + 0 ID=cds-WP_221070362.1;Parent=gene-VA249_RS19130;Dbxref=Genbank:WP_221070362.1;Name=WP_221070362.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001076639.1;locus_tag=VA249_RS19130;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_221070362.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1040518 1041063 . + . ID=gene-VA249_RS19135;Name=VA249_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19135;old_locus_tag=VYA_36180 NZ_AP024166.1 Protein Homology CDS 1040518 1041063 . + 0 ID=cds-WP_221070373.1;Parent=gene-VA249_RS19135;Dbxref=Genbank:WP_221070373.1;Name=WP_221070373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016768500.1;locus_tag=VA249_RS19135;product=glutathione peroxidase;protein_id=WP_221070373.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1041074 1041520 . + . ID=gene-VA249_RS19140;Name=VA249_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19140;old_locus_tag=VYA_36190 NZ_AP024166.1 Protein Homology CDS 1041074 1041520 . + 0 ID=cds-WP_221070375.1;Parent=gene-VA249_RS19140;Dbxref=Genbank:WP_221070375.1;Name=WP_221070375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188703.1;locus_tag=VA249_RS19140;product=DUF3429 family protein;protein_id=WP_221070375.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1041633 1042232 . - . ID=gene-VA249_RS19145;Name=VA249_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19145;old_locus_tag=VYA_36200 NZ_AP024166.1 Protein Homology CDS 1041633 1042232 . - 0 ID=cds-WP_211916743.1;Parent=gene-VA249_RS19145;Dbxref=Genbank:WP_211916743.1;Name=WP_211916743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005535261.1;locus_tag=VA249_RS19145;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_211916743.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1042391 1042768 . - . ID=gene-VA249_RS19150;Name=VA249_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19150;old_locus_tag=VYA_36210 NZ_AP024166.1 Protein Homology CDS 1042391 1042768 . - 0 ID=cds-WP_221070377.1;Parent=gene-VA249_RS19150;Dbxref=Genbank:WP_221070377.1;Name=WP_221070377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188701.1;locus_tag=VA249_RS19150;product=hypothetical protein;protein_id=WP_221070377.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1042960 1043265 . + . ID=gene-VA249_RS19155;Name=VA249_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19155;old_locus_tag=VYA_36220 NZ_AP024166.1 Protein Homology CDS 1042960 1043265 . + 0 ID=cds-WP_211916739.1;Parent=gene-VA249_RS19155;Dbxref=Genbank:WP_211916739.1;Name=WP_211916739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453509.1;locus_tag=VA249_RS19155;product=isoamylase early set domain-containing protein;protein_id=WP_211916739.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1043552 1044271 . + . ID=gene-VA249_RS19160;Name=VA249_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19160;old_locus_tag=VYA_36230 NZ_AP024166.1 Protein Homology CDS 1043552 1044271 . + 0 ID=cds-WP_221070379.1;Parent=gene-VA249_RS19160;Dbxref=Genbank:WP_221070379.1;Name=WP_221070379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188700.1;locus_tag=VA249_RS19160;product=SDR family oxidoreductase;protein_id=WP_221070379.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1044495 1045202 . + . ID=gene-VA249_RS19165;Name=VA249_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19165;old_locus_tag=VYA_36240 NZ_AP024166.1 Protein Homology CDS 1044495 1045202 . + 0 ID=cds-WP_221070381.1;Parent=gene-VA249_RS19165;Dbxref=Genbank:WP_221070381.1;Name=WP_221070381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010451193.1;locus_tag=VA249_RS19165;product=response regulator transcription factor;protein_id=WP_221070381.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1045205 1046509 . + . ID=gene-VA249_RS19170;Name=VA249_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19170;old_locus_tag=VYA_36250 NZ_AP024166.1 Protein Homology CDS 1045205 1046509 . + 0 ID=cds-WP_221070383.1;Parent=gene-VA249_RS19170;Dbxref=Genbank:WP_221070383.1;Name=WP_221070383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741195.1;locus_tag=VA249_RS19170;product=ATP-binding protein;protein_id=WP_221070383.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 1046675 1047067 . + . ID=gene-VA249_RS19175;Name=VA249_RS19175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS19175;pseudo=true NZ_AP024166.1 Protein Homology CDS 1046675 1047067 . + 0 ID=cds-VA249_RS19175;Parent=gene-VA249_RS19175;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819329.1;locus_tag=VA249_RS19175;product=glycine zipper family protein;pseudo=true;transl_table=11 NZ_AP024166.1 RefSeq gene 1047395 1049047 . + . ID=gene-VA249_RS19180;Name=VA249_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19180;old_locus_tag=VYA_36280 NZ_AP024166.1 Protein Homology CDS 1047395 1049047 . + 0 ID=cds-WP_221070385.1;Parent=gene-VA249_RS19180;Dbxref=Genbank:WP_221070385.1;Name=WP_221070385.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644956.1;locus_tag=VA249_RS19180;product=phosphoethanolamine--lipid A transferase;protein_id=WP_221070385.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1049280 1049999 . + . ID=gene-VA249_RS19185;Name=VA249_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19185;old_locus_tag=VYA_36290 NZ_AP024166.1 Protein Homology CDS 1049280 1049999 . + 0 ID=cds-WP_221070388.1;Parent=gene-VA249_RS19185;Dbxref=Genbank:WP_221070388.1;Name=WP_221070388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194087.1;locus_tag=VA249_RS19185;product=hypothetical protein;protein_id=WP_221070388.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1050172 1050321 . + . ID=gene-VA249_RS19190;Name=VA249_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19190 NZ_AP024166.1 Protein Homology CDS 1050172 1050321 . + 0 ID=cds-WP_211916724.1;Parent=gene-VA249_RS19190;Dbxref=Genbank:WP_211916724.1;Name=WP_211916724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696272.1;locus_tag=VA249_RS19190;product=hypothetical protein;protein_id=WP_211916724.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1050334 1051548 . + . ID=gene-VA249_RS19195;Name=VA249_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19195;old_locus_tag=VYA_36300 NZ_AP024166.1 Protein Homology CDS 1050334 1051548 . + 0 ID=cds-WP_221070399.1;Parent=gene-VA249_RS19195;Dbxref=Genbank:WP_221070399.1;Name=WP_221070399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442515.1;locus_tag=VA249_RS19195;product=MFS transporter;protein_id=WP_221070399.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1051734 1052165 . + . ID=gene-VA249_RS19200;Name=VA249_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19200;old_locus_tag=VYA_36310 NZ_AP024166.1 Protein Homology CDS 1051734 1052165 . + 0 ID=cds-WP_211916720.1;Parent=gene-VA249_RS19200;Dbxref=Genbank:WP_211916720.1;Name=WP_211916720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005373685.1;locus_tag=VA249_RS19200;product=YccF domain-containing protein;protein_id=WP_211916720.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1052276 1052926 . - . ID=gene-VA249_RS19205;Name=VA249_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19205;old_locus_tag=VYA_36320 NZ_AP024166.1 Protein Homology CDS 1052276 1052926 . - 0 ID=cds-WP_221070401.1;Parent=gene-VA249_RS19205;Dbxref=Genbank:WP_221070401.1;Name=WP_221070401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194085.1;locus_tag=VA249_RS19205;product=hypothetical protein;protein_id=WP_221070401.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1053103 1054056 . - . ID=gene-VA249_RS19210;Name=VA249_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19210;old_locus_tag=VYA_36330 NZ_AP024166.1 Protein Homology CDS 1053103 1054056 . - 0 ID=cds-WP_221070403.1;Parent=gene-VA249_RS19210;Dbxref=Genbank:WP_221070403.1;Name=WP_221070403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696275.1;locus_tag=VA249_RS19210;product=hypothetical protein;protein_id=WP_221070403.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1054137 1054319 . + . ID=gene-VA249_RS19215;Name=VA249_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19215;old_locus_tag=VYA_36340 NZ_AP024166.1 GeneMarkS-2+ CDS 1054137 1054319 . + 0 ID=cds-WP_221070405.1;Parent=gene-VA249_RS19215;Dbxref=Genbank:WP_221070405.1;Name=WP_221070405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19215;product=hypothetical protein;protein_id=WP_221070405.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1054351 1055295 . - . ID=gene-VA249_RS19220;Name=VA249_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19220;old_locus_tag=VYA_36350 NZ_AP024166.1 Protein Homology CDS 1054351 1055295 . - 0 ID=cds-WP_221070407.1;Parent=gene-VA249_RS19220;Dbxref=Genbank:WP_221070407.1;Name=WP_221070407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433519.1;locus_tag=VA249_RS19220;product=LysR family transcriptional regulator;protein_id=WP_221070407.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1055520 1056137 . + . ID=gene-VA249_RS19225;Name=VA249_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19225;old_locus_tag=VYA_36360 NZ_AP024166.1 Protein Homology CDS 1055520 1056137 . + 0 ID=cds-WP_221070409.1;Parent=gene-VA249_RS19225;Dbxref=Genbank:WP_221070409.1;Name=WP_221070409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005442521.1;locus_tag=VA249_RS19225;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_221070409.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1056134 1058092 . + . ID=gene-VA249_RS19230;Name=VA249_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19230;old_locus_tag=VYA_36370 NZ_AP024166.1 Protein Homology CDS 1056134 1058092 . + 0 ID=cds-WP_221070411.1;Parent=gene-VA249_RS19230;Dbxref=Genbank:WP_221070411.1;Name=WP_221070411.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529828.1;locus_tag=VA249_RS19230;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_221070411.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1058168 1058461 . - . ID=gene-VA249_RS19235;Name=VA249_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19235;old_locus_tag=VYA_36380 NZ_AP024166.1 Protein Homology CDS 1058168 1058461 . - 0 ID=cds-WP_221070414.1;Parent=gene-VA249_RS19235;Dbxref=Genbank:WP_221070414.1;Name=WP_221070414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999500.1;locus_tag=VA249_RS19235;product=hypothetical protein;protein_id=WP_221070414.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1058608 1059477 . - . ID=gene-VA249_RS19240;Name=VA249_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19240;old_locus_tag=VYA_36390 NZ_AP024166.1 Protein Homology CDS 1058608 1059477 . - 0 ID=cds-WP_221070416.1;Parent=gene-VA249_RS19240;Dbxref=Genbank:WP_221070416.1;Name=WP_221070416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006069650.1;locus_tag=VA249_RS19240;product=LysR family transcriptional regulator;protein_id=WP_221070416.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1059597 1059968 . + . ID=gene-VA249_RS19245;Name=VA249_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19245;old_locus_tag=VYA_36400 NZ_AP024166.1 Protein Homology CDS 1059597 1059968 . + 0 ID=cds-WP_128813170.1;Parent=gene-VA249_RS19245;Dbxref=Genbank:WP_128813170.1;Name=WP_128813170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696409.1;locus_tag=VA249_RS19245;product=nuclear transport factor 2 family protein;protein_id=WP_128813170.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1060046 1061188 . - . ID=gene-VA249_RS19250;Name=VA249_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19250;old_locus_tag=VYA_36410 NZ_AP024166.1 Protein Homology CDS 1060046 1061188 . - 0 ID=cds-WP_221070418.1;Parent=gene-VA249_RS19250;Dbxref=Genbank:WP_221070418.1;Name=WP_221070418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194082.1;locus_tag=VA249_RS19250;product=permease;protein_id=WP_221070418.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1061438 1061731 . + . ID=gene-VA249_RS19255;Name=VA249_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19255;old_locus_tag=VYA_36420 NZ_AP024166.1 Protein Homology CDS 1061438 1061731 . + 0 ID=cds-WP_128813171.1;Parent=gene-VA249_RS19255;Dbxref=Genbank:WP_128813171.1;Name=WP_128813171.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433559.1;locus_tag=VA249_RS19255;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_128813171.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1061718 1062278 . + . ID=gene-VA249_RS19260;Name=sigZ;gbkey=Gene;gene=sigZ;gene_biotype=protein_coding;locus_tag=VA249_RS19260;old_locus_tag=VYA_36430 NZ_AP024166.1 Protein Homology CDS 1061718 1062278 . + 0 ID=cds-WP_221070420.1;Parent=gene-VA249_RS19260;Dbxref=Genbank:WP_221070420.1;Name=WP_221070420.1;gbkey=CDS;gene=sigZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818610.1;locus_tag=VA249_RS19260;product=RNA polymerase sigma factor SigZ;protein_id=WP_221070420.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1062536 1063885 . - . ID=gene-VA249_RS19265;Name=VA249_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19265;old_locus_tag=VYA_36440 NZ_AP024166.1 Protein Homology CDS 1062536 1063885 . - 0 ID=cds-WP_221070422.1;Parent=gene-VA249_RS19265;Dbxref=Genbank:WP_221070422.1;Name=WP_221070422.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818605.1;locus_tag=VA249_RS19265;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_221070422.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1064403 1064681 . - . ID=gene-VA249_RS19270;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=VA249_RS19270;old_locus_tag=VYA_36450 NZ_AP024166.1 Protein Homology CDS 1064403 1064681 . - 0 ID=cds-WP_128813174.1;Parent=gene-VA249_RS19270;Dbxref=Genbank:WP_128813174.1;Name=WP_128813174.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008215675.1;locus_tag=VA249_RS19270;product=peptidylprolyl isomerase PpiC;protein_id=WP_128813174.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1064989 1065903 . + . ID=gene-VA249_RS19275;Name=VA249_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19275;old_locus_tag=VYA_36460 NZ_AP024166.1 Protein Homology CDS 1064989 1065903 . + 0 ID=cds-WP_221070424.1;Parent=gene-VA249_RS19275;Dbxref=Genbank:WP_221070424.1;Name=WP_221070424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335367.1;locus_tag=VA249_RS19275;product=chemotaxis protein;protein_id=WP_221070424.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1065972 1066520 . - . ID=gene-VA249_RS19280;Name=VA249_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19280;old_locus_tag=VYA_36470 NZ_AP024166.1 Protein Homology CDS 1065972 1066520 . - 0 ID=cds-WP_221070426.1;Parent=gene-VA249_RS19280;Dbxref=Genbank:WP_221070426.1;Name=WP_221070426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818601.1;locus_tag=VA249_RS19280;product=ATP:cob(I)alamin adenosyltransferase;protein_id=WP_221070426.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1066607 1067137 . - . ID=gene-VA249_RS19285;Name=hutZ;gbkey=Gene;gene=hutZ;gene_biotype=protein_coding;locus_tag=VA249_RS19285;old_locus_tag=VYA_36480 NZ_AP024166.1 Protein Homology CDS 1066607 1067137 . - 0 ID=cds-WP_005441121.1;Parent=gene-VA249_RS19285;Dbxref=Genbank:WP_005441121.1;Name=WP_005441121.1;Ontology_term=GO:0042167,GO:0020037;gbkey=CDS;gene=hutZ;go_function=heme binding|0020037||IEA;go_process=heme catabolic process|0042167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005498228.1;locus_tag=VA249_RS19285;product=heme utilization protein HutZ;protein_id=WP_005441121.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1067252 1067755 . - . ID=gene-VA249_RS19290;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=VA249_RS19290;old_locus_tag=VYA_36490 NZ_AP024166.1 Protein Homology CDS 1067252 1067755 . - 0 ID=cds-WP_221070428.1;Parent=gene-VA249_RS19290;Dbxref=Genbank:WP_221070428.1;Name=WP_221070428.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452642.1;locus_tag=VA249_RS19290;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_221070428.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1067799 1069166 . - . ID=gene-VA249_RS19295;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=VA249_RS19295;old_locus_tag=VYA_36500 NZ_AP024166.1 Protein Homology CDS 1067799 1069166 . - 0 ID=cds-WP_221070431.1;Parent=gene-VA249_RS19295;Dbxref=Genbank:WP_221070431.1;Name=WP_221070431.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447907.1;locus_tag=VA249_RS19295;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_221070431.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1069334 1070107 . + . ID=gene-VA249_RS19300;Name=VA249_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19300;old_locus_tag=VYA_36510 NZ_AP024166.1 Protein Homology CDS 1069334 1070107 . + 0 ID=cds-WP_221070433.1;Parent=gene-VA249_RS19300;Dbxref=Genbank:WP_221070433.1;Name=WP_221070433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818599.1;locus_tag=VA249_RS19300;product=energy transducer TonB;protein_id=WP_221070433.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1070107 1070805 . + . ID=gene-VA249_RS19305;Name=VA249_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19305;old_locus_tag=VYA_36520 NZ_AP024166.1 Protein Homology CDS 1070107 1070805 . + 0 ID=cds-WP_221070435.1;Parent=gene-VA249_RS19305;Dbxref=Genbank:WP_221070435.1;Name=WP_221070435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452647.1;locus_tag=VA249_RS19305;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_221070435.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1070802 1071212 . + . ID=gene-VA249_RS19310;Name=VA249_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19310;old_locus_tag=VYA_36530 NZ_AP024166.1 Protein Homology CDS 1070802 1071212 . + 0 ID=cds-WP_221070436.1;Parent=gene-VA249_RS19310;Dbxref=Genbank:WP_221070436.1;Name=WP_221070436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190797.1;locus_tag=VA249_RS19310;product=biopolymer transporter ExbD;protein_id=WP_221070436.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1071239 1072129 . + . ID=gene-VA249_RS19315;Name=VA249_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19315;old_locus_tag=VYA_36540 NZ_AP024166.1 Protein Homology CDS 1071239 1072129 . + 0 ID=cds-WP_221070437.1;Parent=gene-VA249_RS19315;Dbxref=Genbank:WP_221070437.1;Name=WP_221070437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433515.1;locus_tag=VA249_RS19315;product=ABC transporter substrate-binding protein;protein_id=WP_221070437.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1072139 1073176 . + . ID=gene-VA249_RS19320;Name=VA249_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19320;old_locus_tag=VYA_36550 NZ_AP024166.1 Protein Homology CDS 1072139 1073176 . + 0 ID=cds-WP_221070438.1;Parent=gene-VA249_RS19320;Dbxref=Genbank:WP_221070438.1;Name=WP_221070438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194069.1;locus_tag=VA249_RS19320;product=iron ABC transporter permease;protein_id=WP_221070438.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1073176 1073958 . + . ID=gene-VA249_RS19325;Name=VA249_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19325;old_locus_tag=VYA_36560 NZ_AP024166.1 Protein Homology CDS 1073176 1073958 . + 0 ID=cds-WP_221070439.1;Parent=gene-VA249_RS19325;Dbxref=Genbank:WP_221070439.1;Name=WP_221070439.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009840967.1;locus_tag=VA249_RS19325;product=heme ABC transporter ATP-binding protein;protein_id=WP_221070439.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1074108 1074569 . - . ID=gene-VA249_RS19330;Name=VA249_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19330;old_locus_tag=VYA_36570 NZ_AP024166.1 Protein Homology CDS 1074108 1074569 . - 0 ID=cds-WP_128813183.1;Parent=gene-VA249_RS19330;Dbxref=Genbank:WP_128813183.1;Name=WP_128813183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017105619.1;locus_tag=VA249_RS19330;product=TetR/AcrR family transcriptional regulator;protein_id=WP_128813183.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1075097 1075396 . + . ID=gene-VA249_RS19335;Name=VA249_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19335;old_locus_tag=VYA_36580 NZ_AP024166.1 Protein Homology CDS 1075097 1075396 . + 0 ID=cds-WP_128813184.1;Parent=gene-VA249_RS19335;Dbxref=Genbank:WP_128813184.1;Name=WP_128813184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737752.1;locus_tag=VA249_RS19335;product=YfcZ/YiiS family protein;protein_id=WP_128813184.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1075469 1075744 . - . ID=gene-VA249_RS19340;Name=VA249_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19340;old_locus_tag=VYA_36590 NZ_AP024166.1 Protein Homology CDS 1075469 1075744 . - 0 ID=cds-WP_221070440.1;Parent=gene-VA249_RS19340;Dbxref=Genbank:WP_221070440.1;Name=WP_221070440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453446.1;locus_tag=VA249_RS19340;product=DUF1496 domain-containing protein;protein_id=WP_221070440.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1075976 1076524 . + . ID=gene-VA249_RS19345;Name=VA249_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19345;old_locus_tag=VYA_36600 NZ_AP024166.1 Protein Homology CDS 1075976 1076524 . + 0 ID=cds-WP_221070441.1;Parent=gene-VA249_RS19345;Dbxref=Genbank:WP_221070441.1;Name=WP_221070441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529780.1;locus_tag=VA249_RS19345;product=hypothetical protein;protein_id=WP_221070441.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1076789 1077898 . - . ID=gene-VA249_RS19350;Name=VA249_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19350;old_locus_tag=VYA_36610 NZ_AP024166.1 Protein Homology CDS 1076789 1077898 . - 0 ID=cds-WP_221070442.1;Parent=gene-VA249_RS19350;Dbxref=Genbank:WP_221070442.1;Name=WP_221070442.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234738.1;locus_tag=VA249_RS19350;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_221070442.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1078087 1078695 . + . ID=gene-VA249_RS19355;Name=VA249_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19355;old_locus_tag=VYA_36630 NZ_AP024166.1 Protein Homology CDS 1078087 1078695 . + 0 ID=cds-WP_221070443.1;Parent=gene-VA249_RS19355;Dbxref=Genbank:WP_221070443.1;Name=WP_221070443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697130.1;locus_tag=VA249_RS19355;product=AraC family transcriptional regulator;protein_id=WP_221070443.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1078821 1079465 . - . ID=gene-VA249_RS19360;Name=VA249_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19360;old_locus_tag=VYA_36640 NZ_AP024166.1 Protein Homology CDS 1078821 1079465 . - 0 ID=cds-WP_221070444.1;Parent=gene-VA249_RS19360;Dbxref=Genbank:WP_221070444.1;Name=WP_221070444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306143.1;locus_tag=VA249_RS19360;product=GntR family transcriptional regulator;protein_id=WP_221070444.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1079810 1080292 . - . ID=gene-VA249_RS19365;Name=VA249_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19365;old_locus_tag=VYA_36650 NZ_AP024166.1 Protein Homology CDS 1079810 1080292 . - 0 ID=cds-WP_128813191.1;Parent=gene-VA249_RS19365;Dbxref=Genbank:WP_128813191.1;Name=WP_128813191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999471.1;locus_tag=VA249_RS19365;product=hypothetical protein;protein_id=WP_128813191.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1080322 1080855 . - . ID=gene-VA249_RS19370;Name=VA249_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19370;old_locus_tag=VYA_36660 NZ_AP024166.1 Protein Homology CDS 1080322 1080855 . - 0 ID=cds-WP_211916666.1;Parent=gene-VA249_RS19370;Dbxref=Genbank:WP_211916666.1;Name=WP_211916666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006742204.1;locus_tag=VA249_RS19370;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=WP_211916666.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1081066 1081896 . + . ID=gene-VA249_RS19375;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=VA249_RS19375;old_locus_tag=VYA_36670 NZ_AP024166.1 Protein Homology CDS 1081066 1081896 . + 0 ID=cds-WP_221070446.1;Parent=gene-VA249_RS19375;Dbxref=Genbank:WP_221070446.1;Name=WP_221070446.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600251.1;locus_tag=VA249_RS19375;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_221070446.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1082021 1083838 . - . ID=gene-VA249_RS19380;Name=VA249_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19380;old_locus_tag=VYA_36680 NZ_AP024166.1 Protein Homology CDS 1082021 1083838 . - 0 ID=cds-WP_221070448.1;Parent=gene-VA249_RS19380;Dbxref=Genbank:WP_221070448.1;Name=WP_221070448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188687.1;locus_tag=VA249_RS19380;product=hybrid-cluster NAD(P)-dependent oxidoreductase;protein_id=WP_221070448.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1084125 1084289 . + . ID=gene-VA249_RS19385;Name=VA249_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19385;old_locus_tag=VYA_36690 NZ_AP024166.1 Protein Homology CDS 1084125 1084289 . + 0 ID=cds-WP_005453437.1;Parent=gene-VA249_RS19385;Dbxref=Genbank:WP_005453437.1;Name=WP_005453437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234744.1;locus_tag=VA249_RS19385;product=YqaE/Pmp3 family membrane protein;protein_id=WP_005453437.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1084445 1085473 . + . ID=gene-VA249_RS19390;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=VA249_RS19390;old_locus_tag=VYA_36700 NZ_AP024166.1 Protein Homology CDS 1084445 1085473 . + 0 ID=cds-WP_221070450.1;Parent=gene-VA249_RS19390;Dbxref=Genbank:WP_221070450.1;Name=WP_221070450.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005480191.1;locus_tag=VA249_RS19390;product=dihydroorotase;protein_id=WP_221070450.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1085567 1086475 . - . ID=gene-VA249_RS19395;Name=VA249_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19395;old_locus_tag=VYA_36710 NZ_AP024166.1 Protein Homology CDS 1085567 1086475 . - 0 ID=cds-WP_211916659.1;Parent=gene-VA249_RS19395;Dbxref=Genbank:WP_211916659.1;Name=WP_211916659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453434.1;locus_tag=VA249_RS19395;product=DUF808 domain-containing protein;protein_id=WP_211916659.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1086650 1087570 . + . ID=gene-VA249_RS19400;Name=VA249_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19400;old_locus_tag=VYA_36720 NZ_AP024166.1 Protein Homology CDS 1086650 1087570 . + 0 ID=cds-WP_221070452.1;Parent=gene-VA249_RS19400;Dbxref=Genbank:WP_221070452.1;Name=WP_221070452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704855.1;locus_tag=VA249_RS19400;product=M14 family metallocarboxypeptidase;protein_id=WP_221070452.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1087731 1088807 . - . ID=gene-VA249_RS19405;Name=VA249_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19405;old_locus_tag=VYA_36730 NZ_AP024166.1 Protein Homology CDS 1087731 1088807 . - 0 ID=cds-WP_221070455.1;Parent=gene-VA249_RS19405;Dbxref=Genbank:WP_221070455.1;Name=WP_221070455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017064057.1;locus_tag=VA249_RS19405;product=endonuclease domain-containing protein;protein_id=WP_221070455.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1088917 1091727 . - . ID=gene-VA249_RS19410;Name=VA249_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19410;old_locus_tag=VYA_36740 NZ_AP024166.1 Protein Homology CDS 1088917 1091727 . - 0 ID=cds-WP_221070457.1;Parent=gene-VA249_RS19410;Dbxref=Genbank:WP_221070457.1;Name=WP_221070457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447736.1;locus_tag=VA249_RS19410;product=ATPase;protein_id=WP_221070457.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 1092086 1092201 . + . ID=gene-VA249_RS19415;Name=VA249_RS19415;end_range=1092201,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS19415;partial=true;pseudo=true;start_range=.,1092086 NZ_AP024166.1 Protein Homology CDS 1092086 1092201 . + 0 ID=cds-VA249_RS19415;Parent=gene-VA249_RS19415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1092201,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011845808.1;locus_tag=VA249_RS19415;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,1092086;transl_table=11 NZ_AP024166.1 RefSeq gene 1092305 1092922 . + . ID=gene-VA249_RS19420;Name=VA249_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19420;old_locus_tag=VYA_36750 NZ_AP024166.1 GeneMarkS-2+ CDS 1092305 1092922 . + 0 ID=cds-WP_221070459.1;Parent=gene-VA249_RS19420;Dbxref=Genbank:WP_221070459.1;Name=WP_221070459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19420;product=hypothetical protein;protein_id=WP_221070459.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1092925 1093269 . + . ID=gene-VA249_RS19425;Name=VA249_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19425;old_locus_tag=VYA_36760 NZ_AP024166.1 GeneMarkS-2+ CDS 1092925 1093269 . + 0 ID=cds-WP_221070460.1;Parent=gene-VA249_RS19425;Dbxref=Genbank:WP_221070460.1;Name=WP_221070460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19425;product=hypothetical protein;protein_id=WP_221070460.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1093507 1094142 . + . ID=gene-VA249_RS19430;Name=VA249_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19430;old_locus_tag=VYA_36770 NZ_AP024166.1 GeneMarkS-2+ CDS 1093507 1094142 . + 0 ID=cds-WP_221070462.1;Parent=gene-VA249_RS19430;Dbxref=Genbank:WP_221070462.1;Name=WP_221070462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19430;product=hypothetical protein;protein_id=WP_221070462.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1094213 1094986 . - . ID=gene-VA249_RS19435;Name=VA249_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19435;old_locus_tag=VYA_36780 NZ_AP024166.1 Protein Homology CDS 1094213 1094986 . - 0 ID=cds-WP_221070464.1;Parent=gene-VA249_RS19435;Dbxref=Genbank:WP_221070464.1;Name=WP_221070464.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012669.2;locus_tag=VA249_RS19435;product=DeoR family transcriptional regulator;protein_id=WP_221070464.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1095023 1095682 . - . ID=gene-VA249_RS19440;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=VA249_RS19440;old_locus_tag=VYA_36790 NZ_AP024166.1 Protein Homology CDS 1095023 1095682 . - 0 ID=cds-WP_225927134.1;Parent=gene-VA249_RS19440;Dbxref=Genbank:WP_225927134.1;Name=WP_225927134.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667286.1;locus_tag=VA249_RS19440;product=deoxyribose-phosphate aldolase;protein_id=WP_225927134.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1095897 1096826 . + . ID=gene-VA249_RS19445;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=VA249_RS19445;old_locus_tag=VYA_36800 NZ_AP024166.1 Protein Homology CDS 1095897 1096826 . + 0 ID=cds-WP_221070466.1;Parent=gene-VA249_RS19445;Dbxref=Genbank:WP_221070466.1;Name=WP_221070466.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397555.1;locus_tag=VA249_RS19445;product=ribokinase;protein_id=WP_221070466.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1096859 1098181 . + . ID=gene-VA249_RS19450;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=VA249_RS19450;old_locus_tag=VYA_36810 NZ_AP024166.1 Protein Homology CDS 1096859 1098181 . + 0 ID=cds-WP_221070468.1;Parent=gene-VA249_RS19450;Dbxref=Genbank:WP_221070468.1;Name=WP_221070468.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005398569.1;locus_tag=VA249_RS19450;product=L-fucose:H+ symporter permease;protein_id=WP_221070468.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1098226 1099239 . + . ID=gene-VA249_RS19455;Name=VA249_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19455;old_locus_tag=VYA_36820 NZ_AP024166.1 Protein Homology CDS 1098226 1099239 . + 0 ID=cds-WP_221070470.1;Parent=gene-VA249_RS19455;Dbxref=Genbank:WP_221070470.1;Name=WP_221070470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011149443.1;locus_tag=VA249_RS19455;product=aldose 1-epimerase family protein;protein_id=WP_221070470.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1099309 1100097 . - . ID=gene-VA249_RS19460;Name=VA249_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19460;old_locus_tag=VYA_36830 NZ_AP024166.1 Protein Homology CDS 1099309 1100097 . - 0 ID=cds-WP_211916651.1;Parent=gene-VA249_RS19460;Dbxref=Genbank:WP_211916651.1;Name=WP_211916651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017104902.1;locus_tag=VA249_RS19460;product=helix-turn-helix transcriptional regulator;protein_id=WP_211916651.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1100196 1101101 . + . ID=gene-VA249_RS19465;Name=VA249_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19465;old_locus_tag=VYA_36840 NZ_AP024166.1 Protein Homology CDS 1100196 1101101 . + 0 ID=cds-WP_221070472.1;Parent=gene-VA249_RS19465;Dbxref=Genbank:WP_221070472.1;Name=WP_221070472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194056.1;locus_tag=VA249_RS19465;product=DMT family transporter;protein_id=WP_221070472.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1101239 1101733 . + . ID=gene-VA249_RS19470;Name=VA249_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19470;old_locus_tag=VYA_36850 NZ_AP024166.1 Protein Homology CDS 1101239 1101733 . + 0 ID=cds-WP_128813210.1;Parent=gene-VA249_RS19470;Dbxref=Genbank:WP_128813210.1;Name=WP_128813210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004727669.1;locus_tag=VA249_RS19470;product=acyl-CoA thioesterase;protein_id=WP_128813210.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1101938 1102183 . + . ID=gene-VA249_RS19475;Name=VA249_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19475;old_locus_tag=VYA_36860 NZ_AP024166.1 Protein Homology CDS 1101938 1102183 . + 0 ID=cds-WP_128813211.1;Parent=gene-VA249_RS19475;Dbxref=Genbank:WP_128813211.1;Name=WP_128813211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005375277.1;locus_tag=VA249_RS19475;product=hypothetical protein;protein_id=WP_128813211.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1102565 1103455 . - . ID=gene-VA249_RS19480;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=VA249_RS19480;old_locus_tag=VYA_36870 NZ_AP024166.1 Protein Homology CDS 1102565 1103455 . - 0 ID=cds-WP_221070474.1;Parent=gene-VA249_RS19480;Dbxref=Genbank:WP_221070474.1;Name=WP_221070474.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252025.1;locus_tag=VA249_RS19480;product=maltose ABC transporter permease MalG;protein_id=WP_221070474.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1103468 1105045 . - . ID=gene-VA249_RS19485;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=VA249_RS19485;old_locus_tag=VYA_36880 NZ_AP024166.1 Protein Homology CDS 1103468 1105045 . - 0 ID=cds-WP_211916643.1;Parent=gene-VA249_RS19485;Dbxref=Genbank:WP_211916643.1;Name=WP_211916643.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082432.1;locus_tag=VA249_RS19485;product=maltose ABC transporter permease MalF;protein_id=WP_211916643.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1105124 1106302 . - . ID=gene-VA249_RS19490;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=VA249_RS19490;old_locus_tag=VYA_36890 NZ_AP024166.1 Protein Homology CDS 1105124 1106302 . - 0 ID=cds-WP_128813214.1;Parent=gene-VA249_RS19490;Dbxref=Genbank:WP_128813214.1;Name=WP_128813214.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786217.1;locus_tag=VA249_RS19490;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_128813214.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1106616 1106762 . + . ID=gene-VA249_RS19495;Name=VA249_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19495 NZ_AP024166.1 GeneMarkS-2+ CDS 1106616 1106762 . + 0 ID=cds-WP_164837309.1;Parent=gene-VA249_RS19495;Dbxref=Genbank:WP_164837309.1;Name=WP_164837309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19495;product=hypothetical protein;protein_id=WP_164837309.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1106968 1108083 . + . ID=gene-VA249_RS19500;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=VA249_RS19500;old_locus_tag=VYA_36900 NZ_AP024166.1 Protein Homology CDS 1106968 1108083 . + 0 ID=cds-WP_128813215.1;Parent=gene-VA249_RS19500;Dbxref=Genbank:WP_128813215.1;Name=WP_128813215.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082430.1;locus_tag=VA249_RS19500;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_128813215.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1108235 1108555 . + . ID=gene-VA249_RS19505;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=VA249_RS19505;old_locus_tag=VYA_36910 NZ_AP024166.1 Protein Homology CDS 1108235 1108555 . + 0 ID=cds-WP_128813216.1;Parent=gene-VA249_RS19505;Dbxref=Genbank:WP_128813216.1;Name=WP_128813216.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392475.1;locus_tag=VA249_RS19505;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_128813216.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1108605 1109240 . + . ID=gene-VA249_RS19510;Name=VA249_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19510;old_locus_tag=VYA_36920 NZ_AP024166.1 Protein Homology CDS 1108605 1109240 . + 0 ID=cds-WP_221070476.1;Parent=gene-VA249_RS19510;Dbxref=Genbank:WP_221070476.1;Name=WP_221070476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645060.1;locus_tag=VA249_RS19510;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221070476.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1109342 1110373 . + . ID=gene-VA249_RS19515;Name=VA249_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19515;old_locus_tag=VYA_36930 NZ_AP024166.1 Protein Homology CDS 1109342 1110373 . + 0 ID=cds-WP_221070478.1;Parent=gene-VA249_RS19515;Dbxref=Genbank:WP_221070478.1;Name=WP_221070478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451381.1;locus_tag=VA249_RS19515;product=NADP-dependent oxidoreductase;protein_id=WP_221070478.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1110390 1111007 . + . ID=gene-VA249_RS19520;Name=VA249_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19520;old_locus_tag=VYA_36940 NZ_AP024166.1 Protein Homology CDS 1110390 1111007 . + 0 ID=cds-WP_128813219.1;Parent=gene-VA249_RS19520;Dbxref=Genbank:WP_128813219.1;Name=WP_128813219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005432051.1;locus_tag=VA249_RS19520;product=glutathione S-transferase family protein;protein_id=WP_128813219.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1111294 1112730 . + . ID=gene-VA249_RS19525;Name=VA249_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19525;old_locus_tag=VYA_36950 NZ_AP024166.1 Protein Homology CDS 1111294 1112730 . + 0 ID=cds-WP_221070479.1;Parent=gene-VA249_RS19525;Dbxref=Genbank:WP_221070479.1;Name=WP_221070479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645064.1;locus_tag=VA249_RS19525;product=catalase;protein_id=WP_221070479.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1112921 1113799 . - . ID=gene-VA249_RS19530;Name=VA249_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19530;old_locus_tag=VYA_36960 NZ_AP024166.1 Protein Homology CDS 1112921 1113799 . - 0 ID=cds-WP_221070480.1;Parent=gene-VA249_RS19530;Dbxref=Genbank:WP_221070480.1;Name=WP_221070480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819353.1;locus_tag=VA249_RS19530;product=NAD(P)-dependent oxidoreductase;protein_id=WP_221070480.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1113898 1114269 . - . ID=gene-VA249_RS19535;Name=VA249_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19535;old_locus_tag=VYA_36970 NZ_AP024166.1 Protein Homology CDS 1113898 1114269 . - 0 ID=cds-WP_221070481.1;Parent=gene-VA249_RS19535;Dbxref=Genbank:WP_221070481.1;Name=WP_221070481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452747.1;locus_tag=VA249_RS19535;product=DoxX family protein;protein_id=WP_221070481.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1114370 1115257 . + . ID=gene-VA249_RS19540;Name=VA249_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19540;old_locus_tag=VYA_36980 NZ_AP024166.1 Protein Homology CDS 1114370 1115257 . + 0 ID=cds-WP_221070482.1;Parent=gene-VA249_RS19540;Dbxref=Genbank:WP_221070482.1;Name=WP_221070482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008077014.1;locus_tag=VA249_RS19540;product=LysR family transcriptional regulator;protein_id=WP_221070482.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1115326 1117197 . - . ID=gene-VA249_RS19545;Name=VA249_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19545;old_locus_tag=VYA_36990 NZ_AP024166.1 Protein Homology CDS 1115326 1117197 . - 0 ID=cds-WP_221070483.1;Parent=gene-VA249_RS19545;Dbxref=Genbank:WP_221070483.1;Name=WP_221070483.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020432878.1;locus_tag=VA249_RS19545;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_221070483.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1117398 1117697 . + . ID=gene-VA249_RS19550;Name=VA249_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19550;old_locus_tag=VYA_37000 NZ_AP024166.1 Protein Homology CDS 1117398 1117697 . + 0 ID=cds-WP_128813225.1;Parent=gene-VA249_RS19550;Dbxref=Genbank:WP_128813225.1;Name=WP_128813225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706150.1;locus_tag=VA249_RS19550;product=PTS fructose transporter subunit IIB;protein_id=WP_128813225.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1117707 1118483 . + . ID=gene-VA249_RS19555;Name=VA249_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19555;old_locus_tag=VYA_37010 NZ_AP024166.1 Protein Homology CDS 1117707 1118483 . + 0 ID=cds-WP_221070484.1;Parent=gene-VA249_RS19555;Dbxref=Genbank:WP_221070484.1;Name=WP_221070484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529684.1;locus_tag=VA249_RS19555;product=PTS sugar transporter subunit IIA;protein_id=WP_221070484.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1118503 1119345 . - . ID=gene-VA249_RS19560;Name=VA249_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19560;old_locus_tag=VYA_37020 NZ_AP024166.1 Protein Homology CDS 1118503 1119345 . - 0 ID=cds-WP_221070485.1;Parent=gene-VA249_RS19560;Dbxref=Genbank:WP_221070485.1;Name=WP_221070485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451367.1;locus_tag=VA249_RS19560;product=AraC family transcriptional regulator;protein_id=WP_221070485.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1119728 1121635 . + . ID=gene-VA249_RS19565;Name=VA249_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19565;old_locus_tag=VYA_37030 NZ_AP024166.1 Protein Homology CDS 1119728 1121635 . + 0 ID=cds-WP_221070486.1;Parent=gene-VA249_RS19565;Dbxref=Genbank:WP_221070486.1;Name=WP_221070486.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074505.1;locus_tag=VA249_RS19565;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_221070486.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1121706 1122938 . + . ID=gene-VA249_RS19570;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=VA249_RS19570;old_locus_tag=VYA_37040 NZ_AP024166.1 Protein Homology CDS 1121706 1122938 . + 0 ID=cds-WP_221070488.1;Parent=gene-VA249_RS19570;Dbxref=Genbank:WP_221070488.1;Name=WP_221070488.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005478337.1;locus_tag=VA249_RS19570;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_221070488.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1123037 1124452 . - . ID=gene-VA249_RS19575;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=VA249_RS19575;old_locus_tag=VYA_37050 NZ_AP024166.1 Protein Homology CDS 1123037 1124452 . - 0 ID=cds-WP_221070490.1;Parent=gene-VA249_RS19575;Dbxref=Genbank:WP_221070490.1;Name=WP_221070490.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016021;gbkey=CDS;gene=melB;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019824495.1;locus_tag=VA249_RS19575;product=melibiose:sodium transporter MelB;protein_id=WP_221070490.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1124562 1125920 . - . ID=gene-VA249_RS19580;Name=VA249_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19580;old_locus_tag=VYA_37060 NZ_AP024166.1 Protein Homology CDS 1124562 1125920 . - 0 ID=cds-WP_221070492.1;Parent=gene-VA249_RS19580;Dbxref=Genbank:WP_221070492.1;Name=WP_221070492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006228956.1;locus_tag=VA249_RS19580;product=alpha-glucosidase/alpha-galactosidase;protein_id=WP_221070492.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1126215 1127216 . + . ID=gene-VA249_RS19585;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=VA249_RS19585;old_locus_tag=VYA_37070 NZ_AP024166.1 Protein Homology CDS 1126215 1127216 . + 0 ID=cds-WP_221070494.1;Parent=gene-VA249_RS19585;Dbxref=Genbank:WP_221070494.1;Name=WP_221070494.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005433059.1;locus_tag=VA249_RS19585;product=transcriptional regulator MelR;protein_id=WP_221070494.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1127241 1127759 . - . ID=gene-VA249_RS19590;Name=VA249_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19590;old_locus_tag=VYA_37080 NZ_AP024166.1 Protein Homology CDS 1127241 1127759 . - 0 ID=cds-WP_221070495.1;Parent=gene-VA249_RS19590;Dbxref=Genbank:WP_221070495.1;Name=WP_221070495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020430946.1;locus_tag=VA249_RS19590;product=RNA methyltransferase;protein_id=WP_221070495.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1127922 1128653 . - . ID=gene-VA249_RS19595;Name=VA249_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19595;old_locus_tag=VYA_37090 NZ_AP024166.1 Protein Homology CDS 1127922 1128653 . - 0 ID=cds-WP_221070498.1;Parent=gene-VA249_RS19595;Dbxref=Genbank:WP_221070498.1;Name=WP_221070498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704142.1;locus_tag=VA249_RS19595;product=nucleoside phosphorylase;protein_id=WP_221070498.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1128885 1129565 . + . ID=gene-VA249_RS19600;Name=VA249_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19600;old_locus_tag=VYA_37100 NZ_AP024166.1 Protein Homology CDS 1128885 1129565 . + 0 ID=cds-WP_221070500.1;Parent=gene-VA249_RS19600;Dbxref=Genbank:WP_221070500.1;Name=WP_221070500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734820.1;locus_tag=VA249_RS19600;product=Crp/Fnr family transcriptional regulator;protein_id=WP_221070500.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1129687 1130898 . - . ID=gene-VA249_RS19605;Name=VA249_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19605;old_locus_tag=VYA_37110 NZ_AP024166.1 Protein Homology CDS 1129687 1130898 . - 0 ID=cds-WP_211918805.1;Parent=gene-VA249_RS19605;Dbxref=Genbank:WP_211918805.1;Name=WP_211918805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017419805.1;locus_tag=VA249_RS19605;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_211918805.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1130898 1131440 . - . ID=gene-VA249_RS19610;Name=VA249_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19610;old_locus_tag=VYA_37120 NZ_AP024166.1 Protein Homology CDS 1130898 1131440 . - 0 ID=cds-WP_211916612.1;Parent=gene-VA249_RS19610;Dbxref=Genbank:WP_211916612.1;Name=WP_211916612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006713654.1;locus_tag=VA249_RS19610;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_211916612.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1132099 1133517 . + . ID=gene-VA249_RS19615;Name=VA249_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19615;old_locus_tag=VYA_37130 NZ_AP024166.1 Protein Homology CDS 1132099 1133517 . + 0 ID=cds-WP_225923944.1;Parent=gene-VA249_RS19615;Dbxref=Genbank:WP_225923944.1;Name=WP_225923944.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386664.1;locus_tag=VA249_RS19615;product=purine/pyrimidine permease;protein_id=WP_225923944.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1133514 1134881 . + . ID=gene-VA249_RS19620;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=VA249_RS19620;old_locus_tag=VYA_37140 NZ_AP024166.1 Protein Homology CDS 1133514 1134881 . + 0 ID=cds-WP_221070509.1;Parent=gene-VA249_RS19620;Dbxref=Genbank:WP_221070509.1;Name=WP_221070509.1;Ontology_term=GO:0006147,GO:0008892;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009386663.1;locus_tag=VA249_RS19620;product=guanine deaminase;protein_id=WP_221070509.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1135264 1135635 . - . ID=gene-VA249_RS19625;Name=VA249_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19625;old_locus_tag=VYA_37150 NZ_AP024166.1 Protein Homology CDS 1135264 1135635 . - 0 ID=cds-WP_221070511.1;Parent=gene-VA249_RS19625;Dbxref=Genbank:WP_221070511.1;Name=WP_221070511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447877.1;locus_tag=VA249_RS19625;product=hypothetical protein;protein_id=WP_221070511.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1135857 1137701 . - . ID=gene-VA249_RS19630;Name=VA249_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19630;old_locus_tag=VYA_37160 NZ_AP024166.1 Protein Homology CDS 1135857 1137701 . - 0 ID=cds-WP_221070513.1;Parent=gene-VA249_RS19630;Dbxref=Genbank:WP_221070513.1;Name=WP_221070513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004411348.1;locus_tag=VA249_RS19630;product=amidohydrolase;protein_id=WP_221070513.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1137988 1142226 . - . ID=gene-VA249_RS19635;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=VA249_RS19635;old_locus_tag=VYA_37170 NZ_AP024166.1 Protein Homology CDS 1137988 1142226 . - 0 ID=cds-WP_221070515.1;Parent=gene-VA249_RS19635;Dbxref=Genbank:WP_221070515.1;Name=WP_221070515.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234678.1;locus_tag=VA249_RS19635;product=formate dehydrogenase subunit alpha;protein_id=WP_221070515.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1142538 1142945 . + . ID=gene-VA249_RS19640;Name=VA249_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19640 NZ_AP024166.1 Protein Homology CDS 1142538 1142945 . + 0 ID=cds-WP_221070518.1;Parent=gene-VA249_RS19640;Dbxref=Genbank:WP_221070518.1;Name=WP_221070518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005385128.1;locus_tag=VA249_RS19640;product=hypothetical protein;protein_id=WP_221070518.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1143081 1144487 . + . ID=gene-VA249_RS19645;Name=VA249_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19645;old_locus_tag=VYA_37180 NZ_AP024166.1 Protein Homology CDS 1143081 1144487 . + 0 ID=cds-WP_221070520.1;Parent=gene-VA249_RS19645;Dbxref=Genbank:WP_221070520.1;Name=WP_221070520.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129820.1;locus_tag=VA249_RS19645;product=TolC family protein;protein_id=WP_221070520.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1144590 1146320 . + . ID=gene-VA249_RS19650;Name=VA249_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19650;old_locus_tag=VYA_37190 NZ_AP024166.1 Protein Homology CDS 1144590 1146320 . + 0 ID=cds-WP_221070521.1;Parent=gene-VA249_RS19650;Dbxref=Genbank:WP_221070521.1;Name=WP_221070521.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435438.1;locus_tag=VA249_RS19650;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221070521.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1146323 1149502 . + . ID=gene-VA249_RS19655;Name=VA249_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19655;old_locus_tag=VYA_37200 NZ_AP024166.1 Protein Homology CDS 1146323 1149502 . + 0 ID=cds-WP_221070522.1;Parent=gene-VA249_RS19655;Dbxref=Genbank:WP_221070522.1;Name=WP_221070522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005385121.1;locus_tag=VA249_RS19655;product=efflux RND transporter permease subunit;protein_id=WP_221070522.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1149580 1150128 . + . ID=gene-VA249_RS19660;Name=VA249_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19660;old_locus_tag=VYA_37210 NZ_AP024166.1 Protein Homology CDS 1149580 1150128 . + 0 ID=cds-WP_221072251.1;Parent=gene-VA249_RS19660;Dbxref=Genbank:WP_221072251.1;Name=WP_221072251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425081.1;locus_tag=VA249_RS19660;product=copper-binding protein;protein_id=WP_221072251.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1150195 1151526 . - . ID=gene-VA249_RS19665;Name=VA249_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19665;old_locus_tag=VYA_37220 NZ_AP024166.1 Protein Homology CDS 1150195 1151526 . - 0 ID=cds-WP_221070523.1;Parent=gene-VA249_RS19665;Dbxref=Genbank:WP_221070523.1;Name=WP_221070523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016799170.1;locus_tag=VA249_RS19665;product=ferric reductase-like transmembrane domain-containing protein;protein_id=WP_221070523.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1151738 1152589 . + . ID=gene-VA249_RS19670;Name=blaCARB;gbkey=Gene;gene=blaCARB;gene_biotype=protein_coding;locus_tag=VA249_RS19670;old_locus_tag=VYA_37230 NZ_AP024166.1 Protein Homology CDS 1151738 1152589 . + 0 ID=cds-WP_221070524.1;Parent=gene-VA249_RS19670;Dbxref=Genbank:WP_221070524.1;Name=WP_221070524.1;gbkey=CDS;gene=blaCARB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706224.1;locus_tag=VA249_RS19670;product=CARB/PSE/RTG family carbenicillin-hydrolyzing class A beta-lactamase;protein_id=WP_221070524.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1152719 1153234 . + . ID=gene-VA249_RS19675;Name=VA249_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19675;old_locus_tag=VYA_37240 NZ_AP024166.1 Protein Homology CDS 1152719 1153234 . + 0 ID=cds-WP_221070525.1;Parent=gene-VA249_RS19675;Dbxref=Genbank:WP_221070525.1;Name=WP_221070525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435424.1;locus_tag=VA249_RS19675;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221070525.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1153234 1154286 . + . ID=gene-VA249_RS19680;Name=VA249_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19680;old_locus_tag=VYA_37250 NZ_AP024166.1 Protein Homology CDS 1153234 1154286 . + 0 ID=cds-WP_221072253.1;Parent=gene-VA249_RS19680;Dbxref=Genbank:WP_221072253.1;Name=WP_221072253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706225.1;locus_tag=VA249_RS19680;product=alcohol dehydrogenase family protein;protein_id=WP_221072253.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1154409 1154981 . - . ID=gene-VA249_RS19685;Name=VA249_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19685;old_locus_tag=VYA_37260 NZ_AP024166.1 Protein Homology CDS 1154409 1154981 . - 0 ID=cds-WP_221070526.1;Parent=gene-VA249_RS19685;Dbxref=Genbank:WP_221070526.1;Name=WP_221070526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452581.1;locus_tag=VA249_RS19685;product=N-acetyltransferase;protein_id=WP_221070526.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1154989 1156152 . - . ID=gene-VA249_RS19690;Name=VA249_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19690;old_locus_tag=VYA_37270 NZ_AP024166.1 Protein Homology CDS 1154989 1156152 . - 0 ID=cds-WP_221070527.1;Parent=gene-VA249_RS19690;Dbxref=Genbank:WP_221070527.1;Name=WP_221070527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706227.1;locus_tag=VA249_RS19690;product=MerR family transcriptional regulator;protein_id=WP_221070527.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1156299 1156697 . - . ID=gene-VA249_RS19695;Name=VA249_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19695;old_locus_tag=VYA_37280 NZ_AP024166.1 Protein Homology CDS 1156299 1156697 . - 0 ID=cds-WP_221070530.1;Parent=gene-VA249_RS19695;Dbxref=Genbank:WP_221070530.1;Name=WP_221070530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426369.1;locus_tag=VA249_RS19695;product=NUDIX domain-containing protein;protein_id=WP_221070530.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1156718 1157218 . - . ID=gene-VA249_RS19700;Name=VA249_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19700;old_locus_tag=VYA_37290 NZ_AP024166.1 Protein Homology CDS 1156718 1157218 . - 0 ID=cds-WP_221070531.1;Parent=gene-VA249_RS19700;Dbxref=Genbank:WP_221070531.1;Name=WP_221070531.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452596.1;locus_tag=VA249_RS19700;product=GNAT family N-acetyltransferase;protein_id=WP_221070531.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1157486 1159642 . - . ID=gene-VA249_RS19705;Name=VA249_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19705;old_locus_tag=VYA_37300 NZ_AP024166.1 Protein Homology CDS 1157486 1159642 . - 0 ID=cds-WP_221070533.1;Parent=gene-VA249_RS19705;Dbxref=Genbank:WP_221070533.1;Name=WP_221070533.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426346.1;locus_tag=VA249_RS19705;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_221070533.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1159813 1160064 . + . ID=gene-VA249_RS19710;Name=VA249_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19710;old_locus_tag=VYA_37310 NZ_AP024166.1 Protein Homology CDS 1159813 1160064 . + 0 ID=cds-WP_221070536.1;Parent=gene-VA249_RS19710;Dbxref=Genbank:WP_221070536.1;Name=WP_221070536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426417.1;locus_tag=VA249_RS19710;product=DUF6482 family protein;protein_id=WP_221070536.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1160214 1160639 . + . ID=gene-VA249_RS19715;Name=VA249_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19715;old_locus_tag=VYA_37320 NZ_AP024166.1 Protein Homology CDS 1160214 1160639 . + 0 ID=cds-WP_128813250.1;Parent=gene-VA249_RS19715;Dbxref=Genbank:WP_128813250.1;Name=WP_128813250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439056.1;locus_tag=VA249_RS19715;product=universal stress protein;protein_id=WP_128813250.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1161119 1161610 . + . ID=gene-VA249_RS19720;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=VA249_RS19720;old_locus_tag=VYA_37340 NZ_AP024166.1 Protein Homology CDS 1161119 1161610 . + 0 ID=cds-WP_221070538.1;Parent=gene-VA249_RS19720;Dbxref=Genbank:WP_221070538.1;Name=WP_221070538.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000832997.1;locus_tag=VA249_RS19720;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_221070538.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1161856 1162374 . - . ID=gene-VA249_RS19725;Name=VA249_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19725;old_locus_tag=VYA_37350 NZ_AP024166.1 GeneMarkS-2+ CDS 1161856 1162374 . - 0 ID=cds-WP_221070540.1;Parent=gene-VA249_RS19725;Dbxref=Genbank:WP_221070540.1;Name=WP_221070540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19725;product=hypothetical protein;protein_id=WP_221070540.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1162819 1163154 . + . ID=gene-VA249_RS19730;Name=VA249_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19730;old_locus_tag=VYA_37360 NZ_AP024166.1 Protein Homology CDS 1162819 1163154 . + 0 ID=cds-WP_221070542.1;Parent=gene-VA249_RS19730;Dbxref=Genbank:WP_221070542.1;Name=WP_221070542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452650.1;locus_tag=VA249_RS19730;product=hypothetical protein;protein_id=WP_221070542.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1163421 1163549 . + . ID=gene-VA249_RS24230;Name=VA249_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24230 NZ_AP024166.1 Protein Homology CDS 1163421 1163549 . + 0 ID=cds-WP_256997335.1;Parent=gene-VA249_RS24230;Dbxref=Genbank:WP_256997335.1;Name=WP_256997335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426395.1;locus_tag=VA249_RS24230;product=hypothetical protein;protein_id=WP_256997335.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1163803 1164651 . + . ID=gene-VA249_RS19735;Name=VA249_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19735;old_locus_tag=VYA_37370 NZ_AP024166.1 Protein Homology CDS 1163803 1164651 . + 0 ID=cds-WP_221070544.1;Parent=gene-VA249_RS19735;Dbxref=Genbank:WP_221070544.1;Name=WP_221070544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005385563.1;locus_tag=VA249_RS19735;product=patatin family protein;protein_id=WP_221070544.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1164765 1165613 . - . ID=gene-VA249_RS19740;Name=VA249_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19740;old_locus_tag=VYA_37380 NZ_AP024166.1 Protein Homology CDS 1164765 1165613 . - 0 ID=cds-WP_221070546.1;Parent=gene-VA249_RS19740;Dbxref=Genbank:WP_221070546.1;Name=WP_221070546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818552.1;locus_tag=VA249_RS19740;product=pirin family protein;protein_id=WP_221070546.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1165927 1166139 . + . ID=gene-VA249_RS19745;Name=VA249_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19745;old_locus_tag=VYA_37390 NZ_AP024166.1 Protein Homology CDS 1165927 1166139 . + 0 ID=cds-WP_099080410.1;Parent=gene-VA249_RS19745;Dbxref=Genbank:WP_099080410.1;Name=WP_099080410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005426339.1;locus_tag=VA249_RS19745;product=cold-shock protein;protein_id=WP_099080410.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1166623 1166763 . + . ID=gene-VA249_RS19750;Name=VA249_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19750;old_locus_tag=VYA_37410 NZ_AP024166.1 Protein Homology CDS 1166623 1166763 . + 0 ID=cds-WP_128813260.1;Parent=gene-VA249_RS19750;Dbxref=Genbank:WP_128813260.1;Name=WP_128813260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706263.1;locus_tag=VA249_RS19750;product=adenosine deaminase;protein_id=WP_128813260.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1167183 1167656 . + . ID=gene-VA249_RS19755;Name=VA249_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19755;old_locus_tag=VYA_37420 NZ_AP024166.1 Protein Homology CDS 1167183 1167656 . + 0 ID=cds-WP_221070547.1;Parent=gene-VA249_RS19755;Dbxref=Genbank:WP_221070547.1;Name=WP_221070547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129867.1;locus_tag=VA249_RS19755;product=peroxiredoxin;protein_id=WP_221070547.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1167718 1168029 . - . ID=gene-VA249_RS19760;Name=VA249_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19760;old_locus_tag=VYA_37430 NZ_AP024166.1 Protein Homology CDS 1167718 1168029 . - 0 ID=cds-WP_164837330.1;Parent=gene-VA249_RS19760;Dbxref=Genbank:WP_164837330.1;Name=WP_164837330.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005485240.1;locus_tag=VA249_RS19760;product=SPOR domain-containing protein;protein_id=WP_164837330.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1168214 1169383 . - . ID=gene-VA249_RS19765;Name=VA249_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19765;old_locus_tag=VYA_37440 NZ_AP024166.1 Protein Homology CDS 1168214 1169383 . - 0 ID=cds-WP_221070548.1;Parent=gene-VA249_RS19765;Dbxref=Genbank:WP_221070548.1;Name=WP_221070548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015727663.1;locus_tag=VA249_RS19765;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_221070548.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1169963 1171573 . + . ID=gene-VA249_RS19770;Name=VA249_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19770;old_locus_tag=VYA_37460 NZ_AP024166.1 Protein Homology CDS 1169963 1171573 . + 0 ID=cds-WP_221070549.1;Parent=gene-VA249_RS19770;Dbxref=Genbank:WP_221070549.1;Name=WP_221070549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194699.1;locus_tag=VA249_RS19770;product=BCCT family transporter;protein_id=WP_221070549.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1171694 1172656 . - . ID=gene-VA249_RS19775;Name=VA249_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19775;old_locus_tag=VYA_37470 NZ_AP024166.1 Protein Homology CDS 1171694 1172656 . - 0 ID=cds-WP_221070550.1;Parent=gene-VA249_RS19775;Dbxref=Genbank:WP_221070550.1;Name=WP_221070550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006073680.1;locus_tag=VA249_RS19775;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_221070550.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1172788 1173687 . + . ID=gene-VA249_RS19780;Name=VA249_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19780;old_locus_tag=VYA_37480 NZ_AP024166.1 Protein Homology CDS 1172788 1173687 . + 0 ID=cds-WP_221070551.1;Parent=gene-VA249_RS19780;Dbxref=Genbank:WP_221070551.1;Name=WP_221070551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706276.1;locus_tag=VA249_RS19780;product=LysR substrate-binding domain-containing protein;protein_id=WP_221070551.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1173745 1174605 . - . ID=gene-VA249_RS19785;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=VA249_RS19785;old_locus_tag=VYA_37490 NZ_AP024166.1 Protein Homology CDS 1173745 1174605 . - 0 ID=cds-WP_221070552.1;Parent=gene-VA249_RS19785;Dbxref=Genbank:WP_221070552.1;Name=WP_221070552.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531877.1;locus_tag=VA249_RS19785;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_221070552.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1174822 1175388 . - . ID=gene-VA249_RS19790;Name=VA249_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19790;old_locus_tag=VYA_37500 NZ_AP024166.1 Protein Homology CDS 1174822 1175388 . - 0 ID=cds-WP_221070553.1;Parent=gene-VA249_RS19790;Dbxref=Genbank:WP_221070553.1;Name=WP_221070553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818547.1;locus_tag=VA249_RS19790;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221070553.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1175488 1176021 . + . ID=gene-VA249_RS19795;Name=VA249_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19795;old_locus_tag=VYA_37510 NZ_AP024166.1 Protein Homology CDS 1175488 1176021 . + 0 ID=cds-WP_221070555.1;Parent=gene-VA249_RS19795;Dbxref=Genbank:WP_221070555.1;Name=WP_221070555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463357.1;locus_tag=VA249_RS19795;product=dihydrofolate reductase family protein;protein_id=WP_221070555.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1176110 1176661 . - . ID=gene-VA249_RS19800;Name=VA249_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19800;old_locus_tag=VYA_37520 NZ_AP024166.1 Protein Homology CDS 1176110 1176661 . - 0 ID=cds-WP_221070557.1;Parent=gene-VA249_RS19800;Dbxref=Genbank:WP_221070557.1;Name=WP_221070557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008223780.1;locus_tag=VA249_RS19800;product=class IV adenylate cyclase;protein_id=WP_221070557.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1176826 1177545 . - . ID=gene-VA249_RS19805;Name=VA249_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19805;old_locus_tag=VYA_37530 NZ_AP024166.1 Protein Homology CDS 1176826 1177545 . - 0 ID=cds-WP_221070560.1;Parent=gene-VA249_RS19805;Dbxref=Genbank:WP_221070560.1;Name=WP_221070560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452891.1;locus_tag=VA249_RS19805;product=beta-ketoacyl-ACP reductase;protein_id=WP_221070560.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1177906 1178559 . + . ID=gene-VA249_RS19810;Name=VA249_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19810;old_locus_tag=VYA_37540 NZ_AP024166.1 Protein Homology CDS 1177906 1178559 . + 0 ID=cds-WP_221070561.1;Parent=gene-VA249_RS19810;Dbxref=Genbank:WP_221070561.1;Name=WP_221070561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439149.1;locus_tag=VA249_RS19810;product=cupin domain-containing protein;protein_id=WP_221070561.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1178756 1178995 . - . ID=gene-VA249_RS19815;Name=VA249_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19815;old_locus_tag=VYA_37550 NZ_AP024166.1 Protein Homology CDS 1178756 1178995 . - 0 ID=cds-WP_128813270.1;Parent=gene-VA249_RS19815;Dbxref=Genbank:WP_128813270.1;Name=WP_128813270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697034.1;locus_tag=VA249_RS19815;product=YdcH family protein;protein_id=WP_128813270.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1179223 1180026 . + . ID=gene-VA249_RS19820;Name=VA249_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19820;old_locus_tag=VYA_37560 NZ_AP024166.1 Protein Homology CDS 1179223 1180026 . + 0 ID=cds-WP_221070563.1;Parent=gene-VA249_RS19820;Dbxref=Genbank:WP_221070563.1;Name=WP_221070563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452901.1;locus_tag=VA249_RS19820;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_221070563.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1180279 1181151 . + . ID=gene-VA249_RS19825;Name=VA249_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19825;old_locus_tag=VYA_37570 NZ_AP024166.1 Protein Homology CDS 1180279 1181151 . + 0 ID=cds-WP_221070565.1;Parent=gene-VA249_RS19825;Dbxref=Genbank:WP_221070565.1;Name=WP_221070565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194685.1;locus_tag=VA249_RS19825;product=radical SAM protein;protein_id=WP_221070565.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1181218 1182132 . - . ID=gene-VA249_RS19830;Name=VA249_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19830;old_locus_tag=VYA_37580 NZ_AP024166.1 Protein Homology CDS 1181218 1182132 . - 0 ID=cds-WP_221070567.1;Parent=gene-VA249_RS19830;Dbxref=Genbank:WP_221070567.1;Name=WP_221070567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439159.1;locus_tag=VA249_RS19830;product=LysR family transcriptional regulator;protein_id=WP_221070567.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1182224 1183093 . - . ID=gene-VA249_RS19835;Name=VA249_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19835;old_locus_tag=VYA_37590 NZ_AP024166.1 Protein Homology CDS 1182224 1183093 . - 0 ID=cds-WP_221070569.1;Parent=gene-VA249_RS19835;Dbxref=Genbank:WP_221070569.1;Name=WP_221070569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194684.1;locus_tag=VA249_RS19835;product=AraC family transcriptional regulator;protein_id=WP_221070569.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1183225 1184373 . + . ID=gene-VA249_RS19840;Name=VA249_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19840;old_locus_tag=VYA_37600 NZ_AP024166.1 Protein Homology CDS 1183225 1184373 . + 0 ID=cds-WP_221070571.1;Parent=gene-VA249_RS19840;Dbxref=Genbank:WP_221070571.1;Name=WP_221070571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464060.1;locus_tag=VA249_RS19840;product=PLP-dependent aminotransferase family protein;protein_id=WP_221070571.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1184612 1184755 . + . ID=gene-VA249_RS19845;Name=VA249_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19845 NZ_AP024166.1 GeneMarkS-2+ CDS 1184612 1184755 . + 0 ID=cds-WP_221070573.1;Parent=gene-VA249_RS19845;Dbxref=Genbank:WP_221070573.1;Name=WP_221070573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS19845;product=hypothetical protein;protein_id=WP_221070573.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1184801 1185829 . + . ID=gene-VA249_RS19850;Name=VA249_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19850;old_locus_tag=VYA_37610 NZ_AP024166.1 Protein Homology CDS 1184801 1185829 . + 0 ID=cds-WP_221070574.1;Parent=gene-VA249_RS19850;Dbxref=Genbank:WP_221070574.1;Name=WP_221070574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819833.1;locus_tag=VA249_RS19850;product=hypothetical protein;protein_id=WP_221070574.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1185907 1186233 . - . ID=gene-VA249_RS19855;Name=VA249_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19855;old_locus_tag=VYA_37620 NZ_AP024166.1 Protein Homology CDS 1185907 1186233 . - 0 ID=cds-WP_128813277.1;Parent=gene-VA249_RS19855;Dbxref=Genbank:WP_128813277.1;Name=WP_128813277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451338.1;locus_tag=VA249_RS19855;product=DUF4156 domain-containing protein;protein_id=WP_128813277.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1186378 1187082 . + . ID=gene-VA249_RS19860;Name=VA249_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19860;old_locus_tag=VYA_37630 NZ_AP024166.1 Protein Homology CDS 1186378 1187082 . + 0 ID=cds-WP_221070576.1;Parent=gene-VA249_RS19860;Dbxref=Genbank:WP_221070576.1;Name=WP_221070576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009841957.1;locus_tag=VA249_RS19860;product=lipoate--protein ligase;protein_id=WP_221070576.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1187136 1187564 . - . ID=gene-VA249_RS19865;Name=VA249_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19865;old_locus_tag=VYA_37640 NZ_AP024166.1 Protein Homology CDS 1187136 1187564 . - 0 ID=cds-WP_128813279.1;Parent=gene-VA249_RS19865;Dbxref=Genbank:WP_128813279.1;Name=WP_128813279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452909.1;locus_tag=VA249_RS19865;product=VOC family protein;protein_id=WP_128813279.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1187818 1189368 . + . ID=gene-VA249_RS19870;Name=VA249_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19870;old_locus_tag=VYA_37650 NZ_AP024166.1 Protein Homology CDS 1187818 1189368 . + 0 ID=cds-WP_221070578.1;Parent=gene-VA249_RS19870;Dbxref=Genbank:WP_221070578.1;Name=WP_221070578.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392756.1;locus_tag=VA249_RS19870;product=DEAD/DEAH box helicase;protein_id=WP_221070578.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1189678 1190256 . + . ID=gene-VA249_RS19875;Name=VA249_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19875;old_locus_tag=VYA_37660 NZ_AP024166.1 Protein Homology CDS 1189678 1190256 . + 0 ID=cds-WP_221070581.1;Parent=gene-VA249_RS19875;Dbxref=Genbank:WP_221070581.1;Name=WP_221070581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017058485.1;locus_tag=VA249_RS19875;product=DJ-1/PfpI family protein;protein_id=WP_221070581.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1190321 1190701 . + . ID=gene-VA249_RS19880;Name=VA249_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19880;old_locus_tag=VYA_37670 NZ_AP024166.1 Protein Homology CDS 1190321 1190701 . + 0 ID=cds-WP_221070583.1;Parent=gene-VA249_RS19880;Dbxref=Genbank:WP_221070583.1;Name=WP_221070583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194675.1;locus_tag=VA249_RS19880;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_221070583.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1190853 1192316 . - . ID=gene-VA249_RS19885;Name=VA249_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19885;old_locus_tag=VYA_37680 NZ_AP024166.1 Protein Homology CDS 1190853 1192316 . - 0 ID=cds-WP_221070585.1;Parent=gene-VA249_RS19885;Dbxref=Genbank:WP_221070585.1;Name=WP_221070585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019350788.1;locus_tag=VA249_RS19885;product=glutathione synthase;protein_id=WP_221070585.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1192523 1192909 . - . ID=gene-VA249_RS19890;Name=VA249_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19890;old_locus_tag=VYA_37690 NZ_AP024166.1 Protein Homology CDS 1192523 1192909 . - 0 ID=cds-WP_221070587.1;Parent=gene-VA249_RS19890;Dbxref=Genbank:WP_221070587.1;Name=WP_221070587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452953.1;locus_tag=VA249_RS19890;product=universal stress protein;protein_id=WP_221070587.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1193110 1193631 . + . ID=gene-VA249_RS19895;Name=VA249_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19895;old_locus_tag=VYA_37700 NZ_AP024166.1 Protein Homology CDS 1193110 1193631 . + 0 ID=cds-WP_221070589.1;Parent=gene-VA249_RS19895;Dbxref=Genbank:WP_221070589.1;Name=WP_221070589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429640.1;locus_tag=VA249_RS19895;product=DUF2058 family protein;protein_id=WP_221070589.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1193702 1194151 . - . ID=gene-VA249_RS19900;Name=VA249_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19900;old_locus_tag=VYA_37710 NZ_AP024166.1 Protein Homology CDS 1193702 1194151 . - 0 ID=cds-WP_221070591.1;Parent=gene-VA249_RS19900;Dbxref=Genbank:WP_221070591.1;Name=WP_221070591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188644.1;locus_tag=VA249_RS19900;product=YHS domain-containing protein;protein_id=WP_221070591.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1194234 1194626 . - . ID=gene-VA249_RS19905;Name=VA249_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19905;old_locus_tag=VYA_37720 NZ_AP024166.1 Protein Homology CDS 1194234 1194626 . - 0 ID=cds-WP_221070593.1;Parent=gene-VA249_RS19905;Dbxref=Genbank:WP_221070593.1;Name=WP_221070593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005451308.1;locus_tag=VA249_RS19905;product=ribosome recycling factor family protein;protein_id=WP_221070593.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1194630 1195499 . - . ID=gene-VA249_RS19910;Name=VA249_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19910;old_locus_tag=VYA_37730 NZ_AP024166.1 Protein Homology CDS 1194630 1195499 . - 0 ID=cds-WP_221070595.1;Parent=gene-VA249_RS19910;Dbxref=Genbank:WP_221070595.1;Name=WP_221070595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439250.1;locus_tag=VA249_RS19910;product=LysR family transcriptional regulator;protein_id=WP_221070595.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1195607 1196863 . + . ID=gene-VA249_RS19915;Name=VA249_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19915;old_locus_tag=VYA_37740 NZ_AP024166.1 Protein Homology CDS 1195607 1196863 . + 0 ID=cds-WP_171305454.1;Parent=gene-VA249_RS19915;Dbxref=Genbank:WP_171305454.1;Name=WP_171305454.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531852.1;locus_tag=VA249_RS19915;product=adenylosuccinate synthase;protein_id=WP_171305454.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1196999 1197745 . - . ID=gene-VA249_RS19920;Name=VA249_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19920;old_locus_tag=VYA_37750 NZ_AP024166.1 Protein Homology CDS 1196999 1197745 . - 0 ID=cds-WP_221070597.1;Parent=gene-VA249_RS19920;Dbxref=Genbank:WP_221070597.1;Name=WP_221070597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012534745.1;locus_tag=VA249_RS19920;product=phosphatase;protein_id=WP_221070597.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1197772 1198506 . - . ID=gene-VA249_RS19925;Name=VA249_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19925;old_locus_tag=VYA_37760 NZ_AP024166.1 Protein Homology CDS 1197772 1198506 . - 0 ID=cds-WP_221070598.1;Parent=gene-VA249_RS19925;Dbxref=Genbank:WP_221070598.1;Name=WP_221070598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391222.1;locus_tag=VA249_RS19925;product=nucleoside/nucleotide kinase family protein;protein_id=WP_221070598.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1198516 1199034 . - . ID=gene-VA249_RS19930;Name=VA249_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19930;old_locus_tag=VYA_37770 NZ_AP024166.1 Protein Homology CDS 1198516 1199034 . - 0 ID=cds-WP_221070600.1;Parent=gene-VA249_RS19930;Dbxref=Genbank:WP_221070600.1;Name=WP_221070600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818624.1;locus_tag=VA249_RS19930;product=MltR family transcriptional regulator;protein_id=WP_221070600.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1199094 1200365 . - . ID=gene-VA249_RS19935;Name=VA249_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19935;old_locus_tag=VYA_37780 NZ_AP024166.1 Protein Homology CDS 1199094 1200365 . - 0 ID=cds-WP_221070602.1;Parent=gene-VA249_RS19935;Dbxref=Genbank:WP_221070602.1;Name=WP_221070602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391224.1;locus_tag=VA249_RS19935;product=zinc-binding dehydrogenase;protein_id=WP_221070602.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1200413 1201822 . - . ID=gene-VA249_RS19940;Name=VA249_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19940;old_locus_tag=VYA_37790 NZ_AP024166.1 Protein Homology CDS 1200413 1201822 . - 0 ID=cds-WP_221072255.1;Parent=gene-VA249_RS19940;Dbxref=Genbank:WP_221072255.1;Name=WP_221072255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435518.1;locus_tag=VA249_RS19940;product=PTS mannitol transporter subunit IICB;protein_id=WP_221072255.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1201847 1202290 . - . ID=gene-VA249_RS19945;Name=VA249_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19945;old_locus_tag=VYA_37800 NZ_AP024166.1 Protein Homology CDS 1201847 1202290 . - 0 ID=cds-WP_221070604.1;Parent=gene-VA249_RS19945;Dbxref=Genbank:WP_221070604.1;Name=WP_221070604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005425097.1;locus_tag=VA249_RS19945;product=PTS sugar transporter subunit IIA;protein_id=WP_221070604.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1203138 1203557 . + . ID=gene-VA249_RS19950;Name=VA249_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19950;old_locus_tag=VYA_37810 NZ_AP024166.1 Protein Homology CDS 1203138 1203557 . + 0 ID=cds-WP_221070606.1;Parent=gene-VA249_RS19950;Dbxref=Genbank:WP_221070606.1;Name=WP_221070606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005594913.1;locus_tag=VA249_RS19950;product=Hsp20 family protein;protein_id=WP_221070606.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1203872 1205788 . + . ID=gene-VA249_RS19955;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=VA249_RS19955;old_locus_tag=VYA_37820 NZ_AP024166.1 Protein Homology CDS 1203872 1205788 . + 0 ID=cds-WP_221070608.1;Parent=gene-VA249_RS19955;Dbxref=Genbank:WP_221070608.1;Name=WP_221070608.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005533728.1;locus_tag=VA249_RS19955;product=molecular chaperone DnaK;protein_id=WP_221070608.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1205906 1206826 . + . ID=gene-VA249_RS19960;Name=VA249_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19960;old_locus_tag=VYA_37830 NZ_AP024166.1 Protein Homology CDS 1205906 1206826 . + 0 ID=cds-WP_221070610.1;Parent=gene-VA249_RS19960;Dbxref=Genbank:WP_221070610.1;Name=WP_221070610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005594910.1;locus_tag=VA249_RS19960;product=DnaJ domain-containing protein;protein_id=WP_221070610.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1206975 1207808 . - . ID=gene-VA249_RS19965;Name=VA249_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19965;old_locus_tag=VYA_37840 NZ_AP024166.1 Protein Homology CDS 1206975 1207808 . - 0 ID=cds-WP_128813293.1;Parent=gene-VA249_RS19965;Dbxref=Genbank:WP_128813293.1;Name=WP_128813293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522009.1;locus_tag=VA249_RS19965;product=kinase/pyrophosphorylase;protein_id=WP_128813293.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1207989 1210358 . + . ID=gene-VA249_RS19970;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=VA249_RS19970;old_locus_tag=VYA_37850 NZ_AP024166.1 Protein Homology CDS 1207989 1210358 . + 0 ID=cds-WP_221070612.1;Parent=gene-VA249_RS19970;Dbxref=Genbank:WP_221070612.1;Name=WP_221070612.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645890.1;locus_tag=VA249_RS19970;product=phosphoenolpyruvate synthase;protein_id=WP_221070612.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1210570 1211349 . + . ID=gene-VA249_RS19975;Name=VA249_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19975;old_locus_tag=VYA_37860 NZ_AP024166.1 Protein Homology CDS 1210570 1211349 . + 0 ID=cds-WP_221070613.1;Parent=gene-VA249_RS19975;Dbxref=Genbank:WP_221070613.1;Name=WP_221070613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005439266.1;locus_tag=VA249_RS19975;product=hypothetical protein;protein_id=WP_221070613.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1211533 1212378 . - . ID=gene-VA249_RS19980;Name=VA249_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19980;old_locus_tag=VYA_37870 NZ_AP024166.1 Protein Homology CDS 1211533 1212378 . - 0 ID=cds-WP_221070614.1;Parent=gene-VA249_RS19980;Dbxref=Genbank:WP_221070614.1;Name=WP_221070614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017019902.1;locus_tag=VA249_RS19980;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_221070614.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1212380 1212994 . - . ID=gene-VA249_RS19985;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=VA249_RS19985;old_locus_tag=VYA_37880 NZ_AP024166.1 Protein Homology CDS 1212380 1212994 . - 0 ID=cds-WP_128813297.1;Parent=gene-VA249_RS19985;Dbxref=Genbank:WP_128813297.1;Name=WP_128813297.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017085719.1;locus_tag=VA249_RS19985;product=dimethylsulfoxide reductase subunit B;protein_id=WP_128813297.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1213004 1215451 . - . ID=gene-VA249_RS19990;Name=VA249_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19990;old_locus_tag=VYA_37890 NZ_AP024166.1 Protein Homology CDS 1213004 1215451 . - 0 ID=cds-WP_221070617.1;Parent=gene-VA249_RS19990;Dbxref=Genbank:WP_221070617.1;Name=WP_221070617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006230519.1;locus_tag=VA249_RS19990;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_221070617.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1215759 1216343 . + . ID=gene-VA249_RS19995;Name=VA249_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS19995;old_locus_tag=VYA_37900 NZ_AP024166.1 Protein Homology CDS 1215759 1216343 . + 0 ID=cds-WP_221070619.1;Parent=gene-VA249_RS19995;Dbxref=Genbank:WP_221070619.1;Name=WP_221070619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005594689.1;locus_tag=VA249_RS19995;product=molecular chaperone TorD family protein;protein_id=WP_221070619.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1216343 1216879 . + . ID=gene-VA249_RS20000;Name=VA249_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20000;old_locus_tag=VYA_37910 NZ_AP024166.1 Protein Homology CDS 1216343 1216879 . + 0 ID=cds-WP_221070622.1;Parent=gene-VA249_RS20000;Dbxref=Genbank:WP_221070622.1;Name=WP_221070622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005594688.1;locus_tag=VA249_RS20000;product=4Fe-4S binding protein;protein_id=WP_221070622.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1216977 1217798 . + . ID=gene-VA249_RS20005;Name=VA249_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20005;old_locus_tag=VYA_37920 NZ_AP024166.1 Protein Homology CDS 1216977 1217798 . + 0 ID=cds-WP_221070624.1;Parent=gene-VA249_RS20005;Dbxref=Genbank:WP_221070624.1;Name=WP_221070624.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020194657.1;locus_tag=VA249_RS20005;product=LuxR family transcriptional regulator;protein_id=WP_221070624.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1217881 1219137 . + . ID=gene-VA249_RS20010;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=VA249_RS20010;old_locus_tag=VYA_37930 NZ_AP024166.1 Protein Homology CDS 1217881 1219137 . + 0 ID=cds-WP_221070626.1;Parent=gene-VA249_RS20010;Dbxref=Genbank:WP_221070626.1;Name=WP_221070626.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706325.1;locus_tag=VA249_RS20010;product=tyrosine--tRNA ligase;protein_id=WP_221070626.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1219219 1219578 . - . ID=gene-VA249_RS20015;Name=VA249_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20015;old_locus_tag=VYA_37940 NZ_AP024166.1 Protein Homology CDS 1219219 1219578 . - 0 ID=cds-WP_221072257.1;Parent=gene-VA249_RS20015;Dbxref=Genbank:WP_221072257.1;Name=WP_221072257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017083478.1;locus_tag=VA249_RS20015;product=hypothetical protein;protein_id=WP_221072257.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1219708 1220589 . + . ID=gene-VA249_RS20020;Name=VA249_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20020;old_locus_tag=VYA_37950 NZ_AP024166.1 Protein Homology CDS 1219708 1220589 . + 0 ID=cds-WP_221070627.1;Parent=gene-VA249_RS20020;Dbxref=Genbank:WP_221070627.1;Name=WP_221070627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196069.1;locus_tag=VA249_RS20020;product=LysR family transcriptional regulator;protein_id=WP_221070627.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1220694 1221776 . + . ID=gene-VA249_RS20025;Name=VA249_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20025;old_locus_tag=VYA_37960 NZ_AP024166.1 Protein Homology CDS 1220694 1221776 . + 0 ID=cds-WP_221070629.1;Parent=gene-VA249_RS20025;Dbxref=Genbank:WP_221070629.1;Name=WP_221070629.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010452971.1;locus_tag=VA249_RS20025;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221070629.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1221786 1224842 . + . ID=gene-VA249_RS20030;Name=VA249_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20030;old_locus_tag=VYA_37970 NZ_AP024166.1 Protein Homology CDS 1221786 1224842 . + 0 ID=cds-WP_221070631.1;Parent=gene-VA249_RS20030;Dbxref=Genbank:WP_221070631.1;Name=WP_221070631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017188633.1;locus_tag=VA249_RS20030;product=efflux RND transporter permease subunit;protein_id=WP_221070631.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1224845 1226338 . + . ID=gene-VA249_RS20035;Name=VA249_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20035;old_locus_tag=VYA_37980 NZ_AP024166.1 Protein Homology CDS 1224845 1226338 . + 0 ID=cds-WP_221070634.1;Parent=gene-VA249_RS20035;Dbxref=Genbank:WP_221070634.1;Name=WP_221070634.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196072.1;locus_tag=VA249_RS20035;product=efflux transporter outer membrane subunit;protein_id=WP_221070634.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1226660 1227886 . + . ID=gene-VA249_RS20040;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=VA249_RS20040;old_locus_tag=VYA_37990 NZ_AP024166.1 Protein Homology CDS 1226660 1227886 . + 0 ID=cds-WP_221070636.1;Parent=gene-VA249_RS20040;Dbxref=Genbank:WP_221070636.1;Name=WP_221070636.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017005475.1;locus_tag=VA249_RS20040;product=sodium/glutamate symporter;protein_id=WP_221070636.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1228079 1228336 . + . ID=gene-VA249_RS20045;Name=VA249_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20045;old_locus_tag=VYA_38000 NZ_AP024166.1 Protein Homology CDS 1228079 1228336 . + 0 ID=cds-WP_128813305.1;Parent=gene-VA249_RS20045;Dbxref=Genbank:WP_128813305.1;Name=WP_128813305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392699.1;locus_tag=VA249_RS20045;product=hypothetical protein;protein_id=WP_128813305.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1228579 1230990 . - . ID=gene-VA249_RS20050;Name=VA249_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20050;old_locus_tag=VYA_38010 NZ_AP024166.1 Protein Homology CDS 1228579 1230990 . - 0 ID=cds-WP_221070638.1;Parent=gene-VA249_RS20050;Dbxref=Genbank:WP_221070638.1;Name=WP_221070638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010645875.1;locus_tag=VA249_RS20050;product=glycoside hydrolase family 2 protein;protein_id=WP_221070638.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1231284 1232867 . + . ID=gene-VA249_RS20055;Name=VA249_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20055;old_locus_tag=VYA_38020 NZ_AP024166.1 Protein Homology CDS 1231284 1232867 . + 0 ID=cds-WP_221070640.1;Parent=gene-VA249_RS20055;Dbxref=Genbank:WP_221070640.1;Name=WP_221070640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005479897.1;locus_tag=VA249_RS20055;product=BCCT family transporter;protein_id=WP_221070640.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1233163 1233822 . + . ID=gene-VA249_RS20060;Name=VA249_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20060;old_locus_tag=VYA_38030 NZ_AP024166.1 Protein Homology CDS 1233163 1233822 . + 0 ID=cds-WP_221070642.1;Parent=gene-VA249_RS20060;Dbxref=Genbank:WP_221070642.1;Name=WP_221070642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706350.1;locus_tag=VA249_RS20060;product=HAD-IB family hydrolase;protein_id=WP_221070642.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1233996 1234652 . + . ID=gene-VA249_RS20065;Name=VA249_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20065;old_locus_tag=VYA_38040 NZ_AP024166.1 Protein Homology CDS 1233996 1234652 . + 0 ID=cds-WP_221070644.1;Parent=gene-VA249_RS20065;Dbxref=Genbank:WP_221070644.1;Name=WP_221070644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449834.1;locus_tag=VA249_RS20065;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221070644.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1234639 1235967 . + . ID=gene-VA249_RS20070;Name=VA249_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20070;old_locus_tag=VYA_38050 NZ_AP024166.1 Protein Homology CDS 1234639 1235967 . + 0 ID=cds-WP_221070646.1;Parent=gene-VA249_RS20070;Dbxref=Genbank:WP_221070646.1;Name=WP_221070646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006961383.1;locus_tag=VA249_RS20070;product=HlyD family secretion protein;protein_id=WP_221070646.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1235964 1239065 . + . ID=gene-VA249_RS20075;Name=VA249_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20075;old_locus_tag=VYA_38060 NZ_AP024166.1 Protein Homology CDS 1235964 1239065 . + 0 ID=cds-WP_221070658.1;Parent=gene-VA249_RS20075;Dbxref=Genbank:WP_221070658.1;Name=WP_221070658.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449838.1;locus_tag=VA249_RS20075;product=efflux RND transporter permease subunit;protein_id=WP_221070658.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1239827 1240093 . - . ID=gene-VA249_RS20080;Name=VA249_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20080;old_locus_tag=VYA_38080 NZ_AP024166.1 Protein Homology CDS 1239827 1240093 . - 0 ID=cds-WP_128813308.1;Parent=gene-VA249_RS20080;Dbxref=Genbank:WP_128813308.1;Name=WP_128813308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429553.1;locus_tag=VA249_RS20080;product=hypothetical protein;protein_id=WP_128813308.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1240394 1243552 . - . ID=gene-VA249_RS20085;Name=VA249_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20085;old_locus_tag=VYA_38090 NZ_AP024166.1 Protein Homology CDS 1240394 1243552 . - 0 ID=cds-WP_221070660.1;Parent=gene-VA249_RS20085;Dbxref=Genbank:WP_221070660.1;Name=WP_221070660.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429551.1;locus_tag=VA249_RS20085;product=efflux RND transporter permease subunit;protein_id=WP_221070660.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1243566 1244723 . - . ID=gene-VA249_RS20090;Name=VA249_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20090;old_locus_tag=VYA_38100 NZ_AP024166.1 Protein Homology CDS 1243566 1244723 . - 0 ID=cds-WP_221070662.1;Parent=gene-VA249_RS20090;Dbxref=Genbank:WP_221070662.1;Name=WP_221070662.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392685.1;locus_tag=VA249_RS20090;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_221070662.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1245322 1246833 . + . ID=gene-VA249_RS20095;Name=VA249_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20095;old_locus_tag=VYA_38110 NZ_AP024166.1 Protein Homology CDS 1245322 1246833 . + 0 ID=cds-WP_221070664.1;Parent=gene-VA249_RS20095;Dbxref=Genbank:WP_221070664.1;Name=WP_221070664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196085.1;locus_tag=VA249_RS20095;product=phospholipase D family protein;protein_id=WP_221070664.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1246916 1247596 . - . ID=gene-VA249_RS20100;Name=VA249_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20100;old_locus_tag=VYA_38120 NZ_AP024166.1 Protein Homology CDS 1246916 1247596 . - 0 ID=cds-WP_221070666.1;Parent=gene-VA249_RS20100;Dbxref=Genbank:WP_221070666.1;Name=WP_221070666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453020.1;locus_tag=VA249_RS20100;product=hypothetical protein;protein_id=WP_221070666.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1247606 1248832 . - . ID=gene-VA249_RS20105;Name=VA249_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20105;old_locus_tag=VYA_38130 NZ_AP024166.1 Protein Homology CDS 1247606 1248832 . - 0 ID=cds-WP_221070668.1;Parent=gene-VA249_RS20105;Dbxref=Genbank:WP_221070668.1;Name=WP_221070668.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=VA249_RS20105;product=MFS transporter;protein_id=WP_221070668.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1248874 1250619 . - . ID=gene-VA249_RS20110;Name=VA249_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20110;old_locus_tag=VYA_38140 NZ_AP024166.1 Protein Homology CDS 1248874 1250619 . - 0 ID=cds-WP_221070670.1;Parent=gene-VA249_RS20110;Dbxref=Genbank:WP_221070670.1;Name=WP_221070670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453024.1;locus_tag=VA249_RS20110;product=amidohydrolase;protein_id=WP_221070670.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1250718 1252328 . - . ID=gene-VA249_RS20115;Name=VA249_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20115;old_locus_tag=VYA_38150 NZ_AP024166.1 Protein Homology CDS 1250718 1252328 . - 0 ID=cds-WP_221070672.1;Parent=gene-VA249_RS20115;Dbxref=Genbank:WP_221070672.1;Name=WP_221070672.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453026.1;locus_tag=VA249_RS20115;product=MFS transporter;protein_id=WP_221070672.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1252349 1253413 . - . ID=gene-VA249_RS20120;Name=VA249_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20120;old_locus_tag=VYA_38160 NZ_AP024166.1 Protein Homology CDS 1252349 1253413 . - 0 ID=cds-WP_221070675.1;Parent=gene-VA249_RS20120;Dbxref=Genbank:WP_221070675.1;Name=WP_221070675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024996.2;locus_tag=VA249_RS20120;product=porin;protein_id=WP_221070675.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1253719 1254348 . + . ID=gene-VA249_RS20125;Name=VA249_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20125;old_locus_tag=VYA_38170 NZ_AP024166.1 Protein Homology CDS 1253719 1254348 . + 0 ID=cds-WP_221070677.1;Parent=gene-VA249_RS20125;Dbxref=Genbank:WP_221070677.1;Name=WP_221070677.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=VA249_RS20125;product=winged helix-turn-helix domain-containing protein;protein_id=WP_221070677.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1254330 1254809 . + . ID=gene-VA249_RS20130;Name=VA249_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20130;old_locus_tag=VYA_38180 NZ_AP024166.1 GeneMarkS-2+ CDS 1254330 1254809 . + 0 ID=cds-WP_221070688.1;Parent=gene-VA249_RS20130;Dbxref=Genbank:WP_221070688.1;Name=WP_221070688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS20130;product=hypothetical protein;protein_id=WP_221070688.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1254876 1256240 . + . ID=gene-VA249_RS20135;Name=VA249_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20135;old_locus_tag=VYA_38190 NZ_AP024166.1 Protein Homology CDS 1254876 1256240 . + 0 ID=cds-WP_225927156.1;Parent=gene-VA249_RS20135;Dbxref=Genbank:WP_225927156.1;Name=WP_225927156.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=VA249_RS20135;product=winged helix-turn-helix domain-containing protein;protein_id=WP_225927156.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1256526 1257374 . + . ID=gene-VA249_RS20140;Name=VA249_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20140;old_locus_tag=VYA_38200 NZ_AP024166.1 Protein Homology CDS 1256526 1257374 . + 0 ID=cds-WP_221070692.1;Parent=gene-VA249_RS20140;Dbxref=Genbank:WP_221070692.1;Name=WP_221070692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531805.1;locus_tag=VA249_RS20140;product=hypothetical protein;protein_id=WP_221070692.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1257407 1257844 . - . ID=gene-VA249_RS20145;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=VA249_RS20145;old_locus_tag=VYA_38210 NZ_AP024166.1 Protein Homology CDS 1257407 1257844 . - 0 ID=cds-WP_128813321.1;Parent=gene-VA249_RS20145;Dbxref=Genbank:WP_128813321.1;Name=WP_128813321.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531804.1;locus_tag=VA249_RS20145;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_128813321.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1258228 1260252 . + . ID=gene-VA249_RS20150;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=VA249_RS20150;old_locus_tag=VYA_38220 NZ_AP024166.1 Protein Homology CDS 1258228 1260252 . + 0 ID=cds-WP_221070695.1;Parent=gene-VA249_RS20150;Dbxref=Genbank:WP_221070695.1;Name=WP_221070695.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464199.1;locus_tag=VA249_RS20150;product=elongation factor G;protein_id=WP_221070695.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1260321 1260515 . - . ID=gene-VA249_RS20155;Name=VA249_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20155;old_locus_tag=VYA_38230 NZ_AP024166.1 Protein Homology CDS 1260321 1260515 . - 0 ID=cds-WP_128813323.1;Parent=gene-VA249_RS20155;Dbxref=Genbank:WP_128813323.1;Name=WP_128813323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531795.1;locus_tag=VA249_RS20155;product=hypothetical protein;protein_id=WP_128813323.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1260630 1260845 . - . ID=gene-VA249_RS20160;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=VA249_RS20160;old_locus_tag=VYA_38240 NZ_AP024166.1 Protein Homology CDS 1260630 1260845 . - 0 ID=cds-WP_128813324.1;Parent=gene-VA249_RS20160;Dbxref=Genbank:WP_128813324.1;Name=WP_128813324.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706374.1;locus_tag=VA249_RS20160;product=(Na+)-NQR maturation NqrM;protein_id=WP_128813324.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1260855 1261337 . - . ID=gene-VA249_RS20165;Name=VA249_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20165;old_locus_tag=VYA_38250 NZ_AP024166.1 Protein Homology CDS 1260855 1261337 . - 0 ID=cds-WP_221070697.1;Parent=gene-VA249_RS20165;Dbxref=Genbank:WP_221070697.1;Name=WP_221070697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392670.1;locus_tag=VA249_RS20165;product=NifB/NifX family molybdenum-iron cluster-binding protein;protein_id=WP_221070697.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1261334 1261624 . - . ID=gene-VA249_RS20170;Name=VA249_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20170;old_locus_tag=VYA_38260 NZ_AP024166.1 Protein Homology CDS 1261334 1261624 . - 0 ID=cds-WP_221070699.1;Parent=gene-VA249_RS20170;Dbxref=Genbank:WP_221070699.1;Name=WP_221070699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452940.1;locus_tag=VA249_RS20170;product=DUF134 domain-containing protein;protein_id=WP_221070699.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1262029 1263018 . + . ID=gene-VA249_RS20175;Name=VA249_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20175;old_locus_tag=VYA_38270 NZ_AP024166.1 Protein Homology CDS 1262029 1263018 . + 0 ID=cds-WP_221070701.1;Parent=gene-VA249_RS20175;Dbxref=Genbank:WP_221070701.1;Name=WP_221070701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005441515.1;locus_tag=VA249_RS20175;product=ABC transporter substrate-binding protein;protein_id=WP_221070701.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1263105 1264004 . + . ID=gene-VA249_RS20180;Name=VA249_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20180;old_locus_tag=VYA_38280 NZ_AP024166.1 Protein Homology CDS 1263105 1264004 . + 0 ID=cds-WP_128813327.1;Parent=gene-VA249_RS20180;Dbxref=Genbank:WP_128813327.1;Name=WP_128813327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017059591.1;locus_tag=VA249_RS20180;product=proline/glycine betaine ABC transporter permease;protein_id=WP_128813327.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1263997 1265238 . + . ID=gene-VA249_RS20185;Name=VA249_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20185;old_locus_tag=VYA_38290 NZ_AP024166.1 Protein Homology CDS 1263997 1265238 . + 0 ID=cds-WP_221070703.1;Parent=gene-VA249_RS20185;Dbxref=Genbank:WP_221070703.1;Name=WP_221070703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818489.1;locus_tag=VA249_RS20185;product=glycine betaine/L-proline ABC transporter ATP-binding protein;protein_id=WP_221070703.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1265505 1266014 . + . ID=gene-VA249_RS20190;Name=VA249_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20190;old_locus_tag=VYA_38300 NZ_AP024166.1 Protein Homology CDS 1265505 1266014 . + 0 ID=cds-WP_221070705.1;Parent=gene-VA249_RS20190;Dbxref=Genbank:WP_221070705.1;Name=WP_221070705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464155.1;locus_tag=VA249_RS20190;product=copper resistance protein NlpE N-terminal domain-containing protein;protein_id=WP_221070705.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1266176 1267060 . - . ID=gene-VA249_RS20195;Name=VA249_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20195;old_locus_tag=VYA_38310 NZ_AP024166.1 Protein Homology CDS 1266176 1267060 . - 0 ID=cds-WP_221070707.1;Parent=gene-VA249_RS20195;Dbxref=Genbank:WP_221070707.1;Name=WP_221070707.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706381.1;locus_tag=VA249_RS20195;product=LysR family transcriptional regulator;protein_id=WP_221070707.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1267154 1268053 . + . ID=gene-VA249_RS20200;Name=VA249_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20200;old_locus_tag=VYA_38320 NZ_AP024166.1 Protein Homology CDS 1267154 1268053 . + 0 ID=cds-WP_221070709.1;Parent=gene-VA249_RS20200;Dbxref=Genbank:WP_221070709.1;Name=WP_221070709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453083.1;locus_tag=VA249_RS20200;product=DMT family transporter;protein_id=WP_221070709.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1268270 1269361 . + . ID=gene-VA249_RS20205;Name=VA249_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20205;old_locus_tag=VYA_38330 NZ_AP024166.1 Protein Homology CDS 1268270 1269361 . + 0 ID=cds-WP_221070712.1;Parent=gene-VA249_RS20205;Dbxref=Genbank:WP_221070712.1;Name=WP_221070712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012129987.1;locus_tag=VA249_RS20205;product=transporter substrate-binding domain-containing protein;protein_id=WP_221070712.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1269462 1269980 . - . ID=gene-VA249_RS20210;Name=VA249_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20210;old_locus_tag=VYA_38340 NZ_AP024166.1 Protein Homology CDS 1269462 1269980 . - 0 ID=cds-WP_221070714.1;Parent=gene-VA249_RS20210;Dbxref=Genbank:WP_221070714.1;Name=WP_221070714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015312896.1;locus_tag=VA249_RS20210;product=glycine zipper 2TM domain-containing protein;protein_id=WP_221070714.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1270200 1270547 . - . ID=gene-VA249_RS20215;Name=VA249_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20215;old_locus_tag=VYA_38350 NZ_AP024166.1 Protein Homology CDS 1270200 1270547 . - 0 ID=cds-WP_211918642.1;Parent=gene-VA249_RS20215;Dbxref=Genbank:WP_211918642.1;Name=WP_211918642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429480.1;locus_tag=VA249_RS20215;product=GlpM family protein;protein_id=WP_211918642.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1270552 1270911 . - . ID=gene-VA249_RS20220;Name=VA249_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20220;old_locus_tag=VYA_38360 NZ_AP024166.1 Protein Homology CDS 1270552 1270911 . - 0 ID=cds-WP_221072259.1;Parent=gene-VA249_RS20220;Dbxref=Genbank:WP_221072259.1;Name=WP_221072259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436373.1;locus_tag=VA249_RS20220;product=acyl-CoA synthetase;protein_id=WP_221072259.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1271078 1272388 . - . ID=gene-VA249_RS20225;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=VA249_RS20225;old_locus_tag=VYA_38370 NZ_AP024166.1 Protein Homology CDS 1271078 1272388 . - 0 ID=cds-WP_221070716.1;Parent=gene-VA249_RS20225;Dbxref=Genbank:WP_221070716.1;Name=WP_221070716.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706387.1;locus_tag=VA249_RS20225;product=nicotinate phosphoribosyltransferase;protein_id=WP_221070716.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1272779 1273504 . + . ID=gene-VA249_RS20230;Name=VA249_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20230;old_locus_tag=VYA_38380 NZ_AP024166.1 Protein Homology CDS 1272779 1273504 . + 0 ID=cds-WP_221070718.1;Parent=gene-VA249_RS20230;Dbxref=Genbank:WP_221070718.1;Name=WP_221070718.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005373953.1;locus_tag=VA249_RS20230;product=NUDIX domain-containing protein;protein_id=WP_221070718.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1273536 1274189 . + . ID=gene-VA249_RS20235;Name=VA249_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20235;old_locus_tag=VYA_38390 NZ_AP024166.1 Protein Homology CDS 1273536 1274189 . + 0 ID=cds-WP_221070719.1;Parent=gene-VA249_RS20235;Dbxref=Genbank:WP_221070719.1;Name=WP_221070719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706388.1;locus_tag=VA249_RS20235;product=isochorismatase family protein;protein_id=WP_221070719.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1274278 1274790 . - . ID=gene-VA249_RS20245;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=VA249_RS20245;old_locus_tag=VYA_38400 NZ_AP024166.1 Protein Homology CDS 1274278 1274790 . - 0 ID=cds-WP_221070721.1;Parent=gene-VA249_RS20245;Dbxref=Genbank:WP_221070721.1;Name=WP_221070721.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082330.1;locus_tag=VA249_RS20245;product=superoxide dismutase family protein;protein_id=WP_221070721.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1275049 1275960 . - . ID=gene-VA249_RS20250;Name=VA249_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20250;old_locus_tag=VYA_38410 NZ_AP024166.1 Protein Homology CDS 1275049 1275960 . - 0 ID=cds-WP_221070723.1;Parent=gene-VA249_RS20250;Dbxref=Genbank:WP_221070723.1;Name=WP_221070723.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017020551.1;locus_tag=VA249_RS20250;product=glucosaminidase domain-containing protein;protein_id=WP_221070723.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1276175 1277068 . + . ID=gene-VA249_RS20255;Name=VA249_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20255;old_locus_tag=VYA_38420 NZ_AP024166.1 Protein Homology CDS 1276175 1277068 . + 0 ID=cds-WP_221070725.1;Parent=gene-VA249_RS20255;Dbxref=Genbank:WP_221070725.1;Name=WP_221070725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005452998.1;locus_tag=VA249_RS20255;product=DMT family transporter;protein_id=WP_221070725.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1277065 1277454 . - . ID=gene-VA249_RS20260;Name=VA249_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20260;old_locus_tag=VYA_38430 NZ_AP024166.1 Protein Homology CDS 1277065 1277454 . - 0 ID=cds-WP_221070727.1;Parent=gene-VA249_RS20260;Dbxref=Genbank:WP_221070727.1;Name=WP_221070727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016767347.1;locus_tag=VA249_RS20260;product=VOC family protein;protein_id=WP_221070727.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1277612 1278097 . + . ID=gene-VA249_RS20265;Name=VA249_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20265;old_locus_tag=VYA_38440 NZ_AP024166.1 Protein Homology CDS 1277612 1278097 . + 0 ID=cds-WP_221070729.1;Parent=gene-VA249_RS20265;Dbxref=Genbank:WP_221070729.1;Name=WP_221070729.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429445.1;locus_tag=VA249_RS20265;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_221070729.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1278489 1278929 . + . ID=gene-VA249_RS20270;Name=VA249_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20270;old_locus_tag=VYA_38450 NZ_AP024166.1 Protein Homology CDS 1278489 1278929 . + 0 ID=cds-WP_221070731.1;Parent=gene-VA249_RS20270;Dbxref=Genbank:WP_221070731.1;Name=WP_221070731.1;Ontology_term=GO:0009401,GO:0008982,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627275.1;locus_tag=VA249_RS20270;product=fructose PTS transporter subunit IIA;protein_id=WP_221070731.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1278941 1280341 . + . ID=gene-VA249_RS20275;Name=VA249_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20275;old_locus_tag=VYA_38460 NZ_AP024166.1 Protein Homology CDS 1278941 1280341 . + 0 ID=cds-WP_221070733.1;Parent=gene-VA249_RS20275;Dbxref=Genbank:WP_221070733.1;Name=WP_221070733.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000105920.1;locus_tag=VA249_RS20275;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_221070733.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1280463 1280630 . + . ID=gene-VA249_RS20280;Name=VA249_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20280;old_locus_tag=VYA_38470 NZ_AP024166.1 Protein Homology CDS 1280463 1280630 . + 0 ID=cds-WP_211918620.1;Parent=gene-VA249_RS20280;Dbxref=Genbank:WP_211918620.1;Name=WP_211918620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006880270.1;locus_tag=VA249_RS20280;product=hypothetical protein;protein_id=WP_211918620.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1280725 1281048 . + . ID=gene-VA249_RS20285;Name=VA249_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20285;old_locus_tag=VYA_38480 NZ_AP024166.1 Protein Homology CDS 1280725 1281048 . + 0 ID=cds-WP_225927157.1;Parent=gene-VA249_RS20285;Dbxref=Genbank:WP_225927157.1;Name=WP_225927157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004412984.1;locus_tag=VA249_RS20285;product=rhodanese-like domain-containing protein;protein_id=WP_225927157.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1281487 1282389 . + . ID=gene-VA249_RS20290;Name=VA249_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20290;old_locus_tag=VYA_38490 NZ_AP024166.1 Protein Homology CDS 1281487 1282389 . + 0 ID=cds-WP_221070737.1;Parent=gene-VA249_RS20290;Dbxref=Genbank:WP_221070737.1;Name=WP_221070737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005469268.1;locus_tag=VA249_RS20290;product=LysR family transcriptional regulator;protein_id=WP_221070737.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1282468 1283463 . + . ID=gene-VA249_RS20295;Name=VA249_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20295;old_locus_tag=VYA_38500 NZ_AP024166.1 Protein Homology CDS 1282468 1283463 . + 0 ID=cds-WP_221070740.1;Parent=gene-VA249_RS20295;Dbxref=Genbank:WP_221070740.1;Name=WP_221070740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706418.1;locus_tag=VA249_RS20295;product=linear amide C-N hydrolase;protein_id=WP_221070740.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1283592 1283762 . - . ID=gene-VA249_RS20300;Name=VA249_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20300;old_locus_tag=VYA_38510 NZ_AP024166.1 Protein Homology CDS 1283592 1283762 . - 0 ID=cds-WP_221070742.1;Parent=gene-VA249_RS20300;Dbxref=Genbank:WP_221070742.1;Name=WP_221070742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706423.1;locus_tag=VA249_RS20300;product=hypothetical protein;protein_id=WP_221070742.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1283861 1284736 . + . ID=gene-VA249_RS20305;Name=VA249_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20305;old_locus_tag=VYA_38520 NZ_AP024166.1 Protein Homology CDS 1283861 1284736 . + 0 ID=cds-WP_221070744.1;Parent=gene-VA249_RS20305;Dbxref=Genbank:WP_221070744.1;Name=WP_221070744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697944.1;locus_tag=VA249_RS20305;product=LysR family transcriptional regulator;protein_id=WP_221070744.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1284896 1285780 . - . ID=gene-VA249_RS20310;Name=VA249_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20310;old_locus_tag=VYA_38530 NZ_AP024166.1 Protein Homology CDS 1284896 1285780 . - 0 ID=cds-WP_221070746.1;Parent=gene-VA249_RS20310;Dbxref=Genbank:WP_221070746.1;Name=WP_221070746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818451.1;locus_tag=VA249_RS20310;product=glutathione S-transferase C-terminal domain-containing protein;protein_id=WP_221070746.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1285844 1286383 . - . ID=gene-VA249_RS20315;Name=VA249_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20315;old_locus_tag=VYA_38540 NZ_AP024166.1 Protein Homology CDS 1285844 1286383 . - 0 ID=cds-WP_010646864.1;Parent=gene-VA249_RS20315;Dbxref=Genbank:WP_010646864.1;Name=WP_010646864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453160.1;locus_tag=VA249_RS20315;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_010646864.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1286533 1287483 . + . ID=gene-VA249_RS20320;Name=VA249_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20320;old_locus_tag=VYA_38550 NZ_AP024166.1 Protein Homology CDS 1286533 1287483 . + 0 ID=cds-WP_221070748.1;Parent=gene-VA249_RS20320;Dbxref=Genbank:WP_221070748.1;Name=WP_221070748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189644.1;locus_tag=VA249_RS20320;product=LysR family transcriptional regulator;protein_id=WP_221070748.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1287600 1288031 . - . ID=gene-VA249_RS20325;Name=VA249_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20325;old_locus_tag=VYA_38560 NZ_AP024166.1 Protein Homology CDS 1287600 1288031 . - 0 ID=cds-WP_221072262.1;Parent=gene-VA249_RS20325;Dbxref=Genbank:WP_221072262.1;Name=WP_221072262.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697948.1;locus_tag=VA249_RS20325;product=VF530 family DNA-binding protein;protein_id=WP_221072262.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1288231 1289811 . - . ID=gene-VA249_RS20330;Name=VA249_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20330;old_locus_tag=VYA_38570 NZ_AP024166.1 Protein Homology CDS 1288231 1289811 . - 0 ID=cds-WP_242598084.1;Parent=gene-VA249_RS20330;Dbxref=Genbank:WP_242598084.1;Name=WP_242598084.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195328.1;locus_tag=VA249_RS20330;product=ABC-F family ATPase;protein_id=WP_242598084.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1290013 1290207 . + . ID=gene-VA249_RS20335;Name=VA249_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20335;old_locus_tag=VYA_38580 NZ_AP024166.1 GeneMarkS-2+ CDS 1290013 1290207 . + 0 ID=cds-WP_221070750.1;Parent=gene-VA249_RS20335;Dbxref=Genbank:WP_221070750.1;Name=WP_221070750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS20335;product=hypothetical protein;protein_id=WP_221070750.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1290219 1290854 . + . ID=gene-VA249_RS20340;Name=VA249_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20340;old_locus_tag=VYA_38590 NZ_AP024166.1 GeneMarkS-2+ CDS 1290219 1290854 . + 0 ID=cds-WP_221070753.1;Parent=gene-VA249_RS20340;Dbxref=Genbank:WP_221070753.1;Name=WP_221070753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS20340;product=hypothetical protein;protein_id=WP_221070753.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1290971 1292161 . + . ID=gene-VA249_RS20345;Name=VA249_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20345;old_locus_tag=VYA_38600 NZ_AP024166.1 Protein Homology CDS 1290971 1292161 . + 0 ID=cds-WP_221070755.1;Parent=gene-VA249_RS20345;Dbxref=Genbank:WP_221070755.1;Name=WP_221070755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697977.1;locus_tag=VA249_RS20345;product=MFS transporter;protein_id=WP_221070755.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1292136 1293107 . + . ID=gene-VA249_RS20350;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=VA249_RS20350;old_locus_tag=VYA_38610 NZ_AP024166.1 Protein Homology CDS 1292136 1293107 . + 0 ID=cds-WP_221070759.1;Parent=gene-VA249_RS20350;Dbxref=Genbank:WP_221070759.1;Name=WP_221070759.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448975.1;locus_tag=VA249_RS20350;product=HTH-type transcriptional regulator YidZ;protein_id=WP_221070759.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 1293131 1293298 . + . ID=gene-VA249_RS24150;Name=VA249_RS24150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24150;partial=true;pseudo=true;start_range=.,1293131 NZ_AP024166.1 Protein Homology CDS 1293131 1293298 . + 0 ID=cds-VA249_RS24150;Parent=gene-VA249_RS24150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005436234.1;locus_tag=VA249_RS24150;partial=true;product=EamA/RhaT family transporter;pseudo=true;start_range=.,1293131;transl_table=11 NZ_AP024166.1 RefSeq gene 1293688 1295889 . + . ID=gene-VA249_RS20355;Name=VA249_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20355;old_locus_tag=VYA_38620 NZ_AP024166.1 Protein Homology CDS 1293688 1295889 . + 0 ID=cds-WP_221070761.1;Parent=gene-VA249_RS20355;Dbxref=Genbank:WP_221070761.1;Name=WP_221070761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189667.1;locus_tag=VA249_RS20355;product=FUSC family protein;protein_id=WP_221070761.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1295900 1297555 . + . ID=gene-VA249_RS20360;Name=VA249_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20360;old_locus_tag=VYA_38630 NZ_AP024166.1 Protein Homology CDS 1295900 1297555 . + 0 ID=cds-WP_221070763.1;Parent=gene-VA249_RS20360;Dbxref=Genbank:WP_221070763.1;Name=WP_221070763.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189668.1;locus_tag=VA249_RS20360;product=TolC family protein;protein_id=WP_221070763.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1297555 1297758 . + . ID=gene-VA249_RS20365;Name=VA249_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20365;old_locus_tag=VYA_38640 NZ_AP024166.1 Protein Homology CDS 1297555 1297758 . + 0 ID=cds-WP_221070765.1;Parent=gene-VA249_RS20365;Dbxref=Genbank:WP_221070765.1;Name=WP_221070765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005453214.1;locus_tag=VA249_RS20365;product=DUF1656 domain-containing protein;protein_id=WP_221070765.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1297771 1298658 . + . ID=gene-VA249_RS20370;Name=VA249_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20370;old_locus_tag=VYA_38650 NZ_AP024166.1 Protein Homology CDS 1297771 1298658 . + 0 ID=cds-WP_221070767.1;Parent=gene-VA249_RS20370;Dbxref=Genbank:WP_221070767.1;Name=WP_221070767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019821561.1;locus_tag=VA249_RS20370;product=HlyD family secretion protein;protein_id=WP_221070767.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1298673 1299359 . + . ID=gene-VA249_RS20375;Name=VA249_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20375;old_locus_tag=VYA_38660 NZ_AP024166.1 Protein Homology CDS 1298673 1299359 . + 0 ID=cds-WP_221070769.1;Parent=gene-VA249_RS20375;Dbxref=Genbank:WP_221070769.1;Name=WP_221070769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005386935.1;locus_tag=VA249_RS20375;product=ion channel;protein_id=WP_221070769.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1299352 1300497 . + . ID=gene-VA249_RS20380;Name=VA249_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20380;old_locus_tag=VYA_38670 NZ_AP024166.1 Protein Homology CDS 1299352 1300497 . + 0 ID=cds-WP_128813349.1;Parent=gene-VA249_RS20380;Dbxref=Genbank:WP_128813349.1;Name=WP_128813349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697986.1;locus_tag=VA249_RS20380;product=AI-2E family transporter;protein_id=WP_128813349.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1300748 1301419 . + . ID=gene-VA249_RS20385;Name=VA249_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20385;old_locus_tag=VYA_38680 NZ_AP024166.1 Protein Homology CDS 1300748 1301419 . + 0 ID=cds-WP_128813350.1;Parent=gene-VA249_RS20385;Dbxref=Genbank:WP_128813350.1;Name=WP_128813350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646834.1;locus_tag=VA249_RS20385;product=DUF2057 domain-containing protein;protein_id=WP_128813350.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1301573 1302409 . - . ID=gene-VA249_RS20390;Name=VA249_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20390;old_locus_tag=VYA_38690 NZ_AP024166.1 Protein Homology CDS 1301573 1302409 . - 0 ID=cds-WP_221070771.1;Parent=gene-VA249_RS20390;Dbxref=Genbank:WP_221070771.1;Name=WP_221070771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706464.1;locus_tag=VA249_RS20390;product=DUF481 domain-containing protein;protein_id=WP_221070771.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1302676 1303440 . - . ID=gene-VA249_RS20395;Name=VA249_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20395;old_locus_tag=VYA_38700 NZ_AP024166.1 Protein Homology CDS 1302676 1303440 . - 0 ID=cds-WP_221070773.1;Parent=gene-VA249_RS20395;Dbxref=Genbank:WP_221070773.1;Name=WP_221070773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130049.1;locus_tag=VA249_RS20395;product=ferredoxin--NADP reductase;protein_id=WP_221070773.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1303632 1304084 . + . ID=gene-VA249_RS20400;Name=VA249_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20400;old_locus_tag=VYA_38710 NZ_AP024166.1 Protein Homology CDS 1303632 1304084 . + 0 ID=cds-WP_221070775.1;Parent=gene-VA249_RS20400;Dbxref=Genbank:WP_221070775.1;Name=WP_221070775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529529.1;locus_tag=VA249_RS20400;product=acyl-CoA thioesterase;protein_id=WP_221070775.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1304433 1304651 . - . ID=gene-VA249_RS20405;Name=VA249_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20405;old_locus_tag=VYA_38720 NZ_AP024166.1 Protein Homology CDS 1304433 1304651 . - 0 ID=cds-WP_128813353.1;Parent=gene-VA249_RS20405;Dbxref=Genbank:WP_128813353.1;Name=WP_128813353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429327.1;locus_tag=VA249_RS20405;product=VF530 family protein;protein_id=WP_128813353.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1304785 1305714 . + . ID=gene-VA249_RS20410;Name=VA249_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20410;old_locus_tag=VYA_38730 NZ_AP024166.1 Protein Homology CDS 1304785 1305714 . + 0 ID=cds-WP_221070777.1;Parent=gene-VA249_RS20410;Dbxref=Genbank:WP_221070777.1;Name=WP_221070777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195368.1;locus_tag=VA249_RS20410;product=LysR substrate-binding domain-containing protein;protein_id=WP_221070777.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1305786 1306076 . - . ID=gene-VA249_RS20415;Name=VA249_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20415;old_locus_tag=VYA_38740 NZ_AP024166.1 Protein Homology CDS 1305786 1306076 . - 0 ID=cds-WP_128813355.1;Parent=gene-VA249_RS20415;Dbxref=Genbank:WP_128813355.1;Name=WP_128813355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581564.1;locus_tag=VA249_RS20415;product=antibiotic biosynthesis monooxygenase;protein_id=WP_128813355.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1306333 1307172 . + . ID=gene-VA249_RS20420;Name=VA249_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20420;old_locus_tag=VYA_38750 NZ_AP024166.1 Protein Homology CDS 1306333 1307172 . + 0 ID=cds-WP_221070780.1;Parent=gene-VA249_RS20420;Dbxref=Genbank:WP_221070780.1;Name=WP_221070780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017070907.1;locus_tag=VA249_RS20420;product=LysR family transcriptional regulator;protein_id=WP_221070780.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1307279 1307998 . + . ID=gene-VA249_RS20425;Name=VA249_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20425;old_locus_tag=VYA_38760 NZ_AP024166.1 Protein Homology CDS 1307279 1307998 . + 0 ID=cds-WP_128813357.1;Parent=gene-VA249_RS20425;Dbxref=Genbank:WP_128813357.1;Name=WP_128813357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017092618.1;locus_tag=VA249_RS20425;product=hypothetical protein;protein_id=WP_128813357.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1308655 1310274 . + . ID=gene-VA249_RS20430;Name=VA249_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20430;old_locus_tag=VYA_38770 NZ_AP024166.1 Protein Homology CDS 1308655 1310274 . + 0 ID=cds-WP_221070781.1;Parent=gene-VA249_RS20430;Dbxref=Genbank:WP_221070781.1;Name=WP_221070781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019822909.1;locus_tag=VA249_RS20430;product=MBL fold metallo-hydrolase;protein_id=WP_221070781.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1310338 1310715 . + . ID=gene-VA249_RS20435;Name=VA249_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20435;old_locus_tag=VYA_38780 NZ_AP024166.1 Protein Homology CDS 1310338 1310715 . + 0 ID=cds-WP_221070783.1;Parent=gene-VA249_RS20435;Dbxref=Genbank:WP_221070783.1;Name=WP_221070783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019822911.1;locus_tag=VA249_RS20435;product=hypothetical protein;protein_id=WP_221070783.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1310712 1311149 . + . ID=gene-VA249_RS20440;Name=VA249_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20440;old_locus_tag=VYA_38790 NZ_AP024166.1 Protein Homology CDS 1310712 1311149 . + 0 ID=cds-WP_221070785.1;Parent=gene-VA249_RS20440;Dbxref=Genbank:WP_221070785.1;Name=WP_221070785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005440623.1;locus_tag=VA249_RS20440;product=hypothetical protein;protein_id=WP_221070785.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1311260 1312429 . - . ID=gene-VA249_RS20445;Name=VA249_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20445;old_locus_tag=VYA_38800 NZ_AP024166.1 Protein Homology CDS 1311260 1312429 . - 0 ID=cds-WP_221070787.1;Parent=gene-VA249_RS20445;Dbxref=Genbank:WP_221070787.1;Name=WP_221070787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697995.1;locus_tag=VA249_RS20445;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_221070787.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1312645 1313940 . + . ID=gene-VA249_RS20450;Name=VA249_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20450;old_locus_tag=VYA_38810 NZ_AP024166.1 Protein Homology CDS 1312645 1313940 . + 0 ID=cds-WP_221070789.1;Parent=gene-VA249_RS20450;Dbxref=Genbank:WP_221070789.1;Name=WP_221070789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529522.1;locus_tag=VA249_RS20450;product=alpha/beta fold hydrolase;protein_id=WP_221070789.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1314046 1314534 . - . ID=gene-VA249_RS20455;Name=VA249_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20455;old_locus_tag=VYA_38820 NZ_AP024166.1 Protein Homology CDS 1314046 1314534 . - 0 ID=cds-WP_221070790.1;Parent=gene-VA249_RS20455;Dbxref=Genbank:WP_221070790.1;Name=WP_221070790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010646824.1;locus_tag=VA249_RS20455;product=GNAT family N-acetyltransferase;protein_id=WP_221070790.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1315026 1315526 . + . ID=gene-VA249_RS20460;Name=VA249_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20460;old_locus_tag=VYA_38830 NZ_AP024166.1 Protein Homology CDS 1315026 1315526 . + 0 ID=cds-WP_128813364.1;Parent=gene-VA249_RS20460;Dbxref=Genbank:WP_128813364.1;Name=WP_128813364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698002.1;locus_tag=VA249_RS20460;product=fasciclin domain-containing protein;protein_id=WP_128813364.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1315644 1316333 . + . ID=gene-VA249_RS20465;Name=VA249_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20465;old_locus_tag=VYA_38840 NZ_AP024166.1 Protein Homology CDS 1315644 1316333 . + 0 ID=cds-WP_221070792.1;Parent=gene-VA249_RS20465;Dbxref=Genbank:WP_221070792.1;Name=WP_221070792.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529504.1;locus_tag=VA249_RS20465;product=flavin reductase;protein_id=WP_221070792.1;transl_table=11 NZ_AP024166.1 cmsearch riboswitch 1316532 1316637 . + . ID=id-NZ_AP024166.1:1316532..1316637;Dbxref=RFAM:RF01051;Note=cyclic di-GMP riboswitch class I;bound_moiety=cyclic di-GMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024166.1 RefSeq gene 1316750 1318210 . + . ID=gene-VA249_RS20470;Name=gbpA;gbkey=Gene;gene=gbpA;gene_biotype=protein_coding;locus_tag=VA249_RS20470;old_locus_tag=VYA_38850 NZ_AP024166.1 Protein Homology CDS 1316750 1318210 . + 0 ID=cds-WP_221070795.1;Parent=gene-VA249_RS20470;Dbxref=Genbank:WP_221070795.1;Name=WP_221070795.1;gbkey=CDS;gene=gbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005397801.1;locus_tag=VA249_RS20470;product=N-acetylglucosamine-binding protein GbpA;protein_id=WP_221070795.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1318302 1319471 . - . ID=gene-VA249_RS20475;Name=VA249_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20475;old_locus_tag=VYA_38860 NZ_AP024166.1 Protein Homology CDS 1318302 1319471 . - 0 ID=cds-WP_221070796.1;Parent=gene-VA249_RS20475;Dbxref=Genbank:WP_221070796.1;Name=WP_221070796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706478.1;locus_tag=VA249_RS20475;product=DUF1501 domain-containing protein;protein_id=WP_221070796.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1319480 1320868 . - . ID=gene-VA249_RS20480;Name=VA249_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20480;old_locus_tag=VYA_38870 NZ_AP024166.1 Protein Homology CDS 1319480 1320868 . - 0 ID=cds-WP_221070798.1;Parent=gene-VA249_RS20480;Dbxref=Genbank:WP_221070798.1;Name=WP_221070798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195379.1;locus_tag=VA249_RS20480;product=DUF1800 family protein;protein_id=WP_221070798.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1321238 1323046 . + . ID=gene-VA249_RS20485;Name=VA249_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20485;old_locus_tag=VYA_38880 NZ_AP024166.1 Protein Homology CDS 1321238 1323046 . + 0 ID=cds-WP_221070800.1;Parent=gene-VA249_RS20485;Dbxref=Genbank:WP_221070800.1;Name=WP_221070800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=VA249_RS20485;product=methyl-accepting chemotaxis protein;protein_id=WP_221070800.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1323088 1323960 . - . ID=gene-VA249_RS20490;Name=VA249_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20490;old_locus_tag=VYA_38890 NZ_AP024166.1 Protein Homology CDS 1323088 1323960 . - 0 ID=cds-WP_221070802.1;Parent=gene-VA249_RS20490;Dbxref=Genbank:WP_221070802.1;Name=WP_221070802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600150.1;locus_tag=VA249_RS20490;product=patatin family protein;protein_id=WP_221070802.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1324147 1325295 . - . ID=gene-VA249_RS20495;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=VA249_RS20495;old_locus_tag=VYA_38900 NZ_AP024166.1 Protein Homology CDS 1324147 1325295 . - 0 ID=cds-WP_211918551.1;Parent=gene-VA249_RS20495;Dbxref=Genbank:WP_211918551.1;Name=WP_211918551.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017790231.1;locus_tag=VA249_RS20495;product=lactaldehyde reductase;protein_id=WP_211918551.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1325310 1325957 . - . ID=gene-VA249_RS20500;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=VA249_RS20500;old_locus_tag=VYA_38910 NZ_AP024166.1 Protein Homology CDS 1325310 1325957 . - 0 ID=cds-WP_221070807.1;Parent=gene-VA249_RS20500;Dbxref=Genbank:WP_221070807.1;Name=WP_221070807.1;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150689.1;locus_tag=VA249_RS20500;product=L-fuculose-phosphate aldolase;protein_id=WP_221070807.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1325985 1326416 . - . ID=gene-VA249_RS20505;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=VA249_RS20505;old_locus_tag=VYA_38920 NZ_AP024166.1 Protein Homology CDS 1325985 1326416 . - 0 ID=cds-WP_221070809.1;Parent=gene-VA249_RS20505;Dbxref=Genbank:WP_221070809.1;Name=WP_221070809.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911680.1;locus_tag=VA249_RS20505;product=L-fucose mutarotase;protein_id=WP_221070809.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1326409 1327854 . - . ID=gene-VA249_RS20510;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=VA249_RS20510;old_locus_tag=VYA_38930 NZ_AP024166.1 Protein Homology CDS 1326409 1327854 . - 0 ID=cds-WP_221070811.1;Parent=gene-VA249_RS20510;Dbxref=Genbank:WP_221070811.1;Name=WP_221070811.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818407.1;locus_tag=VA249_RS20510;product=L-fuculokinase;protein_id=WP_221070811.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1327896 1329644 . - . ID=gene-VA249_RS20515;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=VA249_RS20515;old_locus_tag=VYA_38940 NZ_AP024166.1 Protein Homology CDS 1327896 1329644 . - 0 ID=cds-WP_221070813.1;Parent=gene-VA249_RS20515;Dbxref=Genbank:WP_221070813.1;Name=WP_221070813.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150692.1;locus_tag=VA249_RS20515;product=L-fucose isomerase;protein_id=WP_221070813.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1329676 1330986 . - . ID=gene-VA249_RS20520;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=VA249_RS20520;old_locus_tag=VYA_38950 NZ_AP024166.1 Protein Homology CDS 1329676 1330986 . - 0 ID=cds-WP_221070814.1;Parent=gene-VA249_RS20520;Dbxref=Genbank:WP_221070814.1;Name=WP_221070814.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698009.1;locus_tag=VA249_RS20520;product=L-fucose:H+ symporter permease;protein_id=WP_221070814.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1331073 1331783 . - . ID=gene-VA249_RS20525;Name=VA249_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20525;old_locus_tag=VYA_38960 NZ_AP024166.1 Protein Homology CDS 1331073 1331783 . - 0 ID=cds-WP_221070816.1;Parent=gene-VA249_RS20525;Dbxref=Genbank:WP_221070816.1;Name=WP_221070816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009698010.1;locus_tag=VA249_RS20525;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_221070816.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1332011 1332652 . - . ID=gene-VA249_RS20530;Name=VA249_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20530;old_locus_tag=VYA_38970 NZ_AP024166.1 Protein Homology CDS 1332011 1332652 . - 0 ID=cds-WP_221070819.1;Parent=gene-VA249_RS20530;Dbxref=Genbank:WP_221070819.1;Name=WP_221070819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447202.1;locus_tag=VA249_RS20530;product=MarC family protein;protein_id=WP_221070819.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1332767 1333897 . - . ID=gene-VA249_RS20535;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=VA249_RS20535;old_locus_tag=VYA_38980 NZ_AP024166.1 Protein Homology CDS 1332767 1333897 . - 0 ID=cds-WP_221070822.1;Parent=gene-VA249_RS20535;Dbxref=Genbank:WP_221070822.1;Name=WP_221070822.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149825.1;locus_tag=VA249_RS20535;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_221070822.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1334043 1334765 . + . ID=gene-VA249_RS20540;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=VA249_RS20540;old_locus_tag=VYA_38990 NZ_AP024166.1 Protein Homology CDS 1334043 1334765 . + 0 ID=cds-WP_221070824.1;Parent=gene-VA249_RS20540;Dbxref=Genbank:WP_221070824.1;Name=WP_221070824.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004740374.1;locus_tag=VA249_RS20540;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_221070824.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1334894 1335505 . - . ID=gene-VA249_RS20545;Name=VA249_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20545;old_locus_tag=VYA_39000 NZ_AP024166.1 Protein Homology CDS 1334894 1335505 . - 0 ID=cds-WP_221070826.1;Parent=gene-VA249_RS20545;Dbxref=Genbank:WP_221070826.1;Name=WP_221070826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005437894.1;locus_tag=VA249_RS20545;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221070826.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1335767 1336582 . + . ID=gene-VA249_RS20550;Name=VA249_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20550;old_locus_tag=VYA_39020 NZ_AP024166.1 Protein Homology CDS 1335767 1336582 . + 0 ID=cds-WP_221070828.1;Parent=gene-VA249_RS20550;Dbxref=Genbank:WP_221070828.1;Name=WP_221070828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195395.1;locus_tag=VA249_RS20550;product=TonB-dependent receptor;protein_id=WP_221070828.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1336595 1337716 . + . ID=gene-VA249_RS20555;Name=VA249_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20555;old_locus_tag=VYA_39030 NZ_AP024166.1 Protein Homology CDS 1336595 1337716 . + 0 ID=cds-WP_221070830.1;Parent=gene-VA249_RS20555;Dbxref=Genbank:WP_221070830.1;Name=WP_221070830.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450655.1;locus_tag=VA249_RS20555;product=BamA/TamA family outer membrane protein;protein_id=WP_221070830.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1337726 1338790 . + . ID=gene-VA249_RS20560;Name=VA249_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20560;old_locus_tag=VYA_39040 NZ_AP024166.1 Protein Homology CDS 1337726 1338790 . + 0 ID=cds-WP_221070832.1;Parent=gene-VA249_RS20560;Dbxref=Genbank:WP_221070832.1;Name=WP_221070832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005437889.1;locus_tag=VA249_RS20560;product=DUF4056 domain-containing protein;protein_id=WP_221070832.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1339108 1340418 . + . ID=gene-VA249_RS20565;Name=VA249_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20565;old_locus_tag=VYA_39050 NZ_AP024166.1 Protein Homology CDS 1339108 1340418 . + 0 ID=cds-WP_221070834.1;Parent=gene-VA249_RS20565;Dbxref=Genbank:WP_221070834.1;Name=WP_221070834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234981.1;locus_tag=VA249_RS20565;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_221070834.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1340627 1341001 . - . ID=gene-VA249_RS20570;Name=VA249_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20570;old_locus_tag=VYA_39060 NZ_AP024166.1 Protein Homology CDS 1340627 1341001 . - 0 ID=cds-WP_221070836.1;Parent=gene-VA249_RS20570;Dbxref=Genbank:WP_221070836.1;Name=WP_221070836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429273.1;locus_tag=VA249_RS20570;product=YkvA family protein;protein_id=WP_221070836.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1341215 1342339 . - . ID=gene-VA249_RS20575;Name=VA249_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20575;old_locus_tag=VYA_39070 NZ_AP024166.1 Protein Homology CDS 1341215 1342339 . - 0 ID=cds-WP_221070839.1;Parent=gene-VA249_RS20575;Dbxref=Genbank:WP_221070839.1;Name=WP_221070839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396744.1;locus_tag=VA249_RS20575;product=M20 family metallopeptidase;protein_id=WP_221070839.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1342349 1342816 . - . ID=gene-VA249_RS20580;Name=VA249_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20580;old_locus_tag=VYA_39080 NZ_AP024166.1 Protein Homology CDS 1342349 1342816 . - 0 ID=cds-WP_053303905.1;Parent=gene-VA249_RS20580;Dbxref=Genbank:WP_053303905.1;Name=WP_053303905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073204.1;locus_tag=VA249_RS20580;product=YjiG family protein;protein_id=WP_053303905.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1342816 1343556 . - . ID=gene-VA249_RS20585;Name=VA249_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20585;old_locus_tag=VYA_39090 NZ_AP024166.1 Protein Homology CDS 1342816 1343556 . - 0 ID=cds-WP_128813384.1;Parent=gene-VA249_RS20585;Dbxref=Genbank:WP_128813384.1;Name=WP_128813384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008216770.1;locus_tag=VA249_RS20585;product=YjiH family protein;protein_id=WP_128813384.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1344048 1346108 . - . ID=gene-VA249_RS20590;Name=VA249_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20590;old_locus_tag=VYA_39100 NZ_AP024166.1 Protein Homology CDS 1344048 1346108 . - 0 ID=cds-WP_221072266.1;Parent=gene-VA249_RS20590;Dbxref=Genbank:WP_221072266.1;Name=WP_221072266.1;Ontology_term=GO:0030980,GO:0051692,GO:0004556;gbkey=CDS;go_function=alpha-amylase activity|0004556||IEA;go_process=alpha-glucan catabolic process|0030980||IEA,cellular oligosaccharide catabolic process|0051692||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374841.1;locus_tag=VA249_RS20590;product=alpha-amylase;protein_id=WP_221072266.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1346376 1346990 . - . ID=gene-VA249_RS20595;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=VA249_RS20595;old_locus_tag=VYA_39110 NZ_AP024166.1 Protein Homology CDS 1346376 1346990 . - 0 ID=cds-WP_242598086.1;Parent=gene-VA249_RS20595;Dbxref=Genbank:WP_242598086.1;Name=WP_242598086.1;Ontology_term=GO:0009252,GO:0009274,GO:0016021;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,integral component of membrane|0016021||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020432586.1;locus_tag=VA249_RS20595;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_242598086.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1347194 1349422 . - . ID=gene-VA249_RS20600;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=VA249_RS20600;old_locus_tag=VYA_39120 NZ_AP024166.1 Protein Homology CDS 1347194 1349422 . - 0 ID=cds-WP_221070843.1;Parent=gene-VA249_RS20600;Dbxref=Genbank:WP_221070843.1;Name=WP_221070843.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189695.1;locus_tag=VA249_RS20600;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_221070843.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1349642 1351822 . - . ID=gene-VA249_RS20605;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=VA249_RS20605;old_locus_tag=VYA_39130 NZ_AP024166.1 Protein Homology CDS 1349642 1351822 . - 0 ID=cds-WP_128813387.1;Parent=gene-VA249_RS20605;Dbxref=Genbank:WP_128813387.1;Name=WP_128813387.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737745.1;locus_tag=VA249_RS20605;product=4-alpha-glucanotransferase;protein_id=WP_128813387.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1351937 1354390 . - . ID=gene-VA249_RS20610;Name=VA249_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20610;old_locus_tag=VYA_39140 NZ_AP024166.1 Protein Homology CDS 1351937 1354390 . - 0 ID=cds-WP_221070845.1;Parent=gene-VA249_RS20610;Dbxref=Genbank:WP_221070845.1;Name=WP_221070845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017061868.1;locus_tag=VA249_RS20610;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_221070845.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1354957 1357665 . + . ID=gene-VA249_RS20615;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=VA249_RS20615;old_locus_tag=VYA_39150 NZ_AP024166.1 Protein Homology CDS 1354957 1357665 . + 0 ID=cds-WP_221070847.1;Parent=gene-VA249_RS20615;Dbxref=Genbank:WP_221070847.1;Name=WP_221070847.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005480178.1;locus_tag=VA249_RS20615;product=HTH-type transcriptional regulator MalT;protein_id=WP_221070847.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1358336 1359253 . + . ID=gene-VA249_RS20620;Name=VA249_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20620;old_locus_tag=VYA_39160 NZ_AP024166.1 Protein Homology CDS 1358336 1359253 . + 0 ID=cds-WP_221070849.1;Parent=gene-VA249_RS20620;Dbxref=Genbank:WP_221070849.1;Name=WP_221070849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429253.1;locus_tag=VA249_RS20620;product=DUF368 domain-containing protein;protein_id=WP_221070849.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1359419 1359844 . + . ID=gene-VA249_RS20625;Name=VA249_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20625;old_locus_tag=VYA_39170 NZ_AP024166.1 Protein Homology CDS 1359419 1359844 . + 0 ID=cds-WP_221070851.1;Parent=gene-VA249_RS20625;Dbxref=Genbank:WP_221070851.1;Name=WP_221070851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429251.1;locus_tag=VA249_RS20625;product=hypothetical protein;protein_id=WP_221070851.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1359854 1360468 . + . ID=gene-VA249_RS20630;Name=VA249_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20630;old_locus_tag=VYA_39180 NZ_AP024166.1 Protein Homology CDS 1359854 1360468 . + 0 ID=cds-WP_221070853.1;Parent=gene-VA249_RS20630;Dbxref=Genbank:WP_221070853.1;Name=WP_221070853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447419.1;locus_tag=VA249_RS20630;product=SCO family protein;protein_id=WP_221070853.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1360455 1360922 . + . ID=gene-VA249_RS20635;Name=VA249_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20635;old_locus_tag=VYA_39190 NZ_AP024166.1 Protein Homology CDS 1360455 1360922 . + 0 ID=cds-WP_221070855.1;Parent=gene-VA249_RS20635;Dbxref=Genbank:WP_221070855.1;Name=WP_221070855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195405.1;locus_tag=VA249_RS20635;product=copper chaperone PCu(A)C;protein_id=WP_221070855.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1361044 1361358 . + . ID=gene-VA249_RS20640;Name=VA249_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20640;old_locus_tag=VYA_39200 NZ_AP024166.1 Protein Homology CDS 1361044 1361358 . + 0 ID=cds-WP_128813392.1;Parent=gene-VA249_RS20640;Dbxref=Genbank:WP_128813392.1;Name=WP_128813392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450608.1;locus_tag=VA249_RS20640;product=PTS glucose/sucrose transporter subunit IIB;protein_id=WP_128813392.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1361601 1362677 . + . ID=gene-VA249_RS20645;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=VA249_RS20645;old_locus_tag=VYA_39210 NZ_AP024166.1 Protein Homology CDS 1361601 1362677 . + 0 ID=cds-WP_221070858.1;Parent=gene-VA249_RS20645;Dbxref=Genbank:WP_221070858.1;Name=WP_221070858.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634467.1;locus_tag=VA249_RS20645;product=ribosome small subunit-dependent GTPase A;protein_id=WP_221070858.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1363193 1364413 . + . ID=gene-VA249_RS20650;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=VA249_RS20650;old_locus_tag=VYA_39220 NZ_AP024166.1 Protein Homology CDS 1363193 1364413 . + 0 ID=cds-WP_221070860.1;Parent=gene-VA249_RS20650;Dbxref=Genbank:WP_221070860.1;Name=WP_221070860.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016021;gbkey=CDS;gene=sstT;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005469142.1;locus_tag=VA249_RS20650;product=serine/threonine transporter SstT;protein_id=WP_221070860.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1364561 1365430 . - . ID=gene-VA249_RS20655;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=VA249_RS20655;old_locus_tag=VYA_39230 NZ_AP024166.1 Protein Homology CDS 1364561 1365430 . - 0 ID=cds-WP_221070861.1;Parent=gene-VA249_RS20655;Dbxref=Genbank:WP_221070861.1;Name=WP_221070861.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195608.1;locus_tag=VA249_RS20655;product=pyridoxal kinase PdxY;protein_id=WP_221070861.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1365538 1365720 . - . ID=gene-VA249_RS20660;Name=VA249_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20660;old_locus_tag=VYA_39240 NZ_AP024166.1 Protein Homology CDS 1365538 1365720 . - 0 ID=cds-WP_221070862.1;Parent=gene-VA249_RS20660;Dbxref=Genbank:WP_221070862.1;Name=WP_221070862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005447373.1;locus_tag=VA249_RS20660;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_221070862.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1365845 1367155 . - . ID=gene-VA249_RS20665;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=VA249_RS20665;old_locus_tag=VYA_39250 NZ_AP024166.1 Protein Homology CDS 1365845 1367155 . - 0 ID=cds-WP_221070863.1;Parent=gene-VA249_RS20665;Dbxref=Genbank:WP_221070863.1;Name=WP_221070863.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016021;gbkey=CDS;gene=potE;go_component=integral component of membrane|0016021||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017421711.1;locus_tag=VA249_RS20665;product=putrescine-ornithine antiporter;protein_id=WP_221070863.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1367219 1369399 . - . ID=gene-VA249_RS20670;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=VA249_RS20670;old_locus_tag=VYA_39260 NZ_AP024166.1 Protein Homology CDS 1367219 1369399 . - 0 ID=cds-WP_211918446.1;Parent=gene-VA249_RS20670;Dbxref=Genbank:WP_211918446.1;Name=WP_211918446.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082127.1;locus_tag=VA249_RS20670;product=ornithine decarboxylase SpeF;protein_id=WP_211918446.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1369833 1370279 . - . ID=gene-VA249_RS20675;Name=VA249_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20675;old_locus_tag=VYA_39270 NZ_AP024166.1 Protein Homology CDS 1369833 1370279 . - 0 ID=cds-WP_128813399.1;Parent=gene-VA249_RS20675;Dbxref=Genbank:WP_128813399.1;Name=WP_128813399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005458369.1;locus_tag=VA249_RS20675;product=helix-turn-helix transcriptional regulator;protein_id=WP_128813399.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1370917 1372101 . - . ID=gene-VA249_RS20680;Name=VA249_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20680;old_locus_tag=VYA_39280 NZ_AP024166.1 Protein Homology CDS 1370917 1372101 . - 0 ID=cds-WP_221070864.1;Parent=gene-VA249_RS20680;Dbxref=Genbank:WP_221070864.1;Name=WP_221070864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017421707.1;locus_tag=VA249_RS20680;product=sel1 repeat family protein;protein_id=WP_221070864.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1372622 1376263 . + . ID=gene-VA249_RS20685;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=VA249_RS20685;old_locus_tag=VYA_39290 NZ_AP024166.1 Protein Homology CDS 1372622 1376263 . + 0 ID=cds-WP_221070865.1;Parent=gene-VA249_RS20685;Dbxref=Genbank:WP_221070865.1;Name=WP_221070865.1;Ontology_term=GO:0005983,GO:0051678,GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;go_process=starch catabolic process|0005983||IEA,pullulan catabolic process|0051678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447180.1;locus_tag=VA249_RS20685;product=pullulanase-type alpha-1%2C6-glucosidase;protein_id=WP_221070865.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1376911 1377744 . - . ID=gene-VA249_RS20690;Name=VA249_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20690;old_locus_tag=VYA_39300 NZ_AP024166.1 Protein Homology CDS 1376911 1377744 . - 0 ID=cds-WP_221070866.1;Parent=gene-VA249_RS20690;Dbxref=Genbank:WP_221070866.1;Name=WP_221070866.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017057852.1;locus_tag=VA249_RS20690;product=MalM family protein;protein_id=WP_221070866.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1377902 1379164 . - . ID=gene-VA249_RS20695;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=VA249_RS20695;old_locus_tag=VYA_39310 NZ_AP024166.1 Protein Homology CDS 1377902 1379164 . - 0 ID=cds-WP_221070867.1;Parent=gene-VA249_RS20695;Dbxref=Genbank:WP_221070867.1;Name=WP_221070867.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757932.1;locus_tag=VA249_RS20695;product=maltoporin LamB;protein_id=WP_221070867.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1379609 1381564 . + . ID=gene-VA249_RS20700;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=VA249_RS20700;old_locus_tag=VYA_39320 NZ_AP024166.1 Protein Homology CDS 1379609 1381564 . + 0 ID=cds-WP_221070869.1;Parent=gene-VA249_RS20700;Dbxref=Genbank:WP_221070869.1;Name=WP_221070869.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450578.1;locus_tag=VA249_RS20700;product=glycogen debranching protein GlgX;protein_id=WP_221070869.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1381809 1383587 . + . ID=gene-VA249_RS20705;Name=VA249_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20705;old_locus_tag=VYA_39330 NZ_AP024166.1 Protein Homology CDS 1381809 1383587 . + 0 ID=cds-WP_221070877.1;Parent=gene-VA249_RS20705;Dbxref=Genbank:WP_221070877.1;Name=WP_221070877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706537.1;locus_tag=VA249_RS20705;product=diguanylate cyclase;protein_id=WP_221070877.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1383871 1384500 . + . ID=gene-VA249_RS20710;Name=VA249_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20710;old_locus_tag=VYA_39340 NZ_AP024166.1 Protein Homology CDS 1383871 1384500 . + 0 ID=cds-WP_221070878.1;Parent=gene-VA249_RS20710;Dbxref=Genbank:WP_221070878.1;Name=WP_221070878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195591.1;locus_tag=VA249_RS20710;product=recombinase family protein;protein_id=WP_221070878.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1384497 1385681 . + . ID=gene-VA249_RS20715;Name=VA249_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20715;old_locus_tag=VYA_39350 NZ_AP024166.1 Protein Homology CDS 1384497 1385681 . + 0 ID=cds-WP_221070879.1;Parent=gene-VA249_RS20715;Dbxref=Genbank:WP_221070879.1;Name=WP_221070879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006740826.1;locus_tag=VA249_RS20715;product=multidrug effflux MFS transporter;protein_id=WP_221070879.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1385788 1386222 . - . ID=gene-VA249_RS20720;Name=VA249_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20720;old_locus_tag=VYA_39360 NZ_AP024166.1 Protein Homology CDS 1385788 1386222 . - 0 ID=cds-WP_221070880.1;Parent=gene-VA249_RS20720;Dbxref=Genbank:WP_221070880.1;Name=WP_221070880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195588.1;locus_tag=VA249_RS20720;product=EamA family transporter;protein_id=WP_221070880.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1386320 1388356 . - . ID=gene-VA249_RS20725;Name=VA249_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20725;old_locus_tag=VYA_39370 NZ_AP024166.1 Protein Homology CDS 1386320 1388356 . - 0 ID=cds-WP_221070883.1;Parent=gene-VA249_RS20725;Dbxref=Genbank:WP_221070883.1;Name=WP_221070883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017629825.1;locus_tag=VA249_RS20725;product=TonB-dependent receptor;protein_id=WP_221070883.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1388494 1389432 . - . ID=gene-VA249_RS20730;Name=VA249_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20730;old_locus_tag=VYA_39380 NZ_AP024166.1 Protein Homology CDS 1388494 1389432 . - 0 ID=cds-WP_128813410.1;Parent=gene-VA249_RS20730;Dbxref=Genbank:WP_128813410.1;Name=WP_128813410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014235008.1;locus_tag=VA249_RS20730;product=LysR family transcriptional regulator;protein_id=WP_128813410.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1389667 1390587 . + . ID=gene-VA249_RS20735;Name=VA249_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20735;old_locus_tag=VYA_39390 NZ_AP024166.1 Protein Homology CDS 1389667 1390587 . + 0 ID=cds-WP_221070885.1;Parent=gene-VA249_RS20735;Dbxref=Genbank:WP_221070885.1;Name=WP_221070885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434328.1;locus_tag=VA249_RS20735;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_221070885.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1390679 1391635 . + . ID=gene-VA249_RS20740;Name=VA249_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20740;old_locus_tag=VYA_39400 NZ_AP024166.1 Protein Homology CDS 1390679 1391635 . + 0 ID=cds-WP_128813412.1;Parent=gene-VA249_RS20740;Dbxref=Genbank:WP_128813412.1;Name=WP_128813412.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449631.1;locus_tag=VA249_RS20740;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_128813412.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1391628 1392578 . + . ID=gene-VA249_RS20745;Name=VA249_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20745;old_locus_tag=VYA_39410 NZ_AP024166.1 Protein Homology CDS 1391628 1392578 . + 0 ID=cds-WP_128813413.1;Parent=gene-VA249_RS20745;Dbxref=Genbank:WP_128813413.1;Name=WP_128813413.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450557.1;locus_tag=VA249_RS20745;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_128813413.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1392590 1393351 . + . ID=gene-VA249_RS20750;Name=VA249_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20750;old_locus_tag=VYA_39420 NZ_AP024166.1 Protein Homology CDS 1392590 1393351 . + 0 ID=cds-WP_221070887.1;Parent=gene-VA249_RS20750;Dbxref=Genbank:WP_221070887.1;Name=WP_221070887.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014235012.1;locus_tag=VA249_RS20750;product=ATP-binding cassette domain-containing protein;protein_id=WP_221070887.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1393513 1394115 . + . ID=gene-VA249_RS20755;Name=VA249_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20755;old_locus_tag=VYA_39430 NZ_AP024166.1 Protein Homology CDS 1393513 1394115 . + 0 ID=cds-WP_221070889.1;Parent=gene-VA249_RS20755;Dbxref=Genbank:WP_221070889.1;Name=WP_221070889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005429172.1;locus_tag=VA249_RS20755;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221070889.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1394211 1395743 . - . ID=gene-VA249_RS20760;Name=VA249_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20760;old_locus_tag=VYA_39440 NZ_AP024166.1 Protein Homology CDS 1394211 1395743 . - 0 ID=cds-WP_221070891.1;Parent=gene-VA249_RS20760;Dbxref=Genbank:WP_221070891.1;Name=WP_221070891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434318.1;locus_tag=VA249_RS20760;product=MFS transporter;protein_id=WP_221070891.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1395749 1396762 . - . ID=gene-VA249_RS20765;Name=VA249_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20765;old_locus_tag=VYA_39450 NZ_AP024166.1 Protein Homology CDS 1395749 1396762 . - 0 ID=cds-WP_221070893.1;Parent=gene-VA249_RS20765;Dbxref=Genbank:WP_221070893.1;Name=WP_221070893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009695908.1;locus_tag=VA249_RS20765;product=HlyD family secretion protein;protein_id=WP_221070893.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1397095 1397481 . + . ID=gene-VA249_RS20770;Name=VA249_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20770;old_locus_tag=VYA_39460 NZ_AP024166.1 Protein Homology CDS 1397095 1397481 . + 0 ID=cds-WP_128813418.1;Parent=gene-VA249_RS20770;Dbxref=Genbank:WP_128813418.1;Name=WP_128813418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449637.1;locus_tag=VA249_RS20770;product=DUF2541 family protein;protein_id=WP_128813418.1;transl_table=11 NZ_AP024166.1 RefSeq pseudogene 1397619 1397742 . - . ID=gene-VA249_RS24155;Name=VA249_RS24155;end_range=1397742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24155;partial=true;pseudo=true;start_range=.,1397619 NZ_AP024166.1 Protein Homology CDS 1397619 1397742 . - 0 ID=cds-VA249_RS24155;Parent=gene-VA249_RS24155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1397742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118343.1;locus_tag=VA249_RS24155;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1397619;transl_table=11 NZ_AP024166.1 RefSeq gene 1398023 1399531 . + . ID=gene-VA249_RS20775;Name=VA249_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20775;old_locus_tag=VYA_39470 NZ_AP024166.1 Protein Homology CDS 1398023 1399531 . + 0 ID=cds-WP_221070895.1;Parent=gene-VA249_RS20775;Dbxref=Genbank:WP_221070895.1;Name=WP_221070895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704349.1;locus_tag=VA249_RS20775;product=DUF3360 family protein;protein_id=WP_221070895.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1400144 1401046 . + . ID=gene-VA249_RS20780;Name=VA249_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20780;old_locus_tag=VYA_39480 NZ_AP024166.1 Protein Homology CDS 1400144 1401046 . + 0 ID=cds-WP_221070897.1;Parent=gene-VA249_RS20780;Dbxref=Genbank:WP_221070897.1;Name=WP_221070897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229927.1;locus_tag=VA249_RS20780;product=LysR substrate-binding domain-containing protein;protein_id=WP_221070897.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1401391 1402053 . + . ID=gene-VA249_RS20785;Name=VA249_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20785;old_locus_tag=VYA_39490 NZ_AP024166.1 Protein Homology CDS 1401391 1402053 . + 0 ID=cds-WP_065546087.1;Parent=gene-VA249_RS20785;Dbxref=Genbank:WP_065546087.1;Name=WP_065546087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229928.1;locus_tag=VA249_RS20785;product=cysteine hydrolase;protein_id=WP_065546087.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1402068 1402940 . + . ID=gene-VA249_RS20790;Name=VA249_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20790;old_locus_tag=VYA_39500 NZ_AP024166.1 Protein Homology CDS 1402068 1402940 . + 0 ID=cds-WP_221070899.1;Parent=gene-VA249_RS20790;Dbxref=Genbank:WP_221070899.1;Name=WP_221070899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022834.2;locus_tag=VA249_RS20790;product=DUF2877 domain-containing protein;protein_id=WP_221070899.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1403004 1404548 . + . ID=gene-VA249_RS20795;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=VA249_RS20795;old_locus_tag=VYA_39510 NZ_AP024166.1 Protein Homology CDS 1403004 1404548 . + 0 ID=cds-WP_225927135.1;Parent=gene-VA249_RS20795;Dbxref=Genbank:WP_225927135.1;Name=WP_225927135.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229930.1;locus_tag=VA249_RS20795;product=acyl-CoA synthetase FdrA;protein_id=WP_225927135.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1404560 1405987 . + . ID=gene-VA249_RS20800;Name=VA249_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20800;old_locus_tag=VYA_39520 NZ_AP024166.1 Protein Homology CDS 1404560 1405987 . + 0 ID=cds-WP_221070903.1;Parent=gene-VA249_RS20800;Dbxref=Genbank:WP_221070903.1;Name=WP_221070903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229931.1;locus_tag=VA249_RS20800;product=DUF1116 domain-containing protein;protein_id=WP_221070903.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1405984 1406934 . + . ID=gene-VA249_RS20805;Name=VA249_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20805;old_locus_tag=VYA_39530 NZ_AP024166.1 Protein Homology CDS 1405984 1406934 . + 0 ID=cds-WP_221070905.1;Parent=gene-VA249_RS20805;Dbxref=Genbank:WP_221070905.1;Name=WP_221070905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229932.1;locus_tag=VA249_RS20805;product=carbamate kinase;protein_id=WP_221070905.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1406978 1407367 . + . ID=gene-VA249_RS20810;Name=VA249_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20810;old_locus_tag=VYA_39540 NZ_AP024166.1 Protein Homology CDS 1406978 1407367 . + 0 ID=cds-WP_221070907.1;Parent=gene-VA249_RS20810;Dbxref=Genbank:WP_221070907.1;Name=WP_221070907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229933.1;locus_tag=VA249_RS20810;product=glutamyl-tRNA amidotransferase;protein_id=WP_221070907.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1407470 1408717 . + . ID=gene-VA249_RS20815;Name=VA249_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20815;old_locus_tag=VYA_39550 NZ_AP024166.1 Protein Homology CDS 1407470 1408717 . + 0 ID=cds-WP_221070910.1;Parent=gene-VA249_RS20815;Dbxref=Genbank:WP_221070910.1;Name=WP_221070910.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006229934.1;locus_tag=VA249_RS20815;product=cytosine permease;protein_id=WP_221070910.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1409224 1409670 . - . ID=gene-VA249_RS20820;Name=VA249_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20820;old_locus_tag=VYA_39560 NZ_AP024166.1 Protein Homology CDS 1409224 1409670 . - 0 ID=cds-WP_221070912.1;Parent=gene-VA249_RS20820;Dbxref=Genbank:WP_221070912.1;Name=WP_221070912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005500060.1;locus_tag=VA249_RS20820;product=DUF302 domain-containing protein;protein_id=WP_221070912.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1409827 1411818 . + . ID=gene-VA249_RS20825;Name=VA249_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20825;old_locus_tag=VYA_39570 NZ_AP024166.1 Protein Homology CDS 1409827 1411818 . + 0 ID=cds-WP_221070914.1;Parent=gene-VA249_RS20825;Dbxref=Genbank:WP_221070914.1;Name=WP_221070914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189753.1;locus_tag=VA249_RS20825;product=U32 family peptidase;protein_id=WP_221070914.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1411863 1412249 . + . ID=gene-VA249_RS20830;Name=VA249_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20830;old_locus_tag=VYA_39580 NZ_AP024166.1 Protein Homology CDS 1411863 1412249 . + 0 ID=cds-WP_221070915.1;Parent=gene-VA249_RS20830;Dbxref=Genbank:WP_221070915.1;Name=WP_221070915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195574.1;locus_tag=VA249_RS20830;product=hypothetical protein;protein_id=WP_221070915.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1412371 1412616 . + . ID=gene-VA249_RS20835;Name=VA249_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20835;old_locus_tag=VYA_39590 NZ_AP024166.1 Protein Homology CDS 1412371 1412616 . + 0 ID=cds-WP_128813426.1;Parent=gene-VA249_RS20835;Dbxref=Genbank:WP_128813426.1;Name=WP_128813426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008074247.1;locus_tag=VA249_RS20835;product=DUF3297 family protein;protein_id=WP_128813426.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1412843 1413577 . + . ID=gene-VA249_RS20840;Name=VA249_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20840;old_locus_tag=VYA_39600 NZ_AP024166.1 Protein Homology CDS 1412843 1413577 . + 0 ID=cds-WP_221070916.1;Parent=gene-VA249_RS20840;Dbxref=Genbank:WP_221070916.1;Name=WP_221070916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016794514.1;locus_tag=VA249_RS20840;product=ABC transporter ATP-binding protein;protein_id=WP_221070916.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1413564 1416095 . + . ID=gene-VA249_RS20845;Name=VA249_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20845;old_locus_tag=VYA_39610 NZ_AP024166.1 Protein Homology CDS 1413564 1416095 . + 0 ID=cds-WP_221070917.1;Parent=gene-VA249_RS20845;Dbxref=Genbank:WP_221070917.1;Name=WP_221070917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005395553.1;locus_tag=VA249_RS20845;product=ABC transporter permease;protein_id=WP_221070917.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1416095 1417219 . + . ID=gene-VA249_RS20850;Name=VA249_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20850;old_locus_tag=VYA_39620 NZ_AP024166.1 Protein Homology CDS 1416095 1417219 . + 0 ID=cds-WP_221070918.1;Parent=gene-VA249_RS20850;Dbxref=Genbank:WP_221070918.1;Name=WP_221070918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017634514.1;locus_tag=VA249_RS20850;product=carotenoid 1%2C2-hydratase;protein_id=WP_221070918.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1417316 1418179 . + . ID=gene-VA249_RS20855;Name=VA249_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20855;old_locus_tag=VYA_39630 NZ_AP024166.1 Protein Homology CDS 1417316 1418179 . + 0 ID=cds-WP_221070919.1;Parent=gene-VA249_RS20855;Dbxref=Genbank:WP_221070919.1;Name=WP_221070919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737452.1;locus_tag=VA249_RS20855;product=helix-turn-helix domain-containing protein;protein_id=WP_221070919.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1418263 1419615 . + . ID=gene-VA249_RS20860;Name=VA249_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20860;old_locus_tag=VYA_39640 NZ_AP024166.1 Protein Homology CDS 1418263 1419615 . + 0 ID=cds-WP_221070920.1;Parent=gene-VA249_RS20860;Dbxref=Genbank:WP_221070920.1;Name=WP_221070920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448925.1;locus_tag=VA249_RS20860;product=MATE family efflux transporter;protein_id=WP_221070920.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1419679 1419951 . + . ID=gene-VA249_RS20865;Name=VA249_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20865;old_locus_tag=VYA_39650 NZ_AP024166.1 Protein Homology CDS 1419679 1419951 . + 0 ID=cds-WP_221070921.1;Parent=gene-VA249_RS20865;Dbxref=Genbank:WP_221070921.1;Name=WP_221070921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448923.1;locus_tag=VA249_RS20865;product=DUF2999 family protein;protein_id=WP_221070921.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1420224 1420781 . + . ID=gene-VA249_RS20870;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=VA249_RS20870;old_locus_tag=VYA_39660 NZ_AP024166.1 Protein Homology CDS 1420224 1420781 . + 0 ID=cds-WP_128813433.1;Parent=gene-VA249_RS20870;Dbxref=Genbank:WP_128813433.1;Name=WP_128813433.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017629768.1;locus_tag=VA249_RS20870;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_128813433.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1420943 1422511 . + . ID=gene-VA249_RS20875;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=VA249_RS20875;old_locus_tag=VYA_39670 NZ_AP024166.1 Protein Homology CDS 1420943 1422511 . + 0 ID=cds-WP_221070925.1;Parent=gene-VA249_RS20875;Dbxref=Genbank:WP_221070925.1;Name=WP_221070925.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460414.1;locus_tag=VA249_RS20875;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_221070925.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1423086 1423298 . - . ID=gene-VA249_RS20880;Name=VA249_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20880;old_locus_tag=VYA_39680 NZ_AP024166.1 Protein Homology CDS 1423086 1423298 . - 0 ID=cds-WP_128813435.1;Parent=gene-VA249_RS20880;Dbxref=Genbank:WP_128813435.1;Name=WP_128813435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735656.1;locus_tag=VA249_RS20880;product=cold-shock protein;protein_id=WP_128813435.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1423751 1425157 . - . ID=gene-VA249_RS20885;Name=VA249_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20885;old_locus_tag=VYA_39690 NZ_AP024166.1 Protein Homology CDS 1423751 1425157 . - 0 ID=cds-WP_221070942.1;Parent=gene-VA249_RS20885;Dbxref=Genbank:WP_221070942.1;Name=WP_221070942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006741391.1;locus_tag=VA249_RS20885;product=aspartate aminotransferase family protein;protein_id=WP_221070942.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1425404 1425892 . - . ID=gene-VA249_RS20890;Name=VA249_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20890;old_locus_tag=VYA_39700 NZ_AP024166.1 Protein Homology CDS 1425404 1425892 . - 0 ID=cds-WP_221070943.1;Parent=gene-VA249_RS20890;Dbxref=Genbank:WP_221070943.1;Name=WP_221070943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005502420.1;locus_tag=VA249_RS20890;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_221070943.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1425954 1427141 . - . ID=gene-VA249_RS20895;Name=doeA;gbkey=Gene;gene=doeA;gene_biotype=protein_coding;locus_tag=VA249_RS20895;old_locus_tag=VYA_39710 NZ_AP024166.1 Protein Homology CDS 1425954 1427141 . - 0 ID=cds-WP_128813438.1;Parent=gene-VA249_RS20895;Dbxref=Genbank:WP_128813438.1;Name=WP_128813438.1;Note=DoeA (degradation of ectoine A) is also called EutD (ectoine utilization D).;Ontology_term=GO:0042400;gbkey=CDS;gene=doeA;go_process=ectoine catabolic process|0042400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014233710.1;locus_tag=VA249_RS20895;product=ectoine hydrolase DoeA;protein_id=WP_128813438.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1427537 1428211 . - . ID=gene-VA249_RS20900;Name=VA249_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20900;old_locus_tag=VYA_39720 NZ_AP024166.1 Protein Homology CDS 1427537 1428211 . - 0 ID=cds-WP_221070945.1;Parent=gene-VA249_RS20900;Dbxref=Genbank:WP_221070945.1;Name=WP_221070945.1;Ontology_term=GO:0016429;gbkey=CDS;go_function=tRNA (adenine-N1-)-methyltransferase activity|0016429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006711624.1;locus_tag=VA249_RS20900;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;protein_id=WP_221070945.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1428360 1428680 . - . ID=gene-VA249_RS20905;Name=VA249_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20905;old_locus_tag=VYA_39730 NZ_AP024166.1 Protein Homology CDS 1428360 1428680 . - 0 ID=cds-WP_221070947.1;Parent=gene-VA249_RS20905;Dbxref=Genbank:WP_221070947.1;Name=WP_221070947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02595.1;locus_tag=VA249_RS20905;product=PEP-CTERM sorting domain-containing protein;protein_id=WP_221070947.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1429079 1429306 . + . ID=gene-VA249_RS20910;Name=VA249_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20910;old_locus_tag=VYA_39740 NZ_AP024166.1 Protein Homology CDS 1429079 1429306 . + 0 ID=cds-WP_221070949.1;Parent=gene-VA249_RS20910;Dbxref=Genbank:WP_221070949.1;Name=WP_221070949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449994.1;locus_tag=VA249_RS20910;product=hypothetical protein;protein_id=WP_221070949.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1429465 1430409 . - . ID=gene-VA249_RS20915;Name=VA249_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20915;old_locus_tag=VYA_39750 NZ_AP024166.1 Protein Homology CDS 1429465 1430409 . - 0 ID=cds-WP_221070951.1;Parent=gene-VA249_RS20915;Dbxref=Genbank:WP_221070951.1;Name=WP_221070951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=VA249_RS20915;product=AraC family transcriptional regulator;protein_id=WP_221070951.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1430507 1431679 . + . ID=gene-VA249_RS20920;Name=VA249_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20920;old_locus_tag=VYA_39760 NZ_AP024166.1 Protein Homology CDS 1430507 1431679 . + 0 ID=cds-WP_221070953.1;Parent=gene-VA249_RS20920;Dbxref=Genbank:WP_221070953.1;Name=WP_221070953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=VA249_RS20920;product=alpha/beta hydrolase;protein_id=WP_221070953.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1431981 1432049 . - . ID=gene-VA249_RS24205;Name=VA249_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24205 NZ_AP024166.1 Protein Homology CDS 1431981 1432049 . - 0 ID=cds-WP_242598087.1;Parent=gene-VA249_RS24205;Dbxref=Genbank:WP_242598087.1;Name=WP_242598087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012392.2;locus_tag=VA249_RS24205;product=hypothetical protein;protein_id=WP_242598087.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1432185 1432520 . - . ID=gene-VA249_RS20930;Name=VA249_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20930;old_locus_tag=VYA_39780 NZ_AP024166.1 GeneMarkS-2+ CDS 1432185 1432520 . - 0 ID=cds-WP_221070955.1;Parent=gene-VA249_RS20930;Dbxref=Genbank:WP_221070955.1;Name=WP_221070955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS20930;product=hypothetical protein;protein_id=WP_221070955.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1432697 1432972 . + . ID=gene-VA249_RS20935;Name=VA249_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20935;old_locus_tag=VYA_39790 NZ_AP024166.1 GeneMarkS-2+ CDS 1432697 1432972 . + 0 ID=cds-WP_221070956.1;Parent=gene-VA249_RS20935;Dbxref=Genbank:WP_221070956.1;Name=WP_221070956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS20935;product=hypothetical protein;protein_id=WP_221070956.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1432973 1433218 . - . ID=gene-VA249_RS20940;Name=VA249_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20940;old_locus_tag=VYA_39800 NZ_AP024166.1 GeneMarkS-2+ CDS 1432973 1433218 . - 0 ID=cds-WP_221070958.1;Parent=gene-VA249_RS20940;Dbxref=Genbank:WP_221070958.1;Name=WP_221070958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS20940;product=hypothetical protein;protein_id=WP_221070958.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1433450 1434058 . + . ID=gene-VA249_RS20945;Name=VA249_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20945;old_locus_tag=VYA_39810 NZ_AP024166.1 GeneMarkS-2+ CDS 1433450 1434058 . + 0 ID=cds-WP_221070960.1;Parent=gene-VA249_RS20945;Dbxref=Genbank:WP_221070960.1;Name=WP_221070960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS20945;product=hypothetical protein;protein_id=WP_221070960.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1434174 1435274 . - . ID=gene-VA249_RS20950;Name=VA249_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20950;old_locus_tag=VYA_39820 NZ_AP024166.1 Protein Homology CDS 1434174 1435274 . - 0 ID=cds-WP_221070962.1;Parent=gene-VA249_RS20950;Dbxref=Genbank:WP_221070962.1;Name=WP_221070962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005366868.1;locus_tag=VA249_RS20950;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_221070962.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1435819 1436013 . - . ID=gene-VA249_RS24160;Name=VA249_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24160;old_locus_tag=VYA_39830 NZ_AP024166.1 Protein Homology CDS 1435819 1436013 . - 0 ID=cds-WP_225927136.1;Parent=gene-VA249_RS24160;Dbxref=Genbank:WP_225927136.1;Name=WP_225927136.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=VA249_RS24160;product=helix-turn-helix domain-containing protein;protein_id=WP_225927136.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1436083 1436301 . - . ID=gene-VA249_RS24165;Name=VA249_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24165;old_locus_tag=VYA_39840 NZ_AP024166.1 GeneMarkS-2+ CDS 1436083 1436301 . - 0 ID=cds-WP_225927137.1;Parent=gene-VA249_RS24165;Dbxref=Genbank:WP_225927137.1;Name=WP_225927137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS24165;product=hypothetical protein;protein_id=WP_225927137.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1436451 1437689 . - . ID=gene-VA249_RS20960;Name=VA249_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20960;old_locus_tag=VYA_39850 NZ_AP024166.1 Protein Homology CDS 1436451 1437689 . - 0 ID=cds-WP_221070964.1;Parent=gene-VA249_RS20960;Dbxref=Genbank:WP_221070964.1;Name=WP_221070964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001885261.1;locus_tag=VA249_RS20960;product=DEAD/DEAH box helicase;protein_id=WP_221070964.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1437820 1438362 . - . ID=gene-VA249_RS20965;Name=VA249_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20965;old_locus_tag=VYA_39860 NZ_AP024166.1 Protein Homology CDS 1437820 1438362 . - 0 ID=cds-WP_221070966.1;Parent=gene-VA249_RS20965;Dbxref=Genbank:WP_221070966.1;Name=WP_221070966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818272.1;locus_tag=VA249_RS20965;product=AhpC/TSA family protein;protein_id=WP_221070966.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1438376 1439461 . - . ID=gene-VA249_RS20970;Name=VA249_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20970;old_locus_tag=VYA_39870 NZ_AP024166.1 Protein Homology CDS 1438376 1439461 . - 0 ID=cds-WP_221070968.1;Parent=gene-VA249_RS20970;Dbxref=Genbank:WP_221070968.1;Name=WP_221070968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019474.2;locus_tag=VA249_RS20970;product=alpha/beta hydrolase;protein_id=WP_221070968.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1439594 1440130 . - . ID=gene-VA249_RS20975;Name=VA249_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20975;old_locus_tag=VYA_39880 NZ_AP024166.1 Protein Homology CDS 1439594 1440130 . - 0 ID=cds-WP_221070969.1;Parent=gene-VA249_RS20975;Dbxref=Genbank:WP_221070969.1;Name=WP_221070969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195531.1;locus_tag=VA249_RS20975;product=nuclear transport factor 2 family protein;protein_id=WP_221070969.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1440279 1441166 . + . ID=gene-VA249_RS20980;Name=VA249_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20980;old_locus_tag=VYA_39890 NZ_AP024166.1 Protein Homology CDS 1440279 1441166 . + 0 ID=cds-WP_221070972.1;Parent=gene-VA249_RS20980;Dbxref=Genbank:WP_221070972.1;Name=WP_221070972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706636.1;locus_tag=VA249_RS20980;product=LysR substrate-binding domain-containing protein;protein_id=WP_221070972.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1441239 1442426 . - . ID=gene-VA249_RS20985;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=VA249_RS20985;old_locus_tag=VYA_39900 NZ_AP024166.1 Protein Homology CDS 1441239 1442426 . - 0 ID=cds-WP_221070974.1;Parent=gene-VA249_RS20985;Dbxref=Genbank:WP_221070974.1;Name=WP_221070974.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011221864.1;locus_tag=VA249_RS20985;product=mannonate dehydratase;protein_id=WP_221070974.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1442851 1444311 . + . ID=gene-VA249_RS20990;Name=VA249_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS20990;old_locus_tag=VYA_39910 NZ_AP024166.1 Protein Homology CDS 1442851 1444311 . + 0 ID=cds-WP_221070976.1;Parent=gene-VA249_RS20990;Dbxref=Genbank:WP_221070976.1;Name=WP_221070976.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006228493.1;locus_tag=VA249_RS20990;product=fructuronate reductase;protein_id=WP_221070976.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1444362 1445783 . + . ID=gene-VA249_RS20995;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=VA249_RS20995;old_locus_tag=VYA_39920 NZ_AP024166.1 Protein Homology CDS 1444362 1445783 . + 0 ID=cds-WP_221070978.1;Parent=gene-VA249_RS20995;Dbxref=Genbank:WP_221070978.1;Name=WP_221070978.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385923.1;locus_tag=VA249_RS20995;product=glucuronate isomerase;protein_id=WP_221070978.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1445780 1446718 . + . ID=gene-VA249_RS21000;Name=VA249_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21000;old_locus_tag=VYA_39930 NZ_AP024166.1 Protein Homology CDS 1445780 1446718 . + 0 ID=cds-WP_221070981.1;Parent=gene-VA249_RS21000;Dbxref=Genbank:WP_221070981.1;Name=WP_221070981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434159.1;locus_tag=VA249_RS21000;product=sugar kinase;protein_id=WP_221070981.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1446738 1447364 . + . ID=gene-VA249_RS21005;Name=VA249_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21005;old_locus_tag=VYA_39940 NZ_AP024166.1 Protein Homology CDS 1446738 1447364 . + 0 ID=cds-WP_221070983.1;Parent=gene-VA249_RS21005;Dbxref=Genbank:WP_221070983.1;Name=WP_221070983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434149.1;locus_tag=VA249_RS21005;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_221070983.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1447468 1448160 . + . ID=gene-VA249_RS21010;Name=VA249_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21010 NZ_AP024166.1 GeneMarkS-2+ CDS 1447468 1448160 . + 0 ID=cds-WP_221070985.1;Parent=gene-VA249_RS21010;Dbxref=Genbank:WP_221070985.1;Name=WP_221070985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21010;product=hypothetical protein;protein_id=WP_221070985.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1448275 1448655 . - . ID=gene-VA249_RS21015;Name=VA249_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21015;old_locus_tag=VYA_39950 NZ_AP024166.1 Protein Homology CDS 1448275 1448655 . - 0 ID=cds-WP_061896161.1;Parent=gene-VA249_RS21015;Dbxref=Genbank:WP_061896161.1;Name=WP_061896161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006228499.1;locus_tag=VA249_RS21015;product=hypothetical protein;protein_id=WP_061896161.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1448779 1450137 . - . ID=gene-VA249_RS21020;Name=VA249_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21020;old_locus_tag=VYA_39960 NZ_AP024166.1 Protein Homology CDS 1448779 1450137 . - 0 ID=cds-WP_221070993.1;Parent=gene-VA249_RS21020;Dbxref=Genbank:WP_221070993.1;Name=WP_221070993.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434143.1;locus_tag=VA249_RS21020;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_221070993.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1450591 1452429 . - . ID=gene-VA249_RS21025;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=VA249_RS21025;old_locus_tag=VYA_39970 NZ_AP024166.1 Protein Homology CDS 1450591 1452429 . - 0 ID=cds-WP_221070995.1;Parent=gene-VA249_RS21025;Dbxref=Genbank:WP_221070995.1;Name=WP_221070995.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434141.1;locus_tag=VA249_RS21025;product=beta-glucuronidase;protein_id=WP_221070995.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1452673 1453203 . + . ID=gene-VA249_RS21030;Name=VA249_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21030;old_locus_tag=VYA_39980 NZ_AP024166.1 Protein Homology CDS 1452673 1453203 . + 0 ID=cds-WP_221070997.1;Parent=gene-VA249_RS21030;Dbxref=Genbank:WP_221070997.1;Name=WP_221070997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006228498.1;locus_tag=VA249_RS21030;product=YgjV family protein;protein_id=WP_221070997.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1453205 1454011 . - . ID=gene-VA249_RS21035;Name=VA249_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21035;old_locus_tag=VYA_39990 NZ_AP024166.1 Protein Homology CDS 1453205 1454011 . - 0 ID=cds-WP_225923953.1;Parent=gene-VA249_RS21035;Dbxref=Genbank:WP_225923953.1;Name=WP_225923953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017007464.1;locus_tag=VA249_RS21035;product=FCD domain-containing protein;protein_id=WP_225923953.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1454375 1455682 . + . ID=gene-VA249_RS21040;Name=VA249_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21040;old_locus_tag=VYA_40000 NZ_AP024166.1 Protein Homology CDS 1454375 1455682 . + 0 ID=cds-WP_221070999.1;Parent=gene-VA249_RS21040;Dbxref=Genbank:WP_221070999.1;Name=WP_221070999.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: protein motif:HMM:NF015532.2;locus_tag=VA249_RS21040;product=OprD family outer membrane porin;protein_id=WP_221070999.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1455800 1456096 . + . ID=gene-VA249_RS21045;Name=VA249_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21045;old_locus_tag=VYA_40010 NZ_AP024166.1 GeneMarkS-2+ CDS 1455800 1456096 . + 0 ID=cds-WP_128813460.1;Parent=gene-VA249_RS21045;Dbxref=Genbank:WP_128813460.1;Name=WP_128813460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21045;product=hypothetical protein;protein_id=WP_128813460.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1456211 1457212 . - . ID=gene-VA249_RS21050;Name=VA249_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21050;old_locus_tag=VYA_40020 NZ_AP024166.1 Protein Homology CDS 1456211 1457212 . - 0 ID=cds-WP_221071001.1;Parent=gene-VA249_RS21050;Dbxref=Genbank:WP_221071001.1;Name=WP_221071001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313710.1;locus_tag=VA249_RS21050;product=arginine deiminase-related protein;protein_id=WP_221071001.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1457646 1459493 . + . ID=gene-VA249_RS21055;Name=VA249_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21055;old_locus_tag=VYA_40030 NZ_AP024166.1 Protein Homology CDS 1457646 1459493 . + 0 ID=cds-WP_211918329.1;Parent=gene-VA249_RS21055;Dbxref=Genbank:WP_211918329.1;Name=WP_211918329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453737.1;locus_tag=VA249_RS21055;product=ABC transporter ATP-binding protein/permease;protein_id=WP_211918329.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1460150 1460857 . + . ID=gene-VA249_RS21060;Name=VA249_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21060;old_locus_tag=VYA_40040 NZ_AP024166.1 Protein Homology CDS 1460150 1460857 . + 0 ID=cds-WP_221071003.1;Parent=gene-VA249_RS21060;Dbxref=Genbank:WP_221071003.1;Name=WP_221071003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644527.1;locus_tag=VA249_RS21060;product=DUF445 family protein;protein_id=WP_221071003.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1460979 1461455 . - . ID=gene-VA249_RS21065;Name=VA249_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21065;old_locus_tag=VYA_40050 NZ_AP024166.1 Protein Homology CDS 1460979 1461455 . - 0 ID=cds-WP_221071005.1;Parent=gene-VA249_RS21065;Dbxref=Genbank:WP_221071005.1;Name=WP_221071005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392170.1;locus_tag=VA249_RS21065;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_221071005.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1461777 1461944 . + . ID=gene-VA249_RS21070;Name=VA249_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21070;old_locus_tag=VYA_40060 NZ_AP024166.1 Protein Homology CDS 1461777 1461944 . + 0 ID=cds-WP_211918322.1;Parent=gene-VA249_RS21070;Dbxref=Genbank:WP_211918322.1;Name=WP_211918322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706656.1;locus_tag=VA249_RS21070;product=hypothetical protein;protein_id=WP_211918322.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1461951 1462199 . - . ID=gene-VA249_RS21075;Name=VA249_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21075;old_locus_tag=VYA_40070 NZ_AP024166.1 Protein Homology CDS 1461951 1462199 . - 0 ID=cds-WP_128813465.1;Parent=gene-VA249_RS21075;Dbxref=Genbank:WP_128813465.1;Name=WP_128813465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005449896.1;locus_tag=VA249_RS21075;product=hypothetical protein;protein_id=WP_128813465.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1462574 1463017 . + . ID=gene-VA249_RS21080;Name=VA249_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21080 NZ_AP024166.1 Protein Homology CDS 1462574 1463017 . + 0 ID=cds-WP_221071007.1;Parent=gene-VA249_RS21080;Dbxref=Genbank:WP_221071007.1;Name=WP_221071007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435775.1;locus_tag=VA249_RS21080;product=hypothetical protein;protein_id=WP_221071007.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1463121 1463360 . - . ID=gene-VA249_RS21085;Name=VA249_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21085;old_locus_tag=VYA_40080 NZ_AP024166.1 Protein Homology CDS 1463121 1463360 . - 0 ID=cds-WP_128813466.1;Parent=gene-VA249_RS21085;Dbxref=Genbank:WP_128813466.1;Name=WP_128813466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453495.1;locus_tag=VA249_RS21085;product=RNA-binding protein;protein_id=WP_128813466.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1463491 1464021 . + . ID=gene-VA249_RS21090;Name=VA249_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21090;old_locus_tag=VYA_40090 NZ_AP024166.1 Protein Homology CDS 1463491 1464021 . + 0 ID=cds-WP_221071008.1;Parent=gene-VA249_RS21090;Dbxref=Genbank:WP_221071008.1;Name=WP_221071008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706660.1;locus_tag=VA249_RS21090;product=GNAT family N-acetyltransferase;protein_id=WP_221071008.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1464065 1465558 . - . ID=gene-VA249_RS21095;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=VA249_RS21095;old_locus_tag=VYA_40100 NZ_AP024166.1 Protein Homology CDS 1464065 1465558 . - 0 ID=cds-WP_221071009.1;Parent=gene-VA249_RS21095;Dbxref=Genbank:WP_221071009.1;Name=WP_221071009.1;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428976.1;locus_tag=VA249_RS21095;product=sodium/proline symporter PutP;protein_id=WP_221071009.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1465696 1466403 . - . ID=gene-VA249_RS21100;Name=VA249_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21100;old_locus_tag=VYA_40110 NZ_AP024166.1 Protein Homology CDS 1465696 1466403 . - 0 ID=cds-WP_221071010.1;Parent=gene-VA249_RS21100;Dbxref=Genbank:WP_221071010.1;Name=WP_221071010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736898.1;locus_tag=VA249_RS21100;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=WP_221071010.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1466415 1469561 . - . ID=gene-VA249_RS21105;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=VA249_RS21105;old_locus_tag=VYA_40120 NZ_AP024166.1 Protein Homology CDS 1466415 1469561 . - 0 ID=cds-WP_221071011.1;Parent=gene-VA249_RS21105;Dbxref=Genbank:WP_221071011.1;Name=WP_221071011.1;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820065.1;locus_tag=VA249_RS21105;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_221071011.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1469992 1470804 . - . ID=gene-VA249_RS21110;Name=VA249_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21110;old_locus_tag=VYA_40130 NZ_AP024166.1 Protein Homology CDS 1469992 1470804 . - 0 ID=cds-WP_221071012.1;Parent=gene-VA249_RS21110;Dbxref=Genbank:WP_221071012.1;Name=WP_221071012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696507.1;locus_tag=VA249_RS21110;product=AraC family transcriptional regulator;protein_id=WP_221071012.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1471717 1472436 . + . ID=gene-VA249_RS21115;Name=VA249_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21115;old_locus_tag=VYA_40140 NZ_AP024166.1 Protein Homology CDS 1471717 1472436 . + 0 ID=cds-WP_221071013.1;Parent=gene-VA249_RS21115;Dbxref=Genbank:WP_221071013.1;Name=WP_221071013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017820063.1;locus_tag=VA249_RS21115;product=helix-turn-helix transcriptional regulator;protein_id=WP_221071013.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1472523 1473158 . - . ID=gene-VA249_RS21120;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=VA249_RS21120;old_locus_tag=VYA_40150 NZ_AP024166.1 Protein Homology CDS 1472523 1473158 . - 0 ID=cds-WP_221071014.1;Parent=gene-VA249_RS21120;Dbxref=Genbank:WP_221071014.1;Name=WP_221071014.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522748.1;locus_tag=VA249_RS21120;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_221071014.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1473326 1475173 . + . ID=gene-VA249_RS21125;Name=VA249_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21125;old_locus_tag=VYA_40160 NZ_AP024166.1 Protein Homology CDS 1473326 1475173 . + 0 ID=cds-WP_225927159.1;Parent=gene-VA249_RS21125;Dbxref=Genbank:WP_225927159.1;Name=WP_225927159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706673.1;locus_tag=VA249_RS21125;product=cache domain-containing protein;protein_id=WP_225927159.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1475166 1476392 . + . ID=gene-VA249_RS21130;Name=VA249_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21130;old_locus_tag=VYA_40170 NZ_AP024166.1 Protein Homology CDS 1475166 1476392 . + 0 ID=cds-WP_221071016.1;Parent=gene-VA249_RS21130;Dbxref=Genbank:WP_221071016.1;Name=WP_221071016.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696510.1;locus_tag=VA249_RS21130;product=response regulator;protein_id=WP_221071016.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1476502 1477893 . + . ID=gene-VA249_RS21135;Name=VA249_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21135;old_locus_tag=VYA_40180 NZ_AP024166.1 Protein Homology CDS 1476502 1477893 . + 0 ID=cds-WP_128813475.1;Parent=gene-VA249_RS21135;Dbxref=Genbank:WP_128813475.1;Name=WP_128813475.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017081323.1;locus_tag=VA249_RS21135;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_128813475.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1477988 1478671 . + . ID=gene-VA249_RS21140;Name=VA249_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21140;old_locus_tag=VYA_40190 NZ_AP024166.1 Protein Homology CDS 1477988 1478671 . + 0 ID=cds-WP_221071019.1;Parent=gene-VA249_RS21140;Dbxref=Genbank:WP_221071019.1;Name=WP_221071019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435812.1;locus_tag=VA249_RS21140;product=transglutaminase-like cysteine peptidase;protein_id=WP_221071019.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1478677 1480590 . + . ID=gene-VA249_RS21145;Name=VA249_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21145;old_locus_tag=VYA_40200 NZ_AP024166.1 Protein Homology CDS 1478677 1480590 . + 0 ID=cds-WP_221071021.1;Parent=gene-VA249_RS21145;Dbxref=Genbank:WP_221071021.1;Name=WP_221071021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453723.1;locus_tag=VA249_RS21145;product=EAL domain-containing protein;protein_id=WP_221071021.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1480605 1482719 . + . ID=gene-VA249_RS21150;Name=VA249_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21150;old_locus_tag=VYA_40210 NZ_AP024166.1 Protein Homology CDS 1480605 1482719 . + 0 ID=cds-WP_221071023.1;Parent=gene-VA249_RS21150;Dbxref=Genbank:WP_221071023.1;Name=WP_221071023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392130.1;locus_tag=VA249_RS21150;product=type I secretion system permease/ATPase;protein_id=WP_221071023.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1483127 1483726 . + . ID=gene-VA249_RS21155;Name=VA249_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21155;old_locus_tag=VYA_40220 NZ_AP024166.1 Protein Homology CDS 1483127 1483726 . + 0 ID=cds-WP_128813478.1;Parent=gene-VA249_RS21155;Dbxref=Genbank:WP_128813478.1;Name=WP_128813478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012842403.1;locus_tag=VA249_RS21155;product=mechanosensitive ion channel family protein;protein_id=WP_128813478.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1483791 1485416 . - . ID=gene-VA249_RS21160;Name=VA249_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21160;old_locus_tag=VYA_40230 NZ_AP024166.1 Protein Homology CDS 1483791 1485416 . - 0 ID=cds-WP_221071025.1;Parent=gene-VA249_RS21160;Dbxref=Genbank:WP_221071025.1;Name=WP_221071025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004732908.1;locus_tag=VA249_RS21160;product=peptide ABC transporter substrate-binding protein;protein_id=WP_221071025.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1485687 1486346 . + . ID=gene-VA249_RS21165;Name=VA249_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21165;old_locus_tag=VYA_40240 NZ_AP024166.1 Protein Homology CDS 1485687 1486346 . + 0 ID=cds-WP_221071027.1;Parent=gene-VA249_RS21165;Dbxref=Genbank:WP_221071027.1;Name=WP_221071027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025635165.1;locus_tag=VA249_RS21165;product=CatB-related O-acetyltransferase;protein_id=WP_221071027.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1486433 1488109 . - . ID=gene-VA249_RS21170;Name=VA249_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21170;old_locus_tag=VYA_40250 NZ_AP024166.1 Protein Homology CDS 1486433 1488109 . - 0 ID=cds-WP_221071029.1;Parent=gene-VA249_RS21170;Dbxref=Genbank:WP_221071029.1;Name=WP_221071029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082051.1;locus_tag=VA249_RS21170;product=FapA family protein;protein_id=WP_221071029.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1488527 1490548 . - . ID=gene-VA249_RS21175;Name=VA249_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21175;old_locus_tag=VYA_40260 NZ_AP024166.1 Protein Homology CDS 1488527 1490548 . - 0 ID=cds-WP_221071031.1;Parent=gene-VA249_RS21175;Dbxref=Genbank:WP_221071031.1;Name=WP_221071031.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197818.1;locus_tag=VA249_RS21175;product=GNAT family N-acetyltransferase;protein_id=WP_221071031.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1490703 1491677 . - . ID=gene-VA249_RS21180;Name=VA249_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21180;old_locus_tag=VYA_40270 NZ_AP024166.1 Protein Homology CDS 1490703 1491677 . - 0 ID=cds-WP_128813481.1;Parent=gene-VA249_RS21180;Dbxref=Genbank:WP_128813481.1;Name=WP_128813481.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008074113.1;locus_tag=VA249_RS21180;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_128813481.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1491685 1492902 . - . ID=gene-VA249_RS21185;Name=VA249_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21185;old_locus_tag=VYA_40280 NZ_AP024166.1 Protein Homology CDS 1491685 1492902 . - 0 ID=cds-WP_128813482.1;Parent=gene-VA249_RS21185;Dbxref=Genbank:WP_128813482.1;Name=WP_128813482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004412853.1;locus_tag=VA249_RS21185;product=AAA family ATPase;protein_id=WP_128813482.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1494144 1496114 . + . ID=gene-VA249_RS21190;Name=VA249_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21190;old_locus_tag=VYA_40290 NZ_AP024166.1 Protein Homology CDS 1494144 1496114 . + 0 ID=cds-WP_221071033.1;Parent=gene-VA249_RS21190;Dbxref=Genbank:WP_221071033.1;Name=WP_221071033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130354.1;locus_tag=VA249_RS21190;product=DUF3346 domain-containing protein;protein_id=WP_221071033.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1496437 1496904 . - . ID=gene-VA249_RS21195;Name=VA249_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21195 NZ_AP024166.1 Protein Homology CDS 1496437 1496904 . - 0 ID=cds-WP_221071035.1;Parent=gene-VA249_RS21195;Dbxref=Genbank:WP_221071035.1;Name=WP_221071035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428907.1;locus_tag=VA249_RS21195;product=transcriptional regulator;protein_id=WP_221071035.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1497367 1497564 . + . ID=gene-VA249_RS21200;Name=VA249_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21200;old_locus_tag=VYA_40300 NZ_AP024166.1 Protein Homology CDS 1497367 1497564 . + 0 ID=cds-WP_128812352.1;Parent=gene-VA249_RS21200;Dbxref=Genbank:WP_128812352.1;Name=WP_128812352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004736928.1;locus_tag=VA249_RS21200;product=hypothetical protein;protein_id=WP_128812352.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1497792 1498001 . + . ID=gene-VA249_RS21205;Name=VA249_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21205;old_locus_tag=VYA_40310 NZ_AP024166.1 Protein Homology CDS 1497792 1498001 . + 0 ID=cds-WP_128812353.1;Parent=gene-VA249_RS21205;Dbxref=Genbank:WP_128812353.1;Name=WP_128812353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374484.1;locus_tag=VA249_RS21205;product=DUF3283 family protein;protein_id=WP_128812353.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1498139 1498855 . + . ID=gene-VA249_RS21210;Name=VA249_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21210;old_locus_tag=VYA_40320 NZ_AP024166.1 Protein Homology CDS 1498139 1498855 . + 0 ID=cds-WP_211918280.1;Parent=gene-VA249_RS21210;Dbxref=Genbank:WP_211918280.1;Name=WP_211918280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464874.1;locus_tag=VA249_RS21210;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_211918280.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1498938 1500020 . - . ID=gene-VA249_RS21215;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=VA249_RS21215;old_locus_tag=VYA_40330 NZ_AP024166.1 Protein Homology CDS 1498938 1500020 . - 0 ID=cds-WP_221071036.1;Parent=gene-VA249_RS21215;Dbxref=Genbank:WP_221071036.1;Name=WP_221071036.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130346.1;locus_tag=VA249_RS21215;product=rod shape-determining protein RodA;protein_id=WP_221071036.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1500333 1501334 . - . ID=gene-VA249_RS21220;Name=VA249_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21220;old_locus_tag=VYA_40340 NZ_AP024166.1 Protein Homology CDS 1500333 1501334 . - 0 ID=cds-WP_221071038.1;Parent=gene-VA249_RS21220;Dbxref=Genbank:WP_221071038.1;Name=WP_221071038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428882.1;locus_tag=VA249_RS21220;product=DUF2955 domain-containing protein;protein_id=WP_221071038.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1501345 1502394 . - . ID=gene-VA249_RS21225;Name=VA249_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21225;old_locus_tag=VYA_40350 NZ_AP024166.1 Protein Homology CDS 1501345 1502394 . - 0 ID=cds-WP_039973872.1;Parent=gene-VA249_RS21225;Dbxref=Genbank:WP_039973872.1;Name=WP_039973872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197811.1;locus_tag=VA249_RS21225;product=HlyD family secretion protein;protein_id=WP_039973872.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1502514 1503434 . + . ID=gene-VA249_RS21230;Name=VA249_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21230;old_locus_tag=VYA_40360 NZ_AP024166.1 Protein Homology CDS 1502514 1503434 . + 0 ID=cds-WP_221071040.1;Parent=gene-VA249_RS21230;Dbxref=Genbank:WP_221071040.1;Name=WP_221071040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448868.1;locus_tag=VA249_RS21230;product=LysR family transcriptional regulator;protein_id=WP_221071040.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1503519 1504187 . + . ID=gene-VA249_RS21235;Name=VA249_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21235;old_locus_tag=VYA_40370 NZ_AP024166.1 Protein Homology CDS 1503519 1504187 . + 0 ID=cds-WP_215810132.1;Parent=gene-VA249_RS21235;Dbxref=Genbank:WP_215810132.1;Name=WP_215810132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189795.1;locus_tag=VA249_RS21235;product=hypothetical protein;protein_id=WP_215810132.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1504197 1504895 . + . ID=gene-VA249_RS21240;Name=VA249_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21240;old_locus_tag=VYA_40380 NZ_AP024166.1 Protein Homology CDS 1504197 1504895 . + 0 ID=cds-WP_010453674.1;Parent=gene-VA249_RS21240;Dbxref=Genbank:WP_010453674.1;Name=WP_010453674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392078.1;locus_tag=VA249_RS21240;product=ABC transporter ATP-binding protein;protein_id=WP_010453674.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1504883 1506151 . + . ID=gene-VA249_RS21245;Name=VA249_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21245;old_locus_tag=VYA_40390 NZ_AP024166.1 Protein Homology CDS 1504883 1506151 . + 0 ID=cds-WP_221071042.1;Parent=gene-VA249_RS21245;Dbxref=Genbank:WP_221071042.1;Name=WP_221071042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335052.1;locus_tag=VA249_RS21245;product=ABC transporter permease;protein_id=WP_221071042.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1506144 1506929 . + . ID=gene-VA249_RS21250;Name=VA249_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21250;old_locus_tag=VYA_40400 NZ_AP024166.1 Protein Homology CDS 1506144 1506929 . + 0 ID=cds-WP_221071045.1;Parent=gene-VA249_RS21250;Dbxref=Genbank:WP_221071045.1;Name=WP_221071045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130339.1;locus_tag=VA249_RS21250;product=outer membrane lipoprotein-sorting protein;protein_id=WP_221071045.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1506975 1508321 . + . ID=gene-VA249_RS21255;Name=VA249_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21255;old_locus_tag=VYA_40410 NZ_AP024166.1 Protein Homology CDS 1506975 1508321 . + 0 ID=cds-WP_221071047.1;Parent=gene-VA249_RS21255;Dbxref=Genbank:WP_221071047.1;Name=WP_221071047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020197807.1;locus_tag=VA249_RS21255;product=hypothetical protein;protein_id=WP_221071047.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1508322 1509344 . + . ID=gene-VA249_RS21260;Name=VA249_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21260;old_locus_tag=VYA_40420 NZ_AP024166.1 Protein Homology CDS 1508322 1509344 . + 0 ID=cds-WP_221071049.1;Parent=gene-VA249_RS21260;Dbxref=Genbank:WP_221071049.1;Name=WP_221071049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374473.1;locus_tag=VA249_RS21260;product=sensor histidine kinase;protein_id=WP_221071049.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1509360 1510151 . + . ID=gene-VA249_RS21265;Name=VA249_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21265;old_locus_tag=VYA_40430 NZ_AP024166.1 Protein Homology CDS 1509360 1510151 . + 0 ID=cds-WP_221071051.1;Parent=gene-VA249_RS21265;Dbxref=Genbank:WP_221071051.1;Name=WP_221071051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015312739.1;locus_tag=VA249_RS21265;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_221071051.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1510220 1510855 . + . ID=gene-VA249_RS21270;Name=VA249_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21270;old_locus_tag=VYA_40440 NZ_AP024166.1 Protein Homology CDS 1510220 1510855 . + 0 ID=cds-WP_221071053.1;Parent=gene-VA249_RS21270;Dbxref=Genbank:WP_221071053.1;Name=WP_221071053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189790.1;locus_tag=VA249_RS21270;product=DUF2268 domain-containing putative Zn-dependent protease;protein_id=WP_221071053.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1510973 1511467 . - . ID=gene-VA249_RS21275;Name=VA249_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21275;old_locus_tag=VYA_40450 NZ_AP024166.1 Protein Homology CDS 1510973 1511467 . - 0 ID=cds-WP_005374458.1;Parent=gene-VA249_RS21275;Dbxref=Genbank:WP_005374458.1;Name=WP_005374458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706712.1;locus_tag=VA249_RS21275;product=peptidylprolyl isomerase;protein_id=WP_005374458.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1511623 1512744 . - . ID=gene-VA249_RS21280;Name=VA249_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21280;old_locus_tag=VYA_40460 NZ_AP024166.1 Protein Homology CDS 1511623 1512744 . - 0 ID=cds-WP_221071054.1;Parent=gene-VA249_RS21280;Dbxref=Genbank:WP_221071054.1;Name=WP_221071054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015316.2;locus_tag=VA249_RS21280;product=outer membrane protein transport protein;protein_id=WP_221071054.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1512882 1513760 . - . ID=gene-VA249_RS21285;Name=VA249_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21285;old_locus_tag=VYA_40470 NZ_AP024166.1 Protein Homology CDS 1512882 1513760 . - 0 ID=cds-WP_221072273.1;Parent=gene-VA249_RS21285;Dbxref=Genbank:WP_221072273.1;Name=WP_221072273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733542.1;locus_tag=VA249_RS21285;product=LysR family transcriptional regulator;protein_id=WP_221072273.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1513996 1515180 . + . ID=gene-VA249_RS21290;Name=VA249_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21290;old_locus_tag=VYA_40480 NZ_AP024166.1 Protein Homology CDS 1513996 1515180 . + 0 ID=cds-WP_221071056.1;Parent=gene-VA249_RS21290;Dbxref=Genbank:WP_221071056.1;Name=WP_221071056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017632214.1;locus_tag=VA249_RS21290;product=hypothetical protein;protein_id=WP_221071056.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1515349 1516101 . + . ID=gene-VA249_RS21295;Name=VA249_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21295;old_locus_tag=VYA_40490 NZ_AP024166.1 Protein Homology CDS 1515349 1516101 . + 0 ID=cds-WP_221071058.1;Parent=gene-VA249_RS21295;Dbxref=Genbank:WP_221071058.1;Name=WP_221071058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=VA249_RS21295;product=SDR family oxidoreductase;protein_id=WP_221071058.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1516220 1516522 . + . ID=gene-VA249_RS21300;Name=VA249_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21300;old_locus_tag=VYA_40500 NZ_AP024166.1 GeneMarkS-2+ CDS 1516220 1516522 . + 0 ID=cds-WP_221071059.1;Parent=gene-VA249_RS21300;Dbxref=Genbank:WP_221071059.1;Name=WP_221071059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21300;product=hypothetical protein;protein_id=WP_221071059.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1516665 1517417 . + . ID=gene-VA249_RS21305;Name=VA249_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21305;old_locus_tag=VYA_40510 NZ_AP024166.1 Protein Homology CDS 1516665 1517417 . + 0 ID=cds-WP_221071060.1;Parent=gene-VA249_RS21305;Dbxref=Genbank:WP_221071060.1;Name=WP_221071060.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017631302.1;locus_tag=VA249_RS21305;product=glucose 1-dehydrogenase;protein_id=WP_221071060.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1517488 1519113 . + . ID=gene-VA249_RS21310;Name=VA249_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21310;old_locus_tag=VYA_40520 NZ_AP024166.1 Protein Homology CDS 1517488 1519113 . + 0 ID=cds-WP_221071061.1;Parent=gene-VA249_RS21310;Dbxref=Genbank:WP_221071061.1;Name=WP_221071061.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017631303.1;locus_tag=VA249_RS21310;product=MFS transporter;protein_id=WP_221071061.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1519314 1519703 . - . ID=gene-VA249_RS21315;Name=VA249_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21315;old_locus_tag=VYA_40530 NZ_AP024166.1 Protein Homology CDS 1519314 1519703 . - 0 ID=cds-WP_221072275.1;Parent=gene-VA249_RS21315;Dbxref=Genbank:WP_221072275.1;Name=WP_221072275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195059.1;locus_tag=VA249_RS21315;product=DCC1-like thiol-disulfide oxidoreductase family protein;protein_id=WP_221072275.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1519742 1520515 . - . ID=gene-VA249_RS21320;Name=VA249_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21320;old_locus_tag=VYA_40540 NZ_AP024166.1 Protein Homology CDS 1519742 1520515 . - 0 ID=cds-WP_221071062.1;Parent=gene-VA249_RS21320;Dbxref=Genbank:WP_221071062.1;Name=WP_221071062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706715.1;locus_tag=VA249_RS21320;product=DUF4344 domain-containing metallopeptidase;protein_id=WP_221071062.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1520683 1521012 . - . ID=gene-VA249_RS21325;Name=VA249_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21325;old_locus_tag=VYA_40550 NZ_AP024166.1 Protein Homology CDS 1520683 1521012 . - 0 ID=cds-WP_221072276.1;Parent=gene-VA249_RS21325;Dbxref=Genbank:WP_221072276.1;Name=WP_221072276.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717569.1;locus_tag=VA249_RS21325;product=c-type cytochrome;protein_id=WP_221072276.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1521020 1521547 . - . ID=gene-VA249_RS21330;Name=VA249_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21330 NZ_AP024166.1 Protein Homology CDS 1521020 1521547 . - 0 ID=cds-WP_221071063.1;Parent=gene-VA249_RS21330;Dbxref=Genbank:WP_221071063.1;Name=WP_221071063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012314.2;locus_tag=VA249_RS21330;product=thioredoxin domain-containing protein;protein_id=WP_221071063.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1521553 1522128 . - . ID=gene-VA249_RS21335;Name=VA249_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21335;old_locus_tag=VYA_40580 NZ_AP024166.1 Protein Homology CDS 1521553 1522128 . - 0 ID=cds-WP_221071064.1;Parent=gene-VA249_RS21335;Dbxref=Genbank:WP_221071064.1;Name=WP_221071064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017190230.1;locus_tag=VA249_RS21335;product=SCO family protein;protein_id=WP_221071064.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1522137 1523237 . - . ID=gene-VA249_RS21340;Name=VA249_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21340;old_locus_tag=VYA_40590 NZ_AP024166.1 Protein Homology CDS 1522137 1523237 . - 0 ID=cds-WP_221071065.1;Parent=gene-VA249_RS21340;Dbxref=Genbank:WP_221071065.1;Name=WP_221071065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009697483.1;locus_tag=VA249_RS21340;product=WD40 repeat domain-containing protein;protein_id=WP_221071065.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1523309 1524985 . - . ID=gene-VA249_RS21345;Name=VA249_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21345;old_locus_tag=VYA_40600 NZ_AP024166.1 Protein Homology CDS 1523309 1524985 . - 0 ID=cds-WP_221071066.1;Parent=gene-VA249_RS21345;Dbxref=Genbank:WP_221071066.1;Name=WP_221071066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714265.1;locus_tag=VA249_RS21345;product=cytochrome c;protein_id=WP_221071066.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1524978 1525604 . - . ID=gene-VA249_RS21350;Name=VA249_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21350;old_locus_tag=VYA_40610 NZ_AP024166.1 Protein Homology CDS 1524978 1525604 . - 0 ID=cds-WP_221071067.1;Parent=gene-VA249_RS21350;Dbxref=Genbank:WP_221071067.1;Name=WP_221071067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000645350.1;locus_tag=VA249_RS21350;product=NapC/NirT family cytochrome c;protein_id=WP_221071067.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1525601 1526074 . - . ID=gene-VA249_RS21355;Name=VA249_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21355;old_locus_tag=VYA_40620 NZ_AP024166.1 Protein Homology CDS 1525601 1526074 . - 0 ID=cds-WP_221071069.1;Parent=gene-VA249_RS21355;Dbxref=Genbank:WP_221071069.1;Name=WP_221071069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831560.1;locus_tag=VA249_RS21355;product=copper chaperone PCu(A)C;protein_id=WP_221071069.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1526096 1527088 . - . ID=gene-VA249_RS21360;Name=VA249_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21360;old_locus_tag=VYA_40630 NZ_AP024166.1 Protein Homology CDS 1526096 1527088 . - 0 ID=cds-WP_221071072.1;Parent=gene-VA249_RS21360;Dbxref=Genbank:WP_221071072.1;Name=WP_221071072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751012.1;locus_tag=VA249_RS21360;product=porin;protein_id=WP_221071072.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1527370 1528329 . + . ID=gene-VA249_RS21365;Name=VA249_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21365;old_locus_tag=VYA_40640 NZ_AP024166.1 Protein Homology CDS 1527370 1528329 . + 0 ID=cds-WP_221071074.1;Parent=gene-VA249_RS21365;Dbxref=Genbank:WP_221071074.1;Name=WP_221071074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005509038.1;locus_tag=VA249_RS21365;product=LysR family transcriptional regulator;protein_id=WP_221071074.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1528647 1529633 . + . ID=gene-VA249_RS21370;Name=VA249_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21370;old_locus_tag=VYA_40650 NZ_AP024166.1 Protein Homology CDS 1528647 1529633 . + 0 ID=cds-WP_221071076.1;Parent=gene-VA249_RS21370;Dbxref=Genbank:WP_221071076.1;Name=WP_221071076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006957500.1;locus_tag=VA249_RS21370;product=DUF2860 domain-containing protein;protein_id=WP_221071076.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1530371 1531606 . + . ID=gene-VA249_RS21375;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=VA249_RS21375;old_locus_tag=VYA_40660 NZ_AP024166.1 Protein Homology CDS 1530371 1531606 . + 0 ID=cds-WP_128812373.1;Parent=gene-VA249_RS21375;Dbxref=Genbank:WP_128812373.1;Name=WP_128812373.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004743913.1;locus_tag=VA249_RS21375;product=sodium/glutamate symporter;protein_id=WP_128812373.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1531694 1532524 . - . ID=gene-VA249_RS21380;Name=VA249_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21380;old_locus_tag=VYA_40670 NZ_AP024166.1 Protein Homology CDS 1531694 1532524 . - 0 ID=cds-WP_221071078.1;Parent=gene-VA249_RS21380;Dbxref=Genbank:WP_221071078.1;Name=WP_221071078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448888.1;locus_tag=VA249_RS21380;product=hypothetical protein;protein_id=WP_221071078.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1532524 1533384 . - . ID=gene-VA249_RS21385;Name=VA249_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21385;old_locus_tag=VYA_40680 NZ_AP024166.1 Protein Homology CDS 1532524 1533384 . - 0 ID=cds-WP_221071080.1;Parent=gene-VA249_RS21385;Dbxref=Genbank:WP_221071080.1;Name=WP_221071080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016960024.1;locus_tag=VA249_RS21385;product=ABC transporter ATP-binding protein;protein_id=WP_221071080.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1533973 1535199 . + . ID=gene-VA249_RS21390;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=VA249_RS21390;old_locus_tag=VYA_40690 NZ_AP024166.1 Protein Homology CDS 1533973 1535199 . + 0 ID=cds-WP_221071082.1;Parent=gene-VA249_RS21390;Dbxref=Genbank:WP_221071082.1;Name=WP_221071082.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428834.1;locus_tag=VA249_RS21390;product=sodium/glutamate symporter;protein_id=WP_221071082.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1535410 1536276 . + . ID=gene-VA249_RS21395;Name=VA249_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21395;old_locus_tag=VYA_40700 NZ_AP024166.1 Protein Homology CDS 1535410 1536276 . + 0 ID=cds-WP_221071084.1;Parent=gene-VA249_RS21395;Dbxref=Genbank:WP_221071084.1;Name=WP_221071084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010644380.1;locus_tag=VA249_RS21395;product=glycerol kinase;protein_id=WP_221071084.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1536395 1537195 . - . ID=gene-VA249_RS21400;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=VA249_RS21400;old_locus_tag=VYA_40710 NZ_AP024166.1 Protein Homology CDS 1536395 1537195 . - 0 ID=cds-WP_128812413.1;Parent=gene-VA249_RS21400;Dbxref=Genbank:WP_128812413.1;Name=WP_128812413.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237047.1;locus_tag=VA249_RS21400;product=glucosamine-6-phosphate deaminase;protein_id=WP_128812413.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1537559 1537810 . + . ID=gene-VA249_RS21405;Name=VA249_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21405;old_locus_tag=VYA_40720 NZ_AP024166.1 Protein Homology CDS 1537559 1537810 . + 0 ID=cds-WP_128813485.1;Parent=gene-VA249_RS21405;Dbxref=Genbank:WP_128813485.1;Name=WP_128813485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392042.1;locus_tag=VA249_RS21405;product=DUF3081 domain-containing protein;protein_id=WP_128813485.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1538034 1538387 . - . ID=gene-VA249_RS21410;Name=VA249_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21410;old_locus_tag=VYA_40730 NZ_AP024166.1 Protein Homology CDS 1538034 1538387 . - 0 ID=cds-WP_128812414.1;Parent=gene-VA249_RS21410;Dbxref=Genbank:WP_128812414.1;Name=WP_128812414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010453583.1;locus_tag=VA249_RS21410;product=DUF413 domain-containing protein;protein_id=WP_128812414.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1538536 1539429 . + . ID=gene-VA249_RS21415;Name=VA249_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21415;old_locus_tag=VYA_40740 NZ_AP024166.1 Protein Homology CDS 1538536 1539429 . + 0 ID=cds-WP_128812415.1;Parent=gene-VA249_RS21415;Dbxref=Genbank:WP_128812415.1;Name=WP_128812415.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696587.1;locus_tag=VA249_RS21415;product=LysR family transcriptional regulator;protein_id=WP_128812415.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1539527 1539730 . - . ID=gene-VA249_RS21420;Name=VA249_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21420;old_locus_tag=VYA_40750 NZ_AP024166.1 Protein Homology CDS 1539527 1539730 . - 0 ID=cds-WP_128812416.1;Parent=gene-VA249_RS21420;Dbxref=Genbank:WP_128812416.1;Name=WP_128812416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428499.1;locus_tag=VA249_RS21420;product=hypothetical protein;protein_id=WP_128812416.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1540045 1541412 . + . ID=gene-VA249_RS21425;Name=VA249_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21425;old_locus_tag=VYA_40770 NZ_AP024166.1 Protein Homology CDS 1540045 1541412 . + 0 ID=cds-WP_221071087.1;Parent=gene-VA249_RS21425;Dbxref=Genbank:WP_221071087.1;Name=WP_221071087.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448912.1;locus_tag=VA249_RS21425;product=helix-turn-helix domain-containing protein;protein_id=WP_221071087.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1541409 1541891 . + . ID=gene-VA249_RS21430;Name=VA249_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21430;old_locus_tag=VYA_40780 NZ_AP024166.1 Protein Homology CDS 1541409 1541891 . + 0 ID=cds-WP_221071089.1;Parent=gene-VA249_RS21430;Dbxref=Genbank:WP_221071089.1;Name=WP_221071089.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428511.1;locus_tag=VA249_RS21430;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_221071089.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1541993 1542814 . + . ID=gene-VA249_RS21435;Name=VA249_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21435;old_locus_tag=VYA_40790 NZ_AP024166.1 Protein Homology CDS 1541993 1542814 . + 0 ID=cds-WP_221071090.1;Parent=gene-VA249_RS21435;Dbxref=Genbank:WP_221071090.1;Name=WP_221071090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017818335.1;locus_tag=VA249_RS21435;product=hypothetical protein;protein_id=WP_221071090.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1542899 1543507 . - . ID=gene-VA249_RS21440;Name=VA249_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21440;old_locus_tag=VYA_40800 NZ_AP024166.1 Protein Homology CDS 1542899 1543507 . - 0 ID=cds-WP_211918230.1;Parent=gene-VA249_RS21440;Dbxref=Genbank:WP_211918230.1;Name=WP_211918230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005448966.1;locus_tag=VA249_RS21440;product=YitT family protein;protein_id=WP_211918230.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1543815 1545245 . - . ID=gene-VA249_RS21445;Name=nhaD;gbkey=Gene;gene=nhaD;gene_biotype=protein_coding;locus_tag=VA249_RS21445;old_locus_tag=VYA_40810 NZ_AP024166.1 Protein Homology CDS 1543815 1545245 . - 0 ID=cds-WP_211918228.1;Parent=gene-VA249_RS21445;Dbxref=Genbank:WP_211918228.1;Name=WP_211918228.1;Ontology_term=GO:0006814,GO:0015297;gbkey=CDS;gene=nhaD;go_function=antiporter activity|0015297||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195075.1;locus_tag=VA249_RS21445;product=sodium:proton antiporter NhaD;protein_id=WP_211918228.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1545792 1546817 . - . ID=gene-VA249_RS21450;Name=VA249_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21450;old_locus_tag=VYA_40820 NZ_AP024166.1 Protein Homology CDS 1545792 1546817 . - 0 ID=cds-WP_221071093.1;Parent=gene-VA249_RS21450;Dbxref=Genbank:WP_221071093.1;Name=WP_221071093.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005428497.1;locus_tag=VA249_RS21450;product=acyltransferase family protein;protein_id=WP_221071093.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1547095 1547685 . + . ID=gene-VA249_RS21455;Name=VA249_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21455;old_locus_tag=VYA_40830 NZ_AP024166.1 Protein Homology CDS 1547095 1547685 . + 0 ID=cds-WP_221071095.1;Parent=gene-VA249_RS21455;Dbxref=Genbank:WP_221071095.1;Name=WP_221071095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009842210.1;locus_tag=VA249_RS21455;product=TetR/AcrR family transcriptional regulator;protein_id=WP_221071095.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1547823 1548701 . + . ID=gene-VA249_RS21460;Name=VA249_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21460;old_locus_tag=VYA_40840 NZ_AP024166.1 Protein Homology CDS 1547823 1548701 . + 0 ID=cds-WP_221071097.1;Parent=gene-VA249_RS21460;Dbxref=Genbank:WP_221071097.1;Name=WP_221071097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195077.1;locus_tag=VA249_RS21460;product=alpha/beta hydrolase;protein_id=WP_221071097.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1548737 1549234 . - . ID=gene-VA249_RS21465;Name=VA249_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21465;old_locus_tag=VYA_40850 NZ_AP024166.1 Protein Homology CDS 1548737 1549234 . - 0 ID=cds-WP_221072278.1;Parent=gene-VA249_RS21465;Dbxref=Genbank:WP_221072278.1;Name=WP_221072278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005434722.1;locus_tag=VA249_RS21465;product=DUF2850 domain-containing protein;protein_id=WP_221072278.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1549455 1549739 . + . ID=gene-VA249_RS21470;Name=VA249_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21470;old_locus_tag=VYA_40860 NZ_AP024166.1 Protein Homology CDS 1549455 1549739 . + 0 ID=cds-WP_221071100.1;Parent=gene-VA249_RS21470;Dbxref=Genbank:WP_221071100.1;Name=WP_221071100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464991.1;locus_tag=VA249_RS21470;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_221071100.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1549930 1550214 . + . ID=gene-VA249_RS21475;Name=VA249_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21475;old_locus_tag=VYA_40870 NZ_AP024166.1 Protein Homology CDS 1549930 1550214 . + 0 ID=cds-WP_221071102.1;Parent=gene-VA249_RS21475;Dbxref=Genbank:WP_221071102.1;Name=WP_221071102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020195079.1;locus_tag=VA249_RS21475;product=hypothetical protein;protein_id=WP_221071102.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1550629 1551927 . + . ID=gene-VA249_RS21480;Name=VA249_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21480;old_locus_tag=VYA_40880 NZ_AP024166.1 Protein Homology CDS 1550629 1551927 . + 0 ID=cds-WP_221071103.1;Parent=gene-VA249_RS21480;Dbxref=Genbank:WP_221071103.1;Name=WP_221071103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009706750.1;locus_tag=VA249_RS21480;product=carbohydrate porin;protein_id=WP_221071103.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1552271 1553275 . + . ID=gene-VA249_RS21485;Name=VA249_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21485;old_locus_tag=VYA_40890 NZ_AP024166.1 Protein Homology CDS 1552271 1553275 . + 0 ID=cds-WP_221071106.1;Parent=gene-VA249_RS21485;Dbxref=Genbank:WP_221071106.1;Name=WP_221071106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012601182.1;locus_tag=VA249_RS21485;product=LacI family transcriptional regulator;protein_id=WP_221071106.1;transl_table=11 NZ_AP024166.1 RefSeq gene 1553297 1554544 . + . ID=gene-VA249_RS14680;Name=VA249_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS14680 NZ_AP024166.1 Protein Homology CDS 1553297 1554544 . + 0 ID=cds-WP_211918211.1;Parent=gene-VA249_RS14680;Dbxref=Genbank:WP_211918211.1;Name=WP_211918211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004737066.1;locus_tag=VA249_RS14680;product=extracellular solute-binding protein;protein_id=WP_211918211.1;transl_table=11 ##sequence-region NZ_AP024167.1 1 320083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1074311 NZ_AP024167.1 RefSeq region 1 320083 . + . ID=NZ_AP024167.1:1..320083;Dbxref=taxon:1074311;Is_circular=true;Name=pSEA1;collection-date=2004-05-14;country=Japan:Kagawa;gbkey=Src;genome=plasmid;isolation-source=sediment [ENVO_00002007];lat-lon=34.381478 N 134.100808 E;mol_type=genomic DNA;plasmid-name=pSEA1;strain=04Ya108 NZ_AP024167.1 RefSeq gene 212 1219 . + . ID=gene-VA249_RS21495;Name=VA249_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21495;old_locus_tag=VYA_40900 NZ_AP024167.1 Protein Homology CDS 212 1219 . + 0 ID=cds-WP_025789584.1;Parent=gene-VA249_RS21495;Dbxref=Genbank:WP_025789584.1;Name=WP_025789584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205204.1;locus_tag=VA249_RS21495;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_025789584.1;transl_table=11 NZ_AP024167.1 RefSeq gene 1469 2467 . + . ID=gene-VA249_RS21500;Name=VA249_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21500;old_locus_tag=VYA_40910 NZ_AP024167.1 Protein Homology CDS 1469 2467 . + 0 ID=cds-WP_138955000.1;Parent=gene-VA249_RS21500;Dbxref=Genbank:WP_138955000.1;Name=WP_138955000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005310844.1;locus_tag=VA249_RS21500;product=glycosyl hydrolase 53 family protein;protein_id=WP_138955000.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 2590 3603 . - . ID=gene-VA249_RS21505;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=pseudogene;locus_tag=VA249_RS21505;pseudo=true NZ_AP024167.1 Protein Homology CDS 2590 3603 . - 0 ID=cds-VA249_RS21505;Parent=gene-VA249_RS21505;Note=internal stop;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010135867.1;locus_tag=VA249_RS21505;product=L-glyceraldehyde 3-phosphate reductase;pseudo=true;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 4312 5601 . - . ID=gene-VA249_RS21510;Name=VA249_RS21510;end_range=5601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS21510;old_locus_tag=VYA_40950;partial=true;pseudo=true NZ_AP024167.1 Protein Homology CDS 4312 5601 . - 0 ID=cds-VA249_RS21510;Parent=gene-VA249_RS21510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=5601,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006991878.1;locus_tag=VA249_RS21510;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 5696 6121 . - . ID=gene-VA249_RS21515;Name=VA249_RS21515;end_range=6121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS21515;old_locus_tag=VYA_40960;partial=true;pseudo=true NZ_AP024167.1 Protein Homology CDS 5696 6121 . - 0 ID=cds-VA249_RS21515;Parent=gene-VA249_RS21515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=6121,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006991878.1;locus_tag=VA249_RS21515;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_AP024167.1 RefSeq gene 6177 6881 . - . ID=gene-VA249_RS21520;Name=VA249_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21520;old_locus_tag=VYA_40970 NZ_AP024167.1 Protein Homology CDS 6177 6881 . - 0 ID=cds-WP_001067855.1;Parent=gene-VA249_RS21520;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=VA249_RS21520;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AP024167.1 RefSeq gene 7067 7708 . + . ID=gene-VA249_RS21525;Name=VA249_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21525;old_locus_tag=VYA_40980 NZ_AP024167.1 Protein Homology CDS 7067 7708 . + 0 ID=cds-WP_011751353.1;Parent=gene-VA249_RS21525;Dbxref=Genbank:WP_011751353.1;Name=WP_011751353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001011939.1;locus_tag=VA249_RS21525;product=type A-2 chloramphenicol O-acetyltransferase CatII;protein_id=WP_011751353.1;transl_table=11 NZ_AP024167.1 RefSeq gene 8382 9314 . + . ID=gene-VA249_RS21530;Name=VA249_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21530;old_locus_tag=VYA_40990 NZ_AP024167.1 Protein Homology CDS 8382 9314 . + 0 ID=cds-WP_004235553.1;Parent=gene-VA249_RS21530;Dbxref=Genbank:WP_004235553.1;Name=WP_004235553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611715.1;locus_tag=VA249_RS21530;product=IS5 family transposase;protein_id=WP_004235553.1;transl_table=11 NZ_AP024167.1 RefSeq gene 9694 12672 . - . ID=gene-VA249_RS21535;Name=VA249_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21535;old_locus_tag=VYA_41000 NZ_AP024167.1 Protein Homology CDS 9694 12672 . - 0 ID=cds-WP_159408525.1;Parent=gene-VA249_RS21535;Dbxref=Genbank:WP_159408525.1;Name=WP_159408525.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006991878.1;locus_tag=VA249_RS21535;product=Tn3 family transposase;protein_id=WP_159408525.1;transl_table=11 NZ_AP024167.1 RefSeq gene 13143 13958 . + . ID=gene-VA249_RS21540;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=VA249_RS21540;old_locus_tag=VYA_41010 NZ_AP024167.1 Protein Homology CDS 13143 13958 . + 0 ID=cds-WP_001043260.1;Parent=gene-VA249_RS21540;Dbxref=Genbank:WP_001043260.1;Name=WP_001043260.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=VA249_RS21540;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043260.1;transl_table=11 NZ_AP024167.1 RefSeq gene 14246 15469 . + . ID=gene-VA249_RS21545;Name=mef(C);gbkey=Gene;gene=mef(C);gene_biotype=protein_coding;locus_tag=VA249_RS21545;old_locus_tag=VYA_41020 NZ_AP024167.1 Protein Homology CDS 14246 15469 . + 0 ID=cds-WP_014386804.1;Parent=gene-VA249_RS21545;Dbxref=Genbank:WP_014386804.1;Name=WP_014386804.1;Ontology_term=GO:0022857;gbkey=CDS;gene=mef(C);go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386804.1;locus_tag=VA249_RS21545;product=macrolide efflux MFS transporter Mef(C);protein_id=WP_014386804.1;transl_table=11 NZ_AP024167.1 RefSeq gene 15474 16358 . + . ID=gene-VA249_RS21550;Name=VA249_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21550;old_locus_tag=VYA_41030 NZ_AP024167.1 Protein Homology CDS 15474 16358 . + 0 ID=cds-WP_014386803.1;Parent=gene-VA249_RS21550;Dbxref=Genbank:WP_014386803.1;Name=WP_014386803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386803.1;locus_tag=VA249_RS21550;product=Mph(G) family macrolide 2'-phosphotransferase;protein_id=WP_014386803.1;transl_table=11 NZ_AP024167.1 RefSeq gene 16631 18124 . - . ID=gene-VA249_RS21555;Name=VA249_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21555;old_locus_tag=VYA_41040 NZ_AP024167.1 Protein Homology CDS 16631 18124 . - 0 ID=cds-WP_001120888.1;Parent=gene-VA249_RS21555;Dbxref=Genbank:WP_001120888.1;Name=WP_001120888.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120888.1;locus_tag=VA249_RS21555;product=IS91 family transposase;protein_id=WP_001120888.1;transl_table=11 NZ_AP024167.1 RefSeq gene 18542 21520 . - . ID=gene-VA249_RS21560;Name=VA249_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21560;old_locus_tag=VYA_41060 NZ_AP024167.1 Protein Homology CDS 18542 21520 . - 0 ID=cds-WP_221072339.1;Parent=gene-VA249_RS21560;Dbxref=Genbank:WP_221072339.1;Name=WP_221072339.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006991878.1;locus_tag=VA249_RS21560;product=Tn3 family transposase;protein_id=WP_221072339.1;transl_table=11 NZ_AP024167.1 RefSeq gene 21763 22608 . - . ID=gene-VA249_RS21565;Name=VA249_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21565;old_locus_tag=VYA_41070 NZ_AP024167.1 GeneMarkS-2+ CDS 21763 22608 . - 0 ID=cds-WP_176703858.1;Parent=gene-VA249_RS21565;Dbxref=Genbank:WP_176703858.1;Name=WP_176703858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21565;product=hypothetical protein;protein_id=WP_176703858.1;transl_table=11 NZ_AP024167.1 RefSeq gene 23869 24177 . + . ID=gene-VA249_RS21570;Name=VA249_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21570 NZ_AP024167.1 GeneMarkS-2+ CDS 23869 24177 . + 0 ID=cds-WP_176703856.1;Parent=gene-VA249_RS21570;Dbxref=Genbank:WP_176703856.1;Name=WP_176703856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21570;product=hypothetical protein;protein_id=WP_176703856.1;transl_table=11 NZ_AP024167.1 RefSeq gene 24833 25195 . + . ID=gene-VA249_RS21575;Name=VA249_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21575;old_locus_tag=VYA_41090 NZ_AP024167.1 GeneMarkS-2+ CDS 24833 25195 . + 0 ID=cds-WP_176703855.1;Parent=gene-VA249_RS21575;Dbxref=Genbank:WP_176703855.1;Name=WP_176703855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21575;product=hypothetical protein;protein_id=WP_176703855.1;transl_table=11 NZ_AP024167.1 RefSeq gene 25511 26278 . + . ID=gene-VA249_RS21580;Name=VA249_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21580;old_locus_tag=VYA_41100 NZ_AP024167.1 Protein Homology CDS 25511 26278 . + 0 ID=cds-WP_176703854.1;Parent=gene-VA249_RS21580;Dbxref=Genbank:WP_176703854.1;Name=WP_176703854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020588360.1;locus_tag=VA249_RS21580;product=AIM24 family protein;protein_id=WP_176703854.1;transl_table=11 NZ_AP024167.1 RefSeq gene 26781 28997 . - . ID=gene-VA249_RS21585;Name=VA249_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21585;old_locus_tag=VYA_41110 NZ_AP024167.1 GeneMarkS-2+ CDS 26781 28997 . - 0 ID=cds-WP_176703853.1;Parent=gene-VA249_RS21585;Dbxref=Genbank:WP_176703853.1;Name=WP_176703853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21585;product=hypothetical protein;protein_id=WP_176703853.1;transl_table=11 NZ_AP024167.1 RefSeq gene 29719 30144 . - . ID=gene-VA249_RS21590;Name=VA249_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21590;old_locus_tag=VYA_41120 NZ_AP024167.1 GeneMarkS-2+ CDS 29719 30144 . - 0 ID=cds-WP_176703852.1;Parent=gene-VA249_RS21590;Dbxref=Genbank:WP_176703852.1;Name=WP_176703852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21590;product=hypothetical protein;protein_id=WP_176703852.1;transl_table=11 NZ_AP024167.1 RefSeq gene 30151 31068 . - . ID=gene-VA249_RS21595;Name=VA249_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21595;old_locus_tag=VYA_41130 NZ_AP024167.1 GeneMarkS-2+ CDS 30151 31068 . - 0 ID=cds-WP_176703851.1;Parent=gene-VA249_RS21595;Dbxref=Genbank:WP_176703851.1;Name=WP_176703851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21595;product=hypothetical protein;protein_id=WP_176703851.1;transl_table=11 NZ_AP024167.1 RefSeq gene 31219 31359 . - . ID=gene-VA249_RS21600;Name=VA249_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21600;old_locus_tag=VYA_41140 NZ_AP024167.1 GeneMarkS-2+ CDS 31219 31359 . - 0 ID=cds-WP_176703850.1;Parent=gene-VA249_RS21600;Dbxref=Genbank:WP_176703850.1;Name=WP_176703850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21600;product=hypothetical protein;protein_id=WP_176703850.1;transl_table=11 NZ_AP024167.1 RefSeq gene 31485 31745 . - . ID=gene-VA249_RS21605;Name=VA249_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21605 NZ_AP024167.1 GeneMarkS-2+ CDS 31485 31745 . - 0 ID=cds-WP_221072342.1;Parent=gene-VA249_RS21605;Dbxref=Genbank:WP_221072342.1;Name=WP_221072342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21605;product=hypothetical protein;protein_id=WP_221072342.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 32228 32637 . + . ID=gene-VA249_RS21610;Name=VA249_RS21610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS21610;old_locus_tag=VYA_41150;partial=true;pseudo=true;start_range=.,32228 NZ_AP024167.1 Protein Homology CDS 32228 32637 . + 0 ID=cds-VA249_RS21610;Parent=gene-VA249_RS21610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010573793.1;locus_tag=VA249_RS21610;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,32228;transl_table=11 NZ_AP024167.1 RefSeq gene 32987 34195 . + . ID=gene-VA249_RS21615;Name=VA249_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21615;old_locus_tag=VYA_41160 NZ_AP024167.1 Protein Homology CDS 32987 34195 . + 0 ID=cds-WP_032073033.1;Parent=gene-VA249_RS21615;Dbxref=Genbank:WP_032073033.1;Name=WP_032073033.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1;locus_tag=VA249_RS21615;product=IS4 family transposase;protein_id=WP_032073033.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 34210 34371 . - . ID=gene-VA249_RS21620;Name=VA249_RS21620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS21620;partial=true;pseudo=true;start_range=.,34210 NZ_AP024167.1 Protein Homology CDS 34210 34371 . - 0 ID=cds-VA249_RS21620;Parent=gene-VA249_RS21620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319681.1;locus_tag=VA249_RS21620;partial=true;product=cysteine-rich KTR domain-containing protein;pseudo=true;start_range=.,34210;transl_table=11 NZ_AP024167.1 RefSeq gene 34490 36409 . - . ID=gene-VA249_RS21625;Name=tet(M);gbkey=Gene;gene=tet(M);gene_biotype=protein_coding;locus_tag=VA249_RS21625;old_locus_tag=VYA_41170 NZ_AP024167.1 Protein Homology CDS 34490 36409 . - 0 ID=cds-WP_014386813.1;Parent=gene-VA249_RS21625;Dbxref=Genbank:WP_014386813.1;Name=WP_014386813.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=tet(M);go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117014.1;locus_tag=VA249_RS21625;product=tetracycline resistance ribosomal protection protein Tet(M);protein_id=WP_014386813.1;transl_table=11 NZ_AP024167.1 RefSeq gene 36425 36511 . - . ID=gene-VA249_RS24210;Name=VA249_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24210 NZ_AP024167.1 Protein Homology CDS 36425 36511 . - 0 ID=cds-WP_012386611.1;Parent=gene-VA249_RS24210;Dbxref=Genbank:WP_012386611.1;Name=WP_012386611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011058339.1;locus_tag=VA249_RS24210;product=tetracycline resistance determinant leader peptide;protein_id=WP_012386611.1;transl_table=11 NZ_AP024167.1 RefSeq gene 36636 37844 . + . ID=gene-VA249_RS21635;Name=VA249_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21635;old_locus_tag=VYA_41180 NZ_AP024167.1 Protein Homology CDS 36636 37844 . + 0 ID=cds-WP_001352368.1;Parent=gene-VA249_RS21635;Dbxref=Genbank:WP_001352368.1;Name=WP_001352368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1;locus_tag=VA249_RS21635;product=IS4 family transposase;protein_id=WP_001352368.1;transl_table=11 NZ_AP024167.1 RefSeq gene 37854 38270 . - . ID=gene-VA249_RS21640;Name=VA249_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21640;old_locus_tag=VYA_41190 NZ_AP024167.1 Protein Homology CDS 37854 38270 . - 0 ID=cds-WP_000275180.1;Parent=gene-VA249_RS21640;Dbxref=Genbank:WP_000275180.1;Name=WP_000275180.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000275181.1;locus_tag=VA249_RS21640;product=AraC family transcriptional regulator;protein_id=WP_000275180.1;transl_table=11 NZ_AP024167.1 RefSeq gene 38358 38951 . + . ID=gene-VA249_RS21645;Name=tetC;gbkey=Gene;gene=tetC;gene_biotype=protein_coding;locus_tag=VA249_RS21645;old_locus_tag=VYA_41200 NZ_AP024167.1 Protein Homology CDS 38358 38951 . + 0 ID=cds-WP_000428546.1;Parent=gene-VA249_RS21645;Dbxref=Genbank:WP_000428546.1;Name=WP_000428546.1;Ontology_term=GO:0003677;gbkey=CDS;gene=tetC;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000428546.1;locus_tag=VA249_RS21645;product=tetracyline resistance-associated transcriptional repressor TetC;protein_id=WP_000428546.1;transl_table=11 NZ_AP024167.1 RefSeq gene 39064 40269 . - . ID=gene-VA249_RS21650;Name=tet(B);gbkey=Gene;gene=tet(B);gene_biotype=protein_coding;locus_tag=VA249_RS21650;old_locus_tag=VYA_41210 NZ_AP024167.1 Protein Homology CDS 39064 40269 . - 0 ID=cds-WP_010446567.1;Parent=gene-VA249_RS21650;Dbxref=Genbank:WP_010446567.1;Name=WP_010446567.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=tet(B);go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089064.1;locus_tag=VA249_RS21650;product=tetracycline efflux MFS transporter Tet(B);protein_id=WP_010446567.1;transl_table=11 NZ_AP024167.1 RefSeq gene 40351 40974 . + . ID=gene-VA249_RS21655;Name=tetR(B);gbkey=Gene;gene=tetR(B);gene_biotype=protein_coding;locus_tag=VA249_RS21655;old_locus_tag=VYA_41220 NZ_AP024167.1 Protein Homology CDS 40351 40974 . + 0 ID=cds-WP_000088605.1;Parent=gene-VA249_RS21655;Dbxref=Genbank:WP_000088605.1;Name=WP_000088605.1;gbkey=CDS;gene=tetR(B);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088605.1;locus_tag=VA249_RS21655;product=tetracycline resistance transcriptional repressor TetR(B);protein_id=WP_000088605.1;transl_table=11 NZ_AP024167.1 RefSeq gene 40952 41638 . - . ID=gene-VA249_RS21660;Name=VA249_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21660;old_locus_tag=VYA_41230 NZ_AP024167.1 Protein Homology CDS 40952 41638 . - 0 ID=cds-WP_001284954.1;Parent=gene-VA249_RS21660;Dbxref=Genbank:WP_001284954.1;Name=WP_001284954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284954.1;locus_tag=VA249_RS21660;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001284954.1;transl_table=11 NZ_AP024167.1 RefSeq gene 41646 42032 . - . ID=gene-VA249_RS21665;Name=VA249_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21665;old_locus_tag=VYA_41240 NZ_AP024167.1 Protein Homology CDS 41646 42032 . - 0 ID=cds-WP_000460651.1;Parent=gene-VA249_RS21665;Dbxref=Genbank:WP_000460651.1;Name=WP_000460651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460649.1;locus_tag=VA249_RS21665;product=hypothetical protein;protein_id=WP_000460651.1;transl_table=11 NZ_AP024167.1 RefSeq gene 42025 42345 . - . ID=gene-VA249_RS21670;Name=VA249_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21670;old_locus_tag=VYA_41250 NZ_AP024167.1 Protein Homology CDS 42025 42345 . - 0 ID=cds-WP_000562370.1;Parent=gene-VA249_RS21670;Dbxref=Genbank:WP_000562370.1;Name=WP_000562370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000562370.1;locus_tag=VA249_RS21670;product=antibiotic biosynthesis monooxygenase;protein_id=WP_000562370.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 42789 43829 . + . ID=gene-VA249_RS21675;Name=gltS;end_range=43829,.;gbkey=Gene;gene=gltS;gene_biotype=pseudogene;locus_tag=VA249_RS21675;old_locus_tag=VYA_41260;partial=true;pseudo=true NZ_AP024167.1 Protein Homology CDS 42789 43829 . + 0 ID=cds-VA249_RS21675;Parent=gene-VA249_RS21675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015813,GO:0015501;end_range=43829,.;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599530.1;locus_tag=VA249_RS21675;partial=true;product=sodium/glutamate symporter;pseudo=true;transl_table=11 NZ_AP024167.1 RefSeq gene 43934 45142 . + . ID=gene-VA249_RS21680;Name=VA249_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21680;old_locus_tag=VYA_41270 NZ_AP024167.1 Protein Homology CDS 43934 45142 . + 0 ID=cds-WP_032073033.1-2;Parent=gene-VA249_RS21680;Dbxref=Genbank:WP_032073033.1;Name=WP_032073033.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1;locus_tag=VA249_RS21680;product=IS4 family transposase;protein_id=WP_032073033.1;transl_table=11 NZ_AP024167.1 RefSeq gene 45100 45594 . - . ID=gene-VA249_RS21685;Name=VA249_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21685;old_locus_tag=VYA_41280 NZ_AP024167.1 GeneMarkS-2+ CDS 45100 45594 . - 0 ID=cds-WP_176703847.1;Parent=gene-VA249_RS21685;Dbxref=Genbank:WP_176703847.1;Name=WP_176703847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21685;product=hypothetical protein;protein_id=WP_176703847.1;transl_table=11 NZ_AP024167.1 RefSeq gene 45763 46125 . + . ID=gene-VA249_RS21690;Name=VA249_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21690;old_locus_tag=VYA_41290 NZ_AP024167.1 GeneMarkS-2+ CDS 45763 46125 . + 0 ID=cds-WP_176703846.1;Parent=gene-VA249_RS21690;Dbxref=Genbank:WP_176703846.1;Name=WP_176703846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21690;product=hypothetical protein;protein_id=WP_176703846.1;transl_table=11 NZ_AP024167.1 RefSeq gene 46438 46791 . - . ID=gene-VA249_RS21695;Name=VA249_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21695;old_locus_tag=VYA_41300 NZ_AP024167.1 GeneMarkS-2+ CDS 46438 46791 . - 0 ID=cds-WP_176703845.1;Parent=gene-VA249_RS21695;Dbxref=Genbank:WP_176703845.1;Name=WP_176703845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21695;product=hypothetical protein;protein_id=WP_176703845.1;transl_table=11 NZ_AP024167.1 RefSeq gene 46846 47199 . - . ID=gene-VA249_RS21700;Name=VA249_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21700;old_locus_tag=VYA_41310 NZ_AP024167.1 GeneMarkS-2+ CDS 46846 47199 . - 0 ID=cds-WP_176703844.1;Parent=gene-VA249_RS21700;Dbxref=Genbank:WP_176703844.1;Name=WP_176703844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21700;product=hypothetical protein;protein_id=WP_176703844.1;transl_table=11 NZ_AP024167.1 RefSeq gene 47199 47858 . - . ID=gene-VA249_RS21705;Name=VA249_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21705;old_locus_tag=VYA_41320 NZ_AP024167.1 GeneMarkS-2+ CDS 47199 47858 . - 0 ID=cds-WP_176703843.1;Parent=gene-VA249_RS21705;Dbxref=Genbank:WP_176703843.1;Name=WP_176703843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21705;product=hypothetical protein;protein_id=WP_176703843.1;transl_table=11 NZ_AP024167.1 RefSeq gene 48212 48589 . + . ID=gene-VA249_RS21710;Name=VA249_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21710 NZ_AP024167.1 GeneMarkS-2+ CDS 48212 48589 . + 0 ID=cds-WP_221072344.1;Parent=gene-VA249_RS21710;Dbxref=Genbank:WP_221072344.1;Name=WP_221072344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21710;product=hypothetical protein;protein_id=WP_221072344.1;transl_table=11 NZ_AP024167.1 RefSeq gene 48703 49473 . + . ID=gene-VA249_RS21715;Name=VA249_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21715;old_locus_tag=VYA_41330 NZ_AP024167.1 GeneMarkS-2+ CDS 48703 49473 . + 0 ID=cds-WP_176703841.1;Parent=gene-VA249_RS21715;Dbxref=Genbank:WP_176703841.1;Name=WP_176703841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21715;product=hypothetical protein;protein_id=WP_176703841.1;transl_table=11 NZ_AP024167.1 RefSeq gene 49483 49980 . + . ID=gene-VA249_RS21720;Name=VA249_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21720;old_locus_tag=VYA_41340 NZ_AP024167.1 GeneMarkS-2+ CDS 49483 49980 . + 0 ID=cds-WP_176703840.1;Parent=gene-VA249_RS21720;Dbxref=Genbank:WP_176703840.1;Name=WP_176703840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21720;product=hypothetical protein;protein_id=WP_176703840.1;transl_table=11 NZ_AP024167.1 RefSeq gene 50064 50570 . - . ID=gene-VA249_RS21725;Name=VA249_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21725;old_locus_tag=VYA_41350 NZ_AP024167.1 GeneMarkS-2+ CDS 50064 50570 . - 0 ID=cds-WP_221072346.1;Parent=gene-VA249_RS21725;Dbxref=Genbank:WP_221072346.1;Name=WP_221072346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21725;product=hypothetical protein;protein_id=WP_221072346.1;transl_table=11 NZ_AP024167.1 RefSeq gene 50776 52494 . + . ID=gene-VA249_RS21730;Name=VA249_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21730;old_locus_tag=VYA_41360 NZ_AP024167.1 GeneMarkS-2+ CDS 50776 52494 . + 0 ID=cds-WP_176703838.1;Parent=gene-VA249_RS21730;Dbxref=Genbank:WP_176703838.1;Name=WP_176703838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21730;product=hypothetical protein;protein_id=WP_176703838.1;transl_table=11 NZ_AP024167.1 RefSeq gene 54446 54619 . + . ID=gene-VA249_RS21735;Name=VA249_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21735;old_locus_tag=VYA_41370 NZ_AP024167.1 GeneMarkS-2+ CDS 54446 54619 . + 0 ID=cds-WP_176703837.1;Parent=gene-VA249_RS21735;Dbxref=Genbank:WP_176703837.1;Name=WP_176703837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21735;product=hypothetical protein;protein_id=WP_176703837.1;transl_table=11 NZ_AP024167.1 RefSeq gene 55375 57378 . + . ID=gene-VA249_RS21740;Name=VA249_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21740;old_locus_tag=VYA_41380 NZ_AP024167.1 Protein Homology CDS 55375 57378 . + 0 ID=cds-WP_176703836.1;Parent=gene-VA249_RS21740;Dbxref=Genbank:WP_176703836.1;Name=WP_176703836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023254.2;locus_tag=VA249_RS21740;product=DUF3346 domain-containing protein;protein_id=WP_176703836.1;transl_table=11 NZ_AP024167.1 RefSeq gene 57537 58064 . + . ID=gene-VA249_RS21745;Name=VA249_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21745;old_locus_tag=VYA_41390 NZ_AP024167.1 GeneMarkS-2+ CDS 57537 58064 . + 0 ID=cds-WP_176703835.1;Parent=gene-VA249_RS21745;Dbxref=Genbank:WP_176703835.1;Name=WP_176703835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21745;product=hypothetical protein;protein_id=WP_176703835.1;transl_table=11 NZ_AP024167.1 RefSeq gene 58115 58849 . - . ID=gene-VA249_RS21750;Name=VA249_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21750;old_locus_tag=VYA_41400 NZ_AP024167.1 GeneMarkS-2+ CDS 58115 58849 . - 0 ID=cds-WP_176703834.1;Parent=gene-VA249_RS21750;Dbxref=Genbank:WP_176703834.1;Name=WP_176703834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21750;product=hypothetical protein;protein_id=WP_176703834.1;transl_table=11 NZ_AP024167.1 RefSeq gene 58901 59251 . - . ID=gene-VA249_RS21755;Name=VA249_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21755;old_locus_tag=VYA_41410 NZ_AP024167.1 GeneMarkS-2+ CDS 58901 59251 . - 0 ID=cds-WP_176703833.1;Parent=gene-VA249_RS21755;Dbxref=Genbank:WP_176703833.1;Name=WP_176703833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21755;product=hypothetical protein;protein_id=WP_176703833.1;transl_table=11 NZ_AP024167.1 RefSeq gene 59244 59645 . - . ID=gene-VA249_RS21760;Name=VA249_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21760;old_locus_tag=VYA_41420 NZ_AP024167.1 GeneMarkS-2+ CDS 59244 59645 . - 0 ID=cds-WP_176703832.1;Parent=gene-VA249_RS21760;Dbxref=Genbank:WP_176703832.1;Name=WP_176703832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21760;product=hypothetical protein;protein_id=WP_176703832.1;transl_table=11 NZ_AP024167.1 RefSeq gene 59638 60459 . - . ID=gene-VA249_RS21765;Name=VA249_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21765;old_locus_tag=VYA_41430 NZ_AP024167.1 Protein Homology CDS 59638 60459 . - 0 ID=cds-WP_176703831.1;Parent=gene-VA249_RS21765;Dbxref=Genbank:WP_176703831.1;Name=WP_176703831.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012110799.1;locus_tag=VA249_RS21765;product=ABC transporter permease subunit;protein_id=WP_176703831.1;transl_table=11 NZ_AP024167.1 RefSeq gene 60475 61503 . - . ID=gene-VA249_RS21770;Name=VA249_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21770;old_locus_tag=VYA_41440 NZ_AP024167.1 Protein Homology CDS 60475 61503 . - 0 ID=cds-WP_176703830.1;Parent=gene-VA249_RS21770;Dbxref=Genbank:WP_176703830.1;Name=WP_176703830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011399143.1;locus_tag=VA249_RS21770;product=putative urea ABC transporter substrate-binding protein;protein_id=WP_176703830.1;transl_table=11 NZ_AP024167.1 RefSeq gene 61571 62722 . - . ID=gene-VA249_RS21775;Name=VA249_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21775;old_locus_tag=VYA_41450 NZ_AP024167.1 Protein Homology CDS 61571 62722 . - 0 ID=cds-WP_176703829.1;Parent=gene-VA249_RS21775;Dbxref=Genbank:WP_176703829.1;Name=WP_176703829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017617.2;locus_tag=VA249_RS21775;product=toxic anion resistance protein;protein_id=WP_176703829.1;transl_table=11 NZ_AP024167.1 RefSeq gene 62728 63501 . - . ID=gene-VA249_RS21780;Name=VA249_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21780;old_locus_tag=VYA_41460 NZ_AP024167.1 GeneMarkS-2+ CDS 62728 63501 . - 0 ID=cds-WP_176703828.1;Parent=gene-VA249_RS21780;Dbxref=Genbank:WP_176703828.1;Name=WP_176703828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21780;product=hypothetical protein;protein_id=WP_176703828.1;transl_table=11 NZ_AP024167.1 RefSeq gene 63511 65034 . - . ID=gene-VA249_RS21785;Name=VA249_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21785;old_locus_tag=VYA_41470 NZ_AP024167.1 Protein Homology CDS 63511 65034 . - 0 ID=cds-WP_176703827.1;Parent=gene-VA249_RS21785;Dbxref=Genbank:WP_176703827.1;Name=WP_176703827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=VA249_RS21785;product=phosphate ABC transporter substrate-binding/OmpA family protein;protein_id=WP_176703827.1;transl_table=11 NZ_AP024167.1 RefSeq gene 65038 65835 . - . ID=gene-VA249_RS21790;Name=VA249_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21790;old_locus_tag=VYA_41480 NZ_AP024167.1 Protein Homology CDS 65038 65835 . - 0 ID=cds-WP_176703826.1;Parent=gene-VA249_RS21790;Dbxref=Genbank:WP_176703826.1;Name=WP_176703826.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012321.2;locus_tag=VA249_RS21790;product=VWA domain-containing protein;protein_id=WP_176703826.1;transl_table=11 NZ_AP024167.1 RefSeq gene 65848 67515 . - . ID=gene-VA249_RS21795;Name=VA249_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21795;old_locus_tag=VYA_41490 NZ_AP024167.1 GeneMarkS-2+ CDS 65848 67515 . - 0 ID=cds-WP_176703825.1;Parent=gene-VA249_RS21795;Dbxref=Genbank:WP_176703825.1;Name=WP_176703825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21795;product=nitrate ABC transporter substrate-binding protein;protein_id=WP_176703825.1;transl_table=11 NZ_AP024167.1 RefSeq gene 67505 68413 . - . ID=gene-VA249_RS21800;Name=VA249_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21800;old_locus_tag=VYA_41500 NZ_AP024167.1 Protein Homology CDS 67505 68413 . - 0 ID=cds-WP_176703824.1;Parent=gene-VA249_RS21800;Dbxref=Genbank:WP_176703824.1;Name=WP_176703824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011399149.1;locus_tag=VA249_RS21800;product=ABC transporter ATP-binding protein;protein_id=WP_176703824.1;transl_table=11 NZ_AP024167.1 RefSeq gene 68410 69000 . - . ID=gene-VA249_RS21805;Name=VA249_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21805;old_locus_tag=VYA_41510 NZ_AP024167.1 GeneMarkS-2+ CDS 68410 69000 . - 0 ID=cds-WP_176703823.1;Parent=gene-VA249_RS21805;Dbxref=Genbank:WP_176703823.1;Name=WP_176703823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21805;product=hypothetical protein;protein_id=WP_176703823.1;transl_table=11 NZ_AP024167.1 RefSeq gene 69330 70850 . + . ID=gene-VA249_RS21810;Name=VA249_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21810;old_locus_tag=VYA_41520 NZ_AP024167.1 GeneMarkS-2+ CDS 69330 70850 . + 0 ID=cds-WP_221072347.1;Parent=gene-VA249_RS21810;Dbxref=Genbank:WP_221072347.1;Name=WP_221072347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21810;product=hypothetical protein;protein_id=WP_221072347.1;transl_table=11 NZ_AP024167.1 RefSeq gene 70916 71230 . + . ID=gene-VA249_RS21815;Name=VA249_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21815;old_locus_tag=VYA_41530 NZ_AP024167.1 GeneMarkS-2+ CDS 70916 71230 . + 0 ID=cds-WP_176703821.1;Parent=gene-VA249_RS21815;Dbxref=Genbank:WP_176703821.1;Name=WP_176703821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21815;product=hypothetical protein;protein_id=WP_176703821.1;transl_table=11 NZ_AP024167.1 RefSeq gene 71249 71572 . + . ID=gene-VA249_RS21820;Name=VA249_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21820;old_locus_tag=VYA_41540 NZ_AP024167.1 GeneMarkS-2+ CDS 71249 71572 . + 0 ID=cds-WP_176703820.1;Parent=gene-VA249_RS21820;Dbxref=Genbank:WP_176703820.1;Name=WP_176703820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21820;product=hypothetical protein;protein_id=WP_176703820.1;transl_table=11 NZ_AP024167.1 RefSeq gene 71647 72051 . + . ID=gene-VA249_RS21825;Name=VA249_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21825;old_locus_tag=VYA_41550 NZ_AP024167.1 GeneMarkS-2+ CDS 71647 72051 . + 0 ID=cds-WP_176703819.1;Parent=gene-VA249_RS21825;Dbxref=Genbank:WP_176703819.1;Name=WP_176703819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21825;product=hypothetical protein;protein_id=WP_176703819.1;transl_table=11 NZ_AP024167.1 RefSeq gene 72056 72586 . + . ID=gene-VA249_RS21830;Name=VA249_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21830;old_locus_tag=VYA_41560 NZ_AP024167.1 GeneMarkS-2+ CDS 72056 72586 . + 0 ID=cds-WP_176703818.1;Parent=gene-VA249_RS21830;Dbxref=Genbank:WP_176703818.1;Name=WP_176703818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21830;product=hypothetical protein;protein_id=WP_176703818.1;transl_table=11 NZ_AP024167.1 RefSeq gene 73046 73675 . + . ID=gene-VA249_RS21835;Name=VA249_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21835;old_locus_tag=VYA_41570 NZ_AP024167.1 GeneMarkS-2+ CDS 73046 73675 . + 0 ID=cds-WP_176703817.1;Parent=gene-VA249_RS21835;Dbxref=Genbank:WP_176703817.1;Name=WP_176703817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21835;product=hypothetical protein;protein_id=WP_176703817.1;transl_table=11 NZ_AP024167.1 RefSeq gene 73688 73906 . + . ID=gene-VA249_RS21840;Name=VA249_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21840;old_locus_tag=VYA_41580 NZ_AP024167.1 Protein Homology CDS 73688 73906 . + 0 ID=cds-WP_176703816.1;Parent=gene-VA249_RS21840;Dbxref=Genbank:WP_176703816.1;Name=WP_176703816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025810.2;locus_tag=VA249_RS21840;product=hypothetical protein;protein_id=WP_176703816.1;transl_table=11 NZ_AP024167.1 RefSeq gene 73910 74092 . + . ID=gene-VA249_RS21845;Name=VA249_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21845;old_locus_tag=VYA_41590 NZ_AP024167.1 GeneMarkS-2+ CDS 73910 74092 . + 0 ID=cds-WP_176703815.1;Parent=gene-VA249_RS21845;Dbxref=Genbank:WP_176703815.1;Name=WP_176703815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21845;product=hypothetical protein;protein_id=WP_176703815.1;transl_table=11 NZ_AP024167.1 RefSeq gene 74110 75150 . + . ID=gene-VA249_RS21850;Name=VA249_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21850;old_locus_tag=VYA_41600 NZ_AP024167.1 GeneMarkS-2+ CDS 74110 75150 . + 0 ID=cds-WP_176703814.1;Parent=gene-VA249_RS21850;Dbxref=Genbank:WP_176703814.1;Name=WP_176703814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21850;product=hypothetical protein;protein_id=WP_176703814.1;transl_table=11 NZ_AP024167.1 RefSeq gene 75141 75869 . + . ID=gene-VA249_RS21855;Name=VA249_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21855;old_locus_tag=VYA_41610 NZ_AP024167.1 Protein Homology CDS 75141 75869 . + 0 ID=cds-WP_176703813.1;Parent=gene-VA249_RS21855;Dbxref=Genbank:WP_176703813.1;Name=WP_176703813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025815.2;locus_tag=VA249_RS21855;product=hypothetical protein;protein_id=WP_176703813.1;transl_table=11 NZ_AP024167.1 RefSeq gene 75874 76449 . + . ID=gene-VA249_RS21860;Name=VA249_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21860;old_locus_tag=VYA_41620 NZ_AP024167.1 GeneMarkS-2+ CDS 75874 76449 . + 0 ID=cds-WP_176703812.1;Parent=gene-VA249_RS21860;Dbxref=Genbank:WP_176703812.1;Name=WP_176703812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21860;product=hypothetical protein;protein_id=WP_176703812.1;transl_table=11 NZ_AP024167.1 RefSeq gene 76501 77286 . + . ID=gene-VA249_RS21865;Name=VA249_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21865;old_locus_tag=VYA_41630 NZ_AP024167.1 GeneMarkS-2+ CDS 76501 77286 . + 0 ID=cds-WP_176703811.1;Parent=gene-VA249_RS21865;Dbxref=Genbank:WP_176703811.1;Name=WP_176703811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21865;product=hypothetical protein;protein_id=WP_176703811.1;transl_table=11 NZ_AP024167.1 RefSeq gene 77283 77465 . - . ID=gene-VA249_RS21870;Name=VA249_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21870;old_locus_tag=VYA_41640 NZ_AP024167.1 GeneMarkS-2+ CDS 77283 77465 . - 0 ID=cds-WP_176703810.1;Parent=gene-VA249_RS21870;Dbxref=Genbank:WP_176703810.1;Name=WP_176703810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21870;product=hypothetical protein;protein_id=WP_176703810.1;transl_table=11 NZ_AP024167.1 RefSeq gene 77458 77880 . - . ID=gene-VA249_RS21875;Name=VA249_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21875;old_locus_tag=VYA_41650 NZ_AP024167.1 GeneMarkS-2+ CDS 77458 77880 . - 0 ID=cds-WP_176703809.1;Parent=gene-VA249_RS21875;Dbxref=Genbank:WP_176703809.1;Name=WP_176703809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21875;product=hypothetical protein;protein_id=WP_176703809.1;transl_table=11 NZ_AP024167.1 RefSeq gene 78000 78956 . + . ID=gene-VA249_RS21880;Name=VA249_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21880;old_locus_tag=VYA_41660 NZ_AP024167.1 GeneMarkS-2+ CDS 78000 78956 . + 0 ID=cds-WP_176703808.1;Parent=gene-VA249_RS21880;Dbxref=Genbank:WP_176703808.1;Name=WP_176703808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21880;product=hypothetical protein;protein_id=WP_176703808.1;transl_table=11 NZ_AP024167.1 RefSeq gene 78963 79160 . + . ID=gene-VA249_RS21885;Name=VA249_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21885;old_locus_tag=VYA_41670 NZ_AP024167.1 GeneMarkS-2+ CDS 78963 79160 . + 0 ID=cds-WP_176703807.1;Parent=gene-VA249_RS21885;Dbxref=Genbank:WP_176703807.1;Name=WP_176703807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21885;product=hypothetical protein;protein_id=WP_176703807.1;transl_table=11 NZ_AP024167.1 RefSeq gene 79218 79946 . + . ID=gene-VA249_RS21890;Name=VA249_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21890;old_locus_tag=VYA_41680 NZ_AP024167.1 Protein Homology CDS 79218 79946 . + 0 ID=cds-WP_176703806.1;Parent=gene-VA249_RS21890;Dbxref=Genbank:WP_176703806.1;Name=WP_176703806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025815.2;locus_tag=VA249_RS21890;product=hypothetical protein;protein_id=WP_176703806.1;transl_table=11 NZ_AP024167.1 RefSeq gene 79949 80746 . + . ID=gene-VA249_RS21895;Name=VA249_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21895;old_locus_tag=VYA_41690 NZ_AP024167.1 Protein Homology CDS 79949 80746 . + 0 ID=cds-WP_176703805.1;Parent=gene-VA249_RS21895;Dbxref=Genbank:WP_176703805.1;Name=WP_176703805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03736.1;locus_tag=VA249_RS21895;product=PRTRC system ThiF family protein;protein_id=WP_176703805.1;transl_table=11 NZ_AP024167.1 RefSeq gene 80763 80987 . + . ID=gene-VA249_RS21900;Name=VA249_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21900;old_locus_tag=VYA_41700 NZ_AP024167.1 GeneMarkS-2+ CDS 80763 80987 . + 0 ID=cds-WP_176703804.1;Parent=gene-VA249_RS21900;Dbxref=Genbank:WP_176703804.1;Name=WP_176703804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21900;product=hypothetical protein;protein_id=WP_176703804.1;transl_table=11 NZ_AP024167.1 RefSeq gene 81296 82420 . + . ID=gene-VA249_RS21905;Name=VA249_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21905;old_locus_tag=VYA_41710 NZ_AP024167.1 Protein Homology CDS 81296 82420 . + 0 ID=cds-WP_176703803.1;Parent=gene-VA249_RS21905;Dbxref=Genbank:WP_176703803.1;Name=WP_176703803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012915.2;locus_tag=VA249_RS21905;product=hypothetical protein;protein_id=WP_176703803.1;transl_table=11 NZ_AP024167.1 RefSeq gene 82479 82805 . + . ID=gene-VA249_RS21910;Name=VA249_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21910;old_locus_tag=VYA_41720 NZ_AP024167.1 GeneMarkS-2+ CDS 82479 82805 . + 0 ID=cds-WP_176703802.1;Parent=gene-VA249_RS21910;Dbxref=Genbank:WP_176703802.1;Name=WP_176703802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21910;product=hypothetical protein;protein_id=WP_176703802.1;transl_table=11 NZ_AP024167.1 RefSeq gene 82847 84088 . - . ID=gene-VA249_RS21915;Name=VA249_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21915;old_locus_tag=VYA_41730 NZ_AP024167.1 GeneMarkS-2+ CDS 82847 84088 . - 0 ID=cds-WP_176703801.1;Parent=gene-VA249_RS21915;Dbxref=Genbank:WP_176703801.1;Name=WP_176703801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21915;product=hypothetical protein;protein_id=WP_176703801.1;transl_table=11 NZ_AP024167.1 RefSeq gene 84092 85384 . - . ID=gene-VA249_RS21920;Name=VA249_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21920;old_locus_tag=VYA_41740 NZ_AP024167.1 Protein Homology CDS 84092 85384 . - 0 ID=cds-WP_176703800.1;Parent=gene-VA249_RS21920;Dbxref=Genbank:WP_176703800.1;Name=WP_176703800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=VA249_RS21920;product=ParA family protein;protein_id=WP_176703800.1;transl_table=11 NZ_AP024167.1 RefSeq gene 85657 86133 . - . ID=gene-VA249_RS21925;Name=VA249_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21925;old_locus_tag=VYA_41750 NZ_AP024167.1 GeneMarkS-2+ CDS 85657 86133 . - 0 ID=cds-WP_176703799.1;Parent=gene-VA249_RS21925;Dbxref=Genbank:WP_176703799.1;Name=WP_176703799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21925;product=hypothetical protein;protein_id=WP_176703799.1;transl_table=11 NZ_AP024167.1 RefSeq gene 86496 86780 . + . ID=gene-VA249_RS21930;Name=VA249_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21930;old_locus_tag=VYA_41770 NZ_AP024167.1 GeneMarkS-2+ CDS 86496 86780 . + 0 ID=cds-WP_176703798.1;Parent=gene-VA249_RS21930;Dbxref=Genbank:WP_176703798.1;Name=WP_176703798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21930;product=hypothetical protein;protein_id=WP_176703798.1;transl_table=11 NZ_AP024167.1 RefSeq gene 87124 87822 . - . ID=gene-VA249_RS21935;Name=VA249_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21935;old_locus_tag=VYA_41780 NZ_AP024167.1 GeneMarkS-2+ CDS 87124 87822 . - 0 ID=cds-WP_176703797.1;Parent=gene-VA249_RS21935;Dbxref=Genbank:WP_176703797.1;Name=WP_176703797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21935;product=hypothetical protein;protein_id=WP_176703797.1;transl_table=11 NZ_AP024167.1 RefSeq gene 87966 88637 . - . ID=gene-VA249_RS21940;Name=VA249_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21940;old_locus_tag=VYA_41790 NZ_AP024167.1 GeneMarkS-2+ CDS 87966 88637 . - 0 ID=cds-WP_176703796.1;Parent=gene-VA249_RS21940;Dbxref=Genbank:WP_176703796.1;Name=WP_176703796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21940;product=hypothetical protein;protein_id=WP_176703796.1;transl_table=11 NZ_AP024167.1 RefSeq gene 88624 89742 . - . ID=gene-VA249_RS21945;Name=VA249_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21945;old_locus_tag=VYA_41800 NZ_AP024167.1 GeneMarkS-2+ CDS 88624 89742 . - 0 ID=cds-WP_176703795.1;Parent=gene-VA249_RS21945;Dbxref=Genbank:WP_176703795.1;Name=WP_176703795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21945;product=hypothetical protein;protein_id=WP_176703795.1;transl_table=11 NZ_AP024167.1 RefSeq gene 89752 90429 . - . ID=gene-VA249_RS21950;Name=VA249_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21950;old_locus_tag=VYA_41810 NZ_AP024167.1 GeneMarkS-2+ CDS 89752 90429 . - 0 ID=cds-WP_176703794.1;Parent=gene-VA249_RS21950;Dbxref=Genbank:WP_176703794.1;Name=WP_176703794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21950;product=hypothetical protein;protein_id=WP_176703794.1;transl_table=11 NZ_AP024167.1 RefSeq gene 90518 90952 . + . ID=gene-VA249_RS21955;Name=VA249_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21955;old_locus_tag=VYA_41820 NZ_AP024167.1 GeneMarkS-2+ CDS 90518 90952 . + 0 ID=cds-WP_176703793.1;Parent=gene-VA249_RS21955;Dbxref=Genbank:WP_176703793.1;Name=WP_176703793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21955;product=hypothetical protein;protein_id=WP_176703793.1;transl_table=11 NZ_AP024167.1 RefSeq gene 90965 92128 . - . ID=gene-VA249_RS21960;Name=VA249_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21960;old_locus_tag=VYA_41830 NZ_AP024167.1 GeneMarkS-2+ CDS 90965 92128 . - 0 ID=cds-WP_176703792.1;Parent=gene-VA249_RS21960;Dbxref=Genbank:WP_176703792.1;Name=WP_176703792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21960;product=hypothetical protein;protein_id=WP_176703792.1;transl_table=11 NZ_AP024167.1 RefSeq gene 92350 94419 . + . ID=gene-VA249_RS21965;Name=VA249_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21965;old_locus_tag=VYA_41840 NZ_AP024167.1 Protein Homology CDS 92350 94419 . + 0 ID=cds-WP_221072348.1;Parent=gene-VA249_RS21965;Dbxref=Genbank:WP_221072348.1;Name=WP_221072348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=VA249_RS21965;product=ATP-dependent DNA helicase;protein_id=WP_221072348.1;transl_table=11 NZ_AP024167.1 RefSeq gene 95688 95846 . + . ID=gene-VA249_RS21970;Name=VA249_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21970;old_locus_tag=VYA_41850 NZ_AP024167.1 GeneMarkS-2+ CDS 95688 95846 . + 0 ID=cds-WP_221072349.1;Parent=gene-VA249_RS21970;Dbxref=Genbank:WP_221072349.1;Name=WP_221072349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21970;product=hypothetical protein;protein_id=WP_221072349.1;transl_table=11 NZ_AP024167.1 RefSeq gene 95872 97872 . + . ID=gene-VA249_RS21975;Name=VA249_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21975;old_locus_tag=VYA_41860 NZ_AP024167.1 GeneMarkS-2+ CDS 95872 97872 . + 0 ID=cds-WP_176703790.1;Parent=gene-VA249_RS21975;Dbxref=Genbank:WP_176703790.1;Name=WP_176703790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21975;product=hypothetical protein;protein_id=WP_176703790.1;transl_table=11 NZ_AP024167.1 RefSeq gene 97926 98600 . + . ID=gene-VA249_RS21980;Name=VA249_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21980;old_locus_tag=VYA_41870 NZ_AP024167.1 GeneMarkS-2+ CDS 97926 98600 . + 0 ID=cds-WP_176703789.1;Parent=gene-VA249_RS21980;Dbxref=Genbank:WP_176703789.1;Name=WP_176703789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21980;product=hypothetical protein;protein_id=WP_176703789.1;transl_table=11 NZ_AP024167.1 RefSeq gene 98682 99461 . + . ID=gene-VA249_RS21985;Name=VA249_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21985;old_locus_tag=VYA_41880 NZ_AP024167.1 GeneMarkS-2+ CDS 98682 99461 . + 0 ID=cds-WP_221072350.1;Parent=gene-VA249_RS21985;Dbxref=Genbank:WP_221072350.1;Name=WP_221072350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21985;product=hypothetical protein;protein_id=WP_221072350.1;transl_table=11 NZ_AP024167.1 RefSeq gene 99586 100239 . + . ID=gene-VA249_RS21990;Name=VA249_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21990;old_locus_tag=VYA_41890 NZ_AP024167.1 GeneMarkS-2+ CDS 99586 100239 . + 0 ID=cds-WP_221072351.1;Parent=gene-VA249_RS21990;Dbxref=Genbank:WP_221072351.1;Name=WP_221072351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21990;product=hypothetical protein;protein_id=WP_221072351.1;transl_table=11 NZ_AP024167.1 RefSeq gene 100568 100735 . + . ID=gene-VA249_RS21995;Name=VA249_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS21995;old_locus_tag=VYA_41910 NZ_AP024167.1 GeneMarkS-2+ CDS 100568 100735 . + 0 ID=cds-WP_176703785.1;Parent=gene-VA249_RS21995;Dbxref=Genbank:WP_176703785.1;Name=WP_176703785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS21995;product=hypothetical protein;protein_id=WP_176703785.1;transl_table=11 NZ_AP024167.1 RefSeq gene 101072 101314 . + . ID=gene-VA249_RS22000;Name=VA249_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22000;old_locus_tag=VYA_41920 NZ_AP024167.1 GeneMarkS-2+ CDS 101072 101314 . + 0 ID=cds-WP_176703784.1;Parent=gene-VA249_RS22000;Dbxref=Genbank:WP_176703784.1;Name=WP_176703784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22000;product=hypothetical protein;protein_id=WP_176703784.1;transl_table=11 NZ_AP024167.1 RefSeq gene 101521 102675 . - . ID=gene-VA249_RS22005;Name=VA249_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22005;old_locus_tag=VYA_41930 NZ_AP024167.1 GeneMarkS-2+ CDS 101521 102675 . - 0 ID=cds-WP_221072352.1;Parent=gene-VA249_RS22005;Dbxref=Genbank:WP_221072352.1;Name=WP_221072352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22005;product=hypothetical protein;protein_id=WP_221072352.1;transl_table=11 NZ_AP024167.1 RefSeq gene 103022 103498 . + . ID=gene-VA249_RS22010;Name=VA249_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22010;old_locus_tag=VYA_41940 NZ_AP024167.1 Protein Homology CDS 103022 103498 . + 0 ID=cds-WP_176703782.1;Parent=gene-VA249_RS22010;Dbxref=Genbank:WP_176703782.1;Name=WP_176703782.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013995.2;locus_tag=VA249_RS22010;product=EVE domain-containing protein;protein_id=WP_176703782.1;transl_table=11 NZ_AP024167.1 RefSeq gene 103495 103860 . + . ID=gene-VA249_RS22015;Name=VA249_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22015;old_locus_tag=VYA_41950 NZ_AP024167.1 GeneMarkS-2+ CDS 103495 103860 . + 0 ID=cds-WP_176703781.1;Parent=gene-VA249_RS22015;Dbxref=Genbank:WP_176703781.1;Name=WP_176703781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22015;product=hypothetical protein;protein_id=WP_176703781.1;transl_table=11 NZ_AP024167.1 RefSeq gene 103860 104096 . + . ID=gene-VA249_RS22020;Name=VA249_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22020;old_locus_tag=VYA_41960 NZ_AP024167.1 GeneMarkS-2+ CDS 103860 104096 . + 0 ID=cds-WP_176703780.1;Parent=gene-VA249_RS22020;Dbxref=Genbank:WP_176703780.1;Name=WP_176703780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22020;product=hypothetical protein;protein_id=WP_176703780.1;transl_table=11 NZ_AP024167.1 RefSeq gene 104101 104598 . + . ID=gene-VA249_RS22025;Name=VA249_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22025;old_locus_tag=VYA_41970 NZ_AP024167.1 GeneMarkS-2+ CDS 104101 104598 . + 0 ID=cds-WP_176703779.1;Parent=gene-VA249_RS22025;Dbxref=Genbank:WP_176703779.1;Name=WP_176703779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22025;product=hypothetical protein;protein_id=WP_176703779.1;transl_table=11 NZ_AP024167.1 RefSeq gene 104666 104998 . + . ID=gene-VA249_RS22030;Name=VA249_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22030;old_locus_tag=VYA_41980 NZ_AP024167.1 GeneMarkS-2+ CDS 104666 104998 . + 0 ID=cds-WP_176703778.1;Parent=gene-VA249_RS22030;Dbxref=Genbank:WP_176703778.1;Name=WP_176703778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22030;product=hypothetical protein;protein_id=WP_176703778.1;transl_table=11 NZ_AP024167.1 RefSeq gene 105077 105529 . + . ID=gene-VA249_RS22035;Name=VA249_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22035;old_locus_tag=VYA_41990 NZ_AP024167.1 GeneMarkS-2+ CDS 105077 105529 . + 0 ID=cds-WP_176703777.1;Parent=gene-VA249_RS22035;Dbxref=Genbank:WP_176703777.1;Name=WP_176703777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22035;product=hypothetical protein;protein_id=WP_176703777.1;transl_table=11 NZ_AP024167.1 RefSeq gene 105856 108777 . + . ID=gene-VA249_RS22040;Name=VA249_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22040;old_locus_tag=VYA_42000 NZ_AP024167.1 GeneMarkS-2+ CDS 105856 108777 . + 0 ID=cds-WP_176703775.1;Parent=gene-VA249_RS22040;Dbxref=Genbank:WP_176703775.1;Name=WP_176703775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22040;product=hypothetical protein;protein_id=WP_176703775.1;transl_table=11 NZ_AP024167.1 RefSeq gene 108833 110056 . + . ID=gene-VA249_RS22045;Name=VA249_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22045;old_locus_tag=VYA_42010 NZ_AP024167.1 Protein Homology CDS 108833 110056 . + 0 ID=cds-WP_176703774.1;Parent=gene-VA249_RS22045;Dbxref=Genbank:WP_176703774.1;Name=WP_176703774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025438.2;locus_tag=VA249_RS22045;product=DNA sulfur modification protein DndB;protein_id=WP_176703774.1;transl_table=11 NZ_AP024167.1 RefSeq gene 110046 110699 . + . ID=gene-VA249_RS22050;Name=VA249_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22050;old_locus_tag=VYA_42020 NZ_AP024167.1 GeneMarkS-2+ CDS 110046 110699 . + 0 ID=cds-WP_176703773.1;Parent=gene-VA249_RS22050;Dbxref=Genbank:WP_176703773.1;Name=WP_176703773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22050;product=hypothetical protein;protein_id=WP_176703773.1;transl_table=11 NZ_AP024167.1 RefSeq gene 110775 112016 . + . ID=gene-VA249_RS22055;Name=VA249_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22055;old_locus_tag=VYA_42030 NZ_AP024167.1 Protein Homology CDS 110775 112016 . + 0 ID=cds-WP_176703772.1;Parent=gene-VA249_RS22055;Dbxref=Genbank:WP_176703772.1;Name=WP_176703772.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=VA249_RS22055;product=S8 family serine peptidase;protein_id=WP_176703772.1;transl_table=11 NZ_AP024167.1 RefSeq gene 112031 112258 . + . ID=gene-VA249_RS22060;Name=VA249_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22060;old_locus_tag=VYA_42040 NZ_AP024167.1 GeneMarkS-2+ CDS 112031 112258 . + 0 ID=cds-WP_176703771.1;Parent=gene-VA249_RS22060;Dbxref=Genbank:WP_176703771.1;Name=WP_176703771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22060;product=hypothetical protein;protein_id=WP_176703771.1;transl_table=11 NZ_AP024167.1 RefSeq gene 112408 112533 . + . ID=gene-VA249_RS24235;Name=VA249_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24235 NZ_AP024167.1 GeneMarkS-2+ CDS 112408 112533 . + 0 ID=cds-WP_256997343.1;Parent=gene-VA249_RS24235;Dbxref=Genbank:WP_256997343.1;Name=WP_256997343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS24235;product=hypothetical protein;protein_id=WP_256997343.1;transl_table=11 NZ_AP024167.1 RefSeq gene 112580 112915 . + . ID=gene-VA249_RS22065;Name=VA249_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22065;old_locus_tag=VYA_42050 NZ_AP024167.1 GeneMarkS-2+ CDS 112580 112915 . + 0 ID=cds-WP_221072353.1;Parent=gene-VA249_RS22065;Dbxref=Genbank:WP_221072353.1;Name=WP_221072353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22065;product=hypothetical protein;protein_id=WP_221072353.1;transl_table=11 NZ_AP024167.1 RefSeq gene 112983 114440 . + . ID=gene-VA249_RS22070;Name=VA249_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22070;old_locus_tag=VYA_42060 NZ_AP024167.1 Protein Homology CDS 112983 114440 . + 0 ID=cds-WP_176703769.1;Parent=gene-VA249_RS22070;Dbxref=Genbank:WP_176703769.1;Name=WP_176703769.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019615501.1;locus_tag=VA249_RS22070;product=DNA cytosine methyltransferase;protein_id=WP_176703769.1;transl_table=11 NZ_AP024167.1 RefSeq gene 114701 114913 . + . ID=gene-VA249_RS22075;Name=VA249_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22075;old_locus_tag=VYA_42080 NZ_AP024167.1 GeneMarkS-2+ CDS 114701 114913 . + 0 ID=cds-WP_176703767.1;Parent=gene-VA249_RS22075;Dbxref=Genbank:WP_176703767.1;Name=WP_176703767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22075;product=hypothetical protein;protein_id=WP_176703767.1;transl_table=11 NZ_AP024167.1 RefSeq gene 114969 115670 . + . ID=gene-VA249_RS22080;Name=VA249_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22080;old_locus_tag=VYA_42090 NZ_AP024167.1 GeneMarkS-2+ CDS 114969 115670 . + 0 ID=cds-WP_176703766.1;Parent=gene-VA249_RS22080;Dbxref=Genbank:WP_176703766.1;Name=WP_176703766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22080;product=adenylosuccinate synthase;protein_id=WP_176703766.1;transl_table=11 NZ_AP024167.1 RefSeq gene 115698 115919 . - . ID=gene-VA249_RS22085;Name=VA249_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22085;old_locus_tag=VYA_42100 NZ_AP024167.1 GeneMarkS-2+ CDS 115698 115919 . - 0 ID=cds-WP_176703765.1;Parent=gene-VA249_RS22085;Dbxref=Genbank:WP_176703765.1;Name=WP_176703765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22085;product=hypothetical protein;protein_id=WP_176703765.1;transl_table=11 NZ_AP024167.1 RefSeq gene 115919 116044 . - . ID=gene-VA249_RS24240;Name=VA249_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24240 NZ_AP024167.1 GeneMarkS-2+ CDS 115919 116044 . - 0 ID=cds-WP_256997344.1;Parent=gene-VA249_RS24240;Dbxref=Genbank:WP_256997344.1;Name=WP_256997344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS24240;product=hypothetical protein;protein_id=WP_256997344.1;transl_table=11 NZ_AP024167.1 RefSeq gene 116311 116511 . - . ID=gene-VA249_RS22090;Name=VA249_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22090;old_locus_tag=VYA_42110 NZ_AP024167.1 Protein Homology CDS 116311 116511 . - 0 ID=cds-WP_176703764.1;Parent=gene-VA249_RS22090;Dbxref=Genbank:WP_176703764.1;Name=WP_176703764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087140.1;locus_tag=VA249_RS22090;product=hypothetical protein;protein_id=WP_176703764.1;transl_table=11 NZ_AP024167.1 RefSeq gene 116665 117171 . + . ID=gene-VA249_RS22095;Name=VA249_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22095;old_locus_tag=VYA_42120 NZ_AP024167.1 Protein Homology CDS 116665 117171 . + 0 ID=cds-WP_176703763.1;Parent=gene-VA249_RS22095;Dbxref=Genbank:WP_176703763.1;Name=WP_176703763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756239.1;locus_tag=VA249_RS22095;product=DUF262 domain-containing protein;protein_id=WP_176703763.1;transl_table=11 NZ_AP024167.1 RefSeq gene 117476 117772 . + . ID=gene-VA249_RS22100;Name=VA249_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22100;old_locus_tag=VYA_42130 NZ_AP024167.1 GeneMarkS-2+ CDS 117476 117772 . + 0 ID=cds-WP_176703762.1;Parent=gene-VA249_RS22100;Dbxref=Genbank:WP_176703762.1;Name=WP_176703762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22100;product=hypothetical protein;protein_id=WP_176703762.1;transl_table=11 NZ_AP024167.1 RefSeq gene 117871 118284 . + . ID=gene-VA249_RS22105;Name=VA249_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22105;old_locus_tag=VYA_42140 NZ_AP024167.1 Protein Homology CDS 117871 118284 . + 0 ID=cds-WP_176703761.1;Parent=gene-VA249_RS22105;Dbxref=Genbank:WP_176703761.1;Name=WP_176703761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011876190.1;locus_tag=VA249_RS22105;product=DUF2591 family protein;protein_id=WP_176703761.1;transl_table=11 NZ_AP024167.1 RefSeq gene 118352 118504 . + . ID=gene-VA249_RS22110;Name=VA249_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22110;old_locus_tag=VYA_42150 NZ_AP024167.1 GeneMarkS-2+ CDS 118352 118504 . + 0 ID=cds-WP_176703760.1;Parent=gene-VA249_RS22110;Dbxref=Genbank:WP_176703760.1;Name=WP_176703760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22110;product=hypothetical protein;protein_id=WP_176703760.1;transl_table=11 NZ_AP024167.1 RefSeq gene 118676 119926 . + . ID=gene-VA249_RS22115;Name=VA249_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22115;old_locus_tag=VYA_42160 NZ_AP024167.1 Protein Homology CDS 118676 119926 . + 0 ID=cds-WP_176703759.1;Parent=gene-VA249_RS22115;Dbxref=Genbank:WP_176703759.1;Name=WP_176703759.1;Ontology_term=GO:0003676,GO:0016787,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013395.2;locus_tag=VA249_RS22115;product=DNA/RNA non-specific endonuclease;protein_id=WP_176703759.1;transl_table=11 NZ_AP024167.1 RefSeq gene 119960 120268 . - . ID=gene-VA249_RS22120;Name=VA249_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22120;old_locus_tag=VYA_42170 NZ_AP024167.1 GeneMarkS-2+ CDS 119960 120268 . - 0 ID=cds-WP_176703758.1;Parent=gene-VA249_RS22120;Dbxref=Genbank:WP_176703758.1;Name=WP_176703758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22120;product=hypothetical protein;protein_id=WP_176703758.1;transl_table=11 NZ_AP024167.1 RefSeq gene 120397 121398 . + . ID=gene-VA249_RS22125;Name=VA249_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22125;old_locus_tag=VYA_42180 NZ_AP024167.1 GeneMarkS-2+ CDS 120397 121398 . + 0 ID=cds-WP_176703757.1;Parent=gene-VA249_RS22125;Dbxref=Genbank:WP_176703757.1;Name=WP_176703757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22125;product=class I SAM-dependent methyltransferase;protein_id=WP_176703757.1;transl_table=11 NZ_AP024167.1 RefSeq gene 121716 122051 . - . ID=gene-VA249_RS22130;Name=VA249_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22130;old_locus_tag=VYA_42190 NZ_AP024167.1 GeneMarkS-2+ CDS 121716 122051 . - 0 ID=cds-WP_176703756.1;Parent=gene-VA249_RS22130;Dbxref=Genbank:WP_176703756.1;Name=WP_176703756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22130;product=hypothetical protein;protein_id=WP_176703756.1;transl_table=11 NZ_AP024167.1 RefSeq gene 122113 122397 . - . ID=gene-VA249_RS22135;Name=VA249_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22135;old_locus_tag=VYA_42200 NZ_AP024167.1 Protein Homology CDS 122113 122397 . - 0 ID=cds-WP_176703755.1;Parent=gene-VA249_RS22135;Dbxref=Genbank:WP_176703755.1;Name=WP_176703755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015832760.1;locus_tag=VA249_RS22135;product=GIY-YIG nuclease family protein;protein_id=WP_176703755.1;transl_table=11 NZ_AP024167.1 RefSeq gene 122633 123322 . + . ID=gene-VA249_RS22140;Name=VA249_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22140;old_locus_tag=VYA_42210 NZ_AP024167.1 Protein Homology CDS 122633 123322 . + 0 ID=cds-WP_176703754.1;Parent=gene-VA249_RS22140;Dbxref=Genbank:WP_176703754.1;Name=WP_176703754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025085.2;locus_tag=VA249_RS22140;product=DUF4942 domain-containing protein;protein_id=WP_176703754.1;transl_table=11 NZ_AP024167.1 RefSeq gene 123385 124752 . + . ID=gene-VA249_RS22145;Name=VA249_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22145;old_locus_tag=VYA_42220 NZ_AP024167.1 Protein Homology CDS 123385 124752 . + 0 ID=cds-WP_176703753.1;Parent=gene-VA249_RS22145;Dbxref=Genbank:WP_176703753.1;Name=WP_176703753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013252.2;locus_tag=VA249_RS22145;product=hypothetical protein;protein_id=WP_176703753.1;transl_table=11 NZ_AP024167.1 RefSeq gene 124784 125008 . + . ID=gene-VA249_RS22150;Name=VA249_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22150;old_locus_tag=VYA_42230 NZ_AP024167.1 GeneMarkS-2+ CDS 124784 125008 . + 0 ID=cds-WP_176703752.1;Parent=gene-VA249_RS22150;Dbxref=Genbank:WP_176703752.1;Name=WP_176703752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22150;product=hypothetical protein;protein_id=WP_176703752.1;transl_table=11 NZ_AP024167.1 RefSeq gene 125365 125934 . - . ID=gene-VA249_RS22155;Name=VA249_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22155 NZ_AP024167.1 GeneMarkS-2+ CDS 125365 125934 . - 0 ID=cds-WP_176703750.1;Parent=gene-VA249_RS22155;Dbxref=Genbank:WP_176703750.1;Name=WP_176703750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22155;product=hypothetical protein;protein_id=WP_176703750.1;transl_table=11 NZ_AP024167.1 RefSeq gene 125924 126253 . - . ID=gene-VA249_RS22160;Name=VA249_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22160;old_locus_tag=VYA_42240 NZ_AP024167.1 GeneMarkS-2+ CDS 125924 126253 . - 0 ID=cds-WP_176703749.1;Parent=gene-VA249_RS22160;Dbxref=Genbank:WP_176703749.1;Name=WP_176703749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22160;product=hypothetical protein;protein_id=WP_176703749.1;transl_table=11 NZ_AP024167.1 RefSeq gene 126354 127040 . + . ID=gene-VA249_RS22165;Name=VA249_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22165;old_locus_tag=VYA_42250 NZ_AP024167.1 GeneMarkS-2+ CDS 126354 127040 . + 0 ID=cds-WP_176703748.1;Parent=gene-VA249_RS22165;Dbxref=Genbank:WP_176703748.1;Name=WP_176703748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22165;product=hypothetical protein;protein_id=WP_176703748.1;transl_table=11 NZ_AP024167.1 RefSeq gene 127052 127564 . + . ID=gene-VA249_RS22170;Name=VA249_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22170;old_locus_tag=VYA_42260 NZ_AP024167.1 GeneMarkS-2+ CDS 127052 127564 . + 0 ID=cds-WP_176703747.1;Parent=gene-VA249_RS22170;Dbxref=Genbank:WP_176703747.1;Name=WP_176703747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22170;product=hypothetical protein;protein_id=WP_176703747.1;transl_table=11 NZ_AP024167.1 RefSeq gene 127647 128615 . + . ID=gene-VA249_RS22175;Name=VA249_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22175;old_locus_tag=VYA_42270 NZ_AP024167.1 GeneMarkS-2+ CDS 127647 128615 . + 0 ID=cds-WP_176703746.1;Parent=gene-VA249_RS22175;Dbxref=Genbank:WP_176703746.1;Name=WP_176703746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22175;product=hypothetical protein;protein_id=WP_176703746.1;transl_table=11 NZ_AP024167.1 RefSeq gene 128678 133873 . - . ID=gene-VA249_RS22180;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=VA249_RS22180;old_locus_tag=VYA_42280 NZ_AP024167.1 Protein Homology CDS 128678 133873 . - 0 ID=cds-WP_176703745.1;Parent=gene-VA249_RS22180;Dbxref=Genbank:WP_176703745.1;Name=WP_176703745.1;gbkey=CDS;gene=traN;inference=COORDINATES: protein motif:HMM:NF018666.2;locus_tag=VA249_RS22180;product=conjugal transfer protein TraN;protein_id=WP_176703745.1;transl_table=11 NZ_AP024167.1 RefSeq gene 134003 134776 . - . ID=gene-VA249_RS22185;Name=VA249_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22185;old_locus_tag=VYA_42290 NZ_AP024167.1 GeneMarkS-2+ CDS 134003 134776 . - 0 ID=cds-WP_221072354.1;Parent=gene-VA249_RS22185;Dbxref=Genbank:WP_221072354.1;Name=WP_221072354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22185;product=hypothetical protein;protein_id=WP_221072354.1;transl_table=11 NZ_AP024167.1 RefSeq gene 134776 136878 . - . ID=gene-VA249_RS22190;Name=VA249_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22190;old_locus_tag=VYA_42300 NZ_AP024167.1 Protein Homology CDS 134776 136878 . - 0 ID=cds-WP_221072356.1;Parent=gene-VA249_RS22190;Dbxref=Genbank:WP_221072356.1;Name=WP_221072356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=VA249_RS22190;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_221072356.1;transl_table=11 NZ_AP024167.1 RefSeq gene 136975 137664 . - . ID=gene-VA249_RS22195;Name=VA249_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22195;old_locus_tag=VYA_42310 NZ_AP024167.1 GeneMarkS-2+ CDS 136975 137664 . - 0 ID=cds-WP_176703742.1;Parent=gene-VA249_RS22195;Dbxref=Genbank:WP_176703742.1;Name=WP_176703742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22195;product=hypothetical protein;protein_id=WP_176703742.1;transl_table=11 NZ_AP024167.1 RefSeq gene 137661 138041 . - . ID=gene-VA249_RS22200;Name=VA249_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22200;old_locus_tag=VYA_42320 NZ_AP024167.1 GeneMarkS-2+ CDS 137661 138041 . - 0 ID=cds-WP_176703741.1;Parent=gene-VA249_RS22200;Dbxref=Genbank:WP_176703741.1;Name=WP_176703741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22200;product=hypothetical protein;protein_id=WP_176703741.1;transl_table=11 NZ_AP024167.1 RefSeq gene 138096 139916 . - . ID=gene-VA249_RS22205;Name=VA249_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22205;old_locus_tag=VYA_42330 NZ_AP024167.1 Protein Homology CDS 138096 139916 . - 0 ID=cds-WP_176703740.1;Parent=gene-VA249_RS22205;Dbxref=Genbank:WP_176703740.1;Name=WP_176703740.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024754.2;locus_tag=VA249_RS22205;product=ATP-dependent helicase;protein_id=WP_176703740.1;transl_table=11 NZ_AP024167.1 RefSeq gene 139909 140460 . - . ID=gene-VA249_RS22210;Name=VA249_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22210;old_locus_tag=VYA_42340 NZ_AP024167.1 GeneMarkS-2+ CDS 139909 140460 . - 0 ID=cds-WP_176703739.1;Parent=gene-VA249_RS22210;Dbxref=Genbank:WP_176703739.1;Name=WP_176703739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22210;product=hypothetical protein;protein_id=WP_176703739.1;transl_table=11 NZ_AP024167.1 RefSeq gene 141343 142962 . + . ID=gene-VA249_RS22215;Name=VA249_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22215;old_locus_tag=VYA_42350 NZ_AP024167.1 GeneMarkS-2+ CDS 141343 142962 . + 0 ID=cds-WP_176703738.1;Parent=gene-VA249_RS22215;Dbxref=Genbank:WP_176703738.1;Name=WP_176703738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22215;product=hypothetical protein;protein_id=WP_176703738.1;transl_table=11 NZ_AP024167.1 RefSeq gene 143205 143906 . + . ID=gene-VA249_RS22220;Name=VA249_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22220;old_locus_tag=VYA_42370 NZ_AP024167.1 GeneMarkS-2+ CDS 143205 143906 . + 0 ID=cds-WP_221072358.1;Parent=gene-VA249_RS22220;Dbxref=Genbank:WP_221072358.1;Name=WP_221072358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22220;product=hypothetical protein;protein_id=WP_221072358.1;transl_table=11 NZ_AP024167.1 RefSeq gene 144512 144997 . + . ID=gene-VA249_RS22225;Name=VA249_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22225;old_locus_tag=VYA_42380 NZ_AP024167.1 GeneMarkS-2+ CDS 144512 144997 . + 0 ID=cds-WP_176703735.1;Parent=gene-VA249_RS22225;Dbxref=Genbank:WP_176703735.1;Name=WP_176703735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22225;product=hypothetical protein;protein_id=WP_176703735.1;transl_table=11 NZ_AP024167.1 RefSeq gene 145025 145357 . + . ID=gene-VA249_RS22230;Name=VA249_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22230;old_locus_tag=VYA_42390 NZ_AP024167.1 GeneMarkS-2+ CDS 145025 145357 . + 0 ID=cds-WP_176703734.1;Parent=gene-VA249_RS22230;Dbxref=Genbank:WP_176703734.1;Name=WP_176703734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22230;product=pili assembly chaperone;protein_id=WP_176703734.1;transl_table=11 NZ_AP024167.1 RefSeq gene 145429 147960 . + . ID=gene-VA249_RS22235;Name=VA249_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22235;old_locus_tag=VYA_42400 NZ_AP024167.1 Protein Homology CDS 145429 147960 . + 0 ID=cds-WP_176703733.1;Parent=gene-VA249_RS22235;Dbxref=Genbank:WP_176703733.1;Name=WP_176703733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024254.2;locus_tag=VA249_RS22235;product=TraC family protein;protein_id=WP_176703733.1;transl_table=11 NZ_AP024167.1 RefSeq gene 148072 148488 . + . ID=gene-VA249_RS22240;Name=VA249_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22240;old_locus_tag=VYA_42410 NZ_AP024167.1 GeneMarkS-2+ CDS 148072 148488 . + 0 ID=cds-WP_176703732.1;Parent=gene-VA249_RS22240;Dbxref=Genbank:WP_176703732.1;Name=WP_176703732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22240;product=hypothetical protein;protein_id=WP_176703732.1;transl_table=11 NZ_AP024167.1 RefSeq gene 148491 149012 . + . ID=gene-VA249_RS22245;Name=VA249_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22245;old_locus_tag=VYA_42420 NZ_AP024167.1 Protein Homology CDS 148491 149012 . + 0 ID=cds-WP_176703731.1;Parent=gene-VA249_RS22245;Dbxref=Genbank:WP_176703731.1;Name=WP_176703731.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021981.2;locus_tag=VA249_RS22245;product=S26 family signal peptidase;protein_id=WP_176703731.1;transl_table=11 NZ_AP024167.1 RefSeq gene 149023 150342 . + . ID=gene-VA249_RS22250;Name=VA249_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22250;old_locus_tag=VYA_42430 NZ_AP024167.1 Protein Homology CDS 149023 150342 . + 0 ID=cds-WP_176703730.1;Parent=gene-VA249_RS22250;Dbxref=Genbank:WP_176703730.1;Name=WP_176703730.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021209.2;locus_tag=VA249_RS22250;product=TrbC family F-type conjugative pilus assembly protein;protein_id=WP_176703730.1;transl_table=11 NZ_AP024167.1 RefSeq gene 150339 151535 . + . ID=gene-VA249_RS22255;Name=VA249_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22255;old_locus_tag=VYA_42440 NZ_AP024167.1 Protein Homology CDS 150339 151535 . + 0 ID=cds-WP_176703729.1;Parent=gene-VA249_RS22255;Dbxref=Genbank:WP_176703729.1;Name=WP_176703729.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018536.2;locus_tag=VA249_RS22255;product=TraU family protein;protein_id=WP_176703729.1;transl_table=11 NZ_AP024167.1 RefSeq gene 151875 152339 . + . ID=gene-VA249_RS22260;Name=VA249_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22260;old_locus_tag=VYA_42450 NZ_AP024167.1 Protein Homology CDS 151875 152339 . + 0 ID=cds-WP_221072359.1;Parent=gene-VA249_RS22260;Dbxref=Genbank:WP_221072359.1;Name=WP_221072359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024776.2;locus_tag=VA249_RS22260;product=helix-turn-helix domain-containing protein;protein_id=WP_221072359.1;transl_table=11 NZ_AP024167.1 RefSeq gene 152367 153587 . + . ID=gene-VA249_RS22265;Name=VA249_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22265;old_locus_tag=VYA_42460 NZ_AP024167.1 GeneMarkS-2+ CDS 152367 153587 . + 0 ID=cds-WP_176703727.1;Parent=gene-VA249_RS22265;Dbxref=Genbank:WP_176703727.1;Name=WP_176703727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22265;product=hypothetical protein;protein_id=WP_176703727.1;transl_table=11 NZ_AP024167.1 RefSeq gene 153638 154318 . - . ID=gene-VA249_RS22270;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=VA249_RS22270;old_locus_tag=VYA_42470 NZ_AP024167.1 Protein Homology CDS 153638 154318 . - 0 ID=cds-WP_176703726.1;Parent=gene-VA249_RS22270;Dbxref=Genbank:WP_176703726.1;Name=WP_176703726.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:TIGR02227.1;locus_tag=VA249_RS22270;product=signal peptidase I;protein_id=WP_176703726.1;transl_table=11 NZ_AP024167.1 RefSeq gene 154321 154689 . - . ID=gene-VA249_RS22275;Name=VA249_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22275;old_locus_tag=VYA_42480 NZ_AP024167.1 GeneMarkS-2+ CDS 154321 154689 . - 0 ID=cds-WP_176703725.1;Parent=gene-VA249_RS22275;Dbxref=Genbank:WP_176703725.1;Name=WP_176703725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22275;product=hypothetical protein;protein_id=WP_176703725.1;transl_table=11 NZ_AP024167.1 RefSeq gene 154700 155692 . - . ID=gene-VA249_RS22280;Name=VA249_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22280;old_locus_tag=VYA_42490 NZ_AP024167.1 GeneMarkS-2+ CDS 154700 155692 . - 0 ID=cds-WP_176703724.1;Parent=gene-VA249_RS22280;Dbxref=Genbank:WP_176703724.1;Name=WP_176703724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22280;product=hypothetical protein;protein_id=WP_176703724.1;transl_table=11 NZ_AP024167.1 RefSeq gene 155686 156753 . - . ID=gene-VA249_RS22285;Name=VA249_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22285;old_locus_tag=VYA_42500 NZ_AP024167.1 GeneMarkS-2+ CDS 155686 156753 . - 0 ID=cds-WP_221072360.1;Parent=gene-VA249_RS22285;Dbxref=Genbank:WP_221072360.1;Name=WP_221072360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22285;product=hypothetical protein;protein_id=WP_221072360.1;transl_table=11 NZ_AP024167.1 RefSeq gene 156753 158723 . - . ID=gene-VA249_RS22290;Name=VA249_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22290;old_locus_tag=VYA_42510 NZ_AP024167.1 Protein Homology CDS 156753 158723 . - 0 ID=cds-WP_176703722.1;Parent=gene-VA249_RS22290;Dbxref=Genbank:WP_176703722.1;Name=WP_176703722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03743.1;locus_tag=VA249_RS22290;product=conjugative transfer system coupling protein TraD;protein_id=WP_176703722.1;transl_table=11 NZ_AP024167.1 RefSeq gene 158724 160814 . - . ID=gene-VA249_RS22295;Name=VA249_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22295;old_locus_tag=VYA_42520 NZ_AP024167.1 Protein Homology CDS 158724 160814 . - 0 ID=cds-WP_176703721.1;Parent=gene-VA249_RS22295;Dbxref=Genbank:WP_176703721.1;Name=WP_176703721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019153.2;locus_tag=VA249_RS22295;product=TraI domain-containing protein;protein_id=WP_176703721.1;transl_table=11 NZ_AP024167.1 RefSeq gene 160932 161696 . - . ID=gene-VA249_RS22300;Name=VA249_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22300;old_locus_tag=VYA_42530 NZ_AP024167.1 GeneMarkS-2+ CDS 160932 161696 . - 0 ID=cds-WP_176703720.1;Parent=gene-VA249_RS22300;Dbxref=Genbank:WP_176703720.1;Name=WP_176703720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22300;product=hypothetical protein;protein_id=WP_176703720.1;transl_table=11 NZ_AP024167.1 RefSeq gene 161686 162084 . - . ID=gene-VA249_RS22305;Name=VA249_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22305;old_locus_tag=VYA_42540 NZ_AP024167.1 GeneMarkS-2+ CDS 161686 162084 . - 0 ID=cds-WP_176703719.1;Parent=gene-VA249_RS22305;Dbxref=Genbank:WP_176703719.1;Name=WP_176703719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22305;product=hypothetical protein;protein_id=WP_176703719.1;transl_table=11 NZ_AP024167.1 RefSeq gene 162081 162665 . - . ID=gene-VA249_RS22310;Name=VA249_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22310;old_locus_tag=VYA_42550 NZ_AP024167.1 GeneMarkS-2+ CDS 162081 162665 . - 0 ID=cds-WP_176703718.1;Parent=gene-VA249_RS22310;Dbxref=Genbank:WP_176703718.1;Name=WP_176703718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22310;product=hypothetical protein;protein_id=WP_176703718.1;transl_table=11 NZ_AP024167.1 RefSeq gene 162681 164393 . - . ID=gene-VA249_RS22315;Name=VA249_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22315;old_locus_tag=VYA_42560 NZ_AP024167.1 Protein Homology CDS 162681 164393 . - 0 ID=cds-WP_176703717.1;Parent=gene-VA249_RS22315;Dbxref=Genbank:WP_176703717.1;Name=WP_176703717.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012321.2;locus_tag=VA249_RS22315;product=VWA domain-containing protein;protein_id=WP_176703717.1;transl_table=11 NZ_AP024167.1 RefSeq gene 164465 165505 . - . ID=gene-VA249_RS22320;Name=VA249_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22320;old_locus_tag=VYA_42570 NZ_AP024167.1 Protein Homology CDS 164465 165505 . - 0 ID=cds-WP_176703716.1;Parent=gene-VA249_RS22320;Dbxref=Genbank:WP_176703716.1;Name=WP_176703716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022792.2;locus_tag=VA249_RS22320;product=DUF3150 domain-containing protein;protein_id=WP_176703716.1;transl_table=11 NZ_AP024167.1 RefSeq gene 165584 166198 . - . ID=gene-VA249_RS22325;Name=VA249_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22325;old_locus_tag=VYA_42580 NZ_AP024167.1 GeneMarkS-2+ CDS 165584 166198 . - 0 ID=cds-WP_176703715.1;Parent=gene-VA249_RS22325;Dbxref=Genbank:WP_176703715.1;Name=WP_176703715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22325;product=hypothetical protein;protein_id=WP_176703715.1;transl_table=11 NZ_AP024167.1 RefSeq gene 166198 167193 . - . ID=gene-VA249_RS22330;Name=VA249_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22330;old_locus_tag=VYA_42590 NZ_AP024167.1 Protein Homology CDS 166198 167193 . - 0 ID=cds-WP_176703714.1;Parent=gene-VA249_RS22330;Dbxref=Genbank:WP_176703714.1;Name=WP_176703714.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019348.2;locus_tag=VA249_RS22330;product=AAA family ATPase;protein_id=WP_176703714.1;transl_table=11 NZ_AP024167.1 RefSeq gene 167284 168195 . - . ID=gene-VA249_RS22335;Name=VA249_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22335;old_locus_tag=VYA_42600 NZ_AP024167.1 Protein Homology CDS 167284 168195 . - 0 ID=cds-WP_176703713.1;Parent=gene-VA249_RS22335;Dbxref=Genbank:WP_176703713.1;Name=WP_176703713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024117.2;locus_tag=VA249_RS22335;product=PD-(D/E)XK nuclease family protein;protein_id=WP_176703713.1;transl_table=11 NZ_AP024167.1 RefSeq gene 168206 169501 . - . ID=gene-VA249_RS22340;Name=VA249_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22340;old_locus_tag=VYA_42610 NZ_AP024167.1 GeneMarkS-2+ CDS 168206 169501 . - 0 ID=cds-WP_176703712.1;Parent=gene-VA249_RS22340;Dbxref=Genbank:WP_176703712.1;Name=WP_176703712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22340;product=hypothetical protein;protein_id=WP_176703712.1;transl_table=11 NZ_AP024167.1 RefSeq gene 169682 170164 . - . ID=gene-VA249_RS22345;Name=VA249_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22345;old_locus_tag=VYA_42620 NZ_AP024167.1 GeneMarkS-2+ CDS 169682 170164 . - 0 ID=cds-WP_176703711.1;Parent=gene-VA249_RS22345;Dbxref=Genbank:WP_176703711.1;Name=WP_176703711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22345;product=hypothetical protein;protein_id=WP_176703711.1;transl_table=11 NZ_AP024167.1 RefSeq gene 170168 170437 . - . ID=gene-VA249_RS22350;Name=VA249_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22350;old_locus_tag=VYA_42630 NZ_AP024167.1 GeneMarkS-2+ CDS 170168 170437 . - 0 ID=cds-WP_221072299.1;Parent=gene-VA249_RS22350;Dbxref=Genbank:WP_221072299.1;Name=WP_221072299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22350;product=hypothetical protein;protein_id=WP_221072299.1;transl_table=11 NZ_AP024167.1 RefSeq gene 170403 171992 . - . ID=gene-VA249_RS22355;Name=VA249_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22355;old_locus_tag=VYA_42640 NZ_AP024167.1 GeneMarkS-2+ CDS 170403 171992 . - 0 ID=cds-WP_176703709.1;Parent=gene-VA249_RS22355;Dbxref=Genbank:WP_176703709.1;Name=WP_176703709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22355;product=hypothetical protein;protein_id=WP_176703709.1;transl_table=11 NZ_AP024167.1 RefSeq gene 172263 173120 . + . ID=gene-VA249_RS22360;Name=VA249_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22360;old_locus_tag=VYA_42650 NZ_AP024167.1 GeneMarkS-2+ CDS 172263 173120 . + 0 ID=cds-WP_176703708.1;Parent=gene-VA249_RS22360;Dbxref=Genbank:WP_176703708.1;Name=WP_176703708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22360;product=hypothetical protein;protein_id=WP_176703708.1;transl_table=11 NZ_AP024167.1 RefSeq gene 173123 174202 . + . ID=gene-VA249_RS22365;Name=VA249_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22365;old_locus_tag=VYA_42660 NZ_AP024167.1 GeneMarkS-2+ CDS 173123 174202 . + 0 ID=cds-WP_176703707.1;Parent=gene-VA249_RS22365;Dbxref=Genbank:WP_176703707.1;Name=WP_176703707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22365;product=hypothetical protein;protein_id=WP_176703707.1;transl_table=11 NZ_AP024167.1 RefSeq gene 174268 174939 . - . ID=gene-VA249_RS22370;Name=VA249_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22370;old_locus_tag=VYA_42670 NZ_AP024167.1 GeneMarkS-2+ CDS 174268 174939 . - 0 ID=cds-WP_176703706.1;Parent=gene-VA249_RS22370;Dbxref=Genbank:WP_176703706.1;Name=WP_176703706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22370;product=hypothetical protein;protein_id=WP_176703706.1;transl_table=11 NZ_AP024167.1 RefSeq gene 174941 176371 . - . ID=gene-VA249_RS22375;Name=VA249_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22375;old_locus_tag=VYA_42680 NZ_AP024167.1 Protein Homology CDS 174941 176371 . - 0 ID=cds-WP_176703705.1;Parent=gene-VA249_RS22375;Dbxref=Genbank:WP_176703705.1;Name=WP_176703705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015688.2;locus_tag=VA249_RS22375;product=hypothetical protein;protein_id=WP_176703705.1;transl_table=11 NZ_AP024167.1 RefSeq gene 176368 177219 . - . ID=gene-VA249_RS22380;Name=VA249_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22380;old_locus_tag=VYA_42690 NZ_AP024167.1 GeneMarkS-2+ CDS 176368 177219 . - 0 ID=cds-WP_176703704.1;Parent=gene-VA249_RS22380;Dbxref=Genbank:WP_176703704.1;Name=WP_176703704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22380;product=type-F conjugative transfer system secretin TraK;protein_id=WP_176703704.1;transl_table=11 NZ_AP024167.1 RefSeq gene 177134 177703 . - . ID=gene-VA249_RS22385;Name=VA249_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22385;old_locus_tag=VYA_42700 NZ_AP024167.1 Protein Homology CDS 177134 177703 . - 0 ID=cds-WP_176703703.1;Parent=gene-VA249_RS22385;Dbxref=Genbank:WP_176703703.1;Name=WP_176703703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017152.2;locus_tag=VA249_RS22385;product=hypothetical protein;protein_id=WP_176703703.1;transl_table=11 NZ_AP024167.1 RefSeq gene 177777 181163 . - . ID=gene-VA249_RS22390;Name=VA249_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22390;old_locus_tag=VYA_42710 NZ_AP024167.1 Protein Homology CDS 177777 181163 . - 0 ID=cds-WP_221072301.1;Parent=gene-VA249_RS22390;Dbxref=Genbank:WP_221072301.1;Name=WP_221072301.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=VA249_RS22390;product=ATP-binding protein;protein_id=WP_221072301.1;transl_table=11 NZ_AP024167.1 RefSeq gene 181623 182162 . - . ID=gene-VA249_RS22395;Name=VA249_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22395;old_locus_tag=VYA_42720 NZ_AP024167.1 GeneMarkS-2+ CDS 181623 182162 . - 0 ID=cds-WP_176703701.1;Parent=gene-VA249_RS22395;Dbxref=Genbank:WP_176703701.1;Name=WP_176703701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22395;product=hypothetical protein;protein_id=WP_176703701.1;transl_table=11 NZ_AP024167.1 RefSeq gene 182205 182393 . - . ID=gene-VA249_RS22400;Name=VA249_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22400;old_locus_tag=VYA_42730 NZ_AP024167.1 GeneMarkS-2+ CDS 182205 182393 . - 0 ID=cds-WP_176703700.1;Parent=gene-VA249_RS22400;Dbxref=Genbank:WP_176703700.1;Name=WP_176703700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22400;product=hypothetical protein;protein_id=WP_176703700.1;transl_table=11 NZ_AP024167.1 RefSeq gene 182515 183642 . - . ID=gene-VA249_RS22405;Name=VA249_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22405;old_locus_tag=VYA_42740 NZ_AP024167.1 Protein Homology CDS 182515 183642 . - 0 ID=cds-WP_176703699.1;Parent=gene-VA249_RS22405;Dbxref=Genbank:WP_176703699.1;Name=WP_176703699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014786.2;locus_tag=VA249_RS22405;product=hypothetical protein;protein_id=WP_176703699.1;transl_table=11 NZ_AP024167.1 RefSeq gene 183646 184293 . - . ID=gene-VA249_RS22410;Name=VA249_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22410;old_locus_tag=VYA_42750 NZ_AP024167.1 GeneMarkS-2+ CDS 183646 184293 . - 0 ID=cds-WP_176703698.1;Parent=gene-VA249_RS22410;Dbxref=Genbank:WP_176703698.1;Name=WP_176703698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22410;product=hypothetical protein;protein_id=WP_176703698.1;transl_table=11 NZ_AP024167.1 RefSeq gene 184286 184657 . - . ID=gene-VA249_RS22415;Name=VA249_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22415;old_locus_tag=VYA_42760 NZ_AP024167.1 GeneMarkS-2+ CDS 184286 184657 . - 0 ID=cds-WP_176703697.1;Parent=gene-VA249_RS22415;Dbxref=Genbank:WP_176703697.1;Name=WP_176703697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22415;product=hypothetical protein;protein_id=WP_176703697.1;transl_table=11 NZ_AP024167.1 RefSeq gene 184764 186986 . + . ID=gene-VA249_RS22420;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=VA249_RS22420;old_locus_tag=VYA_42770 NZ_AP024167.1 Protein Homology CDS 184764 186986 . + 0 ID=cds-WP_176703696.1;Parent=gene-VA249_RS22420;Dbxref=Genbank:WP_176703696.1;Name=WP_176703696.1;Ontology_term=GO:0006260,GO:0003678,GO:0003688,GO:0016818,GO:0005658;gbkey=CDS;gene=priA;go_component=alpha DNA polymerase:primase complex|0005658||IEA;go_function=DNA helicase activity|0003678||IEA,DNA replication origin binding|0003688||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR00595.1;locus_tag=VA249_RS22420;product=primosomal protein N';protein_id=WP_176703696.1;transl_table=11 NZ_AP024167.1 RefSeq gene 187105 187644 . + . ID=gene-VA249_RS22425;Name=VA249_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22425;old_locus_tag=VYA_42780 NZ_AP024167.1 GeneMarkS-2+ CDS 187105 187644 . + 0 ID=cds-WP_176703695.1;Parent=gene-VA249_RS22425;Dbxref=Genbank:WP_176703695.1;Name=WP_176703695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22425;product=hypothetical protein;protein_id=WP_176703695.1;transl_table=11 NZ_AP024167.1 RefSeq gene 187646 188407 . + . ID=gene-VA249_RS22430;Name=VA249_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22430;old_locus_tag=VYA_42790 NZ_AP024167.1 GeneMarkS-2+ CDS 187646 188407 . + 0 ID=cds-WP_176703694.1;Parent=gene-VA249_RS22430;Dbxref=Genbank:WP_176703694.1;Name=WP_176703694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22430;product=hypothetical protein;protein_id=WP_176703694.1;transl_table=11 NZ_AP024167.1 RefSeq gene 188404 189219 . + . ID=gene-VA249_RS22435;Name=VA249_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22435;old_locus_tag=VYA_42800 NZ_AP024167.1 GeneMarkS-2+ CDS 188404 189219 . + 0 ID=cds-WP_176703693.1;Parent=gene-VA249_RS22435;Dbxref=Genbank:WP_176703693.1;Name=WP_176703693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22435;product=hypothetical protein;protein_id=WP_176703693.1;transl_table=11 NZ_AP024167.1 RefSeq gene 189262 189786 . + . ID=gene-VA249_RS22440;Name=VA249_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22440;old_locus_tag=VYA_42810 NZ_AP024167.1 Protein Homology CDS 189262 189786 . + 0 ID=cds-WP_176703692.1;Parent=gene-VA249_RS22440;Dbxref=Genbank:WP_176703692.1;Name=WP_176703692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024895.2;locus_tag=VA249_RS22440;product=outer membrane beta-barrel protein;protein_id=WP_176703692.1;transl_table=11 NZ_AP024167.1 RefSeq gene 189844 190359 . + . ID=gene-VA249_RS22445;Name=VA249_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22445;old_locus_tag=VYA_42820 NZ_AP024167.1 GeneMarkS-2+ CDS 189844 190359 . + 0 ID=cds-WP_221072302.1;Parent=gene-VA249_RS22445;Dbxref=Genbank:WP_221072302.1;Name=WP_221072302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22445;product=hypothetical protein;protein_id=WP_221072302.1;transl_table=11 NZ_AP024167.1 RefSeq gene 191893 192738 . - . ID=gene-VA249_RS22450;Name=VA249_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22450;old_locus_tag=VYA_42840 NZ_AP024167.1 Protein Homology CDS 191893 192738 . - 0 ID=cds-WP_176703690.1;Parent=gene-VA249_RS22450;Dbxref=Genbank:WP_176703690.1;Name=WP_176703690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=VA249_RS22450;product=CPBP family intramembrane metalloprotease;protein_id=WP_176703690.1;transl_table=11 NZ_AP024167.1 RefSeq gene 192768 192953 . - . ID=gene-VA249_RS22455;Name=VA249_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22455;old_locus_tag=VYA_42850 NZ_AP024167.1 GeneMarkS-2+ CDS 192768 192953 . - 0 ID=cds-WP_176703689.1;Parent=gene-VA249_RS22455;Dbxref=Genbank:WP_176703689.1;Name=WP_176703689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22455;product=hypothetical protein;protein_id=WP_176703689.1;transl_table=11 NZ_AP024167.1 RefSeq gene 193055 193543 . - . ID=gene-VA249_RS22460;Name=VA249_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22460;old_locus_tag=VYA_42860 NZ_AP024167.1 GeneMarkS-2+ CDS 193055 193543 . - 0 ID=cds-WP_176703688.1;Parent=gene-VA249_RS22460;Dbxref=Genbank:WP_176703688.1;Name=WP_176703688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22460;product=hypothetical protein;protein_id=WP_176703688.1;transl_table=11 NZ_AP024167.1 RefSeq gene 193797 194393 . - . ID=gene-VA249_RS22465;Name=VA249_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22465;old_locus_tag=VYA_42870 NZ_AP024167.1 GeneMarkS-2+ CDS 193797 194393 . - 0 ID=cds-WP_176703687.1;Parent=gene-VA249_RS22465;Dbxref=Genbank:WP_176703687.1;Name=WP_176703687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22465;product=hypothetical protein;protein_id=WP_176703687.1;transl_table=11 NZ_AP024167.1 RefSeq gene 194387 194611 . - . ID=gene-VA249_RS22470;Name=VA249_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22470;old_locus_tag=VYA_42880 NZ_AP024167.1 GeneMarkS-2+ CDS 194387 194611 . - 0 ID=cds-WP_221072304.1;Parent=gene-VA249_RS22470;Dbxref=Genbank:WP_221072304.1;Name=WP_221072304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22470;product=hypothetical protein;protein_id=WP_221072304.1;transl_table=11 NZ_AP024167.1 RefSeq gene 194658 195155 . - . ID=gene-VA249_RS22475;Name=VA249_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22475;old_locus_tag=VYA_42890 NZ_AP024167.1 GeneMarkS-2+ CDS 194658 195155 . - 0 ID=cds-WP_176703685.1;Parent=gene-VA249_RS22475;Dbxref=Genbank:WP_176703685.1;Name=WP_176703685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22475;product=hypothetical protein;protein_id=WP_176703685.1;transl_table=11 NZ_AP024167.1 RefSeq gene 195397 195795 . - . ID=gene-VA249_RS22485;Name=VA249_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22485;old_locus_tag=VYA_42910 NZ_AP024167.1 GeneMarkS-2+ CDS 195397 195795 . - 0 ID=cds-WP_176703683.1;Parent=gene-VA249_RS22485;Dbxref=Genbank:WP_176703683.1;Name=WP_176703683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22485;product=hypothetical protein;protein_id=WP_176703683.1;transl_table=11 NZ_AP024167.1 RefSeq gene 195804 195983 . - . ID=gene-VA249_RS22490;Name=VA249_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22490;old_locus_tag=VYA_42920 NZ_AP024167.1 GeneMarkS-2+ CDS 195804 195983 . - 0 ID=cds-WP_176703681.1;Parent=gene-VA249_RS22490;Dbxref=Genbank:WP_176703681.1;Name=WP_176703681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22490;product=hypothetical protein;protein_id=WP_176703681.1;transl_table=11 NZ_AP024167.1 RefSeq gene 195973 196317 . - . ID=gene-VA249_RS22495;Name=VA249_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22495;old_locus_tag=VYA_42930 NZ_AP024167.1 GeneMarkS-2+ CDS 195973 196317 . - 0 ID=cds-WP_221072307.1;Parent=gene-VA249_RS22495;Dbxref=Genbank:WP_221072307.1;Name=WP_221072307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22495;product=hypothetical protein;protein_id=WP_221072307.1;transl_table=11 NZ_AP024167.1 RefSeq gene 196524 197369 . - . ID=gene-VA249_RS22500;Name=VA249_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22500;old_locus_tag=VYA_42940 NZ_AP024167.1 Protein Homology CDS 196524 197369 . - 0 ID=cds-WP_176703677.1;Parent=gene-VA249_RS22500;Dbxref=Genbank:WP_176703677.1;Name=WP_176703677.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=VA249_RS22500;product=thioredoxin fold domain-containing protein;protein_id=WP_176703677.1;transl_table=11 NZ_AP024167.1 RefSeq gene 197435 197827 . - . ID=gene-VA249_RS22505;Name=VA249_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22505;old_locus_tag=VYA_42950 NZ_AP024167.1 GeneMarkS-2+ CDS 197435 197827 . - 0 ID=cds-WP_176703675.1;Parent=gene-VA249_RS22505;Dbxref=Genbank:WP_176703675.1;Name=WP_176703675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22505;product=hypothetical protein;protein_id=WP_176703675.1;transl_table=11 NZ_AP024167.1 RefSeq gene 197842 198552 . - . ID=gene-VA249_RS22510;Name=VA249_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22510;old_locus_tag=VYA_42960 NZ_AP024167.1 Protein Homology CDS 197842 198552 . - 0 ID=cds-WP_176703673.1;Parent=gene-VA249_RS22510;Dbxref=Genbank:WP_176703673.1;Name=WP_176703673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024853.2;locus_tag=VA249_RS22510;product=thioredoxin domain-containing protein;protein_id=WP_176703673.1;transl_table=11 NZ_AP024167.1 RefSeq gene 198563 199201 . - . ID=gene-VA249_RS22515;Name=VA249_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22515;old_locus_tag=VYA_42970 NZ_AP024167.1 Protein Homology CDS 198563 199201 . - 0 ID=cds-WP_176703671.1;Parent=gene-VA249_RS22515;Dbxref=Genbank:WP_176703671.1;Name=WP_176703671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025706.2;locus_tag=VA249_RS22515;product=DUF4400 domain-containing protein;protein_id=WP_176703671.1;transl_table=11 NZ_AP024167.1 RefSeq gene 199377 200465 . - . ID=gene-VA249_RS22520;Name=VA249_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22520;old_locus_tag=VYA_42980 NZ_AP024167.1 GeneMarkS-2+ CDS 199377 200465 . - 0 ID=cds-WP_176703670.1;Parent=gene-VA249_RS22520;Dbxref=Genbank:WP_176703670.1;Name=WP_176703670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22520;product=hypothetical protein;protein_id=WP_176703670.1;transl_table=11 NZ_AP024167.1 RefSeq gene 200521 202239 . - . ID=gene-VA249_RS22525;Name=VA249_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22525;old_locus_tag=VYA_42990 NZ_AP024167.1 Protein Homology CDS 200521 202239 . - 0 ID=cds-WP_176703668.1;Parent=gene-VA249_RS22525;Dbxref=Genbank:WP_176703668.1;Name=WP_176703668.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024642.2;locus_tag=VA249_RS22525;product=UvrD-helicase domain-containing protein;protein_id=WP_176703668.1;transl_table=11 NZ_AP024167.1 RefSeq gene 202360 202770 . + . ID=gene-VA249_RS22530;Name=VA249_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22530 NZ_AP024167.1 GeneMarkS-2+ CDS 202360 202770 . + 0 ID=cds-WP_221072309.1;Parent=gene-VA249_RS22530;Dbxref=Genbank:WP_221072309.1;Name=WP_221072309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22530;product=hypothetical protein;protein_id=WP_221072309.1;transl_table=11 NZ_AP024167.1 RefSeq gene 202763 203566 . + . ID=gene-VA249_RS22535;Name=VA249_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22535;old_locus_tag=VYA_43000 NZ_AP024167.1 Protein Homology CDS 202763 203566 . + 0 ID=cds-WP_176703664.1;Parent=gene-VA249_RS22535;Dbxref=Genbank:WP_176703664.1;Name=WP_176703664.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.2;locus_tag=VA249_RS22535;product=transglycosylase SLT domain-containing protein;protein_id=WP_176703664.1;transl_table=11 NZ_AP024167.1 RefSeq gene 203577 204206 . + . ID=gene-VA249_RS22540;Name=VA249_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22540;old_locus_tag=VYA_43010 NZ_AP024167.1 GeneMarkS-2+ CDS 203577 204206 . + 0 ID=cds-WP_221072311.1;Parent=gene-VA249_RS22540;Dbxref=Genbank:WP_221072311.1;Name=WP_221072311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22540;product=hypothetical protein;protein_id=WP_221072311.1;transl_table=11 NZ_AP024167.1 RefSeq gene 204216 204497 . + . ID=gene-VA249_RS22545;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=VA249_RS22545;old_locus_tag=VYA_43020 NZ_AP024167.1 Protein Homology CDS 204216 204497 . + 0 ID=cds-WP_176703660.1;Parent=gene-VA249_RS22545;Dbxref=Genbank:WP_176703660.1;Name=WP_176703660.1;gbkey=CDS;gene=traL;inference=COORDINATES: protein motif:HMM:TIGR02762.1;locus_tag=VA249_RS22545;product=type IV conjugative transfer system protein TraL;protein_id=WP_176703660.1;transl_table=11 NZ_AP024167.1 RefSeq gene 204785 205399 . + . ID=gene-VA249_RS22550;Name=VA249_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22550;old_locus_tag=VYA_43030 NZ_AP024167.1 GeneMarkS-2+ CDS 204785 205399 . + 0 ID=cds-WP_176703658.1;Parent=gene-VA249_RS22550;Dbxref=Genbank:WP_176703658.1;Name=WP_176703658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22550;product=hypothetical protein;protein_id=WP_176703658.1;transl_table=11 NZ_AP024167.1 RefSeq gene 205396 205794 . - . ID=gene-VA249_RS22555;Name=VA249_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22555;old_locus_tag=VYA_43040 NZ_AP024167.1 GeneMarkS-2+ CDS 205396 205794 . - 0 ID=cds-WP_221072313.1;Parent=gene-VA249_RS22555;Dbxref=Genbank:WP_221072313.1;Name=WP_221072313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22555;product=hypothetical protein;protein_id=WP_221072313.1;transl_table=11 NZ_AP024167.1 RefSeq gene 205787 206830 . - . ID=gene-VA249_RS22560;Name=VA249_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22560;old_locus_tag=VYA_43050 NZ_AP024167.1 Protein Homology CDS 205787 206830 . - 0 ID=cds-WP_176703655.1;Parent=gene-VA249_RS22560;Dbxref=Genbank:WP_176703655.1;Name=WP_176703655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018148.2;locus_tag=VA249_RS22560;product=ParM/StbA family protein;protein_id=WP_176703655.1;transl_table=11 NZ_AP024167.1 RefSeq gene 206897 208483 . - . ID=gene-VA249_RS22565;Name=VA249_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22565;old_locus_tag=VYA_43060 NZ_AP024167.1 GeneMarkS-2+ CDS 206897 208483 . - 0 ID=cds-WP_176703654.1;Parent=gene-VA249_RS22565;Dbxref=Genbank:WP_176703654.1;Name=WP_176703654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22565;product=hypothetical protein;protein_id=WP_176703654.1;transl_table=11 NZ_AP024167.1 RefSeq gene 208618 209652 . + . ID=gene-VA249_RS22570;Name=VA249_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22570;old_locus_tag=VYA_43070 NZ_AP024167.1 Protein Homology CDS 208618 209652 . + 0 ID=cds-WP_176703652.1;Parent=gene-VA249_RS22570;Dbxref=Genbank:WP_176703652.1;Name=WP_176703652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025105.2;locus_tag=VA249_RS22570;product=conjugal transfer protein TraF;protein_id=WP_176703652.1;transl_table=11 NZ_AP024167.1 RefSeq gene 209642 211111 . + . ID=gene-VA249_RS22575;Name=VA249_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22575;old_locus_tag=VYA_43080 NZ_AP024167.1 Protein Homology CDS 209642 211111 . + 0 ID=cds-WP_176703651.1;Parent=gene-VA249_RS22575;Dbxref=Genbank:WP_176703651.1;Name=WP_176703651.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017892.2;locus_tag=VA249_RS22575;product=conjugal transfer protein TraH;protein_id=WP_176703651.1;transl_table=11 NZ_AP024167.1 RefSeq gene 211123 215037 . + . ID=gene-VA249_RS22580;Name=VA249_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22580;old_locus_tag=VYA_43090 NZ_AP024167.1 Protein Homology CDS 211123 215037 . + 0 ID=cds-WP_176703650.1;Parent=gene-VA249_RS22580;Dbxref=Genbank:WP_176703650.1;Name=WP_176703650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019530.2;locus_tag=VA249_RS22580;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_176703650.1;transl_table=11 NZ_AP024167.1 RefSeq gene 215191 215820 . + . ID=gene-VA249_RS22585;Name=VA249_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22585;old_locus_tag=VYA_43100 NZ_AP024167.1 GeneMarkS-2+ CDS 215191 215820 . + 0 ID=cds-WP_176703649.1;Parent=gene-VA249_RS22585;Dbxref=Genbank:WP_176703649.1;Name=WP_176703649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22585;product=hypothetical protein;protein_id=WP_176703649.1;transl_table=11 NZ_AP024167.1 RefSeq gene 215817 216302 . + . ID=gene-VA249_RS22590;Name=VA249_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22590;old_locus_tag=VYA_43110 NZ_AP024167.1 GeneMarkS-2+ CDS 215817 216302 . + 0 ID=cds-WP_221072315.1;Parent=gene-VA249_RS22590;Dbxref=Genbank:WP_221072315.1;Name=WP_221072315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22590;product=hypothetical protein;protein_id=WP_221072315.1;transl_table=11 NZ_AP024167.1 RefSeq gene 216347 216835 . + . ID=gene-VA249_RS22595;Name=VA249_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22595;old_locus_tag=VYA_43120 NZ_AP024167.1 GeneMarkS-2+ CDS 216347 216835 . + 0 ID=cds-WP_221072317.1;Parent=gene-VA249_RS22595;Dbxref=Genbank:WP_221072317.1;Name=WP_221072317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22595;product=hypothetical protein;protein_id=WP_221072317.1;transl_table=11 NZ_AP024167.1 RefSeq gene 216897 218129 . + . ID=gene-VA249_RS22600;Name=VA249_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22600;old_locus_tag=VYA_43130 NZ_AP024167.1 GeneMarkS-2+ CDS 216897 218129 . + 0 ID=cds-WP_176703646.1;Parent=gene-VA249_RS22600;Dbxref=Genbank:WP_176703646.1;Name=WP_176703646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22600;product=hypothetical protein;protein_id=WP_176703646.1;transl_table=11 NZ_AP024167.1 RefSeq gene 218116 219114 . + . ID=gene-VA249_RS22605;Name=VA249_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22605;old_locus_tag=VYA_43140 NZ_AP024167.1 GeneMarkS-2+ CDS 218116 219114 . + 0 ID=cds-WP_176703644.1;Parent=gene-VA249_RS22605;Dbxref=Genbank:WP_176703644.1;Name=WP_176703644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22605;product=hypothetical protein;protein_id=WP_176703644.1;transl_table=11 NZ_AP024167.1 RefSeq gene 219107 220393 . + . ID=gene-VA249_RS22610;Name=VA249_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22610;old_locus_tag=VYA_43150 NZ_AP024167.1 GeneMarkS-2+ CDS 219107 220393 . + 0 ID=cds-WP_176703642.1;Parent=gene-VA249_RS22610;Dbxref=Genbank:WP_176703642.1;Name=WP_176703642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22610;product=hypothetical protein;protein_id=WP_176703642.1;transl_table=11 NZ_AP024167.1 RefSeq gene 220532 220726 . - . ID=gene-VA249_RS22615;Name=VA249_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22615;old_locus_tag=VYA_43160 NZ_AP024167.1 GeneMarkS-2+ CDS 220532 220726 . - 0 ID=cds-WP_221072319.1;Parent=gene-VA249_RS22615;Dbxref=Genbank:WP_221072319.1;Name=WP_221072319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22615;product=hypothetical protein;protein_id=WP_221072319.1;transl_table=11 NZ_AP024167.1 RefSeq gene 220834 221037 . - . ID=gene-VA249_RS22620;Name=VA249_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22620;old_locus_tag=VYA_43170 NZ_AP024167.1 GeneMarkS-2+ CDS 220834 221037 . - 0 ID=cds-WP_176703639.1;Parent=gene-VA249_RS22620;Dbxref=Genbank:WP_176703639.1;Name=WP_176703639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22620;product=hypothetical protein;protein_id=WP_176703639.1;transl_table=11 NZ_AP024167.1 RefSeq gene 221050 221712 . - . ID=gene-VA249_RS22625;Name=VA249_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22625;old_locus_tag=VYA_43180 NZ_AP024167.1 GeneMarkS-2+ CDS 221050 221712 . - 0 ID=cds-WP_176703637.1;Parent=gene-VA249_RS22625;Dbxref=Genbank:WP_176703637.1;Name=WP_176703637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22625;product=hypothetical protein;protein_id=WP_176703637.1;transl_table=11 NZ_AP024167.1 RefSeq gene 221715 222656 . - . ID=gene-VA249_RS22630;Name=VA249_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22630;old_locus_tag=VYA_43190 NZ_AP024167.1 Protein Homology CDS 221715 222656 . - 0 ID=cds-WP_176703635.1;Parent=gene-VA249_RS22630;Dbxref=Genbank:WP_176703635.1;Name=WP_176703635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013324.2;locus_tag=VA249_RS22630;product=SPFH/Band 7/PHB domain protein;protein_id=WP_176703635.1;transl_table=11 NZ_AP024167.1 RefSeq gene 222808 223638 . + . ID=gene-VA249_RS22635;Name=VA249_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22635;old_locus_tag=VYA_43200 NZ_AP024167.1 GeneMarkS-2+ CDS 222808 223638 . + 0 ID=cds-WP_176703633.1;Parent=gene-VA249_RS22635;Dbxref=Genbank:WP_176703633.1;Name=WP_176703633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22635;product=hypothetical protein;protein_id=WP_176703633.1;transl_table=11 NZ_AP024167.1 RefSeq gene 223866 224567 . + . ID=gene-VA249_RS22640;Name=VA249_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22640;old_locus_tag=VYA_43210 NZ_AP024167.1 GeneMarkS-2+ CDS 223866 224567 . + 0 ID=cds-WP_176703631.1;Parent=gene-VA249_RS22640;Dbxref=Genbank:WP_176703631.1;Name=WP_176703631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22640;product=hypothetical protein;protein_id=WP_176703631.1;transl_table=11 NZ_AP024167.1 RefSeq gene 224868 225143 . + . ID=gene-VA249_RS22645;Name=VA249_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22645;old_locus_tag=VYA_43220 NZ_AP024167.1 GeneMarkS-2+ CDS 224868 225143 . + 0 ID=cds-WP_176703630.1;Parent=gene-VA249_RS22645;Dbxref=Genbank:WP_176703630.1;Name=WP_176703630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22645;product=hypothetical protein;protein_id=WP_176703630.1;transl_table=11 NZ_AP024167.1 RefSeq gene 225204 225842 . - . ID=gene-VA249_RS22650;Name=VA249_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22650;old_locus_tag=VYA_43230 NZ_AP024167.1 GeneMarkS-2+ CDS 225204 225842 . - 0 ID=cds-WP_176703628.1;Parent=gene-VA249_RS22650;Dbxref=Genbank:WP_176703628.1;Name=WP_176703628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22650;product=hypothetical protein;protein_id=WP_176703628.1;transl_table=11 NZ_AP024167.1 RefSeq gene 225953 227005 . + . ID=gene-VA249_RS22655;Name=VA249_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22655;old_locus_tag=VYA_43240 NZ_AP024167.1 GeneMarkS-2+ CDS 225953 227005 . + 0 ID=cds-WP_176703626.1;Parent=gene-VA249_RS22655;Dbxref=Genbank:WP_176703626.1;Name=WP_176703626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22655;product=hypothetical protein;protein_id=WP_176703626.1;transl_table=11 NZ_AP024167.1 RefSeq gene 227058 227783 . - . ID=gene-VA249_RS22660;Name=VA249_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22660;old_locus_tag=VYA_43250 NZ_AP024167.1 Protein Homology CDS 227058 227783 . - 0 ID=cds-WP_176703625.1;Parent=gene-VA249_RS22660;Dbxref=Genbank:WP_176703625.1;Name=WP_176703625.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: protein motif:HMM:NF013122.2;locus_tag=VA249_RS22660;product=exonuclease domain-containing protein;protein_id=WP_176703625.1;transl_table=11 NZ_AP024167.1 RefSeq gene 227877 228104 . - . ID=gene-VA249_RS22665;Name=VA249_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22665;old_locus_tag=VYA_43260 NZ_AP024167.1 GeneMarkS-2+ CDS 227877 228104 . - 0 ID=cds-WP_221072321.1;Parent=gene-VA249_RS22665;Dbxref=Genbank:WP_221072321.1;Name=WP_221072321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22665;product=hypothetical protein;protein_id=WP_221072321.1;transl_table=11 NZ_AP024167.1 RefSeq gene 228104 228376 . - . ID=gene-VA249_RS22670;Name=VA249_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22670;old_locus_tag=VYA_43270 NZ_AP024167.1 GeneMarkS-2+ CDS 228104 228376 . - 0 ID=cds-WP_176703622.1;Parent=gene-VA249_RS22670;Dbxref=Genbank:WP_176703622.1;Name=WP_176703622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22670;product=hypothetical protein;protein_id=WP_176703622.1;transl_table=11 NZ_AP024167.1 RefSeq gene 228603 230324 . - . ID=gene-VA249_RS22675;Name=VA249_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22675;old_locus_tag=VYA_43280 NZ_AP024167.1 GeneMarkS-2+ CDS 228603 230324 . - 0 ID=cds-WP_176703621.1;Parent=gene-VA249_RS22675;Dbxref=Genbank:WP_176703621.1;Name=WP_176703621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22675;product=hypothetical protein;protein_id=WP_176703621.1;transl_table=11 NZ_AP024167.1 RefSeq gene 230601 232100 . - . ID=gene-VA249_RS22680;Name=VA249_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22680;old_locus_tag=VYA_43290 NZ_AP024167.1 GeneMarkS-2+ CDS 230601 232100 . - 0 ID=cds-WP_221072323.1;Parent=gene-VA249_RS22680;Dbxref=Genbank:WP_221072323.1;Name=WP_221072323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22680;product=hypothetical protein;protein_id=WP_221072323.1;transl_table=11 NZ_AP024167.1 RefSeq gene 232454 233269 . + . ID=gene-VA249_RS22685;Name=VA249_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22685;old_locus_tag=VYA_43300 NZ_AP024167.1 Protein Homology CDS 232454 233269 . + 0 ID=cds-WP_176703615.1;Parent=gene-VA249_RS22685;Dbxref=Genbank:WP_176703615.1;Name=WP_176703615.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013324.2;locus_tag=VA249_RS22685;product=SPFH domain-containing protein;protein_id=WP_176703615.1;transl_table=11 NZ_AP024167.1 RefSeq gene 233330 233560 . - . ID=gene-VA249_RS22690;Name=VA249_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22690;old_locus_tag=VYA_43310 NZ_AP024167.1 GeneMarkS-2+ CDS 233330 233560 . - 0 ID=cds-WP_176703613.1;Parent=gene-VA249_RS22690;Dbxref=Genbank:WP_176703613.1;Name=WP_176703613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22690;product=hypothetical protein;protein_id=WP_176703613.1;transl_table=11 NZ_AP024167.1 RefSeq gene 233716 234180 . - . ID=gene-VA249_RS22695;Name=VA249_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22695;old_locus_tag=VYA_43320 NZ_AP024167.1 Protein Homology CDS 233716 234180 . - 0 ID=cds-WP_176703611.1;Parent=gene-VA249_RS22695;Dbxref=Genbank:WP_176703611.1;Name=WP_176703611.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: protein motif:HMM:NF024996.2;locus_tag=VA249_RS22695;product=porin;protein_id=WP_176703611.1;transl_table=11 NZ_AP024167.1 RefSeq gene 234769 235395 . - . ID=gene-VA249_RS22700;Name=VA249_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22700;old_locus_tag=VYA_43340 NZ_AP024167.1 GeneMarkS-2+ CDS 234769 235395 . - 0 ID=cds-WP_176703610.1-2;Parent=gene-VA249_RS22700;Dbxref=Genbank:WP_176703610.1;Name=WP_176703610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22700;product=hypothetical protein;protein_id=WP_176703610.1;transl_table=11 NZ_AP024167.1 RefSeq gene 235588 237060 . - . ID=gene-VA249_RS22705;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=VA249_RS22705;old_locus_tag=VYA_43350 NZ_AP024167.1 Protein Homology CDS 235588 237060 . - 0 ID=cds-WP_176703910.1-2;Parent=gene-VA249_RS22705;Dbxref=Genbank:WP_176703910.1;Name=WP_176703910.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019282658.1;locus_tag=VA249_RS22705;product=group II intron reverse transcriptase/maturase;protein_id=WP_176703910.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 237654 237869 . - . ID=gene-VA249_RS22710;Name=VA249_RS22710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS22710;old_locus_tag=VYA_43360;partial=true;pseudo=true;start_range=.,237654 NZ_AP024167.1 Protein Homology CDS 237654 237869 . - 0 ID=cds-VA249_RS22710;Parent=gene-VA249_RS22710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612302.1;locus_tag=VA249_RS22710;partial=true;product=transposase;pseudo=true;start_range=.,237654;transl_table=11 NZ_AP024167.1 RefSeq gene 238105 238341 . + . ID=gene-VA249_RS22715;Name=VA249_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22715;old_locus_tag=VYA_43370 NZ_AP024167.1 GeneMarkS-2+ CDS 238105 238341 . + 0 ID=cds-WP_176703608.1-2;Parent=gene-VA249_RS22715;Dbxref=Genbank:WP_176703608.1;Name=WP_176703608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22715;product=hypothetical protein;protein_id=WP_176703608.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 238366 238548 . + . ID=gene-VA249_RS24180;Name=VA249_RS24180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24180;old_locus_tag=VYA_43380;partial=true;pseudo=true;start_range=.,238366 NZ_AP024167.1 Protein Homology CDS 238366 238548 . + 0 ID=cds-VA249_RS24180;Parent=gene-VA249_RS24180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011494503.1;locus_tag=VA249_RS24180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,238366;transl_table=11 NZ_AP024167.1 RefSeq gene 238674 239045 . + . ID=gene-VA249_RS22720;Name=VA249_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22720;old_locus_tag=VYA_43390 NZ_AP024167.1 GeneMarkS-2+ CDS 238674 239045 . + 0 ID=cds-WP_176703606.1-2;Parent=gene-VA249_RS22720;Dbxref=Genbank:WP_176703606.1;Name=WP_176703606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22720;product=hypothetical protein;protein_id=WP_176703606.1;transl_table=11 NZ_AP024167.1 RefSeq gene 239422 239817 . + . ID=gene-VA249_RS22725;Name=VA249_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22725;old_locus_tag=VYA_43400 NZ_AP024167.1 GeneMarkS-2+ CDS 239422 239817 . + 0 ID=cds-WP_176703605.1-2;Parent=gene-VA249_RS22725;Dbxref=Genbank:WP_176703605.1;Name=WP_176703605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22725;product=hypothetical protein;protein_id=WP_176703605.1;transl_table=11 NZ_AP024167.1 RefSeq gene 240037 240267 . - . ID=gene-VA249_RS22730;Name=VA249_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22730;old_locus_tag=VYA_43410 NZ_AP024167.1 Protein Homology CDS 240037 240267 . - 0 ID=cds-WP_176703603.1-2;Parent=gene-VA249_RS22730;Dbxref=Genbank:WP_176703603.1;Name=WP_176703603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005463131.1;locus_tag=VA249_RS22730;product=helix-turn-helix domain-containing protein;protein_id=WP_176703603.1;transl_table=11 NZ_AP024167.1 RefSeq gene 240351 240911 . + . ID=gene-VA249_RS22735;Name=VA249_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22735;old_locus_tag=VYA_43420 NZ_AP024167.1 GeneMarkS-2+ CDS 240351 240911 . + 0 ID=cds-WP_176703601.1-2;Parent=gene-VA249_RS22735;Dbxref=Genbank:WP_176703601.1;Name=WP_176703601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22735;product=hypothetical protein;protein_id=WP_176703601.1;transl_table=11 NZ_AP024167.1 RefSeq gene 240955 241428 . - . ID=gene-VA249_RS22740;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=VA249_RS22740;old_locus_tag=VYA_43430 NZ_AP024167.1 Protein Homology CDS 240955 241428 . - 0 ID=cds-WP_176703599.1-2;Parent=gene-VA249_RS22740;Dbxref=Genbank:WP_176703599.1;Name=WP_176703599.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017189290.1;locus_tag=VA249_RS22740;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_176703599.1;transl_table=11 NZ_AP024167.1 RefSeq gene 241543 242040 . - . ID=gene-VA249_RS22745;Name=VA249_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22745;old_locus_tag=VYA_43440 NZ_AP024167.1 Protein Homology CDS 241543 242040 . - 0 ID=cds-WP_176703597.1-2;Parent=gene-VA249_RS22745;Dbxref=Genbank:WP_176703597.1;Name=WP_176703597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005484390.1;locus_tag=VA249_RS22745;product=bacterioferritin comigratory protein;protein_id=WP_176703597.1;transl_table=11 NZ_AP024167.1 RefSeq gene 242040 244235 . - . ID=gene-VA249_RS22750;Name=VA249_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22750;old_locus_tag=VYA_43450 NZ_AP024167.1 Protein Homology CDS 242040 244235 . - 0 ID=cds-WP_176703596.1-2;Parent=gene-VA249_RS22750;Dbxref=Genbank:WP_176703596.1;Name=WP_176703596.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817790.1;locus_tag=VA249_RS22750;product=tyrosine-type recombinase/integrase;protein_id=WP_176703596.1;transl_table=11 NZ_AP024167.1 RefSeq gene 244250 246571 . - . ID=gene-VA249_RS22755;Name=VA249_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22755;old_locus_tag=VYA_43460 NZ_AP024167.1 Protein Homology CDS 244250 246571 . - 0 ID=cds-WP_176703595.1-2;Parent=gene-VA249_RS22755;Dbxref=Genbank:WP_176703595.1;Name=WP_176703595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005484637.1;locus_tag=VA249_RS22755;product=hypothetical protein;protein_id=WP_176703595.1;transl_table=11 NZ_AP024167.1 RefSeq gene 246571 247974 . - . ID=gene-VA249_RS22760;Name=VA249_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22760;old_locus_tag=VYA_43470 NZ_AP024167.1 Protein Homology CDS 246571 247974 . - 0 ID=cds-WP_176703594.1-2;Parent=gene-VA249_RS22760;Dbxref=Genbank:WP_176703594.1;Name=WP_176703594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017632496.1;locus_tag=VA249_RS22760;product=site-specific integrase;protein_id=WP_176703594.1;transl_table=11 NZ_AP024167.1 RefSeq gene 248045 248515 . - . ID=gene-VA249_RS22765;Name=VA249_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22765;old_locus_tag=VYA_43480 NZ_AP024167.1 GeneMarkS-2+ CDS 248045 248515 . - 0 ID=cds-WP_176703909.1;Parent=gene-VA249_RS22765;Dbxref=Genbank:WP_176703909.1;Name=WP_176703909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22765;product=hypothetical protein;protein_id=WP_176703909.1;transl_table=11 NZ_AP024167.1 RefSeq gene 248643 249470 . - . ID=gene-VA249_RS22770;Name=VA249_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22770;old_locus_tag=VYA_43490 NZ_AP024167.1 Protein Homology CDS 248643 249470 . - 0 ID=cds-WP_176703908.1;Parent=gene-VA249_RS22770;Dbxref=Genbank:WP_176703908.1;Name=WP_176703908.1;Ontology_term=GO:0006282;gbkey=CDS;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: protein motif:HMM:NF014668.2;locus_tag=VA249_RS22770;product=RecX family transcriptional regulator;protein_id=WP_176703908.1;transl_table=11 NZ_AP024167.1 RefSeq gene 249781 250566 . + . ID=gene-VA249_RS22775;Name=VA249_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22775;old_locus_tag=VYA_43500 NZ_AP024167.1 Protein Homology CDS 249781 250566 . + 0 ID=cds-WP_176703907.1;Parent=gene-VA249_RS22775;Dbxref=Genbank:WP_176703907.1;Name=WP_176703907.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=VA249_RS22775;product=tyrosine-type recombinase/integrase;protein_id=WP_176703907.1;transl_table=11 NZ_AP024167.1 RefSeq gene 251022 251219 . + . ID=gene-VA249_RS22780;Name=VA249_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22780;old_locus_tag=VYA_43510 NZ_AP024167.1 GeneMarkS-2+ CDS 251022 251219 . + 0 ID=cds-WP_176703906.1;Parent=gene-VA249_RS22780;Dbxref=Genbank:WP_176703906.1;Name=WP_176703906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22780;product=hypothetical protein;protein_id=WP_176703906.1;transl_table=11 NZ_AP024167.1 RefSeq gene 251304 252299 . + . ID=gene-VA249_RS22785;Name=VA249_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22785;old_locus_tag=VYA_43520 NZ_AP024167.1 Protein Homology CDS 251304 252299 . + 0 ID=cds-WP_176703905.1;Parent=gene-VA249_RS22785;Dbxref=Genbank:WP_176703905.1;Name=WP_176703905.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017300.2;locus_tag=VA249_RS22785;product=hypothetical protein;protein_id=WP_176703905.1;transl_table=11 NZ_AP024167.1 RefSeq gene 252286 252738 . + . ID=gene-VA249_RS22790;Name=VA249_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22790;old_locus_tag=VYA_43530 NZ_AP024167.1 GeneMarkS-2+ CDS 252286 252738 . + 0 ID=cds-WP_221072326.1;Parent=gene-VA249_RS22790;Dbxref=Genbank:WP_221072326.1;Name=WP_221072326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22790;product=hypothetical protein;protein_id=WP_221072326.1;transl_table=11 NZ_AP024167.1 RefSeq gene 252979 254622 . + . ID=gene-VA249_RS22795;Name=VA249_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22795;old_locus_tag=VYA_43540 NZ_AP024167.1 Protein Homology CDS 252979 254622 . + 0 ID=cds-WP_221072328.1;Parent=gene-VA249_RS22795;Dbxref=Genbank:WP_221072328.1;Name=WP_221072328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=VA249_RS22795;product=ankyrin repeat domain-containing protein;protein_id=WP_221072328.1;transl_table=11 NZ_AP024167.1 RefSeq gene 255128 255433 . + . ID=gene-VA249_RS22800;Name=VA249_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22800;old_locus_tag=VYA_43550 NZ_AP024167.1 GeneMarkS-2+ CDS 255128 255433 . + 0 ID=cds-WP_176703902.1;Parent=gene-VA249_RS22800;Dbxref=Genbank:WP_176703902.1;Name=WP_176703902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22800;product=hypothetical protein;protein_id=WP_176703902.1;transl_table=11 NZ_AP024167.1 RefSeq gene 256191 256712 . - . ID=gene-VA249_RS22805;Name=VA249_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22805;old_locus_tag=VYA_43560 NZ_AP024167.1 GeneMarkS-2+ CDS 256191 256712 . - 0 ID=cds-WP_221072329.1;Parent=gene-VA249_RS22805;Dbxref=Genbank:WP_221072329.1;Name=WP_221072329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22805;product=hypothetical protein;protein_id=WP_221072329.1;transl_table=11 NZ_AP024167.1 RefSeq gene 256992 257696 . + . ID=gene-VA249_RS22810;Name=VA249_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22810;old_locus_tag=VYA_43570 NZ_AP024167.1 Protein Homology CDS 256992 257696 . + 0 ID=cds-WP_176703900.1;Parent=gene-VA249_RS22810;Dbxref=Genbank:WP_176703900.1;Name=WP_176703900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016790685.1;locus_tag=VA249_RS22810;product=S24 family peptidase;protein_id=WP_176703900.1;transl_table=11 NZ_AP024167.1 RefSeq gene 257690 258970 . + . ID=gene-VA249_RS22815;Name=VA249_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22815;old_locus_tag=VYA_43580 NZ_AP024167.1 Protein Homology CDS 257690 258970 . + 0 ID=cds-WP_176703899.1;Parent=gene-VA249_RS22815;Dbxref=Genbank:WP_176703899.1;Name=WP_176703899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016790684.1;locus_tag=VA249_RS22815;product=nucleotidyltransferase;protein_id=WP_176703899.1;transl_table=11 NZ_AP024167.1 RefSeq gene 258989 259426 . - . ID=gene-VA249_RS22820;Name=VA249_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22820;old_locus_tag=VYA_43590 NZ_AP024167.1 GeneMarkS-2+ CDS 258989 259426 . - 0 ID=cds-WP_221072330.1;Parent=gene-VA249_RS22820;Dbxref=Genbank:WP_221072330.1;Name=WP_221072330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22820;product=hypothetical protein;protein_id=WP_221072330.1;transl_table=11 NZ_AP024167.1 RefSeq gene 259528 260705 . + . ID=gene-VA249_RS22825;Name=VA249_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22825;old_locus_tag=VYA_43610 NZ_AP024167.1 Protein Homology CDS 259528 259795 . + 0 ID=cds-WP_176703897.1;Parent=gene-VA249_RS22825;Dbxref=Genbank:WP_176703897.1;Name=WP_176703897.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=VA249_RS22825;product=IS3 family transposase;protein_id=WP_176703897.1;transl_table=11 NZ_AP024167.1 Protein Homology CDS 259795 260705 . + 2 ID=cds-WP_176703897.1;Parent=gene-VA249_RS22825;Dbxref=Genbank:WP_176703897.1;Name=WP_176703897.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=VA249_RS22825;product=IS3 family transposase;protein_id=WP_176703897.1;transl_table=11 NZ_AP024167.1 RefSeq gene 260882 261421 . - . ID=gene-VA249_RS22830;Name=VA249_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22830;old_locus_tag=VYA_43620 NZ_AP024167.1 GeneMarkS-2+ CDS 260882 261421 . - 0 ID=cds-WP_176703896.1;Parent=gene-VA249_RS22830;Dbxref=Genbank:WP_176703896.1;Name=WP_176703896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22830;product=hypothetical protein;protein_id=WP_176703896.1;transl_table=11 NZ_AP024167.1 RefSeq gene 261563 262810 . - . ID=gene-VA249_RS22835;Name=VA249_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22835;old_locus_tag=VYA_43630 NZ_AP024167.1 Protein Homology CDS 261563 262810 . - 0 ID=cds-WP_176703895.1;Parent=gene-VA249_RS22835;Dbxref=Genbank:WP_176703895.1;Name=WP_176703895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074772.1;locus_tag=VA249_RS22835;product=GIY-YIG nuclease family protein;protein_id=WP_176703895.1;transl_table=11 NZ_AP024167.1 RefSeq gene 262815 264839 . - . ID=gene-VA249_RS22840;Name=VA249_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22840;old_locus_tag=VYA_43640 NZ_AP024167.1 Protein Homology CDS 262815 264839 . - 0 ID=cds-WP_176703894.1;Parent=gene-VA249_RS22840;Dbxref=Genbank:WP_176703894.1;Name=WP_176703894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006880978.1;locus_tag=VA249_RS22840;product=helicase-related protein;protein_id=WP_176703894.1;transl_table=11 NZ_AP024167.1 RefSeq gene 264868 267540 . - . ID=gene-VA249_RS22845;Name=VA249_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22845;old_locus_tag=VYA_43650 NZ_AP024167.1 Protein Homology CDS 264868 267540 . - 0 ID=cds-WP_176703893.1;Parent=gene-VA249_RS22845;Dbxref=Genbank:WP_176703893.1;Name=WP_176703893.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004735232.1;locus_tag=VA249_RS22845;product=N-6 DNA methylase;protein_id=WP_176703893.1;transl_table=11 NZ_AP024167.1 RefSeq gene 267816 268148 . - . ID=gene-VA249_RS22850;Name=VA249_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22850;old_locus_tag=VYA_43660 NZ_AP024167.1 GeneMarkS-2+ CDS 267816 268148 . - 0 ID=cds-WP_176703892.1;Parent=gene-VA249_RS22850;Dbxref=Genbank:WP_176703892.1;Name=WP_176703892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22850;product=hypothetical protein;protein_id=WP_176703892.1;transl_table=11 NZ_AP024167.1 RefSeq gene 268178 268774 . - . ID=gene-VA249_RS22855;Name=VA249_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22855;old_locus_tag=VYA_43670 NZ_AP024167.1 GeneMarkS-2+ CDS 268178 268774 . - 0 ID=cds-WP_176703891.1;Parent=gene-VA249_RS22855;Dbxref=Genbank:WP_176703891.1;Name=WP_176703891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22855;product=hypothetical protein;protein_id=WP_176703891.1;transl_table=11 NZ_AP024167.1 RefSeq gene 268859 269476 . - . ID=gene-VA249_RS22860;Name=VA249_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22860;old_locus_tag=VYA_43680 NZ_AP024167.1 GeneMarkS-2+ CDS 268859 269476 . - 0 ID=cds-WP_176703890.1;Parent=gene-VA249_RS22860;Dbxref=Genbank:WP_176703890.1;Name=WP_176703890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22860;product=hypothetical protein;protein_id=WP_176703890.1;transl_table=11 NZ_AP024167.1 RefSeq gene 269711 270937 . + . ID=gene-VA249_RS22865;Name=VA249_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22865;old_locus_tag=VYA_43690 NZ_AP024167.1 Protein Homology CDS 269711 270937 . + 0 ID=cds-WP_176703889.1-2;Parent=gene-VA249_RS22865;Dbxref=Genbank:WP_176703889.1;Name=WP_176703889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088853.1;locus_tag=VA249_RS22865;product=site-specific integrase;protein_id=WP_176703889.1;transl_table=11 NZ_AP024167.1 RefSeq gene 270934 272679 . + . ID=gene-VA249_RS22870;Name=VA249_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22870;old_locus_tag=VYA_43700 NZ_AP024167.1 Protein Homology CDS 270934 272679 . + 0 ID=cds-WP_176703888.1-2;Parent=gene-VA249_RS22870;Dbxref=Genbank:WP_176703888.1;Name=WP_176703888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088854.1;locus_tag=VA249_RS22870;product=hypothetical protein;protein_id=WP_176703888.1;transl_table=11 NZ_AP024167.1 RefSeq gene 272682 274844 . + . ID=gene-VA249_RS22875;Name=VA249_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22875;old_locus_tag=VYA_43710 NZ_AP024167.1 Protein Homology CDS 272682 274844 . + 0 ID=cds-WP_176703887.1-2;Parent=gene-VA249_RS22875;Dbxref=Genbank:WP_176703887.1;Name=WP_176703887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017088855.1;locus_tag=VA249_RS22875;product=site-specific integrase;protein_id=WP_176703887.1;transl_table=11 NZ_AP024167.1 RefSeq gene 274844 275251 . + . ID=gene-VA249_RS22880;Name=VA249_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22880;old_locus_tag=VYA_43720 NZ_AP024167.1 Protein Homology CDS 274844 275251 . + 0 ID=cds-WP_176703886.1-2;Parent=gene-VA249_RS22880;Dbxref=Genbank:WP_176703886.1;Name=WP_176703886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017074769.1;locus_tag=VA249_RS22880;product=hypothetical protein;protein_id=WP_176703886.1;transl_table=11 NZ_AP024167.1 RefSeq gene 275409 276257 . - . ID=gene-VA249_RS22885;Name=VA249_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22885;old_locus_tag=VYA_43730 NZ_AP024167.1 Protein Homology CDS 275409 276257 . - 0 ID=cds-WP_012774820.1-2;Parent=gene-VA249_RS22885;Dbxref=Genbank:WP_012774820.1;Name=WP_012774820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004741153.1;locus_tag=VA249_RS22885;product=GMA family class A beta-lactamase GMA-1;protein_id=WP_012774820.1;transl_table=11 NZ_AP024167.1 RefSeq gene 276753 277214 . - . ID=gene-VA249_RS22890;Name=VA249_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22890;old_locus_tag=VYA_43740 NZ_AP024167.1 GeneMarkS-2+ CDS 276753 277214 . - 0 ID=cds-WP_176703885.1;Parent=gene-VA249_RS22890;Dbxref=Genbank:WP_176703885.1;Name=WP_176703885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22890;product=hypothetical protein;protein_id=WP_176703885.1;transl_table=11 NZ_AP024167.1 RefSeq gene 277273 277656 . - . ID=gene-VA249_RS22895;Name=VA249_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22895;old_locus_tag=VYA_43750 NZ_AP024167.1 GeneMarkS-2+ CDS 277273 277656 . - 0 ID=cds-WP_176703884.1;Parent=gene-VA249_RS22895;Dbxref=Genbank:WP_176703884.1;Name=WP_176703884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22895;product=hypothetical protein;protein_id=WP_176703884.1;transl_table=11 NZ_AP024167.1 RefSeq gene 277649 279091 . - . ID=gene-VA249_RS22900;Name=VA249_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22900;old_locus_tag=VYA_43760 NZ_AP024167.1 GeneMarkS-2+ CDS 277649 279091 . - 0 ID=cds-WP_176703883.1;Parent=gene-VA249_RS22900;Dbxref=Genbank:WP_176703883.1;Name=WP_176703883.1;Note=This protein contains a GlyGly-CTERM protein-sorting domain%2C as detected by TIGR03501. These domains are found at the C-terminus of secreted proteins in organisms that possess both rhombosortase%2C which is an intramembrane serine proteinase (see TIGR03902)%2C and a type II secretion system (T2SS). In at least some cases%2C such as VesB from Vibrio cholerae%2C cleavage by rhombosortase is followed first by attachment of a glycerophosphoethanolamine-containing moiety%2C then by transport by the T2SS across the outer membrane and release into the medium in soluble form.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22900;product=GlyGly-CTERM sorting domain-containing protein;protein_id=WP_176703883.1;transl_table=11 NZ_AP024167.1 RefSeq gene 279176 281338 . - . ID=gene-VA249_RS22905;Name=VA249_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22905;old_locus_tag=VYA_43770 NZ_AP024167.1 GeneMarkS-2+ CDS 279176 281338 . - 0 ID=cds-WP_176703882.1;Parent=gene-VA249_RS22905;Dbxref=Genbank:WP_176703882.1;Name=WP_176703882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22905;product=hypothetical protein;protein_id=WP_176703882.1;transl_table=11 NZ_AP024167.1 RefSeq gene 281455 281655 . + . ID=gene-VA249_RS22910;Name=VA249_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22910;old_locus_tag=VYA_43780 NZ_AP024167.1 GeneMarkS-2+ CDS 281455 281655 . + 0 ID=cds-WP_176703881.1;Parent=gene-VA249_RS22910;Dbxref=Genbank:WP_176703881.1;Name=WP_176703881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22910;product=hypothetical protein;protein_id=WP_176703881.1;transl_table=11 NZ_AP024167.1 RefSeq gene 281648 282778 . + . ID=gene-VA249_RS22915;Name=VA249_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22915;old_locus_tag=VYA_43790 NZ_AP024167.1 Protein Homology CDS 281648 282778 . + 0 ID=cds-WP_176703880.1;Parent=gene-VA249_RS22915;Dbxref=Genbank:WP_176703880.1;Name=WP_176703880.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019023005.1;locus_tag=VA249_RS22915;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=WP_176703880.1;transl_table=11 NZ_AP024167.1 RefSeq gene 282867 283760 . + . ID=gene-VA249_RS22920;Name=VA249_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22920;old_locus_tag=VYA_43800 NZ_AP024167.1 GeneMarkS-2+ CDS 282867 283760 . + 0 ID=cds-WP_176703879.1;Parent=gene-VA249_RS22920;Dbxref=Genbank:WP_176703879.1;Name=WP_176703879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22920;product=hypothetical protein;protein_id=WP_176703879.1;transl_table=11 NZ_AP024167.1 RefSeq gene 283765 284565 . + . ID=gene-VA249_RS22925;Name=VA249_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22925;old_locus_tag=VYA_43810 NZ_AP024167.1 GeneMarkS-2+ CDS 283765 284565 . + 0 ID=cds-WP_221072331.1;Parent=gene-VA249_RS22925;Dbxref=Genbank:WP_221072331.1;Name=WP_221072331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22925;product=hypothetical protein;protein_id=WP_221072331.1;transl_table=11 NZ_AP024167.1 RefSeq gene 284619 285770 . - . ID=gene-VA249_RS22930;Name=VA249_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22930;old_locus_tag=VYA_43820 NZ_AP024167.1 Protein Homology CDS 284619 285770 . - 0 ID=cds-WP_221072336.1;Parent=gene-VA249_RS22930;Dbxref=Genbank:WP_221072336.1;Name=WP_221072336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014752.2;locus_tag=VA249_RS22930;product=helix-hairpin-helix domain-containing protein;protein_id=WP_221072336.1;transl_table=11 NZ_AP024167.1 RefSeq gene 285869 287656 . + . ID=gene-VA249_RS22935;Name=VA249_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22935;old_locus_tag=VYA_43830 NZ_AP024167.1 Protein Homology CDS 285869 287656 . + 0 ID=cds-WP_176703876.1;Parent=gene-VA249_RS22935;Dbxref=Genbank:WP_176703876.1;Name=WP_176703876.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025642.2;locus_tag=VA249_RS22935;product=PcfJ domain-containing protein;protein_id=WP_176703876.1;transl_table=11 NZ_AP024167.1 RefSeq gene 287697 288950 . + . ID=gene-VA249_RS22940;Name=VA249_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22940;old_locus_tag=VYA_43840 NZ_AP024167.1 Protein Homology CDS 287697 288950 . + 0 ID=cds-WP_176703875.1;Parent=gene-VA249_RS22940;Dbxref=Genbank:WP_176703875.1;Name=WP_176703875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=VA249_RS22940;product=DNA methyltransferase;protein_id=WP_176703875.1;transl_table=11 NZ_AP024167.1 RefSeq gene 288962 289330 . - . ID=gene-VA249_RS22945;Name=VA249_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22945 NZ_AP024167.1 GeneMarkS-2+ CDS 288962 289330 . - 0 ID=cds-WP_176703874.1;Parent=gene-VA249_RS22945;Dbxref=Genbank:WP_176703874.1;Name=WP_176703874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22945;product=hypothetical protein;protein_id=WP_176703874.1;transl_table=11 NZ_AP024167.1 RefSeq gene 289559 289831 . - . ID=gene-VA249_RS22950;Name=VA249_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22950;old_locus_tag=VYA_43850 NZ_AP024167.1 GeneMarkS-2+ CDS 289559 289831 . - 0 ID=cds-WP_176703873.1;Parent=gene-VA249_RS22950;Dbxref=Genbank:WP_176703873.1;Name=WP_176703873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22950;product=hypothetical protein;protein_id=WP_176703873.1;transl_table=11 NZ_AP024167.1 RefSeq gene 290031 290522 . - . ID=gene-VA249_RS22955;Name=VA249_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22955;old_locus_tag=VYA_43860 NZ_AP024167.1 GeneMarkS-2+ CDS 290031 290522 . - 0 ID=cds-WP_176703872.1;Parent=gene-VA249_RS22955;Dbxref=Genbank:WP_176703872.1;Name=WP_176703872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS22955;product=hypothetical protein;protein_id=WP_176703872.1;transl_table=11 NZ_AP024167.1 RefSeq gene 290811 291635 . - . ID=gene-VA249_RS22960;Name=VA249_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22960;old_locus_tag=VYA_43870 NZ_AP024167.1 Protein Homology CDS 290811 291635 . - 0 ID=cds-WP_176703871.1;Parent=gene-VA249_RS22960;Dbxref=Genbank:WP_176703871.1;Name=WP_176703871.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005505285.1;locus_tag=VA249_RS22960;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_176703871.1;transl_table=11 NZ_AP024167.1 RefSeq gene 291686 292525 . - . ID=gene-VA249_RS22965;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=VA249_RS22965;old_locus_tag=VYA_43880 NZ_AP024167.1 Protein Homology CDS 291686 292525 . - 0 ID=cds-WP_176703870.1;Parent=gene-VA249_RS22965;Dbxref=Genbank:WP_176703870.1;Name=WP_176703870.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015313689.1;locus_tag=VA249_RS22965;product=arabinose operon transcriptional regulator AraC;protein_id=WP_176703870.1;transl_table=11 NZ_AP024167.1 RefSeq gene 292590 293102 . - . ID=gene-VA249_RS22970;Name=VA249_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22970;old_locus_tag=VYA_43890 NZ_AP024167.1 Protein Homology CDS 292590 293102 . - 0 ID=cds-WP_176703869.1;Parent=gene-VA249_RS22970;Dbxref=Genbank:WP_176703869.1;Name=WP_176703869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017058040.1;locus_tag=VA249_RS22970;product=hypothetical protein;protein_id=WP_176703869.1;transl_table=11 NZ_AP024167.1 RefSeq gene 293151 294641 . - . ID=gene-VA249_RS22975;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=VA249_RS22975;old_locus_tag=VYA_43900 NZ_AP024167.1 Protein Homology CDS 293151 294641 . - 0 ID=cds-WP_176703868.1;Parent=gene-VA249_RS22975;Dbxref=Genbank:WP_176703868.1;Name=WP_176703868.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005477429.1;locus_tag=VA249_RS22975;product=L-arabinose isomerase;protein_id=WP_176703868.1;transl_table=11 NZ_AP024167.1 RefSeq gene 294651 295391 . - . ID=gene-VA249_RS22980;Name=VA249_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22980;old_locus_tag=VYA_43910 NZ_AP024167.1 Protein Homology CDS 294651 295391 . - 0 ID=cds-WP_176703867.1;Parent=gene-VA249_RS22980;Dbxref=Genbank:WP_176703867.1;Name=WP_176703867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447150.1;locus_tag=VA249_RS22980;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_176703867.1;transl_table=11 NZ_AP024167.1 RefSeq gene 295384 297084 . - . ID=gene-VA249_RS22985;Name=VA249_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22985;old_locus_tag=VYA_43920 NZ_AP024167.1 Protein Homology CDS 295384 297084 . - 0 ID=cds-WP_176703866.1;Parent=gene-VA249_RS22985;Dbxref=Genbank:WP_176703866.1;Name=WP_176703866.1;Ontology_term=GO:0019569,GO:0005524,GO:0008741;gbkey=CDS;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=L-arabinose catabolic process to xylulose 5-phosphate|0019569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017447151.1;locus_tag=VA249_RS22985;product=ribulokinase;protein_id=WP_176703866.1;transl_table=11 NZ_AP024167.1 RefSeq gene 297454 298452 . + . ID=gene-VA249_RS22990;Name=VA249_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS22990;old_locus_tag=VYA_43930 NZ_AP024167.1 Protein Homology CDS 297454 298452 . + 0 ID=cds-WP_176703865.1;Parent=gene-VA249_RS22990;Dbxref=Genbank:WP_176703865.1;Name=WP_176703865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020331889.1;locus_tag=VA249_RS22990;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_176703865.1;transl_table=11 NZ_AP024167.1 RefSeq gene 298512 300029 . + . ID=gene-VA249_RS22995;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=VA249_RS22995;old_locus_tag=VYA_43940 NZ_AP024167.1 Protein Homology CDS 298512 300029 . + 0 ID=cds-WP_176703864.1;Parent=gene-VA249_RS22995;Dbxref=Genbank:WP_176703864.1;Name=WP_176703864.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014235070.1;locus_tag=VA249_RS22995;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_176703864.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 300047 300535 . + . ID=gene-VA249_RS23000;Name=araH;end_range=300535,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=VA249_RS23000;old_locus_tag=VYA_43950;partial=true;pseudo=true NZ_AP024167.1 Protein Homology CDS 300047 300535 . + 0 ID=cds-VA249_RS23000;Parent=gene-VA249_RS23000;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=300535,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013855627.1;locus_tag=VA249_RS23000;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 NZ_AP024167.1 RefSeq gene 300613 301736 . + . ID=gene-VA249_RS23005;Name=VA249_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23005 NZ_AP024167.1 Protein Homology CDS 300613 300865 . + 0 ID=cds-WP_176703863.1;Parent=gene-VA249_RS23005;Dbxref=Genbank:WP_176703863.1;Name=WP_176703863.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612134.1;locus_tag=VA249_RS23005;product=IS3 family transposase;protein_id=WP_176703863.1;transl_table=11 NZ_AP024167.1 Protein Homology CDS 300865 301736 . + 2 ID=cds-WP_176703863.1;Parent=gene-VA249_RS23005;Dbxref=Genbank:WP_176703863.1;Name=WP_176703863.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612134.1;locus_tag=VA249_RS23005;product=IS3 family transposase;protein_id=WP_176703863.1;transl_table=11 NZ_AP024167.1 RefSeq gene 302230 302670 . + . ID=gene-VA249_RS23010;Name=VA249_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23010 NZ_AP024167.1 Protein Homology CDS 302230 302670 . + 0 ID=cds-WP_225923993.1;Parent=gene-VA249_RS23010;Dbxref=Genbank:WP_225923993.1;Name=WP_225923993.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033632.1;locus_tag=VA249_RS23010;product=SLATT domain-containing protein;protein_id=WP_225923993.1;transl_table=11 NZ_AP024167.1 RefSeq gene 302756 303082 . + . ID=gene-VA249_RS23015;Name=VA249_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23015;old_locus_tag=VYA_43990 NZ_AP024167.1 Protein Homology CDS 302756 303082 . + 0 ID=cds-WP_242596817.1;Parent=gene-VA249_RS23015;Dbxref=Genbank:WP_242596817.1;Name=WP_242596817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=VA249_RS23015;product=hypothetical protein;protein_id=WP_242596817.1;transl_table=11 NZ_AP024167.1 RefSeq gene 303913 305076 . - . ID=gene-VA249_RS23020;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=VA249_RS23020;old_locus_tag=VYA_44000 NZ_AP024167.1 Protein Homology CDS 303913 305076 . - 0 ID=cds-WP_025789573.1;Parent=gene-VA249_RS23020;Dbxref=Genbank:WP_025789573.1;Name=WP_025789573.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004734423.1;locus_tag=VA249_RS23020;product=galactokinase;protein_id=WP_025789573.1;transl_table=11 NZ_AP024167.1 RefSeq gene 305194 306246 . - . ID=gene-VA249_RS23025;Name=VA249_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23025;old_locus_tag=VYA_44010 NZ_AP024167.1 Protein Homology CDS 305194 306246 . - 0 ID=cds-WP_025789574.1;Parent=gene-VA249_RS23025;Dbxref=Genbank:WP_025789574.1;Name=WP_025789574.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020335215.1;locus_tag=VA249_RS23025;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_025789574.1;transl_table=11 NZ_AP024167.1 RefSeq gene 306323 307342 . - . ID=gene-VA249_RS23030;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=VA249_RS23030;old_locus_tag=VYA_44020 NZ_AP024167.1 Protein Homology CDS 306323 307342 . - 0 ID=cds-WP_025789575.1;Parent=gene-VA249_RS23030;Dbxref=Genbank:WP_025789575.1;Name=WP_025789575.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015297204.1;locus_tag=VA249_RS23030;product=UDP-glucose 4-epimerase GalE;protein_id=WP_025789575.1;transl_table=11 NZ_AP024167.1 RefSeq gene 307386 309119 . - . ID=gene-VA249_RS23035;Name=VA249_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23035;old_locus_tag=VYA_44030 NZ_AP024167.1 Protein Homology CDS 307386 309119 . - 0 ID=cds-WP_025789576.1;Parent=gene-VA249_RS23035;Dbxref=Genbank:WP_025789576.1;Name=WP_025789576.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=VA249_RS23035;product=methyl-accepting chemotaxis protein;protein_id=WP_025789576.1;transl_table=11 NZ_AP024167.1 RefSeq pseudogene 309167 309400 . - . ID=gene-VA249_RS23040;Name=VA249_RS23040;end_range=309400,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS23040;old_locus_tag=VYA_44040;partial=true;pseudo=true NZ_AP024167.1 Protein Homology CDS 309167 309400 . - 0 ID=cds-VA249_RS23040;Parent=gene-VA249_RS23040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=309400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_064624027.1;locus_tag=VA249_RS23040;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AP024167.1 RefSeq gene 309461 310492 . - . ID=gene-VA249_RS23045;Name=VA249_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23045;old_locus_tag=VYA_44050 NZ_AP024167.1 Protein Homology CDS 309461 310492 . - 0 ID=cds-WP_176703861.1;Parent=gene-VA249_RS23045;Dbxref=Genbank:WP_176703861.1;Name=WP_176703861.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001898375.1;locus_tag=VA249_RS23045;product=IS630 family transposase;protein_id=WP_176703861.1;transl_table=11 NZ_AP024167.1 RefSeq gene 310682 311944 . - . ID=gene-VA249_RS23050;Name=VA249_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23050;old_locus_tag=VYA_44060 NZ_AP024167.1 Protein Homology CDS 310682 311944 . - 0 ID=cds-WP_031501606.1;Parent=gene-VA249_RS23050;Dbxref=Genbank:WP_031501606.1;Name=WP_031501606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205198.1;locus_tag=VA249_RS23050;product=maltoporin;protein_id=WP_031501606.1;transl_table=11 NZ_AP024167.1 RefSeq gene 312093 314159 . - . ID=gene-VA249_RS23055;Name=VA249_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23055;old_locus_tag=VYA_44070 NZ_AP024167.1 Protein Homology CDS 312093 314159 . - 0 ID=cds-WP_176703860.1;Parent=gene-VA249_RS23055;Dbxref=Genbank:WP_176703860.1;Name=WP_176703860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004726158.1;locus_tag=VA249_RS23055;product=beta-galactosidase;protein_id=WP_176703860.1;transl_table=11 NZ_AP024167.1 RefSeq gene 314159 315391 . - . ID=gene-VA249_RS23060;Name=VA249_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23060;old_locus_tag=VYA_44080 NZ_AP024167.1 Protein Homology CDS 314159 315391 . - 0 ID=cds-WP_176703859.1;Parent=gene-VA249_RS23060;Dbxref=Genbank:WP_176703859.1;Name=WP_176703859.1;Ontology_term=GO:0015926;gbkey=CDS;go_function=glucosidase activity|0015926||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205200.1;locus_tag=VA249_RS23060;product=glycosyl hydrolase 53 family protein;protein_id=WP_176703859.1;transl_table=11 NZ_AP024167.1 RefSeq gene 315408 316250 . - . ID=gene-VA249_RS23065;Name=VA249_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23065;old_locus_tag=VYA_44090 NZ_AP024167.1 Protein Homology CDS 315408 316250 . - 0 ID=cds-WP_025789580.1;Parent=gene-VA249_RS23065;Dbxref=Genbank:WP_025789580.1;Name=WP_025789580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022608.1;locus_tag=VA249_RS23065;product=sugar ABC transporter permease;protein_id=WP_025789580.1;transl_table=11 NZ_AP024167.1 RefSeq gene 316255 317550 . - . ID=gene-VA249_RS23070;Name=VA249_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23070;old_locus_tag=VYA_44100 NZ_AP024167.1 Protein Homology CDS 316255 317550 . - 0 ID=cds-WP_044140067.1;Parent=gene-VA249_RS23070;Dbxref=Genbank:WP_044140067.1;Name=WP_044140067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205201.1;locus_tag=VA249_RS23070;product=sugar ABC transporter permease;protein_id=WP_044140067.1;transl_table=11 NZ_AP024167.1 RefSeq gene 317662 318897 . - . ID=gene-VA249_RS23075;Name=VA249_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23075;old_locus_tag=VYA_44110 NZ_AP024167.1 Protein Homology CDS 317662 318897 . - 0 ID=cds-WP_025789582.1;Parent=gene-VA249_RS23075;Dbxref=Genbank:WP_025789582.1;Name=WP_025789582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205202.1;locus_tag=VA249_RS23075;product=extracellular solute-binding protein;protein_id=WP_025789582.1;transl_table=11 NZ_AP024167.1 RefSeq gene 319113 320216 . + . ID=gene-VA249_RS21490;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=VA249_RS21490 NZ_AP024167.1 Protein Homology CDS 319113 320216 . + 0 ID=cds-WP_025789583.1;Parent=gene-VA249_RS21490;Dbxref=Genbank:WP_025789583.1;Name=WP_025789583.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014205203.1;locus_tag=VA249_RS21490;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_025789583.1;transl_table=11 ##sequence-region NZ_AP024168.1 1 221076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1074311 NZ_AP024168.1 RefSeq region 1 221076 . + . ID=NZ_AP024168.1:1..221076;Dbxref=taxon:1074311;Is_circular=true;Name=pYa108;collection-date=2004-05-14;country=Japan:Kagawa;gbkey=Src;genome=plasmid;isolation-source=sediment [ENVO_00002007];lat-lon=34.381478 N 134.100808 E;mol_type=genomic DNA;plasmid-name=pYa108;strain=04Ya108 NZ_AP024168.1 RefSeq gene 553 1659 . - . ID=gene-VA249_RS23085;Name=VA249_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23085;old_locus_tag=VYA_44120 NZ_AP024168.1 Protein Homology CDS 553 1659 . - 0 ID=cds-WP_221072499.1;Parent=gene-VA249_RS23085;Dbxref=Genbank:WP_221072499.1;Name=WP_221072499.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017819754.1;locus_tag=VA249_RS23085;product=putative 2-aminoethylphosphonate ABC transporter ATP-binding protein;protein_id=WP_221072499.1;transl_table=11 NZ_AP024168.1 RefSeq gene 1984 2994 . - . ID=gene-VA249_RS23090;Name=VA249_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23090;old_locus_tag=VYA_44130 NZ_AP024168.1 Protein Homology CDS 1984 2994 . - 0 ID=cds-WP_221072501.1;Parent=gene-VA249_RS23090;Dbxref=Genbank:WP_221072501.1;Name=WP_221072501.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017075813.1;locus_tag=VA249_RS23090;product=putative 2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_221072501.1;transl_table=11 NZ_AP024168.1 RefSeq gene 3261 4364 . + . ID=gene-VA249_RS23095;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=VA249_RS23095;old_locus_tag=VYA_44140 NZ_AP024168.1 Protein Homology CDS 3261 4364 . + 0 ID=cds-WP_221072503.1;Parent=gene-VA249_RS23095;Dbxref=Genbank:WP_221072503.1;Name=WP_221072503.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004749659.1;locus_tag=VA249_RS23095;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_221072503.1;transl_table=11 NZ_AP024168.1 RefSeq gene 4391 5770 . + . ID=gene-VA249_RS23100;Name=VA249_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23100;old_locus_tag=VYA_44150 NZ_AP024168.1 Protein Homology CDS 4391 5770 . + 0 ID=cds-WP_221072504.1;Parent=gene-VA249_RS23100;Dbxref=Genbank:WP_221072504.1;Name=WP_221072504.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374071.1;locus_tag=VA249_RS23100;product=aspartate aminotransferase family protein;protein_id=WP_221072504.1;transl_table=11 NZ_AP024168.1 RefSeq gene 5860 6675 . + . ID=gene-VA249_RS23105;Name=VA249_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23105;old_locus_tag=VYA_44160 NZ_AP024168.1 Protein Homology CDS 5860 6675 . + 0 ID=cds-WP_221072507.1;Parent=gene-VA249_RS23105;Dbxref=Genbank:WP_221072507.1;Name=WP_221072507.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999177.1;locus_tag=VA249_RS23105;product=phosphonoacetaldehyde hydrolase;protein_id=WP_221072507.1;transl_table=11 NZ_AP024168.1 RefSeq gene 7259 7795 . + . ID=gene-VA249_RS23110;Name=VA249_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23110;old_locus_tag=VYA_44180 NZ_AP024168.1 Protein Homology CDS 7259 7795 . + 0 ID=cds-WP_221072509.1;Parent=gene-VA249_RS23110;Dbxref=Genbank:WP_221072509.1;Name=WP_221072509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728484.1;locus_tag=VA249_RS23110;product=nuclear transport factor 2 family protein;protein_id=WP_221072509.1;transl_table=11 NZ_AP024168.1 RefSeq gene 7889 8941 . + . ID=gene-VA249_RS23115;Name=VA249_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23115;old_locus_tag=VYA_44190 NZ_AP024168.1 Protein Homology CDS 7889 8941 . + 0 ID=cds-WP_221072511.1;Parent=gene-VA249_RS23115;Dbxref=Genbank:WP_221072511.1;Name=WP_221072511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019474.2;locus_tag=VA249_RS23115;product=alpha/beta hydrolase;protein_id=WP_221072511.1;transl_table=11 NZ_AP024168.1 RefSeq gene 9299 9835 . + . ID=gene-VA249_RS23120;Name=VA249_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23120;old_locus_tag=VYA_44200 NZ_AP024168.1 Protein Homology CDS 9299 9835 . + 0 ID=cds-WP_221072513.1;Parent=gene-VA249_RS23120;Dbxref=Genbank:WP_221072513.1;Name=WP_221072513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696401.1;locus_tag=VA249_RS23120;product=redoxin family protein;protein_id=WP_221072513.1;transl_table=11 NZ_AP024168.1 RefSeq gene 9976 10341 . - . ID=gene-VA249_RS23125;Name=VA249_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23125;old_locus_tag=VYA_44210 NZ_AP024168.1 Protein Homology CDS 9976 10341 . - 0 ID=cds-WP_221072514.1;Parent=gene-VA249_RS23125;Dbxref=Genbank:WP_221072514.1;Name=WP_221072514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014234397.1;locus_tag=VA249_RS23125;product=helix-turn-helix transcriptional regulator;protein_id=WP_221072514.1;transl_table=11 NZ_AP024168.1 RefSeq gene 10496 11080 . - . ID=gene-VA249_RS23130;Name=VA249_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23130;old_locus_tag=VYA_44220 NZ_AP024168.1 Protein Homology CDS 10496 11080 . - 0 ID=cds-WP_221072515.1;Parent=gene-VA249_RS23130;Dbxref=Genbank:WP_221072515.1;Name=WP_221072515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009696403.1;locus_tag=VA249_RS23130;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_221072515.1;transl_table=11 NZ_AP024168.1 RefSeq gene 11615 12667 . - . ID=gene-VA249_RS23135;Name=VA249_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23135;old_locus_tag=VYA_44230 NZ_AP024168.1 Protein Homology CDS 11615 12667 . - 0 ID=cds-WP_221072516.1;Parent=gene-VA249_RS23135;Dbxref=Genbank:WP_221072516.1;Name=WP_221072516.1;Ontology_term=GO:0006520,GO:0047689;gbkey=CDS;go_function=aspartate racemase activity|0047689||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017011673.1;locus_tag=VA249_RS23135;product=amino acid racemase;protein_id=WP_221072516.1;transl_table=11 NZ_AP024168.1 RefSeq gene 13105 13860 . - . ID=gene-VA249_RS23140;Name=VA249_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23140;old_locus_tag=VYA_44240 NZ_AP024168.1 Protein Homology CDS 13105 13860 . - 0 ID=cds-WP_221072517.1;Parent=gene-VA249_RS23140;Dbxref=Genbank:WP_221072517.1;Name=WP_221072517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196330.1;locus_tag=VA249_RS23140;product=phosphatase PAP2 family protein;protein_id=WP_221072517.1;transl_table=11 NZ_AP024168.1 RefSeq gene 14242 15627 . - . ID=gene-VA249_RS23145;Name=VA249_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23145;old_locus_tag=VYA_44250 NZ_AP024168.1 Protein Homology CDS 14242 15627 . - 0 ID=cds-WP_199453839.1;Parent=gene-VA249_RS23145;Dbxref=Genbank:WP_199453839.1;Name=WP_199453839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014081.2;locus_tag=VA249_RS23145;product=amidohydrolase family protein;protein_id=WP_199453839.1;transl_table=11 NZ_AP024168.1 RefSeq gene 15759 16763 . - . ID=gene-VA249_RS23150;Name=VA249_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23150;old_locus_tag=VYA_44260 NZ_AP024168.1 Protein Homology CDS 15759 16763 . - 0 ID=cds-WP_221072518.1;Parent=gene-VA249_RS23150;Dbxref=Genbank:WP_221072518.1;Name=WP_221072518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=VA249_RS23150;product=helix-turn-helix transcriptional regulator;protein_id=WP_221072518.1;transl_table=11 NZ_AP024168.1 RefSeq gene 16904 17296 . + . ID=gene-VA249_RS23155;Name=VA249_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23155;old_locus_tag=VYA_44270 NZ_AP024168.1 GeneMarkS-2+ CDS 16904 17296 . + 0 ID=cds-WP_221072519.1;Parent=gene-VA249_RS23155;Dbxref=Genbank:WP_221072519.1;Name=WP_221072519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23155;product=hypothetical protein;protein_id=WP_221072519.1;transl_table=11 NZ_AP024168.1 RefSeq gene 17432 18418 . + . ID=gene-VA249_RS23160;Name=VA249_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23160;old_locus_tag=VYA_44280 NZ_AP024168.1 GeneMarkS-2+ CDS 17432 18418 . + 0 ID=cds-WP_221072520.1;Parent=gene-VA249_RS23160;Dbxref=Genbank:WP_221072520.1;Name=WP_221072520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23160;product=hypothetical protein;protein_id=WP_221072520.1;transl_table=11 NZ_AP024168.1 RefSeq gene 18367 18729 . + . ID=gene-VA249_RS23165;Name=VA249_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23165;old_locus_tag=VYA_44290 NZ_AP024168.1 Protein Homology CDS 18367 18729 . + 0 ID=cds-WP_221072521.1;Parent=gene-VA249_RS23165;Dbxref=Genbank:WP_221072521.1;Name=WP_221072521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016830.2;locus_tag=VA249_RS23165;product=carbohydrate porin;protein_id=WP_221072521.1;transl_table=11 NZ_AP024168.1 RefSeq gene 18909 19748 . + . ID=gene-VA249_RS23170;Name=VA249_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23170;old_locus_tag=VYA_44300 NZ_AP024168.1 Protein Homology CDS 18909 19748 . + 0 ID=cds-WP_199453833.1;Parent=gene-VA249_RS23170;Dbxref=Genbank:WP_199453833.1;Name=WP_199453833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017082542.1;locus_tag=VA249_RS23170;product=hypothetical protein;protein_id=WP_199453833.1;transl_table=11 NZ_AP024168.1 RefSeq gene 21990 22400 . + . ID=gene-VA249_RS23175;Name=VA249_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23175;old_locus_tag=VYA_44340 NZ_AP024168.1 GeneMarkS-2+ CDS 21990 22400 . + 0 ID=cds-WP_221072522.1;Parent=gene-VA249_RS23175;Dbxref=Genbank:WP_221072522.1;Name=WP_221072522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23175;product=hypothetical protein;protein_id=WP_221072522.1;transl_table=11 NZ_AP024168.1 RefSeq gene 22659 22796 . + . ID=gene-VA249_RS23180;Name=VA249_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23180 NZ_AP024168.1 GeneMarkS-2+ CDS 22659 22796 . + 0 ID=cds-WP_221072523.1;Parent=gene-VA249_RS23180;Dbxref=Genbank:WP_221072523.1;Name=WP_221072523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23180;product=hypothetical protein;protein_id=WP_221072523.1;transl_table=11 NZ_AP024168.1 RefSeq gene 23219 24154 . - . ID=gene-VA249_RS23185;Name=VA249_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23185;old_locus_tag=VYA_44350 NZ_AP024168.1 Protein Homology CDS 23219 24154 . - 0 ID=cds-WP_221072526.1;Parent=gene-VA249_RS23185;Dbxref=Genbank:WP_221072526.1;Name=WP_221072526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277212.1;locus_tag=VA249_RS23185;product=OB-fold domain-containing protein;protein_id=WP_221072526.1;transl_table=11 NZ_AP024168.1 RefSeq gene 24158 25369 . - . ID=gene-VA249_RS23190;Name=VA249_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23190;old_locus_tag=VYA_44360 NZ_AP024168.1 Protein Homology CDS 24158 25369 . - 0 ID=cds-WP_221072528.1;Parent=gene-VA249_RS23190;Dbxref=Genbank:WP_221072528.1;Name=WP_221072528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010656624.1;locus_tag=VA249_RS23190;product=thiolase family protein;protein_id=WP_221072528.1;transl_table=11 NZ_AP024168.1 RefSeq gene 25386 27275 . - . ID=gene-VA249_RS23195;Name=VA249_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23195;old_locus_tag=VYA_44370 NZ_AP024168.1 Protein Homology CDS 25386 27275 . - 0 ID=cds-WP_225927173.1;Parent=gene-VA249_RS23195;Dbxref=Genbank:WP_225927173.1;Name=WP_225927173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018991378.1;locus_tag=VA249_RS23195;product=long-chain-acyl-CoA synthetase;protein_id=WP_225927173.1;transl_table=11 NZ_AP024168.1 RefSeq gene 27593 28423 . + . ID=gene-VA249_RS23200;Name=VA249_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23200;old_locus_tag=VYA_44380 NZ_AP024168.1 Protein Homology CDS 27593 28423 . + 0 ID=cds-WP_221072666.1;Parent=gene-VA249_RS23200;Dbxref=Genbank:WP_221072666.1;Name=WP_221072666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019826404.1;locus_tag=VA249_RS23200;product=alpha/beta fold hydrolase;protein_id=WP_221072666.1;transl_table=11 NZ_AP024168.1 RefSeq gene 28442 30559 . + . ID=gene-VA249_RS23205;Name=VA249_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23205;old_locus_tag=VYA_44390 NZ_AP024168.1 Protein Homology CDS 28442 30559 . + 0 ID=cds-WP_221072531.1;Parent=gene-VA249_RS23205;Dbxref=Genbank:WP_221072531.1;Name=WP_221072531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008843782.1;locus_tag=VA249_RS23205;product=FAD-dependent oxidoreductase;protein_id=WP_221072531.1;transl_table=11 NZ_AP024168.1 RefSeq gene 30644 32065 . + . ID=gene-VA249_RS23210;Name=VA249_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23210;old_locus_tag=VYA_44400 NZ_AP024168.1 Protein Homology CDS 30644 32065 . + 0 ID=cds-WP_221072533.1;Parent=gene-VA249_RS23210;Dbxref=Genbank:WP_221072533.1;Name=WP_221072533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277181.1;locus_tag=VA249_RS23210;product=coniferyl aldehyde dehydrogenase;protein_id=WP_221072533.1;transl_table=11 NZ_AP024168.1 RefSeq gene 32843 33919 . - . ID=gene-VA249_RS23215;Name=VA249_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23215;old_locus_tag=VYA_44410 NZ_AP024168.1 Protein Homology CDS 32843 33919 . - 0 ID=cds-WP_210205399.1;Parent=gene-VA249_RS23215;Dbxref=Genbank:WP_210205399.1;Name=WP_210205399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005536335.1;locus_tag=VA249_RS23215;product=RepB family plasmid replication initiator protein;protein_id=WP_210205399.1;transl_table=11 NZ_AP024168.1 RefSeq gene 34590 36989 . - . ID=gene-VA249_RS23220;Name=VA249_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23220;old_locus_tag=VYA_44420 NZ_AP024168.1 Protein Homology CDS 34590 36989 . - 0 ID=cds-WP_221072535.1;Parent=gene-VA249_RS23220;Dbxref=Genbank:WP_221072535.1;Name=WP_221072535.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324647.1;locus_tag=VA249_RS23220;product=MMPL family transporter;protein_id=WP_221072535.1;transl_table=11 NZ_AP024168.1 RefSeq gene 37007 38017 . - . ID=gene-VA249_RS23225;Name=VA249_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23225;old_locus_tag=VYA_44430 NZ_AP024168.1 Protein Homology CDS 37007 38017 . - 0 ID=cds-WP_221072537.1;Parent=gene-VA249_RS23225;Dbxref=Genbank:WP_221072537.1;Name=WP_221072537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324648.1;locus_tag=VA249_RS23225;product=YCF48-related protein;protein_id=WP_221072537.1;transl_table=11 NZ_AP024168.1 RefSeq gene 38261 39784 . - . ID=gene-VA249_RS23230;Name=VA249_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23230;old_locus_tag=VYA_44440 NZ_AP024168.1 Protein Homology CDS 38261 39784 . - 0 ID=cds-WP_225927169.1;Parent=gene-VA249_RS23230;Dbxref=Genbank:WP_225927169.1;Name=WP_225927169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277226.1;locus_tag=VA249_RS23230;product=DUF1302 family protein;protein_id=WP_225927169.1;transl_table=11 NZ_AP024168.1 RefSeq gene 39800 41185 . - . ID=gene-VA249_RS23235;Name=VA249_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23235;old_locus_tag=VYA_44450 NZ_AP024168.1 Protein Homology CDS 39800 41185 . - 0 ID=cds-WP_221072539.1;Parent=gene-VA249_RS23235;Dbxref=Genbank:WP_221072539.1;Name=WP_221072539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324631.1;locus_tag=VA249_RS23235;product=outer membrane lipoprotein-sorting protein;protein_id=WP_221072539.1;transl_table=11 NZ_AP024168.1 RefSeq gene 41434 42402 . + . ID=gene-VA249_RS23240;Name=VA249_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23240;old_locus_tag=VYA_44460 NZ_AP024168.1 Protein Homology CDS 41434 42402 . + 0 ID=cds-WP_221072541.1;Parent=gene-VA249_RS23240;Dbxref=Genbank:WP_221072541.1;Name=WP_221072541.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324627.1;locus_tag=VA249_RS23240;product=flavin reductase;protein_id=WP_221072541.1;transl_table=11 NZ_AP024168.1 RefSeq gene 42413 43210 . + . ID=gene-VA249_RS23245;Name=VA249_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23245;old_locus_tag=VYA_44470 NZ_AP024168.1 Protein Homology CDS 42413 43210 . + 0 ID=cds-WP_221072551.1;Parent=gene-VA249_RS23245;Dbxref=Genbank:WP_221072551.1;Name=WP_221072551.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324625.1;locus_tag=VA249_RS23245;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_221072551.1;transl_table=11 NZ_AP024168.1 RefSeq gene 43257 44159 . + . ID=gene-VA249_RS23250;Name=VA249_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23250;old_locus_tag=VYA_44480 NZ_AP024168.1 Protein Homology CDS 43257 44159 . + 0 ID=cds-WP_128813540.1;Parent=gene-VA249_RS23250;Dbxref=Genbank:WP_128813540.1;Name=WP_128813540.1;Ontology_term=GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011765706.1;locus_tag=VA249_RS23250;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_128813540.1;transl_table=11 NZ_AP024168.1 RefSeq gene 44170 45192 . + . ID=gene-VA249_RS23255;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=VA249_RS23255;old_locus_tag=VYA_44490 NZ_AP024168.1 Protein Homology CDS 44170 45192 . + 0 ID=cds-WP_221072553.1;Parent=gene-VA249_RS23255;Dbxref=Genbank:WP_221072553.1;Name=WP_221072553.1;Ontology_term=GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277177.1;locus_tag=VA249_RS23255;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_221072553.1;transl_table=11 NZ_AP024168.1 RefSeq gene 45215 45994 . + . ID=gene-VA249_RS23260;Name=VA249_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23260;old_locus_tag=VYA_44500 NZ_AP024168.1 Protein Homology CDS 45215 45994 . + 0 ID=cds-WP_210205301.1;Parent=gene-VA249_RS23260;Dbxref=Genbank:WP_210205301.1;Name=WP_210205301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003446472.1;locus_tag=VA249_RS23260;product=SDR family oxidoreductase;protein_id=WP_210205301.1;transl_table=11 NZ_AP024168.1 RefSeq gene 46443 47519 . - . ID=gene-VA249_RS23265;Name=VA249_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23265;old_locus_tag=VYA_44510 NZ_AP024168.1 Protein Homology CDS 46443 47519 . - 0 ID=cds-WP_221072555.1;Parent=gene-VA249_RS23265;Dbxref=Genbank:WP_221072555.1;Name=WP_221072555.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017061984.1;locus_tag=VA249_RS23265;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_221072555.1;transl_table=11 NZ_AP024168.1 RefSeq gene 47519 48718 . - . ID=gene-VA249_RS23270;Name=VA249_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23270;old_locus_tag=VYA_44520 NZ_AP024168.1 Protein Homology CDS 47519 48718 . - 0 ID=cds-WP_128813537.1;Parent=gene-VA249_RS23270;Dbxref=Genbank:WP_128813537.1;Name=WP_128813537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006958798.1;locus_tag=VA249_RS23270;product=ParA family protein;protein_id=WP_128813537.1;transl_table=11 NZ_AP024168.1 RefSeq gene 48926 50017 . - . ID=gene-VA249_RS23275;Name=VA249_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23275;old_locus_tag=VYA_44530 NZ_AP024168.1 Protein Homology CDS 48926 50017 . - 0 ID=cds-WP_221072564.1;Parent=gene-VA249_RS23275;Dbxref=Genbank:WP_221072564.1;Name=WP_221072564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008843814.1;locus_tag=VA249_RS23275;product=Rieske (2Fe-2S) protein;protein_id=WP_221072564.1;transl_table=11 NZ_AP024168.1 RefSeq gene 50010 51398 . - . ID=gene-VA249_RS23280;Name=VA249_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23280;old_locus_tag=VYA_44540 NZ_AP024168.1 Protein Homology CDS 50010 51398 . - 0 ID=cds-WP_221072566.1;Parent=gene-VA249_RS23280;Dbxref=Genbank:WP_221072566.1;Name=WP_221072566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008843815.1;locus_tag=VA249_RS23280;product=MFS transporter;protein_id=WP_221072566.1;transl_table=11 NZ_AP024168.1 RefSeq gene 51647 52735 . + . ID=gene-VA249_RS23285;Name=VA249_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23285;old_locus_tag=VYA_44550 NZ_AP024168.1 Protein Homology CDS 51647 52735 . + 0 ID=cds-WP_221072569.1;Parent=gene-VA249_RS23285;Dbxref=Genbank:WP_221072569.1;Name=WP_221072569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=VA249_RS23285;product=MBL fold metallo-hydrolase;protein_id=WP_221072569.1;transl_table=11 NZ_AP024168.1 RefSeq gene 52749 54464 . + . ID=gene-VA249_RS23290;Name=VA249_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23290;old_locus_tag=VYA_44560 NZ_AP024168.1 Protein Homology CDS 52749 54464 . + 0 ID=cds-WP_221072570.1;Parent=gene-VA249_RS23290;Dbxref=Genbank:WP_221072570.1;Name=WP_221072570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012155360.1;locus_tag=VA249_RS23290;product=acyl--CoA ligase;protein_id=WP_221072570.1;transl_table=11 NZ_AP024168.1 RefSeq gene 54508 56265 . + . ID=gene-VA249_RS23295;Name=VA249_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23295;old_locus_tag=VYA_44570 NZ_AP024168.1 Protein Homology CDS 54508 56265 . + 0 ID=cds-WP_221072572.1;Parent=gene-VA249_RS23295;Dbxref=Genbank:WP_221072572.1;Name=WP_221072572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019821808.1;locus_tag=VA249_RS23295;product=FAD-binding protein;protein_id=WP_221072572.1;transl_table=11 NZ_AP024168.1 RefSeq gene 56295 57893 . + . ID=gene-VA249_RS23300;Name=VA249_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23300;old_locus_tag=VYA_44580 NZ_AP024168.1 Protein Homology CDS 56295 57893 . + 0 ID=cds-WP_221072574.1;Parent=gene-VA249_RS23300;Dbxref=Genbank:WP_221072574.1;Name=WP_221072574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937700.1;locus_tag=VA249_RS23300;product=FadD3 family acyl-CoA ligase;protein_id=WP_221072574.1;transl_table=11 NZ_AP024168.1 RefSeq gene 58038 58853 . + . ID=gene-VA249_RS23305;Name=VA249_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23305;old_locus_tag=VYA_44590 NZ_AP024168.1 Protein Homology CDS 58038 58853 . + 0 ID=cds-WP_221072576.1;Parent=gene-VA249_RS23305;Dbxref=Genbank:WP_221072576.1;Name=WP_221072576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324651.1;locus_tag=VA249_RS23305;product=SDR family oxidoreductase;protein_id=WP_221072576.1;transl_table=11 NZ_AP024168.1 RefSeq gene 58864 59997 . + . ID=gene-VA249_RS23310;Name=VA249_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23310;old_locus_tag=VYA_44600 NZ_AP024168.1 Protein Homology CDS 58864 59997 . + 0 ID=cds-WP_225927170.1;Parent=gene-VA249_RS23310;Dbxref=Genbank:WP_225927170.1;Name=WP_225927170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925067.1;locus_tag=VA249_RS23310;product=alkene reductase;protein_id=WP_225927170.1;transl_table=11 NZ_AP024168.1 RefSeq gene 60013 60744 . + . ID=gene-VA249_RS23315;Name=VA249_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23315;old_locus_tag=VYA_44610 NZ_AP024168.1 Protein Homology CDS 60013 60744 . + 0 ID=cds-WP_221072577.1;Parent=gene-VA249_RS23315;Dbxref=Genbank:WP_221072577.1;Name=WP_221072577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003445112.1;locus_tag=VA249_RS23315;product=SDR family oxidoreductase;protein_id=WP_221072577.1;transl_table=11 NZ_AP024168.1 RefSeq gene 60755 61390 . + . ID=gene-VA249_RS23320;Name=VA249_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23320;old_locus_tag=VYA_44620 NZ_AP024168.1 Protein Homology CDS 60755 61390 . + 0 ID=cds-WP_221072578.1;Parent=gene-VA249_RS23320;Dbxref=Genbank:WP_221072578.1;Name=WP_221072578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011327588.1;locus_tag=VA249_RS23320;product=nuclear transport factor 2 family protein;protein_id=WP_221072578.1;transl_table=11 NZ_AP024168.1 RefSeq gene 61901 62629 . + . ID=gene-VA249_RS23325;Name=VA249_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23325;old_locus_tag=VYA_44630 NZ_AP024168.1 Protein Homology CDS 61901 62629 . + 0 ID=cds-WP_221072579.1;Parent=gene-VA249_RS23325;Dbxref=Genbank:WP_221072579.1;Name=WP_221072579.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019225.2;locus_tag=VA249_RS23325;product=PEP-CTERM sorting domain-containing protein;protein_id=WP_221072579.1;transl_table=11 NZ_AP024168.1 RefSeq gene 63060 67136 . + . ID=gene-VA249_RS23330;Name=VA249_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23330;old_locus_tag=VYA_44640 NZ_AP024168.1 Protein Homology CDS 63060 67136 . + 0 ID=cds-WP_221072581.1;Parent=gene-VA249_RS23330;Dbxref=Genbank:WP_221072581.1;Name=WP_221072581.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038322.1;locus_tag=VA249_RS23330;product=ImpA family metalloprotease;protein_id=WP_221072581.1;transl_table=11 NZ_AP024168.1 RefSeq gene 67418 68203 . + . ID=gene-VA249_RS23335;Name=VA249_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23335;old_locus_tag=VYA_44650 NZ_AP024168.1 Protein Homology CDS 67418 68203 . + 0 ID=cds-WP_221072673.1;Parent=gene-VA249_RS23335;Dbxref=Genbank:WP_221072673.1;Name=WP_221072673.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008020850.1;locus_tag=VA249_RS23335;product=SDR family oxidoreductase;protein_id=WP_221072673.1;transl_table=11 NZ_AP024168.1 RefSeq gene 68216 68677 . + . ID=gene-VA249_RS23340;Name=VA249_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23340;old_locus_tag=VYA_44660 NZ_AP024168.1 Protein Homology CDS 68216 68677 . + 0 ID=cds-WP_221072583.1;Parent=gene-VA249_RS23340;Dbxref=Genbank:WP_221072583.1;Name=WP_221072583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277229.1;locus_tag=VA249_RS23340;product=MaoC family dehydratase;protein_id=WP_221072583.1;transl_table=11 NZ_AP024168.1 RefSeq gene 68694 69899 . + . ID=gene-VA249_RS23345;Name=VA249_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23345;old_locus_tag=VYA_44670 NZ_AP024168.1 Protein Homology CDS 68694 69899 . + 0 ID=cds-WP_221072586.1;Parent=gene-VA249_RS23345;Dbxref=Genbank:WP_221072586.1;Name=WP_221072586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010322477.1;locus_tag=VA249_RS23345;product=thiolase family protein;protein_id=WP_221072586.1;transl_table=11 NZ_AP024168.1 RefSeq gene 69911 70720 . + . ID=gene-VA249_RS23350;Name=VA249_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23350;old_locus_tag=VYA_44680 NZ_AP024168.1 Protein Homology CDS 69911 70720 . + 0 ID=cds-WP_221072588.1;Parent=gene-VA249_RS23350;Dbxref=Genbank:WP_221072588.1;Name=WP_221072588.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012596.2;locus_tag=VA249_RS23350;product=enoyl-CoA hydratase-related protein;protein_id=WP_221072588.1;transl_table=11 NZ_AP024168.1 RefSeq gene 70737 72377 . + . ID=gene-VA249_RS23355;Name=VA249_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23355;old_locus_tag=VYA_44690 NZ_AP024168.1 Protein Homology CDS 70737 72377 . + 0 ID=cds-WP_221072590.1;Parent=gene-VA249_RS23355;Dbxref=Genbank:WP_221072590.1;Name=WP_221072590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010322648.1;locus_tag=VA249_RS23355;product=electron-transfer flavoprotein:ubiquinone oxidoreductase;protein_id=WP_221072590.1;transl_table=11 NZ_AP024168.1 RefSeq gene 72444 73349 . - . ID=gene-VA249_RS23360;Name=VA249_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23360;old_locus_tag=VYA_44700 NZ_AP024168.1 Protein Homology CDS 72444 73349 . - 0 ID=cds-WP_221072591.1;Parent=gene-VA249_RS23360;Dbxref=Genbank:WP_221072591.1;Name=WP_221072591.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=VA249_RS23360;product=sensor domain-containing diguanylate cyclase;protein_id=WP_221072591.1;transl_table=11 NZ_AP024168.1 RefSeq gene 73659 74570 . + . ID=gene-VA249_RS23365;Name=VA249_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23365;old_locus_tag=VYA_44710 NZ_AP024168.1 Protein Homology CDS 73659 74570 . + 0 ID=cds-WP_225927171.1;Parent=gene-VA249_RS23365;Dbxref=Genbank:WP_225927171.1;Name=WP_225927171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012584881.1;locus_tag=VA249_RS23365;product=PEP-CTERM sorting domain-containing protein;protein_id=WP_225927171.1;transl_table=11 NZ_AP024168.1 RefSeq gene 74766 75527 . - . ID=gene-VA249_RS23370;Name=VA249_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23370;old_locus_tag=VYA_44720 NZ_AP024168.1 Protein Homology CDS 74766 75527 . - 0 ID=cds-WP_225927172.1;Parent=gene-VA249_RS23370;Dbxref=Genbank:WP_225927172.1;Name=WP_225927172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016403878.1;locus_tag=VA249_RS23370;product=S1C family serine protease;protein_id=WP_225927172.1;transl_table=11 NZ_AP024168.1 RefSeq gene 75548 78319 . - . ID=gene-VA249_RS23375;Name=prsT;gbkey=Gene;gene=prsT;gene_biotype=protein_coding;locus_tag=VA249_RS23375;old_locus_tag=VYA_44730 NZ_AP024168.1 Protein Homology CDS 75548 78319 . - 0 ID=cds-WP_221072594.1;Parent=gene-VA249_RS23375;Dbxref=Genbank:WP_221072594.1;Name=WP_221072594.1;Ontology_term=GO:0005515;gbkey=CDS;gene=prsT;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:TIGR02917.1;locus_tag=VA249_RS23375;product=PEP-CTERM system TPR-repeat protein PrsT;protein_id=WP_221072594.1;transl_table=11 NZ_AP024168.1 RefSeq gene 78539 79693 . + . ID=gene-VA249_RS23380;Name=VA249_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23380;old_locus_tag=VYA_44740 NZ_AP024168.1 Protein Homology CDS 78539 79693 . + 0 ID=cds-WP_221072605.1;Parent=gene-VA249_RS23380;Dbxref=Genbank:WP_221072605.1;Name=WP_221072605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024871.2;locus_tag=VA249_RS23380;product=GNAT family N-acetyltransferase;protein_id=WP_221072605.1;transl_table=11 NZ_AP024168.1 RefSeq gene 79734 81212 . + . ID=gene-VA249_RS23385;Name=VA249_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23385;old_locus_tag=VYA_44750 NZ_AP024168.1 Protein Homology CDS 79734 81212 . + 0 ID=cds-WP_221072607.1;Parent=gene-VA249_RS23385;Dbxref=Genbank:WP_221072607.1;Name=WP_221072607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=VA249_RS23385;product=oligosaccharide flippase family protein;protein_id=WP_221072607.1;transl_table=11 NZ_AP024168.1 RefSeq gene 81305 83089 . + . ID=gene-VA249_RS23390;Name=VA249_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23390;old_locus_tag=VYA_44760 NZ_AP024168.1 Protein Homology CDS 81305 83089 . + 0 ID=cds-WP_221072609.1;Parent=gene-VA249_RS23390;Dbxref=Genbank:WP_221072609.1;Name=WP_221072609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013607.2;locus_tag=VA249_RS23390;product=ATP-grasp domain-containing protein;protein_id=WP_221072609.1;transl_table=11 NZ_AP024168.1 RefSeq gene 83086 84093 . + . ID=gene-VA249_RS23395;Name=VA249_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23395;old_locus_tag=VYA_44770 NZ_AP024168.1 GeneMarkS-2+ CDS 83086 84093 . + 0 ID=cds-WP_221072611.1;Parent=gene-VA249_RS23395;Dbxref=Genbank:WP_221072611.1;Name=WP_221072611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23395;product=hypothetical protein;protein_id=WP_221072611.1;transl_table=11 NZ_AP024168.1 RefSeq gene 84090 85601 . + . ID=gene-VA249_RS23400;Name=VA249_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23400;old_locus_tag=VYA_44780 NZ_AP024168.1 Protein Homology CDS 84090 85601 . + 0 ID=cds-WP_221072614.1;Parent=gene-VA249_RS23400;Dbxref=Genbank:WP_221072614.1;Name=WP_221072614.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=VA249_RS23400;product=oligosaccharide flippase family protein;protein_id=WP_221072614.1;transl_table=11 NZ_AP024168.1 RefSeq gene 85717 86772 . - . ID=gene-VA249_RS23405;Name=VA249_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23405;old_locus_tag=VYA_44790 NZ_AP024168.1 Protein Homology CDS 85717 86772 . - 0 ID=cds-WP_221072616.1;Parent=gene-VA249_RS23405;Dbxref=Genbank:WP_221072616.1;Name=WP_221072616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=VA249_RS23405;product=glycosyltransferase family 2 protein;protein_id=WP_221072616.1;transl_table=11 NZ_AP024168.1 RefSeq gene 86781 87557 . - . ID=gene-VA249_RS23410;Name=VA249_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23410;old_locus_tag=VYA_44800 NZ_AP024168.1 GeneMarkS-2+ CDS 86781 87557 . - 0 ID=cds-WP_221072618.1;Parent=gene-VA249_RS23410;Dbxref=Genbank:WP_221072618.1;Name=WP_221072618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23410;product=hypothetical protein;protein_id=WP_221072618.1;transl_table=11 NZ_AP024168.1 RefSeq gene 87554 88564 . - . ID=gene-VA249_RS23415;Name=VA249_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23415;old_locus_tag=VYA_44810 NZ_AP024168.1 Protein Homology CDS 87554 88564 . - 0 ID=cds-WP_221072619.1;Parent=gene-VA249_RS23415;Dbxref=Genbank:WP_221072619.1;Name=WP_221072619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=VA249_RS23415;product=glycosyltransferase family 2 protein;protein_id=WP_221072619.1;transl_table=11 NZ_AP024168.1 RefSeq gene 88634 89557 . - . ID=gene-VA249_RS23420;Name=VA249_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23420;old_locus_tag=VYA_44820 NZ_AP024168.1 Protein Homology CDS 88634 89557 . - 0 ID=cds-WP_221072621.1;Parent=gene-VA249_RS23420;Dbxref=Genbank:WP_221072621.1;Name=WP_221072621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016145.2;locus_tag=VA249_RS23420;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_221072621.1;transl_table=11 NZ_AP024168.1 RefSeq gene 89606 90655 . - . ID=gene-VA249_RS23425;Name=VA249_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23425;old_locus_tag=VYA_44830 NZ_AP024168.1 Protein Homology CDS 89606 90655 . - 0 ID=cds-WP_221072624.1;Parent=gene-VA249_RS23425;Dbxref=Genbank:WP_221072624.1;Name=WP_221072624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025082.2;locus_tag=VA249_RS23425;product=glycosyltransferase family 2 protein;protein_id=WP_221072624.1;transl_table=11 NZ_AP024168.1 RefSeq gene 90899 92926 . + . ID=gene-VA249_RS23430;Name=prsK;gbkey=Gene;gene=prsK;gene_biotype=protein_coding;locus_tag=VA249_RS23430 NZ_AP024168.1 Protein Homology CDS 90899 92926 . + 0 ID=cds-WP_221072627.1;Parent=gene-VA249_RS23430;Dbxref=Genbank:WP_221072627.1;Name=WP_221072627.1;Ontology_term=GO:0000155,GO:0004673;gbkey=CDS;gene=prsK;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;inference=COORDINATES: protein motif:HMM:TIGR02916.1;locus_tag=VA249_RS23430;product=PEP-CTERM system histidine kinase PrsK;protein_id=WP_221072627.1;transl_table=11 NZ_AP024168.1 RefSeq gene 93064 94401 . + . ID=gene-VA249_RS23435;Name=prsR;gbkey=Gene;gene=prsR;gene_biotype=protein_coding;locus_tag=VA249_RS23435;old_locus_tag=VYA_44860 NZ_AP024168.1 Protein Homology CDS 93064 94401 . + 0 ID=cds-WP_221072678.1;Parent=gene-VA249_RS23435;Dbxref=Genbank:WP_221072678.1;Name=WP_221072678.1;Ontology_term=GO:0045893,GO:0000156,GO:0003677;gbkey=CDS;gene=prsR;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011576031.1;locus_tag=VA249_RS23435;product=PEP-CTERM-box response regulator transcription factor;protein_id=WP_221072678.1;transl_table=11 NZ_AP024168.1 RefSeq gene 94447 95718 . + . ID=gene-VA249_RS23440;Name=VA249_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23440 NZ_AP024168.1 GeneMarkS-2+ CDS 94447 95718 . + 0 ID=cds-WP_221072629.1;Parent=gene-VA249_RS23440;Dbxref=Genbank:WP_221072629.1;Name=WP_221072629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23440;product=hypothetical protein;protein_id=WP_221072629.1;transl_table=11 NZ_AP024168.1 RefSeq gene 95990 96994 . + . ID=gene-VA249_RS23445;Name=VA249_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23445;old_locus_tag=VYA_44870 NZ_AP024168.1 Protein Homology CDS 95990 96994 . + 0 ID=cds-WP_221072631.1;Parent=gene-VA249_RS23445;Dbxref=Genbank:WP_221072631.1;Name=WP_221072631.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988794.1;locus_tag=VA249_RS23445;product=tyrosine-type recombinase/integrase;protein_id=WP_221072631.1;transl_table=11 NZ_AP024168.1 RefSeq gene 96996 98312 . - . ID=gene-VA249_RS23450;Name=VA249_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23450 NZ_AP024168.1 Protein Homology CDS 96996 98312 . - 0 ID=cds-WP_221072633.1;Parent=gene-VA249_RS23450;Dbxref=Genbank:WP_221072633.1;Name=WP_221072633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03097.1;locus_tag=VA249_RS23450;product=putative O-glycosylation ligase%2C exosortase A system-associated;protein_id=WP_221072633.1;transl_table=11 NZ_AP024168.1 RefSeq gene 98399 99529 . - . ID=gene-VA249_RS23455;Name=VA249_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23455;old_locus_tag=VYA_44880 NZ_AP024168.1 Protein Homology CDS 98399 99529 . - 0 ID=cds-WP_221072635.1;Parent=gene-VA249_RS23455;Dbxref=Genbank:WP_221072635.1;Name=WP_221072635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=VA249_RS23455;product=glycosyltransferase;protein_id=WP_221072635.1;transl_table=11 NZ_AP024168.1 RefSeq gene 99728 100756 . + . ID=gene-VA249_RS23460;Name=VA249_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23460;old_locus_tag=VYA_44890 NZ_AP024168.1 Protein Homology CDS 99728 100756 . + 0 ID=cds-WP_221072636.1;Parent=gene-VA249_RS23460;Dbxref=Genbank:WP_221072636.1;Name=WP_221072636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782161.1;locus_tag=VA249_RS23460;product=GHMP kinase;protein_id=WP_221072636.1;transl_table=11 NZ_AP024168.1 RefSeq gene 100744 101334 . + . ID=gene-VA249_RS23465;Name=VA249_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23465;old_locus_tag=VYA_44900 NZ_AP024168.1 Protein Homology CDS 100744 101334 . + 0 ID=cds-WP_128813629.1;Parent=gene-VA249_RS23465;Dbxref=Genbank:WP_128813629.1;Name=WP_128813629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013136716.1;locus_tag=VA249_RS23465;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_128813629.1;transl_table=11 NZ_AP024168.1 RefSeq pseudogene 101318 102054 . + . ID=gene-VA249_RS23475;Name=VA249_RS23475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS23475;old_locus_tag=VYA_44910;pseudo=true NZ_AP024168.1 Protein Homology CDS 101318 102054 . + 0 ID=cds-VA249_RS23475;Parent=gene-VA249_RS23475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012695.2;locus_tag=VA249_RS23475;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 NZ_AP024168.1 RefSeq gene 102051 102989 . + . ID=gene-VA249_RS23480;Name=VA249_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23480;old_locus_tag=VYA_44920 NZ_AP024168.1 GeneMarkS-2+ CDS 102051 102989 . + 0 ID=cds-WP_221072651.1;Parent=gene-VA249_RS23480;Dbxref=Genbank:WP_221072651.1;Name=WP_221072651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23480;product=hypothetical protein;protein_id=WP_221072651.1;transl_table=11 NZ_AP024168.1 RefSeq gene 103071 104495 . + . ID=gene-VA249_RS23485;Name=VA249_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23485;old_locus_tag=VYA_44930 NZ_AP024168.1 Protein Homology CDS 103071 104495 . + 0 ID=cds-WP_221072653.1;Parent=gene-VA249_RS23485;Dbxref=Genbank:WP_221072653.1;Name=WP_221072653.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: protein motif:HMM:NF006088.0;locus_tag=VA249_RS23485;product=UbiA family prenyltransferase;protein_id=WP_221072653.1;transl_table=11 NZ_AP024168.1 RefSeq gene 104492 104860 . + . ID=gene-VA249_RS23490;Name=VA249_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23490;old_locus_tag=VYA_44940 NZ_AP024168.1 Protein Homology CDS 104492 104860 . + 0 ID=cds-WP_128813625.1;Parent=gene-VA249_RS23490;Dbxref=Genbank:WP_128813625.1;Name=WP_128813625.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014706626.1;locus_tag=VA249_RS23490;product=EamA family transporter;protein_id=WP_128813625.1;transl_table=11 NZ_AP024168.1 RefSeq gene 104872 106332 . + . ID=gene-VA249_RS23495;Name=VA249_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23495 NZ_AP024168.1 GeneMarkS-2+ CDS 104872 106332 . + 0 ID=cds-WP_221072655.1;Parent=gene-VA249_RS23495;Dbxref=Genbank:WP_221072655.1;Name=WP_221072655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23495;product=hypothetical protein;protein_id=WP_221072655.1;transl_table=11 NZ_AP024168.1 RefSeq gene 106500 107114 . + . ID=gene-VA249_RS23500;Name=VA249_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23500;old_locus_tag=VYA_44970 NZ_AP024168.1 GeneMarkS-2+ CDS 106500 107114 . + 0 ID=cds-WP_221072658.1;Parent=gene-VA249_RS23500;Dbxref=Genbank:WP_221072658.1;Name=WP_221072658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23500;product=hypothetical protein;protein_id=WP_221072658.1;transl_table=11 NZ_AP024168.1 RefSeq gene 107157 108488 . - . ID=gene-VA249_RS23505;Name=VA249_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23505;old_locus_tag=VYA_44980 NZ_AP024168.1 GeneMarkS-2+ CDS 107157 108488 . - 0 ID=cds-WP_221072660.1;Parent=gene-VA249_RS23505;Dbxref=Genbank:WP_221072660.1;Name=WP_221072660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23505;product=hypothetical protein;protein_id=WP_221072660.1;transl_table=11 NZ_AP024168.1 RefSeq gene 108544 109974 . - . ID=gene-VA249_RS23510;Name=VA249_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23510;old_locus_tag=VYA_44990 NZ_AP024168.1 GeneMarkS-2+ CDS 108544 109974 . - 0 ID=cds-WP_221072662.1;Parent=gene-VA249_RS23510;Dbxref=Genbank:WP_221072662.1;Name=WP_221072662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23510;product=hypothetical protein;protein_id=WP_221072662.1;transl_table=11 NZ_AP024168.1 RefSeq gene 109967 110782 . - . ID=gene-VA249_RS23515;Name=VA249_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23515;old_locus_tag=VYA_45000 NZ_AP024168.1 Protein Homology CDS 109967 110782 . - 0 ID=cds-WP_221072664.1;Parent=gene-VA249_RS23515;Dbxref=Genbank:WP_221072664.1;Name=WP_221072664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011045746.1;locus_tag=VA249_RS23515;product=XrtA-associated tyrosine autokinase;protein_id=WP_221072664.1;transl_table=11 NZ_AP024168.1 RefSeq gene 110799 112364 . - . ID=gene-VA249_RS23520;Name=VA249_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23520;old_locus_tag=VYA_45010 NZ_AP024168.1 Protein Homology CDS 110799 112364 . - 0 ID=cds-WP_221072362.1;Parent=gene-VA249_RS23520;Dbxref=Genbank:WP_221072362.1;Name=WP_221072362.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03007.1;locus_tag=VA249_RS23520;product=hypothetical protein;protein_id=WP_221072362.1;transl_table=11 NZ_AP024168.1 RefSeq gene 112382 113032 . - . ID=gene-VA249_RS23525;Name=VA249_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23525;old_locus_tag=VYA_45020 NZ_AP024168.1 Protein Homology CDS 112382 113032 . - 0 ID=cds-WP_221072364.1;Parent=gene-VA249_RS23525;Dbxref=Genbank:WP_221072364.1;Name=WP_221072364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007618463.1;locus_tag=VA249_RS23525;product=polysaccharide export protein;protein_id=WP_221072364.1;transl_table=11 NZ_AP024168.1 RefSeq gene 113770 115170 . + . ID=gene-VA249_RS23530;Name=VA249_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23530;old_locus_tag=VYA_45030 NZ_AP024168.1 Protein Homology CDS 113770 115170 . + 0 ID=cds-WP_221072366.1;Parent=gene-VA249_RS23530;Dbxref=Genbank:WP_221072366.1;Name=WP_221072366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016404019.1;locus_tag=VA249_RS23530;product=TIGR03013 family PEP-CTERM/XrtA system glycosyltransferase;protein_id=WP_221072366.1;transl_table=11 NZ_AP024168.1 RefSeq gene 115175 116113 . + . ID=gene-VA249_RS23535;Name=VA249_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23535;old_locus_tag=VYA_45040 NZ_AP024168.1 Protein Homology CDS 115175 116113 . + 0 ID=cds-WP_221072368.1;Parent=gene-VA249_RS23535;Dbxref=Genbank:WP_221072368.1;Name=WP_221072368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006991432.1;locus_tag=VA249_RS23535;product=DUF3473 domain-containing protein;protein_id=WP_221072368.1;transl_table=11 NZ_AP024168.1 RefSeq gene 116043 117086 . + . ID=gene-VA249_RS23540;Name=VA249_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23540;old_locus_tag=VYA_45050 NZ_AP024168.1 Protein Homology CDS 116043 117086 . + 0 ID=cds-WP_221072370.1;Parent=gene-VA249_RS23540;Dbxref=Genbank:WP_221072370.1;Name=WP_221072370.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008843138.1;locus_tag=VA249_RS23540;product=FemAB family PEP-CTERM system-associated protein;protein_id=WP_221072370.1;transl_table=11 NZ_AP024168.1 RefSeq gene 117090 118307 . + . ID=gene-VA249_RS23545;Name=VA249_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23545;old_locus_tag=VYA_45060 NZ_AP024168.1 Protein Homology CDS 117090 118307 . + 0 ID=cds-WP_221072371.1;Parent=gene-VA249_RS23545;Dbxref=Genbank:WP_221072371.1;Name=WP_221072371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03087.1;locus_tag=VA249_RS23545;product=TIGR03087 family PEP-CTERM/XrtA system glycosyltransferase;protein_id=WP_221072371.1;transl_table=11 NZ_AP024168.1 RefSeq gene 118312 119736 . + . ID=gene-VA249_RS23550;Name=xrtA;gbkey=Gene;gene=xrtA;gene_biotype=protein_coding;locus_tag=VA249_RS23550;old_locus_tag=VYA_45070 NZ_AP024168.1 Protein Homology CDS 118312 119736 . + 0 ID=cds-WP_221072373.1;Parent=gene-VA249_RS23550;Dbxref=Genbank:WP_221072373.1;Name=WP_221072373.1;Ontology_term=GO:0043687,GO:0004197;gbkey=CDS;gene=xrtA;go_function=cysteine-type endopeptidase activity|0004197||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: protein motif:HMM:TIGR03109.1;locus_tag=VA249_RS23550;product=exosortase A;protein_id=WP_221072373.1;transl_table=11 NZ_AP024168.1 RefSeq gene 119751 121631 . + . ID=gene-VA249_RS23555;Name=VA249_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23555;old_locus_tag=VYA_45080 NZ_AP024168.1 Protein Homology CDS 119751 121631 . + 0 ID=cds-WP_221072375.1;Parent=gene-VA249_RS23555;Dbxref=Genbank:WP_221072375.1;Name=WP_221072375.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018993304.1;locus_tag=VA249_RS23555;product=amidotransferase 1%2C exosortase A system-associated;protein_id=WP_221072375.1;transl_table=11 NZ_AP024168.1 RefSeq gene 121637 122866 . + . ID=gene-VA249_RS23560;Name=VA249_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23560;old_locus_tag=VYA_45090 NZ_AP024168.1 Protein Homology CDS 121637 122866 . + 0 ID=cds-WP_221072378.1;Parent=gene-VA249_RS23560;Dbxref=Genbank:WP_221072378.1;Name=WP_221072378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007618477.1;locus_tag=VA249_RS23560;product=glycosyltransferase family 4 protein;protein_id=WP_221072378.1;transl_table=11 NZ_AP024168.1 RefSeq gene 122890 124059 . + . ID=gene-VA249_RS23565;Name=VA249_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23565;old_locus_tag=VYA_45100 NZ_AP024168.1 Protein Homology CDS 122890 124059 . + 0 ID=cds-WP_221072379.1;Parent=gene-VA249_RS23565;Dbxref=Genbank:WP_221072379.1;Name=WP_221072379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=VA249_RS23565;product=glycosyltransferase family 4 protein;protein_id=WP_221072379.1;transl_table=11 NZ_AP024168.1 RefSeq gene 124075 125172 . + . ID=gene-VA249_RS23570;Name=VA249_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23570;old_locus_tag=VYA_45110 NZ_AP024168.1 Protein Homology CDS 124075 125172 . + 0 ID=cds-WP_221072380.1;Parent=gene-VA249_RS23570;Dbxref=Genbank:WP_221072380.1;Name=WP_221072380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=VA249_RS23570;product=glycosyltransferase family 4 protein;protein_id=WP_221072380.1;transl_table=11 NZ_AP024168.1 RefSeq gene 125185 126054 . + . ID=gene-VA249_RS23575;Name=VA249_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23575;old_locus_tag=VYA_45120 NZ_AP024168.1 Protein Homology CDS 125185 126054 . + 0 ID=cds-WP_221072381.1;Parent=gene-VA249_RS23575;Dbxref=Genbank:WP_221072381.1;Name=WP_221072381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=VA249_RS23575;product=glycosyltransferase family 2 protein;protein_id=WP_221072381.1;transl_table=11 NZ_AP024168.1 RefSeq gene 126089 127102 . + . ID=gene-VA249_RS23580;Name=VA249_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23580;old_locus_tag=VYA_45130 NZ_AP024168.1 Protein Homology CDS 126089 127102 . + 0 ID=cds-WP_221072382.1;Parent=gene-VA249_RS23580;Dbxref=Genbank:WP_221072382.1;Name=WP_221072382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=VA249_RS23580;product=glycosyltransferase;protein_id=WP_221072382.1;transl_table=11 NZ_AP024168.1 RefSeq gene 127228 127842 . + . ID=gene-VA249_RS23585;Name=VA249_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23585;old_locus_tag=VYA_45140 NZ_AP024168.1 Protein Homology CDS 127228 127842 . + 0 ID=cds-WP_221072383.1;Parent=gene-VA249_RS23585;Dbxref=Genbank:WP_221072383.1;Name=WP_221072383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017791282.1;locus_tag=VA249_RS23585;product=3'-5' exonuclease;protein_id=WP_221072383.1;transl_table=11 NZ_AP024168.1 RefSeq gene 127869 128951 . - . ID=gene-VA249_RS23590;Name=VA249_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23590;old_locus_tag=VYA_45150 NZ_AP024168.1 Protein Homology CDS 127869 128951 . - 0 ID=cds-WP_221072384.1;Parent=gene-VA249_RS23590;Dbxref=Genbank:WP_221072384.1;Name=WP_221072384.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: protein motif:HMM:NF016357.2;locus_tag=VA249_RS23590;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_221072384.1;transl_table=11 NZ_AP024168.1 RefSeq gene 129142 129921 . - . ID=gene-VA249_RS23595;Name=VA249_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23595;old_locus_tag=VYA_45160 NZ_AP024168.1 Protein Homology CDS 129142 129921 . - 0 ID=cds-WP_221072385.1;Parent=gene-VA249_RS23595;Dbxref=Genbank:WP_221072385.1;Name=WP_221072385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016857361.1;locus_tag=VA249_RS23595;product=phosphocholine cytidylyltransferase family protein;protein_id=WP_221072385.1;transl_table=11 NZ_AP024168.1 RefSeq gene 129918 130547 . - . ID=gene-VA249_RS23600;Name=VA249_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23600;old_locus_tag=VYA_45170 NZ_AP024168.1 Protein Homology CDS 129918 130547 . - 0 ID=cds-WP_221072386.1;Parent=gene-VA249_RS23600;Dbxref=Genbank:WP_221072386.1;Name=WP_221072386.1;Note=Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF019342.2;locus_tag=VA249_RS23600;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_221072386.1;transl_table=11 NZ_AP024168.1 RefSeq gene 130544 133444 . - . ID=gene-VA249_RS23605;Name=VA249_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23605;old_locus_tag=VYA_45180 NZ_AP024168.1 Protein Homology CDS 130544 133444 . - 0 ID=cds-WP_225927160.1;Parent=gene-VA249_RS23605;Dbxref=Genbank:WP_225927160.1;Name=WP_225927160.1;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012154656.1;locus_tag=VA249_RS23605;product=PEP-utilizing enzyme;protein_id=WP_225927160.1;transl_table=11 NZ_AP024168.1 RefSeq gene 134001 134909 . + . ID=gene-VA249_RS23610;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=VA249_RS23610;old_locus_tag=VYA_45190 NZ_AP024168.1 Protein Homology CDS 134001 134909 . + 0 ID=cds-WP_221072389.1;Parent=gene-VA249_RS23610;Dbxref=Genbank:WP_221072389.1;Name=WP_221072389.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004738750.1;locus_tag=VA249_RS23610;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_221072389.1;transl_table=11 NZ_AP024168.1 RefSeq gene 134955 136406 . + . ID=gene-VA249_RS23615;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=VA249_RS23615;old_locus_tag=VYA_45200 NZ_AP024168.1 Protein Homology CDS 134955 136406 . + 0 ID=cds-WP_221072391.1;Parent=gene-VA249_RS23615;Dbxref=Genbank:WP_221072391.1;Name=WP_221072391.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528550.1;locus_tag=VA249_RS23615;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_221072391.1;transl_table=11 NZ_AP024168.1 RefSeq gene 136471 138195 . + . ID=gene-VA249_RS23620;Name=VA249_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23620;old_locus_tag=VYA_45210 NZ_AP024168.1 Protein Homology CDS 136471 138195 . + 0 ID=cds-WP_221072393.1;Parent=gene-VA249_RS23620;Dbxref=Genbank:WP_221072393.1;Name=WP_221072393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410374.1;locus_tag=VA249_RS23620;product=SLC13 family permease;protein_id=WP_221072393.1;transl_table=11 NZ_AP024168.1 RefSeq gene 138325 139452 . - . ID=gene-VA249_RS23625;Name=VA249_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23625;old_locus_tag=VYA_45220 NZ_AP024168.1 Protein Homology CDS 138325 139452 . - 0 ID=cds-WP_221072395.1;Parent=gene-VA249_RS23625;Dbxref=Genbank:WP_221072395.1;Name=WP_221072395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008020991.1;locus_tag=VA249_RS23625;product=acyl-CoA dehydrogenase family protein;protein_id=WP_221072395.1;transl_table=11 NZ_AP024168.1 RefSeq gene 139465 140673 . - . ID=gene-VA249_RS23630;Name=VA249_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23630;old_locus_tag=VYA_45230 NZ_AP024168.1 Protein Homology CDS 139465 140673 . - 0 ID=cds-WP_221072397.1;Parent=gene-VA249_RS23630;Dbxref=Genbank:WP_221072397.1;Name=WP_221072397.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008844340.1;locus_tag=VA249_RS23630;product=acyl-CoA dehydrogenase family protein;protein_id=WP_221072397.1;transl_table=11 NZ_AP024168.1 RefSeq gene 140690 141856 . - . ID=gene-VA249_RS23635;Name=VA249_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23635;old_locus_tag=VYA_45240 NZ_AP024168.1 Protein Homology CDS 140690 141856 . - 0 ID=cds-WP_221072399.1;Parent=gene-VA249_RS23635;Dbxref=Genbank:WP_221072399.1;Name=WP_221072399.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256669.1;locus_tag=VA249_RS23635;product=acyl-CoA dehydrogenase family protein;protein_id=WP_221072399.1;transl_table=11 NZ_AP024168.1 RefSeq gene 141865 143040 . - . ID=gene-VA249_RS23640;Name=VA249_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23640;old_locus_tag=VYA_45250 NZ_AP024168.1 Protein Homology CDS 141865 143040 . - 0 ID=cds-WP_221072401.1;Parent=gene-VA249_RS23640;Dbxref=Genbank:WP_221072401.1;Name=WP_221072401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011327580.1;locus_tag=VA249_RS23640;product=lipid-transfer protein;protein_id=WP_221072401.1;transl_table=11 NZ_AP024168.1 RefSeq gene 143052 143474 . - . ID=gene-VA249_RS23645;Name=VA249_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23645;old_locus_tag=VYA_45260 NZ_AP024168.1 Protein Homology CDS 143052 143474 . - 0 ID=cds-WP_128813593.1;Parent=gene-VA249_RS23645;Dbxref=Genbank:WP_128813593.1;Name=WP_128813593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925295.1;locus_tag=VA249_RS23645;product=MaoC family dehydratase;protein_id=WP_128813593.1;transl_table=11 NZ_AP024168.1 RefSeq gene 143455 144564 . - . ID=gene-VA249_RS23650;Name=VA249_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23650;old_locus_tag=VYA_45270 NZ_AP024168.1 Protein Homology CDS 143455 144564 . - 0 ID=cds-WP_221072404.1;Parent=gene-VA249_RS23650;Dbxref=Genbank:WP_221072404.1;Name=WP_221072404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008062503.1;locus_tag=VA249_RS23650;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WP_221072404.1;transl_table=11 NZ_AP024168.1 RefSeq gene 144564 145535 . - . ID=gene-VA249_RS23655;Name=VA249_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23655;old_locus_tag=VYA_45280 NZ_AP024168.1 Protein Homology CDS 144564 145535 . - 0 ID=cds-WP_221072405.1;Parent=gene-VA249_RS23655;Dbxref=Genbank:WP_221072405.1;Name=WP_221072405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007946123.1;locus_tag=VA249_RS23655;product=OB-fold domain-containing protein;protein_id=WP_221072405.1;transl_table=11 NZ_AP024168.1 RefSeq gene 145575 146339 . - . ID=gene-VA249_RS23660;Name=VA249_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23660;old_locus_tag=VYA_45290 NZ_AP024168.1 Protein Homology CDS 145575 146339 . - 0 ID=cds-WP_221072407.1;Parent=gene-VA249_RS23660;Dbxref=Genbank:WP_221072407.1;Name=WP_221072407.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277198.1;locus_tag=VA249_RS23660;product=SDR family oxidoreductase;protein_id=WP_221072407.1;transl_table=11 NZ_AP024168.1 RefSeq gene 146485 147261 . + . ID=gene-VA249_RS23665;Name=VA249_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23665;old_locus_tag=VYA_45300 NZ_AP024168.1 Protein Homology CDS 146485 147261 . + 0 ID=cds-WP_221072408.1;Parent=gene-VA249_RS23665;Dbxref=Genbank:WP_221072408.1;Name=WP_221072408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008844333.1;locus_tag=VA249_RS23665;product=enoyl-CoA hydratase;protein_id=WP_221072408.1;transl_table=11 NZ_AP024168.1 RefSeq gene 147432 148604 . - . ID=gene-VA249_RS23670;Name=VA249_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23670;old_locus_tag=VYA_45310 NZ_AP024168.1 Protein Homology CDS 147432 148604 . - 0 ID=cds-WP_210205370.1;Parent=gene-VA249_RS23670;Dbxref=Genbank:WP_210205370.1;Name=WP_210205370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011327574.1;locus_tag=VA249_RS23670;product=helix-turn-helix transcriptional regulator;protein_id=WP_210205370.1;transl_table=11 NZ_AP024168.1 RefSeq gene 148671 149630 . - . ID=gene-VA249_RS23675;Name=VA249_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23675;old_locus_tag=VYA_45320 NZ_AP024168.1 Protein Homology CDS 148671 149630 . - 0 ID=cds-WP_221072411.1;Parent=gene-VA249_RS23675;Dbxref=Genbank:WP_221072411.1;Name=WP_221072411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257046.1;locus_tag=VA249_RS23675;product=FAD-binding protein;protein_id=WP_221072411.1;transl_table=11 NZ_AP024168.1 RefSeq gene 149640 150389 . - . ID=gene-VA249_RS23680;Name=VA249_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23680;old_locus_tag=VYA_45330 NZ_AP024168.1 Protein Homology CDS 149640 150389 . - 0 ID=cds-WP_221072413.1;Parent=gene-VA249_RS23680;Dbxref=Genbank:WP_221072413.1;Name=WP_221072413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277194.1;locus_tag=VA249_RS23680;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_221072413.1;transl_table=11 NZ_AP024168.1 RefSeq gene 150568 151314 . - . ID=gene-VA249_RS23685;Name=VA249_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23685;old_locus_tag=VYA_45340 NZ_AP024168.1 GeneMarkS-2+ CDS 150568 151314 . - 0 ID=cds-WP_221072415.1;Parent=gene-VA249_RS23685;Dbxref=Genbank:WP_221072415.1;Name=WP_221072415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23685;product=hypothetical protein;protein_id=WP_221072415.1;transl_table=11 NZ_AP024168.1 RefSeq gene 151529 152008 . - . ID=gene-VA249_RS23690;Name=VA249_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23690;old_locus_tag=VYA_45350 NZ_AP024168.1 Protein Homology CDS 151529 152008 . - 0 ID=cds-WP_221072417.1;Parent=gene-VA249_RS23690;Dbxref=Genbank:WP_221072417.1;Name=WP_221072417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733823.1;locus_tag=VA249_RS23690;product=AAA family ATPase;protein_id=WP_221072417.1;transl_table=11 NZ_AP024168.1 RefSeq gene 152079 153272 . - . ID=gene-VA249_RS23695;Name=VA249_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23695;old_locus_tag=VYA_45360 NZ_AP024168.1 Protein Homology CDS 152079 153272 . - 0 ID=cds-WP_221072419.1;Parent=gene-VA249_RS23695;Dbxref=Genbank:WP_221072419.1;Name=WP_221072419.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009832954.1;locus_tag=VA249_RS23695;product=MFS transporter;protein_id=WP_221072419.1;transl_table=11 NZ_AP024168.1 RefSeq gene 153381 154304 . + . ID=gene-VA249_RS23700;Name=VA249_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23700;old_locus_tag=VYA_45370 NZ_AP024168.1 Protein Homology CDS 153381 154304 . + 0 ID=cds-WP_221072421.1;Parent=gene-VA249_RS23700;Dbxref=Genbank:WP_221072421.1;Name=WP_221072421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012068888.1;locus_tag=VA249_RS23700;product=helix-turn-helix domain-containing protein;protein_id=WP_221072421.1;transl_table=11 NZ_AP024168.1 RefSeq gene 154323 155351 . - . ID=gene-VA249_RS23705;Name=VA249_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23705;old_locus_tag=VYA_45380 NZ_AP024168.1 Protein Homology CDS 154323 155351 . - 0 ID=cds-WP_221072423.1;Parent=gene-VA249_RS23705;Dbxref=Genbank:WP_221072423.1;Name=WP_221072423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324650.1;locus_tag=VA249_RS23705;product=ferredoxin--NADP reductase;protein_id=WP_221072423.1;transl_table=11 NZ_AP024168.1 RefSeq gene 155379 156599 . - . ID=gene-VA249_RS23710;Name=VA249_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23710;old_locus_tag=VYA_45390 NZ_AP024168.1 Protein Homology CDS 155379 156599 . - 0 ID=cds-WP_221072425.1;Parent=gene-VA249_RS23710;Dbxref=Genbank:WP_221072425.1;Name=WP_221072425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012155365.1;locus_tag=VA249_RS23710;product=hypothetical protein;protein_id=WP_221072425.1;transl_table=11 NZ_AP024168.1 RefSeq gene 156844 157890 . - . ID=gene-VA249_RS23715;Name=VA249_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23715;old_locus_tag=VYA_45400 NZ_AP024168.1 Protein Homology CDS 156844 157890 . - 0 ID=cds-WP_225927161.1;Parent=gene-VA249_RS23715;Dbxref=Genbank:WP_225927161.1;Name=WP_225927161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600212.1;locus_tag=VA249_RS23715;product=alpha/beta hydrolase;protein_id=WP_225927161.1;transl_table=11 NZ_AP024168.1 RefSeq gene 158219 159013 . - . ID=gene-VA249_RS23720;Name=VA249_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23720;old_locus_tag=VYA_45410 NZ_AP024168.1 Protein Homology CDS 158219 159013 . - 0 ID=cds-WP_221072427.1;Parent=gene-VA249_RS23720;Dbxref=Genbank:WP_221072427.1;Name=WP_221072427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017085380.1;locus_tag=VA249_RS23720;product=hypothetical protein;protein_id=WP_221072427.1;transl_table=11 NZ_AP024168.1 RefSeq gene 159142 160596 . - . ID=gene-VA249_RS23725;Name=VA249_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23725;old_locus_tag=VYA_45420 NZ_AP024168.1 Protein Homology CDS 159142 160596 . - 0 ID=cds-WP_221072428.1;Parent=gene-VA249_RS23725;Dbxref=Genbank:WP_221072428.1;Name=WP_221072428.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018561.2;locus_tag=VA249_RS23725;product=DUF1214 domain-containing protein;protein_id=WP_221072428.1;transl_table=11 NZ_AP024168.1 RefSeq gene 160669 160974 . - . ID=gene-VA249_RS23730;Name=VA249_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23730;old_locus_tag=VYA_45430 NZ_AP024168.1 Protein Homology CDS 160669 160974 . - 0 ID=cds-WP_225927162.1;Parent=gene-VA249_RS23730;Dbxref=Genbank:WP_225927162.1;Name=WP_225927162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600224.1;locus_tag=VA249_RS23730;product=hypothetical protein;protein_id=WP_225927162.1;transl_table=11 NZ_AP024168.1 RefSeq gene 161184 162971 . + . ID=gene-VA249_RS23735;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=VA249_RS23735;old_locus_tag=VYA_45440 NZ_AP024168.1 Protein Homology CDS 161184 162971 . + 0 ID=cds-WP_221072432.1;Parent=gene-VA249_RS23735;Dbxref=Genbank:WP_221072432.1;Name=WP_221072432.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017108001.1;locus_tag=VA249_RS23735;product=protein translocase subunit SecD;protein_id=WP_221072432.1;transl_table=11 NZ_AP024168.1 RefSeq gene 162971 163873 . + . ID=gene-VA249_RS23740;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=VA249_RS23740;old_locus_tag=VYA_45450 NZ_AP024168.1 Protein Homology CDS 162971 163873 . + 0 ID=cds-WP_104029171.1;Parent=gene-VA249_RS23740;Dbxref=Genbank:WP_104029171.1;Name=WP_104029171.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600222.1;locus_tag=VA249_RS23740;product=protein translocase subunit SecF;protein_id=WP_104029171.1;transl_table=11 NZ_AP024168.1 RefSeq gene 164140 165231 . + . ID=gene-VA249_RS23745;Name=VA249_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23745;old_locus_tag=VYA_45460 NZ_AP024168.1 Protein Homology CDS 164140 165231 . + 0 ID=cds-WP_221072434.1;Parent=gene-VA249_RS23745;Dbxref=Genbank:WP_221072434.1;Name=WP_221072434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017041954.1;locus_tag=VA249_RS23745;product=calcium:proton antiporter;protein_id=WP_221072434.1;transl_table=11 NZ_AP024168.1 RefSeq gene 165289 165945 . + . ID=gene-VA249_RS23750;Name=VA249_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23750;old_locus_tag=VYA_45470 NZ_AP024168.1 Protein Homology CDS 165289 165945 . + 0 ID=cds-WP_221072436.1;Parent=gene-VA249_RS23750;Dbxref=Genbank:WP_221072436.1;Name=WP_221072436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600220.1;locus_tag=VA249_RS23750;product=DedA family protein;protein_id=WP_221072436.1;transl_table=11 NZ_AP024168.1 RefSeq gene 165990 167381 . + . ID=gene-VA249_RS23755;Name=VA249_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23755;old_locus_tag=VYA_45480 NZ_AP024168.1 Protein Homology CDS 165990 167381 . + 0 ID=cds-WP_221072437.1;Parent=gene-VA249_RS23755;Dbxref=Genbank:WP_221072437.1;Name=WP_221072437.1;Ontology_term=GO:0006812,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600218.1;locus_tag=VA249_RS23755;product=magnesium transporter;protein_id=WP_221072437.1;transl_table=11 NZ_AP024168.1 RefSeq gene 167418 168068 . + . ID=gene-VA249_RS23760;Name=VA249_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23760;old_locus_tag=VYA_45490 NZ_AP024168.1 Protein Homology CDS 167418 168068 . + 0 ID=cds-WP_221072439.1;Parent=gene-VA249_RS23760;Dbxref=Genbank:WP_221072439.1;Name=WP_221072439.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017091757.1;locus_tag=VA249_RS23760;product=MarC family NAAT transporter;protein_id=WP_221072439.1;transl_table=11 NZ_AP024168.1 RefSeq gene 168451 169377 . + . ID=gene-VA249_RS23765;Name=VA249_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23765;old_locus_tag=VYA_45500 NZ_AP024168.1 Protein Homology CDS 168451 169377 . + 0 ID=cds-WP_221072441.1;Parent=gene-VA249_RS23765;Dbxref=Genbank:WP_221072441.1;Name=WP_221072441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600214.1;locus_tag=VA249_RS23765;product=LysR family transcriptional regulator;protein_id=WP_221072441.1;transl_table=11 NZ_AP024168.1 RefSeq gene 169481 171151 . - . ID=gene-VA249_RS23770;Name=VA249_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23770;old_locus_tag=VYA_45510 NZ_AP024168.1 Protein Homology CDS 169481 171151 . - 0 ID=cds-WP_225927163.1;Parent=gene-VA249_RS23770;Dbxref=Genbank:WP_225927163.1;Name=WP_225927163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017091761.1;locus_tag=VA249_RS23770;product=mechanosensitive ion channel;protein_id=WP_225927163.1;transl_table=11 NZ_AP024168.1 RefSeq gene 171490 172533 . - . ID=gene-VA249_RS23775;Name=VA249_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23775;old_locus_tag=VYA_45520 NZ_AP024168.1 Protein Homology CDS 171490 172533 . - 0 ID=cds-WP_221072444.1;Parent=gene-VA249_RS23775;Dbxref=Genbank:WP_221072444.1;Name=WP_221072444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012600212.1;locus_tag=VA249_RS23775;product=alpha/beta hydrolase;protein_id=WP_221072444.1;transl_table=11 NZ_AP024168.1 RefSeq gene 173139 174140 . - . ID=gene-VA249_RS23780;Name=VA249_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23780;old_locus_tag=VYA_45530 NZ_AP024168.1 GeneMarkS-2+ CDS 173139 174140 . - 0 ID=cds-WP_221072446.1;Parent=gene-VA249_RS23780;Dbxref=Genbank:WP_221072446.1;Name=WP_221072446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23780;product=hypothetical protein;protein_id=WP_221072446.1;transl_table=11 NZ_AP024168.1 RefSeq gene 174152 175213 . - . ID=gene-VA249_RS23785;Name=VA249_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23785;old_locus_tag=VYA_45540 NZ_AP024168.1 Protein Homology CDS 174152 175213 . - 0 ID=cds-WP_221072448.1;Parent=gene-VA249_RS23785;Dbxref=Genbank:WP_221072448.1;Name=WP_221072448.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027890.2;locus_tag=VA249_RS23785;product=HlyD family secretion protein;protein_id=WP_221072448.1;transl_table=11 NZ_AP024168.1 RefSeq gene 175283 176407 . - . ID=gene-VA249_RS23790;Name=VA249_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23790;old_locus_tag=VYA_45550 NZ_AP024168.1 Protein Homology CDS 175283 176407 . - 0 ID=cds-WP_221072450.1;Parent=gene-VA249_RS23790;Dbxref=Genbank:WP_221072450.1;Name=WP_221072450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011081628.1;locus_tag=VA249_RS23790;product=AI-2E family transporter;protein_id=WP_221072450.1;transl_table=11 NZ_AP024168.1 RefSeq gene 176683 177699 . + . ID=gene-VA249_RS23795;Name=VA249_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23795;old_locus_tag=VYA_45560 NZ_AP024168.1 Protein Homology CDS 176683 177699 . + 0 ID=cds-WP_221072452.1;Parent=gene-VA249_RS23795;Dbxref=Genbank:WP_221072452.1;Name=WP_221072452.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024039.2;locus_tag=VA249_RS23795;product=helix-turn-helix transcriptional regulator;protein_id=WP_221072452.1;transl_table=11 NZ_AP024168.1 RefSeq gene 177949 178281 . + . ID=gene-VA249_RS23800;Name=VA249_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23800;old_locus_tag=VYA_45570 NZ_AP024168.1 Protein Homology CDS 177949 178281 . + 0 ID=cds-WP_221072454.1;Parent=gene-VA249_RS23800;Dbxref=Genbank:WP_221072454.1;Name=WP_221072454.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004733856.1;locus_tag=VA249_RS23800;product=SEC-C metal-binding domain-containing protein;protein_id=WP_221072454.1;transl_table=11 NZ_AP024168.1 RefSeq gene 178344 178613 . - . ID=gene-VA249_RS23805;Name=VA249_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23805;old_locus_tag=VYA_45580 NZ_AP024168.1 Protein Homology CDS 178344 178613 . - 0 ID=cds-WP_221072682.1;Parent=gene-VA249_RS23805;Dbxref=Genbank:WP_221072682.1;Name=WP_221072682.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005464459.1;locus_tag=VA249_RS23805;product=Txe/YoeB family addiction module toxin;protein_id=WP_221072682.1;transl_table=11 NZ_AP024168.1 RefSeq gene 178606 178860 . - . ID=gene-VA249_RS23810;Name=VA249_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23810;old_locus_tag=VYA_45590 NZ_AP024168.1 Protein Homology CDS 178606 178860 . - 0 ID=cds-WP_221072456.1;Parent=gene-VA249_RS23810;Dbxref=Genbank:WP_221072456.1;Name=WP_221072456.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371061.1;locus_tag=VA249_RS23810;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_221072456.1;transl_table=11 NZ_AP024168.1 RefSeq gene 179004 180593 . - . ID=gene-VA249_RS23815;Name=VA249_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23815;old_locus_tag=VYA_45600 NZ_AP024168.1 Protein Homology CDS 179004 180593 . - 0 ID=cds-WP_221072458.1;Parent=gene-VA249_RS23815;Dbxref=Genbank:WP_221072458.1;Name=WP_221072458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003057430.1;locus_tag=VA249_RS23815;product=amidase;protein_id=WP_221072458.1;transl_table=11 NZ_AP024168.1 RefSeq gene 180595 181473 . - . ID=gene-VA249_RS23820;Name=VA249_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23820;old_locus_tag=VYA_45610 NZ_AP024168.1 Protein Homology CDS 180595 181473 . - 0 ID=cds-WP_221072460.1;Parent=gene-VA249_RS23820;Dbxref=Genbank:WP_221072460.1;Name=WP_221072460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016780483.1;locus_tag=VA249_RS23820;product=SDR family oxidoreductase;protein_id=WP_221072460.1;transl_table=11 NZ_AP024168.1 RefSeq gene 181530 182681 . - . ID=gene-VA249_RS23825;Name=VA249_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23825;old_locus_tag=VYA_45620 NZ_AP024168.1 Protein Homology CDS 181530 182681 . - 0 ID=cds-WP_221072462.1;Parent=gene-VA249_RS23825;Dbxref=Genbank:WP_221072462.1;Name=WP_221072462.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008056564.1;locus_tag=VA249_RS23825;product=acetyl-CoA C-acetyltransferase;protein_id=WP_221072462.1;transl_table=11 NZ_AP024168.1 RefSeq gene 182681 183751 . - . ID=gene-VA249_RS23830;Name=VA249_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23830;old_locus_tag=VYA_45630 NZ_AP024168.1 Protein Homology CDS 182681 183751 . - 0 ID=cds-WP_221072464.1;Parent=gene-VA249_RS23830;Dbxref=Genbank:WP_221072464.1;Name=WP_221072464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008568681.1;locus_tag=VA249_RS23830;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WP_221072464.1;transl_table=11 NZ_AP024168.1 RefSeq gene 183760 184911 . - . ID=gene-VA249_RS23835;Name=VA249_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23835;old_locus_tag=VYA_45640 NZ_AP024168.1 Protein Homology CDS 183760 184911 . - 0 ID=cds-WP_221072465.1;Parent=gene-VA249_RS23835;Dbxref=Genbank:WP_221072465.1;Name=WP_221072465.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324691.1;locus_tag=VA249_RS23835;product=acyl-CoA dehydrogenase family protein;protein_id=WP_221072465.1;transl_table=11 NZ_AP024168.1 RefSeq gene 184930 185703 . - . ID=gene-VA249_RS23840;Name=VA249_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23840;old_locus_tag=VYA_45650 NZ_AP024168.1 Protein Homology CDS 184930 185703 . - 0 ID=cds-WP_221072466.1;Parent=gene-VA249_RS23840;Dbxref=Genbank:WP_221072466.1;Name=WP_221072466.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002925183.1;locus_tag=VA249_RS23840;product=enoyl-CoA hydratase family protein;protein_id=WP_221072466.1;transl_table=11 NZ_AP024168.1 RefSeq gene 185704 186798 . - . ID=gene-VA249_RS23845;Name=VA249_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23845;old_locus_tag=VYA_45660 NZ_AP024168.1 Protein Homology CDS 185704 186798 . - 0 ID=cds-WP_128813569.1;Parent=gene-VA249_RS23845;Dbxref=Genbank:WP_128813569.1;Name=WP_128813569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003445134.1;locus_tag=VA249_RS23845;product=nitronate monooxygenase;protein_id=WP_128813569.1;transl_table=11 NZ_AP024168.1 RefSeq gene 186804 187685 . - . ID=gene-VA249_RS23850;Name=VA249_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23850;old_locus_tag=VYA_45670 NZ_AP024168.1 Protein Homology CDS 186804 187685 . - 0 ID=cds-WP_221072467.1;Parent=gene-VA249_RS23850;Dbxref=Genbank:WP_221072467.1;Name=WP_221072467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008843792.1;locus_tag=VA249_RS23850;product=enoyl-CoA hydratase;protein_id=WP_221072467.1;transl_table=11 NZ_AP024168.1 RefSeq gene 187682 188512 . - . ID=gene-VA249_RS23855;Name=VA249_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23855;old_locus_tag=VYA_45680 NZ_AP024168.1 Protein Homology CDS 187682 188512 . - 0 ID=cds-WP_221072468.1;Parent=gene-VA249_RS23855;Dbxref=Genbank:WP_221072468.1;Name=WP_221072468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012155391.1;locus_tag=VA249_RS23855;product=hypothetical protein;protein_id=WP_221072468.1;transl_table=11 NZ_AP024168.1 RefSeq gene 188524 189399 . - . ID=gene-VA249_RS23860;Name=VA249_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23860;old_locus_tag=VYA_45690 NZ_AP024168.1 Protein Homology CDS 188524 189399 . - 0 ID=cds-WP_221072469.1;Parent=gene-VA249_RS23860;Dbxref=Genbank:WP_221072469.1;Name=WP_221072469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012277214.1;locus_tag=VA249_RS23860;product=hypothetical protein;protein_id=WP_221072469.1;transl_table=11 NZ_AP024168.1 RefSeq gene 189401 190291 . - . ID=gene-VA249_RS23865;Name=VA249_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23865;old_locus_tag=VYA_45700 NZ_AP024168.1 Protein Homology CDS 189401 190291 . - 0 ID=cds-WP_221072470.1;Parent=gene-VA249_RS23865;Dbxref=Genbank:WP_221072470.1;Name=WP_221072470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939152.1;locus_tag=VA249_RS23865;product=VOC family protein;protein_id=WP_221072470.1;transl_table=11 NZ_AP024168.1 RefSeq gene 190621 191433 . + . ID=gene-VA249_RS23870;Name=VA249_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23870;old_locus_tag=VYA_45710 NZ_AP024168.1 GeneMarkS-2+ CDS 190621 191433 . + 0 ID=cds-WP_221072471.1;Parent=gene-VA249_RS23870;Dbxref=Genbank:WP_221072471.1;Name=WP_221072471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23870;product=hypothetical protein;protein_id=WP_221072471.1;transl_table=11 NZ_AP024168.1 RefSeq gene 191720 192616 . + . ID=gene-VA249_RS23875;Name=VA249_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23875;old_locus_tag=VYA_45730 NZ_AP024168.1 Protein Homology CDS 191720 192616 . + 0 ID=cds-WP_221072472.1;Parent=gene-VA249_RS23875;Dbxref=Genbank:WP_221072472.1;Name=WP_221072472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04352.1;locus_tag=VA249_RS23875;product=HprK-related kinase A;protein_id=WP_221072472.1;transl_table=11 NZ_AP024168.1 RefSeq gene 192600 193688 . + . ID=gene-VA249_RS23880;Name=VA249_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23880;old_locus_tag=VYA_45740 NZ_AP024168.1 Protein Homology CDS 192600 193688 . + 0 ID=cds-WP_128813562.1;Parent=gene-VA249_RS23880;Dbxref=Genbank:WP_128813562.1;Name=WP_128813562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026257.2;locus_tag=VA249_RS23880;product=nucleotidyltransferase family protein;protein_id=WP_128813562.1;transl_table=11 NZ_AP024168.1 RefSeq gene 193714 193887 . + . ID=gene-VA249_RS24185;Name=VA249_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS24185;old_locus_tag=VYA_45750 NZ_AP024168.1 Protein Homology CDS 193714 193887 . + 0 ID=cds-WP_225927164.1;Parent=gene-VA249_RS24185;Dbxref=Genbank:WP_225927164.1;Name=WP_225927164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013757.2;locus_tag=VA249_RS24185;product=hypothetical protein;protein_id=WP_225927164.1;transl_table=11 NZ_AP024168.1 RefSeq gene 193998 194549 . + . ID=gene-VA249_RS23890;Name=VA249_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23890;old_locus_tag=VYA_45760 NZ_AP024168.1 Protein Homology CDS 193998 194549 . + 0 ID=cds-WP_221072474.1;Parent=gene-VA249_RS23890;Dbxref=Genbank:WP_221072474.1;Name=WP_221072474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=VA249_RS23890;product=SDR family oxidoreductase;protein_id=WP_221072474.1;transl_table=11 NZ_AP024168.1 RefSeq gene 194629 194874 . + . ID=gene-VA249_RS23895;Name=VA249_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23895;old_locus_tag=VYA_45770 NZ_AP024168.1 GeneMarkS-2+ CDS 194629 194874 . + 0 ID=cds-WP_225927165.1;Parent=gene-VA249_RS23895;Dbxref=Genbank:WP_225927165.1;Name=WP_225927165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23895;product=hypothetical protein;protein_id=WP_225927165.1;transl_table=11 NZ_AP024168.1 RefSeq gene 195120 196037 . + . ID=gene-VA249_RS23900;Name=VA249_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23900;old_locus_tag=VYA_45780 NZ_AP024168.1 Protein Homology CDS 195120 196037 . + 0 ID=cds-WP_221072476.1;Parent=gene-VA249_RS23900;Dbxref=Genbank:WP_221072476.1;Name=WP_221072476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009704074.1;locus_tag=VA249_RS23900;product=LysR family transcriptional regulator;protein_id=WP_221072476.1;transl_table=11 NZ_AP024168.1 RefSeq gene 196114 197538 . - . ID=gene-VA249_RS23905;Name=VA249_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23905;old_locus_tag=VYA_45790 NZ_AP024168.1 Protein Homology CDS 196114 197538 . - 0 ID=cds-WP_221072684.1;Parent=gene-VA249_RS23905;Dbxref=Genbank:WP_221072684.1;Name=WP_221072684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429562.1;locus_tag=VA249_RS23905;product=phospholipase D family protein;protein_id=WP_221072684.1;transl_table=11 NZ_AP024168.1 RefSeq gene 197732 198910 . - . ID=gene-VA249_RS23910;Name=VA249_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23910;old_locus_tag=VYA_45800 NZ_AP024168.1 Protein Homology CDS 197732 198910 . - 0 ID=cds-WP_221072478.1;Parent=gene-VA249_RS23910;Dbxref=Genbank:WP_221072478.1;Name=WP_221072478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040521.1;locus_tag=VA249_RS23910;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_221072478.1;transl_table=11 NZ_AP024168.1 RefSeq gene 199219 201204 . - . ID=gene-VA249_RS23915;Name=VA249_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23915;old_locus_tag=VYA_45810 NZ_AP024168.1 Protein Homology CDS 199219 201204 . - 0 ID=cds-WP_221072686.1;Parent=gene-VA249_RS23915;Dbxref=Genbank:WP_221072686.1;Name=WP_221072686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435676.1;locus_tag=VA249_RS23915;product=carboxylesterase family protein;protein_id=WP_221072686.1;transl_table=11 NZ_AP024168.1 RefSeq gene 201443 202411 . - . ID=gene-VA249_RS23920;Name=VA249_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23920;old_locus_tag=VYA_45820 NZ_AP024168.1 Protein Homology CDS 201443 202411 . - 0 ID=cds-WP_221072480.1;Parent=gene-VA249_RS23920;Dbxref=Genbank:WP_221072480.1;Name=WP_221072480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013110145.1;locus_tag=VA249_RS23920;product=linear amide C-N hydrolase;protein_id=WP_221072480.1;transl_table=11 NZ_AP024168.1 RefSeq gene 202686 203876 . - . ID=gene-VA249_RS23925;Name=VA249_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23925;old_locus_tag=VYA_45830 NZ_AP024168.1 Protein Homology CDS 202686 203876 . - 0 ID=cds-WP_225927166.1;Parent=gene-VA249_RS23925;Dbxref=Genbank:WP_225927166.1;Name=WP_225927166.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016401827.1;locus_tag=VA249_RS23925;product=BamA/TamA family outer membrane protein;protein_id=WP_225927166.1;transl_table=11 NZ_AP024168.1 RefSeq gene 203993 204634 . - . ID=gene-VA249_RS23930;Name=VA249_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23930;old_locus_tag=VYA_45840 NZ_AP024168.1 Protein Homology CDS 203993 204634 . - 0 ID=cds-WP_221072481.1;Parent=gene-VA249_RS23930;Dbxref=Genbank:WP_221072481.1;Name=WP_221072481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005435642.1;locus_tag=VA249_RS23930;product=TRIC cation channel family protein;protein_id=WP_221072481.1;transl_table=11 NZ_AP024168.1 RefSeq gene 204727 205908 . - . ID=gene-VA249_RS23935;Name=VA249_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23935;old_locus_tag=VYA_45850 NZ_AP024168.1 Protein Homology CDS 204727 205908 . - 0 ID=cds-WP_221072482.1;Parent=gene-VA249_RS23935;Dbxref=Genbank:WP_221072482.1;Name=WP_221072482.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017037868.1;locus_tag=VA249_RS23935;product=patatin-like phospholipase family protein;protein_id=WP_221072482.1;transl_table=11 NZ_AP024168.1 RefSeq gene 206138 207784 . - . ID=gene-VA249_RS23940;Name=VA249_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23940;old_locus_tag=VYA_45860 NZ_AP024168.1 Protein Homology CDS 206138 207784 . - 0 ID=cds-WP_225927167.1;Parent=gene-VA249_RS23940;Dbxref=Genbank:WP_225927167.1;Name=WP_225927167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728271.1;locus_tag=VA249_RS23940;product=hypothetical protein;protein_id=WP_225927167.1;transl_table=11 NZ_AP024168.1 RefSeq gene 207997 209697 . - . ID=gene-VA249_RS23945;Name=VA249_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23945;old_locus_tag=VYA_45870 NZ_AP024168.1 Protein Homology CDS 207997 209697 . - 0 ID=cds-WP_221072483.1;Parent=gene-VA249_RS23945;Dbxref=Genbank:WP_221072483.1;Name=WP_221072483.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013283.2;locus_tag=VA249_RS23945;product=autotransporter assembly complex protein TamA;protein_id=WP_221072483.1;transl_table=11 NZ_AP024168.1 RefSeq gene 209861 211429 . - . ID=gene-VA249_RS23950;Name=VA249_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23950;old_locus_tag=VYA_45880 NZ_AP024168.1 Protein Homology CDS 209861 211429 . - 0 ID=cds-WP_221072484.1;Parent=gene-VA249_RS23950;Dbxref=Genbank:WP_221072484.1;Name=WP_221072484.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006560.0;locus_tag=VA249_RS23950;product=amidohydrolase family protein;protein_id=WP_221072484.1;transl_table=11 NZ_AP024168.1 RefSeq gene 211674 212420 . - . ID=gene-VA249_RS23955;Name=VA249_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23955;old_locus_tag=VYA_45890 NZ_AP024168.1 Protein Homology CDS 211674 212420 . - 0 ID=cds-WP_225927168.1;Parent=gene-VA249_RS23955;Dbxref=Genbank:WP_225927168.1;Name=WP_225927168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017035934.1;locus_tag=VA249_RS23955;product=hypothetical protein;protein_id=WP_225927168.1;transl_table=11 NZ_AP024168.1 RefSeq gene 212801 213832 . + . ID=gene-VA249_RS23960;Name=VA249_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23960;old_locus_tag=VYA_45900 NZ_AP024168.1 Protein Homology CDS 212801 213832 . + 0 ID=cds-WP_221072485.1;Parent=gene-VA249_RS23960;Dbxref=Genbank:WP_221072485.1;Name=WP_221072485.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429930.1;locus_tag=VA249_RS23960;product=IS110 family transposase;protein_id=WP_221072485.1;transl_table=11 NZ_AP024168.1 RefSeq gene 214077 214283 . - . ID=gene-VA249_RS23965;Name=VA249_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23965;old_locus_tag=VYA_45910 NZ_AP024168.1 GeneMarkS-2+ CDS 214077 214283 . - 0 ID=cds-WP_221072486.1;Parent=gene-VA249_RS23965;Dbxref=Genbank:WP_221072486.1;Name=WP_221072486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23965;product=hypothetical protein;protein_id=WP_221072486.1;transl_table=11 NZ_AP024168.1 RefSeq gene 214385 214645 . + . ID=gene-VA249_RS23970;Name=VA249_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23970;old_locus_tag=VYA_45920 NZ_AP024168.1 Protein Homology CDS 214385 214645 . + 0 ID=cds-WP_221072487.1;Parent=gene-VA249_RS23970;Dbxref=Genbank:WP_221072487.1;Name=WP_221072487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016799688.1;locus_tag=VA249_RS23970;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_221072487.1;transl_table=11 NZ_AP024168.1 RefSeq gene 214645 214947 . + . ID=gene-VA249_RS23975;Name=VA249_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23975;old_locus_tag=VYA_45930 NZ_AP024168.1 Protein Homology CDS 214645 214947 . + 0 ID=cds-WP_221072488.1;Parent=gene-VA249_RS23975;Dbxref=Genbank:WP_221072488.1;Name=WP_221072488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647375.1;locus_tag=VA249_RS23975;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_221072488.1;transl_table=11 NZ_AP024168.1 RefSeq gene 215140 215367 . + . ID=gene-VA249_RS23980;Name=VA249_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23980;old_locus_tag=VYA_45940 NZ_AP024168.1 GeneMarkS-2+ CDS 215140 215367 . + 0 ID=cds-WP_221072490.1;Parent=gene-VA249_RS23980;Dbxref=Genbank:WP_221072490.1;Name=WP_221072490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23980;product=hypothetical protein;protein_id=WP_221072490.1;transl_table=11 NZ_AP024168.1 RefSeq gene 215494 216594 . - . ID=gene-VA249_RS23985;Name=VA249_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23985;old_locus_tag=VYA_45950 NZ_AP024168.1 Protein Homology CDS 215494 216594 . - 0 ID=cds-WP_221072492.1;Parent=gene-VA249_RS23985;Dbxref=Genbank:WP_221072492.1;Name=WP_221072492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017018434.1;locus_tag=VA249_RS23985;product=Fic family protein;protein_id=WP_221072492.1;transl_table=11 NZ_AP024168.1 RefSeq gene 216719 217054 . - . ID=gene-VA249_RS23990;Name=VA249_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23990;old_locus_tag=VYA_45960 NZ_AP024168.1 GeneMarkS-2+ CDS 216719 217054 . - 0 ID=cds-WP_221072493.1;Parent=gene-VA249_RS23990;Dbxref=Genbank:WP_221072493.1;Name=WP_221072493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VA249_RS23990;product=hypothetical protein;protein_id=WP_221072493.1;transl_table=11 NZ_AP024168.1 RefSeq pseudogene 217941 218146 . + . ID=gene-VA249_RS24190;Name=VA249_RS24190;end_range=218146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VA249_RS24190;partial=true;pseudo=true NZ_AP024168.1 Protein Homology CDS 217941 218146 . + 0 ID=cds-VA249_RS24190;Parent=gene-VA249_RS24190;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=218146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548923.1;locus_tag=VA249_RS24190;partial=true;product=transposase zinc-binding domain-containing protein;pseudo=true;transl_table=11 NZ_AP024168.1 RefSeq gene 218213 219115 . - . ID=gene-VA249_RS23995;Name=VA249_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23995;old_locus_tag=VYA_45970 NZ_AP024168.1 Protein Homology CDS 218213 219115 . - 0 ID=cds-WP_221072495.1;Parent=gene-VA249_RS23995;Dbxref=Genbank:WP_221072495.1;Name=WP_221072495.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450779.1;locus_tag=VA249_RS23995;product=EamA family transporter;protein_id=WP_221072495.1;transl_table=11 NZ_AP024168.1 RefSeq gene 219182 219886 . - . ID=gene-VA249_RS24000;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=VA249_RS24000;old_locus_tag=VYA_45980 NZ_AP024168.1 Protein Homology CDS 219182 219886 . - 0 ID=cds-WP_128813561.1;Parent=gene-VA249_RS24000;Dbxref=Genbank:WP_128813561.1;Name=WP_128813561.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005374048.1;locus_tag=VA249_RS24000;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_128813561.1;transl_table=11 NZ_AP024168.1 RefSeq gene 219896 221620 . - . ID=gene-VA249_RS23080;Name=VA249_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VA249_RS23080 NZ_AP024168.1 Protein Homology CDS 219896 221620 . - 0 ID=cds-WP_221072497.1;Parent=gene-VA249_RS23080;Dbxref=Genbank:WP_221072497.1;Name=WP_221072497.1;Ontology_term=GO:0033223,GO:0033225,GO:0005887,GO:0055052;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011151850.1;locus_tag=VA249_RS23080;product=putative 2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_221072497.1;transl_table=11 ###