locus-tag class description GPY28_RS00010 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GPY28_RS00050 PF00216 Bacterial DNA-binding protein GPY28_RS00055 PF00216 Bacterial DNA-binding protein GPY28_RS00085 PF00436 Single-strand binding protein family GPY28_RS00145 PF13614 AAA domain GPY28_RS00150 PF02195 ParB-like nuclease domain GPY28_RS00150 PF17762 HTH domain found in ParB protein GPY28_RS00265 PF18766 SWI2/SNF2 ATPase GPY28_RS00265 PF11867 Domain of unknown function (DUF3387) GPY28_RS00265 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GPY28_RS00270 PF01420 Type I restriction modification DNA specificity domain GPY28_RS00275 PF02384 N-6 DNA Methylase GPY28_RS00365 PF05016 ParE toxin of type II toxin-antitoxin system, parDE GPY28_RS00435 PF10091 Putative glucoamylase GPY28_RS00435 PF06165 Glycosyltransferase family 36 GPY28_RS00435 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GPY28_RS00455 PF01145 SPFH domain / Band 7 family GPY28_RS00455 PF12221 Bacterial membrane protein N terminal GPY28_RS00465 PF06965 Na+/H+ antiporter 1 GPY28_RS00470 PF00330 Aconitase family (aconitate hydratase) GPY28_RS00470 PF00694 Aconitase C-terminal domain GPY28_RS00475 PF00313 'Cold-shock' DNA-binding domain GPY28_RS00495 PF00313 'Cold-shock' DNA-binding domain GPY28_RS00515 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS00520 PF16874 Glycosyl hydrolase family 36 C-terminal domain GPY28_RS00520 PF16875 Glycosyl hydrolase family 36 N-terminal domain GPY28_RS00525 PF00474 Sodium:solute symporter family GPY28_RS00530 PF16363 GDP-mannose 4,6 dehydratase GPY28_RS00535 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GPY28_RS00535 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GPY28_RS00540 PF10509 Galactokinase galactose-binding signature GPY28_RS00540 PF08544 GHMP kinases C terminal GPY28_RS00540 PF00288 GHMP kinases N terminal domain GPY28_RS00550 PF02028 BCCT, betaine/carnitine/choline family transporter GPY28_RS00575 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system GPY28_RS00580 PF01381 Helix-turn-helix GPY28_RS00690 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system GPY28_RS00695 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system GPY28_RS00725 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS00725 PF00072 Response regulator receiver domain GPY28_RS00730 PF00563 EAL domain GPY28_RS00730 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS00730 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS00780 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system GPY28_RS00795 PF00313 'Cold-shock' DNA-binding domain GPY28_RS00840 PF00884 Sulfatase GPY28_RS00845 PF13186 Iron-sulfur cluster-binding domain GPY28_RS00845 PF04055 Radical SAM superfamily GPY28_RS00850 PF17863 AAA lid domain GPY28_RS00850 PF07726 ATPase family associated with various cellular activities (AAA) GPY28_RS00865 PF00092 von Willebrand factor type A domain GPY28_RS00880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY28_RS00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS00885 PF03466 LysR substrate binding domain GPY28_RS00890 PF00781 Diacylglycerol kinase catalytic domain GPY28_RS00895 PF04076 Bacterial OB fold (BOF) protein GPY28_RS00905 PF08774 VRR-NUC domain GPY28_RS00905 PF18081 Fanconi anemia-associated nuclease SAP domain GPY28_RS00920 PF03606 C4-dicarboxylate anaerobic carrier GPY28_RS00930 PF00814 Glycoprotease family GPY28_RS00930 PF00583 Acetyltransferase (GNAT) family GPY28_RS00940 PF00072 Response regulator receiver domain GPY28_RS00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS00945 PF00155 Aminotransferase class I and II GPY28_RS00950 PF01926 50S ribosome-binding GTPase GPY28_RS00955 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS00955 PF09456 RcsC Alpha-Beta-Loop (ABL) GPY28_RS00955 PF00072 Response regulator receiver domain GPY28_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS00960 PF13188 PAS domain GPY28_RS00960 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS00960 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS00960 PF00563 EAL domain GPY28_RS00965 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS00965 PF00072 Response regulator receiver domain GPY28_RS00970 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS00980 PF00072 Response regulator receiver domain GPY28_RS00980 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS00990 PF00072 Response regulator receiver domain GPY28_RS00990 PF01584 CheW-like domain GPY28_RS00995 PF07963 Prokaryotic N-terminal methylation motif GPY28_RS00995 PF08334 Type II secretion system (T2SS), protein G GPY28_RS01005 PF00892 EamA-like transporter family GPY28_RS01025 PF00893 Small Multidrug Resistance protein GPY28_RS01030 PF00892 EamA-like transporter family GPY28_RS01045 PF00171 Aldehyde dehydrogenase family GPY28_RS01060 PF13187 4Fe-4S dicluster domain GPY28_RS01060 PF01645 Conserved region in glutamate synthase GPY28_RS01065 PF00141 Peroxidase GPY28_RS01080 PF01757 Acyltransferase family GPY28_RS01090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY28_RS01095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY28_RS01115 PF00571 CBS domain GPY28_RS01115 PF01769 Divalent cation transporter GPY28_RS01115 PF03448 MgtE intracellular N domain GPY28_RS01150 PF01327 Polypeptide deformylase GPY28_RS01155 PF09278 MerR, DNA binding GPY28_RS01155 PF00376 MerR family regulatory protein GPY28_RS01165 PF02253 Phospholipase A1 GPY28_RS01185 PF00005 ABC transporter GPY28_RS01185 PF00664 ABC transporter transmembrane region GPY28_RS01190 PF14579 Helix-hairpin-helix motif GPY28_RS01190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY28_RS01190 PF02811 PHP domain GPY28_RS01190 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY28_RS01190 PF11490 DNA polymerase III polC-type N-terminus II GPY28_RS01190 PF00929 Exonuclease GPY28_RS01215 PF12833 Helix-turn-helix domain GPY28_RS01220 PF02627 Carboxymuconolactone decarboxylase family GPY28_RS01225 PF00892 EamA-like transporter family GPY28_RS01230 PF03466 LysR substrate binding domain GPY28_RS01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS01235 PF00753 Metallo-beta-lactamase superfamily GPY28_RS01235 PF16123 Hydroxyacylglutathione hydrolase C-terminus GPY28_RS01245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY28_RS01250 PF02347 Glycine cleavage system P-protein GPY28_RS01255 PF01597 Glycine cleavage H-protein GPY28_RS01260 PF00464 Serine hydroxymethyltransferase GPY28_RS01270 PF01571 Aminomethyltransferase folate-binding domain GPY28_RS01270 PF08669 Glycine cleavage T-protein C-terminal barrel domain GPY28_RS01290 PF00873 AcrB/AcrD/AcrF family GPY28_RS01300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY28_RS01300 PF02378 Phosphotransferase system, EIIC GPY28_RS01305 PF00294 pfkB family carbohydrate kinase GPY28_RS01310 PF00381 PTS HPr component phosphorylation site GPY28_RS01310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY28_RS01315 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS01315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY28_RS01330 PF00563 EAL domain GPY28_RS01330 PF01590 GAF domain GPY28_RS01330 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS01330 PF00989 PAS fold GPY28_RS01335 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS01340 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS01350 PF00005 ABC transporter GPY28_RS01360 PF00465 Iron-containing alcohol dehydrogenase GPY28_RS01365 PF12833 Helix-turn-helix domain GPY28_RS01365 PF06719 AraC-type transcriptional regulator N-terminus GPY28_RS01375 PF00704 Glycosyl hydrolases family 18 GPY28_RS01375 PF06483 Chitinase C GPY28_RS01380 PF01797 Transposase IS200 like GPY28_RS01385 PF00483 Nucleotidyl transferase GPY28_RS01390 PF01268 Formate--tetrahydrofolate ligase GPY28_RS01395 PF00294 pfkB family carbohydrate kinase GPY28_RS01410 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS01415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS01415 PF00672 HAMP domain GPY28_RS01415 PF12729 Four helix bundle sensory module for signal transduction GPY28_RS01425 PF04336 Acyl carrier protein phosphodiesterase GPY28_RS01430 PF00270 DEAD/DEAH box helicase GPY28_RS01430 PF00271 Helicase conserved C-terminal domain GPY28_RS01450 PF01292 Prokaryotic cytochrome b561 GPY28_RS01455 PF04264 YceI-like domain GPY28_RS01460 PF01226 Formate/nitrite transporter GPY28_RS01465 PF03466 LysR substrate binding domain GPY28_RS01465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS01470 PF06496 Protein of unknown function (DUF1097) GPY28_RS01475 PF11398 Protein of unknown function (DUF2813) GPY28_RS01480 PF02872 5'-nucleotidase, C-terminal domain GPY28_RS01480 PF00149 Calcineurin-like phosphoesterase GPY28_RS01485 PF03741 Integral membrane protein TerC family GPY28_RS01505 PF12262 Bacterial virulence factor lipase N-terminal GPY28_RS01510 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY28_RS01525 PF03061 Thioesterase superfamily GPY28_RS01535 PF12793 Sugar transport-related sRNA regulator N-term GPY28_RS01535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS01560 PF00684 DnaJ central domain GPY28_RS01560 PF01556 DnaJ C terminal domain GPY28_RS01560 PF00226 DnaJ domain GPY28_RS01570 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS01570 PF00563 EAL domain GPY28_RS01570 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS01570 PF13188 PAS domain GPY28_RS01575 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY28_RS01575 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY28_RS01575 PF07055 Enoyl reductase FAD binding domain GPY28_RS01580 PF13472 GDSL-like Lipase/Acylhydrolase family GPY28_RS01585 PF00005 ABC transporter GPY28_RS01600 PF02626 Carboxyltransferase domain, subdomain A and B GPY28_RS01605 PF02682 Carboxyltransferase domain, subdomain C and D GPY28_RS01610 PF03746 LamB/YcsF family GPY28_RS01615 PF08448 PAS fold GPY28_RS01615 PF00563 EAL domain GPY28_RS01615 PF13426 PAS domain GPY28_RS01615 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS01615 PF08447 PAS fold GPY28_RS01615 PF05231 MASE1 GPY28_RS01620 PF16363 GDP-mannose 4,6 dehydratase GPY28_RS01630 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS01630 PF04886 PT repeat GPY28_RS01630 PF00593 TonB dependent receptor GPY28_RS01635 PF03466 LysR substrate binding domain GPY28_RS01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS01640 PF00583 Acetyltransferase (GNAT) family GPY28_RS01640 PF13607 Succinyl-CoA ligase like flavodoxin domain GPY28_RS01640 PF13380 CoA binding domain GPY28_RS01645 PF05036 Sporulation related domain GPY28_RS01650 PF01820 D-ala D-ala ligase N-terminus GPY28_RS01650 PF07478 D-ala D-ala ligase C-terminus GPY28_RS01660 PF01253 Translation initiation factor SUI1 GPY28_RS01710 PF05840 Bacteriophage replication gene A protein (GPA) GPY28_RS01740 PF00263 Bacterial type II and III secretion system protein GPY28_RS01740 PF03958 Bacterial type II/III secretion system short domain GPY28_RS01770 PF03466 LysR substrate binding domain GPY28_RS01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS01785 PF03701 Uncharacterised protein family (UPF0181) GPY28_RS01800 PF00072 Response regulator receiver domain GPY28_RS01800 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS01810 PF02233 NAD(P) transhydrogenase beta subunit GPY28_RS01815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY28_RS01815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY28_RS01815 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GPY28_RS01830 PF00072 Response regulator receiver domain GPY28_RS01830 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS01835 PF00563 EAL domain GPY28_RS01835 PF01590 GAF domain GPY28_RS01835 PF00360 Phytochrome region GPY28_RS01835 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS01845 PF03459 TOBE domain GPY28_RS01845 PF00005 ABC transporter GPY28_RS01850 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS01860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY28_RS01860 PF07685 CobB/CobQ-like glutamine amidotransferase domain GPY28_RS01865 PF04076 Bacterial OB fold (BOF) protein GPY28_RS01875 PF08443 RimK-like ATP-grasp domain GPY28_RS01875 PF18030 RimK PreATP-grasp domain GPY28_RS01880 PF00155 Aminotransferase class I and II GPY28_RS01885 PF12852 Cupin GPY28_RS01885 PF12833 Helix-turn-helix domain GPY28_RS01890 PF01554 MatE GPY28_RS01900 PF03477 ATP cone domain GPY28_RS01900 PF13597 Anaerobic ribonucleoside-triphosphate reductase GPY28_RS01915 PF04143 Sulphur transport GPY28_RS01925 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS01925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY28_RS01930 PF01177 Asp/Glu/Hydantoin racemase GPY28_RS01935 PF02567 Phenazine biosynthesis-like protein GPY28_RS01950 PF00384 Molybdopterin oxidoreductase GPY28_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS01960 PF03466 LysR substrate binding domain GPY28_RS01965 PF02634 FdhD/NarQ family GPY28_RS01970 PF07690 Major Facilitator Superfamily GPY28_RS01975 PF00072 Response regulator receiver domain GPY28_RS01975 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS01980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS01980 PF07730 Histidine kinase GPY28_RS01980 PF05231 MASE1 GPY28_RS01985 PF07690 Major Facilitator Superfamily GPY28_RS01990 PF01238 Phosphomannose isomerase type I GPY28_RS02010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY28_RS02010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY28_RS02015 PF00085 Thioredoxin GPY28_RS02020 PF07690 Major Facilitator Superfamily GPY28_RS02025 PF11756 Nitrous oxide-stimulated promoter GPY28_RS02030 PF13302 Acetyltransferase (GNAT) domain GPY28_RS02040 PF00593 TonB dependent receptor GPY28_RS02040 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS02050 PF03605 Anaerobic c4-dicarboxylate membrane transporter GPY28_RS02065 PF10414 Sirohaem synthase dimerisation region GPY28_RS02065 PF14824 Sirohaem biosynthesis protein central GPY28_RS02065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY28_RS02070 PF01226 Formate/nitrite transporter GPY28_RS02075 PF13806 Rieske-like [2Fe-2S] domain GPY28_RS02080 PF18267 Rubredoxin NAD+ reductase C-terminal domain GPY28_RS02080 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS02080 PF04324 BFD-like [2Fe-2S] binding domain GPY28_RS02080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GPY28_RS02080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GPY28_RS02085 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY28_RS02085 PF14760 Rnk N-terminus GPY28_RS02090 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS02090 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS02090 PF00563 EAL domain GPY28_RS02100 PF00563 EAL domain GPY28_RS02100 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS02100 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS02105 PF00296 Luciferase-like monooxygenase GPY28_RS02135 PF00128 Alpha amylase, catalytic domain GPY28_RS02135 PF09154 Domain of unknown function (DUF1939) GPY28_RS02150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS02150 PF00672 HAMP domain GPY28_RS02155 PF01168 Alanine racemase, N-terminal domain GPY28_RS02155 PF00842 Alanine racemase, C-terminal domain GPY28_RS02170 PF09330 D-lactate dehydrogenase, membrane binding GPY28_RS02170 PF01565 FAD binding domain GPY28_RS02175 PF03466 LysR substrate binding domain GPY28_RS02175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS02190 PF05762 VWA domain containing CoxE-like protein GPY28_RS02195 PF17868 AAA lid domain GPY28_RS02195 PF07728 AAA domain (dynein-related subfamily) GPY28_RS02195 PF12592 Protein of unknown function (DUF3763) GPY28_RS02205 PF01212 Beta-eliminating lyase GPY28_RS02215 PF03606 C4-dicarboxylate anaerobic carrier GPY28_RS02225 PF08212 Lipocalin-like domain GPY28_RS02235 PF13476 AAA domain GPY28_RS02240 PF00149 Calcineurin-like phosphoesterase GPY28_RS02240 PF12320 Type 5 capsule protein repressor C-terminal domain GPY28_RS02255 PF04717 Type VI secretion system, phage-baseplate injector GPY28_RS02255 PF16671 Actin cross-linking domain GPY28_RS02265 PF10431 C-terminal, D2-small domain, of ClpB protein GPY28_RS02265 PF17871 AAA lid domain GPY28_RS02265 PF07724 AAA domain (Cdc48 subfamily) GPY28_RS02265 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS02325 PF13677 Membrane MotB of proton-channel complex MotA/MotB GPY28_RS02325 PF00691 OmpA family GPY28_RS02345 PF00069 Protein kinase domain GPY28_RS02345 PF03793 PASTA domain GPY28_RS02365 PF00072 Response regulator receiver domain GPY28_RS02365 PF00211 Adenylate and Guanylate cyclase catalytic domain GPY28_RS02395 PF13806 Rieske-like [2Fe-2S] domain GPY28_RS02395 PF04324 BFD-like [2Fe-2S] binding domain GPY28_RS02395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GPY28_RS02395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GPY28_RS02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS02395 PF18267 Rubredoxin NAD+ reductase C-terminal domain GPY28_RS02400 PF00005 ABC transporter GPY28_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS02410 PF00005 ABC transporter GPY28_RS02420 PF03861 ANTAR domain GPY28_RS02420 PF08376 Nitrate and nitrite sensing GPY28_RS02425 PF01738 Dienelactone hydrolase family GPY28_RS02430 PF00591 Glycosyl transferase family, a/b domain GPY28_RS02430 PF02885 Glycosyl transferase family, helical bundle domain GPY28_RS02435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY28_RS02435 PF14824 Sirohaem biosynthesis protein central GPY28_RS02435 PF10414 Sirohaem synthase dimerisation region GPY28_RS02440 PF01568 Molydopterin dinucleotide binding domain GPY28_RS02440 PF00384 Molybdopterin oxidoreductase GPY28_RS02440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY28_RS02450 PF03222 Tryptophan/tyrosine permease family GPY28_RS02460 PF07694 5TMR of 5TMR-LYT GPY28_RS02460 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS02470 PF00082 Subtilase family GPY28_RS02470 PF01483 Proprotein convertase P-domain GPY28_RS02490 PF00072 Response regulator receiver domain GPY28_RS02490 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS02525 PF04314 Copper chaperone PCu(A)C GPY28_RS02535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY28_RS02535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GPY28_RS02545 PF01081 KDPG and KHG aldolase GPY28_RS02550 PF00294 pfkB family carbohydrate kinase GPY28_RS02555 PF07883 Cupin domain GPY28_RS02560 PF05426 Alginate lyase GPY28_RS02560 PF07940 Heparinase II/III-like protein GPY28_RS02565 PF05426 Alginate lyase GPY28_RS02565 PF07940 Heparinase II/III-like protein GPY28_RS02570 PF08787 Alginate lyase GPY28_RS02575 PF08787 Alginate lyase GPY28_RS02590 PF08787 Alginate lyase GPY28_RS02600 PF07729 FCD domain GPY28_RS02600 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS02605 PF07729 FCD domain GPY28_RS02605 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS02610 PF00571 CBS domain GPY28_RS02615 PF11490 DNA polymerase III polC-type N-terminus II GPY28_RS02615 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY28_RS02615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY28_RS02615 PF14579 Helix-hairpin-helix motif GPY28_RS02615 PF00929 Exonuclease GPY28_RS02615 PF02811 PHP domain GPY28_RS02620 PF00474 Sodium:solute symporter family GPY28_RS02640 PF00676 Dehydrogenase E1 component GPY28_RS02645 PF02779 Transketolase, pyrimidine binding domain GPY28_RS02645 PF02780 Transketolase, C-terminal domain GPY28_RS02650 PF02817 e3 binding domain GPY28_RS02650 PF00364 Biotin-requiring enzyme GPY28_RS02650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY28_RS02655 PF01012 Electron transfer flavoprotein domain GPY28_RS02655 PF00766 Electron transfer flavoprotein FAD-binding domain GPY28_RS02665 PF03466 LysR substrate binding domain GPY28_RS02665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS02675 PF13417 Glutathione S-transferase, N-terminal domain GPY28_RS02675 PF00043 Glutathione S-transferase, C-terminal domain GPY28_RS02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS02680 PF03466 LysR substrate binding domain GPY28_RS02690 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS02695 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS02700 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS02705 PF00005 ABC transporter GPY28_RS02735 PF02028 BCCT, betaine/carnitine/choline family transporter GPY28_RS02745 PF00171 Aldehyde dehydrogenase family GPY28_RS02760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY28_RS02760 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS02765 PF01040 UbiA prenyltransferase family GPY28_RS02775 PF00510 Cytochrome c oxidase subunit III GPY28_RS02780 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY28_RS02785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GPY28_RS02785 PF06481 COX Aromatic Rich Motif GPY28_RS02795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY28_RS02795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY28_RS02800 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS02805 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS02815 PF00171 Aldehyde dehydrogenase family GPY28_RS02820 PF02803 Thiolase, C-terminal domain GPY28_RS02820 PF00108 Thiolase, N-terminal domain GPY28_RS02825 PF09278 MerR, DNA binding GPY28_RS02825 PF00376 MerR family regulatory protein GPY28_RS02830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY28_RS02830 PF02770 Acyl-CoA dehydrogenase, middle domain GPY28_RS02830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY28_RS02835 PF01039 Carboxyl transferase domain GPY28_RS02840 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS02845 PF00682 HMGL-like GPY28_RS02855 PF13426 PAS domain GPY28_RS02855 PF08447 PAS fold GPY28_RS02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS02865 PF01914 MarC family integral membrane protein GPY28_RS02870 PF01258 Prokaryotic dksA/traR C4-type zinc finger GPY28_RS02875 PF02492 CobW/HypB/UreG, nucleotide-binding domain GPY28_RS02875 PF07683 Cobalamin synthesis protein cobW C-terminal domain GPY28_RS02880 PF07683 Cobalamin synthesis protein cobW C-terminal domain GPY28_RS02880 PF02492 CobW/HypB/UreG, nucleotide-binding domain GPY28_RS02885 PF08525 Opacity-associated protein A N-terminal motif GPY28_RS02885 PF01551 Peptidase family M23 GPY28_RS02885 PF01476 LysM domain GPY28_RS02895 PF07683 Cobalamin synthesis protein cobW C-terminal domain GPY28_RS02895 PF02492 CobW/HypB/UreG, nucleotide-binding domain GPY28_RS02900 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS02905 PF01979 Amidohydrolase family GPY28_RS02910 PF01475 Ferric uptake regulator family GPY28_RS02925 PF01925 Sulfite exporter TauE/SafE GPY28_RS02940 PF12146 Serine aminopeptidase, S33 GPY28_RS02945 PF12146 Serine aminopeptidase, S33 GPY28_RS02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS02950 PF03466 LysR substrate binding domain GPY28_RS02955 PF00871 Acetokinase family GPY28_RS02970 PF03880 DbpA RNA binding domain GPY28_RS02970 PF00270 DEAD/DEAH box helicase GPY28_RS02970 PF00271 Helicase conserved C-terminal domain GPY28_RS02975 PF00575 S1 RNA binding domain GPY28_RS02975 PF08206 Ribonuclease B OB domain GPY28_RS02975 PF00773 RNB domain GPY28_RS02980 PF12833 Helix-turn-helix domain GPY28_RS02990 PF12849 PBP superfamily domain GPY28_RS03005 PF00672 HAMP domain GPY28_RS03005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS03005 PF12729 Four helix bundle sensory module for signal transduction GPY28_RS03010 PF00005 ABC transporter GPY28_RS03015 PF00563 EAL domain GPY28_RS03015 PF12792 CSS motif domain associated with EAL GPY28_RS03035 PF00270 DEAD/DEAH box helicase GPY28_RS03035 PF00271 Helicase conserved C-terminal domain GPY28_RS03040 PF07683 Cobalamin synthesis protein cobW C-terminal domain GPY28_RS03040 PF02492 CobW/HypB/UreG, nucleotide-binding domain GPY28_RS03050 PF01470 Pyroglutamyl peptidase GPY28_RS03060 PF00313 'Cold-shock' DNA-binding domain GPY28_RS03070 PF00291 Pyridoxal-phosphate dependent enzyme GPY28_RS03080 PF09905 DNA-binding protein VF530 GPY28_RS03085 PF00271 Helicase conserved C-terminal domain GPY28_RS03085 PF00270 DEAD/DEAH box helicase GPY28_RS03095 PF01925 Sulfite exporter TauE/SafE GPY28_RS03120 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS03120 PF07729 FCD domain GPY28_RS03125 PF01810 LysE type translocator GPY28_RS03135 PF12843 Putative quorum-sensing-regulated virulence factor GPY28_RS03155 PF01329 Pterin 4 alpha carbinolamine dehydratase GPY28_RS03160 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GPY28_RS03165 PF00501 AMP-binding enzyme GPY28_RS03165 PF13193 AMP-binding enzyme C-terminal domain GPY28_RS03175 PF03466 LysR substrate binding domain GPY28_RS03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS03185 PF00892 EamA-like transporter family GPY28_RS03195 PF00465 Iron-containing alcohol dehydrogenase GPY28_RS03200 PF07995 Glucose / Sorbosone dehydrogenase GPY28_RS03210 PF00210 Ferritin-like domain GPY28_RS03215 PF00672 HAMP domain GPY28_RS03215 PF17200 Single Cache domain 2 GPY28_RS03215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS03235 PF13533 Biotin-lipoyl like GPY28_RS03240 PF00072 Response regulator receiver domain GPY28_RS03240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS03245 PF02321 Outer membrane efflux protein GPY28_RS03250 PF00664 ABC transporter transmembrane region GPY28_RS03250 PF00005 ABC transporter GPY28_RS03255 PF00005 ABC transporter GPY28_RS03255 PF00664 ABC transporter transmembrane region GPY28_RS03265 PF04539 Sigma-70 region 3 GPY28_RS03265 PF04542 Sigma-70 region 2 GPY28_RS03265 PF04545 Sigma-70, region 4 GPY28_RS03265 PF00140 Sigma-70 factor, region 1.2 GPY28_RS03270 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS03275 PF03889 Alternative ribosome-rescue factor A GPY28_RS03280 PF00313 'Cold-shock' DNA-binding domain GPY28_RS03300 PF05736 OprF membrane domain GPY28_RS03300 PF00691 OmpA family GPY28_RS03310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY28_RS03310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY28_RS03315 PF01040 UbiA prenyltransferase family GPY28_RS03320 PF02628 Cytochrome oxidase assembly protein GPY28_RS03340 PF00510 Cytochrome c oxidase subunit III GPY28_RS03345 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GPY28_RS03350 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY28_RS03355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GPY28_RS03355 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GPY28_RS03360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY28_RS03360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY28_RS03360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY28_RS03360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY28_RS03370 PF01810 LysE type translocator GPY28_RS03390 PF01557 Fumarylacetoacetate (FAA) hydrolase family GPY28_RS03400 PF00267 Gram-negative porin GPY28_RS03405 PF00892 EamA-like transporter family GPY28_RS03410 PF00462 Glutaredoxin GPY28_RS03425 PF07690 Major Facilitator Superfamily GPY28_RS03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS03430 PF03466 LysR substrate binding domain GPY28_RS03435 PF00563 EAL domain GPY28_RS03435 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS03435 PF08447 PAS fold GPY28_RS03435 PF08448 PAS fold GPY28_RS03440 PF01476 LysM domain GPY28_RS03440 PF01551 Peptidase family M23 GPY28_RS03440 PF08525 Opacity-associated protein A N-terminal motif GPY28_RS03470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS03470 PF00672 HAMP domain GPY28_RS03470 PF02743 Cache domain GPY28_RS03480 PF03222 Tryptophan/tyrosine permease family GPY28_RS03505 PF00248 Aldo/keto reductase family GPY28_RS03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS03510 PF03466 LysR substrate binding domain GPY28_RS03530 PF01638 HxlR-like helix-turn-helix GPY28_RS03545 PF01758 Sodium Bile acid symporter family GPY28_RS03555 PF01161 Phosphatidylethanolamine-binding protein GPY28_RS03560 PF02567 Phenazine biosynthesis-like protein GPY28_RS03565 PF01042 Endoribonuclease L-PSP GPY28_RS03570 PF10282 Lactonase, 7-bladed beta-propeller GPY28_RS03575 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY28_RS03575 PF02838 Glycosyl hydrolase family 20, domain 2 GPY28_RS03580 PF01081 KDPG and KHG aldolase GPY28_RS03585 PF00294 pfkB family carbohydrate kinase GPY28_RS03590 PF00474 Sodium:solute symporter family GPY28_RS03600 PF07969 Amidohydrolase family GPY28_RS03610 PF02685 Glucokinase GPY28_RS03610 PF01418 Helix-turn-helix domain, rpiR family GPY28_RS03610 PF01380 SIS domain GPY28_RS03620 PF00005 ABC transporter GPY28_RS03635 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GPY28_RS03635 PF01568 Molydopterin dinucleotide binding domain GPY28_RS03635 PF12838 4Fe-4S dicluster domain GPY28_RS03635 PF00384 Molybdopterin oxidoreductase GPY28_RS03635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY28_RS03650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS03655 PF00873 AcrB/AcrD/AcrF family GPY28_RS03670 PF17151 Periplasmic sensor domain GPY28_RS03670 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS03680 PF13302 Acetyltransferase (GNAT) domain GPY28_RS03690 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY28_RS03695 PF00873 AcrB/AcrD/AcrF family GPY28_RS03700 PF13533 Biotin-lipoyl like GPY28_RS03710 PF00326 Prolyl oligopeptidase family GPY28_RS03710 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GPY28_RS03715 PF12848 ABC transporter GPY28_RS03715 PF16326 ABC transporter C-terminal domain GPY28_RS03715 PF00005 ABC transporter GPY28_RS03720 PF00582 Universal stress protein family GPY28_RS03725 PF02525 Flavodoxin-like fold GPY28_RS03730 PF00999 Sodium/hydrogen exchanger family GPY28_RS03730 PF02254 TrkA-N domain GPY28_RS03745 PF00128 Alpha amylase, catalytic domain GPY28_RS03750 PF13411 MerR HTH family regulatory protein GPY28_RS03755 PF02627 Carboxymuconolactone decarboxylase family GPY28_RS03765 PF04151 Bacterial pre-peptidase C-terminal domain GPY28_RS03765 PF08453 Peptidase family M9 N-terminal GPY28_RS03765 PF01752 Collagenase GPY28_RS03775 PF17848 Acetyl-coA carboxylase zinc finger domain GPY28_RS03775 PF01039 Carboxyl transferase domain GPY28_RS03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS03780 PF03466 LysR substrate binding domain GPY28_RS03785 PF02743 Cache domain GPY28_RS03785 PF00672 HAMP domain GPY28_RS03785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS03790 PF03824 High-affinity nickel-transport protein GPY28_RS03795 PF02583 Metal-sensitive transcriptional repressor GPY28_RS03800 PF02447 GntP family permease GPY28_RS03805 PF01370 NAD dependent epimerase/dehydratase family GPY28_RS03810 PF01261 Xylose isomerase-like TIM barrel GPY28_RS03815 PF00596 Class II Aldolase and Adducin N-terminal domain GPY28_RS03820 PF17042 Nucleotide-binding C-terminal domain GPY28_RS03820 PF07005 Sugar-binding N-terminal domain GPY28_RS03825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY28_RS03825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY28_RS03830 PF08220 DeoR-like helix-turn-helix domain GPY28_RS03830 PF00455 DeoR C terminal sensor domain GPY28_RS03835 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS03840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS03845 PF00005 ABC transporter GPY28_RS03845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS03850 PF00005 ABC transporter GPY28_RS03850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS03855 PF01554 MatE GPY28_RS03865 PF01584 CheW-like domain GPY28_RS03865 PF00072 Response regulator receiver domain GPY28_RS03875 PF01243 Pyridoxamine 5'-phosphate oxidase GPY28_RS03880 PF06228 Haem utilisation ChuX/HutX GPY28_RS03885 PF04055 Radical SAM superfamily GPY28_RS03890 PF03544 Gram-negative bacterial TonB protein C-terminal GPY28_RS03895 PF01618 MotA/TolQ/ExbB proton channel family GPY28_RS03900 PF02472 Biopolymer transport protein ExbD/TolR GPY28_RS03910 PF01032 FecCD transport family GPY28_RS03915 PF00005 ABC transporter GPY28_RS03930 PF01797 Transposase IS200 like GPY28_RS03960 PF01467 Cytidylyltransferase-like GPY28_RS03965 PF02540 NAD synthase GPY28_RS03970 PF03473 MOSC domain GPY28_RS03970 PF03476 MOSC N-terminal beta barrel domain GPY28_RS03970 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY28_RS03970 PF03473 MOSC domain GPY28_RS03970 PF03476 MOSC N-terminal beta barrel domain GPY28_RS03970 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY28_RS03975 PF01679 Proteolipid membrane potential modulator GPY28_RS03985 PF01979 Amidohydrolase family GPY28_RS03990 PF05661 Protein of unknown function (DUF808) GPY28_RS04000 PF01032 FecCD transport family GPY28_RS04005 PF01032 FecCD transport family GPY28_RS04010 PF01497 Periplasmic binding protein GPY28_RS04015 PF00593 TonB dependent receptor GPY28_RS04015 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS04020 PF00664 ABC transporter transmembrane region GPY28_RS04020 PF00005 ABC transporter GPY28_RS04025 PF00664 ABC transporter transmembrane region GPY28_RS04025 PF00005 ABC transporter GPY28_RS04050 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS04055 PF14785 Maltose transport system permease protein MalF P2 domain GPY28_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS04060 PF01547 Bacterial extracellular solute-binding protein GPY28_RS04065 PF00005 ABC transporter GPY28_RS04065 PF08402 TOBE domain GPY28_RS04070 PF02397 Bacterial sugar transferase GPY28_RS04085 PF02706 Chain length determinant protein GPY28_RS04085 PF13614 AAA domain GPY28_RS04085 PF13807 G-rich domain on putative tyrosine kinase GPY28_RS04095 PF00534 Glycosyl transferases group 1 GPY28_RS04095 PF13439 Glycosyltransferase Family 4 GPY28_RS04130 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS04130 PF16925 Tetracyclin repressor-like, C-terminal domain GPY28_RS04135 PF00107 Zinc-binding dehydrogenase GPY28_RS04135 PF16884 N-terminal domain of oxidoreductase GPY28_RS04140 PF13417 Glutathione S-transferase, N-terminal domain GPY28_RS04145 PF06628 Catalase-related immune-responsive GPY28_RS04145 PF00199 Catalase GPY28_RS04150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY28_RS04150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY28_RS04160 PF18113 Rubredoxin binding C-terminal domain GPY28_RS04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS04165 PF00258 Flavodoxin GPY28_RS04165 PF00753 Metallo-beta-lactamase superfamily GPY28_RS04165 PF00301 Rubredoxin GPY28_RS04170 PF01590 GAF domain GPY28_RS04170 PF00158 Sigma-54 interaction domain GPY28_RS04180 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS04185 PF00127 Copper binding proteins, plastocyanin/azurin family GPY28_RS04195 PF01266 FAD dependent oxidoreductase GPY28_RS04200 PF18113 Rubredoxin binding C-terminal domain GPY28_RS04200 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS04210 PF00355 Rieske [2Fe-2S] domain GPY28_RS04210 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GPY28_RS04215 PF02028 BCCT, betaine/carnitine/choline family transporter GPY28_RS04220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS04220 PF03466 LysR substrate binding domain GPY28_RS04225 PF02386 Cation transport protein GPY28_RS04230 PF02080 TrkA-C domain GPY28_RS04230 PF02254 TrkA-N domain GPY28_RS04235 PF00072 Response regulator receiver domain GPY28_RS04235 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS04240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS04240 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS04240 PF00989 PAS fold GPY28_RS04240 PF16736 Single Cache-like GPY28_RS04245 PF00005 ABC transporter GPY28_RS04245 PF00664 ABC transporter transmembrane region GPY28_RS04250 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS04250 PF00593 TonB dependent receptor GPY28_RS04255 PF00005 ABC transporter GPY28_RS04260 PF01497 Periplasmic binding protein GPY28_RS04265 PF01032 FecCD transport family GPY28_RS04275 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS04280 PF00664 ABC transporter transmembrane region GPY28_RS04280 PF00005 ABC transporter GPY28_RS04290 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS04295 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS04305 PF02743 Cache domain GPY28_RS04305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS04305 PF00672 HAMP domain GPY28_RS04310 PF07726 ATPase family associated with various cellular activities (AAA) GPY28_RS04310 PF17863 AAA lid domain GPY28_RS04315 PF01882 Protein of unknown function DUF58 GPY28_RS04325 PF13519 von Willebrand factor type A domain GPY28_RS04330 PF07584 Aerotolerance regulator N-terminal GPY28_RS04330 PF13519 von Willebrand factor type A domain GPY28_RS04345 PF00005 ABC transporter GPY28_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS04360 PF12849 PBP superfamily domain GPY28_RS04365 PF00672 HAMP domain GPY28_RS04365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS04385 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS04385 PF00593 TonB dependent receptor GPY28_RS04390 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GPY28_RS04390 PF00326 Prolyl oligopeptidase family GPY28_RS04395 PF00270 DEAD/DEAH box helicase GPY28_RS04395 PF00271 Helicase conserved C-terminal domain GPY28_RS04405 PF03734 L,D-transpeptidase catalytic domain GPY28_RS04405 PF01476 LysM domain GPY28_RS04405 PF17969 L,D-transpeptidase C-terminal domain GPY28_RS04410 PF03441 FAD binding domain of DNA photolyase GPY28_RS04410 PF00875 DNA photolyase GPY28_RS04415 PF13411 MerR HTH family regulatory protein GPY28_RS04420 PF08349 Protein of unknown function (DUF1722) GPY28_RS04430 PF01048 Phosphorylase superfamily GPY28_RS04445 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS04450 PF11742 Protein of unknown function (DUF3302) GPY28_RS04455 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS04455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS04460 PF07155 ECF-type riboflavin transporter, S component GPY28_RS04465 PF12558 ATP-binding cassette cobalt transporter GPY28_RS04465 PF00005 ABC transporter GPY28_RS04485 PF13237 4Fe-4S dicluster domain GPY28_RS04485 PF12801 4Fe-4S binding domain GPY28_RS04490 PF12838 4Fe-4S dicluster domain GPY28_RS04490 PF12800 4Fe-4S binding domain GPY28_RS04495 PF00583 Acetyltransferase (GNAT) family GPY28_RS04510 PF12945 Flagellar protein YcgR GPY28_RS04510 PF07238 PilZ domain GPY28_RS04515 PF13609 Gram-negative porin GPY28_RS04520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS04520 PF00672 HAMP domain GPY28_RS04520 PF12729 Four helix bundle sensory module for signal transduction GPY28_RS04525 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY28_RS04525 PF13654 AAA domain GPY28_RS04535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS04535 PF00005 ABC transporter GPY28_RS04540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GPY28_RS04540 PF00326 Prolyl oligopeptidase family GPY28_RS04545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS04545 PF03466 LysR substrate binding domain GPY28_RS04550 PF02652 L-lactate permease GPY28_RS04555 PF01070 FMN-dependent dehydrogenase GPY28_RS04565 PF00924 Mechanosensitive ion channel GPY28_RS04570 PF00194 Eukaryotic-type carbonic anhydrase GPY28_RS04600 PF08240 Alcohol dehydrogenase GroES-like domain GPY28_RS04600 PF00107 Zinc-binding dehydrogenase GPY28_RS04605 PF00155 Aminotransferase class I and II GPY28_RS04610 PF00563 EAL domain GPY28_RS04610 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS04610 PF13188 PAS domain GPY28_RS04610 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS04625 PF00080 Copper/zinc superoxide dismutase (SODC) GPY28_RS04630 PF13426 PAS domain GPY28_RS04630 PF00072 Response regulator receiver domain GPY28_RS04630 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS04630 PF08448 PAS fold GPY28_RS04630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS04635 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS04635 PF00072 Response regulator receiver domain GPY28_RS04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS04655 PF03466 LysR substrate binding domain GPY28_RS04660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY28_RS04695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS04695 PF03466 LysR substrate binding domain GPY28_RS04710 PF18269 T3SS EscN ATPase C-terminal domain GPY28_RS04710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY28_RS04720 PF14842 FliG N-terminal domain GPY28_RS04720 PF14841 FliG middle domain GPY28_RS04720 PF01706 FliG C-terminal domain GPY28_RS04725 PF08345 Flagellar M-ring protein C-terminal GPY28_RS04725 PF01514 Secretory protein of YscJ/FliF family GPY28_RS04730 PF02049 Flagellar hook-basal body complex protein FliE GPY28_RS04735 PF00158 Sigma-54 interaction domain GPY28_RS04735 PF00072 Response regulator receiver domain GPY28_RS04735 PF02954 Bacterial regulatory protein, Fis family GPY28_RS04750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY28_RS04755 PF00813 FliP family GPY28_RS04760 PF01313 Bacterial export proteins, family 3 GPY28_RS04765 PF01311 Bacterial export proteins, family 1 GPY28_RS04770 PF01312 FlhB HrpN YscU SpaS Family GPY28_RS04775 PF00771 FHIPEP family GPY28_RS04785 PF00700 Bacterial flagellin C-terminal helical region GPY28_RS04785 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS04795 PF02465 Flagellar hook-associated protein 2 N-terminus GPY28_RS04795 PF07196 Flagellin hook IN motif GPY28_RS04795 PF07195 Flagellar hook-associated protein 2 C-terminus GPY28_RS04800 PF02561 Flagellar protein FliS GPY28_RS04815 PF03748 Flagellar basal body-associated protein FliL GPY28_RS04820 PF04545 Sigma-70, region 4 GPY28_RS04820 PF04542 Sigma-70 region 2 GPY28_RS04825 PF01618 MotA/TolQ/ExbB proton channel family GPY28_RS04830 PF13677 Membrane MotB of proton-channel complex MotA/MotB GPY28_RS04830 PF00691 OmpA family GPY28_RS04845 PF08000 Bacterial PH domain GPY28_RS04870 PF04055 Radical SAM superfamily GPY28_RS04875 PF00923 Transaldolase/Fructose-6-phosphate aldolase GPY28_RS04890 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS04890 PF00672 HAMP domain GPY28_RS04895 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS04895 PF00072 Response regulator receiver domain GPY28_RS04905 PF00583 Acetyltransferase (GNAT) family GPY28_RS04915 PF07690 Major Facilitator Superfamily GPY28_RS04920 PF03466 LysR substrate binding domain GPY28_RS04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS04925 PF00892 EamA-like transporter family GPY28_RS04950 PF13533 Biotin-lipoyl like GPY28_RS04960 PF01594 AI-2E family transporter GPY28_RS04965 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY28_RS04975 PF00175 Oxidoreductase NAD-binding domain GPY28_RS04975 PF00970 Oxidoreductase FAD-binding domain GPY28_RS04985 PF09905 DNA-binding protein VF530 GPY28_RS04990 PF03466 LysR substrate binding domain GPY28_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS05000 PF00881 Nitroreductase family GPY28_RS05005 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GPY28_RS05005 PF12833 Helix-turn-helix domain GPY28_RS05010 PF00128 Alpha amylase, catalytic domain GPY28_RS05010 PF00686 Starch binding domain GPY28_RS05015 PF07943 Penicillin-binding protein 5, C-terminal domain GPY28_RS05015 PF00768 D-alanyl-D-alanine carboxypeptidase GPY28_RS05020 PF00561 alpha/beta hydrolase fold GPY28_RS05035 PF00875 DNA photolyase GPY28_RS05035 PF03441 FAD binding domain of DNA photolyase GPY28_RS05040 PF02469 Fasciclin domain GPY28_RS05045 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GPY28_RS05045 PF18416 N-acetylglucosamine binding protein domain 2 GPY28_RS05050 PF01734 Patatin-like phospholipase GPY28_RS05055 PF01914 MarC family integral membrane protein GPY28_RS05060 PF00881 Nitroreductase family GPY28_RS05065 PF10531 SLBB domain GPY28_RS05065 PF02563 Polysaccharide biosynthesis/export protein GPY28_RS05065 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GPY28_RS05070 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY28_RS05075 PF13614 AAA domain GPY28_RS05075 PF13807 G-rich domain on putative tyrosine kinase GPY28_RS05075 PF02706 Chain length determinant protein GPY28_RS05085 PF08803 Putative mono-oxygenase ydhR GPY28_RS05100 PF00375 Sodium:dicarboxylate symporter family GPY28_RS05115 PF06803 Protein of unknown function (DUF1232) GPY28_RS05125 PF07670 Nucleoside recognition GPY28_RS05130 PF07670 Nucleoside recognition GPY28_RS05145 PF00128 Alpha amylase, catalytic domain GPY28_RS05150 PF00912 Transglycosylase GPY28_RS05155 PF00128 Alpha amylase, catalytic domain GPY28_RS05155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY28_RS05155 PF02806 Alpha amylase, C-terminal all-beta domain GPY28_RS05160 PF02446 4-alpha-glucanotransferase GPY28_RS05165 PF00343 Carbohydrate phosphorylase GPY28_RS05170 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS05170 PF17874 MalT-like TPR region GPY28_RS05185 PF02630 SCO1/SenC GPY28_RS05190 PF00367 phosphotransferase system, EIIB GPY28_RS05190 PF02378 Phosphotransferase system, EIIC GPY28_RS05195 PF03193 RsgA GTPase GPY28_RS05200 PF01797 Transposase IS200 like GPY28_RS05205 PF00375 Sodium:dicarboxylate symporter family GPY28_RS05210 PF08543 Phosphomethylpyrimidine kinase GPY28_RS05220 PF13520 Amino acid permease GPY28_RS05225 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GPY28_RS05225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GPY28_RS05225 PF01276 Orn/Lys/Arg decarboxylase, major domain GPY28_RS05240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY28_RS05240 PF17967 Pullulanase N2 domain GPY28_RS05240 PF11852 Domain of unknown function (DUF3372) GPY28_RS05240 PF18494 Pullulanase Ins domain GPY28_RS05240 PF03714 Bacterial pullanase-associated domain GPY28_RS05245 PF04231 Endonuclease I GPY28_RS05250 PF16657 Maltogenic Amylase, C-terminal domain GPY28_RS05250 PF02903 Alpha amylase, N-terminal ig-like domain GPY28_RS05250 PF00128 Alpha amylase, catalytic domain GPY28_RS05265 PF02264 LamB porin GPY28_RS05270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY28_RS05270 PF00128 Alpha amylase, catalytic domain GPY28_RS05275 PF03315 Serine dehydratase beta chain GPY28_RS05275 PF03313 Serine dehydratase alpha chain GPY28_RS05280 PF00474 Sodium:solute symporter family GPY28_RS05285 PF07690 Major Facilitator Superfamily GPY28_RS05300 PF12697 Alpha/beta hydrolase family GPY28_RS05320 PF03328 HpcH/HpaI aldolase/citrate lyase family GPY28_RS05325 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS05330 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY28_RS05340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY28_RS05355 PF00474 Sodium:solute symporter family GPY28_RS05360 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS05365 PF02796 Helix-turn-helix domain of resolvase GPY28_RS05365 PF00239 Resolvase, N terminal domain GPY28_RS05370 PF07690 Major Facilitator Superfamily GPY28_RS05385 PF01551 Peptidase family M23 GPY28_RS05385 PF04225 Opacity-associated protein A LysM-like domain GPY28_RS05395 PF00675 Insulinase (Peptidase family M16) GPY28_RS05395 PF05193 Peptidase M16 inactive domain GPY28_RS05400 PF17200 Single Cache domain 2 GPY28_RS05400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS05400 PF00672 HAMP domain GPY28_RS05405 PF00005 ABC transporter GPY28_RS05410 PF01032 FecCD transport family GPY28_RS05415 PF01032 FecCD transport family GPY28_RS05420 PF01497 Periplasmic binding protein GPY28_RS05425 PF07660 Secretin and TonB N terminus short domain GPY28_RS05425 PF00593 TonB dependent receptor GPY28_RS05425 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS05430 PF00593 TonB dependent receptor GPY28_RS05430 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS05435 PF02655 ATP-grasp domain GPY28_RS05435 PF00206 Lyase GPY28_RS05440 PF04183 IucA / IucC family GPY28_RS05440 PF06276 Ferric iron reductase FhuF-like transporter GPY28_RS05450 PF04183 IucA / IucC family GPY28_RS05450 PF06276 Ferric iron reductase FhuF-like transporter GPY28_RS05455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GPY28_RS05455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY28_RS05475 PF00005 ABC transporter GPY28_RS05515 PF02566 OsmC-like protein GPY28_RS05520 PF01047 MarR family GPY28_RS05525 PF00578 AhpC/TSA family GPY28_RS05525 PF10417 C-terminal domain of 1-Cys peroxiredoxin GPY28_RS05530 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS05530 PF13192 Thioredoxin domain GPY28_RS05555 PF03466 LysR substrate binding domain GPY28_RS05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS05565 PF01965 DJ-1/PfpI family GPY28_RS05565 PF12833 Helix-turn-helix domain GPY28_RS05570 PF04542 Sigma-70 region 2 GPY28_RS05570 PF08281 Sigma-70, region 4 GPY28_RS05590 PF03473 MOSC domain GPY28_RS05590 PF03475 3-alpha domain GPY28_RS05595 PF00270 DEAD/DEAH box helicase GPY28_RS05595 PF00271 Helicase conserved C-terminal domain GPY28_RS05605 PF00664 ABC transporter transmembrane region GPY28_RS05605 PF00005 ABC transporter GPY28_RS05615 PF01037 Lrp/AsnC ligand binding domain GPY28_RS05645 PF00474 Sodium:solute symporter family GPY28_RS05655 PF14850 DNA-binding domain of Proline dehydrogenase GPY28_RS05655 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GPY28_RS05655 PF01619 Proline dehydrogenase GPY28_RS05655 PF00171 Aldehyde dehydrogenase family GPY28_RS05660 PF12833 Helix-turn-helix domain GPY28_RS05670 PF01243 Pyridoxamine 5'-phosphate oxidase GPY28_RS05670 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GPY28_RS05675 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS05675 PF02743 Cache domain GPY28_RS05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS05680 PF00072 Response regulator receiver domain GPY28_RS05680 PF00158 Sigma-54 interaction domain GPY28_RS05680 PF02954 Bacterial regulatory protein, Fis family GPY28_RS05685 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS05700 PF03412 Peptidase C39 family GPY28_RS05700 PF00664 ABC transporter transmembrane region GPY28_RS05700 PF00005 ABC transporter GPY28_RS05710 PF03358 NADPH-dependent FMN reductase GPY28_RS05715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS05720 PF00246 Zinc carboxypeptidase GPY28_RS05725 PF01418 Helix-turn-helix domain, rpiR family GPY28_RS05725 PF01380 SIS domain GPY28_RS05735 PF01380 SIS domain GPY28_RS05740 PF00367 phosphotransferase system, EIIB GPY28_RS05740 PF02378 Phosphotransferase system, EIIC GPY28_RS05745 PF00267 Gram-negative porin GPY28_RS05750 PF03575 Peptidase family S51 GPY28_RS05755 PF03466 LysR substrate binding domain GPY28_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS05760 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS05770 PF13718 GNAT acetyltransferase 2 GPY28_RS05770 PF05127 Helicase GPY28_RS05775 PF02195 ParB-like nuclease domain GPY28_RS05775 PF08775 ParB family GPY28_RS05780 PF13614 AAA domain GPY28_RS05780 PF18607 ParA helix turn helix domain GPY28_RS05795 PF00005 ABC transporter GPY28_RS05795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS05800 PF00005 ABC transporter GPY28_RS05800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS05810 PF08719 Domain of unknown function (DUF1768) GPY28_RS05810 PF00925 GTP cyclohydrolase II GPY28_RS05820 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS05820 PF00072 Response regulator receiver domain GPY28_RS05820 PF17149 Periplasmic sensor domain found in signal transduction proteins GPY28_RS05820 PF01627 Hpt domain GPY28_RS05820 PF00672 HAMP domain GPY28_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS05830 PF01709 Transcriptional regulator GPY28_RS05835 PF01098 Cell cycle protein GPY28_RS05845 PF00005 ABC transporter GPY28_RS05865 PF07694 5TMR of 5TMR-LYT GPY28_RS05865 PF13492 GAF domain GPY28_RS05865 PF06580 Histidine kinase GPY28_RS05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS05870 PF00072 Response regulator receiver domain GPY28_RS05870 PF04397 LytTr DNA-binding domain GPY28_RS05880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY28_RS05885 PF00672 HAMP domain GPY28_RS05885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS05885 PF17200 Single Cache domain 2 GPY28_RS05900 PF03616 Sodium/glutamate symporter GPY28_RS05910 PF00005 ABC transporter GPY28_RS05915 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS05915 PF00155 Aminotransferase class I and II GPY28_RS05920 PF03616 Sodium/glutamate symporter GPY28_RS05930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY28_RS05945 PF03466 LysR substrate binding domain GPY28_RS05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS05950 PF17954 Quercetinase C-terminal cupin domain GPY28_RS05950 PF02678 Pirin GPY28_RS05955 PF07681 DoxX GPY28_RS05965 PF12833 Helix-turn-helix domain GPY28_RS05965 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GPY28_RS05965 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY28_RS05965 PF02805 Metal binding domain of Ada GPY28_RS05970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GPY28_RS05970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY28_RS05980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GPY28_RS05990 PF03600 Citrate transporter GPY28_RS06005 PF12697 Alpha/beta hydrolase family GPY28_RS06010 PF08329 Chitinase A, N-terminal domain GPY28_RS06010 PF00704 Glycosyl hydrolases family 18 GPY28_RS06020 PF06865 Pyrimidine/purine nucleoside phosphorylase GPY28_RS06030 PF00563 EAL domain GPY28_RS06030 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS06035 PF01554 MatE GPY28_RS06040 PF00849 RNA pseudouridylate synthase GPY28_RS06055 PF03466 LysR substrate binding domain GPY28_RS06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS06070 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS06070 PF17152 Periplasmic sensor domain GPY28_RS06080 PF00756 Putative esterase GPY28_RS06085 PF00107 Zinc-binding dehydrogenase GPY28_RS06085 PF08240 Alcohol dehydrogenase GroES-like domain GPY28_RS06090 PF00797 N-acetyltransferase GPY28_RS06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS06095 PF03466 LysR substrate binding domain GPY28_RS06100 PF08021 Siderophore-interacting FAD-binding domain GPY28_RS06100 PF04954 Siderophore-interacting protein GPY28_RS06105 PF01810 LysE type translocator GPY28_RS06110 PF01037 Lrp/AsnC ligand binding domain GPY28_RS06115 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GPY28_RS06115 PF18416 N-acetylglucosamine binding protein domain 2 GPY28_RS06130 PF13599 Pentapeptide repeats (9 copies) GPY28_RS06135 PF03922 OmpW family GPY28_RS06140 PF13533 Biotin-lipoyl like GPY28_RS06145 PF07690 Major Facilitator Superfamily GPY28_RS06155 PF12706 Beta-lactamase superfamily domain GPY28_RS06160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY28_RS06195 PF05651 Putative sugar diacid recognition GPY28_RS06195 PF13556 PucR C-terminal helix-turn-helix domain GPY28_RS06195 PF17853 GGDEF-like domain GPY28_RS06200 PF02447 GntP family permease GPY28_RS06205 PF02595 Glycerate kinase family GPY28_RS06210 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS06210 PF00155 Aminotransferase class I and II GPY28_RS06230 PF00583 Acetyltransferase (GNAT) family GPY28_RS06250 PF13302 Acetyltransferase (GNAT) domain GPY28_RS06255 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY28_RS06260 PF01568 Molydopterin dinucleotide binding domain GPY28_RS06260 PF18364 Molybdopterin oxidoreductase N-terminal domain GPY28_RS06260 PF00384 Molybdopterin oxidoreductase GPY28_RS06270 PF02581 Thiamine monophosphate synthase GPY28_RS06275 PF02110 Hydroxyethylthiazole kinase family GPY28_RS06280 PF03070 TENA/THI-4/PQQC family GPY28_RS06285 PF09084 NMT1/THI5 like GPY28_RS06290 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS06295 PF00005 ABC transporter GPY28_RS06300 PF08543 Phosphomethylpyrimidine kinase GPY28_RS06305 PF01523 Putative modulator of DNA gyrase GPY28_RS06310 PF01523 Putative modulator of DNA gyrase GPY28_RS06315 PF04013 Putative SAM-dependent RNA methyltransferase GPY28_RS06370 PF10928 Protein of unknown function (DUF2810) GPY28_RS06375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY28_RS06375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY28_RS06385 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY28_RS06390 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS06390 PF00072 Response regulator receiver domain GPY28_RS06395 PF16750 Sensor domain of 2-component histidine kinase GPY28_RS06395 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS06395 PF00672 HAMP domain GPY28_RS06400 PF00593 TonB dependent receptor GPY28_RS06400 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS06410 PF01618 MotA/TolQ/ExbB proton channel family GPY28_RS06415 PF01618 MotA/TolQ/ExbB proton channel family GPY28_RS06420 PF02472 Biopolymer transport protein ExbD/TolR GPY28_RS06465 PF01297 Zinc-uptake complex component A periplasmic GPY28_RS06470 PF00005 ABC transporter GPY28_RS06475 PF00950 ABC 3 transport family GPY28_RS06490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GPY28_RS06490 PF00326 Prolyl oligopeptidase family GPY28_RS06495 PF07690 Major Facilitator Superfamily GPY28_RS06500 PF00491 Arginase family GPY28_RS06505 PF17810 Arginine decarboxylase helical bundle domain GPY28_RS06505 PF17944 Arginine decarboxylase C-terminal helical extension GPY28_RS06505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY28_RS06510 PF00753 Metallo-beta-lactamase superfamily GPY28_RS06515 PF18030 RimK PreATP-grasp domain GPY28_RS06515 PF08443 RimK-like ATP-grasp domain GPY28_RS06520 PF18030 RimK PreATP-grasp domain GPY28_RS06520 PF08443 RimK-like ATP-grasp domain GPY28_RS06530 PF12706 Beta-lactamase superfamily domain GPY28_RS06540 PF03466 LysR substrate binding domain GPY28_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS06555 PF00232 Glycosyl hydrolase family 1 GPY28_RS06560 PF00072 Response regulator receiver domain GPY28_RS06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS06560 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS06560 PF08448 PAS fold GPY28_RS06560 PF13426 PAS domain GPY28_RS06565 PF02954 Bacterial regulatory protein, Fis family GPY28_RS06565 PF00158 Sigma-54 interaction domain GPY28_RS06565 PF00072 Response regulator receiver domain GPY28_RS06570 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS06575 PF05525 Branched-chain amino acid transport protein GPY28_RS06595 PF01266 FAD dependent oxidoreductase GPY28_RS06600 PF04229 GrpB protein GPY28_RS06615 PF02322 Cytochrome bd terminal oxidase subunit II GPY28_RS06620 PF01654 Cytochrome bd terminal oxidase subunit I GPY28_RS06625 PF03116 NQR2, RnfD, RnfE family GPY28_RS06630 PF01212 Beta-eliminating lyase GPY28_RS06645 PF01773 Na+ dependent nucleoside transporter N-terminus GPY28_RS06645 PF07662 Na+ dependent nucleoside transporter C-terminus GPY28_RS06645 PF07670 Nucleoside recognition GPY28_RS06660 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS06660 PF05230 MASE2 domain GPY28_RS06675 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS06680 PF00875 DNA photolyase GPY28_RS06680 PF03441 FAD binding domain of DNA photolyase GPY28_RS06685 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GPY28_RS06700 PF01641 SelR domain GPY28_RS06700 PF01625 Peptide methionine sulfoxide reductase GPY28_RS06705 PF02566 OsmC-like protein GPY28_RS06710 PF12464 Maltose acetyltransferase GPY28_RS06710 PF14602 Hexapeptide repeat of succinyl-transferase GPY28_RS06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS06730 PF03466 LysR substrate binding domain GPY28_RS06735 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS06750 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GPY28_RS06755 PF00194 Eukaryotic-type carbonic anhydrase GPY28_RS06760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY28_RS06765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS06770 PF00005 ABC transporter GPY28_RS06770 PF02687 FtsX-like permease family GPY28_RS06770 PF12704 MacB-like periplasmic core domain GPY28_RS06775 PF02321 Outer membrane efflux protein GPY28_RS06785 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS06790 PF00657 GDSL-like Lipase/Acylhydrolase GPY28_RS06805 PF03611 PTS system sugar-specific permease component GPY28_RS06815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY28_RS06820 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS06825 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS06835 PF00266 Aminotransferase class-V GPY28_RS06845 PF00005 ABC transporter GPY28_RS06850 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS06855 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS06855 PF07702 UTRA domain GPY28_RS06870 PF04393 Protein of unknown function (DUF535) GPY28_RS06880 PF01266 FAD dependent oxidoreductase GPY28_RS06885 PF18027 Cytosolic carboxypeptidase N-terminal domain GPY28_RS06885 PF00246 Zinc carboxypeptidase GPY28_RS06890 PF00691 OmpA family GPY28_RS06890 PF01389 OmpA-like transmembrane domain GPY28_RS06895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS06895 PF03466 LysR substrate binding domain GPY28_RS06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS06900 PF03466 LysR substrate binding domain GPY28_RS06910 PF03315 Serine dehydratase beta chain GPY28_RS06910 PF03313 Serine dehydratase alpha chain GPY28_RS06930 PF08264 Anticodon-binding domain of tRNA GPY28_RS06930 PF00133 tRNA synthetases class I (I, L, M and V) GPY28_RS06935 PF01464 Transglycosylase SLT domain GPY28_RS06935 PF01476 LysM domain GPY28_RS06955 PF00460 Flagella basal body rod protein GPY28_RS06960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS06960 PF00460 Flagella basal body rod protein GPY28_RS06965 PF13860 FlgD Ig-like domain GPY28_RS06965 PF03963 Flagellar hook capping protein - N-terminal region GPY28_RS06965 PF13861 FlgD Tudor-like domain GPY28_RS06970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS06970 PF00460 Flagella basal body rod protein GPY28_RS06970 PF07559 Flagellar basal body protein FlaE GPY28_RS06975 PF00460 Flagella basal body rod protein GPY28_RS06975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS06980 PF00460 Flagella basal body rod protein GPY28_RS06980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS06985 PF02107 Flagellar L-ring protein GPY28_RS06990 PF02119 Flagellar P-ring protein GPY28_RS06995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GPY28_RS06995 PF10135 Rod binding protein GPY28_RS07000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS07000 PF00460 Flagella basal body rod protein GPY28_RS07005 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS07025 PF01070 FMN-dependent dehydrogenase GPY28_RS07040 PF00581 Rhodanese-like domain GPY28_RS07050 PF00166 Chaperonin 10 Kd subunit GPY28_RS07055 PF00118 TCP-1/cpn60 chaperonin family GPY28_RS07065 PF01810 LysE type translocator GPY28_RS07070 PF03466 LysR substrate binding domain GPY28_RS07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07085 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS07085 PF08359 YsiA-like protein, C-terminal region GPY28_RS07090 PF12833 Helix-turn-helix domain GPY28_RS07095 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GPY28_RS07100 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GPY28_RS07105 PF13520 Amino acid permease GPY28_RS07110 PF03060 Nitronate monooxygenase GPY28_RS07115 PF01625 Peptide methionine sulfoxide reductase GPY28_RS07115 PF01641 SelR domain GPY28_RS07120 PF00455 DeoR C terminal sensor domain GPY28_RS07120 PF08220 DeoR-like helix-turn-helix domain GPY28_RS07135 PF00857 Isochorismatase family GPY28_RS07145 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GPY28_RS07145 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GPY28_RS07170 PF03466 LysR substrate binding domain GPY28_RS07170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07185 PF06629 MltA-interacting protein MipA GPY28_RS07190 PF04170 NlpE N-terminal domain GPY28_RS07190 PF17185 NlpE C-terminal OB domain GPY28_RS07195 PF00005 ABC transporter GPY28_RS07195 PF00571 CBS domain GPY28_RS07200 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS07205 PF02001 Protein of unknown function DUF134 GPY28_RS07230 PF03764 Elongation factor G, domain IV GPY28_RS07230 PF14492 Elongation Factor G, domain II GPY28_RS07230 PF00679 Elongation factor G C-terminus GPY28_RS07230 PF03144 Elongation factor Tu domain 2 GPY28_RS07230 PF00009 Elongation factor Tu GTP binding domain GPY28_RS07240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GPY28_RS07240 PF13378 Enolase C-terminal domain-like GPY28_RS07250 PF03466 LysR substrate binding domain GPY28_RS07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07265 PF09278 MerR, DNA binding GPY28_RS07265 PF00376 MerR family regulatory protein GPY28_RS07285 PF00398 Ribosomal RNA adenine dimethylase GPY28_RS07290 PF13091 PLD-like domain GPY28_RS07295 PF13533 Biotin-lipoyl like GPY28_RS07300 PF00873 AcrB/AcrD/AcrF family GPY28_RS07320 PF00873 AcrB/AcrD/AcrF family GPY28_RS07340 PF00005 ABC transporter GPY28_RS07340 PF08402 TOBE domain GPY28_RS07365 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS07365 PF07702 UTRA domain GPY28_RS07370 PF02028 BCCT, betaine/carnitine/choline family transporter GPY28_RS07375 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 GPY28_RS07375 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GPY28_RS07375 PF02837 Glycosyl hydrolases family 2, sugar binding domain GPY28_RS07375 PF00703 Glycosyl hydrolases family 2 GPY28_RS07390 PF13416 Bacterial extracellular solute-binding protein GPY28_RS07395 PF00579 tRNA synthetases class I (W and Y) GPY28_RS07400 PF00072 Response regulator receiver domain GPY28_RS07400 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS07410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GPY28_RS07410 PF02896 PEP-utilising enzyme, TIM barrel domain GPY28_RS07410 PF00391 PEP-utilising enzyme, mobile domain GPY28_RS07415 PF03618 Kinase/pyrophosphorylase GPY28_RS07420 PF17763 Glutaminase/Asparaginase C-terminal domain GPY28_RS07420 PF00710 Asparaginase, N-terminal GPY28_RS07430 PF03466 LysR substrate binding domain GPY28_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07445 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GPY28_RS07450 PF00202 Aminotransferase class-III GPY28_RS07455 PF00171 Aldehyde dehydrogenase family GPY28_RS07460 PF01037 Lrp/AsnC ligand binding domain GPY28_RS07465 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GPY28_RS07470 PF00557 Metallopeptidase family M24 GPY28_RS07470 PF01321 Creatinase/Prolidase N-terminal domain GPY28_RS07475 PF00155 Aminotransferase class I and II GPY28_RS07475 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS07495 PF00107 Zinc-binding dehydrogenase GPY28_RS07495 PF08240 Alcohol dehydrogenase GroES-like domain GPY28_RS07500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY28_RS07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07510 PF03466 LysR substrate binding domain GPY28_RS07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07515 PF03466 LysR substrate binding domain GPY28_RS07525 PF00270 DEAD/DEAH box helicase GPY28_RS07525 PF00271 Helicase conserved C-terminal domain GPY28_RS07535 PF00535 Glycosyl transferase family 2 GPY28_RS07565 PF00155 Aminotransferase class I and II GPY28_RS07570 PF01497 Periplasmic binding protein GPY28_RS07570 PF12833 Helix-turn-helix domain GPY28_RS07575 PF03466 LysR substrate binding domain GPY28_RS07575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07625 PF11471 Maltoporin periplasmic N-terminal extension GPY28_RS07625 PF02264 LamB porin GPY28_RS07630 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS07635 PF02378 Phosphotransferase system, EIIC GPY28_RS07635 PF00367 phosphotransferase system, EIIB GPY28_RS07640 PF00294 pfkB family carbohydrate kinase GPY28_RS07645 PF08244 Glycosyl hydrolases family 32 C terminal GPY28_RS07645 PF00251 Glycosyl hydrolases family 32 N-terminal domain GPY28_RS07655 PF02798 Glutathione S-transferase, N-terminal domain GPY28_RS07660 PF07943 Penicillin-binding protein 5, C-terminal domain GPY28_RS07660 PF00768 D-alanyl-D-alanine carboxypeptidase GPY28_RS07670 PF08534 Redoxin GPY28_RS07670 PF00462 Glutaredoxin GPY28_RS07675 PF00962 Adenosine/AMP deaminase GPY28_RS07690 PF00313 'Cold-shock' DNA-binding domain GPY28_RS07695 PF02678 Pirin GPY28_RS07695 PF05726 Pirin C-terminal cupin domain GPY28_RS07700 PF01734 Patatin-like phospholipase GPY28_RS07715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY28_RS07720 PF08019 Phosphoethanolamine transferase EptA/EptB GPY28_RS07720 PF00884 Sulfatase GPY28_RS07725 PF01219 Prokaryotic diacylglycerol kinase GPY28_RS07735 PF16527 Two-component sensor protein CpxA, periplasmic domain GPY28_RS07735 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS07735 PF00672 HAMP domain GPY28_RS07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS07740 PF00072 Response regulator receiver domain GPY28_RS07740 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS07755 PF01323 DSBA-like thioredoxin domain GPY28_RS07770 PF00255 Glutathione peroxidase GPY28_RS07775 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY28_RS07785 PF07690 Major Facilitator Superfamily GPY28_RS07800 PF01966 HD domain GPY28_RS07805 PF07969 Amidohydrolase family GPY28_RS07810 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GPY28_RS07815 PF01769 Divalent cation transporter GPY28_RS07815 PF00571 CBS domain GPY28_RS07815 PF03448 MgtE intracellular N domain GPY28_RS07820 PF03109 ABC1 family GPY28_RS07825 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS07825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS07835 PF12833 Helix-turn-helix domain GPY28_RS07835 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GPY28_RS07850 PF00072 Response regulator receiver domain GPY28_RS07850 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS07855 PF16527 Two-component sensor protein CpxA, periplasmic domain GPY28_RS07855 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS07855 PF00672 HAMP domain GPY28_RS07865 PF00155 Aminotransferase class I and II GPY28_RS07865 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS07870 PF13520 Amino acid permease GPY28_RS07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS07885 PF03466 LysR substrate binding domain GPY28_RS07905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY28_RS07905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY28_RS07910 PF00072 Response regulator receiver domain GPY28_RS07910 PF00672 HAMP domain GPY28_RS07910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS07910 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS07910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY28_RS07910 PF01627 Hpt domain GPY28_RS07915 PF01554 MatE GPY28_RS07920 PF04363 Protein of unknown function (DUF496) GPY28_RS07930 PF04337 Protein of unknown function, DUF480 GPY28_RS07935 PF01541 GIY-YIG catalytic domain GPY28_RS07940 PF13407 Periplasmic binding protein domain GPY28_RS07945 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS07945 PF09308 LuxQ, periplasmic GPY28_RS07945 PF00072 Response regulator receiver domain GPY28_RS07950 PF01047 MarR family GPY28_RS07955 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS07955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS07975 PF01037 Lrp/AsnC ligand binding domain GPY28_RS08000 PF07549 SecD/SecF GG Motif GPY28_RS08000 PF02355 Protein export membrane protein GPY28_RS08000 PF13721 SecD export protein N-terminal TM region GPY28_RS08005 PF02355 Protein export membrane protein GPY28_RS08005 PF07549 SecD/SecF GG Motif GPY28_RS08015 PF01810 LysE type translocator GPY28_RS08020 PF00106 short chain dehydrogenase GPY28_RS08025 PF00108 Thiolase, N-terminal domain GPY28_RS08025 PF02803 Thiolase, C-terminal domain GPY28_RS08035 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GPY28_RS08045 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY28_RS08050 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GPY28_RS08055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY28_RS08055 PF00384 Molybdopterin oxidoreductase GPY28_RS08055 PF01568 Molydopterin dinucleotide binding domain GPY28_RS08065 PF13187 4Fe-4S dicluster domain GPY28_RS08065 PF12838 4Fe-4S dicluster domain GPY28_RS08070 PF00672 HAMP domain GPY28_RS08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS08070 PF07730 Histidine kinase GPY28_RS08070 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GPY28_RS08075 PF00072 Response regulator receiver domain GPY28_RS08075 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS08090 PF07687 Peptidase dimerisation domain GPY28_RS08090 PF01546 Peptidase family M20/M25/M40 GPY28_RS08095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY28_RS08100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS08105 PF00873 AcrB/AcrD/AcrF family GPY28_RS08110 PF00672 HAMP domain GPY28_RS08110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS08110 PF12729 Four helix bundle sensory module for signal transduction GPY28_RS08115 PF00472 RF-1 domain GPY28_RS08120 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS08125 PF01389 OmpA-like transmembrane domain GPY28_RS08125 PF00691 OmpA family GPY28_RS08130 PF00793 DAHP synthetase I family GPY28_RS08135 PF07690 Major Facilitator Superfamily GPY28_RS08140 PF12729 Four helix bundle sensory module for signal transduction GPY28_RS08140 PF00672 HAMP domain GPY28_RS08140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS08145 PF02780 Transketolase, C-terminal domain GPY28_RS08145 PF00456 Transketolase, thiamine diphosphate binding domain GPY28_RS08145 PF02779 Transketolase, pyrimidine binding domain GPY28_RS08150 PF00923 Transaldolase/Fructose-6-phosphate aldolase GPY28_RS08165 PF00581 Rhodanese-like domain GPY28_RS08180 PF00899 ThiF family GPY28_RS08185 PF03453 MoeA N-terminal region (domain I and II) GPY28_RS08185 PF00994 Probable molybdopterin binding domain GPY28_RS08185 PF03454 MoeA C-terminal region (domain IV) GPY28_RS08190 PF01227 GTP cyclohydrolase I GPY28_RS08200 PF00654 Voltage gated chloride channel GPY28_RS08215 PF00248 Aldo/keto reductase family GPY28_RS08220 PF00072 Response regulator receiver domain GPY28_RS08230 PF03853 YjeF-related protein N-terminus GPY28_RS08230 PF01256 Carbohydrate kinase GPY28_RS08235 PF00478 IMP dehydrogenase / GMP reductase domain GPY28_RS08255 PF17678 Glycosyl hydrolase family 92 N-terminal domain GPY28_RS08255 PF07971 Glycosyl hydrolase family 92 GPY28_RS08265 PF07971 Glycosyl hydrolase family 92 GPY28_RS08265 PF17678 Glycosyl hydrolase family 92 N-terminal domain GPY28_RS08270 PF17678 Glycosyl hydrolase family 92 N-terminal domain GPY28_RS08270 PF07971 Glycosyl hydrolase family 92 GPY28_RS08285 PF01238 Phosphomannose isomerase type I GPY28_RS08290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY28_RS08290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY28_RS08295 PF12833 Helix-turn-helix domain GPY28_RS08305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY28_RS08335 PF08525 Opacity-associated protein A N-terminal motif GPY28_RS08335 PF01551 Peptidase family M23 GPY28_RS08335 PF01476 LysM domain GPY28_RS08360 PF02954 Bacterial regulatory protein, Fis family GPY28_RS08360 PF00158 Sigma-54 interaction domain GPY28_RS08360 PF00072 Response regulator receiver domain GPY28_RS08365 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS08365 PF07724 AAA domain (Cdc48 subfamily) GPY28_RS08365 PF17871 AAA lid domain GPY28_RS08365 PF10431 C-terminal, D2-small domain, of ClpB protein GPY28_RS08370 PF05638 Type VI secretion system effector, Hcp GPY28_RS08375 PF04717 Type VI secretion system, phage-baseplate injector GPY28_RS08400 PF00069 Protein kinase domain GPY28_RS08435 PF01037 Lrp/AsnC ligand binding domain GPY28_RS08500 PF01797 Transposase IS200 like GPY28_RS08505 PF07690 Major Facilitator Superfamily GPY28_RS08515 PF03466 LysR substrate binding domain GPY28_RS08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS08520 PF00106 short chain dehydrogenase GPY28_RS08525 PF00582 Universal stress protein family GPY28_RS08535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GPY28_RS08535 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GPY28_RS08535 PF00361 Proton-conducting membrane transporter GPY28_RS08535 PF13244 Domain of unknown function (DUF4040) GPY28_RS08540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GPY28_RS08555 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GPY28_RS08560 PF03334 Na+/H+ antiporter subunit GPY28_RS08565 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS08565 PF07702 UTRA domain GPY28_RS08570 PF11975 Family 4 glycosyl hydrolase C-terminal domain GPY28_RS08570 PF02056 Family 4 glycosyl hydrolase GPY28_RS08575 PF00367 phosphotransferase system, EIIB GPY28_RS08575 PF02378 Phosphotransferase system, EIIC GPY28_RS08580 PF13193 AMP-binding enzyme C-terminal domain GPY28_RS08580 PF00501 AMP-binding enzyme GPY28_RS08585 PF00766 Electron transfer flavoprotein FAD-binding domain GPY28_RS08585 PF01012 Electron transfer flavoprotein domain GPY28_RS08590 PF01012 Electron transfer flavoprotein domain GPY28_RS08605 PF12399 Branched-chain amino acid ATP-binding cassette transporter GPY28_RS08605 PF00005 ABC transporter GPY28_RS08610 PF00501 AMP-binding enzyme GPY28_RS08630 PF00005 ABC transporter GPY28_RS08635 PF14535 AMP-binding enzyme C-terminal domain GPY28_RS08635 PF00501 AMP-binding enzyme GPY28_RS08640 PF05724 Thiopurine S-methyltransferase (TPMT) GPY28_RS08645 PF00106 short chain dehydrogenase GPY28_RS08650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY28_RS08650 PF00205 Thiamine pyrophosphate enzyme, central domain GPY28_RS08650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY28_RS08655 PF03306 Alpha-acetolactate decarboxylase GPY28_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS08660 PF03466 LysR substrate binding domain GPY28_RS08665 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS08680 PF02322 Cytochrome bd terminal oxidase subunit II GPY28_RS08685 PF01654 Cytochrome bd terminal oxidase subunit I GPY28_RS08690 PF00155 Aminotransferase class I and II GPY28_RS08690 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS08695 PF14602 Hexapeptide repeat of succinyl-transferase GPY28_RS08695 PF12464 Maltose acetyltransferase GPY28_RS08705 PF12795 Mechanosensitive ion channel porin domain GPY28_RS08705 PF12794 Mechanosensitive ion channel inner membrane domain 1 GPY28_RS08705 PF00924 Mechanosensitive ion channel GPY28_RS08715 PF00682 HMGL-like GPY28_RS08720 PF00364 Biotin-requiring enzyme GPY28_RS08720 PF00289 Biotin carboxylase, N-terminal domain GPY28_RS08720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY28_RS08720 PF02785 Biotin carboxylase C-terminal domain GPY28_RS08725 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS08730 PF01039 Carboxyl transferase domain GPY28_RS08735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY28_RS08735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY28_RS08735 PF02770 Acyl-CoA dehydrogenase, middle domain GPY28_RS08740 PF00376 MerR family regulatory protein GPY28_RS08740 PF09278 MerR, DNA binding GPY28_RS08745 PF02803 Thiolase, C-terminal domain GPY28_RS08745 PF00108 Thiolase, N-terminal domain GPY28_RS08750 PF00171 Aldehyde dehydrogenase family GPY28_RS08755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY28_RS08755 PF02770 Acyl-CoA dehydrogenase, middle domain GPY28_RS08755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY28_RS08760 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS08770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY28_RS08770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY28_RS08780 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS08780 PF00072 Response regulator receiver domain GPY28_RS08785 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS08785 PF13977 BetI-type transcriptional repressor, C-terminal GPY28_RS08790 PF00171 Aldehyde dehydrogenase family GPY28_RS08795 PF05199 GMC oxidoreductase GPY28_RS08795 PF00732 GMC oxidoreductase GPY28_RS08800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GPY28_RS08805 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS08810 PF00571 CBS domain GPY28_RS08810 PF00005 ABC transporter GPY28_RS08815 PF00881 Nitroreductase family GPY28_RS08825 PF01145 SPFH domain / Band 7 family GPY28_RS08825 PF16200 C-terminal region of band_7 GPY28_RS08835 PF00034 Cytochrome c GPY28_RS08835 PF03150 Di-haem cytochrome c peroxidase GPY28_RS08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS08840 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS08840 PF09308 LuxQ, periplasmic GPY28_RS08840 PF00072 Response regulator receiver domain GPY28_RS08850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GPY28_RS08850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GPY28_RS08860 PF04116 Fatty acid hydroxylase superfamily GPY28_RS08905 PF00563 EAL domain GPY28_RS08905 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS08910 PF05025 RbsD / FucU transport protein family GPY28_RS08915 PF00005 ABC transporter GPY28_RS08920 PF02653 Branched-chain amino acid transport system / permease component GPY28_RS08925 PF13407 Periplasmic binding protein domain GPY28_RS08930 PF00294 pfkB family carbohydrate kinase GPY28_RS08935 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS08945 PF04973 Nicotinamide mononucleotide transporter GPY28_RS08950 PF01048 Phosphorylase superfamily GPY28_RS08955 PF01797 Transposase IS200 like GPY28_RS08965 PF01497 Periplasmic binding protein GPY28_RS08970 PF01032 FecCD transport family GPY28_RS08975 PF01032 FecCD transport family GPY28_RS08980 PF00005 ABC transporter GPY28_RS08985 PF13411 MerR HTH family regulatory protein GPY28_RS08995 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS08995 PF00593 TonB dependent receptor GPY28_RS09025 PF12805 FUSC-like inner membrane protein yccS GPY28_RS09030 PF13361 UvrD-like helicase C-terminal domain GPY28_RS09030 PF00580 UvrD/REP helicase N-terminal domain GPY28_RS09030 PF12462 DNA helicase IV / RNA helicase N terminal GPY28_RS09035 PF02142 MGS-like domain GPY28_RS09040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY28_RS09045 PF00672 HAMP domain GPY28_RS09045 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS09045 PF01627 Hpt domain GPY28_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS09045 PF00072 Response regulator receiver domain GPY28_RS09060 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS09060 PF00072 Response regulator receiver domain GPY28_RS09065 PF00884 Sulfatase GPY28_RS09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS09070 PF03466 LysR substrate binding domain GPY28_RS09080 PF00696 Amino acid kinase family GPY28_RS09085 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY28_RS09085 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY28_RS09090 PF07687 Peptidase dimerisation domain GPY28_RS09090 PF01546 Peptidase family M20/M25/M40 GPY28_RS09095 PF00311 Phosphoenolpyruvate carboxylase GPY28_RS09105 PF02219 Methylenetetrahydrofolate reductase GPY28_RS09110 PF03447 Homoserine dehydrogenase, NAD binding domain GPY28_RS09110 PF00742 Homoserine dehydrogenase GPY28_RS09110 PF00696 Amino acid kinase family GPY28_RS09115 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY28_RS09125 PF00390 Malic enzyme, N-terminal domain GPY28_RS09125 PF03949 Malic enzyme, NAD binding domain GPY28_RS09130 PF00210 Ferritin-like domain GPY28_RS09135 PF04324 BFD-like [2Fe-2S] binding domain GPY28_RS09140 PF03143 Elongation factor Tu C-terminal domain GPY28_RS09140 PF00009 Elongation factor Tu GTP binding domain GPY28_RS09140 PF03144 Elongation factor Tu domain 2 GPY28_RS09145 PF14492 Elongation Factor G, domain II GPY28_RS09145 PF00679 Elongation factor G C-terminus GPY28_RS09145 PF03144 Elongation factor Tu domain 2 GPY28_RS09145 PF00009 Elongation factor Tu GTP binding domain GPY28_RS09145 PF03764 Elongation factor G, domain IV GPY28_RS09150 PF00177 Ribosomal protein S7p/S5e GPY28_RS09155 PF00164 Ribosomal protein S12/S23 GPY28_RS09160 PF04077 DsrH like protein GPY28_RS09165 PF02635 DsrE/DsrF-like family GPY28_RS09170 PF02635 DsrE/DsrF-like family GPY28_RS09175 PF08348 YheO-like PAS domain GPY28_RS09175 PF13309 HTH domain GPY28_RS09180 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY28_RS09180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY28_RS09190 PF04102 SlyX GPY28_RS09195 PF01112 Asparaginase GPY28_RS09205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY28_RS09215 PF02254 TrkA-N domain GPY28_RS09215 PF00999 Sodium/hydrogen exchanger family GPY28_RS09220 PF02525 Flavodoxin-like fold GPY28_RS09225 PF00005 ABC transporter GPY28_RS09225 PF12848 ABC transporter GPY28_RS09235 PF00561 alpha/beta hydrolase fold GPY28_RS09240 PF06794 Uncharacterised protein family (UPF0270) GPY28_RS09245 PF00485 Phosphoribulokinase / Uridine kinase family GPY28_RS09250 PF00027 Cyclic nucleotide-binding domain GPY28_RS09250 PF13545 Crp-like helix-turn-helix domain GPY28_RS09260 PF00171 Aldehyde dehydrogenase family GPY28_RS09265 PF04958 Arginine N-succinyltransferase beta subunit GPY28_RS09270 PF00202 Aminotransferase class-III GPY28_RS09275 PF00117 Glutamine amidotransferase class-I GPY28_RS09280 PF01047 MarR family GPY28_RS09285 PF00892 EamA-like transporter family GPY28_RS09295 PF01546 Peptidase family M20/M25/M40 GPY28_RS09295 PF07687 Peptidase dimerisation domain GPY28_RS09300 PF03806 AbgT putative transporter family GPY28_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS09305 PF03466 LysR substrate binding domain GPY28_RS09320 PF00579 tRNA synthetases class I (W and Y) GPY28_RS09325 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS09330 PF00588 SpoU rRNA Methylase family GPY28_RS09330 PF08032 RNA 2'-O ribose methyltransferase substrate binding GPY28_RS09335 PF00773 RNB domain GPY28_RS09335 PF17876 Cold shock domain GPY28_RS09335 PF08461 Ribonuclease R winged-helix domain GPY28_RS09335 PF08206 Ribonuclease B OB domain GPY28_RS09335 PF00575 S1 RNA binding domain GPY28_RS09340 PF02082 Transcriptional regulator GPY28_RS09345 PF00042 Globin GPY28_RS09345 PF00970 Oxidoreductase FAD-binding domain GPY28_RS09345 PF00175 Oxidoreductase NAD-binding domain GPY28_RS09350 PF08238 Sel1 repeat GPY28_RS09360 PF00709 Adenylosuccinate synthetase GPY28_RS09365 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GPY28_RS09370 PF01145 SPFH domain / Band 7 family GPY28_RS09375 PF12221 Bacterial membrane protein N terminal GPY28_RS09375 PF01145 SPFH domain / Band 7 family GPY28_RS09380 PF16360 GTP-binding GTPase Middle Region GPY28_RS09380 PF01926 50S ribosome-binding GTPase GPY28_RS09380 PF13167 GTP-binding GTPase N-terminal GPY28_RS09385 PF17209 Hfq protein GPY28_RS09395 PF01119 DNA mismatch repair protein, C-terminal domain GPY28_RS09395 PF08676 MutL C terminal dimerisation domain GPY28_RS09400 PF01520 N-acetylmuramoyl-L-alanine amidase GPY28_RS09405 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GPY28_RS09410 PF08331 Domain of unknown function (DUF1730) GPY28_RS09475 PF00929 Exonuclease GPY28_RS09480 PF03193 RsgA GTPase GPY28_RS09485 PF02666 Phosphatidylserine decarboxylase GPY28_RS09490 PF02080 TrkA-C domain GPY28_RS09490 PF03600 Citrate transporter GPY28_RS09500 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GPY28_RS09500 PF01676 Metalloenzyme superfamily GPY28_RS09505 PF00581 Rhodanese-like domain GPY28_RS09510 PF02556 Preprotein translocase subunit SecB GPY28_RS09515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GPY28_RS09515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GPY28_RS09520 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS09520 PF06426 Serine acetyltransferase, N-terminal GPY28_RS09525 PF01551 Peptidase family M23 GPY28_RS09535 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS09535 PF08360 QacR-like protein, C-terminal region GPY28_RS09545 PF00152 tRNA synthetases class II (D, K and N) GPY28_RS09550 PF00890 FAD binding domain GPY28_RS09550 PF02910 Fumarate reductase flavoprotein C-term GPY28_RS09555 PF13183 4Fe-4S dicluster domain GPY28_RS09555 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY28_RS09560 PF02300 Fumarate reductase subunit C GPY28_RS09565 PF02313 Fumarate reductase subunit D GPY28_RS09575 PF08207 Elongation factor P (EF-P) KOW-like domain GPY28_RS09575 PF01132 Elongation factor P (EF-P) OB domain GPY28_RS09575 PF09285 Elongation factor P, C-terminal GPY28_RS09580 PF04055 Radical SAM superfamily GPY28_RS09585 PF02308 MgtC family GPY28_RS09595 PF00118 TCP-1/cpn60 chaperonin family GPY28_RS09600 PF00166 Chaperonin 10 Kd subunit GPY28_RS09605 PF01554 MatE GPY28_RS09610 PF00365 Phosphofructokinase GPY28_RS09615 PF16916 Dimerisation domain of Zinc Transporter GPY28_RS09615 PF01545 Cation efflux family GPY28_RS09620 PF07813 LTXXQ motif family protein GPY28_RS09625 PF00072 Response regulator receiver domain GPY28_RS09625 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS09630 PF16527 Two-component sensor protein CpxA, periplasmic domain GPY28_RS09630 PF00672 HAMP domain GPY28_RS09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS09630 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS09635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GPY28_RS09635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GPY28_RS09640 PF00588 SpoU rRNA Methylase family GPY28_RS09645 PF04186 FxsA cytoplasmic membrane protein GPY28_RS09650 PF00206 Lyase GPY28_RS09650 PF10415 Fumarase C C-terminus GPY28_RS09655 PF03605 Anaerobic c4-dicarboxylate membrane transporter GPY28_RS09660 PF11412 Disulphide bond corrector protein DsbC GPY28_RS09660 PF02683 Cytochrome C biogenesis protein transmembrane region GPY28_RS09665 PF00072 Response regulator receiver domain GPY28_RS09665 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS09670 PF03471 Transporter associated domain GPY28_RS09670 PF00999 Sodium/hydrogen exchanger family GPY28_RS09670 PF02080 TrkA-C domain GPY28_RS09680 PF00474 Sodium:solute symporter family GPY28_RS09695 PF00206 Lyase GPY28_RS09695 PF10415 Fumarase C C-terminus GPY28_RS09700 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS09700 PF09308 LuxQ, periplasmic GPY28_RS09700 PF00072 Response regulator receiver domain GPY28_RS09700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS09705 PF12832 MFS_1 like family GPY28_RS09720 PF00501 AMP-binding enzyme GPY28_RS09720 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY28_RS09720 PF13193 AMP-binding enzyme C-terminal domain GPY28_RS09725 PF01220 Dehydroquinase class II GPY28_RS09730 PF00364 Biotin-requiring enzyme GPY28_RS09735 PF00289 Biotin carboxylase, N-terminal domain GPY28_RS09735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY28_RS09735 PF02785 Biotin carboxylase C-terminal domain GPY28_RS09745 PF01207 Dihydrouridine synthase (Dus) GPY28_RS09750 PF02954 Bacterial regulatory protein, Fis family GPY28_RS09760 PF00005 ABC transporter GPY28_RS09760 PF12848 ABC transporter GPY28_RS09810 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GPY28_RS09810 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GPY28_RS09810 PF01276 Orn/Lys/Arg decarboxylase, major domain GPY28_RS09815 PF13520 Amino acid permease GPY28_RS09825 PF18500 CadC C-terminal domain 1 GPY28_RS09825 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS09830 PF13411 MerR HTH family regulatory protein GPY28_RS09840 PF02142 MGS-like domain GPY28_RS09840 PF01808 AICARFT/IMPCHase bienzyme GPY28_RS09845 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GPY28_RS09845 PF02843 Phosphoribosylglycinamide synthetase, C domain GPY28_RS09845 PF02844 Phosphoribosylglycinamide synthetase, N domain GPY28_RS09855 PF00216 Bacterial DNA-binding protein GPY28_RS09860 PF00571 CBS domain GPY28_RS09860 PF01595 Cyclin M transmembrane N-terminal domain GPY28_RS09865 PF04222 Protein of unknown function (DUF416) GPY28_RS09870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY28_RS09875 PF03167 Uracil DNA glycosylase superfamily GPY28_RS09880 PF01208 Uroporphyrinogen decarboxylase (URO-D) GPY28_RS09885 PF09297 NADH pyrophosphatase zinc ribbon domain GPY28_RS09885 PF00293 NUDIX domain GPY28_RS09890 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GPY28_RS09895 PF00623 RNA polymerase Rpb1, domain 2 GPY28_RS09895 PF04998 RNA polymerase Rpb1, domain 5 GPY28_RS09895 PF04983 RNA polymerase Rpb1, domain 3 GPY28_RS09895 PF05000 RNA polymerase Rpb1, domain 4 GPY28_RS09895 PF04997 RNA polymerase Rpb1, domain 1 GPY28_RS09900 PF04561 RNA polymerase Rpb2, domain 2 GPY28_RS09900 PF00562 RNA polymerase Rpb2, domain 6 GPY28_RS09900 PF04563 RNA polymerase beta subunit GPY28_RS09900 PF04565 RNA polymerase Rpb2, domain 3 GPY28_RS09900 PF10385 RNA polymerase beta subunit external 1 domain GPY28_RS09900 PF04560 RNA polymerase Rpb2, domain 7 GPY28_RS09905 PF00542 Ribosomal protein L7/L12 C-terminal domain GPY28_RS09905 PF16320 Ribosomal protein L7/L12 dimerisation domain GPY28_RS09910 PF00466 Ribosomal protein L10 GPY28_RS09915 PF00687 Ribosomal protein L1p/L10e family GPY28_RS09920 PF00298 Ribosomal protein L11, RNA binding domain GPY28_RS09920 PF03946 Ribosomal protein L11, N-terminal domain GPY28_RS09925 PF00467 KOW motif GPY28_RS09925 PF02357 Transcription termination factor nusG GPY28_RS09930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GPY28_RS09940 PF03143 Elongation factor Tu C-terminal domain GPY28_RS09940 PF00009 Elongation factor Tu GTP binding domain GPY28_RS09940 PF03144 Elongation factor Tu domain 2 GPY28_RS09965 PF00485 Phosphoribulokinase / Uridine kinase family GPY28_RS09970 PF08279 HTH domain GPY28_RS09970 PF02237 Biotin protein ligase C terminal domain GPY28_RS09970 PF03099 Biotin/lipoate A/B protein ligase family GPY28_RS09975 PF01565 FAD binding domain GPY28_RS09975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GPY28_RS09985 PF13091 PLD-like domain GPY28_RS10050 PF01177 Asp/Glu/Hydantoin racemase GPY28_RS10060 PF01797 Transposase IS200 like GPY28_RS10065 PF00593 TonB dependent receptor GPY28_RS10065 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS10070 PF05958 tRNA (Uracil-5-)-methyltransferase GPY28_RS10080 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS10085 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS10085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY28_RS10090 PF01554 MatE GPY28_RS10095 PF04072 Leucine carboxyl methyltransferase GPY28_RS10100 PF00717 Peptidase S24-like GPY28_RS10100 PF01726 LexA DNA binding domain GPY28_RS10105 PF01553 Acyltransferase GPY28_RS10110 PF01040 UbiA prenyltransferase family GPY28_RS10115 PF04345 Chorismate lyase GPY28_RS10120 PF03748 Flagellar basal body-associated protein FliL GPY28_RS10125 PF01694 Rhomboid family GPY28_RS10125 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GPY28_RS10130 PF00581 Rhodanese-like domain GPY28_RS10135 PF04545 Sigma-70, region 4 GPY28_RS10135 PF00140 Sigma-70 factor, region 1.2 GPY28_RS10135 PF04542 Sigma-70 region 2 GPY28_RS10140 PF18075 FtsX extracellular domain GPY28_RS10145 PF00005 ABC transporter GPY28_RS10150 PF02881 SRP54-type protein, helical bundle domain GPY28_RS10150 PF00448 SRP54-type protein, GTPase domain GPY28_RS10165 PF01914 MarC family integral membrane protein GPY28_RS10185 PF10694 Protein of unknown function (DUF2500) GPY28_RS10205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY28_RS10205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY28_RS10210 PF01022 Bacterial regulatory protein, arsR family GPY28_RS10215 PF00563 EAL domain GPY28_RS10215 PF08668 HDOD domain GPY28_RS10220 PF01810 LysE type translocator GPY28_RS10225 PF12146 Serine aminopeptidase, S33 GPY28_RS10250 PF10442 FIST C domain GPY28_RS10250 PF08495 FIST N domain GPY28_RS10250 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS10250 PF00563 EAL domain GPY28_RS10255 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS10260 PF02899 Phage integrase, N-terminal SAM-like domain GPY28_RS10260 PF00589 Phage integrase family GPY28_RS10270 PF01678 Diaminopimelate epimerase GPY28_RS10275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY28_RS10275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GPY28_RS10285 PF01491 Frataxin-like domain GPY28_RS10290 PF12633 Adenylate cyclase NT domain GPY28_RS10290 PF01295 Adenylate cyclase, class-I GPY28_RS10295 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GPY28_RS10295 PF03900 Porphobilinogen deaminase, C-terminal domain GPY28_RS10300 PF02602 Uroporphyrinogen-III synthase HemD GPY28_RS10305 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GPY28_RS10310 PF07219 HemY protein N-terminus GPY28_RS10315 PF01797 Transposase IS200 like GPY28_RS10355 PF00175 Oxidoreductase NAD-binding domain GPY28_RS10360 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY28_RS10365 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GPY28_RS10375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY28_RS10375 PF07497 Rho termination factor, RNA-binding domain GPY28_RS10375 PF07498 Rho termination factor, N-terminal domain GPY28_RS10380 PF00085 Thioredoxin GPY28_RS10385 PF00271 Helicase conserved C-terminal domain GPY28_RS10385 PF00270 DEAD/DEAH box helicase GPY28_RS10390 PF02541 Ppx/GppA phosphatase family GPY28_RS10400 PF02592 Putative vitamin uptake transporter GPY28_RS10410 PF00270 DEAD/DEAH box helicase GPY28_RS10410 PF16124 RecQ zinc-binding GPY28_RS10410 PF09382 RQC domain GPY28_RS10410 PF00271 Helicase conserved C-terminal domain GPY28_RS10410 PF00570 HRDC domain GPY28_RS10415 PF00892 EamA-like transporter family GPY28_RS10425 PF01810 LysE type translocator GPY28_RS10440 PF01797 Transposase IS200 like GPY28_RS10445 PF00580 UvrD/REP helicase N-terminal domain GPY28_RS10445 PF13361 UvrD-like helicase C-terminal domain GPY28_RS10455 PF05114 Protein of unknown function (DUF692) GPY28_RS10475 PF07690 Major Facilitator Superfamily GPY28_RS10480 PF03466 LysR substrate binding domain GPY28_RS10480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS10485 PF00557 Metallopeptidase family M24 GPY28_RS10485 PF00557 Metallopeptidase family M24 GPY28_RS10485 PF01321 Creatinase/Prolidase N-terminal domain GPY28_RS10485 PF01321 Creatinase/Prolidase N-terminal domain GPY28_RS10490 PF06968 Biotin and Thiamin Synthesis associated domain GPY28_RS10490 PF04055 Radical SAM superfamily GPY28_RS10495 PF05690 Thiazole biosynthesis protein ThiG GPY28_RS10500 PF02597 ThiS family GPY28_RS10505 PF00899 ThiF family GPY28_RS10510 PF02581 Thiamine monophosphate synthase GPY28_RS10515 PF13667 ThiC-associated domain GPY28_RS10515 PF01964 Radical SAM ThiC family GPY28_RS10520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GPY28_RS10525 PF07732 Multicopper oxidase GPY28_RS10525 PF07731 Multicopper oxidase GPY28_RS10525 PF00394 Multicopper oxidase GPY28_RS10575 PF12724 Flavodoxin domain GPY28_RS10580 PF02386 Cation transport protein GPY28_RS10585 PF09186 Domain of unknown function (DUF1949) GPY28_RS10585 PF01205 Uncharacterized protein family UPF0029 GPY28_RS10590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY28_RS10590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY28_RS10590 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS10595 PF00108 Thiolase, N-terminal domain GPY28_RS10595 PF02803 Thiolase, C-terminal domain GPY28_RS10600 PF08240 Alcohol dehydrogenase GroES-like domain GPY28_RS10600 PF00107 Zinc-binding dehydrogenase GPY28_RS10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS10605 PF03466 LysR substrate binding domain GPY28_RS10615 PF01206 Sulfurtransferase TusA GPY28_RS10625 PF01169 Uncharacterized protein family UPF0016 GPY28_RS10630 PF02091 Glycyl-tRNA synthetase alpha subunit GPY28_RS10635 PF05746 DALR anticodon binding domain GPY28_RS10635 PF02092 Glycyl-tRNA synthetase beta subunit GPY28_RS10640 PF00128 Alpha amylase, catalytic domain GPY28_RS10645 PF00155 Aminotransferase class I and II GPY28_RS10650 PF00011 Hsp20/alpha crystallin family GPY28_RS10665 PF00986 DNA gyrase B subunit, carboxyl terminus GPY28_RS10665 PF18053 DNA gyrase B subunit insert domain GPY28_RS10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS10665 PF00204 DNA gyrase B GPY28_RS10665 PF01751 Toprim domain GPY28_RS10670 PF02463 RecF/RecN/SMC N terminal domain GPY28_RS10675 PF00712 DNA polymerase III beta subunit, N-terminal domain GPY28_RS10675 PF02767 DNA polymerase III beta subunit, central domain GPY28_RS10675 PF02768 DNA polymerase III beta subunit, C-terminal domain GPY28_RS10680 PF00308 Bacterial dnaA protein GPY28_RS10680 PF08299 Bacterial dnaA protein helix-turn-helix GPY28_RS10680 PF11638 DnaA N-terminal domain GPY28_RS10690 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS10700 PF00005 ABC transporter GPY28_RS10705 PF00468 Ribosomal protein L34 GPY28_RS10710 PF00825 Ribonuclease P GPY28_RS10715 PF01809 Putative membrane protein insertion efficiency factor GPY28_RS10720 PF14849 YidC periplasmic domain GPY28_RS10720 PF02096 60Kd inner membrane protein GPY28_RS10725 PF12631 MnmE helical domain GPY28_RS10725 PF10396 GTP-binding protein TrmE N-terminus GPY28_RS10725 PF01926 50S ribosome-binding GTPase GPY28_RS10730 PF00258 Flavodoxin GPY28_RS10735 PF13932 GidA associated domain GPY28_RS10735 PF01134 Glucose inhibited division protein A GPY28_RS10740 PF02527 rRNA small subunit methyltransferase G GPY28_RS10745 PF13614 AAA domain GPY28_RS10750 PF02195 ParB-like nuclease domain GPY28_RS10750 PF17762 HTH domain found in ParB protein GPY28_RS10755 PF03899 ATP synthase I chain GPY28_RS10760 PF00119 ATP synthase A chain GPY28_RS10765 PF00137 ATP synthase subunit C GPY28_RS10770 PF00430 ATP synthase B/B' CF(0) GPY28_RS10775 PF00213 ATP synthase delta (OSCP) subunit GPY28_RS10780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY28_RS10780 PF00306 ATP synthase alpha/beta chain, C terminal domain GPY28_RS10780 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY28_RS10785 PF00231 ATP synthase GPY28_RS10790 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY28_RS10790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY28_RS10795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GPY28_RS10795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GPY28_RS10800 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS10800 PF12804 MobA-like NTP transferase domain GPY28_RS10805 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS10810 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS10815 PF07690 Major Facilitator Superfamily GPY28_RS10820 PF03466 LysR substrate binding domain GPY28_RS10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS10825 PF00291 Pyridoxal-phosphate dependent enzyme GPY28_RS10825 PF00585 C-terminal regulatory domain of Threonine dehydratase GPY28_RS10830 PF00920 Dehydratase family GPY28_RS10835 PF01063 Amino-transferase class IV GPY28_RS10845 PF00205 Thiamine pyrophosphate enzyme, central domain GPY28_RS10845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY28_RS10845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY28_RS10850 PF01078 Magnesium chelatase, subunit ChlI GPY28_RS10850 PF13335 Magnesium chelatase, subunit ChlI C-terminal GPY28_RS10860 PF01553 Acyltransferase GPY28_RS10865 PF01323 DSBA-like thioredoxin domain GPY28_RS10870 PF01636 Phosphotransferase enzyme family GPY28_RS10875 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GPY28_RS10875 PF12801 4Fe-4S binding domain GPY28_RS10875 PF13746 4Fe-4S dicluster domain GPY28_RS10880 PF06288 Protein of unknown function (DUF1040) GPY28_RS10890 PF07070 SpoOM protein GPY28_RS10895 PF03006 Haemolysin-III related GPY28_RS10905 PF02386 Cation transport protein GPY28_RS10910 PF02254 TrkA-N domain GPY28_RS10910 PF02080 TrkA-C domain GPY28_RS10915 PF01189 16S rRNA methyltransferase RsmB/F GPY28_RS10915 PF01029 NusB family GPY28_RS10920 PF02911 Formyl transferase, C-terminal domain GPY28_RS10920 PF00551 Formyl transferase GPY28_RS10925 PF01327 Polypeptide deformylase GPY28_RS10935 PF02481 DNA recombination-mediator protein A GPY28_RS10935 PF17782 DprA winged helix domain GPY28_RS10940 PF04361 Protein of unknown function (DUF494) GPY28_RS10945 PF01396 Topoisomerase DNA binding C4 zinc finger GPY28_RS10950 PF01797 Transposase IS200 like GPY28_RS10955 PF02222 ATP-grasp domain GPY28_RS10955 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GPY28_RS10960 PF00731 AIR carboxylase GPY28_RS10965 PF01300 Telomere recombination GPY28_RS10970 PF01218 Coproporphyrinogen III oxidase GPY28_RS10975 PF01488 Shikimate / quinate 5-dehydrogenase GPY28_RS10975 PF08501 Shikimate dehydrogenase substrate binding domain GPY28_RS10975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GPY28_RS10980 PF07369 Protein of unknown function (DUF1488) GPY28_RS10985 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS11020 PF03466 LysR substrate binding domain GPY28_RS11025 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GPY28_RS11025 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GPY28_RS11030 PF04380 Membrane fusogenic activity GPY28_RS11035 PF00873 AcrB/AcrD/AcrF family GPY28_RS11040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS11045 PF16295 Tetracyclin repressor-like, C-terminal domain GPY28_RS11045 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS11050 PF00580 UvrD/REP helicase N-terminal domain GPY28_RS11050 PF13361 UvrD-like helicase C-terminal domain GPY28_RS11055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY28_RS11085 PF13419 Haloacid dehalogenase-like hydrolase GPY28_RS11095 PF00005 ABC transporter GPY28_RS11095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS11100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS11110 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY28_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS11145 PF00069 Protein kinase domain GPY28_RS11150 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY28_RS11150 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS11155 PF03466 LysR substrate binding domain GPY28_RS11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS11160 PF00893 Small Multidrug Resistance protein GPY28_RS11165 PF00893 Small Multidrug Resistance protein GPY28_RS11170 PF00920 Dehydratase family GPY28_RS11175 PF01202 Shikimate kinase GPY28_RS11180 PF02447 GntP family permease GPY28_RS11185 PF01081 KDPG and KHG aldolase GPY28_RS11190 PF01048 Phosphorylase superfamily GPY28_RS11195 PF03466 LysR substrate binding domain GPY28_RS11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS11200 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS11200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY28_RS11205 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GPY28_RS11210 PF01432 Peptidase family M3 GPY28_RS11215 PF01037 Lrp/AsnC ligand binding domain GPY28_RS11220 PF00563 EAL domain GPY28_RS11220 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS11220 PF08448 PAS fold GPY28_RS11225 PF04445 Putative SAM-dependent methyltransferase GPY28_RS11235 PF00892 EamA-like transporter family GPY28_RS11240 PF00582 Universal stress protein family GPY28_RS11245 PF00210 Ferritin-like domain GPY28_RS11250 PF10625 Universal stress protein B (UspB) GPY28_RS11260 PF01590 GAF domain GPY28_RS11260 PF02954 Bacterial regulatory protein, Fis family GPY28_RS11260 PF00158 Sigma-54 interaction domain GPY28_RS11285 PF00781 Diacylglycerol kinase catalytic domain GPY28_RS11315 PF01594 AI-2E family transporter GPY28_RS11320 PF00563 EAL domain GPY28_RS11320 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS11320 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS11330 PF02646 RmuC family GPY28_RS11335 PF01209 ubiE/COQ5 methyltransferase family GPY28_RS11340 PF02036 SCP-2 sterol transfer family GPY28_RS11345 PF03109 ABC1 family GPY28_RS11350 PF02416 mttA/Hcf106 family GPY28_RS11355 PF02416 mttA/Hcf106 family GPY28_RS11360 PF00902 Sec-independent protein translocase protein (TatC) GPY28_RS11370 PF01026 TatD related DNase GPY28_RS11380 PF00490 Delta-aminolevulinic acid dehydratase GPY28_RS11385 PF00583 Acetyltransferase (GNAT) family GPY28_RS11395 PF01612 3'-5' exonuclease GPY28_RS11395 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY28_RS11395 PF00476 DNA polymerase family A GPY28_RS11395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY28_RS11400 PF01926 50S ribosome-binding GTPase GPY28_RS11405 PF00034 Cytochrome c GPY28_RS11420 PF04220 Der GTPase activator (YihI) GPY28_RS11425 PF10675 Protein of unknown function (DUF2489) GPY28_RS11430 PF04055 Radical SAM superfamily GPY28_RS11430 PF06969 HemN C-terminal domain GPY28_RS11435 PF00962 Adenosine/AMP deaminase GPY28_RS11440 PF00563 EAL domain GPY28_RS11440 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS11440 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS11445 PF02954 Bacterial regulatory protein, Fis family GPY28_RS11445 PF00158 Sigma-54 interaction domain GPY28_RS11445 PF00072 Response regulator receiver domain GPY28_RS11450 PF00989 PAS fold GPY28_RS11450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS11450 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS11460 PF00120 Glutamine synthetase, catalytic domain GPY28_RS11460 PF03951 Glutamine synthetase, beta-Grasp domain GPY28_RS11470 PF08299 Bacterial dnaA protein helix-turn-helix GPY28_RS11470 PF00308 Bacterial dnaA protein GPY28_RS11480 PF03631 Virulence factor BrkB GPY28_RS11485 PF02580 D-Tyr-tRNA(Tyr) deacylase GPY28_RS11490 PF09500 Putative thioesterase (yiiD_Cterm) GPY28_RS11490 PF00583 Acetyltransferase (GNAT) family GPY28_RS11500 PF01293 Phosphoenolpyruvate carboxykinase GPY28_RS11505 PF01430 Hsp33 protein GPY28_RS11510 PF01479 S4 domain GPY28_RS11515 PF11356 Type II secretion system protein C GPY28_RS11520 PF03958 Bacterial type II/III secretion system short domain GPY28_RS11520 PF00263 Bacterial type II and III secretion system protein GPY28_RS11525 PF00437 Type II/IV secretion system protein GPY28_RS11530 PF00482 Type II secretion system (T2SS), protein F GPY28_RS11535 PF08334 Type II secretion system (T2SS), protein G GPY28_RS11535 PF07963 Prokaryotic N-terminal methylation motif GPY28_RS11540 PF12019 Type II transport protein GspH GPY28_RS11545 PF07963 Prokaryotic N-terminal methylation motif GPY28_RS11545 PF02501 Type II secretion system (T2SS), protein I GPY28_RS11550 PF07963 Prokaryotic N-terminal methylation motif GPY28_RS11550 PF11612 Type II secretion system (T2SS), protein J GPY28_RS11555 PF03934 Type II secretion system (T2SS), protein K GPY28_RS11560 PF12693 GspL periplasmic domain GPY28_RS11560 PF05134 Type II secretion system (T2SS), protein L GPY28_RS11565 PF04612 Type II secretion system (T2SS), protein M GPY28_RS11570 PF01203 Type II secretion system (T2SS), protein N GPY28_RS11575 PF00459 Inositol monophosphatase family GPY28_RS11580 PF00293 NUDIX domain GPY28_RS11585 PF01106 NifU-like domain GPY28_RS11585 PF01521 Iron-sulphur cluster biosynthesis GPY28_RS11590 PF00156 Phosphoribosyl transferase domain GPY28_RS11595 PF00561 alpha/beta hydrolase fold GPY28_RS11605 PF16921 Tex protein YqgF-like domain GPY28_RS11605 PF09371 Tex-like protein N-terminal domain GPY28_RS11605 PF00575 S1 RNA binding domain GPY28_RS11605 PF17674 HHH domain GPY28_RS11615 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY28_RS11615 PF03449 Transcription elongation factor, N-terminal GPY28_RS11625 PF00072 Response regulator receiver domain GPY28_RS11625 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS11630 PF00672 HAMP domain GPY28_RS11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS11630 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS11635 PF00860 Permease family GPY28_RS11640 PF00271 Helicase conserved C-terminal domain GPY28_RS11640 PF00270 DEAD/DEAH box helicase GPY28_RS11640 PF17191 RecG wedge domain GPY28_RS11645 PF00588 SpoU rRNA Methylase family GPY28_RS11645 PF12105 SpoU, rRNA methylase, C-terminal GPY28_RS11650 PF13291 ACT domain GPY28_RS11650 PF02824 TGS domain GPY28_RS11650 PF04607 Region found in RelA / SpoT proteins GPY28_RS11655 PF01192 RNA polymerase Rpb6 GPY28_RS11660 PF00625 Guanylate kinase GPY28_RS11675 PF02472 Biopolymer transport protein ExbD/TolR GPY28_RS11680 PF01618 MotA/TolQ/ExbB proton channel family GPY28_RS11695 PF00593 TonB dependent receptor GPY28_RS11695 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS11705 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS11710 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS11710 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY28_RS11715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS11720 PF00005 ABC transporter GPY28_RS11720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS11725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS11725 PF00005 ABC transporter GPY28_RS11735 PF08340 Domain of unknown function (DUF1732) GPY28_RS11735 PF03755 YicC-like family, N-terminal region GPY28_RS11740 PF03725 3' exoribonuclease family, domain 2 GPY28_RS11740 PF01138 3' exoribonuclease family, domain 1 GPY28_RS11750 PF01797 Transposase IS200 like GPY28_RS11755 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY28_RS11760 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS11765 PF04127 DNA / pantothenate metabolism flavoprotein GPY28_RS11765 PF02441 Flavoprotein GPY28_RS11770 PF00672 HAMP domain GPY28_RS11770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS11770 PF17200 Single Cache domain 2 GPY28_RS11775 PF04002 RadC-like JAB domain GPY28_RS11780 PF00830 Ribosomal L28 family GPY28_RS11785 PF00471 Ribosomal protein L33 GPY28_RS11795 PF06827 Zinc finger found in FPG and IleRS GPY28_RS11795 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GPY28_RS11795 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GPY28_RS11805 PF05686 Glycosyl transferase family 90 GPY28_RS11810 PF01467 Cytidylyltransferase-like GPY28_RS11815 PF00535 Glycosyl transferase family 2 GPY28_RS11820 PF00535 Glycosyl transferase family 2 GPY28_RS11825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY28_RS11830 PF01219 Prokaryotic diacylglycerol kinase GPY28_RS11840 PF16363 GDP-mannose 4,6 dehydratase GPY28_RS11845 PF00483 Nucleotidyl transferase GPY28_RS11855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GPY28_RS11865 PF07922 Glycosyltransferase family 52 GPY28_RS11870 PF00534 Glycosyl transferases group 1 GPY28_RS11870 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GPY28_RS11875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY28_RS11880 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY28_RS11885 PF01370 NAD dependent epimerase/dehydratase family GPY28_RS11890 PF06082 Exopolysaccharide biosynthesis protein YbjH GPY28_RS11920 PF02706 Chain length determinant protein GPY28_RS11925 PF02719 Polysaccharide biosynthesis protein GPY28_RS11930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GPY28_RS11935 PF02350 UDP-N-acetylglucosamine 2-epimerase GPY28_RS11940 PF03102 NeuB family GPY28_RS11940 PF08666 SAF domain GPY28_RS11950 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS11950 PF00483 Nucleotidyl transferase GPY28_RS11955 PF02348 Cytidylyltransferase GPY28_RS11965 PF01501 Glycosyl transferase family 8 GPY28_RS11965 PF00535 Glycosyl transferase family 2 GPY28_RS11970 PF03023 Lipid II flippase MurJ GPY28_RS11980 PF02397 Bacterial sugar transferase GPY28_RS11985 PF07478 D-ala D-ala ligase C-terminus GPY28_RS11985 PF01820 D-ala D-ala ligase N-terminus GPY28_RS11995 PF01168 Alanine racemase, N-terminal domain GPY28_RS11995 PF00842 Alanine racemase, C-terminal domain GPY28_RS12000 PF02719 Polysaccharide biosynthesis protein GPY28_RS12005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GPY28_RS12005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GPY28_RS12005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GPY28_RS12010 PF00483 Nucleotidyl transferase GPY28_RS12015 PF00121 Triosephosphate isomerase GPY28_RS12040 PF00455 DeoR C terminal sensor domain GPY28_RS12040 PF08220 DeoR-like helix-turn-helix domain GPY28_RS12045 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GPY28_RS12050 PF06005 Cell division protein ZapB GPY28_RS12055 PF03737 Aldolase/RraA GPY28_RS12060 PF01040 UbiA prenyltransferase family GPY28_RS12065 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS12065 PF07724 AAA domain (Cdc48 subfamily) GPY28_RS12070 PF00227 Proteasome subunit GPY28_RS12080 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS12085 PF00271 Helicase conserved C-terminal domain GPY28_RS12085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GPY28_RS12085 PF00270 DEAD/DEAH box helicase GPY28_RS12085 PF18074 Primosomal protein N C-terminal domain GPY28_RS12085 PF17764 3′ DNA-binding domain (3′BD) GPY28_RS12095 PF01197 Ribosomal protein L31 GPY28_RS12100 PF00338 Ribosomal protein S10p/S20e GPY28_RS12105 PF00297 Ribosomal protein L3 GPY28_RS12110 PF00573 Ribosomal protein L4/L1 family GPY28_RS12115 PF00276 Ribosomal protein L23 GPY28_RS12120 PF00181 Ribosomal Proteins L2, RNA binding domain GPY28_RS12120 PF03947 Ribosomal Proteins L2, C-terminal domain GPY28_RS12125 PF00203 Ribosomal protein S19 GPY28_RS12130 PF00237 Ribosomal protein L22p/L17e GPY28_RS12135 PF00189 Ribosomal protein S3, C-terminal domain GPY28_RS12135 PF07650 KH domain GPY28_RS12140 PF00252 Ribosomal protein L16p/L10e GPY28_RS12145 PF00831 Ribosomal L29 protein GPY28_RS12150 PF00366 Ribosomal protein S17 GPY28_RS12155 PF00238 Ribosomal protein L14p/L23e GPY28_RS12160 PF00467 KOW motif GPY28_RS12160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GPY28_RS12165 PF00281 Ribosomal protein L5 GPY28_RS12165 PF00673 ribosomal L5P family C-terminus GPY28_RS12170 PF00253 Ribosomal protein S14p/S29e GPY28_RS12175 PF00410 Ribosomal protein S8 GPY28_RS12180 PF00347 Ribosomal protein L6 GPY28_RS12185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GPY28_RS12190 PF03719 Ribosomal protein S5, C-terminal domain GPY28_RS12190 PF00333 Ribosomal protein S5, N-terminal domain GPY28_RS12195 PF00327 Ribosomal protein L30p/L7e GPY28_RS12205 PF00344 SecY translocase GPY28_RS12210 PF00444 Ribosomal protein L36 GPY28_RS12215 PF00416 Ribosomal protein S13/S18 GPY28_RS12220 PF00411 Ribosomal protein S11 GPY28_RS12225 PF01479 S4 domain GPY28_RS12225 PF00163 Ribosomal protein S4/S9 N-terminal domain GPY28_RS12230 PF01000 RNA polymerase Rpb3/RpoA insert domain GPY28_RS12230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GPY28_RS12230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GPY28_RS12235 PF01196 Ribosomal protein L17 GPY28_RS12245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY28_RS12245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY28_RS12255 PF13673 Acetyltransferase (GNAT) domain GPY28_RS12260 PF00270 DEAD/DEAH box helicase GPY28_RS12260 PF03880 DbpA RNA binding domain GPY28_RS12260 PF00271 Helicase conserved C-terminal domain GPY28_RS12270 PF02872 5'-nucleotidase, C-terminal domain GPY28_RS12270 PF00149 Calcineurin-like phosphoesterase GPY28_RS12275 PF10414 Sirohaem synthase dimerisation region GPY28_RS12275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY28_RS12275 PF14824 Sirohaem biosynthesis protein central GPY28_RS12280 PF01507 Phosphoadenosine phosphosulfate reductase family GPY28_RS12285 PF00009 Elongation factor Tu GTP binding domain GPY28_RS12290 PF03600 Citrate transporter GPY28_RS12290 PF02080 TrkA-C domain GPY28_RS12315 PF00005 ABC transporter GPY28_RS12325 PF10795 Protein of unknown function (DUF2607) GPY28_RS12330 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GPY28_RS12335 PF06526 Protein of unknown function (DUF1107) GPY28_RS12340 PF01625 Peptide methionine sulfoxide reductase GPY28_RS12345 PF07244 Surface antigen variable number repeat GPY28_RS12345 PF01103 Surface antigen GPY28_RS12345 PF17243 POTRA domain TamA domain 1 GPY28_RS12350 PF04357 TamB, inner membrane protein subunit of TAM complex GPY28_RS12355 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GPY28_RS12365 PF00719 Inorganic pyrophosphatase GPY28_RS12370 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GPY28_RS12380 PF02875 Mur ligase family, glutamate ligase domain GPY28_RS12380 PF08245 Mur ligase middle domain GPY28_RS12380 PF01225 Mur ligase family, catalytic domain GPY28_RS12385 PF02441 Flavoprotein GPY28_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS12400 PF00005 ABC transporter GPY28_RS12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS12405 PF03466 LysR substrate binding domain GPY28_RS12410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY28_RS12425 PF16868 NMT1-like family GPY28_RS12435 PF02863 Arginine repressor, C-terminal domain GPY28_RS12435 PF01316 Arginine repressor, DNA binding domain GPY28_RS12440 PF00056 lactate/malate dehydrogenase, NAD binding domain GPY28_RS12440 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GPY28_RS12450 PF00348 Polyprenyl synthetase GPY28_RS12455 PF00829 Ribosomal prokaryotic L21 protein GPY28_RS12460 PF01016 Ribosomal L27 protein GPY28_RS12465 PF01926 50S ribosome-binding GTPase GPY28_RS12465 PF01018 GTP1/OBG GPY28_RS12470 PF06738 Putative threonine/serine exporter GPY28_RS12475 PF12821 Threonine/Serine exporter, ThrE GPY28_RS12480 PF00186 Dihydrofolate reductase GPY28_RS12485 PF00149 Calcineurin-like phosphoesterase GPY28_RS12490 PF04379 ApaG domain GPY28_RS12495 PF00398 Ribosomal RNA adenine dimethylase GPY28_RS12500 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GPY28_RS12505 PF09312 SurA N-terminal domain GPY28_RS12510 PF03968 OstA-like protein GPY28_RS12510 PF04453 LPS transport system D GPY28_RS12515 PF05099 Tellurite resistance protein TerB GPY28_RS12515 PF00226 DnaJ domain GPY28_RS12525 PF00694 Aconitase C-terminal domain GPY28_RS12530 PF00330 Aconitase family (aconitate hydratase) GPY28_RS12535 PF00180 Isocitrate/isopropylmalate dehydrogenase GPY28_RS12540 PF08502 LeuA allosteric (dimerisation) domain GPY28_RS12540 PF00682 HMGL-like GPY28_RS12555 PF01569 PAP2 superfamily GPY28_RS12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS12565 PF03466 LysR substrate binding domain GPY28_RS12570 PF00501 AMP-binding enzyme GPY28_RS12575 PF00205 Thiamine pyrophosphate enzyme, central domain GPY28_RS12575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY28_RS12575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY28_RS12580 PF10369 Small subunit of acetolactate synthase GPY28_RS12585 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS12585 PF07694 5TMR of 5TMR-LYT GPY28_RS12595 PF02887 Pyruvate kinase, alpha/beta domain GPY28_RS12595 PF00224 Pyruvate kinase, barrel domain GPY28_RS12600 PF08220 DeoR-like helix-turn-helix domain GPY28_RS12600 PF00455 DeoR C terminal sensor domain GPY28_RS12605 PF01380 SIS domain GPY28_RS12610 PF00465 Iron-containing alcohol dehydrogenase GPY28_RS12615 PF02733 Dak1 domain GPY28_RS12620 PF02734 DAK2 domain GPY28_RS12625 PF00391 PEP-utilising enzyme, mobile domain GPY28_RS12625 PF02896 PEP-utilising enzyme, TIM barrel domain GPY28_RS12625 PF05524 PEP-utilising enzyme, N-terminal GPY28_RS12630 PF00158 Sigma-54 interaction domain GPY28_RS12630 PF00989 PAS fold GPY28_RS12630 PF02954 Bacterial regulatory protein, Fis family GPY28_RS12635 PF05068 Mannitol repressor GPY28_RS12640 PF08125 Mannitol dehydrogenase C-terminal domain GPY28_RS12640 PF01232 Mannitol dehydrogenase Rossmann domain GPY28_RS12645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY28_RS12645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY28_RS12645 PF02378 Phosphotransferase system, EIIC GPY28_RS12665 PF03180 NLPA lipoprotein GPY28_RS12685 PF00589 Phage integrase family GPY28_RS12685 PF02899 Phage integrase, N-terminal SAM-like domain GPY28_RS12710 PF04545 Sigma-70, region 4 GPY28_RS12710 PF03979 Sigma-70 factor, region 1.1 GPY28_RS12710 PF04539 Sigma-70 region 3 GPY28_RS12710 PF04546 Sigma-70, non-essential region GPY28_RS12710 PF00140 Sigma-70 factor, region 1.2 GPY28_RS12710 PF04542 Sigma-70 region 2 GPY28_RS12715 PF10410 DnaB-helicase binding domain of primase GPY28_RS12715 PF08278 DNA primase DnaG DnaB-binding GPY28_RS12715 PF08275 DNA primase catalytic core, N-terminal domain GPY28_RS12715 PF01807 CHC2 zinc finger GPY28_RS12720 PF09424 Yqey-like protein GPY28_RS12725 PF01165 Ribosomal protein S21 GPY28_RS12730 PF00814 Glycoprotease family GPY28_RS12735 PF00561 alpha/beta hydrolase fold GPY28_RS12740 PF02660 Glycerol-3-phosphate acyltransferase GPY28_RS12745 PF02152 Dihydroneopterin aldolase GPY28_RS12750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY28_RS12755 PF02673 Bacitracin resistance protein BacA GPY28_RS12760 PF01966 HD domain GPY28_RS12760 PF01743 Poly A polymerase head domain GPY28_RS12760 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY28_RS12765 PF01471 Putative peptidoglycan binding domain GPY28_RS12765 PF13401 AAA domain GPY28_RS12780 PF08239 Bacterial SH3 domain GPY28_RS12785 PF01384 Phosphate transporter family GPY28_RS12790 PF01865 Protein of unknown function DUF47 GPY28_RS12795 PF01928 CYTH domain GPY28_RS12805 PF02743 Cache domain GPY28_RS12805 PF00672 HAMP domain GPY28_RS12805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS12810 PF08335 GlnD PII-uridylyltransferase GPY28_RS12810 PF03710 Glutamate-ammonia ligase adenylyltransferase GPY28_RS12815 PF01467 Cytidylyltransferase-like GPY28_RS12815 PF00294 pfkB family carbohydrate kinase GPY28_RS12820 PF02321 Outer membrane efflux protein GPY28_RS12825 PF00293 NUDIX domain GPY28_RS12830 PF06853 Protein of unknown function (DUF1249) GPY28_RS12835 PF00149 Calcineurin-like phosphoesterase GPY28_RS12840 PF05728 Uncharacterised protein family (UPF0227) GPY28_RS12845 PF01751 Toprim domain GPY28_RS12845 PF00204 DNA gyrase B GPY28_RS12845 PF00986 DNA gyrase B subunit, carboxyl terminus GPY28_RS12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS12850 PF00521 DNA gyrase/topoisomerase IV, subunit A GPY28_RS12850 PF03989 DNA gyrase C-terminal domain, beta-propeller GPY28_RS12855 PF13180 PDZ domain GPY28_RS12860 PF00595 PDZ domain GPY28_RS12865 PF06295 Protein of unknown function (DUF1043) GPY28_RS12875 PF03969 AFG1-like ATPase GPY28_RS12885 PF00572 Ribosomal protein L13 GPY28_RS12890 PF00380 Ribosomal protein S9/S16 GPY28_RS12895 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GPY28_RS12895 PF00355 Rieske [2Fe-2S] domain GPY28_RS12900 PF00033 Cytochrome b/b6/petB GPY28_RS12900 PF00032 Cytochrome b(C-terminal)/b6/petD GPY28_RS12905 PF02167 Cytochrome C1 family GPY28_RS12910 PF00043 Glutathione S-transferase, C-terminal domain GPY28_RS12910 PF02798 Glutathione S-transferase, N-terminal domain GPY28_RS12915 PF04386 Stringent starvation protein B GPY28_RS12920 PF04972 BON domain GPY28_RS12925 PF13580 SIS domain GPY28_RS12930 PF02021 Uncharacterised protein family UPF0102 GPY28_RS12935 PF04348 LppC putative lipoprotein GPY28_RS12940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY28_RS12955 PF01795 MraW methylase family GPY28_RS12960 PF04999 Cell division protein FtsL GPY28_RS12965 PF03717 Penicillin-binding Protein dimerisation domain GPY28_RS12965 PF00905 Penicillin binding protein transpeptidase domain GPY28_RS12970 PF01225 Mur ligase family, catalytic domain GPY28_RS12970 PF02875 Mur ligase family, glutamate ligase domain GPY28_RS12970 PF08245 Mur ligase middle domain GPY28_RS12975 PF08245 Mur ligase middle domain GPY28_RS12975 PF01225 Mur ligase family, catalytic domain GPY28_RS12975 PF02875 Mur ligase family, glutamate ligase domain GPY28_RS12980 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GPY28_RS12980 PF00953 Glycosyl transferase family 4 GPY28_RS12985 PF08245 Mur ligase middle domain GPY28_RS12985 PF02875 Mur ligase family, glutamate ligase domain GPY28_RS12990 PF01098 Cell cycle protein GPY28_RS12995 PF03033 Glycosyltransferase family 28 N-terminal domain GPY28_RS12995 PF04101 Glycosyltransferase family 28 C-terminal domain GPY28_RS13000 PF01225 Mur ligase family, catalytic domain GPY28_RS13000 PF08245 Mur ligase middle domain GPY28_RS13000 PF02875 Mur ligase family, glutamate ligase domain GPY28_RS13005 PF08478 POTRA domain, FtsQ-type GPY28_RS13005 PF03799 Cell division protein FtsQ GPY28_RS13010 PF02491 SHS2 domain inserted in FTSA GPY28_RS13015 PF12327 FtsZ family, C-terminal domain GPY28_RS13015 PF00091 Tubulin/FtsZ family, GTPase domain GPY28_RS13020 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GPY28_RS13030 PF07517 SecA DEAD-like domain GPY28_RS13030 PF02810 SEC-C motif GPY28_RS13030 PF07516 SecA Wing and Scaffold domain GPY28_RS13030 PF01043 SecA preprotein cross-linking domain GPY28_RS13035 PF00293 NUDIX domain GPY28_RS13040 PF05173 Dihydrodipicolinate reductase, C-terminus GPY28_RS13040 PF01113 Dihydrodipicolinate reductase, N-terminus GPY28_RS13045 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GPY28_RS13045 PF00117 Glutamine amidotransferase class-I GPY28_RS13050 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GPY28_RS13050 PF02142 MGS-like domain GPY28_RS13050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY28_RS13065 PF01925 Sulfite exporter TauE/SafE GPY28_RS13070 PF03466 LysR substrate binding domain GPY28_RS13070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS13075 PF03458 UPF0126 domain GPY28_RS13080 PF01497 Periplasmic binding protein GPY28_RS13085 PF17113 Regulatory signalling modulator protein AmpE GPY28_RS13085 PF03186 CobD/Cbib protein GPY28_RS13090 PF01048 Phosphorylase superfamily GPY28_RS13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS13100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY28_RS13105 PF04898 Glutamate synthase central domain GPY28_RS13105 PF01493 GXGXG motif GPY28_RS13105 PF01645 Conserved region in glutamate synthase GPY28_RS13105 PF00310 Glutamine amidotransferases class-II GPY28_RS13110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY28_RS13110 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS13115 PF01645 Conserved region in glutamate synthase GPY28_RS13115 PF04898 Glutamate synthase central domain GPY28_RS13115 PF01493 GXGXG motif GPY28_RS13115 PF00310 Glutamine amidotransferases class-II GPY28_RS13120 PF04055 Radical SAM superfamily GPY28_RS13120 PF16199 Radical_SAM C-terminal domain GPY28_RS13125 PF00360 Phytochrome region GPY28_RS13125 PF00563 EAL domain GPY28_RS13125 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS13125 PF01590 GAF domain GPY28_RS13130 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS13130 PF01627 Hpt domain GPY28_RS13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS13130 PF18415 Histidine kinase receptor ArcB trans-membrane domain GPY28_RS13130 PF00072 Response regulator receiver domain GPY28_RS13130 PF00989 PAS fold GPY28_RS13140 PF00072 Response regulator receiver domain GPY28_RS13140 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS13155 PF03737 Aldolase/RraA GPY28_RS13170 PF13840 ACT domain GPY28_RS13170 PF01842 ACT domain GPY28_RS13170 PF00696 Amino acid kinase family GPY28_RS13170 PF03447 Homoserine dehydrogenase, NAD binding domain GPY28_RS13170 PF00742 Homoserine dehydrogenase GPY28_RS13175 PF00288 GHMP kinases N terminal domain GPY28_RS13175 PF08544 GHMP kinases C terminal GPY28_RS13180 PF14821 Threonine synthase N terminus GPY28_RS13180 PF00291 Pyridoxal-phosphate dependent enzyme GPY28_RS13190 PF01228 Glycine radical GPY28_RS13195 PF01261 Xylose isomerase-like TIM barrel GPY28_RS13205 PF03167 Uracil DNA glycosylase superfamily GPY28_RS13220 PF01235 Sodium:alanine symporter family GPY28_RS13225 PF03883 Peroxide stress protein YaaA GPY28_RS13230 PF00271 Helicase conserved C-terminal domain GPY28_RS13230 PF00270 DEAD/DEAH box helicase GPY28_RS13235 PF05175 Methyltransferase small domain GPY28_RS13240 PF05525 Branched-chain amino acid transport protein GPY28_RS13245 PF00258 Flavodoxin GPY28_RS13250 PF00589 Phage integrase family GPY28_RS13250 PF02899 Phage integrase, N-terminal SAM-like domain GPY28_RS13255 PF13098 Thioredoxin-like domain GPY28_RS13255 PF10411 Disulfide bond isomerase protein N-terminus GPY28_RS13260 PF02272 DHHA1 domain GPY28_RS13260 PF17768 RecJ OB domain GPY28_RS13260 PF01368 DHH family GPY28_RS13270 PF00152 tRNA synthetases class II (D, K and N) GPY28_RS13270 PF01336 OB-fold nucleic acid binding domain GPY28_RS13275 PF02954 Bacterial regulatory protein, Fis family GPY28_RS13275 PF00072 Response regulator receiver domain GPY28_RS13275 PF00158 Sigma-54 interaction domain GPY28_RS13285 PF00248 Aldo/keto reductase family GPY28_RS13295 PF02976 DNA mismatch repair enzyme MutH GPY28_RS13305 PF00293 NUDIX domain GPY28_RS13310 PF01590 GAF domain GPY28_RS13310 PF00391 PEP-utilising enzyme, mobile domain GPY28_RS13310 PF02896 PEP-utilising enzyme, TIM barrel domain GPY28_RS13310 PF05524 PEP-utilising enzyme, N-terminal GPY28_RS13315 PF01925 Sulfite exporter TauE/SafE GPY28_RS13325 PF00303 Thymidylate synthase GPY28_RS13335 PF02690 Na+/Pi-cotransporter GPY28_RS13340 PF03466 LysR substrate binding domain GPY28_RS13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS13345 PF01022 Bacterial regulatory protein, arsR family GPY28_RS13350 PF01797 Transposase IS200 like GPY28_RS13355 PF01649 Ribosomal protein S20 GPY28_RS13360 PF03023 Lipid II flippase MurJ GPY28_RS13365 PF06574 FAD synthetase GPY28_RS13365 PF01687 Riboflavin kinase GPY28_RS13370 PF08264 Anticodon-binding domain of tRNA GPY28_RS13370 PF06827 Zinc finger found in FPG and IleRS GPY28_RS13370 PF00133 tRNA synthetases class I (I, L, M and V) GPY28_RS13375 PF01252 Signal peptidase (SPase) II GPY28_RS13380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY28_RS13385 PF02401 LytB protein GPY28_RS13395 PF00072 Response regulator receiver domain GPY28_RS13395 PF04397 LytTr DNA-binding domain GPY28_RS13400 PF07694 5TMR of 5TMR-LYT GPY28_RS13400 PF06580 Histidine kinase GPY28_RS13405 PF02554 Carbon starvation protein CstA GPY28_RS13420 PF01380 SIS domain GPY28_RS13425 PF03702 Anhydro-N-acetylmuramic acid kinase GPY28_RS13430 PF00933 Glycosyl hydrolase family 3 N terminal domain GPY28_RS13435 PF00793 DAHP synthetase I family GPY28_RS13440 PF01817 Chorismate mutase type II GPY28_RS13440 PF02153 Prephenate dehydrogenase GPY28_RS13445 PF04225 Opacity-associated protein A LysM-like domain GPY28_RS13445 PF01551 Peptidase family M23 GPY28_RS13450 PF07238 PilZ domain GPY28_RS13455 PF00005 ABC transporter GPY28_RS13455 PF12848 ABC transporter GPY28_RS13460 PF14718 Soluble lytic murein transglycosylase L domain GPY28_RS13460 PF01464 Transglycosylase SLT domain GPY28_RS13465 PF01371 Trp repressor protein GPY28_RS13470 PF01931 Protein of unknown function DUF84 GPY28_RS13475 PF01817 Chorismate mutase type II GPY28_RS13475 PF00800 Prephenate dehydratase GPY28_RS13480 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY28_RS13485 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS13485 PF01464 Transglycosylase SLT domain GPY28_RS13490 PF13525 Outer membrane lipoprotein GPY28_RS13495 PF01479 S4 domain GPY28_RS13495 PF00849 RNA pseudouridylate synthase GPY28_RS13505 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS13505 PF10431 C-terminal, D2-small domain, of ClpB protein GPY28_RS13505 PF02861 Clp amino terminal domain, pathogenicity island component GPY28_RS13505 PF17871 AAA lid domain GPY28_RS13505 PF07724 AAA domain (Cdc48 subfamily) GPY28_RS13555 PF03411 Penicillin-insensitive murein endopeptidase GPY28_RS13565 PF00037 4Fe-4S binding domain GPY28_RS13575 PF04381 Putative exonuclease, RdgC GPY28_RS13580 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS13580 PF00072 Response regulator receiver domain GPY28_RS13585 PF11808 Phosphate regulon sensor protein PhoR GPY28_RS13585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS13585 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS13585 PF00989 PAS fold GPY28_RS13590 PF12849 PBP superfamily domain GPY28_RS13595 PF02541 Ppx/GppA phosphatase family GPY28_RS13600 PF13089 Polyphosphate kinase N-terminal domain GPY28_RS13600 PF13090 Polyphosphate kinase C-terminal domain 2 GPY28_RS13600 PF02503 Polyphosphate kinase middle domain GPY28_RS13600 PF17941 Polyphosphate kinase C-terminal domain 1 GPY28_RS13605 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS13610 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS13615 PF00005 ABC transporter GPY28_RS13620 PF01895 PhoU domain GPY28_RS13625 PF03976 Polyphosphate kinase 2 (PPK2) GPY28_RS13630 PF03932 CutC family GPY28_RS13635 PF10417 C-terminal domain of 1-Cys peroxiredoxin GPY28_RS13635 PF00578 AhpC/TSA family GPY28_RS13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS13640 PF03466 LysR substrate binding domain GPY28_RS13650 PF01274 Malate synthase GPY28_RS13655 PF00463 Isocitrate lyase family GPY28_RS13660 PF00571 CBS domain GPY28_RS13670 PF02547 Queuosine biosynthesis protein GPY28_RS13675 PF01702 Queuine tRNA-ribosyltransferase GPY28_RS13680 PF02699 Preprotein translocase subunit GPY28_RS13685 PF13721 SecD export protein N-terminal TM region GPY28_RS13685 PF02355 Protein export membrane protein GPY28_RS13685 PF07549 SecD/SecF GG Motif GPY28_RS13690 PF02355 Protein export membrane protein GPY28_RS13690 PF07549 SecD/SecF GG Motif GPY28_RS13705 PF00459 Inositol monophosphatase family GPY28_RS13710 PF00588 SpoU rRNA Methylase family GPY28_RS13715 PF02082 Transcriptional regulator GPY28_RS13720 PF00266 Aminotransferase class-V GPY28_RS13725 PF01592 NifU-like N terminal domain GPY28_RS13730 PF01521 Iron-sulphur cluster biosynthesis GPY28_RS13735 PF07743 HSCB C-terminal oligomerisation domain GPY28_RS13735 PF00226 DnaJ domain GPY28_RS13740 PF00012 Hsp70 protein GPY28_RS13745 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY28_RS13750 PF04384 Iron-sulphur cluster assembly GPY28_RS13755 PF12404 Peptidase GPY28_RS13755 PF00883 Cytosol aminopeptidase family, catalytic domain GPY28_RS13760 PF00334 Nucleoside diphosphate kinase GPY28_RS13765 PF04055 Radical SAM superfamily GPY28_RS13770 PF13464 Domain of unknown function (DUF4115) GPY28_RS13775 PF04551 GcpE protein GPY28_RS13780 PF03129 Anticodon binding domain GPY28_RS13780 PF13393 Histidyl-tRNA synthetase GPY28_RS13785 PF09976 Tetratricopeptide repeat-like domain GPY28_RS13790 PF13360 PQQ-like domain GPY28_RS13795 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GPY28_RS13795 PF01926 50S ribosome-binding GTPase GPY28_RS13810 PF13742 OB-fold nucleic acid binding domain GPY28_RS13810 PF02601 Exonuclease VII, large subunit GPY28_RS13815 PF00478 IMP dehydrogenase / GMP reductase domain GPY28_RS13815 PF00571 CBS domain GPY28_RS13820 PF02540 NAD synthase GPY28_RS13820 PF00117 Glutamine amidotransferase class-I GPY28_RS13820 PF00958 GMP synthase C terminal domain GPY28_RS13825 PF03553 Na+/H+ antiporter family GPY28_RS13830 PF00704 Glycosyl hydrolases family 18 GPY28_RS13830 PF06483 Chitinase C GPY28_RS13835 PF01184 GPR1/FUN34/yaaH family GPY28_RS13840 PF01235 Sodium:alanine symporter family GPY28_RS13845 PF01266 FAD dependent oxidoreductase GPY28_RS13855 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY28_RS13860 PF00202 Aminotransferase class-III GPY28_RS13880 PF00795 Carbon-nitrogen hydrolase GPY28_RS13880 PF00583 Acetyltransferase (GNAT) family GPY28_RS13885 PF03466 LysR substrate binding domain GPY28_RS13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS13905 PF00239 Resolvase, N terminal domain GPY28_RS13905 PF02796 Helix-turn-helix domain of resolvase GPY28_RS13925 PF00075 RNase H GPY28_RS13940 PF01668 SmpB protein GPY28_RS13945 PF03364 Polyketide cyclase / dehydrase and lipid transport GPY28_RS13950 PF03658 RnfH family Ubiquitin GPY28_RS13955 PF04355 SmpA / OmlA family GPY28_RS13965 PF02463 RecF/RecN/SMC N terminal domain GPY28_RS13975 PF01513 ATP-NAD kinase GPY28_RS13980 PF01025 GrpE GPY28_RS13985 PF00375 Sodium:dicarboxylate symporter family GPY28_RS13990 PF00012 Hsp70 protein GPY28_RS13995 PF00226 DnaJ domain GPY28_RS13995 PF01556 DnaJ C terminal domain GPY28_RS13995 PF00684 DnaJ central domain GPY28_RS14030 PF03806 AbgT putative transporter family GPY28_RS14035 PF14437 MafB19-like deaminase GPY28_RS14045 PF01464 Transglycosylase SLT domain GPY28_RS14045 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS14050 PF02769 AIR synthase related protein, C-terminal domain GPY28_RS14050 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GPY28_RS14050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GPY28_RS14065 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS14065 PF00593 TonB dependent receptor GPY28_RS14080 PF07687 Peptidase dimerisation domain GPY28_RS14080 PF01546 Peptidase family M20/M25/M40 GPY28_RS14085 PF00860 Permease family GPY28_RS14090 PF00156 Phosphoribosyl transferase domain GPY28_RS14100 PF07417 Sigma factor-binding transcriptional regulator Crl GPY28_RS14105 PF00696 Amino acid kinase family GPY28_RS14105 PF01472 PUA domain GPY28_RS14110 PF00171 Aldehyde dehydrogenase family GPY28_RS14115 PF03477 ATP cone domain GPY28_RS14120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY28_RS14120 PF01872 RibD C-terminal domain GPY28_RS14125 PF00677 Lumazine binding domain GPY28_RS14130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY28_RS14130 PF00925 GTP cyclohydrolase II GPY28_RS14135 PF00885 6,7-dimethyl-8-ribityllumazine synthase GPY28_RS14140 PF01029 NusB family GPY28_RS14145 PF00586 AIR synthase related protein, N-terminal domain GPY28_RS14145 PF02769 AIR synthase related protein, C-terminal domain GPY28_RS14150 PF04608 Phosphatidylglycerophosphatase A GPY28_RS14155 PF02780 Transketolase, C-terminal domain GPY28_RS14155 PF02779 Transketolase, pyrimidine binding domain GPY28_RS14155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GPY28_RS14160 PF00348 Polyprenyl synthetase GPY28_RS14165 PF02609 Exonuclease VII small subunit GPY28_RS14170 PF01618 MotA/TolQ/ExbB proton channel family GPY28_RS14175 PF13677 Membrane MotB of proton-channel complex MotA/MotB GPY28_RS14175 PF00691 OmpA family GPY28_RS14180 PF02926 THUMP domain GPY28_RS14180 PF02568 Thiamine biosynthesis protein (ThiI) GPY28_RS14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS14185 PF03466 LysR substrate binding domain GPY28_RS14195 PF04241 Protein of unknown function (DUF423) GPY28_RS14200 PF01728 FtsJ-like methyltransferase GPY28_RS14200 PF18125 RlmM ferredoxin-like domain GPY28_RS14205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY28_RS14205 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY28_RS14210 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GPY28_RS14210 PF03641 Possible lysine decarboxylase GPY28_RS14210 PF11892 Domain of unknown function (DUF3412) GPY28_RS14215 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS14215 PF00072 Response regulator receiver domain GPY28_RS14225 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GPY28_RS14225 PF14489 QueF-like protein GPY28_RS14230 PF07348 Syd protein (SUKH-2) GPY28_RS14235 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GPY28_RS14240 PF03180 NLPA lipoprotein GPY28_RS14245 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS14250 PF00005 ABC transporter GPY28_RS14250 PF09383 NIL domain GPY28_RS14260 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS14265 PF00367 phosphotransferase system, EIIB GPY28_RS14265 PF02378 Phosphotransferase system, EIIC GPY28_RS14270 PF16657 Maltogenic Amylase, C-terminal domain GPY28_RS14270 PF00128 Alpha amylase, catalytic domain GPY28_RS14285 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GPY28_RS14285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GPY28_RS14290 PF00464 Serine hydroxymethyltransferase GPY28_RS14295 PF04055 Radical SAM superfamily GPY28_RS14295 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GPY28_RS14300 PF03099 Biotin/lipoate A/B protein ligase family GPY28_RS14305 PF04359 Protein of unknown function (DUF493) GPY28_RS14310 PF00768 D-alanyl-D-alanine carboxypeptidase GPY28_RS14310 PF07943 Penicillin-binding protein 5, C-terminal domain GPY28_RS14315 PF05036 Sporulation related domain GPY28_RS14315 PF03330 Lytic transglycolase GPY28_RS14320 PF01098 Cell cycle protein GPY28_RS14325 PF00905 Penicillin binding protein transpeptidase domain GPY28_RS14325 PF03717 Penicillin-binding Protein dimerisation domain GPY28_RS14330 PF02590 Predicted SPOUT methyltransferase GPY28_RS14340 PF06144 DNA polymerase III, delta subunit GPY28_RS14340 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GPY28_RS14345 PF04390 Lipopolysaccharide-assembly GPY28_RS14350 PF00133 tRNA synthetases class I (I, L, M and V) GPY28_RS14350 PF13603 Leucyl-tRNA synthetase, Domain 2 GPY28_RS14350 PF08264 Anticodon-binding domain of tRNA GPY28_RS14355 PF07295 Zinc-ribbon containing domain GPY28_RS14360 PF01797 Transposase IS200 like GPY28_RS14365 PF00795 Carbon-nitrogen hydrolase GPY28_RS14370 PF00571 CBS domain GPY28_RS14370 PF03471 Transporter associated domain GPY28_RS14375 PF02130 Uncharacterized protein family UPF0054 GPY28_RS14380 PF02562 PhoH-like protein GPY28_RS14385 PF00919 Uncharacterized protein family UPF0004 GPY28_RS14385 PF01938 TRAM domain GPY28_RS14385 PF04055 Radical SAM superfamily GPY28_RS14395 PF01494 FAD binding domain GPY28_RS14505 PF01926 50S ribosome-binding GTPase GPY28_RS14505 PF06071 Protein of unknown function (DUF933) GPY28_RS14510 PF01195 Peptidyl-tRNA hydrolase GPY28_RS14515 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GPY28_RS14515 PF14572 Phosphoribosyl synthetase-associated domain GPY28_RS14520 PF00288 GHMP kinases N terminal domain GPY28_RS14520 PF08544 GHMP kinases C terminal GPY28_RS14525 PF03550 Outer membrane lipoprotein LolB GPY28_RS14530 PF01488 Shikimate / quinate 5-dehydrogenase GPY28_RS14530 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GPY28_RS14530 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GPY28_RS14535 PF03462 PCRF domain GPY28_RS14535 PF00472 RF-1 domain GPY28_RS14540 PF13847 Methyltransferase domain GPY28_RS14540 PF17827 PrmC N-terminal domain GPY28_RS14545 PF04247 Invasion gene expression up-regulator, SirB GPY28_RS14550 PF13369 Transglutaminase-like superfamily GPY28_RS14555 PF00793 DAHP synthetase I family GPY28_RS14560 PF02872 5'-nucleotidase, C-terminal domain GPY28_RS14560 PF00149 Calcineurin-like phosphoesterase GPY28_RS14565 PF04073 Aminoacyl-tRNA editing domain GPY28_RS14570 PF00849 RNA pseudouridylate synthase GPY28_RS14570 PF01479 S4 domain GPY28_RS14575 PF01713 Smr domain GPY28_RS14600 PF02838 Glycosyl hydrolase family 20, domain 2 GPY28_RS14600 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY28_RS14600 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GPY28_RS14600 PF03173 Putative carbohydrate binding domain GPY28_RS14615 PF00403 Heavy-metal-associated domain GPY28_RS14625 PF13609 Gram-negative porin GPY28_RS14630 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY28_RS14635 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY28_RS14640 PF00691 OmpA family GPY28_RS14640 PF01389 OmpA-like transmembrane domain GPY28_RS14685 PF01584 CheW-like domain GPY28_RS14685 PF00072 Response regulator receiver domain GPY28_RS14690 PF03705 CheR methyltransferase, all-alpha domain GPY28_RS14690 PF01739 CheR methyltransferase, SAM binding domain GPY28_RS14695 PF01797 Transposase IS200 like GPY28_RS14700 PF00460 Flagella basal body rod protein GPY28_RS14705 PF00460 Flagella basal body rod protein GPY28_RS14705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS14710 PF13861 FlgD Tudor-like domain GPY28_RS14710 PF03963 Flagellar hook capping protein - N-terminal region GPY28_RS14710 PF13860 FlgD Ig-like domain GPY28_RS14715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS14715 PF00460 Flagella basal body rod protein GPY28_RS14715 PF07559 Flagellar basal body protein FlaE GPY28_RS14720 PF00460 Flagella basal body rod protein GPY28_RS14720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS14725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS14725 PF00460 Flagella basal body rod protein GPY28_RS14730 PF02107 Flagellar L-ring protein GPY28_RS14735 PF02119 Flagellar P-ring protein GPY28_RS14740 PF10135 Rod binding protein GPY28_RS14740 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GPY28_RS14745 PF07196 Flagellin hook IN motif GPY28_RS14745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY28_RS14750 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS14755 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS14755 PF07196 Flagellin hook IN motif GPY28_RS14755 PF00700 Bacterial flagellin C-terminal helical region GPY28_RS14765 PF07196 Flagellin hook IN motif GPY28_RS14765 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS14765 PF00700 Bacterial flagellin C-terminal helical region GPY28_RS14770 PF07196 Flagellin hook IN motif GPY28_RS14770 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS14770 PF00700 Bacterial flagellin C-terminal helical region GPY28_RS14780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY28_RS14785 PF02896 PEP-utilising enzyme, TIM barrel domain GPY28_RS14785 PF05524 PEP-utilising enzyme, N-terminal GPY28_RS14785 PF00391 PEP-utilising enzyme, mobile domain GPY28_RS14790 PF00381 PTS HPr component phosphorylation site GPY28_RS14800 PF00291 Pyridoxal-phosphate dependent enzyme GPY28_RS14810 PF04354 ZipA, C-terminal FtsZ-binding domain GPY28_RS14815 PF01653 NAD-dependent DNA ligase adenylation domain GPY28_RS14815 PF12826 Helix-hairpin-helix motif GPY28_RS14815 PF03120 NAD-dependent DNA ligase OB-fold domain GPY28_RS14815 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GPY28_RS14815 PF00533 BRCA1 C Terminus (BRCT) domain GPY28_RS14820 PF03573 outer membrane porin, OprD family GPY28_RS14835 PF01145 SPFH domain / Band 7 family GPY28_RS14835 PF16200 C-terminal region of band_7 GPY28_RS14840 PF00085 Thioredoxin GPY28_RS14850 PF00106 short chain dehydrogenase GPY28_RS14855 PF08338 Domain of unknown function (DUF1731) GPY28_RS14855 PF01370 NAD dependent epimerase/dehydratase family GPY28_RS14860 PF07556 Protein of unknown function (DUF1538) GPY28_RS14865 PF07556 Protein of unknown function (DUF1538) GPY28_RS14885 PF12850 Calcineurin-like phosphoesterase superfamily domain GPY28_RS14900 PF17323 Trans-membrane regulatory protein ToxS GPY28_RS14905 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS14910 PF00183 Hsp90 protein GPY28_RS14915 PF05191 Adenylate kinase, active site lid GPY28_RS14920 PF00762 Ferrochelatase GPY28_RS14925 PF00854 POT family GPY28_RS14930 PF02357 Transcription termination factor nusG GPY28_RS14935 PF00733 Asparagine synthase GPY28_RS14935 PF13537 Glutamine amidotransferase domain GPY28_RS14940 PF00999 Sodium/hydrogen exchanger family GPY28_RS14940 PF02254 TrkA-N domain GPY28_RS14945 PF01047 MarR family GPY28_RS14945 PF00480 ROK family GPY28_RS14950 PF01979 Amidohydrolase family GPY28_RS14960 PF00367 phosphotransferase system, EIIB GPY28_RS14960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY28_RS14960 PF02378 Phosphotransferase system, EIIC GPY28_RS14965 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY28_RS14965 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GPY28_RS14970 PF01475 Ferric uptake regulator family GPY28_RS14980 PF00258 Flavodoxin GPY28_RS14990 PF12697 Alpha/beta hydrolase family GPY28_RS14995 PF17206 SeqA protein N-terminal domain GPY28_RS14995 PF03925 SeqA protein C-terminal domain GPY28_RS15000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY28_RS15000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY28_RS15000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY28_RS15000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY28_RS15010 PF01784 NIF3 (NGG1p interacting factor 3) GPY28_RS15015 PF00285 Citrate synthase, C-terminal domain GPY28_RS15020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY28_RS15025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY28_RS15030 PF00890 FAD binding domain GPY28_RS15030 PF02910 Fumarate reductase flavoprotein C-term GPY28_RS15035 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY28_RS15040 PF00676 Dehydrogenase E1 component GPY28_RS15040 PF02779 Transketolase, pyrimidine binding domain GPY28_RS15040 PF16870 2-oxoglutarate dehydrogenase C-terminal GPY28_RS15040 PF16078 2-oxoglutarate dehydrogenase N-terminus GPY28_RS15045 PF02817 e3 binding domain GPY28_RS15045 PF00364 Biotin-requiring enzyme GPY28_RS15045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY28_RS15050 PF08442 ATP-grasp domain GPY28_RS15050 PF00549 CoA-ligase GPY28_RS15055 PF02629 CoA binding domain GPY28_RS15055 PF00549 CoA-ligase GPY28_RS15060 PF00950 ABC 3 transport family GPY28_RS15065 PF00005 ABC transporter GPY28_RS15070 PF01297 Zinc-uptake complex component A periplasmic GPY28_RS15080 PF04023 FeoA domain GPY28_RS15085 PF07670 Nucleoside recognition GPY28_RS15085 PF02421 Ferrous iron transport protein B GPY28_RS15085 PF07664 Ferrous iron transport protein B C terminus GPY28_RS15085 PF17910 FeoB cytosolic helical domain GPY28_RS15105 PF00750 tRNA synthetases class I (R) GPY28_RS15105 PF05746 DALR anticodon binding domain GPY28_RS15105 PF03485 Arginyl tRNA synthetase N terminal domain GPY28_RS15115 PF06185 YecM protein GPY28_RS15120 PF01842 ACT domain GPY28_RS15120 PF00551 Formyl transferase GPY28_RS15125 PF04851 Type III restriction enzyme, res subunit GPY28_RS15125 PF13307 Helicase C-terminal domain GPY28_RS15130 PF00814 Glycoprotease family GPY28_RS15140 PF03843 Outer membrane lipoprotein Slp family GPY28_RS15145 PF00561 alpha/beta hydrolase fold GPY28_RS15150 PF00501 AMP-binding enzyme GPY28_RS15150 PF13193 AMP-binding enzyme C-terminal domain GPY28_RS15155 PF01612 3'-5' exonuclease GPY28_RS15155 PF00570 HRDC domain GPY28_RS15160 PF03776 Septum formation topological specificity factor MinE GPY28_RS15165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY28_RS15170 PF05209 Septum formation inhibitor MinC, N-terminal domain GPY28_RS15170 PF03775 Septum formation inhibitor MinC, C-terminal domain GPY28_RS15175 PF05166 YcgL domain GPY28_RS15180 PF13406 Transglycosylase SLT domain GPY28_RS15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS15185 PF03466 LysR substrate binding domain GPY28_RS15190 PF07670 Nucleoside recognition GPY28_RS15190 PF01773 Na+ dependent nucleoside transporter N-terminus GPY28_RS15190 PF07662 Na+ dependent nucleoside transporter C-terminus GPY28_RS15195 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GPY28_RS15195 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GPY28_RS15205 PF01209 ubiE/COQ5 methyltransferase family GPY28_RS15210 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY28_RS15210 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY28_RS15220 PF07977 FabA-like domain GPY28_RS15225 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY28_RS15225 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY28_RS15250 PF00221 Aromatic amino acid lyase GPY28_RS15255 PF00535 Glycosyl transferase family 2 GPY28_RS15260 PF07977 FabA-like domain GPY28_RS15275 PF00550 Phosphopantetheine attachment site GPY28_RS15280 PF00550 Phosphopantetheine attachment site GPY28_RS15305 PF04820 Tryptophan halogenase GPY28_RS15315 PF00271 Helicase conserved C-terminal domain GPY28_RS15315 PF00270 DEAD/DEAH box helicase GPY28_RS15320 PF02254 TrkA-N domain GPY28_RS15320 PF02080 TrkA-C domain GPY28_RS15325 PF02386 Cation transport protein GPY28_RS15340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GPY28_RS15345 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY28_RS15350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GPY28_RS15355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY28_RS15360 PF02954 Bacterial regulatory protein, Fis family GPY28_RS15360 PF00072 Response regulator receiver domain GPY28_RS15360 PF00158 Sigma-54 interaction domain GPY28_RS15365 PF02743 Cache domain GPY28_RS15365 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS15370 PF05697 Bacterial trigger factor protein (TF) GPY28_RS15370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY28_RS15370 PF05698 Bacterial trigger factor protein (TF) C-terminus GPY28_RS15375 PF00574 Clp protease GPY28_RS15380 PF07724 AAA domain (Cdc48 subfamily) GPY28_RS15380 PF06689 ClpX C4-type zinc finger GPY28_RS15380 PF10431 C-terminal, D2-small domain, of ClpB protein GPY28_RS15385 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS15385 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY28_RS15385 PF02190 ATP-dependent protease La (LON) substrate-binding domain GPY28_RS15390 PF00216 Bacterial DNA-binding protein GPY28_RS15395 PF13145 PPIC-type PPIASE domain GPY28_RS15415 PF01966 HD domain GPY28_RS15415 PF13286 Phosphohydrolase-associated domain GPY28_RS15425 PF00155 Aminotransferase class I and II GPY28_RS15430 PF00425 chorismate binding enzyme GPY28_RS15435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY28_RS15435 PF16582 Middle domain of thiamine pyrophosphate GPY28_RS15435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY28_RS15440 PF12697 Alpha/beta hydrolase family GPY28_RS15445 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS15450 PF13378 Enolase C-terminal domain-like GPY28_RS15455 PF00501 AMP-binding enzyme GPY28_RS15455 PF13193 AMP-binding enzyme C-terminal domain GPY28_RS15465 PF03601 Conserved hypothetical protein 698 GPY28_RS15470 PF07690 Major Facilitator Superfamily GPY28_RS15515 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS15515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS15520 PF00873 AcrB/AcrD/AcrF family GPY28_RS15535 PF00291 Pyridoxal-phosphate dependent enzyme GPY28_RS15540 PF13404 AsnC-type helix-turn-helix domain GPY28_RS15540 PF01037 Lrp/AsnC ligand binding domain GPY28_RS15555 PF09619 Type III secretion system lipoprotein chaperone (YscW) GPY28_RS15560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY28_RS15570 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS15570 PF08448 PAS fold GPY28_RS15655 PF12792 CSS motif domain associated with EAL GPY28_RS15655 PF00563 EAL domain GPY28_RS15660 PF08241 Methyltransferase domain GPY28_RS15675 PF00072 Response regulator receiver domain GPY28_RS15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS15675 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS15675 PF09308 LuxQ, periplasmic GPY28_RS15695 PF00580 UvrD/REP helicase N-terminal domain GPY28_RS15695 PF13361 UvrD-like helicase C-terminal domain GPY28_RS15750 PF00588 SpoU rRNA Methylase family GPY28_RS15750 PF08032 RNA 2'-O ribose methyltransferase substrate binding GPY28_RS15755 PF00478 IMP dehydrogenase / GMP reductase domain GPY28_RS15755 PF00571 CBS domain GPY28_RS15760 PF00403 Heavy-metal-associated domain GPY28_RS15765 PF01048 Phosphorylase superfamily GPY28_RS15775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS15775 PF00672 HAMP domain GPY28_RS15780 PF01230 HIT domain GPY28_RS15795 PF13036 Peptidoglycan-synthase activator LpoB GPY28_RS15795 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GPY28_RS15800 PF01636 Phosphotransferase enzyme family GPY28_RS15805 PF05728 Uncharacterised protein family (UPF0227) GPY28_RS15810 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS15825 PF02559 CarD-like/TRCF domain GPY28_RS15825 PF00270 DEAD/DEAH box helicase GPY28_RS15825 PF00271 Helicase conserved C-terminal domain GPY28_RS15825 PF03461 TRCF domain GPY28_RS15825 PF17757 UvrB interaction domain GPY28_RS15835 PF02687 FtsX-like permease family GPY28_RS15835 PF12704 MacB-like periplasmic core domain GPY28_RS15840 PF00005 ABC transporter GPY28_RS15845 PF02687 FtsX-like permease family GPY28_RS15845 PF12704 MacB-like periplasmic core domain GPY28_RS15855 PF03772 Competence protein GPY28_RS15855 PF13567 Domain of unknown function (DUF4131) GPY28_RS15855 PF00753 Metallo-beta-lactamase superfamily GPY28_RS15860 PF00005 ABC transporter GPY28_RS15860 PF00664 ABC transporter transmembrane region GPY28_RS15865 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GPY28_RS15870 PF03966 Trm112p-like protein GPY28_RS15875 PF02348 Cytidylyltransferase GPY28_RS15880 PF04293 SpoVR like protein GPY28_RS15885 PF04285 Protein of unknown function (DUF444) GPY28_RS15890 PF06798 PrkA serine protein kinase C-terminal domain GPY28_RS15890 PF08298 PrkA AAA domain GPY28_RS15895 PF03887 YfbU domain GPY28_RS15905 PF04055 Radical SAM superfamily GPY28_RS15915 PF02901 Pyruvate formate lyase-like GPY28_RS15915 PF01228 Glycine radical GPY28_RS15935 PF00005 ABC transporter GPY28_RS15940 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS15945 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS15960 PF03372 Endonuclease/Exonuclease/phosphatase family GPY28_RS15965 PF10689 Protein of unknown function (DUF2496) GPY28_RS15970 PF07445 Primosomal replication protein priC GPY28_RS15975 PF01925 Sulfite exporter TauE/SafE GPY28_RS15980 PF06733 DEAD_2 GPY28_RS15980 PF13307 Helicase C-terminal domain GPY28_RS15990 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY28_RS15995 PF00849 RNA pseudouridylate synthase GPY28_RS16000 PF03971 Monomeric isocitrate dehydrogenase GPY28_RS16005 PF00313 'Cold-shock' DNA-binding domain GPY28_RS16010 PF02617 ATP-dependent Clp protease adaptor protein ClpS GPY28_RS16015 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS16015 PF07724 AAA domain (Cdc48 subfamily) GPY28_RS16015 PF17871 AAA lid domain GPY28_RS16015 PF02861 Clp amino terminal domain, pathogenicity island component GPY28_RS16015 PF10431 C-terminal, D2-small domain, of ClpB protein GPY28_RS16020 PF01176 Translation initiation factor 1A / IF-1 GPY28_RS16025 PF04376 Arginine-tRNA-protein transferase, N terminus GPY28_RS16025 PF04377 Arginine-tRNA-protein transferase, C terminus GPY28_RS16030 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GPY28_RS16040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GPY28_RS16045 PF10692 Protein of unknown function (DUF2498) GPY28_RS16050 PF01396 Topoisomerase DNA binding C4 zinc finger GPY28_RS16050 PF08272 Topoisomerase I zinc-ribbon-like GPY28_RS16050 PF01751 Toprim domain GPY28_RS16050 PF01131 DNA topoisomerase GPY28_RS16055 PF00483 Nucleotidyl transferase GPY28_RS16060 PF00534 Glycosyl transferases group 1 GPY28_RS16060 PF08323 Starch synthase catalytic domain GPY28_RS16080 PF04993 TfoX N-terminal domain GPY28_RS16080 PF04994 TfoX C-terminal domain GPY28_RS16085 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS16090 PF02613 Nitrate reductase delta subunit GPY28_RS16095 PF00072 Response regulator receiver domain GPY28_RS16095 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS16100 PF02698 DUF218 domain GPY28_RS16110 PF03882 MukF winged-helix domain GPY28_RS16110 PF17192 MukF middle domain GPY28_RS16110 PF17193 MukF C-terminal domain GPY28_RS16115 PF04288 MukE-like family GPY28_RS16120 PF04310 MukB N-terminal GPY28_RS16120 PF16330 MukB hinge domain GPY28_RS16140 PF08443 RimK-like ATP-grasp domain GPY28_RS16140 PF18030 RimK PreATP-grasp domain GPY28_RS16150 PF08003 Protein of unknown function (DUF1698) GPY28_RS16155 PF13649 Methyltransferase domain GPY28_RS16160 PF01904 Protein of unknown function DUF72 GPY28_RS16165 PF01336 OB-fold nucleic acid binding domain GPY28_RS16165 PF00152 tRNA synthetases class II (D, K and N) GPY28_RS16165 PF02938 GAD domain GPY28_RS16170 PF01709 Transcriptional regulator GPY28_RS16175 PF02075 Crossover junction endodeoxyribonuclease RuvC GPY28_RS16180 PF01330 RuvA N terminal domain GPY28_RS16180 PF07499 RuvA, C-terminal domain GPY28_RS16185 PF05496 Holliday junction DNA helicase RuvB P-loop domain GPY28_RS16185 PF05491 RuvB C-terminal winged helix domain GPY28_RS16185 PF17864 RuvB AAA lid domain GPY28_RS16190 PF01654 Cytochrome bd terminal oxidase subunit I GPY28_RS16195 PF02322 Cytochrome bd terminal oxidase subunit II GPY28_RS16200 PF08173 Membrane bound YbgT-like protein GPY28_RS16210 PF03061 Thioesterase superfamily GPY28_RS16215 PF01618 MotA/TolQ/ExbB proton channel family GPY28_RS16220 PF02472 Biopolymer transport protein ExbD/TolR GPY28_RS16230 PF07676 WD40-like Beta Propeller Repeat GPY28_RS16230 PF04052 TolB amino-terminal domain GPY28_RS16235 PF00691 OmpA family GPY28_RS16240 PF16331 TolA binding protein trimerisation GPY28_RS16240 PF13174 Tetratricopeptide repeat GPY28_RS16245 PF02445 Quinolinate synthetase A protein GPY28_RS16255 PF03994 Domain of Unknown Function (DUF350) GPY28_RS16265 PF03738 Glutathionylspermidine synthase preATP-grasp GPY28_RS16275 PF09308 LuxQ, periplasmic GPY28_RS16275 PF00072 Response regulator receiver domain GPY28_RS16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS16275 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS16280 PF06610 L-alanine exporter GPY28_RS16290 PF02322 Cytochrome bd terminal oxidase subunit II GPY28_RS16295 PF01654 Cytochrome bd terminal oxidase subunit I GPY28_RS16310 PF17200 Single Cache domain 2 GPY28_RS16310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS16310 PF00672 HAMP domain GPY28_RS16315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS16315 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS16320 PF00873 AcrB/AcrD/AcrF family GPY28_RS16335 PF00579 tRNA synthetases class I (W and Y) GPY28_RS16345 PF03372 Endonuclease/Exonuclease/phosphatase family GPY28_RS16355 PF00672 HAMP domain GPY28_RS16355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS16360 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GPY28_RS16370 PF03466 LysR substrate binding domain GPY28_RS16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS16380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY28_RS16380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY28_RS16385 PF01037 Lrp/AsnC ligand binding domain GPY28_RS16390 PF09397 Ftsk gamma domain GPY28_RS16390 PF17854 FtsK alpha domain GPY28_RS16390 PF01580 FtsK/SpoIIIE family GPY28_RS16390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GPY28_RS16395 PF03548 Outer membrane lipoprotein carrier protein LolA GPY28_RS16400 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS16400 PF12002 MgsA AAA+ ATPase C terminal GPY28_RS16400 PF16193 AAA C-terminal domain GPY28_RS16405 PF02403 Seryl-tRNA synthetase N-terminal domain GPY28_RS16405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY28_RS16420 PF01258 Prokaryotic dksA/traR C4-type zinc finger GPY28_RS16425 PF00202 Aminotransferase class-III GPY28_RS16430 PF04055 Radical SAM superfamily GPY28_RS16430 PF06968 Biotin and Thiamin Synthesis associated domain GPY28_RS16435 PF00155 Aminotransferase class I and II GPY28_RS16440 PF08241 Methyltransferase domain GPY28_RS16455 PF01435 Peptidase family M48 GPY28_RS16465 PF00106 short chain dehydrogenase GPY28_RS16490 PF16036 Chalcone isomerase-like GPY28_RS16500 PF08328 Adenylosuccinate lyase C-terminal GPY28_RS16500 PF00206 Lyase GPY28_RS16505 PF04356 Protein of unknown function (DUF489) GPY28_RS16520 PF00294 pfkB family carbohydrate kinase GPY28_RS16525 PF00816 H-NS histone family GPY28_RS16530 PF03553 Na+/H+ antiporter family GPY28_RS16535 PF01634 ATP phosphoribosyltransferase GPY28_RS16535 PF08029 HisG, C-terminal domain GPY28_RS16540 PF00815 Histidinol dehydrogenase GPY28_RS16545 PF00155 Aminotransferase class I and II GPY28_RS16550 PF00475 Imidazoleglycerol-phosphate dehydratase GPY28_RS16550 PF08645 Polynucleotide kinase 3 phosphatase GPY28_RS16555 PF00117 Glutamine amidotransferase class-I GPY28_RS16560 PF00977 Histidine biosynthesis protein GPY28_RS16565 PF00977 Histidine biosynthesis protein GPY28_RS16570 PF01502 Phosphoribosyl-AMP cyclohydrolase GPY28_RS16570 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GPY28_RS16575 PF02810 SEC-C motif GPY28_RS16580 PF08668 HDOD domain GPY28_RS16580 PF00563 EAL domain GPY28_RS16585 PF00149 Calcineurin-like phosphoesterase GPY28_RS16590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY28_RS16595 PF01406 tRNA synthetases class I (C) catalytic domain GPY28_RS16595 PF09190 DALR domain GPY28_RS16600 PF00265 Thymidine kinase GPY28_RS16605 PF02698 DUF218 domain GPY28_RS16630 PF01226 Formate/nitrite transporter GPY28_RS16640 PF03649 Uncharacterised protein family (UPF0014) GPY28_RS16645 PF06796 Periplasmic nitrate reductase protein NapE GPY28_RS16650 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY28_RS16655 PF01568 Molydopterin dinucleotide binding domain GPY28_RS16655 PF18364 Molybdopterin oxidoreductase N-terminal domain GPY28_RS16655 PF00384 Molybdopterin oxidoreductase GPY28_RS16660 PF16875 Glycosyl hydrolase family 36 N-terminal domain GPY28_RS16660 PF16874 Glycosyl hydrolase family 36 C-terminal domain GPY28_RS16670 PF01368 DHH family GPY28_RS16670 PF02833 DHHA2 domain GPY28_RS16680 PF00005 ABC transporter GPY28_RS16685 PF00005 ABC transporter GPY28_RS16685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS16690 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS16690 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY28_RS16695 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS16700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS16705 PF00158 Sigma-54 interaction domain GPY28_RS16705 PF02954 Bacterial regulatory protein, Fis family GPY28_RS16710 PF04012 PspA/IM30 family GPY28_RS16715 PF06667 Phage shock protein B GPY28_RS16720 PF04024 PspC domain GPY28_RS16730 PF13533 Biotin-lipoyl like GPY28_RS16735 PF00873 AcrB/AcrD/AcrF family GPY28_RS16740 PF03352 Methyladenine glycosylase GPY28_RS16745 PF03280 Proteobacterial lipase chaperone protein GPY28_RS16750 PF00561 alpha/beta hydrolase fold GPY28_RS16755 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY28_RS16760 PF13091 PLD-like domain GPY28_RS16760 PF13396 Phospholipase_D-nuclease N-terminal GPY28_RS16765 PF00209 Sodium:neurotransmitter symporter family GPY28_RS16770 PF00849 RNA pseudouridylate synthase GPY28_RS16780 PF00970 Oxidoreductase FAD-binding domain GPY28_RS16780 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY28_RS16780 PF00175 Oxidoreductase NAD-binding domain GPY28_RS16785 PF03063 Prismane/CO dehydrogenase family GPY28_RS16790 PF00158 Sigma-54 interaction domain GPY28_RS16790 PF01590 GAF domain GPY28_RS16805 PF01066 CDP-alcohol phosphatidyltransferase GPY28_RS16810 PF00005 ABC transporter GPY28_RS16815 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS16820 PF13416 Bacterial extracellular solute-binding protein GPY28_RS16830 PF06945 Protein of unknown function (DUF1289) GPY28_RS16845 PF02872 5'-nucleotidase, C-terminal domain GPY28_RS16845 PF00149 Calcineurin-like phosphoesterase GPY28_RS16855 PF01386 Ribosomal L25p family GPY28_RS16860 PF00672 HAMP domain GPY28_RS16860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS16860 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS16865 PF00072 Response regulator receiver domain GPY28_RS16865 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS16875 PF04851 Type III restriction enzyme, res subunit GPY28_RS16875 PF00271 Helicase conserved C-terminal domain GPY28_RS16880 PF01479 S4 domain GPY28_RS16880 PF00849 RNA pseudouridylate synthase GPY28_RS16885 PF07690 Major Facilitator Superfamily GPY28_RS16895 PF11066 Protein of unknown function (DUF2867) GPY28_RS16895 PF13460 NAD(P)H-binding GPY28_RS16900 PF01554 MatE GPY28_RS16905 PF00005 ABC transporter GPY28_RS16920 PF06965 Na+/H+ antiporter 1 GPY28_RS16925 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS16925 PF16295 Tetracyclin repressor-like, C-terminal domain GPY28_RS16930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY28_RS16930 PF02770 Acyl-CoA dehydrogenase, middle domain GPY28_RS16930 PF09317 Domain of unknown function (DUF1974) GPY28_RS16930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY28_RS16935 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY28_RS16935 PF07055 Enoyl reductase FAD binding domain GPY28_RS16935 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY28_RS16940 PF02080 TrkA-C domain GPY28_RS16940 PF06826 Predicted Permease Membrane Region GPY28_RS16945 PF00462 Glutaredoxin GPY28_RS16950 PF00465 Iron-containing alcohol dehydrogenase GPY28_RS16955 PF01418 Helix-turn-helix domain, rpiR family GPY28_RS16955 PF01380 SIS domain GPY28_RS16960 PF00282 Pyridoxal-dependent decarboxylase conserved domain GPY28_RS16970 PF03956 Lysine exporter LysO GPY28_RS16985 PF04993 TfoX N-terminal domain GPY28_RS16985 PF04994 TfoX C-terminal domain GPY28_RS17000 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS17000 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS17010 PF00266 Aminotransferase class-V GPY28_RS17015 PF00291 Pyridoxal-phosphate dependent enzyme GPY28_RS17020 PF00005 ABC transporter GPY28_RS17020 PF00664 ABC transporter transmembrane region GPY28_RS17025 PF00664 ABC transporter transmembrane region GPY28_RS17025 PF00005 ABC transporter GPY28_RS17030 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS17040 PF00266 Aminotransferase class-V GPY28_RS17050 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS17050 PF00072 Response regulator receiver domain GPY28_RS17055 PF00939 Sodium:sulfate symporter transmembrane region GPY28_RS17060 PF02698 DUF218 domain GPY28_RS17065 PF03949 Malic enzyme, NAD binding domain GPY28_RS17065 PF00390 Malic enzyme, N-terminal domain GPY28_RS17080 PF09423 PhoD-like phosphatase GPY28_RS17080 PF16655 PhoD-like phosphatase, N-terminal domain GPY28_RS17085 PF01259 SAICAR synthetase GPY28_RS17180 PF00691 OmpA family GPY28_RS17180 PF05736 OprF membrane domain GPY28_RS17195 PF01565 FAD binding domain GPY28_RS17195 PF02913 FAD linked oxidases, C-terminal domain GPY28_RS17195 PF13183 4Fe-4S dicluster domain GPY28_RS17200 PF04191 Phospholipid methyltransferase GPY28_RS17210 PF00221 Aromatic amino acid lyase GPY28_RS17215 PF17391 Urocanase N-terminal domain GPY28_RS17215 PF17392 Urocanase C-terminal domain GPY28_RS17215 PF01175 Urocanase Rossmann-like domain GPY28_RS17220 PF00491 Arginase family GPY28_RS17225 PF01979 Amidohydrolase family GPY28_RS17230 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS17230 PF07702 UTRA domain GPY28_RS17245 PF03129 Anticodon binding domain GPY28_RS17245 PF02824 TGS domain GPY28_RS17245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY28_RS17245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY28_RS17250 PF00707 Translation initiation factor IF-3, C-terminal domain GPY28_RS17250 PF05198 Translation initiation factor IF-3, N-terminal domain GPY28_RS17255 PF01632 Ribosomal protein L35 GPY28_RS17260 PF00453 Ribosomal protein L20 GPY28_RS17265 PF01906 Putative heavy-metal-binding GPY28_RS17300 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GPY28_RS17300 PF01409 tRNA synthetases class II core domain (F) GPY28_RS17305 PF01588 Putative tRNA binding domain GPY28_RS17305 PF03484 tRNA synthetase B5 domain GPY28_RS17305 PF03483 B3/4 domain GPY28_RS17305 PF03147 Ferredoxin-fold anticodon binding domain GPY28_RS17305 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GPY28_RS17315 PF00216 Bacterial DNA-binding protein GPY28_RS17325 PF05724 Thiopurine S-methyltransferase (TPMT) GPY28_RS17330 PF02222 ATP-grasp domain GPY28_RS17335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY28_RS17335 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GPY28_RS17340 PF04172 LrgB-like family GPY28_RS17345 PF03788 LrgA family GPY28_RS17350 PF00929 Exonuclease GPY28_RS17350 PF08411 Exonuclease C-terminal GPY28_RS17360 PF13460 NAD(P)H-binding GPY28_RS17365 PF02277 Phosphoribosyltransferase GPY28_RS17370 PF02654 Cobalamin-5-phosphate synthase GPY28_RS17375 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GPY28_RS17390 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GPY28_RS17395 PF01032 FecCD transport family GPY28_RS17400 PF00005 ABC transporter GPY28_RS17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS17420 PF03466 LysR substrate binding domain GPY28_RS17430 PF01863 Protein of unknown function DUF45 GPY28_RS17455 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS17460 PF00171 Aldehyde dehydrogenase family GPY28_RS17465 PF05544 Proline racemase GPY28_RS17470 PF01266 FAD dependent oxidoreductase GPY28_RS17470 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GPY28_RS17480 PF02423 Ornithine cyclodeaminase/mu-crystallin family GPY28_RS17485 PF00701 Dihydrodipicolinate synthetase family GPY28_RS17490 PF00005 ABC transporter GPY28_RS17490 PF08402 TOBE domain GPY28_RS17495 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS17500 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS17510 PF01752 Collagenase GPY28_RS17510 PF08453 Peptidase family M9 N-terminal GPY28_RS17520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS17520 PF00005 ABC transporter GPY28_RS17525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS17525 PF00005 ABC transporter GPY28_RS17530 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS17530 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY28_RS17535 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS17540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS17545 PF01546 Peptidase family M20/M25/M40 GPY28_RS17545 PF07687 Peptidase dimerisation domain GPY28_RS17550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY28_RS17555 PF04209 homogentisate 1,2-dioxygenase GPY28_RS17565 PF14497 Glutathione S-transferase, C-terminal domain GPY28_RS17565 PF02798 Glutathione S-transferase, N-terminal domain GPY28_RS17615 PF07007 Lysozyme inhibitor LprI GPY28_RS17640 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GPY28_RS17655 PF03553 Na+/H+ antiporter family GPY28_RS17660 PF00120 Glutamine synthetase, catalytic domain GPY28_RS17670 PF07722 Peptidase C26 GPY28_RS17675 PF01381 Helix-turn-helix GPY28_RS17675 PF07883 Cupin domain GPY28_RS17680 PF00171 Aldehyde dehydrogenase family GPY28_RS17685 PF01266 FAD dependent oxidoreductase GPY28_RS17690 PF00795 Carbon-nitrogen hydrolase GPY28_RS17695 PF04371 Porphyromonas-type peptidyl-arginine deiminase GPY28_RS17700 PF00171 Aldehyde dehydrogenase family GPY28_RS17705 PF00202 Aminotransferase class-III GPY28_RS17710 PF12792 CSS motif domain associated with EAL GPY28_RS17710 PF00563 EAL domain GPY28_RS17720 PF01047 MarR family GPY28_RS17725 PF04237 YjbR GPY28_RS17750 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS17750 PF00672 HAMP domain GPY28_RS17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS17750 PF01627 Hpt domain GPY28_RS17750 PF00072 Response regulator receiver domain GPY28_RS17750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY28_RS17755 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS17755 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS17755 PF00563 EAL domain GPY28_RS17770 PF04204 Homoserine O-succinyltransferase GPY28_RS17780 PF00893 Small Multidrug Resistance protein GPY28_RS17785 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY28_RS17790 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GPY28_RS17795 PF01810 LysE type translocator GPY28_RS17805 PF01235 Sodium:alanine symporter family GPY28_RS17830 PF00884 Sulfatase GPY28_RS17835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GPY28_RS17840 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS17845 PF00005 ABC transporter GPY28_RS17845 PF00571 CBS domain GPY28_RS17860 PF02028 BCCT, betaine/carnitine/choline family transporter GPY28_RS17865 PF00583 Acetyltransferase (GNAT) family GPY28_RS17870 PF00202 Aminotransferase class-III GPY28_RS17875 PF06339 Ectoine synthase GPY28_RS17880 PF00696 Amino acid kinase family GPY28_RS17880 PF13840 ACT domain GPY28_RS17885 PF00884 Sulfatase GPY28_RS17895 PF03781 Sulfatase-modifying factor enzyme 1 GPY28_RS17900 PF13186 Iron-sulfur cluster-binding domain GPY28_RS17900 PF04055 Radical SAM superfamily GPY28_RS17915 PF00884 Sulfatase GPY28_RS17920 PF00884 Sulfatase GPY28_RS17930 PF00005 ABC transporter GPY28_RS17930 PF00664 ABC transporter transmembrane region GPY28_RS17930 PF03412 Peptidase C39 family GPY28_RS17940 PF02321 Outer membrane efflux protein GPY28_RS17955 PF08220 DeoR-like helix-turn-helix domain GPY28_RS17955 PF00455 DeoR C terminal sensor domain GPY28_RS17960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GPY28_RS17960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY28_RS17965 PF03928 Haem-degrading GPY28_RS17970 PF00072 Response regulator receiver domain GPY28_RS17970 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS17990 PF00939 Sodium:sulfate symporter transmembrane region GPY28_RS17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS17995 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS18000 PF02954 Bacterial regulatory protein, Fis family GPY28_RS18000 PF00158 Sigma-54 interaction domain GPY28_RS18000 PF00072 Response regulator receiver domain GPY28_RS18005 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS18005 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS18005 PF00563 EAL domain GPY28_RS18010 PF11871 Domain of unknown function (DUF3391) GPY28_RS18010 PF01966 HD domain GPY28_RS18015 PF01810 LysE type translocator GPY28_RS18020 PF11230 Protein of unknown function (DUF3029) GPY28_RS18025 PF04055 Radical SAM superfamily GPY28_RS18035 PF03741 Integral membrane protein TerC family GPY28_RS18045 PF01966 HD domain GPY28_RS18050 PF00465 Iron-containing alcohol dehydrogenase GPY28_RS18055 PF03222 Tryptophan/tyrosine permease family GPY28_RS18060 PF01966 HD domain GPY28_RS18060 PF11871 Domain of unknown function (DUF3391) GPY28_RS18070 PF00005 ABC transporter GPY28_RS18075 PF01497 Periplasmic binding protein GPY28_RS18080 PF01032 FecCD transport family GPY28_RS18095 PF00005 ABC transporter GPY28_RS18095 PF00664 ABC transporter transmembrane region GPY28_RS18100 PF00664 ABC transporter transmembrane region GPY28_RS18100 PF00005 ABC transporter GPY28_RS18105 PF08334 Type II secretion system (T2SS), protein G GPY28_RS18105 PF07963 Prokaryotic N-terminal methylation motif GPY28_RS18115 PF03466 LysR substrate binding domain GPY28_RS18115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS18120 PF03992 Antibiotic biosynthesis monooxygenase GPY28_RS18125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY28_RS18125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GPY28_RS18140 PF00012 Hsp70 protein GPY28_RS18145 PF00012 Hsp70 protein GPY28_RS18190 PF02525 Flavodoxin-like fold GPY28_RS18195 PF00271 Helicase conserved C-terminal domain GPY28_RS18195 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GPY28_RS18195 PF04408 Helicase associated domain (HA2) GPY28_RS18195 PF11898 Domain of unknown function (DUF3418) GPY28_RS18195 PF00270 DEAD/DEAH box helicase GPY28_RS18210 PF02028 BCCT, betaine/carnitine/choline family transporter GPY28_RS18220 PF02397 Bacterial sugar transferase GPY28_RS18230 PF13439 Glycosyltransferase Family 4 GPY28_RS18230 PF00534 Glycosyl transferases group 1 GPY28_RS18260 PF00534 Glycosyl transferases group 1 GPY28_RS18260 PF13439 Glycosyltransferase Family 4 GPY28_RS18265 PF00534 Glycosyl transferases group 1 GPY28_RS18265 PF13439 Glycosyltransferase Family 4 GPY28_RS18270 PF00158 Sigma-54 interaction domain GPY28_RS18270 PF00072 Response regulator receiver domain GPY28_RS18270 PF02954 Bacterial regulatory protein, Fis family GPY28_RS18285 PF10531 SLBB domain GPY28_RS18285 PF02563 Polysaccharide biosynthesis/export protein GPY28_RS18295 PF01740 STAS domain GPY28_RS18300 PF14743 DNA ligase OB-like domain GPY28_RS18300 PF01068 ATP dependent DNA ligase domain GPY28_RS18310 PF01554 MatE GPY28_RS18315 PF00677 Lumazine binding domain GPY28_RS18330 PF00072 Response regulator receiver domain GPY28_RS18330 PF01339 CheB methylesterase GPY28_RS18335 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS18335 PF05230 MASE2 domain GPY28_RS18345 PF00877 NlpC/P60 family GPY28_RS18380 PF00480 ROK family GPY28_RS18390 PF03453 MoeA N-terminal region (domain I and II) GPY28_RS18390 PF00994 Probable molybdopterin binding domain GPY28_RS18390 PF03454 MoeA C-terminal region (domain IV) GPY28_RS18395 PF12804 MobA-like NTP transferase domain GPY28_RS18400 PF08402 TOBE domain GPY28_RS18400 PF00005 ABC transporter GPY28_RS18405 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS18410 PF12849 PBP superfamily domain GPY28_RS18415 PF02954 Bacterial regulatory protein, Fis family GPY28_RS18415 PF00158 Sigma-54 interaction domain GPY28_RS18415 PF00072 Response regulator receiver domain GPY28_RS18420 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS18430 PF12848 ABC transporter GPY28_RS18430 PF00005 ABC transporter GPY28_RS18435 PF02634 FdhD/NarQ family GPY28_RS18455 PF02613 Nitrate reductase delta subunit GPY28_RS18465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY28_RS18465 PF00384 Molybdopterin oxidoreductase GPY28_RS18465 PF01568 Molydopterin dinucleotide binding domain GPY28_RS18470 PF13247 4Fe-4S dicluster domain GPY28_RS18585 PF00909 Ammonium Transporter Family GPY28_RS18590 PF02146 Sir2 family GPY28_RS18595 PF13416 Bacterial extracellular solute-binding protein GPY28_RS18600 PF13416 Bacterial extracellular solute-binding protein GPY28_RS18605 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS18610 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS18615 PF00005 ABC transporter GPY28_RS18615 PF08402 TOBE domain GPY28_RS18635 PF01171 PP-loop family GPY28_RS18640 PF00582 Universal stress protein family GPY28_RS18645 PF00027 Cyclic nucleotide-binding domain GPY28_RS18645 PF13545 Crp-like helix-turn-helix domain GPY28_RS18660 PF00403 Heavy-metal-associated domain GPY28_RS18670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY28_RS18670 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GPY28_RS18685 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY28_RS18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS18700 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS18700 PF09308 LuxQ, periplasmic GPY28_RS18700 PF00072 Response regulator receiver domain GPY28_RS18855 PF17414 MatP C-terminal ribbon-helix-helix domain GPY28_RS18855 PF06303 MatP N-terminal domain GPY28_RS18860 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY28_RS18860 PF13654 AAA domain GPY28_RS18865 PF07977 FabA-like domain GPY28_RS18870 PF04957 Ribosome modulation factor GPY28_RS18880 PF00005 ABC transporter GPY28_RS18880 PF12848 ABC transporter GPY28_RS18880 PF16326 ABC transporter C-terminal domain GPY28_RS18890 PF01170 Putative RNA methylase family UPF0020 GPY28_RS18890 PF02926 THUMP domain GPY28_RS18890 PF10672 S-adenosylmethionine-dependent methyltransferase GPY28_RS18895 PF07126 Cell-division protein ZapC GPY28_RS18900 PF01180 Dihydroorotate dehydrogenase GPY28_RS18905 PF05088 Bacterial NAD-glutamate dehydrogenase GPY28_RS18915 PF01433 Peptidase family M1 domain GPY28_RS18915 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GPY28_RS18915 PF11940 Domain of unknown function (DUF3458) Ig-like fold GPY28_RS18925 PF00595 PDZ domain GPY28_RS18925 PF17804 Tail specific protease N-terminal domain GPY28_RS18925 PF11818 C-terminal domain of tail specific protease (DUF3340) GPY28_RS18925 PF03572 Peptidase family S41 GPY28_RS18930 PF04352 ProQ/FINO family GPY28_RS18930 PF17516 ProQ C-terminal domain GPY28_RS18935 PF13185 GAF domain GPY28_RS18940 PF00664 ABC transporter transmembrane region GPY28_RS18940 PF00005 ABC transporter GPY28_RS18945 PF04403 Paraquat-inducible protein A GPY28_RS18950 PF02470 MlaD protein GPY28_RS18955 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GPY28_RS18955 PF01189 16S rRNA methyltransferase RsmB/F GPY28_RS18955 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GPY28_RS18975 PF00793 DAHP synthetase I family GPY28_RS18980 PF04461 Protein of unknown function (DUF520) GPY28_RS18985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY28_RS18985 PF14824 Sirohaem biosynthesis protein central GPY28_RS18985 PF10414 Sirohaem synthase dimerisation region GPY28_RS18990 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS18995 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS19000 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS19005 PF00005 ABC transporter GPY28_RS19010 PF01027 Inhibitor of apoptosis-promoting Bax1 GPY28_RS19020 PF04358 DsrC like protein GPY28_RS19025 PF00708 Acylphosphatase GPY28_RS19030 PF00672 HAMP domain GPY28_RS19030 PF02743 Cache domain GPY28_RS19030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS19035 PF10672 S-adenosylmethionine-dependent methyltransferase GPY28_RS19035 PF17785 PUA-like domain GPY28_RS19050 PF00691 OmpA family GPY28_RS19065 PF00691 OmpA family GPY28_RS19065 PF05736 OprF membrane domain GPY28_RS19075 PF13185 GAF domain GPY28_RS19075 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS19080 PF09339 IclR helix-turn-helix domain GPY28_RS19080 PF01614 Bacterial transcriptional regulator GPY28_RS19090 PF00248 Aldo/keto reductase family GPY28_RS19095 PF03466 LysR substrate binding domain GPY28_RS19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS19105 PF03466 LysR substrate binding domain GPY28_RS19110 PF07690 Major Facilitator Superfamily GPY28_RS19125 PF02311 AraC-like ligand binding domain GPY28_RS19125 PF12833 Helix-turn-helix domain GPY28_RS19130 PF00857 Isochorismatase family GPY28_RS19135 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS19145 PF00107 Zinc-binding dehydrogenase GPY28_RS19145 PF08240 Alcohol dehydrogenase GroES-like domain GPY28_RS19150 PF02574 Homocysteine S-methyltransferase GPY28_RS19150 PF02310 B12 binding domain GPY28_RS19150 PF00809 Pterin binding enzyme GPY28_RS19150 PF02965 Vitamin B12 dependent methionine synthase, activation domain GPY28_RS19150 PF02607 B12 binding domain GPY28_RS19155 PF00005 ABC transporter GPY28_RS19160 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS19165 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY28_RS19175 PF00267 Gram-negative porin GPY28_RS19180 PF03466 LysR substrate binding domain GPY28_RS19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS19190 PF00873 AcrB/AcrD/AcrF family GPY28_RS19195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS19195 PF03466 LysR substrate binding domain GPY28_RS19200 PF03466 LysR substrate binding domain GPY28_RS19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS19205 PF01810 LysE type translocator GPY28_RS19215 PF06508 Queuosine biosynthesis protein QueC GPY28_RS19220 PF04055 Radical SAM superfamily GPY28_RS19235 PF00089 Trypsin GPY28_RS19245 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY28_RS19245 PF00501 AMP-binding enzyme GPY28_RS19245 PF13193 AMP-binding enzyme C-terminal domain GPY28_RS19250 PF04303 PrpF protein GPY28_RS19255 PF00330 Aconitase family (aconitate hydratase) GPY28_RS19255 PF00694 Aconitase C-terminal domain GPY28_RS19260 PF00285 Citrate synthase, C-terminal domain GPY28_RS19290 PF01970 Tripartite tricarboxylate transporter TctA family GPY28_RS19300 PF01925 Sulfite exporter TauE/SafE GPY28_RS19305 PF16868 NMT1-like family GPY28_RS19310 PF05844 YopD protein GPY28_RS19320 PF07720 Tetratricopeptide repeat GPY28_RS19325 PF04792 V antigen (LcrV) protein GPY28_RS19335 PF09621 Type III secretion system regulator (LcrR) GPY28_RS19340 PF00771 FHIPEP family GPY28_RS19360 PF09059 TyeA GPY28_RS19370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY28_RS19370 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY28_RS19370 PF18269 T3SS EscN ATPase C-terminal domain GPY28_RS19385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY28_RS19390 PF00813 FliP family GPY28_RS19395 PF01313 Bacterial export proteins, family 3 GPY28_RS19400 PF01311 Bacterial export proteins, family 1 GPY28_RS19405 PF01312 FlhB HrpN YscU SpaS Family GPY28_RS19410 PF12833 Helix-turn-helix domain GPY28_RS19410 PF12852 Cupin GPY28_RS19440 PF02661 Fic/DOC family GPY28_RS19450 PF02108 Flagellar assembly protein FliH GPY28_RS19460 PF01514 Secretory protein of YscJ/FliF family GPY28_RS19465 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI GPY28_RS19475 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) GPY28_RS19480 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GPY28_RS19490 PF16693 Inner membrane component of T3SS, periplasmic domain GPY28_RS19490 PF16697 Inner membrane component of T3SS, cytoplasmic domain GPY28_RS19510 PF12833 Helix-turn-helix domain GPY28_RS19530 PF00171 Aldehyde dehydrogenase family GPY28_RS19535 PF01590 GAF domain GPY28_RS19535 PF00158 Sigma-54 interaction domain GPY28_RS19535 PF02954 Bacterial regulatory protein, Fis family GPY28_RS19560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY28_RS19560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GPY28_RS19565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY28_RS19570 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GPY28_RS19570 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GPY28_RS19575 PF02311 AraC-like ligand binding domain GPY28_RS19575 PF12833 Helix-turn-helix domain GPY28_RS19580 PF00593 TonB dependent receptor GPY28_RS19580 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS19585 PF12431 Transcriptional regulator GPY28_RS19585 PF00072 Response regulator receiver domain GPY28_RS19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS19590 PF17203 Single cache domain 3 GPY28_RS19590 PF00989 PAS fold GPY28_RS19590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GPY28_RS19605 PF13533 Biotin-lipoyl like GPY28_RS19620 PF03466 LysR substrate binding domain GPY28_RS19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS19635 PF08543 Phosphomethylpyrimidine kinase GPY28_RS19640 PF00155 Aminotransferase class I and II GPY28_RS19645 PF06826 Predicted Permease Membrane Region GPY28_RS19645 PF02080 TrkA-C domain GPY28_RS19655 PF13533 Biotin-lipoyl like GPY28_RS19670 PF00135 Carboxylesterase family GPY28_RS19675 PF13091 PLD-like domain GPY28_RS19680 PF01103 Surface antigen GPY28_RS19680 PF17243 POTRA domain TamA domain 1 GPY28_RS19685 PF11008 Protein of unknown function (DUF2846) GPY28_RS19690 PF01810 LysE type translocator GPY28_RS19695 PF01810 LysE type translocator GPY28_RS19700 PF07237 Protein of unknown function (DUF1428) GPY28_RS19720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY28_RS19720 PF01411 tRNA synthetases class II (A) GPY28_RS19720 PF02272 DHHA1 domain GPY28_RS19725 PF13302 Acetyltransferase (GNAT) domain GPY28_RS19730 PF12464 Maltose acetyltransferase GPY28_RS19730 PF14602 Hexapeptide repeat of succinyl-transferase GPY28_RS19950 PF00857 Isochorismatase family GPY28_RS20115 PF01337 Barstar (barnase inhibitor) GPY28_RS20135 PF14552 Tautomerase enzyme GPY28_RS20140 PF00589 Phage integrase family GPY28_RS20140 PF13495 Phage integrase, N-terminal SAM-like domain GPY28_RS20155 PF13302 Acetyltransferase (GNAT) domain GPY28_RS20160 PF18024 Helix-turn-helix domain GPY28_RS20160 PF00158 Sigma-54 interaction domain GPY28_RS20165 PF05128 Domain of unknown function (DUF697) GPY28_RS20170 PF04317 YcjX-like family, DUF463 GPY28_RS20190 PF00425 chorismate binding enzyme GPY28_RS20190 PF04715 Anthranilate synthase component I, N terminal region GPY28_RS20195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS20195 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS20195 PF09308 LuxQ, periplasmic GPY28_RS20195 PF00072 Response regulator receiver domain GPY28_RS20205 PF00293 NUDIX domain GPY28_RS20210 PF03222 Tryptophan/tyrosine permease family GPY28_RS20215 PF03315 Serine dehydratase beta chain GPY28_RS20215 PF03313 Serine dehydratase alpha chain GPY28_RS20220 PF00563 EAL domain GPY28_RS20220 PF04940 Sensors of blue-light using FAD GPY28_RS20230 PF01242 6-pyruvoyl tetrahydropterin synthase GPY28_RS20235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS20235 PF00672 HAMP domain GPY28_RS20235 PF17200 Single Cache domain 2 GPY28_RS20240 PF00152 tRNA synthetases class II (D, K and N) GPY28_RS20240 PF01336 OB-fold nucleic acid binding domain GPY28_RS20250 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS20250 PF00155 Aminotransferase class I and II GPY28_RS20265 PF00155 Aminotransferase class I and II GPY28_RS20285 PF00672 HAMP domain GPY28_RS20285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS20290 PF02028 BCCT, betaine/carnitine/choline family transporter GPY28_RS20300 PF00072 Response regulator receiver domain GPY28_RS20300 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS20305 PF17200 Single Cache domain 2 GPY28_RS20305 PF07730 Histidine kinase GPY28_RS20310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY28_RS20320 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY28_RS20335 PF00753 Metallo-beta-lactamase superfamily GPY28_RS20340 PF05951 Bacterial protein of unknown function (DUF882) GPY28_RS20345 PF03734 L,D-transpeptidase catalytic domain GPY28_RS20345 PF01471 Putative peptidoglycan binding domain GPY28_RS20370 PF00925 GTP cyclohydrolase II GPY28_RS20380 PF03918 Cytochrome C biogenesis protein GPY28_RS20385 PF08534 Redoxin GPY28_RS20390 PF01578 Cytochrome C assembly protein GPY28_RS20390 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GPY28_RS20395 PF03916 Polysulphide reductase, NrfD GPY28_RS20400 PF13247 4Fe-4S dicluster domain GPY28_RS20410 PF02335 Cytochrome c552 GPY28_RS20425 PF00521 DNA gyrase/topoisomerase IV, subunit A GPY28_RS20425 PF03989 DNA gyrase C-terminal domain, beta-propeller GPY28_RS20435 PF00317 Ribonucleotide reductase, all-alpha domain GPY28_RS20435 PF03477 ATP cone domain GPY28_RS20435 PF02867 Ribonucleotide reductase, barrel domain GPY28_RS20440 PF00268 Ribonucleotide reductase, small chain GPY28_RS20450 PF00994 Probable molybdopterin binding domain GPY28_RS20465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GPY28_RS20470 PF16653 Saccharopine dehydrogenase C-terminal domain GPY28_RS20470 PF03435 Saccharopine dehydrogenase NADP binding domain GPY28_RS20475 PF00202 Aminotransferase class-III GPY28_RS20500 PF01066 CDP-alcohol phosphatidyltransferase GPY28_RS20505 PF02151 UvrB/uvrC motif GPY28_RS20505 PF08459 UvrC Helix-hairpin-helix N-terminal GPY28_RS20505 PF01541 GIY-YIG catalytic domain GPY28_RS20510 PF00072 Response regulator receiver domain GPY28_RS20510 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS20515 PF00136 DNA polymerase family B GPY28_RS20515 PF03104 DNA polymerase family B, exonuclease domain GPY28_RS20525 PF08207 Elongation factor P (EF-P) KOW-like domain GPY28_RS20525 PF09285 Elongation factor P, C-terminal GPY28_RS20525 PF01132 Elongation factor P (EF-P) OB domain GPY28_RS20530 PF04269 Protein of unknown function, DUF440 GPY28_RS20535 PF00849 RNA pseudouridylate synthase GPY28_RS20535 PF01479 S4 domain GPY28_RS20545 PF01300 Telomere recombination GPY28_RS20550 PF02811 PHP domain GPY28_RS20555 PF08056 Tryptophan operon leader peptide GPY28_RS20560 PF00425 chorismate binding enzyme GPY28_RS20560 PF04715 Anthranilate synthase component I, N terminal region GPY28_RS20565 PF00117 Glutamine amidotransferase class-I GPY28_RS20570 PF00591 Glycosyl transferase family, a/b domain GPY28_RS20570 PF02885 Glycosyl transferase family, helical bundle domain GPY28_RS20575 PF00218 Indole-3-glycerol phosphate synthase GPY28_RS20575 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GPY28_RS20580 PF00291 Pyridoxal-phosphate dependent enzyme GPY28_RS20585 PF00290 Tryptophan synthase alpha chain GPY28_RS20590 PF00027 Cyclic nucleotide-binding domain GPY28_RS20590 PF13545 Crp-like helix-turn-helix domain GPY28_RS20595 PF13193 AMP-binding enzyme C-terminal domain GPY28_RS20595 PF00501 AMP-binding enzyme GPY28_RS20600 PF00375 Sodium:dicarboxylate symporter family GPY28_RS20605 PF17327 Acyl homoserine lactone synthase GPY28_RS20610 PF00072 Response regulator receiver domain GPY28_RS20610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS20620 PF04279 Intracellular septation protein A GPY28_RS20625 PF03061 Thioesterase superfamily GPY28_RS20630 PF03795 YCII-related domain GPY28_RS20640 PF08267 Cobalamin-independent synthase, N-terminal domain GPY28_RS20640 PF01717 Cobalamin-independent synthase, Catalytic domain GPY28_RS20645 PF03466 LysR substrate binding domain GPY28_RS20645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS20660 PF08448 PAS fold GPY28_RS20660 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS20660 PF00563 EAL domain GPY28_RS20660 PF08447 PAS fold GPY28_RS20665 PF11842 Domain of unknown function (DUF3362) GPY28_RS20665 PF04055 Radical SAM superfamily GPY28_RS20665 PF08497 Radical SAM N-terminal GPY28_RS20690 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GPY28_RS20695 PF00535 Glycosyl transferase family 2 GPY28_RS20700 PF00072 Response regulator receiver domain GPY28_RS20700 PF00486 Transcriptional regulatory protein, C terminal GPY28_RS20705 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS20705 PF00672 HAMP domain GPY28_RS20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS20725 PF03466 LysR substrate binding domain GPY28_RS20725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS20730 PF00529 HlyD membrane-fusion protein of T1SS GPY28_RS20730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS20740 PF01717 Cobalamin-independent synthase, Catalytic domain GPY28_RS20740 PF08267 Cobalamin-independent synthase, N-terminal domain GPY28_RS20760 PF02687 FtsX-like permease family GPY28_RS20760 PF12704 MacB-like periplasmic core domain GPY28_RS20760 PF00005 ABC transporter GPY28_RS20765 PF12704 MacB-like periplasmic core domain GPY28_RS20765 PF02687 FtsX-like permease family GPY28_RS20765 PF00005 ABC transporter GPY28_RS20770 PF12704 MacB-like periplasmic core domain GPY28_RS20770 PF00005 ABC transporter GPY28_RS20770 PF02687 FtsX-like permease family GPY28_RS20780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY28_RS20795 PF05958 tRNA (Uracil-5-)-methyltransferase GPY28_RS20805 PF00085 Thioredoxin GPY28_RS20810 PF11412 Disulphide bond corrector protein DsbC GPY28_RS20810 PF02683 Cytochrome C biogenesis protein transmembrane region GPY28_RS20820 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS20820 PF00072 Response regulator receiver domain GPY28_RS20825 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS20830 PF13247 4Fe-4S dicluster domain GPY28_RS20835 PF03916 Polysulphide reductase, NrfD GPY28_RS20840 PF01568 Molydopterin dinucleotide binding domain GPY28_RS20840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY28_RS20840 PF00384 Molybdopterin oxidoreductase GPY28_RS20845 PF00034 Cytochrome c GPY28_RS20850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY28_RS20855 PF04403 Paraquat-inducible protein A GPY28_RS20860 PF02470 MlaD protein GPY28_RS20880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS20885 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GPY28_RS20890 PF18073 Rubredoxin metal binding domain GPY28_RS20895 PF06305 Lipopolysaccharide assembly protein A domain GPY28_RS20900 PF00216 Bacterial DNA-binding protein GPY28_RS20905 PF00575 S1 RNA binding domain GPY28_RS20910 PF02224 Cytidylate kinase GPY28_RS20915 PF01343 Peptidase family S49 GPY28_RS20915 PF08496 Peptidase family S49 N-terminal GPY28_RS20920 PF00106 short chain dehydrogenase GPY28_RS20935 PF01336 OB-fold nucleic acid binding domain GPY28_RS20935 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY28_RS20935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY28_RS20935 PF14579 Helix-hairpin-helix motif GPY28_RS20935 PF02811 PHP domain GPY28_RS20940 PF00072 Response regulator receiver domain GPY28_RS20940 PF01584 CheW-like domain GPY28_RS20945 PF00480 ROK family GPY28_RS20950 PF02887 Pyruvate kinase, alpha/beta domain GPY28_RS20950 PF00224 Pyruvate kinase, barrel domain GPY28_RS20955 PF01734 Patatin-like phospholipase GPY28_RS20970 PF00209 Sodium:neurotransmitter symporter family GPY28_RS20985 PF02378 Phosphotransferase system, EIIC GPY28_RS20985 PF00367 phosphotransferase system, EIIB GPY28_RS20990 PF01026 TatD related DNase GPY28_RS20995 PF09115 DNA polymerase III, delta subunit, C terminal GPY28_RS21000 PF02223 Thymidylate kinase GPY28_RS21005 PF02618 YceG-like family GPY28_RS21010 PF01063 Amino-transferase class IV GPY28_RS21015 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY28_RS21015 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY28_RS21020 PF00550 Phosphopantetheine attachment site GPY28_RS21030 PF00698 Acyl transferase domain GPY28_RS21035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY28_RS21035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY28_RS21040 PF02504 Fatty acid synthesis protein GPY28_RS21045 PF01783 Ribosomal L32p protein family GPY28_RS21050 PF02620 Large ribosomal RNA subunit accumulation protein YceD GPY28_RS21055 PF02545 Maf-like protein GPY28_RS21060 PF01479 S4 domain GPY28_RS21060 PF00849 RNA pseudouridylate synthase GPY28_RS21065 PF00575 S1 RNA binding domain GPY28_RS21065 PF12111 Polyribonucleotide phosphorylase C terminal GPY28_RS21065 PF10150 Ribonuclease E/G family GPY28_RS21070 PF01740 STAS domain GPY28_RS21070 PF00916 Sulfate permease family GPY28_RS21075 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY28_RS21080 PF12557 Cob(I)alamin adenosyltransferase N terminal GPY28_RS21080 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GPY28_RS21090 PF00485 Phosphoribulokinase / Uridine kinase family GPY28_RS21095 PF10609 NUBPL iron-transfer P-loop NTPase GPY28_RS21100 PF01588 Putative tRNA binding domain GPY28_RS21100 PF09334 tRNA synthetases class I (M) GPY28_RS21125 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS21125 PF07840 FadR C-terminal domain GPY28_RS21130 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GPY28_RS21135 PF02600 Disulfide bond formation protein DsbB GPY28_RS21140 PF03695 Uncharacterised protein family (UPF0149) GPY28_RS21140 PF02810 SEC-C motif GPY28_RS21145 PF01207 Dihydrouridine synthase (Dus) GPY28_RS21150 PF17158 Membrane-associated sensor, integral membrane domain GPY28_RS21150 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS21155 PF00128 Alpha amylase, catalytic domain GPY28_RS21155 PF02903 Alpha amylase, N-terminal ig-like domain GPY28_RS21160 PF00005 ABC transporter GPY28_RS21165 PF02653 Branched-chain amino acid transport system / permease component GPY28_RS21175 PF04217 Protein of unknown function, DUF412 GPY28_RS21180 PF00871 Acetokinase family GPY28_RS21185 PF07085 DRTGG domain GPY28_RS21185 PF01515 Phosphate acetyl/butaryl transferase GPY28_RS21195 PF13409 Glutathione S-transferase, N-terminal domain GPY28_RS21200 PF00005 ABC transporter GPY28_RS21200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS21205 PF00005 ABC transporter GPY28_RS21205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS21210 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS21210 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY28_RS21215 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS21220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS21225 PF02391 MoaE protein GPY28_RS21230 PF02597 ThiS family GPY28_RS21235 PF01967 MoaC family GPY28_RS21240 PF00994 Probable molybdopterin binding domain GPY28_RS21245 PF06463 Molybdenum Cofactor Synthesis C GPY28_RS21245 PF04055 Radical SAM superfamily GPY28_RS21250 PF01933 Uncharacterised protein family UPF0052 GPY28_RS21255 PF01627 Hpt domain GPY28_RS21260 PF00158 Sigma-54 interaction domain GPY28_RS21260 PF00072 Response regulator receiver domain GPY28_RS21260 PF02954 Bacterial regulatory protein, Fis family GPY28_RS21265 PF00271 Helicase conserved C-terminal domain GPY28_RS21265 PF12344 Ultra-violet resistance protein B GPY28_RS21265 PF04851 Type III restriction enzyme, res subunit GPY28_RS21265 PF02151 UvrB/uvrC motif GPY28_RS21265 PF17757 UvrB interaction domain GPY28_RS21275 PF01228 Glycine radical GPY28_RS21275 PF02901 Pyruvate formate lyase-like GPY28_RS21280 PF02508 Rnf-Nqr subunit, membrane protein GPY28_RS21285 PF04060 Putative Fe-S cluster GPY28_RS21290 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GPY28_RS21290 PF12838 4Fe-4S dicluster domain GPY28_RS21290 PF13375 RnfC Barrel sandwich hybrid domain GPY28_RS21290 PF10531 SLBB domain GPY28_RS21295 PF03116 NQR2, RnfD, RnfE family GPY28_RS21300 PF04205 FMN-binding domain GPY28_RS21305 PF02508 Rnf-Nqr subunit, membrane protein GPY28_RS21310 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY28_RS21310 PF00633 Helix-hairpin-helix motif GPY28_RS21310 PF10576 Iron-sulfur binding domain of endonuclease III GPY28_RS21315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY28_RS21320 PF10952 Protein of unknown function (DUF2753) GPY28_RS21325 PF00691 OmpA family GPY28_RS21325 PF18393 MotY N-terminal domain GPY28_RS21335 PF00929 Exonuclease GPY28_RS21340 PF13726 Na+-H+ antiporter family GPY28_RS21340 PF03553 Na+/H+ antiporter family GPY28_RS21425 PF01258 Prokaryotic dksA/traR C4-type zinc finger GPY28_RS21490 PF05840 Bacteriophage replication gene A protein (GPA) GPY28_RS21510 PF06892 Phage regulatory protein CII (CP76) GPY28_RS21535 PF13188 PAS domain GPY28_RS21535 PF13426 PAS domain GPY28_RS21535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS21545 PF00145 C-5 cytosine-specific DNA methylase GPY28_RS21550 PF02899 Phage integrase, N-terminal SAM-like domain GPY28_RS21550 PF00589 Phage integrase family GPY28_RS21565 PF00462 Glutaredoxin GPY28_RS21570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GPY28_RS21570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GPY28_RS21585 PF00171 Aldehyde dehydrogenase family GPY28_RS21585 PF00465 Iron-containing alcohol dehydrogenase GPY28_RS21590 PF01914 MarC family integral membrane protein GPY28_RS21595 PF00027 Cyclic nucleotide-binding domain GPY28_RS21595 PF00520 Ion transport protein GPY28_RS21600 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY28_RS21600 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY28_RS21605 PF03553 Na+/H+ antiporter family GPY28_RS21620 PF04245 37-kD nucleoid-associated bacterial protein GPY28_RS21625 PF07208 Protein of unknown function (DUF1414) GPY28_RS21630 PF11893 Domain of unknown function (DUF3413) GPY28_RS21630 PF00884 Sulfatase GPY28_RS21640 PF00850 Histone deacetylase domain GPY28_RS21645 PF00106 short chain dehydrogenase GPY28_RS21655 PF01751 Toprim domain GPY28_RS21655 PF01131 DNA topoisomerase GPY28_RS21660 PF00881 Nitroreductase family GPY28_RS21670 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS21670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY28_RS21675 PF01343 Peptidase family S49 GPY28_RS21680 PF17763 Glutaminase/Asparaginase C-terminal domain GPY28_RS21680 PF00710 Asparaginase, N-terminal GPY28_RS21685 PF07023 Protein of unknown function (DUF1315) GPY28_RS21695 PF01641 SelR domain GPY28_RS21700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY28_RS21700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY28_RS21705 PF01263 Aldose 1-epimerase GPY28_RS21710 PF08447 PAS fold GPY28_RS21710 PF13426 PAS domain GPY28_RS21710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS21715 PF13847 Methyltransferase domain GPY28_RS21735 PF00245 Alkaline phosphatase GPY28_RS21745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY28_RS21750 PF03992 Antibiotic biosynthesis monooxygenase GPY28_RS21755 PF00924 Mechanosensitive ion channel GPY28_RS21755 PF05552 Conserved TM helix GPY28_RS21810 PF03692 Putative zinc- or iron-chelating domain GPY28_RS21815 PF04226 Transglycosylase associated protein GPY28_RS21820 PF03692 Putative zinc- or iron-chelating domain GPY28_RS21825 PF00230 Major intrinsic protein GPY28_RS21830 PF13662 Toprim domain GPY28_RS21830 PF02132 RecR protein GPY28_RS21835 PF02575 YbaB/EbfC DNA-binding family GPY28_RS21840 PF12169 DNA polymerase III subunits gamma and tau domain III GPY28_RS21840 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GPY28_RS21840 PF12170 DNA polymerase III tau subunit V interacting with alpha GPY28_RS21845 PF00156 Phosphoribosyl transferase domain GPY28_RS21850 PF04304 Protein of unknown function (DUF454) GPY28_RS21860 PF00072 Response regulator receiver domain GPY28_RS21865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS21865 PF03466 LysR substrate binding domain GPY28_RS21870 PF00156 Phosphoribosyl transferase domain GPY28_RS21875 PF02674 Colicin V production protein GPY28_RS21880 PF05036 Sporulation related domain GPY28_RS21885 PF08245 Mur ligase middle domain GPY28_RS21885 PF02875 Mur ligase family, glutamate ligase domain GPY28_RS21890 PF17848 Acetyl-coA carboxylase zinc finger domain GPY28_RS21890 PF01039 Carboxyl transferase domain GPY28_RS21895 PF01416 tRNA pseudouridine synthase GPY28_RS21905 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY28_RS21905 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY28_RS21910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY28_RS21910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY28_RS21910 PF11890 Domain of unknown function (DUF3410) GPY28_RS21915 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY28_RS21915 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY28_RS21920 PF01266 FAD dependent oxidoreductase GPY28_RS21920 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GPY28_RS21925 PF03358 NADPH-dependent FMN reductase GPY28_RS21930 PF08891 YfcL protein GPY28_RS21935 PF04315 Elongation factor P hydroxylase GPY28_RS21945 PF03458 UPF0126 domain GPY28_RS21950 PF01264 Chorismate synthase GPY28_RS21955 PF05175 Methyltransferase small domain GPY28_RS21960 PF01713 Smr domain GPY28_RS21965 PF00300 Histidine phosphatase superfamily (branch 1) GPY28_RS21970 PF05193 Peptidase M16 inactive domain GPY28_RS21970 PF16187 Middle or third domain of peptidase_M16 GPY28_RS21970 PF00675 Insulinase (Peptidase family M16) GPY28_RS21980 PF00378 Enoyl-CoA hydratase/isomerase GPY28_RS21980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY28_RS21980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY28_RS21985 PF02803 Thiolase, C-terminal domain GPY28_RS21985 PF00108 Thiolase, N-terminal domain GPY28_RS21990 PF04542 Sigma-70 region 2 GPY28_RS21990 PF08281 Sigma-70, region 4 GPY28_RS22000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY28_RS22005 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY28_RS22010 PF04333 MlaA lipoprotein GPY28_RS22015 PF03918 Cytochrome C biogenesis protein GPY28_RS22020 PF03918 Cytochrome C biogenesis protein GPY28_RS22025 PF08534 Redoxin GPY28_RS22030 PF01578 Cytochrome C assembly protein GPY28_RS22030 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GPY28_RS22035 PF03100 CcmE GPY28_RS22040 PF04995 Heme exporter protein D (CcmD) GPY28_RS22045 PF01578 Cytochrome C assembly protein GPY28_RS22050 PF03379 CcmB protein GPY28_RS22055 PF00005 ABC transporter GPY28_RS22065 PF01584 CheW-like domain GPY28_RS22075 PF13614 AAA domain GPY28_RS22080 PF00072 Response regulator receiver domain GPY28_RS22080 PF01339 CheB methylesterase GPY28_RS22085 PF01627 Hpt domain GPY28_RS22085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS22085 PF02895 Signal transducing histidine kinase, homodimeric domain GPY28_RS22085 PF07194 P2 response regulator binding domain GPY28_RS22085 PF01584 CheW-like domain GPY28_RS22090 PF04344 Chemotaxis phosphatase, CheZ GPY28_RS22095 PF00072 Response regulator receiver domain GPY28_RS22100 PF04542 Sigma-70 region 2 GPY28_RS22100 PF04539 Sigma-70 region 3 GPY28_RS22100 PF04545 Sigma-70, region 4 GPY28_RS22105 PF10609 NUBPL iron-transfer P-loop NTPase GPY28_RS22110 PF00448 SRP54-type protein, GTPase domain GPY28_RS22115 PF00771 FHIPEP family GPY28_RS22120 PF01312 FlhB HrpN YscU SpaS Family GPY28_RS22125 PF01311 Bacterial export proteins, family 1 GPY28_RS22130 PF01313 Bacterial export proteins, family 3 GPY28_RS22135 PF00813 FliP family GPY28_RS22140 PF04347 Flagellar biosynthesis protein, FliO GPY28_RS22145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY28_RS22150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY28_RS22150 PF02154 Flagellar motor switch protein FliM GPY28_RS22175 PF18269 T3SS EscN ATPase C-terminal domain GPY28_RS22175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY28_RS22185 PF14841 FliG middle domain GPY28_RS22185 PF14842 FliG N-terminal domain GPY28_RS22185 PF01706 FliG C-terminal domain GPY28_RS22190 PF01514 Secretory protein of YscJ/FliF family GPY28_RS22190 PF08345 Flagellar M-ring protein C-terminal GPY28_RS22195 PF02049 Flagellar hook-basal body complex protein FliE GPY28_RS22200 PF02954 Bacterial regulatory protein, Fis family GPY28_RS22200 PF00072 Response regulator receiver domain GPY28_RS22200 PF00158 Sigma-54 interaction domain GPY28_RS22205 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS22210 PF02954 Bacterial regulatory protein, Fis family GPY28_RS22210 PF00072 Response regulator receiver domain GPY28_RS22210 PF00158 Sigma-54 interaction domain GPY28_RS22215 PF02561 Flagellar protein FliS GPY28_RS22225 PF07195 Flagellar hook-associated protein 2 C-terminus GPY28_RS22225 PF02465 Flagellar hook-associated protein 2 N-terminus GPY28_RS22225 PF07196 Flagellin hook IN motif GPY28_RS22230 PF03646 FlaG protein GPY28_RS22235 PF00700 Bacterial flagellin C-terminal helical region GPY28_RS22235 PF07196 Flagellin hook IN motif GPY28_RS22235 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS22240 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS22240 PF07196 Flagellin hook IN motif GPY28_RS22240 PF00700 Bacterial flagellin C-terminal helical region GPY28_RS22250 PF00669 Bacterial flagellin N-terminal helical region GPY28_RS22250 PF00700 Bacterial flagellin C-terminal helical region GPY28_RS22250 PF07196 Flagellin hook IN motif GPY28_RS22255 PF04261 Dyp-type peroxidase family GPY28_RS22260 PF11143 Protein of unknown function (DUF2919) GPY28_RS22280 PF03960 ArsC family GPY28_RS22285 PF07687 Peptidase dimerisation domain GPY28_RS22285 PF01546 Peptidase family M20/M25/M40 GPY28_RS22305 PF00701 Dihydrodipicolinate synthetase family GPY28_RS22315 PF00578 AhpC/TSA family GPY28_RS22320 PF01594 AI-2E family transporter GPY28_RS22330 PF13181 Tetratricopeptide repeat GPY28_RS22330 PF01435 Peptidase family M48 GPY28_RS22335 PF03960 ArsC family GPY28_RS22340 PF03358 NADPH-dependent FMN reductase GPY28_RS22355 PF00860 Permease family GPY28_RS22365 PF00586 AIR synthase related protein, N-terminal domain GPY28_RS22365 PF02769 AIR synthase related protein, C-terminal domain GPY28_RS22370 PF00551 Formyl transferase GPY28_RS22375 PF13230 Glutamine amidotransferases class-II GPY28_RS22380 PF13580 SIS domain GPY28_RS22385 PF02770 Acyl-CoA dehydrogenase, middle domain GPY28_RS22385 PF09317 Domain of unknown function (DUF1974) GPY28_RS22385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY28_RS22385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY28_RS22390 PF00916 Sulfate permease family GPY28_RS22390 PF01740 STAS domain GPY28_RS22415 PF00929 Exonuclease GPY28_RS22420 PF00075 RNase H GPY28_RS22425 PF08241 Methyltransferase domain GPY28_RS22430 PF16123 Hydroxyacylglutathione hydrolase C-terminus GPY28_RS22430 PF00753 Metallo-beta-lactamase superfamily GPY28_RS22435 PF01476 LysM domain GPY28_RS22435 PF01464 Transglycosylase SLT domain GPY28_RS22445 PF03372 Endonuclease/Exonuclease/phosphatase family GPY28_RS22450 PF00543 Nitrogen regulatory protein P-II GPY28_RS22455 PF00034 Cytochrome c GPY28_RS22460 PF11734 TilS substrate C-terminal domain GPY28_RS22460 PF09179 TilS substrate binding domain GPY28_RS22460 PF01171 PP-loop family GPY28_RS22465 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GPY28_RS22470 PF01336 OB-fold nucleic acid binding domain GPY28_RS22470 PF14579 Helix-hairpin-helix motif GPY28_RS22470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY28_RS22470 PF02811 PHP domain GPY28_RS22470 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY28_RS22475 PF01351 Ribonuclease HII GPY28_RS22480 PF02684 Lipid-A-disaccharide synthetase GPY28_RS22485 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS22485 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GPY28_RS22490 PF07977 FabA-like domain GPY28_RS22495 PF00132 Bacterial transferase hexapeptide (six repeats) GPY28_RS22495 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GPY28_RS22500 PF03938 Outer membrane protein (OmpH-like) GPY28_RS22505 PF07244 Surface antigen variable number repeat GPY28_RS22505 PF01103 Surface antigen GPY28_RS22510 PF02163 Peptidase family M50 GPY28_RS22510 PF17820 PDZ domain GPY28_RS22515 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GPY28_RS22515 PF13288 DXP reductoisomerase C-terminal domain GPY28_RS22515 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GPY28_RS22525 PF01255 Putative undecaprenyl diphosphate synthase GPY28_RS22530 PF01765 Ribosome recycling factor GPY28_RS22535 PF00696 Amino acid kinase family GPY28_RS22540 PF00889 Elongation factor TS GPY28_RS22545 PF00318 Ribosomal protein S2 GPY28_RS22550 PF00557 Metallopeptidase family M24 GPY28_RS22555 PF01966 HD domain GPY28_RS22555 PF08335 GlnD PII-uridylyltransferase GPY28_RS22555 PF01909 Nucleotidyltransferase domain GPY28_RS22555 PF01842 ACT domain GPY28_RS22560 PF11944 Protein of unknown function (DUF3461) GPY28_RS22565 PF00849 RNA pseudouridylate synthase GPY28_RS22570 PF04287 tRNA pseudouridine synthase C GPY28_RS22595 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GPY28_RS22605 PF01370 NAD dependent epimerase/dehydratase family GPY28_RS22630 PF03806 AbgT putative transporter family GPY28_RS22635 PF00444 Ribosomal protein L36 GPY28_RS22640 PF01197 Ribosomal protein L31 GPY28_RS22645 PF01980 tRNA-methyltransferase O GPY28_RS22645 PF18389 TrmO C-terminal domain GPY28_RS22650 PF04073 Aminoacyl-tRNA editing domain GPY28_RS22650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY28_RS22650 PF03129 Anticodon binding domain GPY28_RS22660 PF06786 Uncharacterised protein family (UPF0253) GPY28_RS22670 PF00209 Sodium:neurotransmitter symporter family GPY28_RS22675 PF00704 Glycosyl hydrolases family 18 GPY28_RS22675 PF06483 Chitinase C GPY28_RS22685 PF03449 Transcription elongation factor, N-terminal GPY28_RS22685 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY28_RS22690 PF00570 HRDC domain GPY28_RS22690 PF00271 Helicase conserved C-terminal domain GPY28_RS22690 PF09382 RQC domain GPY28_RS22690 PF16124 RecQ zinc-binding GPY28_RS22690 PF00270 DEAD/DEAH box helicase GPY28_RS22695 PF00817 impB/mucB/samB family GPY28_RS22695 PF11799 impB/mucB/samB family C-terminal domain GPY28_RS22695 PF11798 IMS family HHH motif GPY28_RS22705 PF00072 Response regulator receiver domain GPY28_RS22705 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS22715 PF02424 ApbE family GPY28_RS22720 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY28_RS22720 PF00970 Oxidoreductase FAD-binding domain GPY28_RS22720 PF00175 Oxidoreductase NAD-binding domain GPY28_RS22725 PF02508 Rnf-Nqr subunit, membrane protein GPY28_RS22730 PF02508 Rnf-Nqr subunit, membrane protein GPY28_RS22735 PF04205 FMN-binding domain GPY28_RS22740 PF03116 NQR2, RnfD, RnfE family GPY28_RS22745 PF11973 NQRA C-terminal domain GPY28_RS22745 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GPY28_RS22750 PF01722 BolA-like protein GPY28_RS22755 PF05175 Methyltransferase small domain GPY28_RS22760 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GPY28_RS22760 PF03923 Uncharacterized lipoprotein GPY28_RS22765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY28_RS22770 PF07690 Major Facilitator Superfamily GPY28_RS22780 PF04542 Sigma-70 region 2 GPY28_RS22780 PF04545 Sigma-70, region 4 GPY28_RS22800 PF03502 Nucleoside-specific channel-forming protein, Tsx GPY28_RS22805 PF02558 Ketopantoate reductase PanE/ApbA GPY28_RS22805 PF08546 Ketopantoate reductase PanE/ApbA C terminal GPY28_RS22810 PF01965 DJ-1/PfpI family GPY28_RS22815 PF00266 Aminotransferase class-V GPY28_RS22820 PF17158 Membrane-associated sensor, integral membrane domain GPY28_RS22820 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS22825 PF02657 Fe-S metabolism associated domain GPY28_RS22830 PF00899 ThiF family GPY28_RS22835 PF06725 3D domain GPY28_RS22835 PF03562 MltA specific insert domain GPY28_RS22845 PF00696 Amino acid kinase family GPY28_RS22845 PF00583 Acetyltransferase (GNAT) family GPY28_RS22855 PF13538 UvrD-like helicase C-terminal domain GPY28_RS22860 PF13361 UvrD-like helicase C-terminal domain GPY28_RS22860 PF12705 PD-(D/E)XK nuclease superfamily GPY28_RS22860 PF00580 UvrD/REP helicase N-terminal domain GPY28_RS22865 PF17946 RecC C-terminal domain GPY28_RS22870 PF00884 Sulfatase GPY28_RS22870 PF11893 Domain of unknown function (DUF3413) GPY28_RS22880 PF03466 LysR substrate binding domain GPY28_RS22880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS22885 PF07130 YebG protein GPY28_RS22900 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GPY28_RS22900 PF14602 Hexapeptide repeat of succinyl-transferase GPY28_RS22905 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY28_RS22910 PF07690 Major Facilitator Superfamily GPY28_RS22920 PF00230 Major intrinsic protein GPY28_RS22925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GPY28_RS22925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GPY28_RS22930 PF08220 DeoR-like helix-turn-helix domain GPY28_RS22930 PF00455 DeoR C terminal sensor domain GPY28_RS22935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GPY28_RS22935 PF01266 FAD dependent oxidoreductase GPY28_RS22940 PF01544 CorA-like Mg2+ transporter protein GPY28_RS22960 PF00356 Bacterial regulatory proteins, lacI family GPY28_RS22965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS22965 PF03466 LysR substrate binding domain GPY28_RS22975 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS23005 PF00501 AMP-binding enzyme GPY28_RS23015 PF03466 LysR substrate binding domain GPY28_RS23015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS23020 PF14492 Elongation Factor G, domain II GPY28_RS23020 PF00679 Elongation factor G C-terminus GPY28_RS23020 PF03764 Elongation factor G, domain IV GPY28_RS23020 PF00009 Elongation factor Tu GTP binding domain GPY28_RS23020 PF03144 Elongation factor Tu domain 2 GPY28_RS23025 PF18073 Rubredoxin metal binding domain GPY28_RS23035 PF18429 Domain of unknown function (DUF5609) GPY28_RS23045 PF01048 Phosphorylase superfamily GPY28_RS23050 PF01676 Metalloenzyme superfamily GPY28_RS23055 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GPY28_RS23055 PF00591 Glycosyl transferase family, a/b domain GPY28_RS23055 PF02885 Glycosyl transferase family, helical bundle domain GPY28_RS23060 PF01791 DeoC/LacD family aldolase GPY28_RS23065 PF07670 Nucleoside recognition GPY28_RS23065 PF07662 Na+ dependent nucleoside transporter C-terminus GPY28_RS23065 PF01773 Na+ dependent nucleoside transporter N-terminus GPY28_RS23070 PF01026 TatD related DNase GPY28_RS23080 PF03144 Elongation factor Tu domain 2 GPY28_RS23080 PF16658 Class II release factor RF3, C-terminal domain GPY28_RS23080 PF00009 Elongation factor Tu GTP binding domain GPY28_RS23100 PF13508 Acetyltransferase (GNAT) domain GPY28_RS23110 PF03707 Bacterial signalling protein N terminal repeat GPY28_RS23110 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS23110 PF00563 EAL domain GPY28_RS23125 PF01554 MatE GPY28_RS23135 PF07719 Tetratricopeptide repeat GPY28_RS23135 PF13181 Tetratricopeptide repeat GPY28_RS23140 PF03725 3' exoribonuclease family, domain 2 GPY28_RS23140 PF00013 KH domain GPY28_RS23140 PF01138 3' exoribonuclease family, domain 1 GPY28_RS23140 PF00575 S1 RNA binding domain GPY28_RS23140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GPY28_RS23145 PF00312 Ribosomal protein S15 GPY28_RS23150 PF01509 TruB family pseudouridylate synthase (N terminal domain) GPY28_RS23150 PF16198 tRNA pseudouridylate synthase B C-terminal domain GPY28_RS23150 PF09157 Pseudouridine synthase II TruB, C-terminal GPY28_RS23155 PF02033 Ribosome-binding factor A GPY28_RS23160 PF08364 Bacterial translation initiation factor IF-2 associated region GPY28_RS23160 PF00009 Elongation factor Tu GTP binding domain GPY28_RS23160 PF11987 Translation-initiation factor 2 GPY28_RS23160 PF04760 Translation initiation factor IF-2, N-terminal region GPY28_RS23165 PF00575 S1 RNA binding domain GPY28_RS23165 PF13184 NusA-like KH domain GPY28_RS23165 PF08529 NusA N-terminal domain GPY28_RS23170 PF17384 RimP C-terminal SH3 domain GPY28_RS23170 PF02576 RimP N-terminal domain GPY28_RS23185 PF03840 Preprotein translocase SecG subunit GPY28_RS23195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY28_RS23195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY28_RS23195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY28_RS23195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY28_RS23200 PF00809 Pterin binding enzyme GPY28_RS23205 PF06480 FtsH Extracellular GPY28_RS23205 PF17862 AAA+ lid domain GPY28_RS23205 PF00004 ATPase family associated with various cellular activities (AAA) GPY28_RS23205 PF01434 Peptidase family M41 GPY28_RS23210 PF01728 FtsJ-like methyltransferase GPY28_RS23215 PF01985 CRS1 / YhbY (CRM) domain GPY28_RS23220 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY28_RS23220 PF03449 Transcription elongation factor, N-terminal GPY28_RS23225 PF13609 Gram-negative porin GPY28_RS23230 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GPY28_RS23240 PF00579 tRNA synthetases class I (W and Y) GPY28_RS23245 PF01551 Peptidase family M23 GPY28_RS23245 PF08525 Opacity-associated protein A N-terminal motif GPY28_RS23245 PF01476 LysM domain GPY28_RS23250 PF00873 AcrB/AcrD/AcrF family GPY28_RS23260 PF01521 Iron-sulphur cluster biosynthesis GPY28_RS23265 PF00202 Aminotransferase class-III GPY28_RS23270 PF01594 AI-2E family transporter GPY28_RS23275 PF05175 Methyltransferase small domain GPY28_RS23275 PF08468 Methyltransferase small domain N-terminal GPY28_RS23280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS23280 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS23280 PF00072 Response regulator receiver domain GPY28_RS23280 PF09308 LuxQ, periplasmic GPY28_RS23285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY28_RS23290 PF00528 Binding-protein-dependent transport system inner membrane component GPY28_RS23300 PF00005 ABC transporter GPY28_RS23300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS23305 PF00005 ABC transporter GPY28_RS23305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY28_RS23315 PF01869 BadF/BadG/BcrA/BcrD ATPase family GPY28_RS23320 PF02838 Glycosyl hydrolase family 20, domain 2 GPY28_RS23320 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY28_RS23325 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GPY28_RS23325 PF06165 Glycosyltransferase family 36 GPY28_RS23330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY28_RS23330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY28_RS23330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY28_RS23330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY28_RS23335 PF08402 TOBE domain GPY28_RS23335 PF00005 ABC transporter GPY28_RS23345 PF13416 Bacterial extracellular solute-binding protein GPY28_RS23350 PF00909 Ammonium Transporter Family GPY28_RS23355 PF00543 Nitrogen regulatory protein P-II GPY28_RS23360 PF06062 Uncharacterised protein family (UPF0231) GPY28_RS23365 PF06434 Aconitate hydratase 2 N-terminus GPY28_RS23365 PF00330 Aconitase family (aconitate hydratase) GPY28_RS23365 PF11791 Aconitate B N-terminal domain GPY28_RS23370 PF01734 Patatin-like phospholipase GPY28_RS23375 PF00912 Transglycosylase GPY28_RS23375 PF00905 Penicillin binding protein transpeptidase domain GPY28_RS23375 PF14814 Bifunctional transglycosylase second domain GPY28_RS23380 PF08482 ATP-dependent helicase C-terminal GPY28_RS23380 PF00270 DEAD/DEAH box helicase GPY28_RS23380 PF04408 Helicase associated domain (HA2) GPY28_RS23380 PF00271 Helicase conserved C-terminal domain GPY28_RS23385 PF03749 Sugar fermentation stimulation protein RE domain GPY28_RS23385 PF17746 SfsA N-terminal OB domain GPY28_RS23390 PF01258 Prokaryotic dksA/traR C4-type zinc finger GPY28_RS23395 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY28_RS23400 PF01743 Poly A polymerase head domain GPY28_RS23400 PF12626 Polymerase A arginine-rich C-terminus GPY28_RS23400 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY28_RS23405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY28_RS23410 PF02548 Ketopantoate hydroxymethyltransferase GPY28_RS23415 PF02569 Pantoate-beta-alanine ligase GPY28_RS23420 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY28_RS23425 PF01061 ABC-2 type transporter GPY28_RS23430 PF00005 ABC transporter GPY28_RS23435 PF00916 Sulfate permease family GPY28_RS23435 PF01740 STAS domain GPY28_RS23440 PF00484 Carbonic anhydrase GPY28_RS23445 PF00156 Phosphoribosyl transferase domain GPY28_RS23450 PF00440 Bacterial regulatory proteins, tetR family GPY28_RS23455 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS23455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY28_RS23460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY28_RS23460 PF00364 Biotin-requiring enzyme GPY28_RS23460 PF02817 e3 binding domain GPY28_RS23465 PF17831 Pyruvate dehydrogenase E1 component middle domain GPY28_RS23465 PF00456 Transketolase, thiamine diphosphate binding domain GPY28_RS23470 PF00392 Bacterial regulatory proteins, gntR family GPY28_RS23470 PF07729 FCD domain GPY28_RS23475 PF01510 N-acetylmuramoyl-L-alanine amidase GPY28_RS23480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GPY28_RS23480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GPY28_RS23485 PF00114 Pilin (bacterial filament) GPY28_RS23485 PF07963 Prokaryotic N-terminal methylation motif GPY28_RS23490 PF00437 Type II/IV secretion system protein GPY28_RS23490 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GPY28_RS23495 PF00482 Type II secretion system (T2SS), protein F GPY28_RS23500 PF01478 Type IV leader peptidase family GPY28_RS23500 PF06750 Bacterial Peptidase A24 N-terminal domain GPY28_RS23505 PF01121 Dephospho-CoA kinase GPY28_RS23510 PF07072 Cell division protein GPY28_RS23515 PF03884 DNA gyrase inhibitor YacG GPY28_RS23520 PF01245 Ribosomal protein L19 GPY28_RS23525 PF01746 tRNA (Guanine-1)-methyltransferase GPY28_RS23530 PF05239 PRC-barrel domain GPY28_RS23530 PF01782 RimM N-terminal domain GPY28_RS23535 PF00886 Ribosomal protein S16 GPY28_RS23540 PF02978 Signal peptide binding domain GPY28_RS23540 PF00448 SRP54-type protein, GTPase domain GPY28_RS23540 PF02881 SRP54-type protein, helical bundle domain GPY28_RS23545 PF01578 Cytochrome C assembly protein GPY28_RS23550 PF03471 Transporter associated domain GPY28_RS23550 PF00571 CBS domain GPY28_RS23550 PF01595 Cyclin M transmembrane N-terminal domain GPY28_RS23555 PF02664 S-Ribosylhomocysteinase (LuxS) GPY28_RS23565 PF04262 Glutamate-cysteine ligase GPY28_RS23570 PF00675 Insulinase (Peptidase family M16) GPY28_RS23570 PF05193 Peptidase M16 inactive domain GPY28_RS23575 PF09335 SNARE associated Golgi protein GPY28_RS23585 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GPY28_RS23590 PF00682 HMGL-like GPY28_RS23590 PF02436 Conserved carboxylase domain GPY28_RS23590 PF00364 Biotin-requiring enzyme GPY28_RS23595 PF04277 Oxaloacetate decarboxylase, gamma chain GPY28_RS23650 PF02599 Global regulator protein family GPY28_RS23655 PF01842 ACT domain GPY28_RS23655 PF00696 Amino acid kinase family GPY28_RS23655 PF13840 ACT domain GPY28_RS23660 PF02272 DHHA1 domain GPY28_RS23660 PF01411 tRNA synthetases class II (A) GPY28_RS23660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY28_RS23665 PF02631 RecX family GPY28_RS23675 PF00154 recA bacterial DNA recombination protein GPY28_RS23680 PF02464 Competence-damaged protein GPY28_RS23685 PF00488 MutS domain V GPY28_RS23685 PF05190 MutS family domain IV GPY28_RS23685 PF05192 MutS domain III GPY28_RS23685 PF05188 MutS domain II GPY28_RS23685 PF01624 MutS domain I GPY28_RS23690 PF00140 Sigma-70 factor, region 1.2 GPY28_RS23690 PF04545 Sigma-70, region 4 GPY28_RS23690 PF04542 Sigma-70 region 2 GPY28_RS23690 PF04539 Sigma-70 region 3 GPY28_RS23695 PF01551 Peptidase family M23 GPY28_RS23695 PF01476 LysM domain GPY28_RS23705 PF01975 Survival protein SurE GPY28_RS23710 PF01142 tRNA pseudouridine synthase D (TruD) GPY28_RS23715 PF02542 YgbB family GPY28_RS23720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GPY28_RS23725 PF04977 Septum formation initiator GPY28_RS23730 PF03952 Enolase, N-terminal domain GPY28_RS23730 PF00113 Enolase, C-terminal TIM barrel domain GPY28_RS23735 PF06418 CTP synthase N-terminus GPY28_RS23735 PF00117 Glutamine amidotransferase class-I GPY28_RS23740 PF03819 MazG nucleotide pyrophosphohydrolase domain GPY28_RS23745 PF13291 ACT domain GPY28_RS23745 PF02824 TGS domain GPY28_RS23745 PF04607 Region found in RelA / SpoT proteins GPY28_RS23755 PF01938 TRAM domain GPY28_RS23755 PF05958 tRNA (Uracil-5-)-methyltransferase GPY28_RS23760 PF00512 His Kinase A (phospho-acceptor) domain GPY28_RS23760 PF01627 Hpt domain GPY28_RS23760 PF00072 Response regulator receiver domain GPY28_RS23760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY28_RS23760 PF00672 HAMP domain GPY28_RS23760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY28_RS23765 PF01648 4'-phosphopantetheinyl transferase superfamily GPY28_RS23770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GPY28_RS23775 PF11967 Recombination protein O N terminal GPY28_RS23775 PF02565 Recombination protein O C terminal GPY28_RS23780 PF07650 KH domain GPY28_RS23780 PF01926 50S ribosome-binding GTPase GPY28_RS23785 PF14622 Ribonuclease-III-like GPY28_RS23785 PF00035 Double-stranded RNA binding motif GPY28_RS23790 PF10502 Signal peptidase, peptidase S26 GPY28_RS23795 PF00009 Elongation factor Tu GTP binding domain GPY28_RS23795 PF06421 GTP-binding protein LepA C-terminus GPY28_RS23795 PF00679 Elongation factor G C-terminus GPY28_RS23795 PF03144 Elongation factor Tu domain 2 GPY28_RS23805 PF03888 MucB/RseB N-terminal domain GPY28_RS23805 PF17188 MucB/RseB C-terminal domain GPY28_RS23810 PF03873 Anti sigma-E protein RseA, C-terminal domain GPY28_RS23810 PF03872 Anti sigma-E protein RseA, N-terminal domain GPY28_RS23815 PF04542 Sigma-70 region 2 GPY28_RS23815 PF08281 Sigma-70, region 4 GPY28_RS23825 PF02910 Fumarate reductase flavoprotein C-term GPY28_RS23825 PF00890 FAD binding domain GPY28_RS23835 PF03937 Flavinator of succinate dehydrogenase GPY28_RS23855 PF01494 FAD binding domain GPY28_RS23860 PF01494 FAD binding domain GPY28_RS23865 PF03695 Uncharacterised protein family (UPF0149) GPY28_RS23875 PF05164 Cell division protein ZapA GPY28_RS23885 PF01812 5-formyltetrahydrofolate cyclo-ligase family GPY28_RS23890 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GPY28_RS23895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY28_RS23895 PF01842 ACT domain GPY28_RS23895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY28_RS23900 PF04402 Protein of unknown function (DUF541) GPY28_RS23905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS23905 PF03466 LysR substrate binding domain GPY28_RS23910 PF01810 LysE type translocator GPY28_RS23920 PF05552 Conserved TM helix GPY28_RS23920 PF00924 Mechanosensitive ion channel GPY28_RS23925 PF01116 Fructose-bisphosphate aldolase class-II GPY28_RS23930 PF00162 Phosphoglycerate kinase GPY28_RS23935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY28_RS23935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY28_RS23940 PF00593 TonB dependent receptor GPY28_RS23940 PF07715 TonB-dependent Receptor Plug Domain GPY28_RS23945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS23945 PF03466 LysR substrate binding domain GPY28_RS23950 PF02779 Transketolase, pyrimidine binding domain GPY28_RS23950 PF02780 Transketolase, C-terminal domain GPY28_RS23950 PF00456 Transketolase, thiamine diphosphate binding domain GPY28_RS23960 PF02773 S-adenosylmethionine synthetase, C-terminal domain GPY28_RS23960 PF00438 S-adenosylmethionine synthetase, N-terminal domain GPY28_RS23960 PF02772 S-adenosylmethionine synthetase, central domain GPY28_RS23970 PF17283 SprT-like zinc ribbon domain GPY28_RS23970 PF10263 SprT-like family GPY28_RS23975 PF04231 Endonuclease I GPY28_RS23980 PF04452 RNA methyltransferase GPY28_RS23985 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GPY28_RS23985 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GPY28_RS23990 PF02622 Uncharacterized ACR, COG1678 GPY28_RS23995 PF03652 Holliday junction resolvase GPY28_RS24000 PF00437 Type II/IV secretion system protein GPY28_RS24005 PF00437 Type II/IV secretion system protein GPY28_RS24010 PF01168 Alanine racemase, N-terminal domain GPY28_RS24015 PF03807 NADP oxidoreductase coenzyme F420-dependent GPY28_RS24015 PF14748 Pyrroline-5-carboxylate reductase dimerisation GPY28_RS24020 PF02325 YGGT family GPY28_RS24025 PF02594 Uncharacterised ACR, YggU family COG1872 GPY28_RS24035 PF01725 Ham1 family GPY28_RS24040 PF04055 Radical SAM superfamily GPY28_RS24040 PF06969 HemN C-terminal domain GPY28_RS24045 PF04960 Glutaminase GPY28_RS24050 PF02086 D12 class N6 adenine-specific DNA methyltransferase GPY28_RS24055 PF02390 Putative methyltransferase GPY28_RS24060 PF00633 Helix-hairpin-helix motif GPY28_RS24060 PF14815 NUDIX domain GPY28_RS24060 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY28_RS24065 PF04362 Bacterial Fe(2+) trafficking GPY28_RS24070 PF01464 Transglycosylase SLT domain GPY28_RS24070 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GPY28_RS24110 PF00672 HAMP domain GPY28_RS24110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY28_RS24110 PF17200 Single Cache domain 2 GPY28_RS24140 PF00171 Aldehyde dehydrogenase family GPY28_RS24195 PF04794 YdjC-like protein GPY28_RS24200 PF02056 Family 4 glycosyl hydrolase GPY28_RS24200 PF11975 Family 4 glycosyl hydrolase C-terminal domain GPY28_RS24205 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GPY28_RS24210 PF02378 Phosphotransferase system, EIIC GPY28_RS24215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY28_RS24220 PF01522 Polysaccharide deacetylase GPY28_RS24285 PF10011 Predicted membrane protein (DUF2254) GPY28_RS24295 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY28_RS24300 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY28_RS24305 PF00883 Cytosol aminopeptidase family, catalytic domain GPY28_RS24305 PF02789 Cytosol aminopeptidase family, N-terminal domain GPY28_RS24310 PF04364 DNA polymerase III chi subunit, HolC GPY28_RS24315 PF10458 Valyl tRNA synthetase tRNA binding arm GPY28_RS24315 PF00133 tRNA synthetases class I (I, L, M and V) GPY28_RS24315 PF08264 Anticodon-binding domain of tRNA GPY28_RS24325 PF00583 Acetyltransferase (GNAT) family GPY28_RS24335 PF06877 Regulator of ribonuclease activity B GPY28_RS24345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY28_RS24345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY28_RS24355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY28_RS24355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY28_RS24360 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GPY28_RS24360 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GPY28_RS24365 PF01042 Endoribonuclease L-PSP GPY28_RS24370 PF01553 Acyltransferase GPY28_RS24375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GPY28_RS24380 PF01722 BolA-like protein GPY28_RS24390 PF05494 MlaC protein GPY28_RS24395 PF02470 MlaD protein GPY28_RS24400 PF02405 Permease MlaE GPY28_RS24405 PF00005 ABC transporter GPY28_RS24410 PF01699 Sodium/calcium exchanger protein GPY28_RS24415 PF00571 CBS domain GPY28_RS24415 PF01380 SIS domain GPY28_RS24425 PF03968 OstA-like protein GPY28_RS24430 PF00005 ABC transporter GPY28_RS24430 PF12399 Branched-chain amino acid ATP-binding cassette transporter GPY28_RS24435 PF04963 Sigma-54 factor, core binding domain GPY28_RS24435 PF00309 Sigma-54 factor, Activator interacting domain (AID) GPY28_RS24435 PF04552 Sigma-54, DNA binding domain GPY28_RS24440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY28_RS24445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY28_RS24450 PF03668 P-loop ATPase protein family GPY28_RS24455 PF00381 PTS HPr component phosphorylation site GPY28_RS24460 PF03448 MgtE intracellular N domain GPY28_RS24460 PF01769 Divalent cation transporter GPY28_RS24460 PF00571 CBS domain GPY28_RS24465 PF01523 Putative modulator of DNA gyrase GPY28_RS24470 PF04751 Protein of unknown function (DUF615) GPY28_RS24475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY28_RS24475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY28_RS24480 PF00849 RNA pseudouridylate synthase GPY28_RS24490 PF18339 RapA N-terminal Tudor like domain 1 GPY28_RS24490 PF00176 SNF2 family N-terminal domain GPY28_RS24490 PF12137 RNA polymerase recycling family C-terminal GPY28_RS24490 PF00271 Helicase conserved C-terminal domain GPY28_RS24490 PF18337 RapA N-terminal Tudor like domain GPY28_RS24495 PF13638 PIN domain GPY28_RS24495 PF02562 PhoH-like protein GPY28_RS24500 PF01523 Putative modulator of DNA gyrase GPY28_RS24505 PF00795 Carbon-nitrogen hydrolase GPY28_RS24510 PF13116 Protein of unknown function GPY28_RS24510 PF13502 AsmA-like C-terminal region GPY28_RS24515 PF00575 S1 RNA binding domain GPY28_RS24515 PF10150 Ribonuclease E/G family GPY28_RS24520 PF02545 Maf-like protein GPY28_RS24525 PF04093 rod shape-determining protein MreD GPY28_RS24530 PF04085 rod shape-determining protein MreC GPY28_RS24570 PF00114 Pilin (bacterial filament) GPY28_RS24570 PF07963 Prokaryotic N-terminal methylation motif GPY28_RS24580 PF00482 Type II secretion system (T2SS), protein F GPY28_RS24585 PF00437 Type II/IV secretion system protein GPY28_RS24595 PF13401 AAA domain GPY28_RS24595 PF01471 Putative peptidoglycan binding domain GPY28_RS24600 PF03958 Bacterial type II/III secretion system short domain GPY28_RS24600 PF00263 Bacterial type II and III secretion system protein GPY28_RS24620 PF00563 EAL domain GPY28_RS24620 PF17157 Gammaproteobacterial periplasmic sensor domain GPY28_RS24620 PF00990 Diguanylate cyclase, GGDEF domain GPY28_RS24625 PF00436 Single-strand binding protein family GPY28_RS24630 PF00196 Bacterial regulatory proteins, luxR family GPY28_RS24635 PF00483 Nucleotidyl transferase GPY28_RS24640 PF17755 UvrA DNA-binding domain GPY28_RS24640 PF00005 ABC transporter GPY28_RS24640 PF17760 UvrA interaction domain GPY28_RS24650 PF00266 Aminotransferase class-V GPY28_RS24655 PF01842 ACT domain GPY28_RS24655 PF00696 Amino acid kinase family GPY28_RS24660 PF02965 Vitamin B12 dependent methionine synthase, activation domain GPY28_RS24660 PF02607 B12 binding domain GPY28_RS24660 PF02574 Homocysteine S-methyltransferase GPY28_RS24660 PF00809 Pterin binding enzyme GPY28_RS24660 PF02310 B12 binding domain GPY28_RS24665 PF00999 Sodium/hydrogen exchanger family GPY28_RS24720 PF01507 Phosphoadenosine phosphosulfate reductase family GPY28_RS24725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GPY28_RS24725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GPY28_RS24730 PF00175 Oxidoreductase NAD-binding domain GPY28_RS24730 PF00258 Flavodoxin GPY28_RS24730 PF00667 FAD binding domain GPY28_RS24750 PF01207 Dihydrouridine synthase (Dus) GPY28_RS24755 PF01475 Ferric uptake regulator family GPY28_RS24765 PF00342 Phosphoglucose isomerase GPY28_RS24770 PF01894 Uncharacterised protein family UPF0047 GPY28_RS24775 PF01168 Alanine racemase, N-terminal domain GPY28_RS24775 PF00842 Alanine racemase, C-terminal domain GPY28_RS24780 PF00772 DnaB-like helicase N terminal domain GPY28_RS24780 PF03796 DnaB-like helicase C terminal domain GPY28_RS24790 PF03948 Ribosomal protein L9, C-terminal domain GPY28_RS24790 PF01281 Ribosomal protein L9, N-terminal domain GPY28_RS24795 PF01084 Ribosomal protein S18 GPY28_RS24800 PF00436 Single-strand binding protein family GPY28_RS24805 PF01250 Ribosomal protein S6 GPY28_RS24810 PF00834 Ribulose-phosphate 3 epimerase family GPY28_RS24815 PF02086 D12 class N6 adenine-specific DNA methyltransferase GPY28_RS24825 PF01761 3-dehydroquinate synthase GPY28_RS24830 PF01202 Shikimate kinase GPY28_RS24835 PF00263 Bacterial type II and III secretion system protein GPY28_RS24835 PF07660 Secretin and TonB N terminus short domain GPY28_RS24835 PF03958 Bacterial type II/III secretion system short domain GPY28_RS24835 PF11741 AMIN domain GPY28_RS24860 PF17092 Penicillin-binding protein OB-like domain GPY28_RS24860 PF00912 Transglycosylase GPY28_RS24860 PF00905 Penicillin binding protein transpeptidase domain GPY28_RS24865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY28_RS24865 PF03466 LysR substrate binding domain GPY28_RS24870 PF00462 Glutaredoxin GPY28_RS24870 PF08534 Redoxin GPY28_RS24875 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY28_RS24875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY28_RS24885 PF14698 Argininosuccinate lyase C-terminal GPY28_RS24885 PF00583 Acetyltransferase (GNAT) family GPY28_RS24885 PF00206 Lyase