AL539_RS13235 3fe584f2609a156c43622fa8ce2cc46b 187 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 9.8E-83 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL539_RS13235 3fe584f2609a156c43622fa8ce2cc46b 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 171 7.0E-79 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL539_RS13235 3fe584f2609a156c43622fa8ce2cc46b 187 Gene3D G3DSA:2.60.120.10 1 185 2.3E-79 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS13235 3fe584f2609a156c43622fa8ce2cc46b 187 SUPERFAMILY SSF51182 1 182 4.27E-78 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS13235 3fe584f2609a156c43622fa8ce2cc46b 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 7.0E-74 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.081 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.30.30.30 2 63 2.8E-15 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.40.50.140 132 187 2.5E-20 T 29-03-2018 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50249 132 188 2.06E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 8.1E-19 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 SMART SM01185 69 124 1.6E-13 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 5.5E-89 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50249 67 129 4.71E-12 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.4E-17 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.4E-13 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50104 1 65 9.63E-12 T 29-03-2018 IPR008991 Translation protein SH3-like domain AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 SMART SM00841 132 187 2.2E-25 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.40.50.140 67 130 8.2E-15 T 29-03-2018 AL539_RS05930 049b2149fc50c6b524805dea436e4f69 188 PIRSF PIRSF005901 1 188 1.4E-58 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 Gene3D G3DSA:3.40.190.10 87 175 2.8E-18 T 29-03-2018 AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 SUPERFAMILY SSF53850 89 297 5.32E-40 T 29-03-2018 AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 Gene3D G3DSA:1.10.10.10 1 86 1.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 Gene3D G3DSA:3.40.190.10 176 264 1.6E-24 T 29-03-2018 AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 SUPERFAMILY SSF46785 1 111 2.23E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10315 7bac8bc31d148ffb253f2666f7ba1a99 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23195 12b5018a3e920260d97611f257471b85 410 Gene3D G3DSA:2.40.170.10 27 410 1.2E-122 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL539_RS23195 12b5018a3e920260d97611f257471b85 410 SUPERFAMILY SSF56935 27 410 6.87E-108 T 29-03-2018 AL539_RS23195 12b5018a3e920260d97611f257471b85 410 Pfam PF02264 LamB porin 29 410 1.6E-100 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL539_RS23195 12b5018a3e920260d97611f257471b85 410 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 34 393 2.0E-175 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 Gene3D G3DSA:1.10.10.10 1 52 1.5E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.4E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 SUPERFAMILY SSF46785 1 56 1.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 Gene3D G3DSA:3.30.70.920 56 137 1.5E-15 T 29-03-2018 AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 5.2E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 5.2E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 5.2E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 SMART SM00344 1 110 2.0E-18 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 SUPERFAMILY SSF54909 62 145 5.9E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS20550 78882278f002841f630d0c86d26bcbf5 151 Pfam PF01037 Lrp/AsnC ligand binding domain 77 139 7.3E-12 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS10260 f64621fb204df254bc2a8950bf55f486 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.2E-100 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS10260 f64621fb204df254bc2a8950bf55f486 223 SUPERFAMILY SSF51366 4 218 2.12E-78 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL539_RS10260 f64621fb204df254bc2a8950bf55f486 223 Gene3D G3DSA:3.20.20.70 1 220 9.4E-90 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS10260 f64621fb204df254bc2a8950bf55f486 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS10260 f64621fb204df254bc2a8950bf55f486 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.8E-92 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS10260 f64621fb204df254bc2a8950bf55f486 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS10260 f64621fb204df254bc2a8950bf55f486 223 PIRSF PIRSF001461 1 223 1.5E-106 T 29-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 SMART SM00490 261 342 4.6E-32 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 Gene3D G3DSA:3.40.50.300 12 225 1.4E-62 T 29-03-2018 AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 SMART SM00487 26 225 1.6E-60 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 Gene3D G3DSA:3.40.50.300 226 423 5.9E-45 T 29-03-2018 AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 Pfam PF00270 DEAD/DEAH box helicase 31 198 3.1E-54 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 Pfam PF00271 Helicase conserved C-terminal domain 237 342 1.2E-27 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS18715 6316fca286dc71404903f2d40b9a9d7f 423 SUPERFAMILY SSF52540 78 363 4.05E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 Pfam PF00005 ABC transporter 17 157 7.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 8.3E-138 T 29-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 Gene3D G3DSA:3.40.50.300 16 287 4.4E-50 T 29-03-2018 AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 Pfam PF03459 TOBE domain 292 358 4.4E-13 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 SMART SM00382 24 206 3.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 SUPERFAMILY SSF52540 13 235 1.51E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 Gene3D G3DSA:2.40.50.100 288 356 7.4E-22 T 29-03-2018 AL539_RS18375 6d77ee63d434db899b6e428aeee18176 368 SUPERFAMILY SSF50331 235 358 1.34E-17 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 3.3E-23 T 29-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 1.0E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.1E-13 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.10.760.10 90 237 1.2E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 SUPERFAMILY SSF46626 239 320 1.34E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 321 2.4E-60 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 SUPERFAMILY SSF46626 55 78 1.16E-30 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 SUPERFAMILY SSF46626 145 238 1.16E-30 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 5.1E-6 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 5.1E-6 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.10.760.10 238 324 2.9E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03795 6c6a18c42c5bb04a34c580304d61b37f 324 PIRSF PIRSF000006 1 322 1.8E-111 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL539_RS14030 2a6924048a3a3da2bf0c2d6ef7303d4b 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 3.7E-106 T 29-03-2018 IPR005262 Conserved hypothetical protein CHP00661 AL539_RS14030 2a6924048a3a3da2bf0c2d6ef7303d4b 348 Gene3D G3DSA:3.40.50.2000 2 319 4.0E-11 T 29-03-2018 AL539_RS14030 2a6924048a3a3da2bf0c2d6ef7303d4b 348 Pfam PF13528 Glycosyl transferase family 1 1 300 1.1E-37 T 29-03-2018 AL539_RS14030 2a6924048a3a3da2bf0c2d6ef7303d4b 348 SUPERFAMILY SSF53756 1 300 1.62E-11 T 29-03-2018 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 SUPERFAMILY SSF53067 20 213 8.7E-27 T 29-03-2018 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 232 245 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 Pfam PF00012 Hsp70 protein 22 346 1.1E-15 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 PRINTS PR00301 70kDa heat shock protein signature 238 248 5.1E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 PRINTS PR00301 70kDa heat shock protein signature 20 33 5.1E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 PRINTS PR00301 70kDa heat shock protein signature 171 191 5.1E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 Gene3D G3DSA:3.30.420.40 237 463 2.2E-17 T 29-03-2018 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 Gene3D G3DSA:3.30.420.40 20 236 7.5E-32 T 29-03-2018 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 SUPERFAMILY SSF53067 227 377 3.1E-26 T 29-03-2018 AL539_RS03245 329b81560e40ca52994639afc01228fa 650 SUPERFAMILY SSF53067 432 491 3.1E-26 T 29-03-2018 AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 Gene3D G3DSA:1.20.1610.10 475 672 1.3E-50 T 29-03-2018 AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 Gene3D G3DSA:2.70.98.10 38 345 1.9E-89 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 Pfam PF07971 Glycosyl hydrolase family 92 262 808 9.5E-145 T 29-03-2018 IPR012939 Glycosyl hydrolase family 92 AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 Gene3D G3DSA:1.20.1050.60 369 467 4.3E-23 T 29-03-2018 AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 Gene3D G3DSA:3.30.2080.10 673 818 5.0E-58 T 29-03-2018 AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 34 546 2.1E-110 T 29-03-2018 IPR005887 Alpha-1,2-mannosidase, putative AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 SUPERFAMILY SSF48208 284 543 1.94E-39 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20145 895be18e4f66d2ac9e6cce87706c1dcf 818 SUPERFAMILY SSF48208 581 792 1.94E-39 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 SUPERFAMILY SSF46689 230 279 6.72E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 Gene3D G3DSA:2.60.120.10 26 233 1.3E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 SMART SM00342 194 277 1.2E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 SUPERFAMILY SSF46689 181 227 2.96E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 Gene3D G3DSA:1.10.10.60 234 280 1.2E-11 T 29-03-2018 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 5.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 5.5E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20105 a9e9a49e6780c9e92c4c68ae08ac8906 280 Pfam PF12833 Helix-turn-helix domain 200 278 3.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS07615 24e5a80acddebfd4b522afa22cf0cb5a 136 Gene3D G3DSA:3.40.630.30 5 132 1.6E-11 T 29-03-2018 AL539_RS07615 24e5a80acddebfd4b522afa22cf0cb5a 136 SUPERFAMILY SSF55729 13 122 2.96E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS07615 24e5a80acddebfd4b522afa22cf0cb5a 136 Pfam PF13508 Acetyltransferase (GNAT) domain 46 119 6.9E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 SUPERFAMILY SSF56281 8 283 5.28E-52 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 PRINTS PR00163 Rubredoxin signature 449 465 1.3E-5 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 PRINTS PR00163 Rubredoxin signature 479 495 1.3E-5 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 SUPERFAMILY SSF57802 447 499 7.4E-17 T 29-03-2018 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 Pfam PF00301 Rubredoxin 450 495 4.7E-18 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 SUPERFAMILY SSF52218 251 398 1.19E-35 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 Gene3D G3DSA:3.60.15.10 1 255 4.9E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 Gene3D G3DSA:2.20.28.10 446 499 5.2E-18 T 29-03-2018 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 Gene3D G3DSA:3.40.50.360 256 395 2.6E-21 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 6.2E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 499 75.127 T 29-03-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 Pfam PF00258 Flavodoxin 256 388 4.3E-11 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL539_RS24280 49c251f7a671cc9d7c5088c7c01db70f 500 SMART SM00849 34 209 3.5E-28 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS07560 1d00eacc7a9cf2330032e999bc84dd68 189 Pfam PF03358 NADPH-dependent FMN reductase 13 135 1.0E-11 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL539_RS07560 1d00eacc7a9cf2330032e999bc84dd68 189 Gene3D G3DSA:3.40.50.360 2 188 3.0E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS07560 1d00eacc7a9cf2330032e999bc84dd68 189 SUPERFAMILY SSF52218 4 186 1.01E-55 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS07560 1d00eacc7a9cf2330032e999bc84dd68 189 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 186 3.3E-39 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL539_RS07560 1d00eacc7a9cf2330032e999bc84dd68 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.826 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 1.8E-79 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 SUPERFAMILY SSF55620 10 216 2.08E-74 T 29-03-2018 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 Pfam PF01227 GTP cyclohydrolase I 38 215 9.1E-64 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:3.30.1130.10 87 217 5.7E-47 T 29-03-2018 AL539_RS20220 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:1.10.286.10 7 83 2.6E-25 T 29-03-2018 AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 396 4.4E-163 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 Gene3D G3DSA:3.40.50.1100 16 201 5.5E-36 T 29-03-2018 AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 397 48.227 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 Gene3D G3DSA:3.40.50.1100 202 401 5.1E-35 T 29-03-2018 AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 PIRSF PIRSF001413 1 403 5.4E-172 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 SUPERFAMILY SSF53686 10 395 3.4E-132 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS25455 690c4fbbf728de7ca16adc4f9a880efd 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 384 4.2E-42 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS16620 7b17731b1a322ead51c2e865b9d5288f 116 Gene3D G3DSA:3.30.70.120 1 108 1.5E-18 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_RS16620 7b17731b1a322ead51c2e865b9d5288f 116 SMART SM00938 6 104 7.6E-6 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS16620 7b17731b1a322ead51c2e865b9d5288f 116 SUPERFAMILY SSF54913 1 102 1.11E-21 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_RS21090 265112b6d607d740ebc9300e18a4889b 339 Pfam PF08402 TOBE domain 257 330 7.7E-6 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL539_RS21090 265112b6d607d740ebc9300e18a4889b 339 Pfam PF00005 ABC transporter 20 161 2.5E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS21090 265112b6d607d740ebc9300e18a4889b 339 SUPERFAMILY SSF50331 250 334 4.19E-7 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL539_RS21090 265112b6d607d740ebc9300e18a4889b 339 SUPERFAMILY SSF52540 4 240 5.45E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21090 265112b6d607d740ebc9300e18a4889b 339 SMART SM00382 28 211 1.7E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS21090 265112b6d607d740ebc9300e18a4889b 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS21090 265112b6d607d740ebc9300e18a4889b 339 Gene3D G3DSA:3.40.50.300 1 258 3.5E-79 T 29-03-2018 AL539_RS12650 c57e02d3e74c195c821445f827059504 554 SUPERFAMILY SSF52799 84 227 2.72E-28 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL539_RS12650 c57e02d3e74c195c821445f827059504 554 Gene3D G3DSA:3.40.50.10330 240 369 3.2E-25 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AL539_RS12650 c57e02d3e74c195c821445f827059504 554 SMART SM00404 135 231 4.8E-4 T 29-03-2018 IPR003595 Protein-tyrosine phosphatase, catalytic AL539_RS12650 c57e02d3e74c195c821445f827059504 554 SMART SM00195 90 232 5.1E-14 T 29-03-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 AL539_RS12650 c57e02d3e74c195c821445f827059504 554 SMART SM00046 240 363 3.6E-4 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL539_RS12650 c57e02d3e74c195c821445f827059504 554 SUPERFAMILY SSF111331 242 547 1.13E-52 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AL539_RS12650 c57e02d3e74c195c821445f827059504 554 Pfam PF00782 Dual specificity phosphatase, catalytic domain 99 229 1.6E-17 T 29-03-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AL539_RS12650 c57e02d3e74c195c821445f827059504 554 Pfam PF00781 Diacylglycerol kinase catalytic domain 242 364 6.6E-27 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL539_RS12650 c57e02d3e74c195c821445f827059504 554 Gene3D G3DSA:3.90.190.10 91 239 3.9E-24 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL539_RS03150 fafc25f212e6ff915606ea4f988f4226 397 Gene3D G3DSA:1.20.1090.10 200 397 1.4E-46 T 29-03-2018 AL539_RS03150 fafc25f212e6ff915606ea4f988f4226 397 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 386 4.7E-104 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL539_RS03150 fafc25f212e6ff915606ea4f988f4226 397 SUPERFAMILY SSF56796 26 393 1.27E-106 T 29-03-2018 AL539_RS03150 fafc25f212e6ff915606ea4f988f4226 397 Gene3D G3DSA:3.40.50.1970 26 199 3.0E-44 T 29-03-2018 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Pfam PF17203 Single cache domain 3 38 168 7.3E-19 T 29-03-2018 IPR033463 Single cache domain 3 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 SUPERFAMILY SSF55874 388 534 3.93E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Gene3D G3DSA:3.30.565.10 384 539 6.2E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 536 2.8E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Gene3D G3DSA:1.10.287.130 317 375 6.6E-16 T 29-03-2018 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 SUPERFAMILY SSF103190 40 169 9.81E-34 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 SMART SM00091 213 279 3.6E-5 T 29-03-2018 IPR000014 PAS domain AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 SMART SM00387 418 537 3.3E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Gene3D G3DSA:3.30.450.20 32 164 1.8E-24 T 29-03-2018 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 SUPERFAMILY SSF55785 215 306 1.5E-11 T 29-03-2018 IPR000014 PAS domain AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 SUPERFAMILY SSF55890 322 372 1.7E-9 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Pfam PF00989 PAS fold 214 279 5.2E-7 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 1.9E-9 T 29-03-2018 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 7.3E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 7.3E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 7.3E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS04620 f85d2a4b9a35f0a23f3cb7ade34a38a3 539 Gene3D G3DSA:3.30.450.20 215 316 5.6E-10 T 29-03-2018 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 SUPERFAMILY SSF52540 1 640 5.32E-163 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:3.40.50.300 276 376 3.2E-21 T 29-03-2018 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.855 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:1.10.486.10 377 553 1.7E-41 T 29-03-2018 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:3.40.50.300 1 134 3.1E-24 T 29-03-2018 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:3.40.50.300 135 275 9.6E-29 T 29-03-2018 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.0E-77 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL539_RS12440 36649d67b9e81c7627ead3d0198f3d41 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 6.6E-74 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL539_RS00885 198e0453ffe57271440fd6f4cb84f6a2 208 Pfam PF00239 Resolvase, N terminal domain 4 156 5.2E-27 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS00885 198e0453ffe57271440fd6f4cb84f6a2 208 Pfam PF13384 Homeodomain-like domain 163 198 1.0E-5 T 29-03-2018 AL539_RS00885 198e0453ffe57271440fd6f4cb84f6a2 208 SMART SM00857 3 156 7.6E-35 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS00885 198e0453ffe57271440fd6f4cb84f6a2 208 Gene3D G3DSA:1.10.10.60 161 201 5.4E-7 T 29-03-2018 AL539_RS00885 198e0453ffe57271440fd6f4cb84f6a2 208 SUPERFAMILY SSF53041 1 156 2.75E-27 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS00885 198e0453ffe57271440fd6f4cb84f6a2 208 Gene3D G3DSA:3.40.50.1390 1 160 4.4E-35 T 29-03-2018 AL539_RS00885 198e0453ffe57271440fd6f4cb84f6a2 208 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 Gene3D G3DSA:3.90.180.10 1 155 9.8E-45 T 29-03-2018 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 SMART SM00829 14 340 4.6E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 SUPERFAMILY SSF51735 143 307 4.62E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 SUPERFAMILY SSF50129 3 175 2.89E-53 T 29-03-2018 IPR011032 GroES-like AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 Gene3D G3DSA:3.40.50.10730 156 308 3.3E-27 T 29-03-2018 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 4.3E-181 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.2E-28 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL539_RS23850 edc41900cb4f31024844da137bd210c1 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.93 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 Gene3D G3DSA:1.20.1640.10 809 1014 5.5E-36 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 Gene3D G3DSA:3.30.70.1430 557 718 1.0E-11 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 Gene3D G3DSA:1.20.1640.10 283 504 7.4E-36 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 SUPERFAMILY SSF82714 185 266 3.66E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 Gene3D G3DSA:3.30.2090.10 719 792 6.4E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 SUPERFAMILY SSF82866 292 491 1.83E-37 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 8.7E-179 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 SUPERFAMILY SSF82714 712 788 1.26E-10 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 SUPERFAMILY SSF82693 136 182 2.72E-21 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 SUPERFAMILY SSF82693 270 325 2.72E-21 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 SUPERFAMILY SSF82693 41 135 4.36E-20 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 Gene3D G3DSA:3.30.70.1430 40 144 3.3E-29 T 29-03-2018 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.7E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.7E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.7E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.7E-24 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 Gene3D G3DSA:3.30.2090.10 181 270 1.7E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS18855 d8d9bc4aec9373bc8abd2c8f8e3adef4 1019 SUPERFAMILY SSF82866 795 1015 1.7E-43 T 29-03-2018 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 SMART SM00847 387 477 7.6E-8 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 Pfam PF00271 Helicase conserved C-terminal domain 205 326 1.6E-14 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 SUPERFAMILY SSF52540 12 431 4.57E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 Pfam PF00270 DEAD/DEAH box helicase 12 163 5.7E-9 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 SMART SM00490 226 327 2.4E-18 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 SMART SM00487 2 195 2.3E-12 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 PIRSF PIRSF005496 1 820 0.0 T 29-03-2018 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 Gene3D G3DSA:3.40.50.300 180 345 3.4E-43 T 29-03-2018 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 Gene3D G3DSA:3.40.50.300 3 162 3.0E-22 T 29-03-2018 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 2.3E-9 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 29-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AL539_RS08625 e2d8fbfc2da30036abdf28c14950a79a 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 3.6E-52 T 29-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AL539_RS15525 ea37e7985af860eb7aecf5e68e7d91b6 211 Gene3D G3DSA:3.20.20.450 9 211 4.3E-12 T 29-03-2018 IPR001633 EAL domain AL539_RS15525 ea37e7985af860eb7aecf5e68e7d91b6 211 SUPERFAMILY SSF141868 11 207 5.1E-18 T 29-03-2018 IPR001633 EAL domain AL539_RS15525 ea37e7985af860eb7aecf5e68e7d91b6 211 Pfam PF00563 EAL domain 12 206 1.4E-17 T 29-03-2018 IPR001633 EAL domain AL539_RS15525 ea37e7985af860eb7aecf5e68e7d91b6 211 SMART SM00052 1 211 2.6E-4 T 29-03-2018 IPR001633 EAL domain AL539_RS18860 b0e0337bccdca092d1e993d58c26b8c6 353 SUPERFAMILY SSF111369 48 267 5.23E-24 T 29-03-2018 AL539_RS18860 b0e0337bccdca092d1e993d58c26b8c6 353 Gene3D G3DSA:1.10.287.470 104 148 1.1E-5 T 29-03-2018 AL539_RS18860 b0e0337bccdca092d1e993d58c26b8c6 353 Pfam PF13533 Biotin-lipoyl like 58 104 7.1E-9 T 29-03-2018 AL539_RS18860 b0e0337bccdca092d1e993d58c26b8c6 353 Gene3D G3DSA:2.40.50.100 149 334 4.5E-5 T 29-03-2018 AL539_RS18860 b0e0337bccdca092d1e993d58c26b8c6 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 348 8.2E-55 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS18860 b0e0337bccdca092d1e993d58c26b8c6 353 Gene3D G3DSA:3.90.1170.30 32 103 1.5E-6 T 29-03-2018 AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 SUPERFAMILY SSF52540 335 582 3.75E-91 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 Gene3D G3DSA:3.40.50.300 341 578 1.1E-76 T 29-03-2018 AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 Pfam PF00664 ABC transporter transmembrane region 29 291 9.2E-50 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 1.3E-281 T 29-03-2018 IPR011918 ABC transporter, ATP-binding/permease protein AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 Pfam PF00005 ABC transporter 363 511 2.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 SMART SM00382 371 557 2.4E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 SUPERFAMILY SSF90123 14 324 1.57E-74 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS18965 5e5cdd78eca6e886020f25259d58d875 586 Gene3D G3DSA:1.20.1560.10 6 333 2.8E-66 T 29-03-2018 AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 5.9E-10 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 SUPERFAMILY SSF56042 141 307 9.87E-35 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 3.1E-20 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 Gene3D G3DSA:3.90.650.10 144 320 7.6E-40 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 PIRSF PIRSF005303 1 320 7.9E-81 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 28.876 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 Gene3D G3DSA:3.30.1330.10 1 143 1.6E-32 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 2.2E-103 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL539_RS15910 77ba522d3758f42824380469fb3ea63f 321 SUPERFAMILY SSF55326 3 137 1.3E-32 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.2E-69 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.61 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 29-03-2018 AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.160.20 11 73 2.2E-27 T 29-03-2018 AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 29-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 29-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.230.10 77 167 1.0E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS13610 900b2d690212fb47a4196e3caf46e53c 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 29-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 SUPERFAMILY SSF53623 109 336 1.31E-72 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.755 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 Pfam PF08245 Mur ligase middle domain 115 316 5.3E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 Gene3D G3DSA:3.40.1390.10 9 107 1.3E-18 T 29-03-2018 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 SUPERFAMILY SSF53244 338 489 8.55E-50 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 489 2.4E-168 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 Gene3D G3DSA:3.40.1190.10 108 341 1.2E-50 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 422 1.7E-24 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 SUPERFAMILY SSF63418 18 105 1.27E-20 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 Pfam PF01225 Mur ligase family, catalytic domain 26 102 9.5E-11 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL539_RS14555 6e454d53f392c26702dae456fb1a35c6 493 Gene3D G3DSA:3.90.190.20 342 491 5.0E-48 T 29-03-2018 AL539_RS22165 64759b0169f519782532eb4510620a2c 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 2.7E-65 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22165 64759b0169f519782532eb4510620a2c 204 Gene3D G3DSA:3.20.20.70 1 204 2.7E-49 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS22165 64759b0169f519782532eb4510620a2c 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 5.9E-65 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22165 64759b0169f519782532eb4510620a2c 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.686 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22165 64759b0169f519782532eb4510620a2c 204 SUPERFAMILY SSF51391 3 202 5.75E-67 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS11810 7b1da4669ca0dc7b4ffc5ac92ea3a8c1 471 Pfam PF02581 Thiamine monophosphate synthase 236 429 2.8E-49 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS11810 7b1da4669ca0dc7b4ffc5ac92ea3a8c1 471 Gene3D G3DSA:3.20.20.70 225 447 6.4E-35 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS11810 7b1da4669ca0dc7b4ffc5ac92ea3a8c1 471 SUPERFAMILY SSF51391 226 447 6.02E-57 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 SMART SM00533 283 590 2.3E-109 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Gene3D G3DSA:1.10.1420.10 407 534 7.8E-33 T 29-03-2018 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Pfam PF05192 MutS domain III 269 558 2.4E-41 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 SUPERFAMILY SSF48334 267 564 9.42E-93 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Pfam PF05188 MutS domain II 128 253 6.1E-31 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 SUPERFAMILY SSF52540 566 797 1.69E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 SUPERFAMILY SSF55271 4 113 6.15E-42 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.321 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Pfam PF05190 MutS family domain IV 427 517 1.9E-30 T 29-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Pfam PF01624 MutS domain I 8 119 4.6E-41 T 29-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Gene3D G3DSA:3.30.420.110 132 262 3.4E-28 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 SMART SM00534 606 793 1.2E-118 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Gene3D G3DSA:3.40.1170.10 1 131 1.7E-46 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Pfam PF00488 MutS domain V 609 796 3.2E-87 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 SUPERFAMILY SSF53150 114 266 4.05E-42 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 PIRSF PIRSF037677 1 826 1.5E-159 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Gene3D G3DSA:3.40.50.300 566 812 1.1E-41 T 29-03-2018 AL539_RS08930 5d407b2b980831662ca5f56774c8b3d8 853 Gene3D G3DSA:1.10.1420.10 263 406 3.8E-40 T 29-03-2018 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 SUPERFAMILY SSF50692 554 695 5.2E-23 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Gene3D G3DSA:2.20.25.90 3 57 2.8E-12 T 29-03-2018 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 PIRSF PIRSF036643 2 711 6.1E-127 T 29-03-2018 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 SMART SM00926 3 52 9.8E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Pfam PF00384 Molybdopterin oxidoreductase 55 482 4.3E-79 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Gene3D G3DSA:3.40.50.740 256 542 8.5E-66 T 29-03-2018 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 51 1.8E-10 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Gene3D G3DSA:3.40.50.740 62 224 1.0E-44 T 29-03-2018 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 SUPERFAMILY SSF53706 6 566 2.09E-167 T 29-03-2018 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Pfam PF04324 BFD-like [2Fe-2S] binding domain 817 866 7.0E-12 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Pfam PF01568 Molydopterin dinucleotide binding domain 580 690 7.2E-18 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS26005 4da7bfcc1287e39e71e2a1f9966345b9 887 Gene3D G3DSA:2.40.40.20 543 698 1.1E-23 T 29-03-2018 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 PIRSF PIRSF002191 1 117 1.1E-51 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.6E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.6E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.6E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 SUPERFAMILY SSF50104 2 115 5.31E-48 T 29-03-2018 IPR008991 Translation protein SH3-like domain AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.7E-52 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.52 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08770 060c1a0f5db481e58834e5a41da89739 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 29-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SUPERFAMILY SSF55681 467 695 4.37E-49 T 29-03-2018 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Gene3D G3DSA:3.30.56.10 1 53 2.8E-12 T 29-03-2018 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 47.185 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SUPERFAMILY SSF50249 38 192 2.94E-47 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Gene3D G3DSA:2.40.50.140 54 154 1.7E-41 T 29-03-2018 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.2E-17 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SUPERFAMILY SSF56037 196 394 5.23E-78 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Pfam PF03483 B3/4 domain 212 385 1.9E-71 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Gene3D G3DSA:3.30.56.10 402 475 8.6E-24 T 29-03-2018 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Gene3D G3DSA:3.50.40.10 195 395 3.9E-75 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Gene3D G3DSA:3.30.70.380 704 800 2.1E-24 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SMART SM00896 707 800 9.4E-45 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SMART SM00874 403 471 4.8E-29 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SMART SM00873 212 385 1.4E-100 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Gene3D G3DSA:3.30.930.10 493 696 1.3E-35 T 29-03-2018 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Pfam PF01588 Putative tRNA binding domain 45 145 4.8E-26 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SUPERFAMILY SSF54991 703 800 6.02E-30 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 1.4E-276 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL539_RS02325 71082dcf66104a321ffa3bc4942ee767 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 1.5E-28 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL539_RS18195 f989faa48b37488ebfee1d77cf2bed03 386 SUPERFAMILY SSF103473 18 379 7.85E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS18195 f989faa48b37488ebfee1d77cf2bed03 386 Gene3D G3DSA:1.20.1250.20 8 195 4.1E-16 T 29-03-2018 AL539_RS18195 f989faa48b37488ebfee1d77cf2bed03 386 Gene3D G3DSA:1.20.1250.20 196 381 3.5E-12 T 29-03-2018 AL539_RS18195 f989faa48b37488ebfee1d77cf2bed03 386 Pfam PF07690 Major Facilitator Superfamily 19 343 7.7E-23 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS16005 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 SUPERFAMILY SSF53850 32 269 1.6E-78 T 29-03-2018 AL539_RS16005 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 5.8E-126 T 29-03-2018 IPR004872 Lipoprotein NlpA family AL539_RS16005 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 Gene3D G3DSA:3.40.190.10 32 126 2.5E-21 T 29-03-2018 AL539_RS16005 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 PIRSF PIRSF002854 1 269 7.5E-99 T 29-03-2018 IPR004872 Lipoprotein NlpA family AL539_RS16005 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 Pfam PF03180 NLPA lipoprotein 33 269 3.9E-98 T 29-03-2018 IPR004872 Lipoprotein NlpA family AL539_RS16005 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 Gene3D G3DSA:3.40.190.10 127 269 4.2E-48 T 29-03-2018 AL539_RS15435 9783fb76f2149094d56ad60f2e032cab 422 Gene3D G3DSA:3.40.640.10 1 287 6.4E-61 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS15435 9783fb76f2149094d56ad60f2e032cab 422 Gene3D G3DSA:3.90.1150.10 289 422 2.7E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS15435 9783fb76f2149094d56ad60f2e032cab 422 PIRSF PIRSF001434 1 422 3.4E-127 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS15435 9783fb76f2149094d56ad60f2e032cab 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.0E-198 T 29-03-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 AL539_RS15435 9783fb76f2149094d56ad60f2e032cab 422 SUPERFAMILY SSF53383 1 421 1.46E-125 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS15435 9783fb76f2149094d56ad60f2e032cab 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS15435 9783fb76f2149094d56ad60f2e032cab 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 5.8E-142 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS17660 509a6da73ee8dca9511575238ccd4af7 267 SUPERFAMILY SSF53474 15 260 2.01E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS17660 509a6da73ee8dca9511575238ccd4af7 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 1.1E-21 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS17660 509a6da73ee8dca9511575238ccd4af7 267 Gene3D G3DSA:3.40.50.1820 8 265 3.6E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS17660 509a6da73ee8dca9511575238ccd4af7 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.6E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS17660 509a6da73ee8dca9511575238ccd4af7 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.6E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS17660 509a6da73ee8dca9511575238ccd4af7 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.6E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 5.0E-103 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 29-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 SUPERFAMILY SSF53790 12 232 6.28E-86 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 Gene3D G3DSA:3.40.1010.10 11 121 2.2E-43 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 Gene3D G3DSA:3.30.950.10 122 237 5.6E-43 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 PIRSF PIRSF005917 1 286 4.1E-109 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.654 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14525 854e6e50a9c142df814999868c31ec0c 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 9.0E-30 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Gene3D G3DSA:2.60.40.1310 103 220 0.045 T 29-03-2018 AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Gene3D G3DSA:2.60.40.1310 221 395 0.1 T 29-03-2018 AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Gene3D G3DSA:2.60.40.10 1597 1668 9.7E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Pfam PF13752 Domain of unknown function (DUF4165) 23 143 6.0E-16 T 29-03-2018 IPR025429 Domain of unknown function DUF4165 AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Gene3D G3DSA:2.60.120.40 1048 1214 0.0033 T 29-03-2018 IPR008983 Tumour necrosis factor-like domain GO:0005515 AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Gene3D G3DSA:2.60.40.10 491 595 0.089 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Gene3D G3DSA:2.60.40.10 602 704 6.3E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS00050 2a6f4e939efbf00ad8a5b329c35a80c7 1838 Pfam PF13750 Bacterial Ig-like domain (group 3) 558 709 2.1E-44 T 29-03-2018 IPR022038 Bacterial Ig-like domain AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 Gene3D G3DSA:3.30.70.1170 170 227 2.1E-17 T 29-03-2018 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 SUPERFAMILY SSF48013 1 146 1.96E-36 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 Gene3D G3DSA:1.10.940.10 1 142 8.0E-31 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 SUPERFAMILY SSF53335 139 424 1.25E-78 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 5.4E-69 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 Gene3D G3DSA:1.10.287.730 143 168 1.1E-12 T 29-03-2018 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 Gene3D G3DSA:3.40.50.150 228 427 7.5E-58 T 29-03-2018 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 Pfam PF01029 NusB family 1 123 2.1E-24 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.1E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.1E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.1E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.1E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.1E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS12020 f2f34390f48078b2cf0777f8e6642193 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 1.6E-153 T 29-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.50.100 1153 1212 1.8E-16 T 29-03-2018 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.985 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.0E-19 T 29-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 SUPERFAMILY SSF64484 1133 1363 0.0 T 29-03-2018 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 SUPERFAMILY SSF64484 16 944 0.0 T 29-03-2018 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.40.20 346 488 5.5E-40 T 29-03-2018 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.7E-87 T 29-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.0E-76 T 29-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 SMART SM00663 235 514 1.1E-184 T 29-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.2E-27 T 29-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.50.100 907 1010 1.5E-28 T 29-03-2018 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.50.100 1042 1123 3.7E-12 T 29-03-2018 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.50.100 1011 1041 0.25 T 29-03-2018 AL539_RS11185 e3df13fedd68104b820be13795d1b652 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 856 870 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 204 224 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 174 188 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 506 520 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 568 583 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 301 320 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 373 391 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00943 Copper-transporting ATPase signature 760 777 8.3E-14 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 581 794 1.4E-47 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Gene3D G3DSA:3.40.1110.10 603 711 5.6E-28 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 783 802 5.1E-27 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 806 818 5.1E-27 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 719 5.1E-27 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 5.1E-27 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 599 5.1E-27 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 740 5.1E-27 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Gene3D G3DSA:3.30.70.100 64 128 7.1E-7 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 316 892 1.5E-182 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Pfam PF00122 E1-E2 ATPase 384 564 1.1E-48 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 297 893 5.8E-183 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Gene3D G3DSA:3.40.50.1000 712 849 5.9E-44 T 29-03-2018 IPR023214 HAD-like domain AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF56784 583 603 3.98E-59 T 29-03-2018 IPR023214 HAD-like domain AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF56784 641 889 3.98E-59 T 29-03-2018 IPR023214 HAD-like domain AL539_RS16375 15041e957a749638d8b9064be7624350 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 587 593 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Gene3D G3DSA:3.30.70.100 1 63 1.5E-7 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF81653 386 483 5.36E-25 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF55008 1 62 2.75E-8 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Gene3D G3DSA:1.20.1110.10 348 602 8.6E-44 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 355 861 6.0E-92 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 ProSitePatterns PS01047 Heavy-metal-associated domain. 164 193 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Gene3D G3DSA:3.30.70.100 157 246 3.5E-19 T 29-03-2018 AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF55008 65 126 1.83E-6 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF55008 159 228 3.93E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF81665 484 579 1.03E-9 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF81665 832 849 1.03E-9 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 SUPERFAMILY SSF81665 350 387 1.03E-9 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Pfam PF00403 Heavy-metal-associated domain 164 223 2.4E-14 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS16375 15041e957a749638d8b9064be7624350 898 Pfam PF00403 Heavy-metal-associated domain 6 61 1.8E-6 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 SUPERFAMILY SSF161093 276 446 1.44E-47 T 29-03-2018 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 Pfam PF01769 Divalent cation transporter 319 440 5.2E-24 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 SUPERFAMILY SSF54631 139 272 6.47E-14 T 29-03-2018 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 Gene3D G3DSA:1.25.60.10 2 125 4.4E-4 T 29-03-2018 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 Gene3D G3DSA:1.10.357.20 275 448 5.2E-33 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 Pfam PF03448 MgtE intracellular N domain 35 135 1.4E-14 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_RS20620 456d80a17b445e142709764b890d7a99 448 Gene3D G3DSA:3.10.580.10 126 247 6.2E-10 T 29-03-2018 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 SUPERFAMILY SSF158791 32 133 2.22E-14 T 29-03-2018 AL539_RS20620 456d80a17b445e142709764b890d7a99 448 SMART SM00924 34 137 4.8E-13 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.73 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 29-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 Pfam PF00231 ATP synthase 5 287 1.8E-98 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 SUPERFAMILY SSF52943 2 288 9.81E-96 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 Gene3D G3DSA:3.40.1380.10 42 240 4.0E-75 T 29-03-2018 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.5E-111 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 Gene3D G3DSA:1.10.287.80 2 41 1.4E-18 T 29-03-2018 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 Gene3D G3DSA:1.10.287.80 241 283 3.7E-14 T 29-03-2018 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.2E-36 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.2E-36 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.2E-36 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12150 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.2E-36 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Gene3D G3DSA:2.160.10.10 308 437 3.4E-36 T 29-03-2018 AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 2.5E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 9.0E-4 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 7.6E-205 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 3.8E-22 T 29-03-2018 IPR025877 MobA-like NTP transferase AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 SUPERFAMILY SSF51161 252 434 8.38E-51 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Gene3D G3DSA:2.160.10.10 242 307 1.2E-15 T 29-03-2018 AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Gene3D G3DSA:3.90.550.10 1 241 1.1E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 SUPERFAMILY SSF53448 1 249 4.73E-64 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS12135 fb66e17ad66e14671afa2119cec96c46 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.566 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 SUPERFAMILY SSF46689 59 107 4.93E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 Gene3D G3DSA:3.20.80.10 151 299 3.4E-23 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 Pfam PF06445 GyrI-like small molecule binding domain 155 298 1.5E-24 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 7.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 7.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 Pfam PF12833 Helix-turn-helix domain 30 106 2.4E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 SUPERFAMILY SSF46689 6 57 7.53E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 SMART SM00871 150 299 1.1E-23 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 SMART SM00342 23 106 1.1E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 SUPERFAMILY SSF55136 155 299 7.85E-30 T 29-03-2018 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 Gene3D G3DSA:1.10.10.60 5 63 3.2E-14 T 29-03-2018 AL539_RS22955 f868f0eafd220b9df92dcc8f153cecab 299 Gene3D G3DSA:1.10.10.60 64 124 8.8E-11 T 29-03-2018 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF140356 4 104 9.29E-33 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:3.30.870.10 500 686 2.2E-33 T 29-03-2018 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 681 27.252 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 4.7E-48 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:1.20.58.310 9 108 1.1E-34 T 29-03-2018 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF56024 315 496 6.59E-54 T 29-03-2018 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF143724 107 313 1.96E-65 T 29-03-2018 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:3.30.1840.10 109 307 3.1E-58 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 3.9E-264 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 7.3E-32 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 PIRSF PIRSF015589 1 694 1.0E-253 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.0E-144 T 29-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:3.30.870.10 320 499 4.2E-21 T 29-03-2018 AL539_RS15185 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF56024 500 684 4.49E-69 T 29-03-2018 AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 Pfam PF00483 Nucleotidyl transferase 6 272 1.1E-68 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.4E-153 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 SUPERFAMILY SSF53448 342 357 1.45E-77 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 SUPERFAMILY SSF53448 5 275 1.45E-77 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 SUPERFAMILY SSF51161 312 395 9.27E-17 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 Gene3D G3DSA:3.90.550.10 5 299 1.2E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 Gene3D G3DSA:2.160.10.10 300 397 1.1E-7 T 29-03-2018 AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 49.447 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS18765 a791b100e6df91d3400c82c59387cc7d 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS02475 715b2814a0981884166ce33c35052171 224 SMART SM00895 82 207 1.7E-19 T 29-03-2018 IPR011711 GntR, C-terminal AL539_RS02475 715b2814a0981884166ce33c35052171 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS02475 715b2814a0981884166ce33c35052171 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS02475 715b2814a0981884166ce33c35052171 224 SUPERFAMILY SSF46785 9 76 1.77E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02475 715b2814a0981884166ce33c35052171 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.5E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS02475 715b2814a0981884166ce33c35052171 224 SUPERFAMILY SSF48008 78 214 7.85E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS02475 715b2814a0981884166ce33c35052171 224 Pfam PF07729 FCD domain 82 206 1.2E-24 T 29-03-2018 IPR011711 GntR, C-terminal AL539_RS02475 715b2814a0981884166ce33c35052171 224 Gene3D G3DSA:1.10.10.10 2 75 2.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02475 715b2814a0981884166ce33c35052171 224 Gene3D G3DSA:1.20.120.530 76 224 3.3E-30 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS02475 715b2814a0981884166ce33c35052171 224 SMART SM00345 14 72 1.5E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 SUPERFAMILY SSF53383 506 957 1.13E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 Gene3D G3DSA:1.20.1650.10 477 559 2.9E-33 T 29-03-2018 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 Pfam PF00202 Aminotransferase class-III 51 464 2.5E-94 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 Gene3D G3DSA:3.40.640.10 78 341 2.3E-67 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 Gene3D G3DSA:3.90.1150.10 846 958 1.3E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 529 892 7.1E-61 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 SUPERFAMILY SSF53383 42 464 8.5E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 Gene3D G3DSA:3.40.640.10 570 845 2.8E-51 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 1.5E-160 T 29-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AL539_RS05880 daf4c52b717154afdd4ffd981c91ddc7 958 Gene3D G3DSA:3.90.1150.10 342 469 3.2E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 Pfam PF00106 short chain dehydrogenase 3 183 1.7E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 Gene3D G3DSA:3.40.50.720 145 212 1.1E-12 T 29-03-2018 AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 SUPERFAMILY SSF51735 3 236 1.34E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.5E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.5E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 2.5E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS01550 6ebcf8681bf66039701bca22989e4a3d 241 Gene3D G3DSA:3.40.50.720 1 144 8.8E-31 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82693 565 670 1.36E-30 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82866 831 1025 1.57E-40 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82693 672 721 3.14E-26 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82693 808 856 3.14E-26 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82714 182 272 4.05E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82693 38 131 1.26E-24 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 Gene3D G3DSA:1.20.1640.10 277 499 6.3E-45 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 Gene3D G3DSA:1.20.1640.10 822 1029 2.1E-33 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82866 296 497 1.26E-48 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82693 136 182 5.75E-24 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82693 274 330 5.75E-24 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 SUPERFAMILY SSF82714 722 809 7.46E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 Gene3D G3DSA:3.30.70.1430 567 668 2.4E-19 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 Gene3D G3DSA:3.30.2090.10 180 275 1.6E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 Gene3D G3DSA:3.30.70.1430 38 140 8.3E-27 T 29-03-2018 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.8E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01270 b24b1df79129a2f9ddc9eed04c4b38cf 1053 Gene3D G3DSA:3.30.70.1440 672 768 2.9E-17 T 29-03-2018 AL539_RS15415 59fc945195c7d4bed1eebaf486ac8928 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 2.0E-35 T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL539_RS15415 59fc945195c7d4bed1eebaf486ac8928 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 Gene3D G3DSA:1.10.10.10 1 52 1.1E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 SUPERFAMILY SSF46785 1 60 4.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 3.7E-21 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.4E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.4E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.4E-16 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 SUPERFAMILY SSF54909 63 149 5.5E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 Gene3D G3DSA:3.30.70.920 53 150 1.1E-23 T 29-03-2018 AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 SMART SM00344 1 110 9.1E-45 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_RS20450 c23be1d7142f3f99f7929131f6bb05a3 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 2.4E-18 T 29-03-2018 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 SMART SM00065 17 163 1.7E-20 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 SUPERFAMILY SSF51621 423 714 3.14E-97 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 5.9E-22 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Pfam PF01590 GAF domain 17 152 4.6E-14 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 7.9E-96 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 1.6E-136 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.0E-14 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Gene3D G3DSA:3.50.30.10 311 407 2.9E-18 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 SUPERFAMILY SSF55781 2 158 3.27E-31 T 29-03-2018 IPR029016 GAF domain-like AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 SUPERFAMILY SSF52009 293 412 1.96E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 SUPERFAMILY SSF47831 204 311 6.15E-27 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Gene3D G3DSA:3.20.20.60 417 738 1.4E-88 T 29-03-2018 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Gene3D G3DSA:3.30.450.40 1 161 9.4E-28 T 29-03-2018 IPR029016 GAF domain-like AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 Gene3D G3DSA:1.10.274.10 199 310 1.1E-26 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 29-03-2018 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 29-03-2018 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 29-03-2018 AL539_RS14890 62b623fba83855f7ead5a8252a871244 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 29-03-2018 AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 SUPERFAMILY SSF88697 25 94 2.2E-17 T 29-03-2018 IPR015947 PUA-like domain AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 Gene3D G3DSA:2.30.130.10 25 93 2.6E-24 T 29-03-2018 IPR002478 PUA domain GO:0003723 AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 Gene3D G3DSA:3.40.50.150 187 414 5.1E-33 T 29-03-2018 AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 188 397 2.7E-29 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 22 418 68.244 T 29-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 Gene3D G3DSA:3.30.750.80 94 186 1.7E-34 T 29-03-2018 AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 SUPERFAMILY SSF53335 99 414 3.84E-69 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS04040 bcad22e33760f3131a968b2f007409b9 418 SMART SM00359 24 108 3.0E-15 T 29-03-2018 IPR002478 PUA domain GO:0003723 AL539_RS17185 a5a85c277bc0d5c45692bcf645064e50 435 Gene3D G3DSA:3.60.120.10 1 427 2.4E-95 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AL539_RS17185 a5a85c277bc0d5c45692bcf645064e50 435 Pfam PF00425 chorismate binding enzyme 164 417 2.8E-71 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL539_RS17185 a5a85c277bc0d5c45692bcf645064e50 435 SUPERFAMILY SSF56322 29 425 9.29E-101 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AL539_RS17185 a5a85c277bc0d5c45692bcf645064e50 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 9.0E-103 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL539_RS17185 a5a85c277bc0d5c45692bcf645064e50 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.0 T 29-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL539_RS21085 1f10337d8b0e9132b4d8fa5d8aee1897 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 261 1.6E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21085 1f10337d8b0e9132b4d8fa5d8aee1897 262 Gene3D G3DSA:1.10.3720.10 10 262 6.0E-38 T 29-03-2018 AL539_RS21085 1f10337d8b0e9132b4d8fa5d8aee1897 262 SUPERFAMILY SSF161098 12 258 4.49E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.3E-87 T 29-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 195 2.7E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 Gene3D G3DSA:1.10.150.240 15 85 5.3E-21 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 6.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 6.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 6.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 Gene3D G3DSA:3.40.50.1000 86 224 2.4E-34 T 29-03-2018 IPR023214 HAD-like domain AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 SUPERFAMILY SSF56784 2 222 2.03E-49 T 29-03-2018 IPR023214 HAD-like domain AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 189 1.6E-15 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21685 fd39545ee3570a74310f4c4dc7e32640 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 1.2E-23 T 29-03-2018 IPR023214 HAD-like domain AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 SUPERFAMILY SSF141072 152 259 2.75E-17 T 29-03-2018 AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 Pfam PF03160 Calx-beta domain 57 127 1.9E-7 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 Pfam PF03160 Calx-beta domain 141 239 1.8E-11 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 SMART SM00237 141 240 9.4E-5 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 SMART SM00237 36 128 0.0046 T 29-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 Pfam PF07603 Protein of unknown function (DUF1566) 330 540 4.9E-19 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 SUPERFAMILY SSF141072 40 151 1.96E-21 T 29-03-2018 AL539_RS00635 bf267e0de37cb6527bd0fe62c252512c 545 Gene3D G3DSA:2.60.40.1740 114 260 6.1E-4 T 29-03-2018 AL539_RS15260 4ecba34503583272c2fb7b576e2a1f89 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 4.0E-30 T 29-03-2018 IPR003849 Preprotein translocase YajC AL539_RS15260 4ecba34503583272c2fb7b576e2a1f89 109 Pfam PF02699 Preprotein translocase subunit 21 98 3.9E-26 T 29-03-2018 IPR003849 Preprotein translocase YajC AL539_RS15260 4ecba34503583272c2fb7b576e2a1f89 109 SMART SM01323 17 101 1.9E-38 T 29-03-2018 IPR003849 Preprotein translocase YajC AL539_RS15260 4ecba34503583272c2fb7b576e2a1f89 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 29-03-2018 IPR003849 Preprotein translocase YajC AL539_RS15260 4ecba34503583272c2fb7b576e2a1f89 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 29-03-2018 IPR003849 Preprotein translocase YajC AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 4.8E-20 T 29-03-2018 IPR022216 ABC cobalt transporter GO:0016820 AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 SUPERFAMILY SSF52540 297 527 1.85E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 Pfam PF00005 ABC transporter 315 461 5.8E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 Pfam PF00005 ABC transporter 20 170 1.1E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 SUPERFAMILY SSF52540 2 235 9.45E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 SMART SM00382 29 221 2.4E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 SMART SM00382 324 510 2.6E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 Gene3D G3DSA:3.40.50.300 295 576 1.7E-60 T 29-03-2018 AL539_RS23985 e449ce1622cd61b1afb1e861e3958e79 579 Gene3D G3DSA:3.40.50.300 1 241 5.4E-61 T 29-03-2018 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 Pfam PF00512 His Kinase A (phospho-acceptor) domain 379 443 1.1E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 Pfam PF00072 Response regulator receiver domain 757 870 2.2E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 Gene3D G3DSA:3.40.50.2300 742 876 6.0E-38 T 29-03-2018 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 SMART SM00448 755 872 3.8E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 546 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 560 1.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 SUPERFAMILY SSF52172 753 873 5.41E-35 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 Gene3D G3DSA:1.10.287.130 382 439 2.6E-19 T 29-03-2018 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 Gene3D G3DSA:3.30.565.10 447 609 2.1E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 Gene3D G3DSA:3.30.450.20 251 381 0.005 T 29-03-2018 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 SMART SM00387 490 607 1.9E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 SUPERFAMILY SSF47384 363 444 5.3E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 SUPERFAMILY SSF55874 432 603 5.37E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 605 1.7E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20520 6d4ec31c61d744cc7ffb059650190115 878 SMART SM00388 378 443 1.5E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 1.2E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 Gene3D G3DSA:1.10.10.10 3 106 4.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 SMART SM00418 5 83 1.2E-24 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 29-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 SUPERFAMILY SSF46785 5 85 2.46E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.1E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.1E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.1E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS11520 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.1E-19 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS03540 e3c2dd92f259619dcb70c35ae960fb56 274 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 11 267 25.814 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL539_RS03540 e3c2dd92f259619dcb70c35ae960fb56 274 Pfam PF02634 FdhD/NarQ family 35 266 1.8E-73 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL539_RS03540 e3c2dd92f259619dcb70c35ae960fb56 274 Gene3D G3DSA:3.10.20.10 36 92 2.0E-10 T 29-03-2018 AL539_RS03540 e3c2dd92f259619dcb70c35ae960fb56 274 Gene3D G3DSA:3.40.140.10 132 271 1.2E-48 T 29-03-2018 AL539_RS03540 e3c2dd92f259619dcb70c35ae960fb56 274 PIRSF PIRSF015626 2 271 1.7E-97 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL539_RS03540 e3c2dd92f259619dcb70c35ae960fb56 274 SUPERFAMILY SSF53927 15 266 4.81E-70 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 Gene3D G3DSA:2.60.40.1180 556 649 9.2E-12 T 29-03-2018 AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 Gene3D G3DSA:2.60.40.10 3 125 8.4E-18 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 Pfam PF00128 Alpha amylase, catalytic domain 199 250 3.1E-5 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 SUPERFAMILY SSF81296 7 123 1.85E-21 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 1.5E-9 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 Gene3D G3DSA:3.20.20.80 126 553 6.5E-76 T 29-03-2018 AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 SMART SM00642 151 539 3.8E-4 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 SUPERFAMILY SSF51445 471 542 4.3E-98 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 SUPERFAMILY SSF51445 112 442 4.3E-98 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 647 4.8E-203 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AL539_RS23190 60c6ffc69d77194e8848bd0a4f536e1d 663 SUPERFAMILY SSF51011 556 648 1.97E-13 T 29-03-2018 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 Gene3D G3DSA:3.40.47.10 5 260 2.4E-52 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 8.2E-84 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 SUPERFAMILY SSF53901 266 390 4.12E-44 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.9E-49 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 SUPERFAMILY SSF53901 4 263 2.6E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 1.6E-142 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 PIRSF PIRSF000429 2 391 1.6E-133 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.412 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 2.4E-241 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL539_RS12350 d96c6e711c185d5372e71b28c4946887 391 Gene3D G3DSA:3.40.47.10 261 388 2.0E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07645 535ebf95f914d0d56b51cb9a10aaab10 248 Pfam PF08241 Methyltransferase domain 61 125 2.1E-9 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL539_RS07645 535ebf95f914d0d56b51cb9a10aaab10 248 SUPERFAMILY SSF53335 73 212 3.07E-20 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS07645 535ebf95f914d0d56b51cb9a10aaab10 248 Gene3D G3DSA:3.40.50.150 56 216 4.3E-19 T 29-03-2018 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 Gene3D G3DSA:1.25.40.80 131 291 4.5E-36 T 29-03-2018 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 SUPERFAMILY SSF48173 191 470 2.75E-106 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 Gene3D G3DSA:1.10.579.10 294 471 7.0E-74 T 29-03-2018 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 Pfam PF00875 DNA photolyase 3 162 1.6E-45 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 1.4E-81 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 PRINTS PR00147 DNA photolyase signature 325 341 7.7E-30 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 PRINTS PR00147 DNA photolyase signature 384 398 7.7E-30 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 PRINTS PR00147 DNA photolyase signature 345 363 7.7E-30 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 PRINTS PR00147 DNA photolyase signature 142 158 7.7E-30 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 SUPERFAMILY SSF52425 1 186 7.85E-51 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 Gene3D G3DSA:3.40.50.620 1 130 2.6E-32 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS24035 220c207d8628137b868f21249fc4a05c 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 PIRSF PIRSF000447 1 416 4.3E-203 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 Gene3D G3DSA:3.40.47.10 261 414 1.1E-49 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 1.6E-191 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 SMART SM00825 Beta-ketoacyl synthase 6 416 5.3E-16 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 Gene3D G3DSA:3.40.47.10 6 260 7.0E-83 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 SUPERFAMILY SSF53901 215 414 3.69E-67 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.2E-64 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 SUPERFAMILY SSF53901 3 252 3.02E-80 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS06415 e59aca753e7ee0c2e53f50f89ea7e04c 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 4.3E-36 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 Gene3D G3DSA:2.30.38.10 413 503 4.6E-11 T 29-03-2018 AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 13 65 2.0E-12 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 Gene3D G3DSA:3.40.50.980 60 248 1.0E-42 T 29-03-2018 AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 Gene3D G3DSA:3.40.50.980 249 412 4.2E-38 T 29-03-2018 AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 Gene3D G3DSA:3.30.300.30 504 614 1.3E-24 T 29-03-2018 AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 Pfam PF13193 AMP-binding enzyme C-terminal domain 519 598 2.3E-25 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 SUPERFAMILY SSF56801 8 626 7.72E-154 T 29-03-2018 AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 Pfam PF00501 AMP-binding enzyme 74 510 2.5E-82 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS04280 110bf7660a68b1778d62170c76cc1279 634 ProSitePatterns PS00455 Putative AMP-binding domain signature. 246 257 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 SUPERFAMILY SSF50249 2 63 3.14E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 Gene3D G3DSA:2.40.50.140 2 66 9.1E-25 T 29-03-2018 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 31.54 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 Gene3D G3DSA:1.10.150.20 67 140 3.7E-12 T 29-03-2018 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 SMART SM00278 108 127 0.071 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 SMART SM00278 73 92 540.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 SUPERFAMILY SSF46929 157 202 8.11E-13 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 Pfam PF01330 RuvA N terminal domain 2 62 2.0E-21 T 29-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 SUPERFAMILY SSF47781 66 136 2.45E-19 T 29-03-2018 IPR010994 RuvA domain 2-like AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.6E-13 T 29-03-2018 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 Gene3D G3DSA:1.10.8.10 157 202 2.8E-17 T 29-03-2018 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 202 5.9E-65 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL539_RS17775 48fa44d0563fde6e7baaa6f7307c9f91 203 Pfam PF07499 RuvA, C-terminal domain 159 202 9.0E-17 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL539_RS01990 67433dc4650b8675394a19bdcee27f01 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 423 4.7E-59 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS01990 67433dc4650b8675394a19bdcee27f01 458 Pfam PF01554 MatE 252 413 1.6E-19 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS01990 67433dc4650b8675394a19bdcee27f01 458 Pfam PF01554 MatE 25 185 1.5E-25 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS01990 67433dc4650b8675394a19bdcee27f01 458 PIRSF PIRSF006603 9 458 7.0E-64 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS17675 f7fe01dd30af20658a8925f1cfa730ce 196 Gene3D G3DSA:3.30.1460.30 1 105 3.4E-24 T 29-03-2018 AL539_RS17675 f7fe01dd30af20658a8925f1cfa730ce 196 Pfam PF04993 TfoX N-terminal domain 12 103 3.5E-30 T 29-03-2018 IPR007076 TfoX, N-terminal AL539_RS17675 f7fe01dd30af20658a8925f1cfa730ce 196 Gene3D G3DSA:1.10.150.20 116 195 1.8E-21 T 29-03-2018 AL539_RS17675 f7fe01dd30af20658a8925f1cfa730ce 196 Pfam PF04994 TfoX C-terminal domain 115 193 1.1E-30 T 29-03-2018 IPR007077 TfoX, C-terminal AL539_RS17675 f7fe01dd30af20658a8925f1cfa730ce 196 SUPERFAMILY SSF159894 5 103 1.88E-30 T 29-03-2018 AL539_RS17675 f7fe01dd30af20658a8925f1cfa730ce 196 PIRSF PIRSF028788 1 196 7.3E-51 T 29-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 SUPERFAMILY SSF52540 540 713 1.06E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 SUPERFAMILY SSF52540 374 472 1.06E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 Pfam PF13538 UvrD-like helicase C-terminal domain 642 688 1.2E-14 T 29-03-2018 IPR027785 UvrD-like helicase C-terminal domain AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 Gene3D G3DSA:3.40.50.300 459 702 3.3E-36 T 29-03-2018 AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 Pfam PF13604 AAA domain 248 409 2.3E-30 T 29-03-2018 AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 711 50.238 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 713 4.1E-217 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 SUPERFAMILY SSF52540 239 454 5.9E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 SUPERFAMILY SSF52540 20 172 5.9E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08095 1c87c4437e1c9b4cc0ef2c2336c694df 715 Gene3D G3DSA:3.40.50.300 135 449 2.3E-60 T 29-03-2018 AL539_RS17395 81de39844c4f2a005a4e2dd77b73bc3b 180 Gene3D G3DSA:3.40.50.1820 1 178 8.5E-4 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS17395 81de39844c4f2a005a4e2dd77b73bc3b 180 SUPERFAMILY SSF53474 2 176 2.0E-6 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS17395 81de39844c4f2a005a4e2dd77b73bc3b 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.558 T 29-03-2018 IPR022987 Uncharacterised protein family UPF0227 AL539_RS17395 81de39844c4f2a005a4e2dd77b73bc3b 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.1E-69 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL539_RS11805 cc925b8d94fa3581e17781a503e2d35c 257 Pfam PF00899 ThiF family 10 251 1.2E-56 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL539_RS11805 cc925b8d94fa3581e17781a503e2d35c 257 Gene3D G3DSA:3.40.50.720 1 256 1.7E-60 T 29-03-2018 AL539_RS11805 cc925b8d94fa3581e17781a503e2d35c 257 SUPERFAMILY SSF69572 2 254 9.29E-70 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 Pfam PF00128 Alpha amylase, catalytic domain 76 422 1.4E-61 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 SMART SM00642 44 459 1.4E-71 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 SUPERFAMILY SSF49344 679 861 1.26E-20 T 29-03-2018 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 Gene3D G3DSA:2.60.40.1180 493 557 7.1E-8 T 29-03-2018 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 SUPERFAMILY SSF51445 32 465 3.77E-84 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 Gene3D G3DSA:3.20.20.80 451 492 5.4E-7 T 29-03-2018 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 Gene3D G3DSA:2.60.40.10 563 653 5.2E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 Gene3D G3DSA:3.20.20.80 31 450 1.5E-76 T 29-03-2018 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 682 863 8.3E-17 T 29-03-2018 IPR019248 Glucodextranase-like, C-terminal AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 SUPERFAMILY SSF51011 480 556 8.47E-8 T 29-03-2018 AL539_RS23440 eb589e02121bfea325ffc76298c15a1f 877 Gene3D G3DSA:2.60.40.1190 666 871 1.3E-34 T 29-03-2018 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:3.40.50.2300 1 126 9.2E-36 T 29-03-2018 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00072 Response regulator receiver domain 4 116 3.2E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 SMART SM00448 2 115 8.3E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:1.10.10.10 127 213 1.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.8E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.8E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.8E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF52172 2 132 1.18E-33 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 SMART SM00421 146 203 2.0E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05915 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF46894 136 210 1.39E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 Hamap MF_00318 Enolase [eno]. 2 417 44.408 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 PIRSF PIRSF001400 1 431 1.1E-191 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 SMART SM01193 4 134 2.8E-93 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-58 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 Gene3D G3DSA:3.30.390.10 3 127 2.5E-51 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 SMART SM01192 143 431 5.1E-213 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.2E-136 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 29-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 4.3E-206 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 SUPERFAMILY SSF54826 3 138 1.96E-56 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 Gene3D G3DSA:3.20.20.120 128 432 4.1E-100 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 SUPERFAMILY SSF51604 143 428 3.11E-126 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS08975 37bce93410e3155edfa1f4f00f24b0b2 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS21920 632b9d84533b6bfd22d65c66f7b46768 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.396 T 29-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AL539_RS21920 632b9d84533b6bfd22d65c66f7b46768 301 Gene3D G3DSA:3.30.1490.20 115 170 7.2E-11 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS21920 632b9d84533b6bfd22d65c66f7b46768 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.7E-67 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AL539_RS21920 632b9d84533b6bfd22d65c66f7b46768 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 5.2E-85 T 29-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AL539_RS21920 632b9d84533b6bfd22d65c66f7b46768 301 SUPERFAMILY SSF56059 98 288 4.6E-51 T 29-03-2018 AL539_RS21920 632b9d84533b6bfd22d65c66f7b46768 301 Gene3D G3DSA:3.30.470.20 171 277 5.3E-35 T 29-03-2018 AL539_RS21920 632b9d84533b6bfd22d65c66f7b46768 301 Gene3D G3DSA:3.40.50.20 1 114 3.1E-36 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Gene3D G3DSA:3.40.50.740 120 217 1.2E-26 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Gene3D G3DSA:2.40.40.20 765 951 5.7E-37 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Gene3D G3DSA:2.20.25.90 55 119 1.5E-15 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 PIRSF PIRSF036643 780 950 8.6E-16 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 PIRSF PIRSF036643 453 581 6.3E-10 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 PIRSF PIRSF036643 641 678 370.0 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 PIRSF PIRSF036643 11 442 2.1E-105 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Gene3D G3DSA:3.40.50.740 307 657 5.3E-58 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 SMART SM00926 61 115 3.9E-16 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Gene3D G3DSA:3.40.228.10 218 301 2.7E-20 T 29-03-2018 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 SUPERFAMILY SSF50692 752 782 4.97E-38 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 SUPERFAMILY SSF50692 813 951 4.97E-38 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 3.4E-20 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 1.5E-56 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03570 377f6df210969116b28f0eba6bddd851 951 SUPERFAMILY SSF53706 60 646 1.24E-201 T 29-03-2018 AL539_RS08595 8975d76585d593d509417078384cd2c0 409 SUPERFAMILY SSF111352 12 383 6.8E-106 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL539_RS08595 8975d76585d593d509417078384cd2c0 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 4.6E-206 T 29-03-2018 IPR019879 Ammonium transporter, marine subtype AL539_RS08595 8975d76585d593d509417078384cd2c0 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.3E-100 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL539_RS08595 8975d76585d593d509417078384cd2c0 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL539_RS08595 8975d76585d593d509417078384cd2c0 409 Gene3D G3DSA:1.10.3430.10 7 383 8.3E-107 T 29-03-2018 AL539_RS02815 4d24f6317ce06ab37483473cc5afc6d1 295 Pfam PF00892 EamA-like transporter family 3 125 5.2E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS02815 4d24f6317ce06ab37483473cc5afc6d1 295 Pfam PF00892 EamA-like transporter family 140 274 2.0E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS02815 4d24f6317ce06ab37483473cc5afc6d1 295 SUPERFAMILY SSF103481 204 270 4.18E-6 T 29-03-2018 AL539_RS02815 4d24f6317ce06ab37483473cc5afc6d1 295 SUPERFAMILY SSF103481 42 121 8.76E-7 T 29-03-2018 AL539_RS05445 d3d5a300d39becd6693474e2b88d3bd7 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 4.4E-11 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS05445 d3d5a300d39becd6693474e2b88d3bd7 96 Gene3D G3DSA:3.30.2310.20 1 95 1.8E-24 T 29-03-2018 AL539_RS05445 d3d5a300d39becd6693474e2b88d3bd7 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 2.5E-13 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS05445 d3d5a300d39becd6693474e2b88d3bd7 96 SUPERFAMILY SSF143011 1 82 3.92E-23 T 29-03-2018 IPR035095 Toxin RelE-like domain AL539_RS05455 d3d5a300d39becd6693474e2b88d3bd7 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 4.4E-11 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS05455 d3d5a300d39becd6693474e2b88d3bd7 96 Gene3D G3DSA:3.30.2310.20 1 95 1.8E-24 T 29-03-2018 AL539_RS05455 d3d5a300d39becd6693474e2b88d3bd7 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 2.5E-13 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS05455 d3d5a300d39becd6693474e2b88d3bd7 96 SUPERFAMILY SSF143011 1 82 3.92E-23 T 29-03-2018 IPR035095 Toxin RelE-like domain AL539_RS05410 d3d5a300d39becd6693474e2b88d3bd7 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 4.4E-11 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS05410 d3d5a300d39becd6693474e2b88d3bd7 96 Gene3D G3DSA:3.30.2310.20 1 95 1.8E-24 T 29-03-2018 AL539_RS05410 d3d5a300d39becd6693474e2b88d3bd7 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 2.5E-13 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS05410 d3d5a300d39becd6693474e2b88d3bd7 96 SUPERFAMILY SSF143011 1 82 3.92E-23 T 29-03-2018 IPR035095 Toxin RelE-like domain AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 Gene3D G3DSA:3.40.50.300 220 359 2.3E-21 T 29-03-2018 AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 SMART SM00487 1 178 1.2E-14 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 SUPERFAMILY SSF52540 48 188 1.93E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 SUPERFAMILY SSF52540 236 362 1.93E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 7.6E-24 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 Gene3D G3DSA:3.40.50.300 1 170 1.8E-27 T 29-03-2018 AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 Pfam PF00271 Helicase conserved C-terminal domain 240 342 5.1E-13 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS01960 ff410ef74aff72b70b751e25105d3747 583 SMART SM00490 265 344 1.2E-9 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS00600 f36f1a78f9752a98446427d90940b91b 85 SUPERFAMILY SSF47413 9 76 3.38E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS00600 f36f1a78f9752a98446427d90940b91b 85 Gene3D G3DSA:1.10.260.40 5 78 1.3E-10 T 29-03-2018 AL539_RS00600 f36f1a78f9752a98446427d90940b91b 85 Pfam PF13693 Winged helix-turn-helix DNA-binding 18 77 5.1E-16 T 29-03-2018 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 SUPERFAMILY SSF51055 388 437 4.45E-14 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 Gene3D G3DSA:2.40.10.10 34 66 9.6E-12 T 29-03-2018 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 Gene3D G3DSA:2.60.40.10 279 381 1.8E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 29-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 Pfam PF00089 Trypsin 34 259 1.0E-46 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 29-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 SUPERFAMILY SSF50494 12 265 9.56E-61 T 29-03-2018 IPR009003 Peptidase S1, PA clan AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 Gene3D G3DSA:2.40.10.10 67 128 2.5E-17 T 29-03-2018 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 SMART SM00495 390 435 9.2E-11 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 1.2E-11 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 1.2E-11 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 1.2E-11 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 Pfam PF02839 Carbohydrate binding domain 407 432 5.4E-5 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 Gene3D G3DSA:2.40.10.10 129 268 1.2E-33 T 29-03-2018 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 Gene3D G3DSA:2.10.10.20 389 433 2.0E-14 T 29-03-2018 AL539_RS04270 9cbec1d268a9ed76fdcf8751ac20c51f 443 SMART SM00020 33 260 3.7E-58 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL539_RS14680 0b0ab2e203e7999c24063342b5371d3a 142 PIRSF PIRSF026426 1 142 5.2E-46 T 29-03-2018 IPR010865 Protein of unknown function DUF1499 AL539_RS14680 0b0ab2e203e7999c24063342b5371d3a 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 135 5.1E-23 T 29-03-2018 IPR010865 Protein of unknown function DUF1499 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00690 Adhesin family signature 63 80 8.6E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00690 Adhesin family signature 50 63 8.6E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00690 Adhesin family signature 232 250 8.6E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00690 Adhesin family signature 179 200 8.6E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00691 Adhesin B signature 63 82 5.9E-6 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00691 Adhesin B signature 123 142 5.9E-6 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00691 Adhesin B signature 179 196 5.9E-6 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 PRINTS PR00691 Adhesin B signature 44 62 5.9E-6 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 SUPERFAMILY SSF53807 12 291 1.86E-79 T 29-03-2018 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 Gene3D G3DSA:3.40.50.1980 174 291 4.6E-29 T 29-03-2018 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 Gene3D G3DSA:3.40.50.1980 11 173 4.0E-47 T 29-03-2018 AL539_RS16820 0ed231bb5a356d29d6faf5c4576591ee 295 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 1.4E-62 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 Gene3D G3DSA:3.40.1160.10 4 245 3.2E-73 T 29-03-2018 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 Pfam PF00696 Amino acid kinase family 5 231 3.3E-52 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.3E-75 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 Gene3D G3DSA:3.30.70.260 246 282 0.18 T 29-03-2018 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 Gene3D G3DSA:3.30.70.260 311 382 1.3E-7 T 29-03-2018 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 PIRSF PIRSF000726 303 386 4.7 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 PIRSF PIRSF000726 60 318 1.7E-74 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 PIRSF PIRSF000726 3 62 4.2E-23 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS08905 0dd4673d6854840473edda6ec0821ef7 395 SUPERFAMILY SSF53633 6 242 1.44E-74 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 Gene3D G3DSA:1.10.1060.10 7 138 7.8E-39 T 29-03-2018 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 SUPERFAMILY SSF51971 143 407 8.24E-66 T 29-03-2018 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 SUPERFAMILY SSF46548 2 155 3.4E-36 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 Gene3D G3DSA:3.50.50.60 325 407 1.8E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 Gene3D G3DSA:3.50.50.60 240 324 2.8E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.9E-24 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 29-03-2018 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 29-03-2018 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 29-03-2018 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 29-03-2018 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 Gene3D G3DSA:3.50.50.60 408 486 8.1E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 Gene3D G3DSA:3.40.50.720 139 239 5.8E-19 T 29-03-2018 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.2E-198 T 29-03-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AL539_RS14695 324622d26bd0b70065b0fd5ad318720d 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.7E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS25905 49e944e35237f0fa68896f10705614fc 106 Gene3D G3DSA:3.30.70.1240 1 104 4.5E-30 T 29-03-2018 IPR023389 DOPA-like domain AL539_RS25905 49e944e35237f0fa68896f10705614fc 106 PIRSF PIRSF028139 1 106 3.8E-40 T 29-03-2018 IPR014980 Dopa 4,5-dioxygenase AL539_RS25905 49e944e35237f0fa68896f10705614fc 106 SUPERFAMILY SSF143410 1 102 5.1E-33 T 29-03-2018 IPR023389 DOPA-like domain AL539_RS25905 49e944e35237f0fa68896f10705614fc 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 6.7E-27 T 29-03-2018 IPR014980 Dopa 4,5-dioxygenase AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 SUPERFAMILY SSF53383 9 343 3.85E-75 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 Gene3D G3DSA:3.90.1150.10 1 57 0.0036 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 Gene3D G3DSA:3.40.640.10 58 239 1.5E-38 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 Pfam PF00155 Aminotransferase class I and II 42 337 4.3E-56 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 Gene3D G3DSA:3.90.1150.10 240 346 3.1E-12 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.356 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL539_RS01630 161d7f4b0e3cad9048d90fd1b009ecf5 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.3E-118 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL539_RS08000 5c3471bf71c5da5e9f0946c5c1580a2a 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 6.8E-76 T 29-03-2018 IPR012807 Anti-sigma factor ChrR, putative AL539_RS08000 5c3471bf71c5da5e9f0946c5c1580a2a 219 Pfam PF12973 ChrR Cupin-like domain 127 193 1.1E-12 T 29-03-2018 IPR025979 ChrR-like cupin domain AL539_RS08000 5c3471bf71c5da5e9f0946c5c1580a2a 219 Gene3D G3DSA:2.60.120.10 37 212 6.2E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS08000 5c3471bf71c5da5e9f0946c5c1580a2a 219 SUPERFAMILY SSF51182 113 203 3.47E-11 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS01510 c8d421730920243d1582effacbca788a 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.871 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL539_RS01510 c8d421730920243d1582effacbca788a 426 Pfam PF00202 Aminotransferase class-III 24 418 2.4E-128 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS01510 c8d421730920243d1582effacbca788a 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 2.1E-178 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL539_RS01510 c8d421730920243d1582effacbca788a 426 Gene3D G3DSA:3.40.640.10 49 312 3.8E-84 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS01510 c8d421730920243d1582effacbca788a 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS01510 c8d421730920243d1582effacbca788a 426 Gene3D G3DSA:3.90.1150.10 313 421 1.9E-9 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS01510 c8d421730920243d1582effacbca788a 426 SUPERFAMILY SSF53383 4 420 2.7E-136 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS01510 c8d421730920243d1582effacbca788a 426 PIRSF PIRSF000521 23 421 1.3E-35 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 Pfam PF03466 LysR substrate binding domain 89 290 4.9E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 Gene3D G3DSA:1.10.10.10 1 84 1.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 SUPERFAMILY SSF46785 1 112 1.72E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 Gene3D G3DSA:3.40.190.10 89 180 1.9E-19 T 29-03-2018 AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 Gene3D G3DSA:3.40.190.10 181 268 3.8E-16 T 29-03-2018 AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 SUPERFAMILY SSF53850 89 295 1.19E-39 T 29-03-2018 AL539_RS06055 d4a1b01d30cf10ad790c61db679b7efe 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 Gene3D G3DSA:3.40.50.10860 11 140 1.1E-49 T 29-03-2018 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.097 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-89 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 9.0E-39 T 29-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 SUPERFAMILY SSF51735 123 280 4.76E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 SUPERFAMILY SSF53223 1 122 7.87E-40 T 29-03-2018 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 Gene3D G3DSA:3.40.50.720 141 264 4.7E-41 T 29-03-2018 AL539_RS16945 ada4611f8550f85370b302ce844bc61a 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.0E-69 T 29-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 2.7E-115 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Pfam PF07840 FadR C-terminal domain 72 274 3.9E-69 T 29-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 SMART SM00345 12 71 1.6E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Gene3D G3DSA:1.20.120.530 80 279 7.7E-19 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Gene3D G3DSA:1.10.10.10 1 79 2.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.363 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 SUPERFAMILY SSF48008 178 270 1.7E-56 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS06535 a8e8b4f1cdde3a2acf22fa30dae4218d 279 SUPERFAMILY SSF48008 79 137 1.7E-56 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 PRINTS PR00313 NodO calcium binding signature 88 96 1.2E-11 T 29-03-2018 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 PRINTS PR00313 NodO calcium binding signature 106 114 1.2E-11 T 29-03-2018 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 PRINTS PR00313 NodO calcium binding signature 124 133 1.2E-11 T 29-03-2018 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 PRINTS PR00313 NodO calcium binding signature 76 87 1.2E-11 T 29-03-2018 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 SUPERFAMILY SSF51120 10 206 1.16E-27 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 26 58.0 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 51 67 0.0051 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.038 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 70 86 0.0051 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 37 50 2.2 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 Gene3D G3DSA:2.150.10.10 4 81 7.4E-15 T 29-03-2018 AL539_RS05945 f57397c6e3563d79bfe10a755ef8ec3e 236 Gene3D G3DSA:2.150.10.10 82 236 1.4E-19 T 29-03-2018 AL539_RS23035 5bbdfb3e0ffa5df6a6366fded8a4bcfc 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 177 2.6E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS23035 5bbdfb3e0ffa5df6a6366fded8a4bcfc 712 Gene3D G3DSA:2.170.130.10 39 183 1.3E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS23035 5bbdfb3e0ffa5df6a6366fded8a4bcfc 712 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 56 - T 29-03-2018 IPR010916 TonB box, conserved site AL539_RS23035 5bbdfb3e0ffa5df6a6366fded8a4bcfc 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 712 5.6E-164 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS23035 5bbdfb3e0ffa5df6a6366fded8a4bcfc 712 Gene3D G3DSA:2.40.170.20 188 712 4.9E-73 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS23035 5bbdfb3e0ffa5df6a6366fded8a4bcfc 712 Pfam PF00593 TonB dependent receptor 265 711 1.9E-47 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS23035 5bbdfb3e0ffa5df6a6366fded8a4bcfc 712 SUPERFAMILY SSF56935 39 712 3.66E-124 T 29-03-2018 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.134 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 3.6E-72 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 SUPERFAMILY SSF46557 3 78 1.44E-25 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 Gene3D G3DSA:1.10.287.180 3 75 2.1E-25 T 29-03-2018 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.7E-23 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.628 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 SUPERFAMILY SSF54534 80 156 4.71E-19 T 29-03-2018 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 5.2E-23 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 Gene3D G3DSA:3.10.50.30 76 163 2.7E-24 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS12985 6f36dc64f28d05fdda6ab8461e574053 163 PIRSF PIRSF006092 2 158 6.1E-43 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL539_RS06470 d77a6264ebd026dd4c7bb9af96dbe5c2 1024 SMART SM00316 37 119 1.1E-10 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS06470 d77a6264ebd026dd4c7bb9af96dbe5c2 1024 Gene3D G3DSA:2.40.50.140 33 124 3.9E-30 T 29-03-2018 AL539_RS06470 d77a6264ebd026dd4c7bb9af96dbe5c2 1024 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 7.5E-171 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL539_RS06470 d77a6264ebd026dd4c7bb9af96dbe5c2 1024 Pfam PF10150 Ribonuclease E/G family 121 390 2.2E-94 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL539_RS06470 d77a6264ebd026dd4c7bb9af96dbe5c2 1024 SUPERFAMILY SSF50249 40 124 3.73E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06470 d77a6264ebd026dd4c7bb9af96dbe5c2 1024 Pfam PF00575 S1 RNA binding domain 37 118 5.1E-14 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS06470 d77a6264ebd026dd4c7bb9af96dbe5c2 1024 Hamap MF_00970 Ribonuclease E [rne]. 1 1011 36.005 T 29-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 SMART SM00357 23 79 5.6E-9 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 SUPERFAMILY SSF50249 186 563 4.8E-107 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.164 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 SMART SM00955 193 523 2.2E-112 T 29-03-2018 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 SUPERFAMILY SSF50249 8 80 6.52E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 SMART SM00316 566 650 0.0078 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 SUPERFAMILY SSF50249 567 649 6.19E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 Gene3D G3DSA:2.40.50.140 566 651 1.3E-5 T 29-03-2018 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 SUPERFAMILY SSF50249 84 173 2.7E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 Pfam PF00773 RNB domain 193 521 3.3E-85 T 29-03-2018 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 Pfam PF08206 Ribonuclease B OB domain 24 78 1.7E-16 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 Pfam PF00575 S1 RNA binding domain 565 645 2.1E-9 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL539_RS25550 2a7a44333d30e19d31299d2f40f4a754 667 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 1.5E-181 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL539_RS06970 2fd5e1ddb1f6b4d01b1407ce63ec9c56 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.252 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL539_RS06970 2fd5e1ddb1f6b4d01b1407ce63ec9c56 146 PIRSF PIRSF006173 1 144 4.8E-65 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL539_RS06970 2fd5e1ddb1f6b4d01b1407ce63ec9c56 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.9E-8 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 SUPERFAMILY SSF47384 773 854 1.12E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 SMART SM00448 1026 1139 2.1E-15 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 5.9E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 1.0E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Gene3D G3DSA:3.40.50.2300 1017 1143 9.3E-17 T 29-03-2018 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 SUPERFAMILY SSF55785 626 741 2.3E-9 T 29-03-2018 IPR000014 PAS domain AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Gene3D G3DSA:3.30.565.10 848 1005 5.1E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 SUPERFAMILY SSF52172 1025 1142 1.57E-19 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 SMART SM00387 897 1006 1.9E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Gene3D G3DSA:1.10.287.130 765 847 6.4E-11 T 29-03-2018 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 6.5E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Gene3D G3DSA:3.30.450.20 624 763 1.4E-18 T 29-03-2018 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 Pfam PF12860 PAS fold 634 748 3.9E-44 T 29-03-2018 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 SUPERFAMILY SSF55874 843 1002 5.37E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 3.5E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 3.5E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 3.5E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 3.5E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10970 bb0c3514c003f87f3fa38911559f7bac 1143 SMART SM00388 788 853 5.2E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS21320 e184426aa7eae8a52f1b18c889497989 159 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 145 1.1E-31 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21320 e184426aa7eae8a52f1b18c889497989 159 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 26.88 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21320 e184426aa7eae8a52f1b18c889497989 159 Gene3D G3DSA:3.30.1060.10 1 155 4.4E-44 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21320 e184426aa7eae8a52f1b18c889497989 159 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 3.2E-44 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21320 e184426aa7eae8a52f1b18c889497989 159 SUPERFAMILY SSF55068 1 148 5.1E-50 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 29-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.346 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 SMART SM00387 32 189 8.1E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 Gene3D G3DSA:3.40.50.2300 350 572 4.1E-4 T 29-03-2018 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 3.0E-62 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 3.0E-62 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 3.0E-62 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 3.0E-62 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 3.0E-62 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 3.0E-62 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 3.0E-62 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 Pfam PF00183 Hsp90 protein 226 632 9.8E-126 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 SUPERFAMILY SSF55874 10 215 9.95E-64 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 SUPERFAMILY SSF110942 520 632 2.48E-33 T 29-03-2018 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 1.7E-12 T 29-03-2018 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 PIRSF PIRSF002583 1 634 7.4E-212 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 SUPERFAMILY SSF54211 238 493 7.51E-100 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS16660 2b5418aabb683f8672a14bc9e2a482b2 634 Gene3D G3DSA:3.30.565.10 34 228 9.4E-51 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05615 9de53530909a25a01b85512f547f0639 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.2E-226 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL539_RS05615 9de53530909a25a01b85512f547f0639 453 SUPERFAMILY SSF143548 16 157 4.18E-44 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL539_RS05615 9de53530909a25a01b85512f547f0639 453 Gene3D G3DSA:1.10.4100.10 253 444 2.0E-37 T 29-03-2018 AL539_RS05615 9de53530909a25a01b85512f547f0639 453 Pfam PF03315 Serine dehydratase beta chain 3 155 4.2E-54 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL539_RS05615 9de53530909a25a01b85512f547f0639 453 Gene3D G3DSA:3.30.1330.90 10 158 4.3E-50 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL539_RS05615 9de53530909a25a01b85512f547f0639 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 5.6E-97 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 SUPERFAMILY SSF64153 8 250 1.44E-63 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 214 5.5E-51 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 SUPERFAMILY SSF53613 229 507 8.35E-71 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 Gene3D G3DSA:3.40.50.10260 1 228 2.9E-61 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 Pfam PF01256 Carbohydrate kinase 253 502 1.2E-52 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 Pfam PF03853 YjeF-related protein N-terminus 32 193 4.1E-43 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 29-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 21.484 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 23.666 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 PIRSF PIRSF017184 7 512 1.6E-132 T 29-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 Gene3D G3DSA:3.40.1190.20 229 510 1.6E-48 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS20180 6699bed3e31454c19eac22f368021abc 513 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 506 2.5E-60 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SMART SM00387 402 518 1.4E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SMART SM00304 198 250 3.1E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 29-03-2018 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Gene3D G3DSA:3.40.50.2300 527 649 0.0055 T 29-03-2018 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SUPERFAMILY SSF52172 533 644 1.76E-7 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SMART SM00388 290 355 2.9E-24 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Gene3D G3DSA:1.20.120.160 826 929 3.3E-17 T 29-03-2018 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SUPERFAMILY SSF47226 764 777 4.71E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SUPERFAMILY SSF47226 819 919 4.71E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Pfam PF01627 Hpt domain 839 918 8.7E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 4.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 4.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 4.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 4.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SMART SM00073 829 927 2.0E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Gene3D G3DSA:1.10.287.130 280 351 9.1E-22 T 29-03-2018 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 5.4E-53 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Pfam PF00072 Response regulator receiver domain 670 780 1.6E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Gene3D G3DSA:3.40.50.2300 662 825 4.0E-40 T 29-03-2018 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.2E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 Gene3D G3DSA:3.30.565.10 359 526 1.6E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SUPERFAMILY SSF55874 344 516 3.67E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SMART SM00448 668 781 5.4E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS09010 504d65796a67653c3a41d61d9a46a9d8 932 SUPERFAMILY SSF52172 667 784 1.24E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 Gene3D G3DSA:1.10.287.130 194 265 1.3E-20 T 29-03-2018 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 Gene3D G3DSA:3.30.565.10 275 436 1.2E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 Pfam PF00072 Response regulator receiver domain 451 558 4.4E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.5E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 SMART SM00387 316 427 2.0E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 SUPERFAMILY SSF55874 258 425 8.51E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 SMART SM00388 204 269 3.8E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 Gene3D G3DSA:3.40.50.2300 446 566 1.5E-35 T 29-03-2018 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.3E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.1E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 SUPERFAMILY SSF47384 193 269 6.28E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 SUPERFAMILY SSF52172 446 565 1.85E-33 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS05595 04bdba4f128319f7b4acf65830d30d5f 566 SMART SM00448 449 560 4.7E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS13750 512ea0d3b78809d6f14310340e28de2d 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 6.8E-77 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL539_RS13750 512ea0d3b78809d6f14310340e28de2d 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 6.6E-88 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL539_RS13750 512ea0d3b78809d6f14310340e28de2d 183 Gene3D G3DSA:3.40.30.10 48 182 4.3E-4 T 29-03-2018 AL539_RS16710 fdd7afbf21e6f76ce0fe89a0b7178c1f 497 Gene3D G3DSA:3.30.1360.60 409 484 2.4E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS16710 fdd7afbf21e6f76ce0fe89a0b7178c1f 497 SUPERFAMILY SSF55604 410 484 3.27E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS16710 fdd7afbf21e6f76ce0fe89a0b7178c1f 497 Pfam PF00367 phosphotransferase system, EIIB 413 446 4.2E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS16710 fdd7afbf21e6f76ce0fe89a0b7178c1f 497 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 482 7.0E-216 T 29-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AL539_RS16710 fdd7afbf21e6f76ce0fe89a0b7178c1f 497 Pfam PF02378 Phosphotransferase system, EIIC 11 324 1.5E-77 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS16710 fdd7afbf21e6f76ce0fe89a0b7178c1f 497 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS16710 fdd7afbf21e6f76ce0fe89a0b7178c1f 497 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 6.9E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS14470 0d3dbe248aebd3fd2ece23f0bec281f0 142 PIRSF PIRSF002181 1 142 8.0E-53 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL539_RS14470 0d3dbe248aebd3fd2ece23f0bec281f0 142 Pfam PF00572 Ribosomal protein L13 15 138 3.6E-57 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL539_RS14470 0d3dbe248aebd3fd2ece23f0bec281f0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.467 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL539_RS14470 0d3dbe248aebd3fd2ece23f0bec281f0 142 SUPERFAMILY SSF52161 1 140 1.15E-60 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL539_RS14470 0d3dbe248aebd3fd2ece23f0bec281f0 142 Gene3D G3DSA:3.90.1180.10 1 142 2.5E-63 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL539_RS14470 0d3dbe248aebd3fd2ece23f0bec281f0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.4E-65 T 29-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14470 0d3dbe248aebd3fd2ece23f0bec281f0 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 29-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AL539_RS24530 48b71f9292c4a3ea7fdb0ba5cd56e133 345 Pfam PF01032 FecCD transport family 19 338 3.0E-91 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS24530 48b71f9292c4a3ea7fdb0ba5cd56e133 345 Gene3D G3DSA:1.10.3470.10 4 345 1.5E-72 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS24530 48b71f9292c4a3ea7fdb0ba5cd56e133 345 SUPERFAMILY SSF81345 5 339 2.88E-83 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS01860 dc298b6861ecaeee0a8250ddb0a0af9f 313 Gene3D G3DSA:3.40.50.150 135 300 3.4E-22 T 29-03-2018 AL539_RS01860 dc298b6861ecaeee0a8250ddb0a0af9f 313 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 4.1E-176 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL539_RS01860 dc298b6861ecaeee0a8250ddb0a0af9f 313 SUPERFAMILY SSF53335 9 287 2.48E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS04035 6a1b5515a0c07a91733c701a7820d4be 467 Gene3D G3DSA:1.10.287.950 232 419 3.5E-51 T 29-03-2018 AL539_RS04035 6a1b5515a0c07a91733c701a7820d4be 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 251 431 3.7E-38 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS04035 6a1b5515a0c07a91733c701a7820d4be 467 SMART SM00283 205 466 8.0E-59 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS04035 6a1b5515a0c07a91733c701a7820d4be 467 SUPERFAMILY SSF58104 157 466 2.35E-66 T 29-03-2018 AL539_RS04035 6a1b5515a0c07a91733c701a7820d4be 467 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 148 415 0.002 T 29-03-2018 AL539_RS04035 6a1b5515a0c07a91733c701a7820d4be 467 Gene3D G3DSA:1.10.287.500 167 231 0.0064 T 29-03-2018 AL539_RS04035 6a1b5515a0c07a91733c701a7820d4be 467 Gene3D G3DSA:1.10.287.500 420 466 0.31 T 29-03-2018 AL539_RS12850 a50d3d966780bff5a41a08e1d2ac08da 314 PIRSF PIRSF035875 10 295 9.6E-53 T 29-03-2018 IPR017039 Virulence factor BrkB AL539_RS12850 a50d3d966780bff5a41a08e1d2ac08da 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 3.3E-80 T 29-03-2018 IPR017039 Virulence factor BrkB AL539_RS12850 a50d3d966780bff5a41a08e1d2ac08da 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 296 23.616 T 29-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AL539_RS12850 a50d3d966780bff5a41a08e1d2ac08da 314 Pfam PF03631 Virulence factor BrkB 33 280 2.4E-58 T 29-03-2018 IPR017039 Virulence factor BrkB AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 1.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 887 1.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 1.2E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SUPERFAMILY SSF47226 1122 1212 2.49E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:3.30.565.10 727 890 2.5E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SUPERFAMILY SSF47384 652 733 2.35E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SMART SM00062 267 481 6.0E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SMART SM00062 33 244 7.4E-6 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SMART SM00387 779 890 7.3E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:3.40.190.10 24 186 7.0E-16 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 732 7.4E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:3.40.50.2300 994 1104 9.6E-30 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:3.30.450.20 578 671 1.3E-13 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Pfam PF00072 Response regulator receiver domain 996 1106 2.8E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 234 5.2E-20 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 274 478 2.3E-13 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 889 2.3E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SUPERFAMILY SSF53850 56 234 3.04E-23 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SUPERFAMILY SSF53850 270 481 6.19E-16 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:3.40.190.10 369 444 0.0012 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SMART SM00388 667 732 4.6E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:1.20.120.160 1105 1219 1.1E-4 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SMART SM00448 994 1107 4.3E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:1.10.287.130 672 726 3.1E-16 T 29-03-2018 AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SUPERFAMILY SSF52172 995 1112 1.31E-29 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 SUPERFAMILY SSF55874 721 892 5.5E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19195 db4206c1d385ed63635acdbd53cd16ec 1221 Gene3D G3DSA:3.40.190.10 262 368 6.8E-7 T 29-03-2018 AL539_RS11595 8fa53720c3b54b05cf149c2d3bbb73b2 104 SMART SM01219 1 104 6.2E-55 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS11595 8fa53720c3b54b05cf149c2d3bbb73b2 104 Gene3D G3DSA:3.30.920.10 1 104 1.0E-30 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS11595 8fa53720c3b54b05cf149c2d3bbb73b2 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.4E-42 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS11595 8fa53720c3b54b05cf149c2d3bbb73b2 104 Pfam PF01491 Frataxin-like domain 1 100 2.1E-29 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS11595 8fa53720c3b54b05cf149c2d3bbb73b2 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 29-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS11595 8fa53720c3b54b05cf149c2d3bbb73b2 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.592 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS11595 8fa53720c3b54b05cf149c2d3bbb73b2 104 SUPERFAMILY SSF55387 1 103 9.42E-39 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 SUPERFAMILY SSF51735 143 306 1.72E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 Pfam PF00107 Zinc-binding dehydrogenase 177 304 3.2E-16 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 Gene3D G3DSA:3.90.180.10 287 344 0.028 T 29-03-2018 AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 SMART SM00829 12 341 0.0099 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 Gene3D G3DSA:3.40.50.720 169 286 6.4E-18 T 29-03-2018 AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 SUPERFAMILY SSF50129 11 176 1.67E-33 T 29-03-2018 IPR011032 GroES-like AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 Gene3D G3DSA:3.90.180.10 1 168 9.7E-36 T 29-03-2018 AL539_RS20935 5af171739d9d1f7431bfe96bc53a3d90 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 104 1.9E-11 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 SMART SM00843 947 1012 5.3E-38 T 29-03-2018 IPR018541 FtsK gamma domain AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 1.3E-41 T 29-03-2018 IPR025199 DNA translocase FtsK, 4TM region AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 Pfam PF01580 FtsK/SpoIIIE family 630 843 6.3E-71 T 29-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 SUPERFAMILY SSF52540 604 916 2.66E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 Pfam PF09397 Ftsk gamma domain 949 1009 1.1E-25 T 29-03-2018 IPR018541 FtsK gamma domain AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 Gene3D G3DSA:1.10.10.10 949 1003 6.7E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 SUPERFAMILY SSF46785 947 1012 4.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01475 0c4b82b9a16d452940d92b2be11c3912 1015 Gene3D G3DSA:3.40.50.300 387 882 1.4E-52 T 29-03-2018 AL539_RS04225 2a256240d09601db3e63693ed342abed 309 Gene3D G3DSA:3.40.190.10 88 174 6.5E-11 T 29-03-2018 AL539_RS04225 2a256240d09601db3e63693ed342abed 309 Gene3D G3DSA:1.10.10.10 4 86 8.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04225 2a256240d09601db3e63693ed342abed 309 SUPERFAMILY SSF53850 89 297 7.14E-35 T 29-03-2018 AL539_RS04225 2a256240d09601db3e63693ed342abed 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04225 2a256240d09601db3e63693ed342abed 309 Pfam PF03466 LysR substrate binding domain 88 295 2.4E-33 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS04225 2a256240d09601db3e63693ed342abed 309 SUPERFAMILY SSF46785 5 87 1.46E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04225 2a256240d09601db3e63693ed342abed 309 Gene3D G3DSA:3.40.190.10 175 267 5.6E-14 T 29-03-2018 AL539_RS23425 2de1eae48c4b5c9673e109616e4ef4fa 326 Pfam PF00581 Rhodanese-like domain 116 210 2.1E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS23425 2de1eae48c4b5c9673e109616e4ef4fa 326 SMART SM00450 113 214 2.8E-22 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS23425 2de1eae48c4b5c9673e109616e4ef4fa 326 Gene3D G3DSA:3.90.10.10 224 324 8.2E-4 T 29-03-2018 AL539_RS23425 2de1eae48c4b5c9673e109616e4ef4fa 326 Gene3D G3DSA:3.40.250.10 107 220 4.4E-29 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS23425 2de1eae48c4b5c9673e109616e4ef4fa 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.446 T 29-03-2018 IPR020936 Uncharacterised protein family UPF0176 AL539_RS23425 2de1eae48c4b5c9673e109616e4ef4fa 326 SUPERFAMILY SSF52821 94 240 2.88E-32 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS17480 6070689991a4a7d74815a6b15fa609a0 644 Gene3D G3DSA:3.40.50.300 56 367 7.6E-11 T 29-03-2018 AL539_RS17480 6070689991a4a7d74815a6b15fa609a0 644 SUPERFAMILY SSF52540 73 145 6.53E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17480 6070689991a4a7d74815a6b15fa609a0 644 SUPERFAMILY SSF52540 236 368 6.53E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17480 6070689991a4a7d74815a6b15fa609a0 644 SMART SM00763 19 380 2.8E-221 T 29-03-2018 IPR013153 PrkA AAA domain AL539_RS17480 6070689991a4a7d74815a6b15fa609a0 644 PIRSF PIRSF000549 1 644 4.0E-290 T 29-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AL539_RS17480 6070689991a4a7d74815a6b15fa609a0 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 9.5E-73 T 29-03-2018 IPR010650 PrkA C-terminal domain AL539_RS17480 6070689991a4a7d74815a6b15fa609a0 644 Pfam PF08298 PrkA AAA domain 19 380 3.1E-177 T 29-03-2018 IPR013153 PrkA AAA domain AL539_RS16925 8f5fad70fc8179828ee334faf45281eb 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-35 T 29-03-2018 IPR027354 YcgL domain AL539_RS16925 8f5fad70fc8179828ee334faf45281eb 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.365 T 29-03-2018 IPR027354 YcgL domain AL539_RS16925 8f5fad70fc8179828ee334faf45281eb 93 SUPERFAMILY SSF160191 1 91 1.57E-37 T 29-03-2018 AL539_RS16925 8f5fad70fc8179828ee334faf45281eb 93 Pfam PF05166 YcgL domain 3 74 3.9E-32 T 29-03-2018 IPR027354 YcgL domain AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF01842 ACT domain 802 846 1.3E-7 T 29-03-2018 IPR002912 ACT domain AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Gene3D G3DSA:3.30.460.10 27 170 9.7E-26 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 336.822 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Gene3D G3DSA:1.20.120.330 173 317 3.5E-24 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF01966 HD domain 452 584 1.7E-13 T 29-03-2018 IPR006674 HD domain AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Gene3D G3DSA:3.30.70.260 682 764 5.2E-8 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 9.7E-36 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 SMART SM00471 447 594 4.9E-10 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Gene3D G3DSA:1.10.3090.10 374 636 2.7E-41 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 30 868 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF109604 418 596 8.16E-14 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Gene3D G3DSA:3.30.70.260 793 874 9.1E-12 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF01909 Nucleotidyltransferase domain 57 111 9.7E-8 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 PIRSF PIRSF006288 7 874 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF81301 43 171 2.62E-19 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF55021 689 761 2.18E-8 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF55021 797 860 1.2E-10 T 29-03-2018 AL539_RS07775 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF81593 187 310 2.2E-9 T 29-03-2018 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 SUPERFAMILY SSF56327 146 309 6.64E-43 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 SUPERFAMILY SSF51735 1 145 5.57E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 Gene3D G3DSA:3.90.110.10 148 311 4.2E-46 T 29-03-2018 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.545 T 29-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 1.5E-130 T 29-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 PIRSF PIRSF000102 1 308 4.0E-63 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.7E-47 T 29-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 4.5E-50 T 29-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 Gene3D G3DSA:3.40.50.720 2 147 8.1E-42 T 29-03-2018 AL539_RS13910 3707ec2f9e7b2e4bbb43d3942189781e 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 29-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.5E-47 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 Gene3D G3DSA:3.90.105.10 31 64 1.1E-10 T 29-03-2018 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 3.2E-25 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 SUPERFAMILY SSF63867 332 410 2.49E-23 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 Gene3D G3DSA:2.170.190.11 65 145 1.8E-27 T 29-03-2018 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 1.7E-32 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 SUPERFAMILY SSF53218 181 327 9.55E-42 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 Gene3D G3DSA:2.40.340.10 333 404 2.1E-19 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 SMART SM00852 184 321 7.4E-42 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 6.5E-22 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 Gene3D G3DSA:3.40.980.10 154 328 4.4E-51 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS20225 1d470f1368a5d97bda42af6418a878e2 411 SUPERFAMILY SSF63882 7 180 1.28E-56 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 2.2E-29 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 SMART SM00487 20 229 3.9E-56 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Gene3D G3DSA:3.40.50.300 223 407 1.8E-44 T 29-03-2018 AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 2.0E-51 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 SUPERFAMILY SSF52540 75 356 5.34E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Gene3D G3DSA:3.40.50.300 6 222 3.5E-57 T 29-03-2018 AL539_RS25490 fd5b5e0afb81ed2ef5a40b340d68be5a 430 SMART SM00490 258 339 8.2E-31 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 2.7E-124 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 SUPERFAMILY SSF103039 54 230 5.75E-21 T 29-03-2018 IPR028976 CheC-like domain AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 SUPERFAMILY SSF103039 4 13 5.75E-21 T 29-03-2018 IPR028976 CheC-like domain AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 Gene3D G3DSA:2.30.330.10 237 328 6.6E-17 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 SUPERFAMILY SSF101801 247 322 3.79E-14 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 Gene3D G3DSA:3.40.1550.10 45 234 2.4E-43 T 29-03-2018 IPR028976 CheC-like domain AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.2E-17 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 PIRSF PIRSF002888 1 328 5.0E-93 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL539_RS07370 dc50a37193746ea77bf45d877d27c793 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.5E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 SUPERFAMILY SSF51735 3 240 9.09E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 Gene3D G3DSA:3.40.50.720 42 243 3.7E-49 T 29-03-2018 AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 Gene3D G3DSA:3.40.50.720 1 41 7.5E-9 T 29-03-2018 AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 239 2.3E-51 T 29-03-2018 AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.5E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.5E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 5.5E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.5E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.5E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS23150 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.5E-30 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS12000 1c49abcbe628a339a75c2bfffee97b41 369 Pfam PF02481 DNA recombination-mediator protein A 77 280 9.0E-78 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL539_RS12000 1c49abcbe628a339a75c2bfffee97b41 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 288 2.8E-79 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL539_RS12000 1c49abcbe628a339a75c2bfffee97b41 369 Gene3D G3DSA:3.40.50.450 115 265 7.3E-42 T 29-03-2018 AL539_RS12000 1c49abcbe628a339a75c2bfffee97b41 369 SUPERFAMILY SSF102405 83 290 1.47E-42 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 Gene3D G3DSA:3.40.50.720 175 349 6.5E-28 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 336 1.0E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PIRSF PIRSF000350 3 473 6.8E-70 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 SUPERFAMILY SSF55424 354 473 1.58E-30 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 SUPERFAMILY SSF51905 15 329 1.02E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 66 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 3.8E-52 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 Gene3D G3DSA:3.30.390.30 350 473 8.8E-35 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 467 8.4E-30 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 12 476 65.11 T 29-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 3.5E-28 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 3.5E-28 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 3.5E-28 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 188 206 3.5E-28 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.5E-28 T 29-03-2018 AL539_RS11375 455b509a6e7547c6e99fd4dc5c8d216e 476 Gene3D G3DSA:3.50.50.60 14 173 5.6E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS13275 8a1b2f3b970d7de99d53ea7f72ff247b 313 SUPERFAMILY SSF51735 1 308 6.89E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13275 8a1b2f3b970d7de99d53ea7f72ff247b 313 Gene3D G3DSA:3.90.25.10 189 312 4.2E-16 T 29-03-2018 AL539_RS13275 8a1b2f3b970d7de99d53ea7f72ff247b 313 Gene3D G3DSA:3.40.50.720 1 188 1.1E-19 T 29-03-2018 AL539_RS13275 8a1b2f3b970d7de99d53ea7f72ff247b 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 2.7E-44 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL539_RS13275 8a1b2f3b970d7de99d53ea7f72ff247b 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 312 46.194 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL539_RS13275 8a1b2f3b970d7de99d53ea7f72ff247b 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 3.5E-126 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL539_RS20980 07dec0198c2ce60d2662f42461f04c66 467 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS20980 07dec0198c2ce60d2662f42461f04c66 467 Gene3D G3DSA:3.40.640.10 69 332 5.3E-63 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS20980 07dec0198c2ce60d2662f42461f04c66 467 PIRSF PIRSF000521 36 455 5.3E-34 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS20980 07dec0198c2ce60d2662f42461f04c66 467 Gene3D G3DSA:3.90.1150.10 333 466 3.8E-29 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS20980 07dec0198c2ce60d2662f42461f04c66 467 SUPERFAMILY SSF53383 32 454 4.71E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS20980 07dec0198c2ce60d2662f42461f04c66 467 Pfam PF00202 Aminotransferase class-III 34 452 2.5E-80 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS03255 895fafc565079a3800f87f726057a924 513 SMART SM01079 75 274 3.2E-25 T 29-03-2018 IPR006189 CHASE domain AL539_RS03255 895fafc565079a3800f87f726057a924 513 SMART SM00267 346 512 7.5E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03255 895fafc565079a3800f87f726057a924 513 Gene3D G3DSA:3.30.70.270 350 513 7.3E-42 T 29-03-2018 AL539_RS03255 895fafc565079a3800f87f726057a924 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 508 2.6E-33 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03255 895fafc565079a3800f87f726057a924 513 Pfam PF03924 CHASE domain 86 272 3.2E-22 T 29-03-2018 IPR006189 CHASE domain AL539_RS03255 895fafc565079a3800f87f726057a924 513 SUPERFAMILY SSF55073 362 511 2.59E-36 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS03255 895fafc565079a3800f87f726057a924 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 511 2.5E-32 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 3.2E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF52833 1 101 1.34E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF52833 104 197 1.97E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 1.5E-247 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PIRSF PIRSF000238 1 522 2.6E-254 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.50.50.60 373 520 3.4E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 6.0E-35 T 29-03-2018 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.0E-35 T 29-03-2018 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 6.0E-35 T 29-03-2018 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 6.0E-35 T 29-03-2018 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 6.0E-35 T 29-03-2018 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 Pfam PF13192 Thioredoxin domain 120 194 5.7E-12 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.50.50.60 200 372 6.7E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.40.30.10 104 197 6.4E-7 T 29-03-2018 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF51905 203 516 9.26E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.40.30.10 1 94 4.9E-26 T 29-03-2018 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS22920 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 6.1E-60 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS18490 003fcbc747f4ad90630c5d810d53ef25 128 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 2.4E-42 T 29-03-2018 IPR021753 Protein of unknown function DUF3319 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-19 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.9E-19 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.9E-19 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 Pfam PF01632 Ribosomal protein L35 2 61 1.6E-21 T 29-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.1E-27 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 29-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 SUPERFAMILY SSF143034 2 63 8.24E-21 T 29-03-2018 AL539_RS02275 267e5aad6a1add6a5bc47665b5a5bf6a 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.995 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Pfam PF00037 4Fe-4S binding domain 687 704 1.7E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 SUPERFAMILY SSF54862 567 708 7.11E-20 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:3.30.70.20 695 727 1.7E-5 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1148 1165 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 SUPERFAMILY SSF50692 1253 1394 7.69E-40 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:3.40.50.740 976 1244 8.8E-85 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 719 771 3.1E-15 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Pfam PF00384 Molybdopterin oxidoreductase 776 1202 3.4E-88 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 174 2.3E-18 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:1.10.1060.10 520 641 3.9E-15 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:1.10.1060.10 57 190 3.5E-27 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:3.40.50.740 777 975 1.5E-48 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 723 740 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 SUPERFAMILY SSF53706 714 1250 2.36E-203 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 SMART SM00926 718 773 2.2E-16 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:3.40.50.720 191 283 5.0E-16 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.4E-14 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.4E-14 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.4E-14 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Pfam PF01568 Molydopterin dinucleotide binding domain 1285 1389 1.3E-29 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 9.0E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 SUPERFAMILY SSF54292 1 98 4.65E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:3.50.50.60 284 336 1.4E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 SUPERFAMILY SSF51971 190 430 2.0E-61 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:2.20.25.90 728 774 4.1E-17 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:3.50.50.60 337 511 6.3E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:2.40.40.20 1245 1412 3.6E-37 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 SUPERFAMILY SSF46548 88 200 1.31E-16 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 4.8E-10 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 Gene3D G3DSA:3.30.70.20 642 694 2.9E-12 T 29-03-2018 AL539_RS24810 5b964db45126e8028894f4abd4e67911 1412 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 723 1393 7.5E-247 T 29-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AL539_RS14515 755a7c777c655f71ac8437f33d504c50 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 3.5E-28 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL539_RS14515 755a7c777c655f71ac8437f33d504c50 122 SUPERFAMILY SSF52980 7 112 7.37E-22 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS14515 755a7c777c655f71ac8437f33d504c50 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 5.4E-35 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL539_RS14515 755a7c777c655f71ac8437f33d504c50 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.901 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AL539_RS14515 755a7c777c655f71ac8437f33d504c50 122 Gene3D G3DSA:3.40.1350.10 13 122 2.2E-34 T 29-03-2018 AL539_RS22810 1720273bd6cbe9dedc73f19a206fcb1e 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 487 1.4E-215 T 29-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AL539_RS22810 1720273bd6cbe9dedc73f19a206fcb1e 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 1.3E-94 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS22810 1720273bd6cbe9dedc73f19a206fcb1e 497 Pfam PF00474 Sodium:solute symporter family 36 437 4.2E-105 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS09820 811521160143e0292a8aca53be507236 952 Gene3D G3DSA:1.10.287.380 878 947 5.5E-27 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL539_RS09820 811521160143e0292a8aca53be507236 952 SUPERFAMILY SSF46589 885 948 8.37E-18 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL539_RS09820 811521160143e0292a8aca53be507236 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 3.1E-18 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL539_RS09820 811521160143e0292a8aca53be507236 952 SUPERFAMILY SSF52374 364 571 7.58E-136 T 29-03-2018 AL539_RS09820 811521160143e0292a8aca53be507236 952 SUPERFAMILY SSF52374 1 192 7.58E-136 T 29-03-2018 AL539_RS09820 811521160143e0292a8aca53be507236 952 SUPERFAMILY SSF52374 609 641 7.58E-136 T 29-03-2018 AL539_RS09820 811521160143e0292a8aca53be507236 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL539_RS09820 811521160143e0292a8aca53be507236 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL539_RS09820 811521160143e0292a8aca53be507236 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL539_RS09820 811521160143e0292a8aca53be507236 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL539_RS09820 811521160143e0292a8aca53be507236 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL539_RS09820 811521160143e0292a8aca53be507236 952 SUPERFAMILY SSF50677 191 365 2.88E-58 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL539_RS09820 811521160143e0292a8aca53be507236 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 2.0E-226 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS09820 811521160143e0292a8aca53be507236 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 4.2E-39 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL539_RS09820 811521160143e0292a8aca53be507236 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL539_RS09820 811521160143e0292a8aca53be507236 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS09820 811521160143e0292a8aca53be507236 952 SUPERFAMILY SSF47323 642 899 1.29E-64 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS09820 811521160143e0292a8aca53be507236 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.039 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL539_RS09820 811521160143e0292a8aca53be507236 952 Gene3D G3DSA:3.40.50.620 2 630 4.8E-135 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS09820 811521160143e0292a8aca53be507236 952 Gene3D G3DSA:1.10.730.10 631 817 2.0E-48 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 Pfam PF08447 PAS fold 166 251 4.4E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 Gene3D G3DSA:3.40.50.10600 138 259 4.7E-34 T 29-03-2018 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 Gene3D G3DSA:1.10.287.950 260 437 7.9E-44 T 29-03-2018 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 435 7.5E-35 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SMART SM00091 141 211 0.0034 T 29-03-2018 IPR000014 PAS domain AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SMART SM00091 19 88 19.0 T 29-03-2018 IPR000014 PAS domain AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SUPERFAMILY SSF58104 235 434 3.01E-53 T 29-03-2018 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SUPERFAMILY SSF58104 172 194 3.01E-53 T 29-03-2018 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 Gene3D G3DSA:3.30.450.20 4 137 9.3E-13 T 29-03-2018 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SUPERFAMILY SSF55785 7 128 1.74E-10 T 29-03-2018 IPR000014 PAS domain AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SMART SM00283 247 434 6.6E-16 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SMART SM00086 216 258 7.9E-4 T 29-03-2018 IPR001610 PAC motif AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SMART SM00086 94 136 24.0 T 29-03-2018 IPR001610 PAC motif AL539_RS25685 5340fa68829547f9af21b19b661429de 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 264 6.7E-19 T 29-03-2018 IPR000014 PAS domain AL539_RS25685 5340fa68829547f9af21b19b661429de 437 Pfam PF13426 PAS domain 37 132 8.5E-8 T 29-03-2018 IPR000014 PAS domain AL539_RS25685 5340fa68829547f9af21b19b661429de 437 SUPERFAMILY SSF55785 131 256 2.02E-19 T 29-03-2018 IPR000014 PAS domain AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 SMART SM00897 27 214 4.3E-26 T 29-03-2018 IPR013702 FIST domain, N-terminal AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 1.7E-6 T 29-03-2018 IPR000160 GGDEF domain AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 SUPERFAMILY SSF141868 598 825 4.45E-56 T 29-03-2018 IPR001633 EAL domain AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 SUPERFAMILY SSF55073 419 524 4.63E-8 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 Gene3D G3DSA:3.20.20.450 582 827 1.2E-57 T 29-03-2018 IPR001633 EAL domain AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 Pfam PF10442 FIST C domain 215 338 3.7E-12 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 Pfam PF08495 FIST N domain 31 212 8.1E-19 T 29-03-2018 IPR013702 FIST domain, N-terminal AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 SMART SM01204 215 341 3.2E-18 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 Gene3D G3DSA:3.30.70.270 403 566 3.7E-14 T 29-03-2018 AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 Pfam PF00563 EAL domain 598 824 4.2E-56 T 29-03-2018 IPR001633 EAL domain AL539_RS11560 88cc94c2947b99b18c7b63f2a0dfbc5e 828 SMART SM00052 590 828 2.6E-31 T 29-03-2018 IPR001633 EAL domain AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 2.1E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.1E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.1E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 2.1E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 7.0E-33 T 29-03-2018 IPR023214 HAD-like domain AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 Gene3D G3DSA:3.40.50.1000 1 202 8.7E-38 T 29-03-2018 IPR023214 HAD-like domain AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 SUPERFAMILY SSF56784 1 213 1.02E-50 T 29-03-2018 IPR023214 HAD-like domain AL539_RS24265 829b53bbde8dfadc570c83cbaf8aef08 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 182 7.1E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 469 1.3E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 SMART SM00448 503 617 5.6E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 SUPERFAMILY SSF47384 229 309 1.43E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 SUPERFAMILY SSF55874 297 473 3.93E-49 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Gene3D G3DSA:3.30.450.20 69 247 9.0E-4 T 29-03-2018 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Gene3D G3DSA:3.40.50.2300 489 629 3.7E-41 T 29-03-2018 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 SMART SM00388 243 308 7.1E-25 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 42 145 2.0E-15 T 29-03-2018 IPR033414 Periplasmic sensor domain AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Gene3D G3DSA:3.30.565.10 312 480 1.7E-50 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 SUPERFAMILY SSF52172 502 623 6.12E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Gene3D G3DSA:1.10.287.130 248 304 2.9E-20 T 29-03-2018 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Pfam PF00072 Response regulator receiver domain 505 616 2.7E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 4.1E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS22630 d0e17d9c73edf307ef73e43b2f88cfb2 632 SMART SM00387 355 471 4.5E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 7.5E-185 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 9.1E-79 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 PIRSF PIRSF000235 1 347 2.9E-195 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 Gene3D G3DSA:3.20.20.70 8 341 2.3E-84 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 54.823 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 SMART SM01240 7 344 9.4E-135 T 29-03-2018 AL539_RS20175 720ae35d0761863f6239a7569ea30804 347 SUPERFAMILY SSF51412 6 336 4.58E-98 T 29-03-2018 AL539_RS22560 aa342adac93bb9e92f3ca4eab391a4db 128 SUPERFAMILY SSF52833 2 40 9.81E-5 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS22560 aa342adac93bb9e92f3ca4eab391a4db 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 4.5E-25 T 29-03-2018 IPR007263 Protein of unknown function DUF393 AL539_RS22560 aa342adac93bb9e92f3ca4eab391a4db 128 Gene3D G3DSA:3.40.30.10 1 65 1.9E-5 T 29-03-2018 AL539_RS13435 8d029443a340e1d856fed1afc0ce55e7 80 Gene3D G3DSA:1.20.5.370 13 43 6.2E-12 T 29-03-2018 AL539_RS13435 8d029443a340e1d856fed1afc0ce55e7 80 Gene3D G3DSA:1.20.5.370 44 80 4.6E-9 T 29-03-2018 AL539_RS13435 8d029443a340e1d856fed1afc0ce55e7 80 Pfam PF06005 Cell division protein ZapB 1 78 1.4E-25 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL539_RS13435 8d029443a340e1d856fed1afc0ce55e7 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.126 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL539_RS11360 20823e2f4ead2726133ad9d594b968cb 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site AL539_RS11360 20823e2f4ead2726133ad9d594b968cb 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 1.5E-191 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL539_RS11360 20823e2f4ead2726133ad9d594b968cb 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.932 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL539_RS11360 20823e2f4ead2726133ad9d594b968cb 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL539_RS11360 20823e2f4ead2726133ad9d594b968cb 369 SUPERFAMILY SSF53335 10 367 8.59E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS11360 20823e2f4ead2726133ad9d594b968cb 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 8.6E-188 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL539_RS11360 20823e2f4ead2726133ad9d594b968cb 369 Gene3D G3DSA:3.40.50.150 155 368 5.2E-32 T 29-03-2018 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 Gene3D G3DSA:3.30.360.10 194 489 9.3E-126 T 29-03-2018 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 4.8E-203 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 3.9E-115 T 29-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 1.0E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 1.0E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 1.0E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 1.0E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 1.0E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 SUPERFAMILY SSF51735 4 195 9.65E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 Gene3D G3DSA:3.40.50.720 5 193 8.9E-71 T 29-03-2018 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 85.284 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 29-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 PIRSF PIRSF000110 2 490 3.1E-177 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 6.7E-64 T 29-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL539_RS04600 dca768dc4773322ff9d5ebaffe55c349 501 SUPERFAMILY SSF55347 182 490 2.78E-113 T 29-03-2018 AL539_RS26015 9b8fd0ee4888a707649469d56bd6c695 317 SUPERFAMILY SSF52418 73 311 9.42E-43 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS26015 9b8fd0ee4888a707649469d56bd6c695 317 SUPERFAMILY SSF47648 8 72 6.41E-15 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS26015 9b8fd0ee4888a707649469d56bd6c695 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 68 7.0E-11 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS26015 9b8fd0ee4888a707649469d56bd6c695 317 Gene3D G3DSA:3.40.1030.10 75 293 2.3E-33 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS26015 9b8fd0ee4888a707649469d56bd6c695 317 Gene3D G3DSA:1.20.970.10 5 74 8.3E-16 T 29-03-2018 AL539_RS26015 9b8fd0ee4888a707649469d56bd6c695 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 253 3.7E-5 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS15075 fc115009c78ec0fac7392531f842bef1 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 3.3E-72 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL539_RS15075 fc115009c78ec0fac7392531f842bef1 242 SUPERFAMILY SSF64438 3 241 1.47E-82 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL539_RS15075 fc115009c78ec0fac7392531f842bef1 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 2.6E-60 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL539_RS15075 fc115009c78ec0fac7392531f842bef1 242 Gene3D G3DSA:3.60.140.10 1 242 6.8E-90 T 29-03-2018 AL539_RS18550 1a0dd5ff3ddc5472f492e7905e4b6198 479 SUPERFAMILY SSF51905 154 298 3.66E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18550 1a0dd5ff3ddc5472f492e7905e4b6198 479 SUPERFAMILY SSF51905 9 52 3.66E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18550 1a0dd5ff3ddc5472f492e7905e4b6198 479 SUPERFAMILY SSF51735 11 123 7.87E-5 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS18550 1a0dd5ff3ddc5472f492e7905e4b6198 479 Gene3D G3DSA:3.50.50.60 6 435 8.7E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18550 1a0dd5ff3ddc5472f492e7905e4b6198 479 Pfam PF01266 FAD dependent oxidoreductase 12 396 4.1E-9 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 397 5.5E-91 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 SUPERFAMILY SSF51182 9 395 1.21E-102 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 1.7E-67 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 Pfam PF01238 Phosphomannose isomerase type I 12 369 4.5E-85 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 PIRSF PIRSF001480 8 405 1.7E-99 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 271 296 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 Gene3D G3DSA:2.60.120.10 7 311 1.2E-78 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS18225 02ef424c741c28ed295d8240593fd1b2 405 Gene3D G3DSA:2.60.120.10 312 405 3.9E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS01690 1c4f147efe18c2ffdeaf5e7a5292eb50 212 Gene3D G3DSA:3.40.50.620 13 151 9.4E-29 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS01690 1c4f147efe18c2ffdeaf5e7a5292eb50 212 Pfam PF02698 DUF218 domain 33 145 1.8E-21 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AL539_RS14120 5496e66952abc02914ad155b2e3c87b5 1246 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 207 390 9.1E-9 T 29-03-2018 IPR000477 Reverse transcriptase domain AL539_RS14120 5496e66952abc02914ad155b2e3c87b5 1246 Gene3D G3DSA:3.60.110.10 954 1238 4.5E-10 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS14120 5496e66952abc02914ad155b2e3c87b5 1246 Gene3D G3DSA:3.30.70.270 61 401 1.3E-13 T 29-03-2018 AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 3.9E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 SUPERFAMILY SSF54909 75 149 3.89E-12 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 Gene3D G3DSA:3.30.70.920 63 149 4.2E-13 T 29-03-2018 AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.6E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.6E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.6E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 SUPERFAMILY SSF46785 10 67 7.52E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 1.8E-12 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 Gene3D G3DSA:1.10.10.10 10 61 2.1E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19965 233c5c5485baca775017bfc79e2c2bbf 150 SMART SM00344 10 116 6.9E-26 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.5E-141 T 29-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 SUPERFAMILY SSF47323 316 459 3.14E-40 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 Gene3D G3DSA:3.40.50.620 1 305 3.2E-95 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.254 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 SMART SM00840 341 402 1.2E-27 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 Pfam PF09190 DALR domain 341 402 1.1E-24 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.0E-191 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 SUPERFAMILY SSF52374 1 313 1.05E-103 T 29-03-2018 AL539_RS01680 3940f63e6ac45bf89c854befea5375df 460 Gene3D G3DSA:1.20.120.640 306 392 4.9E-21 T 29-03-2018 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 SUPERFAMILY SSF53850 96 302 8.51E-35 T 29-03-2018 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 Gene3D G3DSA:1.10.10.10 8 94 2.5E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 Gene3D G3DSA:3.40.190.10 268 308 1.5E-5 T 29-03-2018 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 Gene3D G3DSA:3.40.190.10 191 267 8.3E-7 T 29-03-2018 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 SUPERFAMILY SSF46785 10 88 7.56E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 Gene3D G3DSA:3.40.190.10 104 190 2.4E-13 T 29-03-2018 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 1.5E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19265 4f88e9a2eb7a617c8d051a7cf99c8535 309 Pfam PF03466 LysR substrate binding domain 103 303 7.5E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS07580 b297adc49bf1dc420da05c9c51c50cfd 208 Gene3D G3DSA:3.40.50.2020 1 206 1.5E-59 T 29-03-2018 AL539_RS07580 b297adc49bf1dc420da05c9c51c50cfd 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.9E-65 T 29-03-2018 AL539_RS07580 b297adc49bf1dc420da05c9c51c50cfd 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 5.5E-92 T 29-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL539_RS07580 b297adc49bf1dc420da05c9c51c50cfd 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.573 T 29-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL539_RS07580 b297adc49bf1dc420da05c9c51c50cfd 208 SUPERFAMILY SSF53271 3 206 2.23E-67 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 5.6E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 5.6E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 5.6E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 1.1E-33 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 Gene3D G3DSA:3.40.930.10 144 278 3.2E-8 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 Gene3D G3DSA:3.40.930.10 3 142 2.3E-31 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 SUPERFAMILY SSF55804 4 140 1.7E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 SUPERFAMILY SSF55594 291 376 8.24E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 Gene3D G3DSA:3.30.1340.10 284 371 2.0E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 SUPERFAMILY SSF55804 149 276 2.62E-18 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 291 370 1.5E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS18835 7edd32c0df4d51b609311579a2b724b6 377 Pfam PF00381 PTS HPr component phosphorylation site 291 370 4.3E-25 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS18330 7b5cc92ebb314c351614afbeccd6e684 461 Pfam PF01554 MatE 249 411 1.6E-15 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS18330 7b5cc92ebb314c351614afbeccd6e684 461 Pfam PF01554 MatE 22 182 4.8E-35 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS18330 7b5cc92ebb314c351614afbeccd6e684 461 PIRSF PIRSF006603 2 461 1.8E-67 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS18330 7b5cc92ebb314c351614afbeccd6e684 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 3.9E-53 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS05605 2d8f0ea16d02c8d7deb6ef6c71d4d4b4 199 Gene3D G3DSA:3.90.79.10 16 198 7.8E-41 T 29-03-2018 AL539_RS05605 2d8f0ea16d02c8d7deb6ef6c71d4d4b4 199 SUPERFAMILY SSF55811 11 192 3.52E-34 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS05605 2d8f0ea16d02c8d7deb6ef6c71d4d4b4 199 Pfam PF00293 NUDIX domain 45 160 1.9E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS16915 1cd2de99281767749004b6962658a92b 270 PIRSF PIRSF003092 1 270 2.9E-93 T 29-03-2018 IPR025501 ATP binding protein MinD AL539_RS16915 1cd2de99281767749004b6962658a92b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 1.4E-19 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL539_RS16915 1cd2de99281767749004b6962658a92b 270 Gene3D G3DSA:3.40.50.300 1 259 8.3E-54 T 29-03-2018 AL539_RS16915 1cd2de99281767749004b6962658a92b 270 SUPERFAMILY SSF52540 1 268 9.9E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16915 1cd2de99281767749004b6962658a92b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.1E-109 T 29-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AL539_RS09135 36582e587bdda187055ce20895a6f6ca 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 7.1E-43 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL539_RS09135 36582e587bdda187055ce20895a6f6ca 199 SUPERFAMILY SSF100950 5 196 2.65E-57 T 29-03-2018 AL539_RS09135 36582e587bdda187055ce20895a6f6ca 199 Gene3D G3DSA:3.40.50.10420 2 198 1.3E-56 T 29-03-2018 AL539_RS09135 36582e587bdda187055ce20895a6f6ca 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 5.4E-51 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL539_RS09135 36582e587bdda187055ce20895a6f6ca 199 PIRSF PIRSF006806 4 192 8.7E-36 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL539_RS03550 a02a69436b433a7819ff4c54f36c179f 209 Pfam PF11748 Protein of unknown function (DUF3306) 4 120 6.7E-27 T 29-03-2018 IPR021735 Protein of unknown function DUF3306 AL539_RS19120 ba434fc4ad10fa770b01d114d91fa7a3 294 SUPERFAMILY SSF103481 186 283 3.79E-12 T 29-03-2018 AL539_RS19120 ba434fc4ad10fa770b01d114d91fa7a3 294 SUPERFAMILY SSF103481 41 138 9.02E-18 T 29-03-2018 AL539_RS19120 ba434fc4ad10fa770b01d114d91fa7a3 294 Pfam PF00892 EamA-like transporter family 4 135 3.3E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS19120 ba434fc4ad10fa770b01d114d91fa7a3 294 Pfam PF00892 EamA-like transporter family 150 279 9.1E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS18365 8b260e8ca5f78d2119eb799332e95969 251 PIRSF PIRSF004846 2 251 1.4E-69 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AL539_RS18365 8b260e8ca5f78d2119eb799332e95969 251 Gene3D G3DSA:3.40.190.10 20 117 7.6E-18 T 29-03-2018 AL539_RS18365 8b260e8ca5f78d2119eb799332e95969 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 5.2E-62 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AL539_RS18365 8b260e8ca5f78d2119eb799332e95969 251 SUPERFAMILY SSF53850 25 249 2.81E-63 T 29-03-2018 AL539_RS18365 8b260e8ca5f78d2119eb799332e95969 251 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 2.2E-47 T 29-03-2018 AL539_RS18365 8b260e8ca5f78d2119eb799332e95969 251 Gene3D G3DSA:3.40.190.10 118 215 8.5E-30 T 29-03-2018 AL539_RS21185 fc912b0b51d32e5453ff338a9287747e 334 SUPERFAMILY SSF52540 1 333 3.19E-103 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21185 fc912b0b51d32e5453ff338a9287747e 334 PIRSF PIRSF026760 3 334 9.3E-108 T 29-03-2018 IPR011669 Uncharacterised conserved protein UCP026760 AL539_RS21185 fc912b0b51d32e5453ff338a9287747e 334 Gene3D G3DSA:3.40.50.300 128 320 4.4E-37 T 29-03-2018 AL539_RS21185 fc912b0b51d32e5453ff338a9287747e 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 47 124 1.8E-21 T 29-03-2018 IPR035402 Domain of unknown function DUF1611_N, Rossmann-like domain AL539_RS21185 fc912b0b51d32e5453ff338a9287747e 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 1.5E-74 T 29-03-2018 IPR035086 Domain of unknown function DUF1611, P-loop AL539_RS21185 fc912b0b51d32e5453ff338a9287747e 334 Gene3D G3DSA:3.40.50.720 2 126 1.3E-26 T 29-03-2018 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.806 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 9.1E-180 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 6.9E-9 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 SUPERFAMILY SSF53383 17 437 1.04E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 Gene3D G3DSA:3.90.1150.10 768 899 2.2E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 Gene3D G3DSA:3.40.640.10 513 767 6.9E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 Gene3D G3DSA:3.90.1150.10 341 441 1.7E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 SUPERFAMILY SSF53383 925 947 4.13E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 SUPERFAMILY SSF53383 453 882 4.13E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS18895 431bdb603b83dfafcd11cd7b7209a7e8 954 Gene3D G3DSA:3.40.640.10 95 340 2.9E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS24240 53e2db44d7686b073343c3653012d086 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS24240 53e2db44d7686b073343c3653012d086 478 Gene3D G3DSA:3.40.309.10 265 454 3.7E-61 T 29-03-2018 AL539_RS24240 53e2db44d7686b073343c3653012d086 478 SUPERFAMILY SSF53720 2 472 3.53E-141 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS24240 53e2db44d7686b073343c3653012d086 478 Gene3D G3DSA:3.40.605.10 1 264 1.1E-76 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS24240 53e2db44d7686b073343c3653012d086 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS24240 53e2db44d7686b073343c3653012d086 478 Pfam PF00171 Aldehyde dehydrogenase family 12 468 7.0E-148 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 Gene3D G3DSA:3.90.1150.10 305 396 1.4E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 Pfam PF00155 Aminotransferase class I and II 30 392 2.3E-65 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.6E-28 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.6E-28 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.6E-28 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.6E-28 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 Gene3D G3DSA:3.40.640.10 89 304 7.1E-26 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 SUPERFAMILY SSF53383 1 396 1.47E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS18340 bdd22b31de3fb481e2dd878e6c23dcf2 398 Gene3D G3DSA:3.90.1150.10 3 88 2.9E-11 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 SUPERFAMILY SSF46689 227 278 7.17E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 SUPERFAMILY SSF51215 27 162 8.63E-19 T 29-03-2018 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 SUPERFAMILY SSF46689 174 225 2.29E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 SMART SM00342 191 274 1.4E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 Pfam PF12833 Helix-turn-helix domain 198 275 3.6E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 Gene3D G3DSA:1.10.10.60 171 230 1.9E-11 T 29-03-2018 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 Gene3D G3DSA:1.10.10.60 231 283 2.5E-11 T 29-03-2018 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 Pfam PF02311 AraC-like ligand binding domain 33 115 9.5E-7 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL539_RS18335 411470d00b103ef996e38c7f62995674 285 Gene3D G3DSA:2.60.120.10 45 121 2.0E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS16700 f62af31f411f388d55e4438652983d3d 378 PIRSF PIRSF038994 1 378 6.7E-122 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL539_RS16700 f62af31f411f388d55e4438652983d3d 378 Pfam PF01979 Amidohydrolase family 51 374 5.3E-35 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL539_RS16700 f62af31f411f388d55e4438652983d3d 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 1.2E-155 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL539_RS16700 f62af31f411f388d55e4438652983d3d 378 SUPERFAMILY SSF51338 1 53 1.54E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS16700 f62af31f411f388d55e4438652983d3d 378 Gene3D G3DSA:3.20.20.140 68 347 2.5E-95 T 29-03-2018 AL539_RS16700 f62af31f411f388d55e4438652983d3d 378 Gene3D G3DSA:2.30.40.10 2 67 6.8E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS16700 f62af31f411f388d55e4438652983d3d 378 SUPERFAMILY SSF51556 54 347 6.81E-102 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS08945 1d45b7a01a40f8b0475fe58c82789289 208 SUPERFAMILY SSF53335 14 204 2.17E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS08945 1d45b7a01a40f8b0475fe58c82789289 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL539_RS08945 1d45b7a01a40f8b0475fe58c82789289 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.3E-82 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL539_RS08945 1d45b7a01a40f8b0475fe58c82789289 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.968 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL539_RS08945 1d45b7a01a40f8b0475fe58c82789289 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 4.6E-71 T 29-03-2018 AL539_RS08945 1d45b7a01a40f8b0475fe58c82789289 208 Gene3D G3DSA:3.40.50.150 13 206 1.8E-36 T 29-03-2018 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 Gene3D G3DSA:3.90.1170.30 2 46 5.2E-12 T 29-03-2018 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 Gene3D G3DSA:4.10.320.10 119 169 1.0E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 SUPERFAMILY SSF51230 3 93 5.1E-25 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS25890 506951d563604caddfdeb10fc057a167 384 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 Gene3D G3DSA:2.40.50.100 47 114 1.5E-7 T 29-03-2018 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 382 8.0E-55 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 Gene3D G3DSA:3.30.559.10 170 383 6.9E-46 T 29-03-2018 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 SUPERFAMILY SSF52777 167 382 2.36E-54 T 29-03-2018 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 SUPERFAMILY SSF47005 124 166 4.45E-9 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 Pfam PF02817 e3 binding domain 131 163 1.8E-9 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS25890 506951d563604caddfdeb10fc057a167 384 Pfam PF00364 Biotin-requiring enzyme 5 77 5.6E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS15055 96cd9bfb9907cb1a88f5502fe1c02136 108 SUPERFAMILY SSF69754 1 102 6.28E-29 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS15055 96cd9bfb9907cb1a88f5502fe1c02136 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.7E-30 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS15055 96cd9bfb9907cb1a88f5502fe1c02136 108 Gene3D G3DSA:3.30.160.100 1 100 2.4E-27 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS15055 96cd9bfb9907cb1a88f5502fe1c02136 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 7.3E-23 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 Gene3D G3DSA:2.60.40.420 114 281 1.8E-47 T 29-03-2018 IPR008972 Cupredoxin AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 PIRSF PIRSF000292 1 292 2.6E-127 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 SUPERFAMILY SSF81464 29 116 1.14E-23 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 SUPERFAMILY SSF49503 119 280 1.34E-49 T 29-03-2018 IPR008972 Cupredoxin AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 Gene3D G3DSA:1.10.287.90 28 113 7.2E-21 T 29-03-2018 AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 221 6.6E-8 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 Pfam PF06481 COX Aromatic Rich Motif 239 283 5.5E-13 T 29-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AL539_RS25755 318a9da85a1f3a286be903e9ac86ba13 293 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 239 1.0E-113 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 9.0E-44 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 1.6E-11 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 Gene3D G3DSA:2.60.15.10 2 91 6.6E-28 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.2E-28 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 SUPERFAMILY SSF46604 89 138 2.62E-14 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.814 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 Gene3D G3DSA:1.20.5.440 92 132 3.9E-12 T 29-03-2018 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 SUPERFAMILY SSF51344 5 87 2.62E-24 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12140 eb15769092a576367b4dd7c8467926b4 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-40 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 2.3E-67 T 29-03-2018 AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.8E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 SUPERFAMILY SSF51735 5 244 1.95E-87 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 1.8E-100 T 29-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.7E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.7E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 Gene3D G3DSA:3.40.50.720 1 49 2.2E-11 T 29-03-2018 AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 Gene3D G3DSA:3.40.50.720 50 245 3.9E-66 T 29-03-2018 AL539_RS06425 848c535808c8f3d89d84712e53f6e8af 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 1.7E-4 T 29-03-2018 AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.0E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.0E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.0E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 SUPERFAMILY SSF46785 2 59 2.64E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.9E-18 T 29-03-2018 AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 SMART SM00344 3 112 1.5E-36 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 SUPERFAMILY SSF54909 66 147 1.18E-17 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 Gene3D G3DSA:1.10.10.10 3 52 2.5E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 8.7E-19 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS20970 a6720f71840670b8bbb1552277f33a0b 159 Gene3D G3DSA:3.30.70.920 53 150 6.1E-21 T 29-03-2018 AL539_RS07970 edd742a58488022f29a468aadf6cabb2 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 1.4E-204 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL539_RS07970 edd742a58488022f29a468aadf6cabb2 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.4E-113 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL539_RS07970 edd742a58488022f29a468aadf6cabb2 446 Gene3D G3DSA:2.40.50.100 12 88 5.0E-4 T 29-03-2018 AL539_RS07970 edd742a58488022f29a468aadf6cabb2 446 Pfam PF11973 NQRA C-terminal domain 261 310 8.4E-22 T 29-03-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AL539_RS07970 edd742a58488022f29a468aadf6cabb2 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.351 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL539_RS15800 9ae3a7be2973e763874f04fd5a86adf8 182 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL539_RS15800 9ae3a7be2973e763874f04fd5a86adf8 182 SUPERFAMILY SSF53927 6 159 4.52E-56 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS15800 9ae3a7be2973e763874f04fd5a86adf8 182 Gene3D G3DSA:3.40.140.10 3 166 1.5E-51 T 29-03-2018 AL539_RS15800 9ae3a7be2973e763874f04fd5a86adf8 182 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.282 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL539_RS15800 9ae3a7be2973e763874f04fd5a86adf8 182 Pfam PF14437 MafB19-like deaminase 11 155 1.2E-32 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL539_RS01305 3dbce3545e7480ccb24c24c5cb91019c 542 SMART SM00283 280 541 1.2E-65 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS01305 3dbce3545e7480ccb24c24c5cb91019c 542 SUPERFAMILY SSF58104 241 542 1.23E-71 T 29-03-2018 AL539_RS01305 3dbce3545e7480ccb24c24c5cb91019c 542 Gene3D G3DSA:1.10.287.950 219 302 3.7E-4 T 29-03-2018 AL539_RS01305 3dbce3545e7480ccb24c24c5cb91019c 542 Gene3D G3DSA:1.10.287.950 503 541 0.0087 T 29-03-2018 AL539_RS01305 3dbce3545e7480ccb24c24c5cb91019c 542 Gene3D G3DSA:1.10.287.950 303 502 2.8E-52 T 29-03-2018 AL539_RS01305 3dbce3545e7480ccb24c24c5cb91019c 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 182 6.2E-20 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL539_RS01305 3dbce3545e7480ccb24c24c5cb91019c 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 507 3.6E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 Gene3D G3DSA:3.30.300.30 461 597 1.8E-16 T 29-03-2018 AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 Pfam PF00501 AMP-binding enzyme 14 466 7.0E-100 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 SUPERFAMILY SSF56801 7 285 4.97E-114 T 29-03-2018 AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 SUPERFAMILY SSF56801 336 596 4.97E-114 T 29-03-2018 AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 Gene3D G3DSA:2.30.38.10 389 460 6.4E-19 T 29-03-2018 AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 Gene3D G3DSA:3.40.50.980 7 187 2.6E-35 T 29-03-2018 AL539_RS14040 06f2b0c1787a0925950892fa629c5597 602 Gene3D G3DSA:3.40.50.980 188 388 4.2E-43 T 29-03-2018 AL539_RS13630 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13630 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13630 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13630 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 29-03-2018 AL539_RS13630 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13630 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS25270 eba69da7da5b455ecea6ee21470c9601 678 ProSitePatterns PS00397 Site-specific recombinases active site. 10 18 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL539_RS25270 eba69da7da5b455ecea6ee21470c9601 678 Gene3D G3DSA:3.40.50.1390 1 176 1.3E-24 T 29-03-2018 AL539_RS25270 eba69da7da5b455ecea6ee21470c9601 678 SMART SM00857 7 166 5.4E-13 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS25270 eba69da7da5b455ecea6ee21470c9601 678 Pfam PF07508 Recombinase 193 284 5.1E-6 T 29-03-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 AL539_RS25270 eba69da7da5b455ecea6ee21470c9601 678 SUPERFAMILY SSF53041 6 164 1.96E-12 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS25270 eba69da7da5b455ecea6ee21470c9601 678 Pfam PF00239 Resolvase, N terminal domain 8 156 1.5E-14 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS24585 61c33ffffcd38b20689bcdadb22035d6 434 PIRSF PIRSF006603 4 433 2.3E-50 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS24585 61c33ffffcd38b20689bcdadb22035d6 434 Pfam PF01554 MatE 244 393 3.4E-15 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS24585 61c33ffffcd38b20689bcdadb22035d6 434 Pfam PF01554 MatE 14 174 2.9E-17 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS24585 61c33ffffcd38b20689bcdadb22035d6 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 408 9.0E-67 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 8.1E-28 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 SUPERFAMILY SSF53901 215 406 1.17E-59 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 Gene3D G3DSA:3.40.47.10 261 407 6.1E-36 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 SUPERFAMILY SSF53901 3 252 3.29E-55 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 SMART SM00825 Beta-ketoacyl synthase 5 377 3.2E-11 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 3.1E-40 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_RS16955 8e9558b6e16b65924b80664f38ba5376 407 Gene3D G3DSA:3.40.47.10 1 259 8.0E-54 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS00010 c611b49810680eff026db6f3a5f014ba 234 SUPERFAMILY SSF141868 3 212 5.49E-29 T 29-03-2018 IPR001633 EAL domain AL539_RS00010 c611b49810680eff026db6f3a5f014ba 234 Gene3D G3DSA:3.20.20.450 2 220 1.3E-24 T 29-03-2018 IPR001633 EAL domain AL539_RS00010 c611b49810680eff026db6f3a5f014ba 234 SMART SM00052 1 213 6.2E-7 T 29-03-2018 IPR001633 EAL domain AL539_RS00010 c611b49810680eff026db6f3a5f014ba 234 Pfam PF00563 EAL domain 2 208 1.3E-21 T 29-03-2018 IPR001633 EAL domain AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 SUPERFAMILY SSF52540 785 999 2.24E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 SUPERFAMILY SSF52540 1 184 2.24E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 SUPERFAMILY SSF52540 222 258 2.24E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 904 971 3.2E-12 T 29-03-2018 AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 Gene3D G3DSA:1.20.1170.10 619 728 0.13 T 29-03-2018 AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 Gene3D G3DSA:1.20.5.50 523 618 0.0037 T 29-03-2018 AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 Gene3D G3DSA:3.40.50.300 729 1015 5.5E-25 T 29-03-2018 AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 Gene3D G3DSA:3.40.50.300 1 194 2.8E-25 T 29-03-2018 AL539_RS17965 bdb92dd140acc75e96a02989e6dbb381 1018 Pfam PF13476 AAA domain 5 259 8.3E-27 T 29-03-2018 AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 Pfam PF03466 LysR substrate binding domain 89 292 6.3E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 Gene3D G3DSA:3.40.190.10 176 264 7.8E-26 T 29-03-2018 AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 SUPERFAMILY SSF46785 3 112 6.25E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 Gene3D G3DSA:1.10.10.10 3 84 9.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 Gene3D G3DSA:3.40.190.10 88 175 3.0E-13 T 29-03-2018 AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18025 32a6737aee6a25e2b9961f6ab3ec324b 300 SUPERFAMILY SSF53850 89 295 1.23E-43 T 29-03-2018 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 SMART SM01274 78 258 6.6E-108 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 5.6E-78 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PIRSF PIRSF000106 2 560 1.9E-225 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 SMART SM00919 268 528 2.8E-133 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 Gene3D G3DSA:3.40.50.720 266 562 3.0E-107 T 29-03-2018 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 SUPERFAMILY SSF53223 4 267 7.91E-110 T 29-03-2018 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 144 173 2.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 180 202 2.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 84 108 2.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 405 421 2.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 264 280 2.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 295 311 2.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 239 257 2.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 SUPERFAMILY SSF51735 268 559 2.25E-95 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 1.4E-103 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.039 T 29-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 Gene3D G3DSA:3.40.50.10380 12 265 1.4E-114 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL539_RS02160 4e6cd8bc469bbc8732df23b0a0882016 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL539_RS14005 03704227f3ebfb9464d195365147c940 363 Gene3D G3DSA:3.40.718.10 1 363 2.4E-133 T 29-03-2018 AL539_RS14005 03704227f3ebfb9464d195365147c940 363 SUPERFAMILY SSF53659 4 361 3.46E-123 T 29-03-2018 AL539_RS14005 03704227f3ebfb9464d195365147c940 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 3.7E-137 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL539_RS14005 03704227f3ebfb9464d195365147c940 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL539_RS14005 03704227f3ebfb9464d195365147c940 363 SMART SM01329 7 356 2.6E-203 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL539_RS14005 03704227f3ebfb9464d195365147c940 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 1.8E-165 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL539_RS14005 03704227f3ebfb9464d195365147c940 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.42 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 166 361 44.022 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 SUPERFAMILY SSF142695 167 337 1.44E-63 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 Pfam PF00925 GTP cyclohydrolase II 173 335 3.4E-64 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 SUPERFAMILY SSF143990 19 160 9.55E-53 T 29-03-2018 AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 20 159 2.6E-35 T 29-03-2018 IPR012816 NADAR AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 Pfam PF08719 Domain of unknown function (DUF1768) 22 160 7.7E-37 T 29-03-2018 IPR012816 NADAR AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 PIRSF PIRSF001259 1 368 1.9E-111 T 29-03-2018 AL539_RS22640 16f5f603665d1fd6e37cf4559a245074 368 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 172 358 1.8E-80 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS04165 a1449c34e88f3c96d4da5e0600b427e8 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 248 3.5E-54 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS04165 a1449c34e88f3c96d4da5e0600b427e8 253 Gene3D G3DSA:3.40.190.10 138 253 6.4E-16 T 29-03-2018 AL539_RS04165 a1449c34e88f3c96d4da5e0600b427e8 253 SMART SM00079 23 249 3.7E-4 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL539_RS04165 a1449c34e88f3c96d4da5e0600b427e8 253 SUPERFAMILY SSF53850 4 251 3.7E-62 T 29-03-2018 AL539_RS04165 a1449c34e88f3c96d4da5e0600b427e8 253 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL539_RS04165 a1449c34e88f3c96d4da5e0600b427e8 253 SMART SM00062 23 250 3.2E-57 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS04165 a1449c34e88f3c96d4da5e0600b427e8 253 Gene3D G3DSA:3.40.190.10 12 137 2.1E-35 T 29-03-2018 AL539_RS10775 f08f7c1115b000ba2e59a0ec1668ef2f 144 Gene3D G3DSA:3.40.250.10 20 144 1.5E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS10775 f08f7c1115b000ba2e59a0ec1668ef2f 144 SUPERFAMILY SSF52821 15 143 9.3E-31 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS10775 f08f7c1115b000ba2e59a0ec1668ef2f 144 Pfam PF00581 Rhodanese-like domain 44 135 4.5E-17 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS10775 f08f7c1115b000ba2e59a0ec1668ef2f 144 SMART SM00450 40 138 6.7E-21 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 Pfam PF02195 ParB-like nuclease domain 29 116 1.3E-13 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 Gene3D G3DSA:3.90.1530.10 14 117 8.8E-22 T 29-03-2018 AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 SUPERFAMILY SSF109709 113 219 3.92E-21 T 29-03-2018 AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 35 195 6.5E-30 T 29-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 SUPERFAMILY SSF110849 27 156 3.49E-16 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 Gene3D G3DSA:1.10.10.730 118 164 3.9E-11 T 29-03-2018 AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 Pfam PF08535 KorB domain 137 223 1.5E-29 T 29-03-2018 IPR013741 Repressor KorB domain AL539_RS00295 8ddd52587285bab91f7e9da1cb310c39 396 SMART SM00470 27 117 4.1E-15 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS11460 788c0450eb9fcdc4a67a0e07b2305141 199 PIRSF PIRSF004553 18 198 1.5E-56 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL539_RS11460 788c0450eb9fcdc4a67a0e07b2305141 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 6.7E-63 T 29-03-2018 AL539_RS11460 788c0450eb9fcdc4a67a0e07b2305141 199 Gene3D G3DSA:3.40.50.150 5 199 7.7E-41 T 29-03-2018 AL539_RS11460 788c0450eb9fcdc4a67a0e07b2305141 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 8.1E-60 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL539_RS11460 788c0450eb9fcdc4a67a0e07b2305141 199 SUPERFAMILY SSF53335 19 196 4.08E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.0E-15 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.1E-48 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 SMART SM00382 113 266 2.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 SUPERFAMILY SSF52540 63 404 5.86E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 Gene3D G3DSA:1.10.8.60 319 411 7.7E-33 T 29-03-2018 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 SMART SM00994 13 52 1.0E-24 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.321 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 29-03-2018 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 1.5E-209 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 Gene3D G3DSA:3.40.50.300 57 317 1.5E-68 T 29-03-2018 AL539_RS17135 58992a5db86d9b80f77ee02f50333449 426 SMART SM01086 319 414 4.5E-34 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS08750 a88fe7b14a3f76c53da99291d5393862 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL539_RS08750 a88fe7b14a3f76c53da99291d5393862 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL539_RS08750 a88fe7b14a3f76c53da99291d5393862 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL539_RS08750 a88fe7b14a3f76c53da99291d5393862 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL539_RS08750 a88fe7b14a3f76c53da99291d5393862 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 1.6E-32 T 29-03-2018 IPR010627 Peptidase A24A, N-terminal AL539_RS08750 a88fe7b14a3f76c53da99291d5393862 289 Pfam PF01478 Type IV leader peptidase family 135 244 4.6E-28 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL539_RS12235 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS12235 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS12235 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS12235 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS12235 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 29-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS03130 39af09a2015b0860d3e6bf24e67b761f 315 Pfam PF03466 LysR substrate binding domain 101 308 2.1E-17 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS03130 39af09a2015b0860d3e6bf24e67b761f 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 2.8E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS03130 39af09a2015b0860d3e6bf24e67b761f 315 Gene3D G3DSA:3.40.190.10 106 193 4.2E-8 T 29-03-2018 AL539_RS03130 39af09a2015b0860d3e6bf24e67b761f 315 Gene3D G3DSA:3.40.190.10 194 278 1.9E-10 T 29-03-2018 AL539_RS03130 39af09a2015b0860d3e6bf24e67b761f 315 SUPERFAMILY SSF46785 9 91 6.19E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS03130 39af09a2015b0860d3e6bf24e67b761f 315 SUPERFAMILY SSF53850 95 305 7.76E-32 T 29-03-2018 AL539_RS03130 39af09a2015b0860d3e6bf24e67b761f 315 Gene3D G3DSA:1.10.10.10 7 92 1.2E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05395 40694c3ce5c64373d3f6ba2127c23ebd 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.6E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS13335 99898d0451f94a76ce248f821e3eaaa5 154 SUPERFAMILY SSF52374 1 125 3.75E-33 T 29-03-2018 AL539_RS13335 99898d0451f94a76ce248f821e3eaaa5 154 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 4.3E-21 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS13335 99898d0451f94a76ce248f821e3eaaa5 154 Pfam PF01467 Cytidylyltransferase-like 5 124 9.0E-23 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS13335 99898d0451f94a76ce248f821e3eaaa5 154 Gene3D G3DSA:3.40.50.620 1 133 8.1E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS17765 3d40356f6128a5769274f196615b0761 248 Pfam PF01709 Transcriptional regulator 5 236 1.7E-95 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS17765 3d40356f6128a5769274f196615b0761 248 Gene3D G3DSA:3.30.70.980 179 248 3.6E-11 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS17765 3d40356f6128a5769274f196615b0761 248 Gene3D G3DSA:3.30.70.980 83 177 2.3E-31 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS17765 3d40356f6128a5769274f196615b0761 248 Gene3D G3DSA:1.10.10.200 1 78 1.4E-31 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AL539_RS17765 3d40356f6128a5769274f196615b0761 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 4.3E-104 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS17765 3d40356f6128a5769274f196615b0761 248 SUPERFAMILY SSF75625 3 245 6.15E-97 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS17765 3d40356f6128a5769274f196615b0761 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.098 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 SUPERFAMILY SSF103190 85 183 4.71E-6 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 Gene3D G3DSA:3.30.450.20 83 167 1.9E-8 T 29-03-2018 AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 Gene3D G3DSA:3.30.70.270 360 525 2.1E-48 T 29-03-2018 AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 SUPERFAMILY SSF55073 372 520 2.82E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 SMART SM00267 356 521 4.3E-52 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 SUPERFAMILY SSF103190 185 267 5.49E-13 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 Pfam PF02743 Cache domain 49 268 7.3E-23 T 29-03-2018 IPR033479 Double Cache domain 1 AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 Gene3D G3DSA:3.30.450.20 168 282 6.6E-20 T 29-03-2018 AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 364 520 6.7E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03070 87e2d2a70170c784a8342ddc269337d6 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 368 517 9.2E-42 T 29-03-2018 IPR000160 GGDEF domain AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 Gene3D G3DSA:3.40.980.10 3 170 1.9E-34 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.6E-85 T 29-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 9.0E-38 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 5.9E-35 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 SUPERFAMILY SSF53218 7 168 1.7E-47 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 PIRSF PIRSF006443 1 166 8.9E-67 T 29-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AL539_RS06655 101fda201ba80323a797d7e3dcab7f22 170 SMART SM00852 14 158 2.4E-28 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS08590 b85e69e8b1870908f2487c9e33cf9f9d 337 SUPERFAMILY SSF53850 24 332 1.63E-76 T 29-03-2018 AL539_RS08590 b85e69e8b1870908f2487c9e33cf9f9d 337 Gene3D G3DSA:3.40.190.10 165 304 5.3E-21 T 29-03-2018 AL539_RS08590 b85e69e8b1870908f2487c9e33cf9f9d 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 1.5E-20 T 29-03-2018 AL539_RS08590 b85e69e8b1870908f2487c9e33cf9f9d 337 Gene3D G3DSA:3.40.190.10 22 164 8.7E-20 T 29-03-2018 AL539_RS08590 b85e69e8b1870908f2487c9e33cf9f9d 337 PIRSF PIRSF002825 1 337 1.7E-102 T 29-03-2018 IPR026045 Ferric binding protein AL539_RS21170 9ae0c69ce707da60bc79072b7221ef35 402 Pfam PF07690 Major Facilitator Superfamily 11 269 2.9E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS21170 9ae0c69ce707da60bc79072b7221ef35 402 SUPERFAMILY SSF103473 9 388 3.27E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS21170 9ae0c69ce707da60bc79072b7221ef35 402 Gene3D G3DSA:1.20.1250.20 5 188 1.9E-12 T 29-03-2018 AL539_RS21170 9ae0c69ce707da60bc79072b7221ef35 402 Gene3D G3DSA:1.20.1250.20 196 393 1.3E-15 T 29-03-2018 AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 3 102 3.3E-36 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 29-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AL539_RS13520 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 Gene3D G3DSA:3.20.190.10 1 130 1.8E-36 T 29-03-2018 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.863 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 SMART SM01232 129 221 2.2E-47 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 5.8E-8 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 Gene3D G3DSA:1.10.8.50 131 269 6.7E-50 T 29-03-2018 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.4E-32 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 SUPERFAMILY SSF81624 2 138 9.81E-42 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 5.9E-96 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 SUPERFAMILY SSF57716 217 269 3.71E-16 T 29-03-2018 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 SUPERFAMILY SSF46946 130 221 7.72E-31 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.2E-28 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AL539_RS13175 3539f6ed0decc25cf0e54e932406a07f 269 SMART SM00898 2 115 6.8E-55 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL539_RS17360 89bcc12e8cf0b7f4539f8abc24a5e71b 386 Gene3D G3DSA:1.10.10.680 166 239 3.4E-36 T 29-03-2018 AL539_RS17360 89bcc12e8cf0b7f4539f8abc24a5e71b 386 Gene3D G3DSA:3.40.1350.10 240 383 8.2E-38 T 29-03-2018 AL539_RS17360 89bcc12e8cf0b7f4539f8abc24a5e71b 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 378 1.4E-161 T 29-03-2018 IPR015093 Protein of unknown function DUF1887 AL539_RS17360 89bcc12e8cf0b7f4539f8abc24a5e71b 386 SUPERFAMILY SSF52980 1 382 3.58E-117 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS17360 89bcc12e8cf0b7f4539f8abc24a5e71b 386 Gene3D G3DSA:3.40.50.10770 1 140 9.2E-19 T 29-03-2018 AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 1.0E-16 T 29-03-2018 AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 SUPERFAMILY SSF46785 2 91 6.25E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 Gene3D G3DSA:1.10.10.10 4 55 9.9E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 SUPERFAMILY SSF54909 63 152 1.54E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 Gene3D G3DSA:3.30.70.920 56 149 6.6E-23 T 29-03-2018 AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 1.7E-19 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 SMART SM00344 3 112 7.6E-44 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.4E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.4E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS17300 d32a29ecace9f3b86a9671bc9092ee0e 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.4E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS24370 72869ec100dc81d9ec124fcccd886c98 401 Pfam PF10082 Putative beta-barrel porin 2 34 396 5.3E-28 T 29-03-2018 IPR018759 Putative beta-barrel porin 2 AL539_RS24370 72869ec100dc81d9ec124fcccd886c98 401 SUPERFAMILY SSF56925 280 399 3.66E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS24370 72869ec100dc81d9ec124fcccd886c98 401 Gene3D G3DSA:2.40.160.10 39 290 3.9E-5 T 29-03-2018 AL539_RS24370 72869ec100dc81d9ec124fcccd886c98 401 Gene3D G3DSA:2.40.160.60 291 401 6.3E-10 T 29-03-2018 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 Gene3D G3DSA:1.10.8.10 201 243 8.8E-15 T 29-03-2018 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 Gene3D G3DSA:1.10.8.10 125 200 1.1E-30 T 29-03-2018 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 180 329 1.1E-42 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.6E-222 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 SMART SM00382 49 332 5.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.1 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 Gene3D G3DSA:3.40.50.300 7 124 1.3E-5 T 29-03-2018 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 Gene3D G3DSA:1.10.8.60 335 431 6.7E-29 T 29-03-2018 AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 SUPERFAMILY SSF52540 3 441 1.65E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 SMART SM01086 335 429 2.0E-19 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS13485 1e6737d8939f05de8ca4b04bc84e8996 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 7.8E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 SMART SM00052 403 635 2.2E-10 T 29-03-2018 IPR001633 EAL domain AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 7.9E-40 T 29-03-2018 IPR032244 LapD/MoxY, periplasmic domain AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 SMART SM00267 226 392 1.2E-12 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 386 3.1E-13 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 Pfam PF00563 EAL domain 411 635 4.6E-40 T 29-03-2018 IPR001633 EAL domain AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 Gene3D G3DSA:3.30.70.270 221 392 1.0E-20 T 29-03-2018 AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 Gene3D G3DSA:3.20.20.450 394 637 1.2E-41 T 29-03-2018 IPR001633 EAL domain AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 SUPERFAMILY SSF141868 411 636 4.84E-41 T 29-03-2018 IPR001633 EAL domain AL539_RS22760 1f444fb28aa534cde8497ceaabb750e8 637 SUPERFAMILY SSF55073 243 390 2.67E-17 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS17555 1d95fc5d35d0e23d38122faf7c8045fb 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 8.1E-88 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AL539_RS17555 1d95fc5d35d0e23d38122faf7c8045fb 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AL539_RS17555 1d95fc5d35d0e23d38122faf7c8045fb 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.4E-20 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS17555 1d95fc5d35d0e23d38122faf7c8045fb 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AL539_RS17555 1d95fc5d35d0e23d38122faf7c8045fb 268 Gene3D G3DSA:3.60.10.10 1 268 8.5E-49 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS17555 1d95fc5d35d0e23d38122faf7c8045fb 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.3E-101 T 29-03-2018 AL539_RS17555 1d95fc5d35d0e23d38122faf7c8045fb 268 SUPERFAMILY SSF56219 1 268 5.37E-87 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS16720 a2768401993f35200a13f91dfa263f7e 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.5E-46 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL539_RS16720 a2768401993f35200a13f91dfa263f7e 149 Gene3D G3DSA:1.10.10.10 4 88 1.1E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16720 a2768401993f35200a13f91dfa263f7e 149 SUPERFAMILY SSF46785 5 135 7.5E-44 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02985 ee95d673b5789a2d505463c2dbfabe45 521 SUPERFAMILY SSF53649 23 475 6.98E-121 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS02985 ee95d673b5789a2d505463c2dbfabe45 521 Gene3D G3DSA:3.30.1120.10 389 482 3.8E-13 T 29-03-2018 AL539_RS02985 ee95d673b5789a2d505463c2dbfabe45 521 Gene3D G3DSA:3.40.720.10 252 388 1.2E-33 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS02985 ee95d673b5789a2d505463c2dbfabe45 521 Gene3D G3DSA:3.40.720.10 23 251 4.9E-52 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS02985 ee95d673b5789a2d505463c2dbfabe45 521 Pfam PF00884 Sulfatase 27 353 2.6E-65 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS02985 ee95d673b5789a2d505463c2dbfabe45 521 Pfam PF14707 C-terminal region of aryl-sulfatase 392 487 5.9E-7 T 29-03-2018 AL539_RS16650 f1e1538c7e4df601dcda1325f475a3c9 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 2.0E-69 T 29-03-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL539_RS16650 f1e1538c7e4df601dcda1325f475a3c9 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 7.0E-84 T 29-03-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 SMART SM00388 262 327 2.7E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 326 8.9E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 SUPERFAMILY SSF103190 99 183 4.32E-12 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 SUPERFAMILY SSF47384 258 326 1.14E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 Gene3D G3DSA:3.30.565.10 333 480 2.1E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 SUPERFAMILY SSF55874 316 478 9.69E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 479 2.5E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 SMART SM00387 372 479 7.1E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 Gene3D G3DSA:1.10.287.130 246 323 3.4E-13 T 29-03-2018 AL539_RS23560 f5a6955ebf2798525e739689cd73a100 480 Gene3D G3DSA:3.30.450.20 34 183 1.4E-27 T 29-03-2018 AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 Gene3D G3DSA:1.10.3210.10 2 226 2.2E-61 T 29-03-2018 AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.44 T 29-03-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 1.5E-24 T 29-03-2018 IPR026875 Phosphohydrolase-associated domain AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 4.3E-126 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 Pfam PF01966 HD domain 62 146 4.4E-7 T 29-03-2018 IPR006674 HD domain AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 SUPERFAMILY SSF109604 19 167 1.13E-77 T 29-03-2018 AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 SUPERFAMILY SSF109604 232 437 1.13E-77 T 29-03-2018 AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 SMART SM00471 58 264 3.8E-7 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS17170 4fcf247b1336cee54bf38853a9055692 440 Gene3D G3DSA:1.10.3550.10 274 432 8.3E-20 T 29-03-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain AL539_RS08530 0c4a7cbcc53293f399ed595a43a5ea23 560 Gene3D G3DSA:3.90.76.10 45 187 8.6E-32 T 29-03-2018 AL539_RS08530 0c4a7cbcc53293f399ed595a43a5ea23 560 Gene3D G3DSA:3.10.105.10 287 517 1.3E-50 T 29-03-2018 AL539_RS08530 0c4a7cbcc53293f399ed595a43a5ea23 560 SUPERFAMILY SSF53850 42 544 7.24E-106 T 29-03-2018 AL539_RS08530 0c4a7cbcc53293f399ed595a43a5ea23 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 1.1E-74 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS08530 0c4a7cbcc53293f399ed595a43a5ea23 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL539_RS08530 0c4a7cbcc53293f399ed595a43a5ea23 560 Gene3D G3DSA:3.40.190.10 188 286 1.9E-8 T 29-03-2018 AL539_RS08530 0c4a7cbcc53293f399ed595a43a5ea23 560 PIRSF PIRSF002741 5 542 1.0E-65 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS19430 6e59aa997d1254a197387a86b3c621dc 226 Gene3D G3DSA:1.10.10.10 147 226 3.9E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19430 6e59aa997d1254a197387a86b3c621dc 226 Gene3D G3DSA:2.60.120.10 11 146 9.0E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS19430 6e59aa997d1254a197387a86b3c621dc 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 1.6E-11 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS19430 6e59aa997d1254a197387a86b3c621dc 226 SUPERFAMILY SSF51206 32 146 1.83E-19 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 SUPERFAMILY SSF55874 320 443 4.71E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 Gene3D G3DSA:3.30.565.10 312 448 2.1E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 Pfam PF07730 Histidine kinase 250 315 3.7E-14 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 Gene3D G3DSA:3.30.450.20 25 206 6.0E-50 T 29-03-2018 AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 PIRSF PIRSF037314 1 451 3.4E-188 T 29-03-2018 IPR017171 Signal transduction histidine kinase, MctS AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 SMART SM00387 353 447 2.8E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 2.0E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 Pfam PF17200 Single Cache domain 2 45 192 1.1E-38 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS05705 e2f2526d2361e23f6ee135fbdaa1890b 451 SMART SM01049 42 133 9.7E-27 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:2.30.130.40 1 116 7.7E-30 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:3.30.230.10 576 783 4.1E-70 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 SUPERFAMILY SSF54211 594 769 2.05E-59 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 PIRSF PIRSF001174 1 774 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 SUPERFAMILY SSF88697 10 200 1.91E-48 T 29-03-2018 IPR015947 PUA-like domain AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 6.0E-100 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 SMART SM00382 347 491 1.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.014 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 3.1E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:3.40.50.300 312 489 1.1E-28 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:1.10.4060.10 120 210 1.4E-28 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 4.3E-56 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 4.3E-56 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 4.3E-56 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 4.3E-56 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 4.3E-56 T 29-03-2018 AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 SMART SM00464 10 201 3.7E-77 T 29-03-2018 IPR003111 Lon, substrate-binding domain AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.5E-40 T 29-03-2018 IPR003111 Lon, substrate-binding domain AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 SUPERFAMILY SSF52540 312 586 1.93E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:1.10.8.60 490 575 4.4E-34 T 29-03-2018 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 SUPERFAMILY SSF103473 7 420 4.71E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 Gene3D G3DSA:1.20.1250.20 215 414 4.4E-12 T 29-03-2018 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 SMART SM00563 450 566 1.3E-30 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 Pfam PF07690 Major Facilitator Superfamily 40 380 6.0E-15 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 Gene3D G3DSA:3.40.1130.10 415 616 7.5E-40 T 29-03-2018 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 Pfam PF01553 Acyltransferase 435 563 5.8E-25 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 SUPERFAMILY SSF69593 382 614 1.57E-31 T 29-03-2018 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 Gene3D G3DSA:1.20.1250.20 2 201 2.7E-5 T 29-03-2018 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 PRINTS PR01988 Putative bacilysin exporter bacE signature 142 163 5.7E-5 T 29-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 PRINTS PR01988 Putative bacilysin exporter bacE signature 101 119 5.7E-5 T 29-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AL539_RS20650 e15efc36ef9007f047b2890d54db3b72 617 PRINTS PR01988 Putative bacilysin exporter bacE signature 377 400 5.7E-5 T 29-03-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AL539_RS25330 9e601c5c9e3fd385849b4926f5c132f9 198 Pfam PF00589 Phage integrase family 36 183 1.2E-16 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS25330 9e601c5c9e3fd385849b4926f5c132f9 198 SUPERFAMILY SSF56349 11 194 3.24E-36 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS25330 9e601c5c9e3fd385849b4926f5c132f9 198 Gene3D G3DSA:1.10.443.10 11 188 5.3E-25 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS15460 ff0f50b732f01102eb62b5f30c0abb12 511 Pfam PF00795 Carbon-nitrogen hydrolase 225 484 1.6E-34 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS15460 ff0f50b732f01102eb62b5f30c0abb12 511 SUPERFAMILY SSF56317 222 491 4.45E-60 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS15460 ff0f50b732f01102eb62b5f30c0abb12 511 Gene3D G3DSA:3.40.630.30 1 222 2.7E-30 T 29-03-2018 AL539_RS15460 ff0f50b732f01102eb62b5f30c0abb12 511 Gene3D G3DSA:3.60.110.10 223 508 8.1E-54 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS15460 ff0f50b732f01102eb62b5f30c0abb12 511 SUPERFAMILY SSF55729 5 140 6.69E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS15460 ff0f50b732f01102eb62b5f30c0abb12 511 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 3.9E-7 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 4.4E-77 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.698 T 29-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 Gene3D G3DSA:3.40.50.620 2 204 2.1E-72 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS10585 703e297950733dea45da80ff378ff20b 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.9E-108 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 Gene3D G3DSA:1.10.240.10 205 317 1.3E-30 T 29-03-2018 AL539_RS10585 703e297950733dea45da80ff378ff20b 338 SUPERFAMILY SSF52374 5 334 2.33E-90 T 29-03-2018 AL539_RS19730 0e56e42c768fff9b0f17e36af9ac84be 261 SUPERFAMILY SSF117856 30 260 1.83E-85 T 29-03-2018 AL539_RS19730 0e56e42c768fff9b0f17e36af9ac84be 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 2.9E-84 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AL539_RS19730 0e56e42c768fff9b0f17e36af9ac84be 261 Gene3D G3DSA:3.30.1330.80 119 225 1.8E-41 T 29-03-2018 AL539_RS19730 0e56e42c768fff9b0f17e36af9ac84be 261 PIRSF PIRSF001332 15 261 6.4E-95 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AL539_RS19730 0e56e42c768fff9b0f17e36af9ac84be 261 Gene3D G3DSA:3.30.1330.80 28 118 2.4E-36 T 29-03-2018 AL539_RS19730 0e56e42c768fff9b0f17e36af9ac84be 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 260 2.9E-98 T 29-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 Gene3D G3DSA:3.50.50.60 1 188 2.3E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 Gene3D G3DSA:1.10.8.260 273 324 1.7E-16 T 29-03-2018 IPR023166 HI0933 insert-like domain AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 SUPERFAMILY SSF51905 1 191 3.4E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 SUPERFAMILY SSF51905 340 397 3.4E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 5.0E-5 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.0E-5 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.0E-5 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 2.9E-130 T 29-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 SUPERFAMILY SSF160996 193 341 1.28E-42 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 Gene3D G3DSA:2.40.30.10 191 272 6.8E-23 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 Pfam PF03486 HI0933-like protein 5 395 9.5E-158 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 7.4E-9 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 7.4E-9 T 29-03-2018 AL539_RS12620 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.4E-9 T 29-03-2018 AL539_RS20640 35cb05bb683768607ad818adc71e2e35 252 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 7.4E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS20640 35cb05bb683768607ad818adc71e2e35 252 Gene3D G3DSA:1.10.260.40 2 80 1.6E-8 T 29-03-2018 AL539_RS20640 35cb05bb683768607ad818adc71e2e35 252 SUPERFAMILY SSF47413 5 68 1.41E-7 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS20640 35cb05bb683768607ad818adc71e2e35 252 SMART SM00530 10 65 2.4E-4 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS10235 b070616385dd22fd9bd6e9d5b8f0d508 254 SUPERFAMILY SSF56935 37 207 9.16E-5 T 29-03-2018 AL539_RS10235 b070616385dd22fd9bd6e9d5b8f0d508 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 3.9E-53 T 29-03-2018 IPR007433 Protein of unknown function DUF481 AL539_RS10235 b070616385dd22fd9bd6e9d5b8f0d508 254 Gene3D G3DSA:2.40.160.10 13 233 1.8E-6 T 29-03-2018 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 8.7E-17 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 39.817 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 SUPERFAMILY SSF52418 74 333 1.83E-94 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 4.1E-129 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 1.0E-105 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 Gene3D G3DSA:1.20.970.10 2 71 6.3E-17 T 29-03-2018 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 Gene3D G3DSA:3.40.1030.10 73 336 2.3E-97 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS05975 69c7dcdbb12f1138265e08eafa9b7091 336 SUPERFAMILY SSF47648 5 71 8.5E-19 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS13445 6c34129673c67851fae705a92e034227 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 7.4E-99 T 29-03-2018 AL539_RS13445 6c34129673c67851fae705a92e034227 305 PIRSF PIRSF005355 1 303 3.8E-85 T 29-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AL539_RS13445 6c34129673c67851fae705a92e034227 305 Pfam PF01040 UbiA prenyltransferase family 21 269 1.6E-37 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL539_RS13445 6c34129673c67851fae705a92e034227 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.722 T 29-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 SUPERFAMILY SSF51621 514 797 1.88E-96 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 442 453 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 PRINTS PR00107 Phosphocarrier protein signature 166 182 2.0E-7 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 PRINTS PR00107 Phosphocarrier protein signature 191 206 2.0E-7 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 PRINTS PR00107 Phosphocarrier protein signature 206 223 2.0E-7 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 166 173 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 SUPERFAMILY SSF53062 1 127 3.92E-33 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 410 483 1.4E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 551 570 1.0E-23 T 29-03-2018 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 1.0E-23 T 29-03-2018 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 755 767 1.0E-23 T 29-03-2018 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 719 734 1.0E-23 T 29-03-2018 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Gene3D G3DSA:3.30.1340.10 151 234 3.9E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Gene3D G3DSA:3.40.50.510 1 145 7.7E-34 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 514 796 1.3E-97 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Gene3D G3DSA:3.50.30.10 404 502 7.8E-27 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Pfam PF03610 PTS system fructose IIA component 3 113 1.8E-24 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 126 6.1E-37 T 29-03-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Gene3D G3DSA:1.10.274.10 291 403 2.4E-24 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Pfam PF05524 PEP-utilising enzyme, N-terminal 273 385 4.8E-23 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Gene3D G3DSA:3.20.20.60 508 799 3.1E-92 T 29-03-2018 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 Pfam PF00381 PTS HPr component phosphorylation site 158 233 3.0E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 271 797 2.0E-141 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 SUPERFAMILY SSF47831 296 402 2.35E-23 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 SUPERFAMILY SSF55594 157 240 2.62E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 SUPERFAMILY SSF52009 384 504 2.62E-31 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS14145 e8588b1bb5df2ab09f6fdac8a7214053 799 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 158 232 1.1E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 SUPERFAMILY SSF53901 213 401 1.05E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.1E-45 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.8E-27 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 SMART SM00825 Beta-ketoacyl synthase 4 403 3.0E-14 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 SUPERFAMILY SSF53901 1 251 1.06E-66 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 Gene3D G3DSA:3.40.47.10 4 257 3.8E-62 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07085 8ebc45a342d98c13edcc6040884dd5dd 403 Gene3D G3DSA:3.40.47.10 258 401 3.9E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 342 7.5E-46 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 340 5.8E-41 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 SMART SM00065 36 180 1.4E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 Pfam PF01590 GAF domain 37 169 4.5E-10 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 Gene3D G3DSA:3.30.450.40 27 178 2.2E-19 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 Gene3D G3DSA:3.30.70.270 179 348 2.6E-51 T 29-03-2018 AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 SUPERFAMILY SSF55781 28 171 3.49E-21 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 SMART SM00267 165 344 3.0E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24775 8960f0f1b6b9b75663cab467457054ae 349 SUPERFAMILY SSF55073 188 343 1.73E-44 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 3.3E-267 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 Gene3D G3DSA:3.30.499.10 305 466 1.2E-52 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 Gene3D G3DSA:3.40.1060.10 154 288 2.8E-44 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-51 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 3.3E-161 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 SUPERFAMILY SSF53732 1 465 9.81E-167 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.859 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 Gene3D G3DSA:3.30.499.10 1 153 5.7E-39 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL539_RS14000 5ef5e917518eeb7775fff70010543640 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL539_RS26050 4c2cd3d67273af33a398811f2041476d 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 299 4.2E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS26050 4c2cd3d67273af33a398811f2041476d 321 Gene3D G3DSA:1.10.3720.10 18 318 9.0E-31 T 29-03-2018 AL539_RS26050 4c2cd3d67273af33a398811f2041476d 321 SUPERFAMILY SSF161098 105 302 3.79E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02185 abb366c30a7cdbd7a8e23656ad7c3014 130 Gene3D G3DSA:3.40.50.300 7 124 5.9E-7 T 29-03-2018 AL539_RS02185 abb366c30a7cdbd7a8e23656ad7c3014 130 Pfam PF03846 Cell division inhibitor SulA 17 96 9.5E-7 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AL539_RS02185 abb366c30a7cdbd7a8e23656ad7c3014 130 SUPERFAMILY SSF52540 23 97 2.07E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 3.1E-70 T 29-03-2018 AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 Gene3D G3DSA:3.40.50.720 54 252 1.7E-61 T 29-03-2018 AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 Gene3D G3DSA:3.40.50.720 1 53 1.6E-11 T 29-03-2018 AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.6E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.6E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.6E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.6E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.6E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.6E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 SUPERFAMILY SSF51735 5 244 3.79E-82 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 7.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19740 5244ddfd13ef094a5e30ede668a063ac 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 7.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 SUPERFAMILY SSF52540 211 458 1.42E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Gene3D G3DSA:3.40.50.300 6 211 1.3E-33 T 29-03-2018 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Gene3D G3DSA:1.10.10.10 406 534 1.2E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.9E-187 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Pfam PF09382 RQC domain 409 517 2.6E-35 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.6E-251 T 29-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 SMART SM00487 25 221 1.1E-27 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Pfam PF16124 RecQ zinc-binding 346 407 4.6E-18 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 SMART SM00490 253 334 9.3E-29 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Gene3D G3DSA:3.40.50.300 213 405 2.4E-50 T 29-03-2018 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 4.7E-20 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Gene3D G3DSA:1.10.150.80 536 610 9.3E-27 T 29-03-2018 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 SMART SM00341 533 611 2.1E-22 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 SUPERFAMILY SSF52540 17 202 9.06E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 SMART SM00956 414 517 1.7E-49 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL539_RS11715 51d9119f88532ec0e26e1fd7c786df65 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 6.6E-18 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.318 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Gene3D G3DSA:3.40.50.20 2 95 2.4E-37 T 29-03-2018 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.9E-35 T 29-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 5.5E-186 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 29-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Gene3D G3DSA:3.90.600.10 330 423 1.1E-34 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 SUPERFAMILY SSF56059 104 319 1.52E-68 T 29-03-2018 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 6.7E-83 T 29-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 SMART SM01210 330 423 4.3E-55 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 5.7E-29 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Gene3D G3DSA:3.30.470.20 191 329 8.5E-64 T 29-03-2018 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 SMART SM01209 103 296 1.4E-142 T 29-03-2018 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 Gene3D G3DSA:3.30.1490.20 134 189 4.5E-24 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 SUPERFAMILY SSF51246 329 424 5.23E-33 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL539_RS11135 0d33817e7ee68144ba4dedc9c049e775 429 SUPERFAMILY SSF52440 1 103 7.91E-37 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 SUPERFAMILY SSF56059 115 326 2.75E-42 T 29-03-2018 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 32.727 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 Gene3D G3DSA:3.30.1490.20 130 187 5.6E-11 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 Gene3D G3DSA:3.40.50.20 1 124 1.1E-26 T 29-03-2018 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 Gene3D G3DSA:3.30.470.20 188 329 1.9E-29 T 29-03-2018 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 1.7E-52 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 PIRSF PIRSF039102 1 329 1.1E-76 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 5.4E-20 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 SUPERFAMILY SSF52440 3 114 4.6E-27 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 3.8E-98 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18495 ecd3e63ef0293d555041379678e8bc0a 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS03995 9dfc67c3068c97d388ef1092faee2677 342 SUPERFAMILY SSF53850 29 258 1.46E-48 T 29-03-2018 AL539_RS03995 9dfc67c3068c97d388ef1092faee2677 342 SMART SM00062 38 267 4.8E-53 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS03995 9dfc67c3068c97d388ef1092faee2677 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 1.1E-29 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS03995 9dfc67c3068c97d388ef1092faee2677 342 Gene3D G3DSA:3.40.190.10 28 140 1.9E-19 T 29-03-2018 AL539_RS03995 9dfc67c3068c97d388ef1092faee2677 342 Gene3D G3DSA:3.40.190.10 141 230 2.7E-17 T 29-03-2018 AL539_RS20925 bbfd205f311d505e17c9349fc217b3c1 209 Gene3D G3DSA:1.20.1050.10 99 209 2.0E-14 T 29-03-2018 AL539_RS20925 bbfd205f311d505e17c9349fc217b3c1 209 SUPERFAMILY SSF47616 77 208 5.44E-39 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS20925 bbfd205f311d505e17c9349fc217b3c1 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 4.9E-33 T 29-03-2018 IPR007494 Glutaredoxin 2, C-terminal AL539_RS20925 bbfd205f311d505e17c9349fc217b3c1 209 Gene3D G3DSA:3.40.30.10 1 98 2.7E-15 T 29-03-2018 AL539_RS20925 bbfd205f311d505e17c9349fc217b3c1 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 5.7E-72 T 29-03-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 AL539_RS20925 bbfd205f311d505e17c9349fc217b3c1 209 SUPERFAMILY SSF52833 1 77 7.35E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS20925 bbfd205f311d505e17c9349fc217b3c1 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 5.8E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS24290 7e180f84c5f6ffbb387271fd93deb1e7 112 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 3.5E-26 T 29-03-2018 IPR015392 Domain of unknown function DUF1971 AL539_RS24290 7e180f84c5f6ffbb387271fd93deb1e7 112 SUPERFAMILY SSF51197 4 101 1.65E-32 T 29-03-2018 AL539_RS24290 7e180f84c5f6ffbb387271fd93deb1e7 112 Gene3D G3DSA:2.60.120.10 6 107 3.0E-41 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS24290 7e180f84c5f6ffbb387271fd93deb1e7 112 PIRSF PIRSF020632 3 112 8.7E-63 T 29-03-2018 IPR014510 Tellurite resistance predicted, YeaR AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 PRINTS PR00073 Coprogen oxidase signature 129 151 3.2E-70 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 PRINTS PR00073 Coprogen oxidase signature 266 292 3.2E-70 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 PRINTS PR00073 Coprogen oxidase signature 238 265 3.2E-70 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 PRINTS PR00073 Coprogen oxidase signature 94 118 3.2E-70 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 PRINTS PR00073 Coprogen oxidase signature 31 47 3.2E-70 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 PRINTS PR00073 Coprogen oxidase signature 166 195 3.2E-70 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 SUPERFAMILY SSF102886 5 305 1.44E-137 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 Gene3D G3DSA:3.40.1500.10 2 305 1.0E-138 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 29-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 8.7E-131 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 PIRSF PIRSF000166 2 305 8.4E-129 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS11970 d5524014c54afbf42ac5587679d107f6 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.967 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.944 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 SUPERFAMILY SSF52954 463 570 8.91E-34 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 Gene3D G3DSA:3.40.50.800 461 571 1.2E-34 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 9.1E-39 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 SUPERFAMILY SSF55826 218 390 9.55E-31 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.8E-26 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 PIRSF PIRSF001535 1 571 1.7E-264 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.6E-16 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.6E-16 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.6E-16 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.6E-16 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 SUPERFAMILY SSF55681 407 478 2.13E-97 T 29-03-2018 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 SUPERFAMILY SSF55681 10 237 2.13E-97 T 29-03-2018 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 Pfam PF03129 Anticodon binding domain 475 568 1.6E-22 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.5E-245 T 29-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL539_RS07875 b0ae6c44f8b6988053e96892f39d330e 571 Gene3D G3DSA:3.30.930.10 11 460 1.6E-94 T 29-03-2018 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 PIRSF PIRSF000437 19 808 0.0 T 29-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.367 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 Pfam PF01553 Acyltransferase 289 424 1.7E-23 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 SMART SM00563 300 427 7.8E-27 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 Gene3D G3DSA:3.40.1130.10 235 531 3.1E-35 T 29-03-2018 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 PIRSF PIRSF500064 2 808 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AL539_RS11405 343bdcd63e02d8c6f6b4bcbb684b1673 808 SUPERFAMILY SSF69593 236 489 1.19E-25 T 29-03-2018 AL539_RS19395 d4a2cb4d7a4ea7900cf23a0ff8ba91ce 668 Pfam PF00593 TonB dependent receptor 234 666 4.0E-40 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS19395 d4a2cb4d7a4ea7900cf23a0ff8ba91ce 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 137 5.4E-12 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS19395 d4a2cb4d7a4ea7900cf23a0ff8ba91ce 668 Gene3D G3DSA:2.170.130.10 43 157 1.4E-11 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS19395 d4a2cb4d7a4ea7900cf23a0ff8ba91ce 668 Gene3D G3DSA:2.40.170.20 158 668 6.8E-59 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS19395 d4a2cb4d7a4ea7900cf23a0ff8ba91ce 668 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 668 9.6E-86 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS19395 d4a2cb4d7a4ea7900cf23a0ff8ba91ce 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AL539_RS19395 d4a2cb4d7a4ea7900cf23a0ff8ba91ce 668 SUPERFAMILY SSF56935 36 668 9.16E-86 T 29-03-2018 AL539_RS25255 f33c86604de1166ff843b8478358f5bf 114 Gene3D G3DSA:3.20.160.10 2 112 1.0E-49 T 29-03-2018 AL539_RS25255 f33c86604de1166ff843b8478358f5bf 114 Pfam PF08888 HopJ type III effector protein 4 111 1.6E-49 T 29-03-2018 IPR014984 HopJ type III effector protein AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 Gene3D G3DSA:1.10.10.60 234 275 2.6E-15 T 29-03-2018 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 Pfam PF02311 AraC-like ligand binding domain 18 150 7.6E-26 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 SUPERFAMILY SSF51215 31 156 3.53E-18 T 29-03-2018 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 SUPERFAMILY SSF46689 227 273 2.11E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 SUPERFAMILY SSF46689 174 224 4.93E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 Pfam PF12833 Helix-turn-helix domain 196 273 4.9E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 Gene3D G3DSA:1.10.10.60 170 233 2.0E-13 T 29-03-2018 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 SMART SM00342 190 272 5.0E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS25025 b100930d73a4af169ae96f578c7fab91 275 Gene3D G3DSA:2.60.120.280 11 164 3.9E-10 T 29-03-2018 AL539_RS22320 c6c91c0cc7e427988240e4540fa80692 392 Gene3D G3DSA:2.70.50.50 26 217 4.1E-56 T 29-03-2018 AL539_RS22320 c6c91c0cc7e427988240e4540fa80692 392 SUPERFAMILY SSF81296 26 217 4.34E-50 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS22320 c6c91c0cc7e427988240e4540fa80692 392 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 2.3E-37 T 29-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL539_RS22320 c6c91c0cc7e427988240e4540fa80692 392 Gene3D G3DSA:2.10.10.20 348 392 2.9E-17 T 29-03-2018 AL539_RS22320 c6c91c0cc7e427988240e4540fa80692 392 SMART SM00495 349 392 3.1E-6 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS22320 c6c91c0cc7e427988240e4540fa80692 392 SUPERFAMILY SSF51055 340 389 3.79E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 2.0E-41 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 2.0E-173 T 29-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 Gene3D G3DSA:2.60.40.10 370 473 7.6E-29 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 SUPERFAMILY SSF54862 107 129 5.79E-33 T 29-03-2018 AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 SUPERFAMILY SSF54862 175 343 5.79E-33 T 29-03-2018 AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 Gene3D G3DSA:3.30.70.20 224 277 9.9E-11 T 29-03-2018 AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 Gene3D G3DSA:3.30.70.20 278 296 0.036 T 29-03-2018 AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 1.5E-28 T 29-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 Gene3D G3DSA:3.30.70.20 297 369 0.0032 T 29-03-2018 AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS12060 cfe81c1845c69dfe68d94a7b35a92ba1 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS07390 2593b3b8fe2b76193e5baa4775cb36a0 147 SUPERFAMILY SSF109604 27 113 6.73E-5 T 29-03-2018 AL539_RS07390 2593b3b8fe2b76193e5baa4775cb36a0 147 Gene3D G3DSA:1.10.1300.10 20 142 3.5E-4 T 29-03-2018 IPR002073 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain GO:0004114|GO:0007165 AL539_RS07390 2593b3b8fe2b76193e5baa4775cb36a0 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.5E-36 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL539_RS07390 2593b3b8fe2b76193e5baa4775cb36a0 147 Pfam PF02050 Flagellar FliJ protein 17 140 2.0E-29 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL539_RS08460 f019e7982d442aec08b0239f7a90b76f 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 29-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AL539_RS08460 f019e7982d442aec08b0239f7a90b76f 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL539_RS08460 f019e7982d442aec08b0239f7a90b76f 98 SUPERFAMILY SSF75471 1 94 5.89E-30 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL539_RS08460 f019e7982d442aec08b0239f7a90b76f 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.0E-21 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL539_RS08460 f019e7982d442aec08b0239f7a90b76f 98 Gene3D G3DSA:3.30.110.60 2 97 1.3E-26 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL539_RS08460 f019e7982d442aec08b0239f7a90b76f 98 SMART SM01103 3 86 1.3E-41 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 SUPERFAMILY SSF50341 16 157 1.57E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 SUPERFAMILY SSF52172 183 306 1.2E-25 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 PIRSF PIRSF002867 1 308 5.7E-103 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:2.40.50.180 39 104 3.0E-13 T 29-03-2018 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 Pfam PF01584 CheW-like domain 21 155 5.6E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 Pfam PF00072 Response regulator receiver domain 184 302 1.4E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:3.40.50.2300 176 308 2.6E-25 T 29-03-2018 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 SMART SM00448 182 302 5.0E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:2.30.30.40 105 147 2.7E-11 T 29-03-2018 AL539_RS16445 9e46e3b512d245501fe0abf0182c1701 308 SMART SM00260 17 153 3.8E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 2.6E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 2.6E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 2.6E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 2.6E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 2.6E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 73 186 1.5E-14 T 29-03-2018 IPR023214 HAD-like domain AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 186 1.4E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 SUPERFAMILY SSF56784 7 194 1.68E-36 T 29-03-2018 IPR023214 HAD-like domain AL539_RS19215 51d8484be13d3180985065d9f169aa12 205 Gene3D G3DSA:3.40.50.1000 2 199 1.5E-24 T 29-03-2018 IPR023214 HAD-like domain AL539_RS19125 451ed1333e062083a38c8e4257ffee64 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.0E-25 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL539_RS19125 451ed1333e062083a38c8e4257ffee64 104 SUPERFAMILY SSF103481 6 102 9.29E-18 T 29-03-2018 AL539_RS03180 61afc866d202361237ee4f0d5e104631 658 SUPERFAMILY SSF81345 11 323 4.58E-58 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS03180 61afc866d202361237ee4f0d5e104631 658 Pfam PF01032 FecCD transport family 26 321 1.1E-67 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS03180 61afc866d202361237ee4f0d5e104631 658 Pfam PF01032 FecCD transport family 354 657 7.1E-75 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS03180 61afc866d202361237ee4f0d5e104631 658 SUPERFAMILY SSF81345 347 657 4.05E-67 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS03180 61afc866d202361237ee4f0d5e104631 658 Gene3D G3DSA:1.10.3470.10 2 331 9.2E-47 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS03180 61afc866d202361237ee4f0d5e104631 658 Gene3D G3DSA:1.10.3470.10 341 658 3.4E-46 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 1.0E-22 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 PIRSF PIRSF000190 1 211 3.8E-80 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 SUPERFAMILY SSF50475 11 211 1.52E-63 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Gene3D G3DSA:2.30.110.10 10 211 6.2E-67 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.466 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 6.9E-89 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS22785 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 9.9E-19 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 Gene3D G3DSA:1.10.287.130 212 276 1.9E-12 T 29-03-2018 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 SMART SM00388 222 282 8.3E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 Gene3D G3DSA:3.30.565.10 277 430 2.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 SMART SM00387 321 430 1.1E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 428 5.7E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.2E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 SUPERFAMILY SSF55874 284 429 4.58E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 Pfam PF00672 HAMP domain 169 217 1.2E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS13000 87a605904ba3cbe40e5a12b26e2c44af 430 SMART SM00304 169 221 1.4E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 Gene3D G3DSA:3.30.70.1430 578 679 1.1E-15 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 Gene3D G3DSA:1.20.1640.10 838 1041 1.8E-37 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82693 138 184 9.59E-27 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82693 277 333 9.59E-27 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82714 733 816 4.58E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82714 185 274 6.67E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 Gene3D G3DSA:3.30.2090.10 183 278 4.4E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1042 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82866 842 1037 3.4E-42 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.6E-92 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82693 576 682 1.29E-25 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 Gene3D G3DSA:1.20.1640.10 290 512 1.9E-45 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 Gene3D G3DSA:3.30.70.1440 683 779 6.0E-22 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82866 299 499 3.92E-48 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 Gene3D G3DSA:3.30.70.1430 40 142 2.1E-25 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 Pfam PF00873 AcrB/AcrD/AcrF family 4 1037 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82693 41 134 6.8E-26 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82693 683 732 1.65E-23 T 29-03-2018 AL539_RS04220 74a04a427d39cbf88c6167e35362690a 1046 SUPERFAMILY SSF82693 819 868 1.65E-23 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.10 334 431 3.0E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.10 1280 1382 2.6E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.10 1383 1487 8.0E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 SUPERFAMILY SSF51120 3645 3679 8.37E-5 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 SUPERFAMILY SSF51120 3904 3990 8.37E-5 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.120.640 2613 2737 0.0023 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.120.640 683 821 0.002 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.120.640 2366 2472 0.0031 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.120.640 3542 3674 0.13 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.120.640 2517 2612 0.099 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.120.640 2197 2345 0.33 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.120.640 1627 1768 7.3E-5 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.1310 523 682 0.5 T 29-03-2018 AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.10 230 333 5.4E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.10 1176 1279 3.8E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.10 1073 1175 0.029 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.10 120 229 0.0075 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS03025 88eff989b3b64ef65f176e8f5384d01a 4046 Gene3D G3DSA:2.60.40.1290 432 522 2.5E-5 T 29-03-2018 AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 Gene3D G3DSA:3.40.50.300 1 139 1.2E-23 T 29-03-2018 AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 SUPERFAMILY SSF52540 1 208 1.44E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 SUPERFAMILY SSF48019 211 331 1.62E-30 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 2.9E-31 T 29-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 Gene3D G3DSA:1.20.272.10 220 336 2.5E-21 T 29-03-2018 AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 331 1.5E-101 T 29-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 Gene3D G3DSA:1.10.8.60 142 219 8.2E-19 T 29-03-2018 AL539_RS16105 e7ae6634a5b9353c3d5ea240e597c499 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 7.1E-46 T 29-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AL539_RS00965 86a3d413b2c7a4526a7b077b56f2323a 97 SMART SM00530 17 72 2.1E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS00965 86a3d413b2c7a4526a7b077b56f2323a 97 SUPERFAMILY SSF47413 15 76 2.56E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS00965 86a3d413b2c7a4526a7b077b56f2323a 97 Gene3D G3DSA:1.10.3100.10 10 93 4.3E-14 T 29-03-2018 IPR027910 YdiL-like domain AL539_RS00965 86a3d413b2c7a4526a7b077b56f2323a 97 Pfam PF01381 Helix-turn-helix 19 71 2.0E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS23350 ee490b37a0b566ef6c10d8d571726f2c 296 SUPERFAMILY SSF46785 6 103 7.38E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23350 ee490b37a0b566ef6c10d8d571726f2c 296 Gene3D G3DSA:3.40.190.10 179 264 7.9E-9 T 29-03-2018 AL539_RS23350 ee490b37a0b566ef6c10d8d571726f2c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.9E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23350 ee490b37a0b566ef6c10d8d571726f2c 296 SUPERFAMILY SSF53850 92 293 3.57E-22 T 29-03-2018 AL539_RS23350 ee490b37a0b566ef6c10d8d571726f2c 296 Gene3D G3DSA:3.40.190.10 92 178 6.1E-10 T 29-03-2018 AL539_RS23350 ee490b37a0b566ef6c10d8d571726f2c 296 Gene3D G3DSA:1.10.10.10 1 85 9.5E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23350 ee490b37a0b566ef6c10d8d571726f2c 296 Pfam PF03466 LysR substrate binding domain 92 291 2.1E-19 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 Gene3D G3DSA:3.40.50.720 1 158 2.3E-25 T 29-03-2018 AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 SUPERFAMILY SSF51735 6 166 7.01E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 165 3.0E-37 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 Gene3D G3DSA:1.10.1040.10 159 293 6.5E-33 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 SUPERFAMILY SSF48179 168 291 1.36E-35 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 288 9.7E-32 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL539_RS24615 9f7124df121f790a3dbd3e921635d464 302 PIRSF PIRSF000103 1 293 5.5E-55 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 Pfam PF00072 Response regulator receiver domain 5 112 4.7E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 Gene3D G3DSA:2.20.25.10 203 239 1.0E-8 T 29-03-2018 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 Pfam PF04397 LytTr DNA-binding domain 146 238 1.5E-21 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 SMART SM00448 2 112 1.9E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 Gene3D G3DSA:2.40.50.40 138 201 4.4E-4 T 29-03-2018 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 SMART SM00850 145 239 1.9E-24 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 Gene3D G3DSA:3.40.50.2300 1 137 5.7E-27 T 29-03-2018 AL539_RS14970 4f4e78d1a8bf373690bdb2676fd7a14c 242 SUPERFAMILY SSF52172 1 123 2.28E-28 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS22450 7a7c26d2f0d842748ca3e62ca6b6574c 341 Pfam PF01757 Acyltransferase family 8 326 4.1E-26 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL539_RS07565 d79e9d38a9f4902b75e3501db039907f 146 Pfam PF09842 Predicted membrane protein (DUF2069) 20 122 9.4E-34 T 29-03-2018 IPR018643 Protein of unknown function DUF2069, membrane AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 Gene3D G3DSA:3.40.50.720 161 240 5.1E-22 T 29-03-2018 AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.7E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0015 T 29-03-2018 AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.6E-58 T 29-03-2018 AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 Gene3D G3DSA:3.40.50.720 2 160 1.1E-42 T 29-03-2018 AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 SUPERFAMILY SSF51735 3 240 3.36E-75 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16960 c5a0758f21c7163d5b1b5ed3742abb80 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.0E-126 T 29-03-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.2E-39 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 SMART SM00967 5 81 1.2E-19 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.181 T 29-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 4.0E-86 T 29-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 Gene3D G3DSA:3.30.1330.30 1 76 1.6E-17 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 SUPERFAMILY SSF75217 69 244 1.24E-48 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.0E-19 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 SUPERFAMILY SSF55315 3 77 1.41E-19 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AL539_RS10595 b3b1447fbf7d9192303d036fc217709a 247 Gene3D G3DSA:3.40.1280.10 77 247 2.3E-49 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS09400 716e266eeb1963ca62c8fd23abc85026 42 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 3.1E-11 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS09545 716e266eeb1963ca62c8fd23abc85026 42 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 3.1E-11 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS17065 23795b622ed613c22471f4daaa1e3331 220 Gene3D G3DSA:3.30.70.1450 146 219 2.9E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS17065 23795b622ed613c22471f4daaa1e3331 220 SUPERFAMILY SSF51735 6 136 6.26E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS17065 23795b622ed613c22471f4daaa1e3331 220 Pfam PF02080 TrkA-C domain 154 214 3.6E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS17065 23795b622ed613c22471f4daaa1e3331 220 Pfam PF02254 TrkA-N domain 8 123 7.0E-28 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS17065 23795b622ed613c22471f4daaa1e3331 220 SUPERFAMILY SSF116726 134 216 1.07E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS17065 23795b622ed613c22471f4daaa1e3331 220 Gene3D G3DSA:3.40.50.720 3 145 8.7E-24 T 29-03-2018 AL539_RS09345 b0edd6e6783885985c928e26b40cf179 218 SUPERFAMILY SSF141571 53 216 9.81E-38 T 29-03-2018 AL539_RS09345 b0edd6e6783885985c928e26b40cf179 218 Pfam PF13599 Pentapeptide repeats (9 copies) 21 99 2.7E-11 T 29-03-2018 IPR001646 Pentapeptide repeat AL539_RS09345 b0edd6e6783885985c928e26b40cf179 218 SUPERFAMILY SSF141571 3 49 9.42E-8 T 29-03-2018 AL539_RS09345 b0edd6e6783885985c928e26b40cf179 218 Gene3D G3DSA:2.160.20.80 1 217 3.0E-41 T 29-03-2018 AL539_RS09500 b0edd6e6783885985c928e26b40cf179 218 SUPERFAMILY SSF141571 53 216 9.81E-38 T 29-03-2018 AL539_RS09500 b0edd6e6783885985c928e26b40cf179 218 Pfam PF13599 Pentapeptide repeats (9 copies) 21 99 2.7E-11 T 29-03-2018 IPR001646 Pentapeptide repeat AL539_RS09500 b0edd6e6783885985c928e26b40cf179 218 SUPERFAMILY SSF141571 3 49 9.42E-8 T 29-03-2018 AL539_RS09500 b0edd6e6783885985c928e26b40cf179 218 Gene3D G3DSA:2.160.20.80 1 217 3.0E-41 T 29-03-2018 AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 SUPERFAMILY SSF57716 142 190 1.62E-16 T 29-03-2018 AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 SUPERFAMILY SSF52540 2 141 2.2E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 Gene3D G3DSA:3.40.50.300 2 141 7.3E-44 T 29-03-2018 AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 Gene3D G3DSA:3.30.60.20 142 192 4.9E-18 T 29-03-2018 AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.629 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 29-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 PIRSF PIRSF035805 1 192 4.1E-57 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL539_RS01685 f23772a31ca9d546155f4c513f891ea9 192 Pfam PF00265 Thymidine kinase 2 186 8.6E-60 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL539_RS17310 9b066fe975bcf25a5747248774d616ed 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 6.5E-95 T 29-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 AL539_RS17310 9b066fe975bcf25a5747248774d616ed 286 Gene3D G3DSA:3.10.129.10 131 286 1.6E-54 T 29-03-2018 AL539_RS17310 9b066fe975bcf25a5747248774d616ed 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.7E-61 T 29-03-2018 AL539_RS17310 9b066fe975bcf25a5747248774d616ed 286 SUPERFAMILY SSF54637 116 283 3.3E-58 T 29-03-2018 IPR029069 HotDog domain AL539_RS17310 9b066fe975bcf25a5747248774d616ed 286 SUPERFAMILY SSF54637 6 114 4.06E-40 T 29-03-2018 IPR029069 HotDog domain AL539_RS17310 9b066fe975bcf25a5747248774d616ed 286 Gene3D G3DSA:3.10.129.10 2 116 9.8E-42 T 29-03-2018 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 Gene3D G3DSA:3.90.1150.10 1 174 3.2E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 Gene3D G3DSA:3.90.1150.10 307 422 3.7E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 Gene3D G3DSA:3.40.640.10 179 306 3.4E-44 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 8.8E-176 T 29-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 SUPERFAMILY SSF53383 18 419 4.08E-130 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 Pfam PF00202 Aminotransferase class-III 23 419 6.9E-129 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 PIRSF PIRSF000521 122 422 2.0E-42 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02805 90656261a07a662e6d0dd5d21d2e81ff 423 PIRSF PIRSF000521 2 128 9.1E-7 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 4.5E-35 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 SUPERFAMILY SSF46589 1 114 1.31E-27 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 SUPERFAMILY SSF55681 118 429 2.49E-97 T 29-03-2018 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.07 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 Gene3D G3DSA:3.30.930.10 107 435 5.8E-94 T 29-03-2018 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 6.8E-30 T 29-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 PIRSF PIRSF001529 1 435 1.4E-186 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 5.1E-172 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL539_RS01490 355f451cc9b372056f89776eae2c8b46 435 Gene3D G3DSA:1.10.287.40 2 106 1.9E-23 T 29-03-2018 AL539_RS08615 7da085df9d60aaf8a3eeb16986d2fb4b 776 SUPERFAMILY SSF52151 43 115 9.94E-58 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS08615 7da085df9d60aaf8a3eeb16986d2fb4b 776 SUPERFAMILY SSF52151 145 331 9.94E-58 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS08615 7da085df9d60aaf8a3eeb16986d2fb4b 776 Pfam PF01734 Patatin-like phospholipase 49 239 1.1E-26 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL539_RS08615 7da085df9d60aaf8a3eeb16986d2fb4b 776 Gene3D G3DSA:3.40.1090.10 30 363 4.9E-47 T 29-03-2018 AL539_RS08615 7da085df9d60aaf8a3eeb16986d2fb4b 776 Gene3D G3DSA:2.40.160.50 387 775 5.1E-20 T 29-03-2018 AL539_RS08615 7da085df9d60aaf8a3eeb16986d2fb4b 776 Pfam PF07244 Surface antigen variable number repeat 359 429 1.0E-5 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL539_RS05335 3f01dd4519b2600bad297ba205382235 37 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 1.4E-14 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS20975 074b79581eb5dfccd5841c74fd0c9f92 506 SUPERFAMILY SSF53720 26 499 5.24E-163 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS20975 074b79581eb5dfccd5841c74fd0c9f92 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS20975 074b79581eb5dfccd5841c74fd0c9f92 506 Gene3D G3DSA:3.40.309.10 290 481 2.7E-68 T 29-03-2018 AL539_RS20975 074b79581eb5dfccd5841c74fd0c9f92 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS20975 074b79581eb5dfccd5841c74fd0c9f92 506 Gene3D G3DSA:3.40.605.10 28 289 2.7E-95 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS20975 074b79581eb5dfccd5841c74fd0c9f92 506 Pfam PF00171 Aldehyde dehydrogenase family 38 493 5.8E-159 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS18805 5486ac270c533beac4f0db64b5587f8d 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 4.2E-51 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS18805 5486ac270c533beac4f0db64b5587f8d 272 Gene3D G3DSA:3.40.190.10 34 162 9.9E-34 T 29-03-2018 AL539_RS18805 5486ac270c533beac4f0db64b5587f8d 272 SUPERFAMILY SSF53850 7 259 1.03E-57 T 29-03-2018 AL539_RS18805 5486ac270c533beac4f0db64b5587f8d 272 SMART SM00079 39 261 0.0042 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL539_RS18805 5486ac270c533beac4f0db64b5587f8d 272 SMART SM00062 39 262 5.1E-45 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS18805 5486ac270c533beac4f0db64b5587f8d 272 Gene3D G3DSA:3.40.190.10 163 262 5.0E-8 T 29-03-2018 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 Gene3D G3DSA:3.60.21.10 19 348 3.3E-79 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 Gene3D G3DSA:3.90.780.10 349 609 5.0E-48 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 PRINTS PR01607 Apyrase family signature 287 307 2.7E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 PRINTS PR01607 Apyrase family signature 432 455 2.7E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 PRINTS PR01607 Apyrase family signature 247 270 2.7E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 PRINTS PR01607 Apyrase family signature 534 553 2.7E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 PRINTS PR01607 Apyrase family signature 219 236 2.7E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 PRINTS PR01607 Apyrase family signature 26 44 2.7E-28 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 27 651 0.0 T 29-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 SUPERFAMILY SSF55816 359 601 8.37E-36 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 Pfam PF00149 Calcineurin-like phosphoesterase 28 263 3.3E-11 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 Pfam PF02872 5'-nucleotidase, C-terminal domain 360 552 1.3E-20 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS13690 2df385c442c5242f950464e1a16f6666 651 SUPERFAMILY SSF56300 21 358 6.12E-88 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS08580 da97459a1e556b73bbda975ee5bc90a3 343 SUPERFAMILY SSF52540 5 243 9.58E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08580 da97459a1e556b73bbda975ee5bc90a3 343 Gene3D G3DSA:3.40.50.300 1 299 1.1E-74 T 29-03-2018 AL539_RS08580 da97459a1e556b73bbda975ee5bc90a3 343 SMART SM00382 29 214 1.8E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08580 da97459a1e556b73bbda975ee5bc90a3 343 Pfam PF08402 TOBE domain 276 341 4.6E-6 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL539_RS08580 da97459a1e556b73bbda975ee5bc90a3 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS08580 da97459a1e556b73bbda975ee5bc90a3 343 Pfam PF00005 ABC transporter 20 164 2.3E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS08580 da97459a1e556b73bbda975ee5bc90a3 343 SUPERFAMILY SSF50331 265 342 1.59E-8 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82693 137 183 2.88E-22 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82693 276 332 2.88E-22 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 Gene3D G3DSA:3.30.70.1440 671 769 5.1E-20 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 Gene3D G3DSA:1.20.1640.10 277 501 3.2E-53 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 Gene3D G3DSA:1.20.1640.10 810 1028 2.9E-36 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82693 564 670 6.8E-24 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.4E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82714 184 274 3.79E-24 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 Gene3D G3DSA:3.30.70.1430 39 141 5.6E-22 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82693 39 132 4.19E-23 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1038 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82693 807 856 6.45E-25 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82693 671 720 6.45E-25 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 Gene3D G3DSA:3.30.2090.10 182 276 2.0E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82714 721 805 2.09E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82866 830 1026 5.75E-45 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 Pfam PF00873 AcrB/AcrD/AcrF family 3 1026 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 SUPERFAMILY SSF82866 299 499 2.62E-53 T 29-03-2018 AL539_RS24750 7f2bbdfb779c0be198c769bf19a6dda2 1046 Gene3D G3DSA:3.30.70.1430 566 670 1.5E-16 T 29-03-2018 AL539_RS15255 d51840ae36b7c960d722b5bd9ad50fc7 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 4.0E-187 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL539_RS15255 d51840ae36b7c960d722b5bd9ad50fc7 378 SUPERFAMILY SSF51713 3 366 1.96E-164 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL539_RS15255 d51840ae36b7c960d722b5bd9ad50fc7 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 1.3E-178 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL539_RS15255 d51840ae36b7c960d722b5bd9ad50fc7 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 6.6E-97 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL539_RS15255 d51840ae36b7c960d722b5bd9ad50fc7 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.525 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL539_RS15255 d51840ae36b7c960d722b5bd9ad50fc7 378 Gene3D G3DSA:3.20.20.105 1 371 4.5E-162 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL539_RS14340 24392a93d333375046d5c92a879545bf 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.608 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL539_RS14340 24392a93d333375046d5c92a879545bf 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.5E-74 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL539_RS14340 24392a93d333375046d5c92a879545bf 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 1.7E-82 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL539_RS22805 36746ccd6f30999ad528a6877bff71c8 235 SUPERFAMILY SSF53720 9 180 2.36E-12 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS22805 36746ccd6f30999ad528a6877bff71c8 235 Gene3D G3DSA:3.40.605.10 25 222 1.4E-16 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS25035 86833de39b1d59ce338299b92b87fefd 140 Pfam PF00583 Acetyltransferase (GNAT) family 31 115 5.6E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS25035 86833de39b1d59ce338299b92b87fefd 140 SUPERFAMILY SSF55729 11 137 6.42E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS25035 86833de39b1d59ce338299b92b87fefd 140 Gene3D G3DSA:3.40.630.30 34 138 6.8E-19 T 29-03-2018 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 SUPERFAMILY SSF52374 4 226 1.11E-146 T 29-03-2018 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 SUPERFAMILY SSF52374 415 666 1.11E-146 T 29-03-2018 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 2.8E-26 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.5E-9 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 2.0E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Gene3D G3DSA:1.10.730.10 646 793 5.7E-34 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.422 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Gene3D G3DSA:3.40.50.620 402 645 1.6E-58 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Gene3D G3DSA:3.40.50.620 1 228 2.1E-80 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 816 1.8E-16 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 SUPERFAMILY SSF47323 660 856 1.2E-36 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 SUPERFAMILY SSF50677 226 414 1.88E-56 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 8.6E-79 T 29-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AL539_RS16115 fc7e9abe997ac905be535b50f82d4c40 857 Gene3D G3DSA:3.90.740.10 229 401 6.7E-55 T 29-03-2018 AL539_RS06640 1322286e0a70928b2121de32133a538e 151 Gene3D G3DSA:3.90.1170.40 1 149 1.5E-57 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS06640 1322286e0a70928b2121de32133a538e 151 SUPERFAMILY SSF54690 4 149 2.62E-55 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS06640 1322286e0a70928b2121de32133a538e 151 Pfam PF02391 MoaE protein 9 120 1.2E-36 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 SUPERFAMILY SSF52172 173 294 5.41E-21 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 PIRSF PIRSF002867 1 298 3.6E-86 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 SUPERFAMILY SSF50341 10 152 2.09E-29 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 SMART SM00260 11 147 3.2E-19 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 Pfam PF01584 CheW-like domain 14 149 2.6E-29 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 Gene3D G3DSA:2.30.30.40 99 141 9.9E-8 T 29-03-2018 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 Gene3D G3DSA:3.40.50.2300 161 303 1.1E-19 T 29-03-2018 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 Pfam PF00072 Response regulator receiver domain 175 289 4.6E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 Gene3D G3DSA:2.40.50.180 31 98 2.5E-11 T 29-03-2018 AL539_RS24575 567c82f5555cdc7f70a45a47db404937 304 SMART SM00448 173 290 2.1E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03430 b018a4d7b802c00ea56f5b1d8537b118 324 SMART SM00448 1 113 4.5E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03430 b018a4d7b802c00ea56f5b1d8537b118 324 Gene3D G3DSA:3.40.50.2300 1 153 9.6E-29 T 29-03-2018 AL539_RS03430 b018a4d7b802c00ea56f5b1d8537b118 324 Gene3D G3DSA:3.40.1550.10 154 323 5.2E-23 T 29-03-2018 IPR028976 CheC-like domain AL539_RS03430 b018a4d7b802c00ea56f5b1d8537b118 324 SUPERFAMILY SSF52172 1 116 1.85E-27 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS03430 b018a4d7b802c00ea56f5b1d8537b118 324 Pfam PF00072 Response regulator receiver domain 3 109 1.6E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03430 b018a4d7b802c00ea56f5b1d8537b118 324 SUPERFAMILY SSF103039 144 322 2.88E-29 T 29-03-2018 IPR028976 CheC-like domain AL539_RS24360 e2d7445db1ac03569ca40c4d8063f981 731 Gene3D G3DSA:3.30.1890.10 50 450 1.1E-25 T 29-03-2018 AL539_RS24360 e2d7445db1ac03569ca40c4d8063f981 731 Gene3D G3DSA:3.40.50.300 520 730 2.5E-32 T 29-03-2018 AL539_RS24360 e2d7445db1ac03569ca40c4d8063f981 731 Pfam PF13807 G-rich domain on putative tyrosine kinase 401 472 2.7E-10 T 29-03-2018 IPR032807 Tyrosine kinase, G-rich domain AL539_RS24360 e2d7445db1ac03569ca40c4d8063f981 731 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 527 723 8.2E-43 T 29-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AL539_RS24360 e2d7445db1ac03569ca40c4d8063f981 731 Pfam PF13614 AAA domain 557 681 3.9E-14 T 29-03-2018 IPR025669 AAA domain AL539_RS24360 e2d7445db1ac03569ca40c4d8063f981 731 Pfam PF02706 Chain length determinant protein 28 112 1.3E-9 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL539_RS24360 e2d7445db1ac03569ca40c4d8063f981 731 SUPERFAMILY SSF52540 545 721 5.6E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF14492 Elongation Factor G, domain II 402 475 1.0E-28 T 29-03-2018 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:2.40.30.10 272 393 1.0E-29 T 29-03-2018 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 1.0E-59 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.40.50.300 1 271 3.4E-51 T 29-03-2018 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.30.230.10 490 611 2.9E-37 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF00679 Elongation factor G C-terminus 598 684 2.1E-29 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 100.248 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.30.70.240 612 689 4.5E-29 T 29-03-2018 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF54211 477 596 1.29E-38 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF54980 599 689 7.55E-29 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF03764 Elongation factor G, domain IV 477 595 3.8E-42 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.7E-17 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF52540 3 279 2.78E-98 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF54980 402 479 1.91E-20 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 SMART SM00838 598 685 3.2E-47 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.30.70.870 394 489 2.9E-30 T 29-03-2018 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 2.0E-289 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF50447 262 400 2.87E-32 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS08260 d772aff9ddc7aff5a03623b4dec3a582 696 SMART SM00889 478 596 4.3E-60 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL539_RS02065 25f514524df39ddca22a8593b9fcff7e 306 Pfam PF08668 HDOD domain 39 233 4.3E-37 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL539_RS02065 25f514524df39ddca22a8593b9fcff7e 306 Gene3D G3DSA:1.10.3210.10 12 304 6.4E-31 T 29-03-2018 AL539_RS02065 25f514524df39ddca22a8593b9fcff7e 306 SUPERFAMILY SSF109604 24 299 2.51E-39 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 SUPERFAMILY SSF102114 84 277 1.8E-5 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 288 3.3E-123 T 29-03-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 Gene3D G3DSA:1.10.1060.10 86 119 0.29 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 Gene3D G3DSA:3.30.70.20 27 60 1.6E-4 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 Gene3D G3DSA:3.30.70.20 61 85 1.0E-8 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 Gene3D G3DSA:3.80.30.10 120 281 2.7E-21 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 SUPERFAMILY SSF54862 28 144 7.43E-14 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 PIRSF PIRSF000371 1 292 4.9E-91 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 Pfam PF13353 4Fe-4S single cluster domain 21 145 2.0E-7 T 29-03-2018 AL539_RS03125 6df84efb539408ba5dc2bca8346a28ba 293 Pfam PF04055 Radical SAM superfamily 29 225 2.5E-13 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS07785 020e87ca10f11c33488017faf9b4f5cf 256 Pfam PF00849 RNA pseudouridylate synthase 24 183 6.1E-33 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07785 020e87ca10f11c33488017faf9b4f5cf 256 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07785 020e87ca10f11c33488017faf9b4f5cf 256 Gene3D G3DSA:3.30.2350.10 14 251 3.1E-62 T 29-03-2018 AL539_RS07785 020e87ca10f11c33488017faf9b4f5cf 256 SUPERFAMILY SSF55120 11 252 1.07E-65 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS13355 560036f4076aebd738024f06b7c62677 270 SUPERFAMILY SSF53448 21 253 1.01E-5 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 29-03-2018 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 29-03-2018 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 29-03-2018 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 29-03-2018 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 Gene3D G3DSA:3.50.50.60 2 365 7.8E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 SUPERFAMILY SSF51905 5 177 2.73E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 SUPERFAMILY SSF51905 268 385 2.73E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 3.8E-138 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL539_RS09105 ebdd48acd8f3407038c5e966af66a690 402 Pfam PF01494 FAD binding domain 5 347 1.5E-29 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AL539_RS25835 b86a4a2898fd5ad81248579e19e226fd 242 Pfam PF00005 ABC transporter 18 170 3.6E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS25835 b86a4a2898fd5ad81248579e19e226fd 242 Gene3D G3DSA:3.40.50.300 1 242 2.3E-67 T 29-03-2018 AL539_RS25835 b86a4a2898fd5ad81248579e19e226fd 242 SMART SM00382 27 218 1.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS25835 b86a4a2898fd5ad81248579e19e226fd 242 PIRSF PIRSF039085 1 242 2.2E-92 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL539_RS25835 b86a4a2898fd5ad81248579e19e226fd 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS25835 b86a4a2898fd5ad81248579e19e226fd 242 SUPERFAMILY SSF52540 3 233 1.5E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01910 d04fdc9623c25df4c1ac3e0d4506ce5e 148 Pfam PF03724 META domain 34 141 1.0E-27 T 29-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 7.9E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 7.9E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 SMART SM00342 193 276 7.7E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 SUPERFAMILY SSF46689 178 226 3.58E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 SUPERFAMILY SSF46689 229 277 6.27E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 Gene3D G3DSA:1.10.10.60 230 281 2.2E-14 T 29-03-2018 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 Gene3D G3DSA:1.10.10.60 182 229 2.4E-12 T 29-03-2018 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 Pfam PF12833 Helix-turn-helix domain 199 276 3.4E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04550 56bdcd61c6e7d7e7a1b842236b7d7319 286 Gene3D G3DSA:2.60.120.280 6 181 1.1E-4 T 29-03-2018 AL539_RS18100 7093ea6c27dacbcece2b6ce614b47b08 330 Gene3D G3DSA:3.20.20.30 4 328 2.0E-70 T 29-03-2018 AL539_RS18100 7093ea6c27dacbcece2b6ce614b47b08 330 Pfam PF00296 Luciferase-like monooxygenase 18 303 1.6E-37 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL539_RS18100 7093ea6c27dacbcece2b6ce614b47b08 330 SUPERFAMILY SSF51679 5 326 1.22E-80 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL539_RS18100 7093ea6c27dacbcece2b6ce614b47b08 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 326 1.6E-130 T 29-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 Gene3D G3DSA:3.30.420.40 6 229 5.5E-33 T 29-03-2018 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 SUPERFAMILY SSF53067 223 342 7.13E-20 T 29-03-2018 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 SUPERFAMILY SSF53067 381 459 7.13E-20 T 29-03-2018 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.5E-9 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 PRINTS PR00301 70kDa heat shock protein signature 399 419 3.5E-9 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.5E-9 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.5E-9 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 SUPERFAMILY SSF53067 6 209 1.06E-29 T 29-03-2018 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 Pfam PF00012 Hsp70 protein 90 316 1.7E-16 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 Gene3D G3DSA:3.30.420.40 230 432 1.6E-14 T 29-03-2018 AL539_RS03240 3957e1c20bda2d13c8653bf82e43f744 936 Pfam PF12531 DNA-K related protein 686 933 5.4E-102 T 29-03-2018 IPR021030 Protein of unknown function DUF3731 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 SUPERFAMILY SSF81923 4 156 7.46E-43 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.1E-13 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.4E-11 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 29-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.0E-28 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 SMART SM01086 766 855 1.0E-37 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Gene3D G3DSA:3.40.50.300 157 342 7.1E-26 T 29-03-2018 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Gene3D G3DSA:1.10.8.60 343 547 9.7E-43 T 29-03-2018 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 SUPERFAMILY SSF52540 159 545 5.58E-101 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Gene3D G3DSA:3.40.50.300 552 765 1.9E-53 T 29-03-2018 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 2.4E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.9E-57 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 SUPERFAMILY SSF52540 546 853 6.95E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 SMART SM00382 597 767 1.1E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 SMART SM00382 198 344 3.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Gene3D G3DSA:1.10.8.60 766 856 1.9E-24 T 29-03-2018 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 Gene3D G3DSA:1.10.1780.10 1 151 5.6E-32 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS15080 6d4668dfef27e2fdb336dfc3b3f12182 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL539_RS10425 84aadbabeff9fb49e2cb6c8148bd610b 91 Pfam PF04077 DsrH like protein 10 86 2.7E-23 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL539_RS10425 84aadbabeff9fb49e2cb6c8148bd610b 91 Gene3D G3DSA:3.40.1260.10 1 88 9.2E-20 T 29-03-2018 AL539_RS10425 84aadbabeff9fb49e2cb6c8148bd610b 91 SUPERFAMILY SSF75169 1 90 2.5E-23 T 29-03-2018 IPR027396 DsrEFH-like AL539_RS10425 84aadbabeff9fb49e2cb6c8148bd610b 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 1.7E-25 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL539_RS17340 55484e5b00835d563cd9934451961f6c 244 SUPERFAMILY SSF75217 95 243 5.43E-34 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS17340 55484e5b00835d563cd9934451961f6c 244 Gene3D G3DSA:3.30.1330.30 2 93 4.6E-14 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AL539_RS17340 55484e5b00835d563cd9934451961f6c 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 3.3E-29 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL539_RS17340 55484e5b00835d563cd9934451961f6c 244 SUPERFAMILY SSF55315 4 93 3.3E-11 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AL539_RS17340 55484e5b00835d563cd9934451961f6c 244 Gene3D G3DSA:3.40.1280.10 94 244 2.3E-34 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 SUPERFAMILY SSF51735 1 335 1.58E-98 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 Gene3D G3DSA:3.90.25.10 207 254 1.6E-11 T 29-03-2018 AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 Gene3D G3DSA:3.90.25.10 255 336 1.4E-24 T 29-03-2018 AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 9.8E-6 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 9.8E-6 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 9.8E-6 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 3.3E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.1E-141 T 29-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 AL539_RS18525 3b9f9aded98aa972d0c3d7d4e39788f3 338 Gene3D G3DSA:3.40.50.720 1 206 1.5E-38 T 29-03-2018 AL539_RS13795 bcf0476c46113905e07a3673ecd62f72 617 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 581 1.3E-37 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS13795 bcf0476c46113905e07a3673ecd62f72 617 Gene3D G3DSA:1.20.1480.30 286 383 1.9E-4 T 29-03-2018 AL539_RS13795 bcf0476c46113905e07a3673ecd62f72 617 SUPERFAMILY SSF58104 315 615 6.19E-66 T 29-03-2018 AL539_RS13795 bcf0476c46113905e07a3673ecd62f72 617 SMART SM00283 354 615 9.2E-65 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS13795 bcf0476c46113905e07a3673ecd62f72 617 Gene3D G3DSA:3.30.450.20 160 263 3.5E-4 T 29-03-2018 AL539_RS13795 bcf0476c46113905e07a3673ecd62f72 617 Gene3D G3DSA:1.10.287.950 384 587 3.0E-46 T 29-03-2018 AL539_RS13795 bcf0476c46113905e07a3673ecd62f72 617 Gene3D G3DSA:3.30.450.20 74 159 7.5E-11 T 29-03-2018 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Gene3D G3DSA:2.40.50.140 652 753 1.2E-26 T 29-03-2018 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 SUPERFAMILY SSF158832 3 321 3.53E-121 T 29-03-2018 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Gene3D G3DSA:1.10.3500.10 102 355 1.5E-78 T 29-03-2018 IPR023323 Tex-like domain AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Gene3D G3DSA:1.10.150.310 499 630 1.4E-41 T 29-03-2018 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 29-03-2018 IPR010994 RuvA domain 2-like AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 SUPERFAMILY SSF47781 560 632 6.23E-19 T 29-03-2018 IPR010994 RuvA domain 2-like AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Gene3D G3DSA:1.10.3500.10 356 498 8.2E-42 T 29-03-2018 IPR023323 Tex-like domain AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.8E-27 T 29-03-2018 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 SUPERFAMILY SSF50249 638 723 1.79E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 SMART SM00316 649 720 5.4E-25 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Gene3D G3DSA:1.10.10.650 2 101 2.0E-35 T 29-03-2018 IPR023319 Tex-like protein, HTH domain AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 SUPERFAMILY SSF53098 322 469 4.1E-51 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 3.5E-56 T 29-03-2018 IPR032639 Tex protein, YqgF-like domain AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Pfam PF00575 S1 RNA binding domain 649 720 4.5E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 Pfam PF09371 Tex-like protein N-terminal domain 9 192 1.2E-71 T 29-03-2018 IPR018974 Tex-like protein, N-terminal AL539_RS12975 4e1c22b19a9c41c2bd9d6607ede1ad50 773 SMART SM00732 326 424 1.2E-37 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL539_RS16770 52359ca2f4693488136becf50e272b4b 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 2.7E-28 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16770 52359ca2f4693488136becf50e272b4b 130 Gene3D G3DSA:1.20.1300.10 4 130 1.4E-26 T 29-03-2018 AL539_RS16770 52359ca2f4693488136becf50e272b4b 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16770 52359ca2f4693488136becf50e272b4b 130 SUPERFAMILY SSF81343 8 130 4.41E-34 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16770 52359ca2f4693488136becf50e272b4b 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 3.3E-39 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16770 52359ca2f4693488136becf50e272b4b 130 PIRSF PIRSF000178 2 130 5.8E-32 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16770 52359ca2f4693488136becf50e272b4b 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS17860 18745a75c2160e01ffb478e9f3e121fa 388 SUPERFAMILY SSF56059 267 385 1.01E-83 T 29-03-2018 AL539_RS17860 18745a75c2160e01ffb478e9f3e121fa 388 SUPERFAMILY SSF56059 1 169 1.01E-83 T 29-03-2018 AL539_RS17860 18745a75c2160e01ffb478e9f3e121fa 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.0E-157 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AL539_RS17860 18745a75c2160e01ffb478e9f3e121fa 388 SUPERFAMILY SSF52440 174 280 8.06E-42 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS13430 ee7c227c11da518ed46edf47190f37a2 335 PIRSF PIRSF004532 1 331 1.1E-134 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL539_RS13430 ee7c227c11da518ed46edf47190f37a2 335 SUPERFAMILY SSF56655 1 324 1.1E-106 T 29-03-2018 AL539_RS13430 ee7c227c11da518ed46edf47190f37a2 335 Gene3D G3DSA:3.30.540.10 1 151 1.1E-54 T 29-03-2018 AL539_RS13430 ee7c227c11da518ed46edf47190f37a2 335 Gene3D G3DSA:3.30.540.10 152 335 3.1E-51 T 29-03-2018 AL539_RS13430 ee7c227c11da518ed46edf47190f37a2 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.9E-128 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL539_RS13430 ee7c227c11da518ed46edf47190f37a2 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.9E-166 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL539_RS15775 803146713e66d98931634828c243042a 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS15775 803146713e66d98931634828c243042a 185 PIRSF PIRSF024622 1 185 6.7E-88 T 29-03-2018 IPR016824 Tfp pilus assembly protein FimT AL539_RS15775 803146713e66d98931634828c243042a 185 Gene3D G3DSA:3.30.700.10 19 179 3.5E-11 T 29-03-2018 AL539_RS15775 803146713e66d98931634828c243042a 185 Pfam PF12019 Type II transport protein GspH 55 149 2.5E-6 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL539_RS15775 803146713e66d98931634828c243042a 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 38 7.1E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS15775 803146713e66d98931634828c243042a 185 SUPERFAMILY SSF54523 19 148 4.24E-15 T 29-03-2018 AL539_RS15775 803146713e66d98931634828c243042a 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 9.5E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 SMART SM00490 257 338 1.0E-28 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 5.4E-28 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 Gene3D G3DSA:3.40.50.300 6 221 4.0E-60 T 29-03-2018 AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 SUPERFAMILY SSF52540 73 357 3.6E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 SMART SM00487 23 225 2.2E-57 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.7E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 Pfam PF03880 DbpA RNA binding domain 386 456 5.7E-19 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL539_RS13680 86dc427b83a0c32d4c0f4fc16c9eba4b 459 Gene3D G3DSA:3.40.50.300 222 454 4.6E-42 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 Gene3D G3DSA:3.30.70.1430 46 146 1.0E-19 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 SUPERFAMILY SSF82693 46 138 1.67E-18 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 SUPERFAMILY SSF82714 719 793 4.71E-7 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 Gene3D G3DSA:3.30.70.1430 560 660 3.8E-6 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 SUPERFAMILY SSF82866 292 488 3.53E-37 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 SUPERFAMILY SSF82693 150 183 9.16E-10 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 SUPERFAMILY SSF82693 269 325 9.16E-10 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 SUPERFAMILY SSF82714 185 266 8.37E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 Pfam PF00873 AcrB/AcrD/AcrF family 10 1016 2.1E-159 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.8E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.8E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.8E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.8E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.8E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 Gene3D G3DSA:3.30.2090.10 718 795 2.8E-8 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 Gene3D G3DSA:1.20.1640.10 269 490 2.3E-34 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 Gene3D G3DSA:1.20.1640.10 811 1018 1.5E-40 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 SUPERFAMILY SSF82866 791 1019 9.02E-49 T 29-03-2018 AL539_RS21130 88045f1c6d47a872f7fa45de571c1727 1052 Gene3D G3DSA:3.30.2090.10 181 268 2.4E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 1.1E-38 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 466 1.0E-78 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 SUPERFAMILY SSF161070 3 477 1.44E-148 T 29-03-2018 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.0E-36 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 9.0E-36 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 9.0E-36 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.0E-36 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 9.0E-36 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 9.0E-36 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS06370 1a00cedc4115dc95f49fe7ae8209b410 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 9.0E-36 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS19670 7236e417204b4f7951f16e616456fcab 322 Pfam PF00682 HMGL-like 27 296 3.6E-50 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL539_RS19670 7236e417204b4f7951f16e616456fcab 322 Gene3D G3DSA:3.20.20.70 23 319 5.3E-104 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS19670 7236e417204b4f7951f16e616456fcab 322 SUPERFAMILY SSF51569 23 313 3.85E-73 T 29-03-2018 AL539_RS09750 7780f1563d442ff44650a5a30fa417d9 251 Gene3D G3DSA:3.20.20.370 1 244 2.0E-67 T 29-03-2018 AL539_RS09750 7780f1563d442ff44650a5a30fa417d9 251 Pfam PF04794 YdjC-like protein 2 230 1.6E-50 T 29-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like AL539_RS09750 7780f1563d442ff44650a5a30fa417d9 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 38.123 T 29-03-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AL539_RS09750 7780f1563d442ff44650a5a30fa417d9 251 SUPERFAMILY SSF88713 1 242 1.04E-65 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 SUPERFAMILY SSF50249 976 1064 2.18E-5 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Gene3D G3DSA:1.10.150.280 780 894 1.4E-10 T 29-03-2018 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF02811 PHP domain 8 171 4.8E-41 T 29-03-2018 IPR004013 PHP domain GO:0003824 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 5.0E-26 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Gene3D G3DSA:3.20.20.140 1 247 1.2E-33 T 29-03-2018 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Gene3D G3DSA:2.40.50.140 972 1073 6.3E-19 T 29-03-2018 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 SMART SM00481 7 74 6.6E-25 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 9.4E-175 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.0E-11 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL539_RS07690 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 SUPERFAMILY SSF89550 5 263 6.47E-12 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 PIRSF PIRSF001467 1 163 4.9E-28 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 Gene3D G3DSA:2.40.100.10 1 164 3.8E-50 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 SUPERFAMILY SSF50891 1 162 1.24E-58 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.8E-12 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.8E-12 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 8.8E-12 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS01675 6f22b9dc137fcce6a43f7dc5007c0525 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 5.2E-48 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.8E-44 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.8E-44 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-44 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-44 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-44 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.8E-44 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 Gene3D G3DSA:3.75.10.10 3 404 2.7E-96 T 29-03-2018 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.909 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 Pfam PF02274 Amidinotransferase 18 403 2.0E-110 T 29-03-2018 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 2.4E-172 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 SUPERFAMILY SSF55909 3 406 2.55E-128 T 29-03-2018 AL539_RS09845 5daba5666962dadea476a1834d5a975b 406 PIRSF PIRSF006356 1 406 4.0E-155 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SMART SM00851 955 1041 1.3E-25 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.107 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Gene3D G3DSA:3.30.1490.20 655 744 3.6E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.1E-41 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Gene3D G3DSA:3.40.50.20 4 109 5.6E-40 T 29-03-2018 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Gene3D G3DSA:1.10.1030.10 404 538 4.6E-54 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.386 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SUPERFAMILY SSF48108 397 554 4.84E-52 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Gene3D G3DSA:3.40.50.20 539 654 9.5E-62 T 29-03-2018 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Gene3D G3DSA:3.30.470.20 119 403 3.6E-65 T 29-03-2018 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.7E-72 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 6.8E-38 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SUPERFAMILY SSF52335 937 1071 2.75E-34 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SUPERFAMILY SSF56059 673 932 1.41E-103 T 29-03-2018 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SUPERFAMILY SSF52440 1 127 3.74E-50 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Gene3D G3DSA:3.40.50.1380 937 1072 1.4E-26 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 29-03-2018 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Gene3D G3DSA:3.30.470.20 745 935 6.0E-45 T 29-03-2018 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 SMART SM01096 424 547 1.6E-74 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS14635 5a8b5eb872a544bc55a4aaeb62122170 1077 Pfam PF02142 MGS-like domain 956 1041 8.5E-16 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS01150 2ce5db6da9919b0bd8126a2f52665311 586 Gene3D G3DSA:3.40.50.410 381 580 4.7E-17 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS01150 2ce5db6da9919b0bd8126a2f52665311 586 Pfam PF06213 Cobalamin biosynthesis protein CobT 10 267 9.6E-12 T 29-03-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AL539_RS01150 2ce5db6da9919b0bd8126a2f52665311 586 SMART SM00327 408 578 2.4E-10 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS01150 2ce5db6da9919b0bd8126a2f52665311 586 Pfam PF13519 von Willebrand factor type A domain 413 521 1.8E-6 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS01150 2ce5db6da9919b0bd8126a2f52665311 586 SUPERFAMILY SSF53300 407 578 4.45E-16 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS22400 8c4c4dcda68776b1f1be7d36612b7df7 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 3.9E-57 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS22400 8c4c4dcda68776b1f1be7d36612b7df7 446 Pfam PF01554 MatE 19 179 1.5E-25 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS22400 8c4c4dcda68776b1f1be7d36612b7df7 446 Pfam PF01554 MatE 247 404 2.6E-22 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS22400 8c4c4dcda68776b1f1be7d36612b7df7 446 PIRSF PIRSF006603 2 446 1.2E-67 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS01980 337304ea8928a153fd3490bc91ebdc1f 246 Pfam PF11140 Protein of unknown function (DUF2913) 29 240 1.6E-83 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.3E-47 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.3E-47 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.3E-47 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.3E-47 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.3E-47 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.03 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 PIRSF PIRSF001438 1 312 1.9E-121 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 Gene3D G3DSA:3.40.190.10 108 200 7.0E-38 T 29-03-2018 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.4E-19 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 29-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 Gene3D G3DSA:3.30.160.40 222 305 2.5E-23 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 5.1E-114 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 5.2E-79 T 29-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 SUPERFAMILY SSF53850 6 220 3.04E-85 T 29-03-2018 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 Gene3D G3DSA:3.40.190.10 1 107 6.8E-46 T 29-03-2018 AL539_RS11605 f5539b32c7f20b499dce7550c181855f 312 SUPERFAMILY SSF54782 221 310 8.89E-28 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS21530 5909f421a89a175fbe76fef7e11d381e 291 Gene3D G3DSA:1.10.10.10 1 85 1.0E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21530 5909f421a89a175fbe76fef7e11d381e 291 Gene3D G3DSA:3.40.190.10 87 291 1.4E-7 T 29-03-2018 AL539_RS21530 5909f421a89a175fbe76fef7e11d381e 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 4.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21530 5909f421a89a175fbe76fef7e11d381e 291 SUPERFAMILY SSF46785 3 82 2.9E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21530 5909f421a89a175fbe76fef7e11d381e 291 Pfam PF03466 LysR substrate binding domain 93 288 4.3E-13 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21530 5909f421a89a175fbe76fef7e11d381e 291 SUPERFAMILY SSF53850 87 288 9.77E-20 T 29-03-2018 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.0E-34 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.0E-34 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.0E-34 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.0E-34 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.0E-34 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 2.0E-34 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 PIRSF PIRSF000513 4 263 5.3E-99 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 Gene3D G3DSA:3.40.1190.20 1 263 2.8E-57 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 SUPERFAMILY SSF53613 6 260 4.05E-60 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 253 3.3E-77 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 1.8E-72 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22160 c819cf99140a29fb9e9fd18ed93b6559 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 30.152 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 Gene3D G3DSA:1.10.10.10 4 89 2.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 SUPERFAMILY SSF53850 95 302 8.69E-38 T 29-03-2018 AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 Pfam PF03466 LysR substrate binding domain 94 298 2.6E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.8E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 Gene3D G3DSA:3.40.190.10 180 267 3.8E-22 T 29-03-2018 AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.6E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 SUPERFAMILY SSF46785 6 88 7.23E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24225 8e18c163954608bd0bd33545f693d276 308 Gene3D G3DSA:3.40.190.10 95 179 1.3E-15 T 29-03-2018 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 Gene3D G3DSA:1.10.287.950 210 298 0.037 T 29-03-2018 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 SMART SM00283 271 532 2.5E-47 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 495 4.6E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 Gene3D G3DSA:1.10.287.950 299 536 1.5E-44 T 29-03-2018 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.6E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 20 1.6E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.6E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 SUPERFAMILY SSF58104 224 533 6.28E-61 T 29-03-2018 AL539_RS05635 ba3a2dc5bfb0528681d1d747c0911a72 541 SMART SM00304 203 256 5.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 Gene3D G3DSA:1.20.5.510 6 34 2.7E-16 T 29-03-2018 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 Gene3D G3DSA:2.102.10.10 35 196 4.6E-40 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 8.2E-74 T 29-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 4.3E-11 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.0E-13 T 29-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 SUPERFAMILY SSF50022 30 189 6.75E-43 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL539_RS14480 d7e276221f6f2f8d3631636f445b643e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL539_RS04145 f9a9bfbd3f05f6b8ffb5b64063dd6f69 173 SUPERFAMILY SSF46689 3 69 9.98E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS04145 f9a9bfbd3f05f6b8ffb5b64063dd6f69 173 Gene3D G3DSA:1.10.357.10 54 169 6.5E-13 T 29-03-2018 AL539_RS04145 f9a9bfbd3f05f6b8ffb5b64063dd6f69 173 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 51 5.3E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS04145 f9a9bfbd3f05f6b8ffb5b64063dd6f69 173 Gene3D G3DSA:1.10.10.60 2 53 6.2E-10 T 29-03-2018 AL539_RS23215 f9f588bc45256734a939e59d10bb2754 538 SUPERFAMILY SSF49785 22 164 2.69E-21 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS23215 f9f588bc45256734a939e59d10bb2754 538 Pfam PF02018 Carbohydrate binding domain 22 143 2.0E-7 T 29-03-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AL539_RS23215 f9f588bc45256734a939e59d10bb2754 538 SUPERFAMILY SSF54060 291 530 4.0E-52 T 29-03-2018 AL539_RS23215 f9f588bc45256734a939e59d10bb2754 538 Gene3D G3DSA:2.60.120.260 22 165 5.8E-16 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS23215 f9f588bc45256734a939e59d10bb2754 538 Pfam PF04231 Endonuclease I 294 530 4.5E-103 T 29-03-2018 IPR007346 Endonuclease I GO:0004518 AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 667 41.587 T 29-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 SUPERFAMILY SSF52540 149 286 1.11E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 Pfam PF08351 Domain of unknown function (DUF1726) 68 124 6.7E-5 T 29-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 SUPERFAMILY SSF55729 462 541 1.36E-13 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 SUPERFAMILY SSF55729 374 426 1.36E-13 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 Pfam PF13718 GNAT acetyltransferase 2 378 493 3.3E-20 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 Gene3D G3DSA:3.40.50.300 90 292 7.4E-13 T 29-03-2018 AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 Pfam PF05127 Helicase 176 343 1.0E-57 T 29-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AL539_RS22680 0bda0b89730d02d0bb00cd25e482f319 675 Gene3D G3DSA:3.40.630.30 306 666 1.6E-14 T 29-03-2018 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 SUPERFAMILY SSF53067 12 131 4.53E-36 T 29-03-2018 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 Gene3D G3DSA:3.30.420.40 3 124 1.0E-37 T 29-03-2018 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 SUPERFAMILY SSF53067 136 308 1.68E-47 T 29-03-2018 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 SUPERFAMILY SSF109604 312 500 1.19E-46 T 29-03-2018 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 PIRSF PIRSF001267 2 501 1.2E-200 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 Gene3D G3DSA:3.30.420.150 125 304 1.6E-37 T 29-03-2018 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 2.1E-86 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL539_RS15180 7f6a782685ff307f3a9ff2aafc083c93 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 5.2E-101 T 29-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Gene3D G3DSA:3.40.630.30 464 597 4.0E-15 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.6E-23 T 29-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 SUPERFAMILY SSF48557 3 456 4.4E-140 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PIRSF PIRSF036456 1 624 0.0 T 29-03-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 568 8.1E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Gene3D G3DSA:1.10.275.10 2 107 4.8E-32 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 SUPERFAMILY SSF55729 466 584 6.62E-16 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Pfam PF00206 Lyase 6 301 4.4E-88 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.105 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Gene3D G3DSA:1.20.200.10 108 375 2.3E-92 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 Gene3D G3DSA:1.10.40.30 376 433 2.3E-25 T 29-03-2018 AL539_RS10335 dceb3f91bfe73b13392538444819f0f3 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 4.4E-201 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS12410 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:3.40.190.10 88 177 3.1E-13 T 29-03-2018 AL539_RS12410 26104c9bdcc2a52a33130a4d7116b7e0 296 SUPERFAMILY SSF53850 87 290 1.03E-27 T 29-03-2018 AL539_RS12410 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:1.10.10.10 1 83 2.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12410 26104c9bdcc2a52a33130a4d7116b7e0 296 SUPERFAMILY SSF46785 1 87 5.89E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12410 26104c9bdcc2a52a33130a4d7116b7e0 296 Pfam PF03466 LysR substrate binding domain 87 289 3.6E-32 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS12410 26104c9bdcc2a52a33130a4d7116b7e0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.5E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12410 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:3.40.190.10 178 265 5.5E-11 T 29-03-2018 AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 Gene3D G3DSA:2.10.10.20 521 563 0.11 T 29-03-2018 AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 Pfam PF00182 Chitinase class I 106 325 6.4E-30 T 29-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 SMART SM00495 436 478 1.2E-17 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 SMART SM00495 519 564 1.5 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 Gene3D G3DSA:2.10.10.20 432 480 2.1E-17 T 29-03-2018 AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 SUPERFAMILY SSF53955 87 350 5.34E-53 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 SUPERFAMILY SSF51055 430 479 1.24E-16 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS15410 f05e6f08b45ab681cb18d9f88b3f3be6 567 Gene3D G3DSA:1.10.530.10 85 343 1.0E-53 T 29-03-2018 AL539_RS14230 b3f1d01caa3e82f55d8ad8c04eea23cb 439 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 2.6E-29 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL539_RS14230 b3f1d01caa3e82f55d8ad8c04eea23cb 439 Pfam PF07804 HipA-like C-terminal domain 150 402 2.3E-48 T 29-03-2018 IPR012893 HipA-like, C-terminal AL539_RS14230 b3f1d01caa3e82f55d8ad8c04eea23cb 439 Pfam PF13657 HipA N-terminal domain 5 103 2.9E-23 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL539_RS20250 324b9b6d363f863937057a1f41675814 333 Gene3D G3DSA:3.40.50.1360 60 326 6.6E-30 T 29-03-2018 AL539_RS20250 324b9b6d363f863937057a1f41675814 333 Gene3D G3DSA:1.10.10.60 9 59 2.9E-12 T 29-03-2018 AL539_RS20250 324b9b6d363f863937057a1f41675814 333 Pfam PF04198 Putative sugar-binding domain 66 320 2.1E-77 T 29-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AL539_RS20250 324b9b6d363f863937057a1f41675814 333 SUPERFAMILY SSF100950 70 320 3.6E-64 T 29-03-2018 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 Gene3D G3DSA:3.40.50.720 1 150 1.5E-47 T 29-03-2018 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 SUPERFAMILY SSF55347 126 272 7.85E-62 T 29-03-2018 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.743 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 Gene3D G3DSA:1.10.1740.10 312 400 1.2E-28 T 29-03-2018 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 3.9E-39 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.8E-37 T 29-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 PIRSF PIRSF006205 1 401 9.1E-152 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 4.7E-46 T 29-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 397 9.2E-161 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 SUPERFAMILY SSF51735 2 150 1.91E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS07735 63961af15ee14d2e4a5a31347a9d4cf8 401 SUPERFAMILY SSF69055 301 398 6.02E-31 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AL539_RS21630 d5b864234d123f79d79d8a318a1c363d 180 Gene3D G3DSA:1.20.5.810 10 42 2.5E-13 T 29-03-2018 AL539_RS21630 d5b864234d123f79d79d8a318a1c363d 180 Gene3D G3DSA:1.20.1290.10 43 179 6.1E-15 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL539_RS21630 d5b864234d123f79d79d8a318a1c363d 180 SUPERFAMILY SSF69118 1 178 1.32E-45 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL539_RS05630 9afd9a99a8e175267235cb0e0a0450c3 120 Gene3D G3DSA:3.30.479.10 1 120 1.1E-41 T 29-03-2018 AL539_RS05630 9afd9a99a8e175267235cb0e0a0450c3 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL539_RS05630 9afd9a99a8e175267235cb0e0a0450c3 120 SUPERFAMILY SSF55620 1 118 5.56E-41 T 29-03-2018 AL539_RS05630 9afd9a99a8e175267235cb0e0a0450c3 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 2.1E-35 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL539_RS05630 9afd9a99a8e175267235cb0e0a0450c3 120 PIRSF PIRSF006113 1 120 3.0E-53 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.5E-37 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 Gene3D G3DSA:3.50.50.60 311 415 3.6E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 SUPERFAMILY SSF46977 444 581 1.31E-43 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 SUPERFAMILY SSF51905 3 250 2.14E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 SUPERFAMILY SSF51905 361 441 2.14E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 29-03-2018 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 29-03-2018 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 Gene3D G3DSA:3.50.50.60 4 276 1.9E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 SUPERFAMILY SSF56425 227 358 3.59E-41 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 PIRSF PIRSF000171 1 575 1.1E-45 T 29-03-2018 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.1E-9 T 29-03-2018 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.1E-9 T 29-03-2018 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 Gene3D G3DSA:1.20.58.100 423 541 2.4E-30 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.0E-236 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 29-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 Gene3D G3DSA:4.10.80.40 543 576 4.9E-11 T 29-03-2018 AL539_RS10820 8d4a3701e685391ddad2cf033b9ea923 599 Pfam PF00890 FAD binding domain 7 397 3.8E-113 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS22675 d13485bbdf8925bd94fb77cf667332dd 324 SUPERFAMILY SSF109709 152 240 2.75E-5 T 29-03-2018 AL539_RS22675 d13485bbdf8925bd94fb77cf667332dd 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 69 227 1.6E-21 T 29-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL539_RS22675 d13485bbdf8925bd94fb77cf667332dd 324 Gene3D G3DSA:3.90.1530.10 40 152 3.9E-8 T 29-03-2018 AL539_RS22675 d13485bbdf8925bd94fb77cf667332dd 324 SMART SM00470 58 149 2.5E-5 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS22675 d13485bbdf8925bd94fb77cf667332dd 324 SUPERFAMILY SSF110849 72 150 2.12E-8 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS22675 d13485bbdf8925bd94fb77cf667332dd 324 Pfam PF02195 ParB-like nuclease domain 78 145 1.7E-7 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 Gene3D G3DSA:3.30.70.20 111 160 1.3E-9 T 29-03-2018 AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 Pfam PF12838 4Fe-4S dicluster domain 35 78 6.2E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 9.9E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 Gene3D G3DSA:3.30.70.20 42 69 8.5E-11 T 29-03-2018 AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 SUPERFAMILY SSF54862 32 158 8.79E-19 T 29-03-2018 AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 18 154 3.0E-43 T 29-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 Gene3D G3DSA:1.10.1060.10 5 41 9.7E-5 T 29-03-2018 AL539_RS20355 89723fe819a3d9ddcd866eaf5ef62bfd 161 Gene3D G3DSA:3.30.70.20 70 110 2.0E-5 T 29-03-2018 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 SUPERFAMILY SSF50486 208 310 4.32E-33 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 Pfam PF00551 Formyl transferase 6 182 1.7E-47 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 Gene3D G3DSA:3.40.50.170 2 209 2.8E-69 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 4.0E-108 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 SUPERFAMILY SSF53328 5 210 3.92E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.9E-29 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.868 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS12015 98ff508922b05de38e238174ffebd561 315 Gene3D G3DSA:3.10.25.10 210 311 2.3E-30 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS17505 715c7b5628e00918b1712eea919968b0 329 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 32 326 1.8E-82 T 29-03-2018 IPR018707 Protein of unknown function DUF2219 AL539_RS17505 715c7b5628e00918b1712eea919968b0 329 Gene3D G3DSA:2.40.128.140 18 326 4.3E-82 T 29-03-2018 IPR018707 Protein of unknown function DUF2219 AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 SMART SM00487 393 594 2.0E-18 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 SUPERFAMILY SSF52540 346 600 3.63E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 Gene3D G3DSA:3.40.50.300 633 1017 1.1E-9 T 29-03-2018 AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 Pfam PF13643 Domain of unknown function (DUF4145) 43 136 7.2E-7 T 29-03-2018 IPR025285 Domain of unknown function DUF4145 AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 Pfam PF00271 Helicase conserved C-terminal domain 669 776 6.4E-6 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 Pfam PF04851 Type III restriction enzyme, res subunit 397 554 1.4E-35 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 Gene3D G3DSA:3.40.50.300 182 572 1.8E-30 T 29-03-2018 AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 Pfam PF08463 EcoEI R protein C-terminal 1046 1179 3.8E-17 T 29-03-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 SUPERFAMILY SSF52540 419 458 1.01E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14115 5cb3d98e9b709de645ca6f3ff634991e 1205 SUPERFAMILY SSF52540 694 777 1.01E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01595 a437ae78205ff8760932ff9e8c6491bf 374 Gene3D G3DSA:2.30.30.280 216 285 2.1E-24 T 29-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AL539_RS01595 a437ae78205ff8760932ff9e8c6491bf 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.825 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AL539_RS01595 a437ae78205ff8760932ff9e8c6491bf 374 Gene3D G3DSA:3.40.50.620 1 215 7.4E-64 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS01595 a437ae78205ff8760932ff9e8c6491bf 374 Gene3D G3DSA:2.40.30.10 287 374 4.3E-28 T 29-03-2018 AL539_RS01595 a437ae78205ff8760932ff9e8c6491bf 374 SUPERFAMILY SSF52402 5 247 2.65E-56 T 29-03-2018 AL539_RS01595 a437ae78205ff8760932ff9e8c6491bf 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 1.3E-151 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AL539_RS01595 a437ae78205ff8760932ff9e8c6491bf 374 Pfam PF03054 tRNA methyl transferase 7 365 1.3E-141 T 29-03-2018 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 2.1E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 Gene3D G3DSA:1.10.10.60 367 444 4.3E-11 T 29-03-2018 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 SMART SM00448 7 118 5.7E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 SUPERFAMILY SSF52172 8 192 9.96E-39 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 Pfam PF00072 Response regulator receiver domain 9 118 2.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 SMART SM00382 168 308 1.7E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 Pfam PF00158 Sigma-54 interaction domain 148 311 3.9E-64 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 SUPERFAMILY SSF52540 148 371 7.53E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 Gene3D G3DSA:3.40.50.300 143 317 1.6E-24 T 29-03-2018 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 Gene3D G3DSA:1.10.8.60 318 366 4.3E-12 T 29-03-2018 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 SUPERFAMILY SSF46689 391 443 8.06E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS21870 b8a1f82a0625b9a412e6694378d289fa 449 Gene3D G3DSA:3.40.50.2300 2 142 1.7E-31 T 29-03-2018 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 29-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.023 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 Gene3D G3DSA:3.40.50.9100 2 149 1.2E-68 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 SUPERFAMILY SSF52304 4 146 3.27E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 PIRSF PIRSF001399 3 149 1.2E-59 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 7.0E-69 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 Pfam PF01220 Dehydroquinase class II 6 142 6.1E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS10995 0c3ffccf47d9bc2c800db40b3da3a0e9 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 5.0E-64 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 SUPERFAMILY SSF52540 142 380 2.25E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.5E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.5E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 SUPERFAMILY SSF46689 354 444 2.37E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 Gene3D G3DSA:3.40.50.2300 10 132 0.0015 T 29-03-2018 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 Pfam PF00158 Sigma-54 interaction domain 142 308 2.1E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 Gene3D G3DSA:3.40.50.300 141 314 2.6E-26 T 29-03-2018 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 Gene3D G3DSA:1.10.10.60 408 446 1.6E-15 T 29-03-2018 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 Gene3D G3DSA:1.10.8.60 315 407 5.4E-20 T 29-03-2018 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 SUPERFAMILY SSF52172 64 185 2.02E-9 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 SMART SM00382 162 305 1.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS12625 8e9a27327db467af515d320dc7a5622a 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS17745 5a62c195511be2466fb9a8960af931e2 323 SUPERFAMILY SSF53335 91 323 6.18E-33 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS17745 5a62c195511be2466fb9a8960af931e2 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.5E-173 T 29-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AL539_RS17745 5a62c195511be2466fb9a8960af931e2 323 Gene3D G3DSA:3.40.50.150 81 320 1.2E-22 T 29-03-2018 AL539_RS17745 5a62c195511be2466fb9a8960af931e2 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.8E-147 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL539_RS17745 5a62c195511be2466fb9a8960af931e2 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.72 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 SUPERFAMILY SSF52540 295 526 1.89E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 SUPERFAMILY SSF52540 6 256 2.66E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 Gene3D G3DSA:3.40.50.300 3 274 5.0E-66 T 29-03-2018 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 Gene3D G3DSA:3.40.50.300 275 543 9.3E-76 T 29-03-2018 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 266 3.2E-6 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 538 6.4E-4 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 SMART SM00382 35 235 2.6E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 SMART SM00382 312 504 6.8E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 Pfam PF00005 ABC transporter 304 455 1.6E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS23915 5834e419c09d422eaee1f472eb54ca0a 543 Pfam PF00005 ABC transporter 26 185 3.0E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 Gene3D G3DSA:1.10.287.1080 119 211 2.6E-21 T 29-03-2018 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.57 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 8.9E-32 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 SUPERFAMILY SSF101386 123 210 2.43E-25 T 29-03-2018 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 7.0E-22 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 SUPERFAMILY SSF141734 12 122 3.27E-45 T 29-03-2018 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.586 T 29-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL539_RS01655 2b8e7d1b10d91511bdbbaecc654a79ae 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 8.0E-18 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL539_RS08830 bab9bc88774901873968dc0fac685ed2 316 SMART SM00829 12 312 1.3E-13 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS08830 bab9bc88774901873968dc0fac685ed2 316 SUPERFAMILY SSF50129 4 154 6.09E-35 T 29-03-2018 IPR011032 GroES-like AL539_RS08830 bab9bc88774901873968dc0fac685ed2 316 Gene3D G3DSA:3.90.180.10 219 316 2.2E-7 T 29-03-2018 AL539_RS08830 bab9bc88774901873968dc0fac685ed2 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 5.4E-7 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS08830 bab9bc88774901873968dc0fac685ed2 316 Gene3D G3DSA:3.90.180.10 1 211 1.8E-54 T 29-03-2018 AL539_RS08830 bab9bc88774901873968dc0fac685ed2 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 1.6E-19 T 29-03-2018 AL539_RS08830 bab9bc88774901873968dc0fac685ed2 316 SUPERFAMILY SSF51735 122 243 2.84E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:2.40.270.10 1024 1241 2.4E-77 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 29-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 29-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.2E-22 T 29-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 4.3E-157 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:2.40.50.150 814 949 6.0E-30 T 29-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 SUPERFAMILY SSF64484 343 939 0.0 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 SUPERFAMILY SSF64484 11 226 0.0 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.285 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1800.10 1266 1308 7.6E-12 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 29-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:2.40.50.100 715 795 5.2E-27 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1100.10 648 713 4.6E-14 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1100.10 284 647 1.1E-78 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1100.10 19 265 2.1E-50 T 29-03-2018 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 29-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 8.1E-17 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS11190 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 1.9E-7 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS06615 cea9fb3a0f33632ac50dc60a4bb3c07d 324 SUPERFAMILY SSF52540 32 302 2.11E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06615 cea9fb3a0f33632ac50dc60a4bb3c07d 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 5.6E-18 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS06615 cea9fb3a0f33632ac50dc60a4bb3c07d 324 SMART SM00382 33 239 2.8E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS06615 cea9fb3a0f33632ac50dc60a4bb3c07d 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 9.7E-24 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS06615 cea9fb3a0f33632ac50dc60a4bb3c07d 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS06615 cea9fb3a0f33632ac50dc60a4bb3c07d 324 Gene3D G3DSA:3.40.50.300 1 324 1.3E-73 T 29-03-2018 AL539_RS06615 cea9fb3a0f33632ac50dc60a4bb3c07d 324 Pfam PF00005 ABC transporter 25 181 2.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.6E-24 T 29-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 SUPERFAMILY SSF46785 3 77 3.36E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 Gene3D G3DSA:3.30.1360.40 76 151 3.4E-26 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 3.8E-21 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 4.0E-20 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 7.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 7.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 7.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 7.0E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 Gene3D G3DSA:1.10.10.10 8 69 5.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 SUPERFAMILY SSF55252 82 151 6.15E-19 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.981 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL539_RS13905 046371bbc5628dedf2f061c0f4d3e0db 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 8.7E-44 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL539_RS22255 da249015408d2b1b7157e403802b5c91 615 Gene3D G3DSA:1.10.1370.10 40 563 4.1E-46 T 29-03-2018 AL539_RS22255 da249015408d2b1b7157e403802b5c91 615 SUPERFAMILY SSF55486 3 550 5.13E-77 T 29-03-2018 AL539_RS22255 da249015408d2b1b7157e403802b5c91 615 Pfam PF01432 Peptidase family M3 285 490 2.5E-16 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL539_RS22255 da249015408d2b1b7157e403802b5c91 615 Pfam PF01432 Peptidase family M3 145 236 2.7E-4 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL539_RS08775 d3234d54ecbdf518026e0a9f3852f359 253 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.4E-69 T 29-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL539_RS08775 d3234d54ecbdf518026e0a9f3852f359 253 PIRSF PIRSF000386 1 252 1.1E-100 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL539_RS08775 d3234d54ecbdf518026e0a9f3852f359 253 Gene3D G3DSA:3.40.1280.10 1 169 5.2E-73 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS08775 d3234d54ecbdf518026e0a9f3852f359 253 Gene3D G3DSA:1.10.1270.20 170 253 1.3E-33 T 29-03-2018 AL539_RS08775 d3234d54ecbdf518026e0a9f3852f359 253 SUPERFAMILY SSF75217 1 245 3.14E-102 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS08775 d3234d54ecbdf518026e0a9f3852f359 253 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 253 117.598 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL539_RS08775 d3234d54ecbdf518026e0a9f3852f359 253 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.6E-109 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL539_RS25875 6ad511b737504badb9567da1f4c05a22 294 Gene3D G3DSA:3.40.190.10 176 260 1.2E-22 T 29-03-2018 AL539_RS25875 6ad511b737504badb9567da1f4c05a22 294 SUPERFAMILY SSF53850 89 293 1.57E-44 T 29-03-2018 AL539_RS25875 6ad511b737504badb9567da1f4c05a22 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 9.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25875 6ad511b737504badb9567da1f4c05a22 294 SUPERFAMILY SSF46785 6 86 1.44E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25875 6ad511b737504badb9567da1f4c05a22 294 Gene3D G3DSA:1.10.10.10 4 87 9.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25875 6ad511b737504badb9567da1f4c05a22 294 Gene3D G3DSA:3.40.190.10 88 175 3.7E-15 T 29-03-2018 AL539_RS25875 6ad511b737504badb9567da1f4c05a22 294 Pfam PF03466 LysR substrate binding domain 88 289 2.8E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS08195 9d83caf102d744a5cde689800056279b 195 Gene3D G3DSA:2.40.160.20 7 195 3.5E-18 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS08195 9d83caf102d744a5cde689800056279b 195 SUPERFAMILY SSF56925 21 195 6.8E-19 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS08195 9d83caf102d744a5cde689800056279b 195 Pfam PF13505 Outer membrane protein beta-barrel domain 7 195 5.3E-19 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS23705 eb0e43c05d4958c905b11da0dfcf7f0a 272 Gene3D G3DSA:2.30.330.10 192 263 8.7E-11 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS23705 eb0e43c05d4958c905b11da0dfcf7f0a 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 4.4E-11 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS23705 eb0e43c05d4958c905b11da0dfcf7f0a 272 SUPERFAMILY SSF101801 198 262 1.44E-9 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS06075 2319787e858918f00da295a9c99551fd 777 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL539_RS06075 2319787e858918f00da295a9c99551fd 777 Pfam PF11842 Domain of unknown function (DUF3362) 585 717 3.3E-43 T 29-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AL539_RS06075 2319787e858918f00da295a9c99551fd 777 Pfam PF08497 Radical SAM N-terminal 24 370 1.4E-142 T 29-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AL539_RS06075 2319787e858918f00da295a9c99551fd 777 SMART SM00729 367 617 1.6E-4 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS06075 2319787e858918f00da295a9c99551fd 777 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 1.0E-262 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 AL539_RS06075 2319787e858918f00da295a9c99551fd 777 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.104 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 AL539_RS06075 2319787e858918f00da295a9c99551fd 777 Pfam PF04055 Radical SAM superfamily 371 576 6.9E-20 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS06075 2319787e858918f00da295a9c99551fd 777 SUPERFAMILY SSF102114 370 431 4.84E-11 T 29-03-2018 AL539_RS06075 2319787e858918f00da295a9c99551fd 777 SUPERFAMILY SSF102114 461 605 4.84E-11 T 29-03-2018 AL539_RS06075 2319787e858918f00da295a9c99551fd 777 Gene3D G3DSA:3.20.20.70 274 723 2.7E-30 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 Pfam PF03023 MviN-like protein 30 483 3.6E-143 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 PIRSF PIRSF002869 1 517 1.5E-147 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.792 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS14935 9356a9f481f486844b140ffec3c4a078 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 510 1.1E-135 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL539_RS12240 c562198dba6bef060c2905f6a7f0969d 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS12240 c562198dba6bef060c2905f6a7f0969d 245 SUPERFAMILY SSF52540 1 238 5.32E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12240 c562198dba6bef060c2905f6a7f0969d 245 Gene3D G3DSA:3.40.50.300 1 245 6.6E-77 T 29-03-2018 AL539_RS12240 c562198dba6bef060c2905f6a7f0969d 245 PIRSF PIRSF039085 1 244 5.4E-105 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL539_RS12240 c562198dba6bef060c2905f6a7f0969d 245 Pfam PF00005 ABC transporter 17 168 4.8E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS12240 c562198dba6bef060c2905f6a7f0969d 245 SMART SM00382 26 216 1.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 Gene3D G3DSA:3.40.630.30 300 444 2.6E-18 T 29-03-2018 AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 PIRSF PIRSF000423 1 445 6.7E-204 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 Pfam PF00696 Amino acid kinase family 25 270 8.7E-28 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 SUPERFAMILY SSF53633 4 294 1.13E-66 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 SUPERFAMILY SSF55729 300 425 6.73E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 9.7E-202 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.598 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 Gene3D G3DSA:3.40.1160.10 6 297 2.8E-56 T 29-03-2018 AL539_RS08075 3d6dbd34f433b3fea8bb0a646d95f107 445 Pfam PF00583 Acetyltransferase (GNAT) family 333 416 4.2E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 Gene3D G3DSA:3.30.390.10 1 110 4.9E-17 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 1.5E-108 T 29-03-2018 AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 Gene3D G3DSA:3.20.20.120 111 300 7.3E-32 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 SUPERFAMILY SSF54826 1 100 4.24E-26 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 323 22.869 T 29-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 SMART SM00922 116 213 4.7E-7 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 SUPERFAMILY SSF51604 106 321 1.7E-46 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS17205 e240e6e69751de0ce86e54395b06d9f8 329 Pfam PF13378 Enolase C-terminal domain-like 125 277 9.0E-12 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS12445 1526cabe33e4a3c250e71772540fa9a5 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 9.0E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS12445 1526cabe33e4a3c250e71772540fa9a5 137 SUPERFAMILY SSF46626 60 134 8.01E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS12445 1526cabe33e4a3c250e71772540fa9a5 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 2.6E-14 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL539_RS12445 1526cabe33e4a3c250e71772540fa9a5 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 2.6E-14 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL539_RS12445 1526cabe33e4a3c250e71772540fa9a5 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 2.6E-14 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL539_RS12445 1526cabe33e4a3c250e71772540fa9a5 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 2.6E-14 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL539_RS12445 1526cabe33e4a3c250e71772540fa9a5 137 Gene3D G3DSA:1.10.760.10 58 134 9.9E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 SUPERFAMILY SSF53927 152 284 1.1E-36 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 Gene3D G3DSA:3.40.140.10 181 290 2.4E-15 T 29-03-2018 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 Gene3D G3DSA:3.40.140.10 41 171 8.9E-28 T 29-03-2018 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 293 5.8E-99 T 29-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 1.3E-11 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 PIRSF PIRSF006334 14 295 2.4E-108 T 29-03-2018 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 SUPERFAMILY SSF53927 1 147 1.39E-40 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.756 T 29-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL539_RS02355 fae1e19d0d6061c8213194859a172800 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 3.9E-41 T 29-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 Gene3D G3DSA:3.30.450.20 8 150 1.1E-22 T 29-03-2018 AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00086 95 135 0.0015 T 29-03-2018 IPR001610 PAC motif AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 Pfam PF08447 PAS fold 45 115 6.9E-12 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 Gene3D G3DSA:3.20.20.450 311 563 1.4E-78 T 29-03-2018 IPR001633 EAL domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 2.0E-12 T 29-03-2018 IPR000014 PAS domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00091 22 88 0.0087 T 29-03-2018 IPR000014 PAS domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00267 135 304 1.1E-7 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00052 314 560 5.6E-68 T 29-03-2018 IPR001633 EAL domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 SUPERFAMILY SSF141868 319 562 4.58E-74 T 29-03-2018 IPR001633 EAL domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 4.5E-14 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 SUPERFAMILY SSF55785 27 137 2.79E-17 T 29-03-2018 IPR000014 PAS domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 SUPERFAMILY SSF55073 153 306 1.33E-18 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 Pfam PF00563 EAL domain 322 555 1.0E-65 T 29-03-2018 IPR001633 EAL domain AL539_RS03105 37d2377770dd61cf5e543c0a9d5c62c8 567 Gene3D G3DSA:3.30.70.270 151 310 2.7E-25 T 29-03-2018 AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.9E-33 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 6.9E-33 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 6.9E-33 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-33 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.9E-33 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.9E-33 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.9E-52 T 29-03-2018 AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 SUPERFAMILY SSF51735 7 250 1.94E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.7E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.7E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.7E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0023 T 29-03-2018 AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 Gene3D G3DSA:3.40.50.720 1 48 9.0E-7 T 29-03-2018 AL539_RS25750 2a7b3dd86b49637f24e8dc9f16895a90 252 Gene3D G3DSA:3.40.50.720 49 252 5.2E-55 T 29-03-2018 AL539_RS22025 69e482002a05f443898d6dc68c7cac8d 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 306 425 2.1E-30 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS22025 69e482002a05f443898d6dc68c7cac8d 455 PIRSF PIRSF037714 1 450 1.2E-153 T 29-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF53098 332 517 1.01E-53 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF01612 3'-5' exonuclease 329 513 3.2E-36 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:1.10.150.20 181 250 2.9E-24 T 29-03-2018 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00475 7 267 2.8E-123 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF56672 522 928 2.0E-160 T 29-03-2018 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 2.3E-287 T 29-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00482 685 892 5.9E-117 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF47807 171 291 5.53E-30 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.6E-28 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00474 329 516 1.4E-37 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:3.40.50.1010 7 180 2.1E-68 T 29-03-2018 IPR029060 PIN domain-like AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 692 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 699 722 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 812 823 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 654 676 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 729 742 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 801 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 844 860 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 778 5.1E-78 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:3.30.420.10 319 541 9.3E-48 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:1.20.1060.10 542 655 1.8E-36 T 29-03-2018 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF00476 DNA polymerase family A 550 925 1.1E-157 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:3.30.70.370 753 928 3.8E-50 T 29-03-2018 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:3.30.70.370 656 751 4.3E-18 T 29-03-2018 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 ProSitePatterns PS00447 DNA polymerase family A signature. 753 772 - T 29-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 6.5E-54 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF88723 7 170 1.4E-57 T 29-03-2018 IPR029060 PIN domain-like AL539_RS12765 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00279 173 208 1.2E-13 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL539_RS04440 905a12d347613b8236b176a1286639cc 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 3.7E-31 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS04440 905a12d347613b8236b176a1286639cc 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 3.7E-31 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS04440 905a12d347613b8236b176a1286639cc 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 3.7E-31 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS04440 905a12d347613b8236b176a1286639cc 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 3.7E-31 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS04440 905a12d347613b8236b176a1286639cc 261 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 253 3.3E-81 T 29-03-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 AL539_RS04440 905a12d347613b8236b176a1286639cc 261 Pfam PF01311 Bacterial export proteins, family 1 12 246 1.3E-56 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS21390 e3e7010148af5d23a3cbe0252af41618 116 Gene3D G3DSA:3.40.250.10 17 116 4.5E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS21390 e3e7010148af5d23a3cbe0252af41618 116 SUPERFAMILY SSF52821 27 114 4.45E-26 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS21390 e3e7010148af5d23a3cbe0252af41618 116 Pfam PF00581 Rhodanese-like domain 29 113 1.4E-15 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS21390 e3e7010148af5d23a3cbe0252af41618 116 SMART SM00450 25 116 2.9E-21 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS17890 7f8dc1bda8014bd4d71737cf766b2fc3 264 Gene3D G3DSA:3.60.40.10 4 238 3.7E-39 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS17890 7f8dc1bda8014bd4d71737cf766b2fc3 264 Pfam PF13672 Protein phosphatase 2C 19 211 8.2E-22 T 29-03-2018 AL539_RS17890 7f8dc1bda8014bd4d71737cf766b2fc3 264 SMART SM00332 1 235 2.3E-18 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS17890 7f8dc1bda8014bd4d71737cf766b2fc3 264 SMART SM00331 11 237 7.8E-23 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS17890 7f8dc1bda8014bd4d71737cf766b2fc3 264 SUPERFAMILY SSF81606 8 237 8.76E-61 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Pfam PF02225 PA domain 376 465 1.3E-6 T 29-03-2018 IPR003137 PA domain AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Pfam PF00082 Subtilase family 146 333 6.1E-28 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Pfam PF00082 Subtilase family 478 538 9.7E-14 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 7.1E-16 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 7.1E-16 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 7.1E-16 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Pfam PF05922 Peptidase inhibitor I9 43 120 2.9E-4 T 29-03-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Gene3D G3DSA:3.40.50.200 124 553 5.0E-79 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 SUPERFAMILY SSF49785 568 675 3.49E-21 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Gene3D G3DSA:3.30.70.80 35 123 4.0E-7 T 29-03-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 SUPERFAMILY SSF52743 123 546 4.8E-104 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Pfam PF01483 Proprotein convertase P-domain 596 675 4.9E-22 T 29-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 AL539_RS21615 11defb6fe1b71e451c7cb1f8a3045261 676 Gene3D G3DSA:2.60.120.260 560 676 8.9E-24 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS13400 66856e0b99d0a37e92c02876fd6de11c 537 Pfam PF01609 Transposase DDE domain 163 459 1.5E-10 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL539_RS13400 66856e0b99d0a37e92c02876fd6de11c 537 SUPERFAMILY SSF53098 393 496 5.01E-6 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS13400 66856e0b99d0a37e92c02876fd6de11c 537 Gene3D G3DSA:3.90.350.10 104 439 6.8E-28 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AL539_RS13400 66856e0b99d0a37e92c02876fd6de11c 537 Pfam PF14104 Domain of unknown function (DUF4277) 8 113 1.0E-39 T 29-03-2018 IPR025457 Domain of unknown function DUF4277 AL539_RS18995 66856e0b99d0a37e92c02876fd6de11c 537 Pfam PF01609 Transposase DDE domain 163 459 1.5E-10 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL539_RS18995 66856e0b99d0a37e92c02876fd6de11c 537 SUPERFAMILY SSF53098 393 496 5.01E-6 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS18995 66856e0b99d0a37e92c02876fd6de11c 537 Gene3D G3DSA:3.90.350.10 104 439 6.8E-28 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AL539_RS18995 66856e0b99d0a37e92c02876fd6de11c 537 Pfam PF14104 Domain of unknown function (DUF4277) 8 113 1.0E-39 T 29-03-2018 IPR025457 Domain of unknown function DUF4277 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 PIRSF PIRSF000850 332 439 0.0099 T 29-03-2018 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 PIRSF PIRSF000850 141 182 17.0 T 29-03-2018 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 PIRSF PIRSF000850 31 107 0.49 T 29-03-2018 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 SMART SM00155 152 179 0.51 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 SMART SM00155 378 405 9.0E-7 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 Pfam PF13091 PLD-like domain 294 429 3.0E-13 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 Pfam PF13091 PLD-like domain 60 211 2.3E-14 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 Gene3D G3DSA:3.30.870.10 29 222 1.1E-27 T 29-03-2018 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 SUPERFAMILY SSF56024 286 435 7.4E-20 T 29-03-2018 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 SUPERFAMILY SSF56024 40 220 9.22E-35 T 29-03-2018 AL539_RS04705 3aae36f6cdfbe2d8ec6c97a9200a7ef2 483 Gene3D G3DSA:3.30.870.10 257 443 2.6E-17 T 29-03-2018 AL539_RS25820 5a8eb5ef71f5877afa3d0ef1c8ec5157 125 Gene3D G3DSA:3.10.450.50 2 125 3.1E-22 T 29-03-2018 AL539_RS25820 5a8eb5ef71f5877afa3d0ef1c8ec5157 125 Pfam PF12680 SnoaL-like domain 12 107 7.8E-15 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL539_RS25820 5a8eb5ef71f5877afa3d0ef1c8ec5157 125 SUPERFAMILY SSF54427 4 115 5.33E-26 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS26065 d07874aa19fbba8e7988ceaa77996c86 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 4.2E-33 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL539_RS26065 d07874aa19fbba8e7988ceaa77996c86 111 SUPERFAMILY SSF50022 5 106 1.9E-33 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS26065 d07874aa19fbba8e7988ceaa77996c86 111 Gene3D G3DSA:2.102.10.10 4 111 2.5E-17 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS26065 d07874aa19fbba8e7988ceaa77996c86 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 5 106 5.1E-34 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 29-03-2018 IPR033135 ClpP, histidine active site AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 6.8E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 6.8E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 6.8E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 6.8E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 6.8E-54 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.387 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 5.2E-107 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 Pfam PF00574 Clp protease 25 205 2.4E-89 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 SUPERFAMILY SSF52096 23 206 3.63E-75 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 Gene3D G3DSA:3.90.226.10 15 207 8.0E-48 T 29-03-2018 AL539_RS17130 b52bc18512aab65c8a8a1e2ea15e4227 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 29-03-2018 IPR018215 ClpP, Ser active site AL539_RS24635 5a14ba82c3f7420496d1ff24111797b5 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 197 2.4E-24 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL539_RS24635 5a14ba82c3f7420496d1ff24111797b5 319 Gene3D G3DSA:3.90.25.10 181 283 2.1E-33 T 29-03-2018 AL539_RS24635 5a14ba82c3f7420496d1ff24111797b5 319 Gene3D G3DSA:3.40.50.720 2 180 6.2E-27 T 29-03-2018 AL539_RS24635 5a14ba82c3f7420496d1ff24111797b5 319 SUPERFAMILY SSF51735 2 311 2.25E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.1E-170 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 SMART SM00937 67 180 2.3E-68 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.659 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 Pfam PF03462 PCRF domain 13 205 3.1E-77 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 Pfam PF00472 RF-1 domain 218 323 9.9E-39 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 SUPERFAMILY SSF75620 12 355 2.62E-137 T 29-03-2018 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 Gene3D G3DSA:3.30.160.20 211 293 3.5E-32 T 29-03-2018 AL539_RS16295 a0afc23df98ee1f9b2aa01f36537a4a4 362 Gene3D G3DSA:1.20.58.410 2 96 1.4E-22 T 29-03-2018 AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 Gene3D G3DSA:2.30.30.30 110 164 8.6E-7 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 SUPERFAMILY SSF82679 1 101 3.01E-29 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 3.3E-61 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.204 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 Gene3D G3DSA:3.30.70.940 1 105 5.8E-21 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 Pfam PF02357 Transcription termination factor nusG 2 95 1.0E-19 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 SUPERFAMILY SSF50104 115 163 2.11E-5 T 29-03-2018 IPR008991 Translation protein SH3-like domain AL539_RS16680 a3f3c8c1bad99111bdb0e4c245fa62b2 166 SMART SM00738 1 101 5.7E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS06815 82685587e772a822bd230fe1df4865cb 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 5.1E-163 T 29-03-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AL539_RS06815 82685587e772a822bd230fe1df4865cb 477 Pfam PF03553 Na+/H+ antiporter family 161 453 3.6E-66 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL539_RS16695 27a4d570e5bb743ed5e5d25c6d3395bb 404 Gene3D G3DSA:3.30.420.40 203 400 1.5E-46 T 29-03-2018 AL539_RS16695 27a4d570e5bb743ed5e5d25c6d3395bb 404 SUPERFAMILY SSF53067 85 391 2.97E-55 T 29-03-2018 AL539_RS16695 27a4d570e5bb743ed5e5d25c6d3395bb 404 Gene3D G3DSA:1.10.10.10 14 78 1.6E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16695 27a4d570e5bb743ed5e5d25c6d3395bb 404 Gene3D G3DSA:3.30.420.40 79 202 9.7E-22 T 29-03-2018 AL539_RS16695 27a4d570e5bb743ed5e5d25c6d3395bb 404 Pfam PF00480 ROK family 86 390 2.8E-74 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL539_RS16695 27a4d570e5bb743ed5e5d25c6d3395bb 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL539_RS16695 27a4d570e5bb743ed5e5d25c6d3395bb 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13605 e4318056a94dd77234c2a3881dd8072a 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.638 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13605 e4318056a94dd77234c2a3881dd8072a 117 SUPERFAMILY SSF53137 3 115 3.49E-51 T 29-03-2018 AL539_RS13605 e4318056a94dd77234c2a3881dd8072a 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 9.3E-44 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13605 e4318056a94dd77234c2a3881dd8072a 117 Gene3D G3DSA:3.30.420.100 1 117 1.4E-36 T 29-03-2018 AL539_RS13605 e4318056a94dd77234c2a3881dd8072a 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.9E-43 T 29-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-29 T 29-03-2018 AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SUPERFAMILY SSF47060 3 89 1.21E-34 T 29-03-2018 IPR009068 S15/NS1, RNA-binding AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SMART SM01387 8 88 4.4E-52 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-36 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 9.4E-39 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08390 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Gene3D G3DSA:1.10.287.10 2 89 1.2E-34 T 29-03-2018 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 PIRSF PIRSF000157 1 935 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 2.0E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 Gene3D G3DSA:3.40.50.970 590 799 1.1E-58 T 29-03-2018 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 Gene3D G3DSA:3.40.50.970 168 524 9.5E-90 T 29-03-2018 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 Gene3D G3DSA:1.10.287.1150 84 167 4.0E-25 T 29-03-2018 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 SMART SM00861 594 787 2.0E-64 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.1E-13 T 29-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 Pfam PF00676 Dehydrogenase E1 component 221 514 6.5E-49 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 SUPERFAMILY SSF52518 122 532 2.55E-88 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 2.1E-54 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL539_RS16790 70000183e2eafdcdc494b9e5ea198890 941 SUPERFAMILY SSF52518 577 793 2.61E-53 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS00855 3a9be56cf45f1c4dcf1b03300b6d489e 357 SUPERFAMILY SSF57783 18 102 4.68E-8 T 29-03-2018 AL539_RS00855 3a9be56cf45f1c4dcf1b03300b6d489e 357 Pfam PF08273 Zinc-binding domain of primase-helicase 37 75 3.2E-14 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AL539_RS00855 3a9be56cf45f1c4dcf1b03300b6d489e 357 Pfam PF13362 Toprim domain 251 349 1.3E-16 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS00855 3a9be56cf45f1c4dcf1b03300b6d489e 357 SMART SM00778 37 75 5.2E-15 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AL539_RS00855 3a9be56cf45f1c4dcf1b03300b6d489e 357 Gene3D G3DSA:3.40.1360.10 242 356 1.1E-7 T 29-03-2018 AL539_RS00855 3a9be56cf45f1c4dcf1b03300b6d489e 357 Gene3D G3DSA:3.90.580.10 9 106 3.5E-10 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 Gene3D G3DSA:1.10.10.60 397 441 6.7E-14 T 29-03-2018 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 Pfam PF00072 Response regulator receiver domain 4 114 1.9E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 Gene3D G3DSA:3.40.50.300 140 316 4.9E-25 T 29-03-2018 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 SUPERFAMILY SSF46689 391 440 9.32E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 SMART SM00382 164 307 1.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 SUPERFAMILY SSF52540 144 373 5.62E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 Pfam PF00158 Sigma-54 interaction domain 144 310 2.8E-68 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 SUPERFAMILY SSF52172 2 188 2.28E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 2.6E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 SMART SM00448 2 114 7.8E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 Gene3D G3DSA:1.10.8.60 317 396 4.2E-24 T 29-03-2018 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 Gene3D G3DSA:3.40.50.2300 1 136 4.8E-26 T 29-03-2018 AL539_RS17110 80f10cb8b3dca5c0507a89f03019875c 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS02580 7a15a24062bfb1d3ba26187bc8b309fe 345 Gene3D G3DSA:3.90.850.10 34 328 1.7E-51 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL539_RS02580 7a15a24062bfb1d3ba26187bc8b309fe 345 SUPERFAMILY SSF56529 83 339 6.8E-56 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL539_RS02580 7a15a24062bfb1d3ba26187bc8b309fe 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 6.7E-39 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 SMART SM00267 265 442 3.6E-30 T 29-03-2018 IPR000160 GGDEF domain AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 SMART SM00052 452 699 1.7E-105 T 29-03-2018 IPR001633 EAL domain AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 Gene3D G3DSA:3.30.450.20 43 176 9.1E-4 T 29-03-2018 AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 SUPERFAMILY SSF55073 281 444 5.57E-33 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 440 6.5E-29 T 29-03-2018 IPR000160 GGDEF domain AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 436 1.1E-32 T 29-03-2018 IPR000160 GGDEF domain AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 Gene3D G3DSA:3.30.70.270 270 449 2.9E-44 T 29-03-2018 AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 Pfam PF00563 EAL domain 458 694 1.6E-73 T 29-03-2018 IPR001633 EAL domain AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 SUPERFAMILY SSF141868 467 706 1.06E-83 T 29-03-2018 IPR001633 EAL domain AL539_RS02855 cb28b7424aa5b41f2357c8558a8470af 718 Gene3D G3DSA:3.20.20.450 450 710 2.5E-93 T 29-03-2018 IPR001633 EAL domain AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 Gene3D G3DSA:1.25.40.10 25 160 2.5E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 SUPERFAMILY SSF48452 288 386 1.52E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 Gene3D G3DSA:1.25.40.10 360 391 0.015 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 Pfam PF13181 Tetratricopeptide repeat 151 181 0.0091 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 SMART SM00028 74 107 8.8 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 SMART SM00028 360 392 180.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 SMART SM00028 151 184 1.7 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 SUPERFAMILY SSF48452 74 249 7.97E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 Gene3D G3DSA:1.25.40.10 161 195 0.0014 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS13040 686074b99222b172799a9a802d5f8ca9 407 Gene3D G3DSA:1.25.40.10 196 359 4.7E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS25095 80eab469b4f497ee1e3475541c6da31a 210 Gene3D G3DSA:3.40.30.10 29 208 5.4E-16 T 29-03-2018 AL539_RS25095 80eab469b4f497ee1e3475541c6da31a 210 Pfam PF13462 Thioredoxin 53 200 5.8E-7 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS25095 80eab469b4f497ee1e3475541c6da31a 210 SUPERFAMILY SSF52833 27 207 7.85E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS23240 4901c290f491db270731a7d56635c871 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 1.7E-65 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.2E-12 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.2E-12 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.2E-12 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.2E-12 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.2E-12 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 SUPERFAMILY SSF118215 15 400 1.7E-97 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 Gene3D G3DSA:1.10.3860.10 4 405 4.1E-74 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23240 4901c290f491db270731a7d56635c871 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.581 T 29-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 4.9E-113 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 Pfam PF00571 CBS domain 211 258 1.1E-4 T 29-03-2018 IPR000644 CBS domain AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 Pfam PF00571 CBS domain 268 320 5.1E-7 T 29-03-2018 IPR000644 CBS domain AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 Gene3D G3DSA:3.40.50.10490 1 198 6.1E-57 T 29-03-2018 AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 SMART SM00116 275 322 2.7 T 29-03-2018 IPR000644 CBS domain AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 SMART SM00116 210 258 0.72 T 29-03-2018 IPR000644 CBS domain AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 Gene3D G3DSA:3.10.580.10 199 322 1.1E-19 T 29-03-2018 AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 PIRSF PIRSF004692 1 323 2.4E-132 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 SUPERFAMILY SSF53697 11 286 1.29E-68 T 29-03-2018 AL539_RS09920 811a4b65cb0ea33ca23125584e37f26d 323 Pfam PF01380 SIS domain 41 172 4.8E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 SUPERFAMILY SSF56024 273 469 2.11E-48 T 29-03-2018 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 7.6E-7 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 50.059 T 29-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 Gene3D G3DSA:3.30.870.10 108 288 1.3E-31 T 29-03-2018 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 Pfam PF13091 PLD-like domain 134 268 1.5E-16 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 Pfam PF13091 PLD-like domain 327 444 1.6E-24 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 SMART SM00155 219 246 4.0E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 SMART SM00155 397 424 9.5E-7 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 7.9E-157 T 29-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 SUPERFAMILY SSF56024 70 313 1.82E-51 T 29-03-2018 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 PIRSF PIRSF000850 102 253 2.6 T 29-03-2018 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 PIRSF PIRSF000850 385 482 0.059 T 29-03-2018 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 PIRSF PIRSF000850 297 377 0.079 T 29-03-2018 AL539_RS01845 ff280bf5c0dd014f1de60e0988650ce4 484 Gene3D G3DSA:3.30.870.10 315 469 6.3E-26 T 29-03-2018 AL539_RS23245 e1d29327f48ed073dc5503d18c6e3528 358 Gene3D G3DSA:1.10.40.50 267 333 3.7E-19 T 29-03-2018 AL539_RS23245 e1d29327f48ed073dc5503d18c6e3528 358 Pfam PF03193 RsgA GTPase 91 263 1.3E-49 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL539_RS23245 e1d29327f48ed073dc5503d18c6e3528 358 Gene3D G3DSA:3.40.50.300 103 263 6.4E-23 T 29-03-2018 AL539_RS23245 e1d29327f48ed073dc5503d18c6e3528 358 SUPERFAMILY SSF52540 107 324 6.68E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23245 e1d29327f48ed073dc5503d18c6e3528 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 320 8.2E-51 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL539_RS23245 e1d29327f48ed073dc5503d18c6e3528 358 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 327 31.476 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 2.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 2.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 SMART SM00342 182 264 3.5E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 Gene3D G3DSA:1.10.10.60 145 224 8.6E-13 T 29-03-2018 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 SUPERFAMILY SSF46689 218 264 1.12E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 Gene3D G3DSA:2.60.120.10 5 85 3.2E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 Pfam PF02311 AraC-like ligand binding domain 15 133 1.1E-20 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 SUPERFAMILY SSF51215 23 133 1.23E-17 T 29-03-2018 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 SUPERFAMILY SSF46689 167 215 2.33E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 Pfam PF12833 Helix-turn-helix domain 192 264 1.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS11725 8c0caa77b2ffa241aedb34d64c7725d1 265 Gene3D G3DSA:1.10.10.60 226 265 4.7E-9 T 29-03-2018 AL539_RS04505 26bcc858a0ee75f0f158b89e65773351 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 1.9E-28 T 29-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AL539_RS04505 26bcc858a0ee75f0f158b89e65773351 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 29-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AL539_RS23110 ec5e7419acddbaab9573598fc3995dd8 331 Pfam PF07366 SnoaL-like polyketide cyclase 7 137 1.0E-8 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL539_RS23110 ec5e7419acddbaab9573598fc3995dd8 331 Pfam PF07366 SnoaL-like polyketide cyclase 198 313 1.7E-13 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL539_RS23110 ec5e7419acddbaab9573598fc3995dd8 331 SUPERFAMILY SSF54427 175 321 1.12E-27 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS23110 ec5e7419acddbaab9573598fc3995dd8 331 SUPERFAMILY SSF54427 5 147 2.06E-19 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS23110 ec5e7419acddbaab9573598fc3995dd8 331 Gene3D G3DSA:3.10.450.50 160 316 4.0E-20 T 29-03-2018 AL539_RS23110 ec5e7419acddbaab9573598fc3995dd8 331 Gene3D G3DSA:3.10.450.50 3 141 8.8E-11 T 29-03-2018 AL539_RS08340 e4c60a272e5e5a83b724e39c9d7e0c64 167 Gene3D G3DSA:3.40.630.30 1 157 4.7E-18 T 29-03-2018 AL539_RS08340 e4c60a272e5e5a83b724e39c9d7e0c64 167 SUPERFAMILY SSF55729 1 130 9.12E-28 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS08340 e4c60a272e5e5a83b724e39c9d7e0c64 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 8.9E-10 T 29-03-2018 AL539_RS15295 3187993a4be4fc189d6edde9ca3a4a72 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AL539_RS15295 3187993a4be4fc189d6edde9ca3a4a72 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.8E-66 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL539_RS15295 3187993a4be4fc189d6edde9ca3a4a72 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.3E-47 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AL539_RS15295 3187993a4be4fc189d6edde9ca3a4a72 168 Pfam PF02082 Transcriptional regulator 1 83 8.1E-28 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AL539_RS15295 3187993a4be4fc189d6edde9ca3a4a72 168 SUPERFAMILY SSF46785 2 133 2.43E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15295 3187993a4be4fc189d6edde9ca3a4a72 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.574 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL539_RS15295 3187993a4be4fc189d6edde9ca3a4a72 168 Gene3D G3DSA:1.10.10.10 1 140 4.5E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17425 afcb176686d9639607264404371b61f7 405 Pfam PF02687 FtsX-like permease family 299 398 3.4E-11 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS17425 afcb176686d9639607264404371b61f7 405 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 7 405 1.2E-134 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL539_RS17425 afcb176686d9639607264404371b61f7 405 Pfam PF12704 MacB-like periplasmic core domain 32 212 5.9E-14 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Gene3D G3DSA:3.30.565.10 856 1000 5.4E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 SUPERFAMILY SSF46689 1077 1122 3.18E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1092 1107 5.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1107 1123 5.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 SMART SM00342 1041 1123 7.8E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Gene3D G3DSA:2.130.10.10 288 374 5.4E-8 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Gene3D G3DSA:2.130.10.10 377 521 1.2E-9 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Gene3D G3DSA:2.130.10.10 49 287 7.2E-4 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Gene3D G3DSA:2.130.10.10 522 693 0.18 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Gene3D G3DSA:1.10.10.60 1022 1076 2.7E-7 T 29-03-2018 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Gene3D G3DSA:1.10.10.60 1077 1131 5.7E-10 T 29-03-2018 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1078 1119 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 Pfam PF12833 Helix-turn-helix domain 1048 1122 6.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS16825 7800d9cf529b9fce67cf381dff0a02fc 1132 SUPERFAMILY SSF63829 256 446 3.01E-13 T 29-03-2018 AL539_RS04095 99f30efb6c4abd13e1a21cec8e1397c8 204 SUPERFAMILY SSF103088 55 182 1.1E-28 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS04095 99f30efb6c4abd13e1a21cec8e1397c8 204 Gene3D G3DSA:4.10.1080.10 15 94 7.4E-6 T 29-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL539_RS04095 99f30efb6c4abd13e1a21cec8e1397c8 204 Gene3D G3DSA:3.30.1330.60 95 201 2.1E-28 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS04095 99f30efb6c4abd13e1a21cec8e1397c8 204 Pfam PF00691 OmpA family 83 178 1.1E-17 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS04095 99f30efb6c4abd13e1a21cec8e1397c8 204 PRINTS PR01021 OMPA domain signature 114 129 5.9E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS04095 99f30efb6c4abd13e1a21cec8e1397c8 204 PRINTS PR01021 OMPA domain signature 84 106 5.9E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS04095 99f30efb6c4abd13e1a21cec8e1397c8 204 PRINTS PR01021 OMPA domain signature 129 145 5.9E-7 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 9.9E-60 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 Gene3D G3DSA:3.40.50.1220 200 356 1.1E-51 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 Gene3D G3DSA:3.40.50.970 357 565 2.0E-49 T 29-03-2018 AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 1.4E-46 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 SUPERFAMILY SSF52518 373 567 9.13E-68 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 Gene3D G3DSA:3.40.50.970 1 199 9.7E-65 T 29-03-2018 AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 SUPERFAMILY SSF52518 2 181 4.12E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 3.9E-272 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 2.4E-50 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 SUPERFAMILY SSF52467 191 364 1.56E-63 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS14045 d2a00dc6b828bc38a822c0d3a02df90b 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL539_RS25245 e7978632ebf17eb710d7489b28501497 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 5.4E-32 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL539_RS25245 e7978632ebf17eb710d7489b28501497 112 SUPERFAMILY SSF55248 16 109 4.32E-34 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL539_RS25245 e7978632ebf17eb710d7489b28501497 112 Gene3D G3DSA:3.30.1360.20 8 112 1.2E-31 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL539_RS25245 e7978632ebf17eb710d7489b28501497 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.982 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 Gene3D G3DSA:3.30.70.270 350 518 1.2E-57 T 29-03-2018 AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 SMART SM00267 338 510 2.9E-58 T 29-03-2018 IPR000160 GGDEF domain AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 Gene3D G3DSA:3.20.20.450 519 774 2.1E-94 T 29-03-2018 IPR001633 EAL domain AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 SMART SM00052 520 765 5.9E-105 T 29-03-2018 IPR001633 EAL domain AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 SUPERFAMILY SSF141868 525 773 2.88E-84 T 29-03-2018 IPR001633 EAL domain AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 505 1.5E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 506 1.0E-40 T 29-03-2018 IPR000160 GGDEF domain AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 Pfam PF00563 EAL domain 526 760 1.0E-68 T 29-03-2018 IPR001633 EAL domain AL539_RS23840 bdca3b4f0ec3d0eaf98d2b1edcc8972b 776 SUPERFAMILY SSF55073 354 512 5.34E-51 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 Gene3D G3DSA:3.30.70.270 334 513 6.9E-48 T 29-03-2018 AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 7.2E-31 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 Gene3D G3DSA:3.20.20.450 514 773 1.5E-71 T 29-03-2018 IPR001633 EAL domain AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 SMART SM00267 329 506 2.0E-41 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 Pfam PF00563 EAL domain 522 754 3.4E-60 T 29-03-2018 IPR001633 EAL domain AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 3.7E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 SUPERFAMILY SSF55073 345 507 4.0E-37 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 SMART SM00052 516 759 4.3E-61 T 29-03-2018 IPR001633 EAL domain AL539_RS19480 75f65a8b33aa5aa74462db235ef36b6d 786 SUPERFAMILY SSF141868 521 766 1.28E-66 T 29-03-2018 IPR001633 EAL domain AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 Pfam PF02803 Thiolase, C-terminal domain 267 400 8.9E-35 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 PIRSF PIRSF000429 1 402 1.6E-103 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 Gene3D G3DSA:3.40.47.10 264 399 1.4E-26 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 SUPERFAMILY SSF53901 4 267 2.11E-73 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 Gene3D G3DSA:3.40.47.10 2 263 5.2E-52 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 SUPERFAMILY SSF53901 268 400 3.84E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 Pfam PF00108 Thiolase, N-terminal domain 6 260 1.5E-80 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL539_RS25720 5653bfc2b167931ffada1b08de3f8ffe 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 2.7E-118 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 Gene3D G3DSA:3.30.230.10 11 166 1.7E-42 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 SUPERFAMILY SSF54211 11 163 1.21E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 PIRSF PIRSF010376 9 285 8.0E-85 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 Gene3D G3DSA:3.30.70.890 167 285 1.2E-24 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 30.826 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 Pfam PF08544 GHMP kinases C terminal 209 265 1.5E-6 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 SUPERFAMILY SSF55060 167 282 2.3E-34 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 284 4.5E-92 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL539_RS16280 7c9da93c70ce86296a6de7110621e848 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 5.1E-9 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 Gene3D G3DSA:3.40.190.10 181 264 3.1E-21 T 29-03-2018 AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 Gene3D G3DSA:1.10.10.10 1 87 8.3E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 Pfam PF03466 LysR substrate binding domain 92 293 1.9E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 Gene3D G3DSA:3.40.190.10 92 180 6.1E-11 T 29-03-2018 AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 SUPERFAMILY SSF46785 6 86 1.14E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 6.2E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19900 b014e996252c6bfc11ce16e0e6c5c272 302 SUPERFAMILY SSF53850 92 298 1.37E-41 T 29-03-2018 AL539_RS24390 975e02c8841d919252875b02027485ea 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 3.8E-60 T 29-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AL539_RS24390 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:1.10.3720.10 280 521 1.7E-40 T 29-03-2018 AL539_RS24390 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:1.20.58.370 16 105 3.2E-24 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AL539_RS24390 975e02c8841d919252875b02027485ea 524 SUPERFAMILY SSF161098 273 514 2.88E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24390 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:3.10.650.10 206 278 1.2E-26 T 29-03-2018 AL539_RS24390 975e02c8841d919252875b02027485ea 524 SUPERFAMILY SSF160964 24 270 1.7E-83 T 29-03-2018 AL539_RS24390 975e02c8841d919252875b02027485ea 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 513 1.9E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24390 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:2.40.430.10 129 205 8.3E-25 T 29-03-2018 AL539_RS25630 17c3a55154608f009716d93ad96e33fd 337 SUPERFAMILY SSF52540 11 207 4.88E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25630 17c3a55154608f009716d93ad96e33fd 337 Gene3D G3DSA:3.40.50.300 8 211 9.2E-27 T 29-03-2018 AL539_RS25630 17c3a55154608f009716d93ad96e33fd 337 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 186 5.5E-41 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL539_RS03565 b4f4fba01c9efbdb4557a3f0a5e21985 67 PIRSF PIRSF036704 1 67 2.8E-35 T 29-03-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL539_RS03565 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 67 6.8E-33 T 29-03-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL539_RS03565 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 3.9E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 215.323 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 PIRSF PIRSF000524 1 365 3.4E-58 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 Pfam PF00266 Aminotransferase class-V 36 313 4.5E-31 T 29-03-2018 IPR000192 Aminotransferase class V domain AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 SUPERFAMILY SSF53383 3 362 2.62E-89 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 Gene3D G3DSA:3.90.1150.10 255 365 2.0E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 Gene3D G3DSA:3.40.640.10 16 254 1.3E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 3.2E-202 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL539_RS21595 297cb531f979e77897613f7578c8fe30 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 9.3E-171 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL539_RS06695 f2ec17442c762b2f51622e73c67ca2b6 192 PIRSF PIRSF006102 1 192 1.2E-64 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS06695 f2ec17442c762b2f51622e73c67ca2b6 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.5E-61 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS06695 f2ec17442c762b2f51622e73c67ca2b6 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.24 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AL539_RS06695 f2ec17442c762b2f51622e73c67ca2b6 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 267 321 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 Gene3D G3DSA:1.20.210.10 35 543 6.1E-219 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 39 541 4.3E-213 T 29-03-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 47 489 5.2E-151 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 SUPERFAMILY SSF81442 34 542 2.09E-193 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 326 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 155 167 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 370 388 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 417 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 214 233 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 286 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 85 108 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 335 356 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 38 63 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 203 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25050 493c05a1b6285351a6fd63986fcdd144 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 448 469 2.6E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 Pfam PF01752 Collagenase 317 600 1.3E-106 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 Pfam PF08453 Peptidase family M9 N-terminal 78 258 5.1E-53 T 29-03-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 9.7E-36 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 9.7E-36 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 9.7E-36 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 9.7E-36 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 9.7E-36 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 SUPERFAMILY SSF49299 607 690 5.23E-20 T 29-03-2018 IPR000601 PKD domain AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 SMART SM00089 611 693 5.6E-25 T 29-03-2018 IPR022409 PKD/Chitinase domain AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 Pfam PF00801 PKD domain 619 682 1.9E-11 T 29-03-2018 IPR000601 PKD domain AL539_RS02530 f1231b702a8e4c95b10f81bcdc0e78dc 814 Gene3D G3DSA:2.60.40.10 601 692 9.8E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 1.7E-243 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 Gene3D G3DSA:1.10.8.60 336 415 1.5E-23 T 29-03-2018 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 Pfam PF06480 FtsH Extracellular 8 97 1.0E-11 T 29-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 SUPERFAMILY SSF52540 147 395 9.3E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 Gene3D G3DSA:3.40.50.300 132 335 8.0E-63 T 29-03-2018 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 29-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 5.2E-46 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 SUPERFAMILY SSF140990 406 600 8.89E-76 T 29-03-2018 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 613 37.373 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 SMART SM00382 188 327 5.1E-26 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08450 05a12b3edf8638b8818ff4e87540ea0f 660 Pfam PF01434 Peptidase family M41 386 595 5.3E-82 T 29-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AL539_RS12210 a58bf5f2200f17be947b49939a5b4848 144 Gene3D G3DSA:3.40.50.360 1 144 2.5E-26 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS12210 a58bf5f2200f17be947b49939a5b4848 144 Pfam PF00258 Flavodoxin 4 136 3.1E-21 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL539_RS12210 a58bf5f2200f17be947b49939a5b4848 144 SUPERFAMILY SSF52218 2 142 3.35E-38 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS22535 9bafb07a3ae7219a85767bfdc0c24112 285 Gene3D G3DSA:3.40.50.300 1 267 7.1E-44 T 29-03-2018 AL539_RS22535 9bafb07a3ae7219a85767bfdc0c24112 285 SMART SM00382 30 208 2.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS22535 9bafb07a3ae7219a85767bfdc0c24112 285 Pfam PF00005 ABC transporter 21 158 7.2E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS22535 9bafb07a3ae7219a85767bfdc0c24112 285 SUPERFAMILY SSF52540 4 222 9.82E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 SUPERFAMILY SSF158472 178 225 1.23E-7 T 29-03-2018 AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 SMART SM00304 176 228 2.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 4.1E-21 T 29-03-2018 IPR029095 NarX-like, N-terminal AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 PIRSF PIRSF003167 2 577 1.1E-177 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 SUPERFAMILY SSF55874 447 567 4.06E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 569 3.6E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 SMART SM00387 478 571 1.2E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 Pfam PF07730 Histidine kinase 369 437 7.5E-17 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL539_RS20350 936a1a62a53c72beb9ddf06eedd24bc7 578 Gene3D G3DSA:3.30.565.10 438 577 2.4E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS11015 7ed17564a652e0b711f5f23c6340934f 295 PIRSF PIRSF000401 1 295 2.5E-100 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL539_RS11015 7ed17564a652e0b711f5f23c6340934f 295 Gene3D G3DSA:3.40.50.150 102 295 2.3E-34 T 29-03-2018 AL539_RS11015 7ed17564a652e0b711f5f23c6340934f 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.831 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL539_RS11015 7ed17564a652e0b711f5f23c6340934f 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.3E-109 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL539_RS11015 7ed17564a652e0b711f5f23c6340934f 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.1E-105 T 29-03-2018 AL539_RS11015 7ed17564a652e0b711f5f23c6340934f 295 SUPERFAMILY SSF53335 44 274 1.44E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS24300 be44822b5b552917fef47705607eaf63 479 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 29-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 29-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 SMART SM01060 7 391 1.1E-288 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 Pfam PF06628 Catalase-related immune-responsive 416 474 1.4E-21 T 29-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 SUPERFAMILY SSF56634 3 478 1.02E-215 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 PIRSF PIRSF038928 1 479 1.3E-222 T 29-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 Gene3D G3DSA:2.40.180.10 1 357 7.8E-163 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 PRINTS PR00067 Catalase signature 83 101 1.1E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 PRINTS PR00067 Catalase signature 320 346 1.1E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 PRINTS PR00067 Catalase signature 104 121 1.1E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 PRINTS PR00067 Catalase signature 123 141 1.1E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 PRINTS PR00067 Catalase signature 20 43 1.1E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 PRINTS PR00067 Catalase signature 288 315 1.1E-72 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS24300 be44822b5b552917fef47705607eaf63 479 Pfam PF00199 Catalase 7 387 6.9E-191 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.9E-23 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 47.943 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 7.5E-111 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 29-03-2018 IPR018336 Ribonuclease PH, conserved site AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 SUPERFAMILY SSF54211 1 181 4.96E-45 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 SUPERFAMILY SSF55666 153 236 5.5E-25 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 Gene3D G3DSA:3.30.230.70 1 238 8.0E-60 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS13120 d2ad8c5a066db8e30d856c30a1c8df15 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 3.0E-10 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 Gene3D G3DSA:3.40.190.10 99 186 5.1E-13 T 29-03-2018 AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 Gene3D G3DSA:1.10.10.10 4 91 3.8E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 Pfam PF03466 LysR substrate binding domain 100 299 1.9E-22 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 SUPERFAMILY SSF46785 7 88 2.03E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 SUPERFAMILY SSF53850 92 298 7.6E-40 T 29-03-2018 AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.6E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12340 ed31f8daa75f331170d5c236046081e5 314 Gene3D G3DSA:3.40.190.10 187 271 1.1E-11 T 29-03-2018 AL539_RS23170 0d2a0b091fb88d406605c12dbe95ff25 338 Pfam PF12680 SnoaL-like domain 11 132 1.2E-9 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL539_RS23170 0d2a0b091fb88d406605c12dbe95ff25 338 SUPERFAMILY SSF54427 5 153 5.01E-25 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS23170 0d2a0b091fb88d406605c12dbe95ff25 338 Gene3D G3DSA:3.10.450.50 170 325 3.7E-8 T 29-03-2018 AL539_RS23170 0d2a0b091fb88d406605c12dbe95ff25 338 Gene3D G3DSA:3.10.450.50 2 149 2.8E-14 T 29-03-2018 AL539_RS23170 0d2a0b091fb88d406605c12dbe95ff25 338 SUPERFAMILY SSF54427 185 328 1.62E-16 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 SMART SM00354 7 77 1.3E-27 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 SUPERFAMILY SSF53822 66 334 1.2E-52 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 SUPERFAMILY SSF47413 7 65 6.43E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 Gene3D G3DSA:1.10.260.40 22 60 8.9E-22 T 29-03-2018 AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 Gene3D G3DSA:3.40.50.2300 180 311 7.5E-34 T 29-03-2018 AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 6.7E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 Pfam PF13377 Periplasmic binding protein-like domain 174 333 1.3E-28 T 29-03-2018 AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 Gene3D G3DSA:1.10.10.10 2 21 9.8E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23100 16bd800b96afa3a6a2a596d37f0075cc 335 Gene3D G3DSA:3.40.50.2300 61 179 2.3E-24 T 29-03-2018 AL539_RS13725 8367e5575ccd316bcb98ac72df9a64ce 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 159 1.1E-43 T 29-03-2018 IPR021727 Protein of unknown function DUF3299 AL539_RS18880 2a07b39ff2b77283b1b24423d1041c54 207 Pfam PF07883 Cupin domain 147 204 2.0E-10 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AL539_RS18880 2a07b39ff2b77283b1b24423d1041c54 207 Pfam PF01381 Helix-turn-helix 32 84 1.4E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS18880 2a07b39ff2b77283b1b24423d1041c54 207 SMART SM00530 31 86 1.3E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS18880 2a07b39ff2b77283b1b24423d1041c54 207 SUPERFAMILY SSF51182 97 204 6.29E-26 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS18880 2a07b39ff2b77283b1b24423d1041c54 207 SUPERFAMILY SSF47413 26 90 1.58E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS18880 2a07b39ff2b77283b1b24423d1041c54 207 Gene3D G3DSA:2.60.120.10 92 207 5.2E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS18880 2a07b39ff2b77283b1b24423d1041c54 207 Gene3D G3DSA:1.10.260.40 10 90 1.9E-15 T 29-03-2018 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 1.1E-49 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13560 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS26095 730067dc14f5a38539fb137d7e549faa 153 SUPERFAMILY SSF55874 35 146 1.23E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS26095 730067dc14f5a38539fb137d7e549faa 153 Gene3D G3DSA:3.30.565.10 13 142 4.8E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS26095 730067dc14f5a38539fb137d7e549faa 153 Pfam PF13581 Histidine kinase-like ATPase domain 15 134 3.2E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19275 49615d46d671de35e87f7e4bf4c3f08d 433 Pfam PF13584 Oxygen tolerance 65 294 5.4E-25 T 29-03-2018 IPR025738 Aerotolerance-related protein BatD AL539_RS16435 a66201d28b99e7357ac470baf6f8ad2b 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 1.8E-17 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AL539_RS16435 a66201d28b99e7357ac470baf6f8ad2b 104 Gene3D G3DSA:1.10.287.1160 67 95 1.2E-13 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL539_RS16435 a66201d28b99e7357ac470baf6f8ad2b 104 SUPERFAMILY SSF101498 2 97 1.57E-21 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL539_RS16435 a66201d28b99e7357ac470baf6f8ad2b 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 3.1E-23 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL539_RS14575 b54443b4a947d465e415bb0c418fde32 398 Pfam PF01098 Cell cycle protein 26 380 2.4E-113 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AL539_RS14575 b54443b4a947d465e415bb0c418fde32 398 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 22 390 41.387 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AL539_RS14575 b54443b4a947d465e415bb0c418fde32 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.4E-128 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AL539_RS14575 b54443b4a947d465e415bb0c418fde32 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 Pfam PF12833 Helix-turn-helix domain 185 262 2.0E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 SUPERFAMILY SSF46689 215 264 2.33E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 SUPERFAMILY SSF51215 24 147 2.48E-5 T 29-03-2018 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 Gene3D G3DSA:1.10.10.60 160 214 0.0025 T 29-03-2018 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 Gene3D G3DSA:1.10.10.60 215 268 2.2E-13 T 29-03-2018 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 SMART SM00342 179 261 1.3E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 6.0E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 6.0E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS25545 4be8f0597500351da796607a0c6f0dae 269 Gene3D G3DSA:2.60.120.280 4 152 1.1E-6 T 29-03-2018 AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 Gene3D G3DSA:3.40.50.720 117 301 1.4E-49 T 29-03-2018 AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 9.0E-51 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 9.5E-34 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 SUPERFAMILY SSF51735 103 299 4.4E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 SUPERFAMILY SSF52283 1 136 2.98E-41 T 29-03-2018 AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL539_RS22060 ee6137ae6a2c56f019f6bde403d62b04 331 Gene3D G3DSA:3.40.50.720 1 116 1.1E-25 T 29-03-2018 AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.4E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.4E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.4E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 Gene3D G3DSA:1.10.10.10 118 216 1.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 SMART SM00421 154 211 8.7E-24 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 1.4E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24150 679251e3e8eb8d0ea2470b0e26b48538 222 SUPERFAMILY SSF46894 151 213 2.24E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS13135 496eace9c4db526e05741d4c164155e2 196 SUPERFAMILY SSF48498 81 191 4.0E-11 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS13135 496eace9c4db526e05741d4c164155e2 196 Gene3D G3DSA:1.10.10.60 3 56 6.5E-13 T 29-03-2018 AL539_RS13135 496eace9c4db526e05741d4c164155e2 196 SUPERFAMILY SSF46689 5 78 1.12E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS13135 496eace9c4db526e05741d4c164155e2 196 Gene3D G3DSA:1.10.357.10 57 196 3.8E-21 T 29-03-2018 AL539_RS13135 496eace9c4db526e05741d4c164155e2 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.256 T 29-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AL539_RS13135 496eace9c4db526e05741d4c164155e2 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 3.0E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 Pfam PF00571 CBS domain 345 393 1.4E-6 T 29-03-2018 IPR000644 CBS domain AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 SUPERFAMILY SSF52540 43 271 1.93E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 Gene3D G3DSA:3.10.580.10 284 395 1.3E-11 T 29-03-2018 AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 3.4E-150 T 29-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 Gene3D G3DSA:3.40.50.300 1 283 4.9E-76 T 29-03-2018 AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 SUPERFAMILY SSF54631 274 392 1.7E-15 T 29-03-2018 AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 SMART SM00382 53 242 3.2E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02945 65a29a7d0fc25a91abf14fca3a7ac613 395 Pfam PF00005 ABC transporter 45 192 8.0E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS02570 23ac256c8a46824f75fb2345da978050 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 5.9E-56 T 29-03-2018 AL539_RS02570 23ac256c8a46824f75fb2345da978050 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 4.2E-14 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS02570 23ac256c8a46824f75fb2345da978050 357 PIRSF PIRSF009283 1 355 9.4E-125 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL539_RS02570 23ac256c8a46824f75fb2345da978050 357 Gene3D G3DSA:3.10.180.10 2 154 1.0E-13 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS02570 23ac256c8a46824f75fb2345da978050 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 2.6E-131 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL539_RS02570 23ac256c8a46824f75fb2345da978050 357 Gene3D G3DSA:3.10.180.10 158 355 1.8E-61 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS02570 23ac256c8a46824f75fb2345da978050 357 SUPERFAMILY SSF54593 5 341 8.31E-79 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS20230 2f7dddab25a02386cc825573105da6a4 249 Pfam PF00899 ThiF family 12 245 3.3E-63 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL539_RS20230 2f7dddab25a02386cc825573105da6a4 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 7.8E-133 T 29-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AL539_RS20230 2f7dddab25a02386cc825573105da6a4 249 Gene3D G3DSA:3.40.50.720 1 249 1.2E-74 T 29-03-2018 AL539_RS20230 2f7dddab25a02386cc825573105da6a4 249 SUPERFAMILY SSF69572 4 249 1.31E-85 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 SUPERFAMILY SSF51246 317 389 1.3E-18 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 Gene3D G3DSA:3.40.50.20 12 110 3.7E-20 T 29-03-2018 AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 Pfam PF02222 ATP-grasp domain 121 293 5.2E-58 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 Gene3D G3DSA:3.30.1490.20 127 194 3.6E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 3.3E-191 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 SUPERFAMILY SSF52440 2 110 6.62E-34 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 Gene3D G3DSA:3.30.470.20 195 389 1.9E-37 T 29-03-2018 AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 SUPERFAMILY SSF56059 111 313 1.71E-57 T 29-03-2018 AL539_RS02350 d79eef1b51555af1ee367dd9b6e6a38c 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 51.946 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL539_RS13860 67dcf5eaaa484580abc1cca3396dfa19 528 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 518 7.0E-162 T 29-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AL539_RS13860 67dcf5eaaa484580abc1cca3396dfa19 528 Gene3D G3DSA:1.10.3720.10 40 260 3.5E-29 T 29-03-2018 AL539_RS13860 67dcf5eaaa484580abc1cca3396dfa19 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 356 512 2.3E-7 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS13860 67dcf5eaaa484580abc1cca3396dfa19 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 256 5.3E-8 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS13860 67dcf5eaaa484580abc1cca3396dfa19 528 SUPERFAMILY SSF161098 283 521 6.41E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS13860 67dcf5eaaa484580abc1cca3396dfa19 528 Gene3D G3DSA:1.10.3720.10 283 527 5.1E-26 T 29-03-2018 AL539_RS13860 67dcf5eaaa484580abc1cca3396dfa19 528 SUPERFAMILY SSF161098 18 257 3.79E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 SUPERFAMILY SSF46894 139 211 3.27E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.9E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 Gene3D G3DSA:3.40.50.2300 4 129 1.3E-37 T 29-03-2018 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 SMART SM00448 5 118 3.5E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 SMART SM00421 148 205 3.8E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 Gene3D G3DSA:1.10.10.10 130 212 4.6E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 Pfam PF00072 Response regulator receiver domain 7 119 3.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.6E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.6E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.6E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS05700 72c57cf8955c4db1b79471f674bd779a 212 SUPERFAMILY SSF52172 4 135 3.42E-35 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS15250 675574ba20aac641ba0ebf8e0fb1523b 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.133 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL539_RS15250 675574ba20aac641ba0ebf8e0fb1523b 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 7.5E-159 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL539_RS15250 675574ba20aac641ba0ebf8e0fb1523b 350 Gene3D G3DSA:3.40.1780.10 175 346 2.6E-67 T 29-03-2018 AL539_RS15250 675574ba20aac641ba0ebf8e0fb1523b 350 Gene3D G3DSA:3.40.1780.10 1 145 1.3E-28 T 29-03-2018 AL539_RS15250 675574ba20aac641ba0ebf8e0fb1523b 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.8E-133 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL539_RS15250 675574ba20aac641ba0ebf8e0fb1523b 350 SUPERFAMILY SSF111337 1 345 2.62E-138 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL539_RS08490 d78e6f6307ecd6833c60dbbf15f076a1 430 SUPERFAMILY SSF51261 145 391 1.31E-71 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS08490 d78e6f6307ecd6833c60dbbf15f076a1 430 Pfam PF01551 Peptidase family M23 296 390 4.1E-31 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS08490 d78e6f6307ecd6833c60dbbf15f076a1 430 Gene3D G3DSA:2.70.70.10 264 428 4.8E-40 T 29-03-2018 AL539_RS08490 d78e6f6307ecd6833c60dbbf15f076a1 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 8.1E-5 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SUPERFAMILY SSF54556 629 752 1.31E-14 T 29-03-2018 IPR029070 Chitinase insertion domain AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Pfam PF00704 Glycosyl hydrolases family 18 323 782 1.6E-84 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Gene3D G3DSA:2.10.10.20 22 86 7.6E-16 T 29-03-2018 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Gene3D G3DSA:2.10.10.20 992 1052 1.2E-9 T 29-03-2018 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Pfam PF14600 Cellulose-binding domain 998 1050 2.7E-14 T 29-03-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Gene3D G3DSA:2.60.40.10 217 282 3.2E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SUPERFAMILY SSF51055 22 86 6.67E-18 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SUPERFAMILY SSF51055 995 1052 3.14E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SUPERFAMILY SSF51445 754 786 3.69E-73 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SUPERFAMILY SSF51445 316 629 3.69E-73 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SMART SM00636 322 782 2.0E-118 T 29-03-2018 IPR011583 Chitinase II GO:0008061 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SMART SM00495 1008 1050 5.1E-7 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 SMART SM00495 37 82 7.2E-15 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Gene3D G3DSA:2.40.50.70 159 216 2.8E-12 T 29-03-2018 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Gene3D G3DSA:2.40.50.70 87 136 7.9E-14 T 29-03-2018 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 ProSitePatterns PS01095 Chitinases family 18 active site. 471 479 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Gene3D G3DSA:3.20.20.80 305 633 3.6E-65 T 29-03-2018 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Pfam PF06483 Chitinase C 810 975 2.2E-72 T 29-03-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS18770 52d01189835c165e170c41cc24cfe5f5 1053 Gene3D G3DSA:3.10.50.10 634 752 7.1E-20 T 29-03-2018 IPR029070 Chitinase insertion domain AL539_RS09305 78c63a7ec6046ef474656e284bdc44a3 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.726 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL539_RS09305 78c63a7ec6046ef474656e284bdc44a3 239 Gene3D G3DSA:3.40.50.150 29 239 6.2E-29 T 29-03-2018 AL539_RS09305 78c63a7ec6046ef474656e284bdc44a3 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 48 238 6.9E-68 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL539_RS09305 78c63a7ec6046ef474656e284bdc44a3 239 Pfam PF02390 Putative methyltransferase 62 232 8.7E-59 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL539_RS09305 78c63a7ec6046ef474656e284bdc44a3 239 SUPERFAMILY SSF53335 16 238 1.16E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS14985 eb2079378b9e232afd8120ac6b2d0452 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 2.0E-23 T 29-03-2018 IPR021242 Protein of unknown function DUF2799 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 5.7E-98 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 29-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 Gene3D G3DSA:3.30.360.10 141 234 3.5E-36 T 29-03-2018 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.8E-39 T 29-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 PIRSF PIRSF000161 1 268 9.9E-89 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.525 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 SUPERFAMILY SSF51735 236 268 1.81E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 SUPERFAMILY SSF51735 1 126 1.81E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 9.3E-44 T 29-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 SUPERFAMILY SSF55347 127 236 1.31E-37 T 29-03-2018 AL539_RS14625 af4bce86b0e9296202b4af8f3bc5961f 269 Gene3D G3DSA:3.40.50.720 1 140 5.6E-28 T 29-03-2018 AL539_RS01895 b67cf19e3193f23a29e95bafdb882d5b 215 Gene3D G3DSA:3.40.50.300 1 206 1.1E-48 T 29-03-2018 AL539_RS01895 b67cf19e3193f23a29e95bafdb882d5b 215 SUPERFAMILY SSF52540 10 199 1.15E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01895 b67cf19e3193f23a29e95bafdb882d5b 215 Pfam PF00005 ABC transporter 22 163 3.8E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS01895 b67cf19e3193f23a29e95bafdb882d5b 215 SMART SM00382 28 214 3.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 Gene3D G3DSA:1.10.4030.10 194 237 0.068 T 29-03-2018 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 Gene3D G3DSA:1.10.4030.10 37 172 7.2E-25 T 29-03-2018 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 Pfam PF13624 SurA N-terminal domain 1 166 3.6E-51 T 29-03-2018 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 SUPERFAMILY SSF54534 225 361 1.11E-31 T 29-03-2018 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 Pfam PF13616 PPIC-type PPIASE domain 263 361 7.2E-25 T 29-03-2018 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 Gene3D G3DSA:3.10.50.40 396 498 0.0014 T 29-03-2018 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 Gene3D G3DSA:3.10.50.40 260 387 3.2E-41 T 29-03-2018 AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 SUPERFAMILY SSF109998 203 244 4.19E-38 T 29-03-2018 IPR027304 Trigger factor/SurA domain AL539_RS17150 eaef7a77b02908ac154a1b6beb32c540 619 SUPERFAMILY SSF109998 39 169 4.19E-38 T 29-03-2018 IPR027304 Trigger factor/SurA domain AL539_RS07845 813db0a12abe1ff846e64de1ebb840ea 370 Gene3D G3DSA:3.40.50.20 1 120 7.2E-7 T 29-03-2018 AL539_RS07845 813db0a12abe1ff846e64de1ebb840ea 370 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 258 265 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS07845 813db0a12abe1ff846e64de1ebb840ea 370 SUPERFAMILY SSF56059 125 277 6.27E-9 T 29-03-2018 AL539_RS07845 813db0a12abe1ff846e64de1ebb840ea 370 Pfam PF02655 ATP-grasp domain 110 267 6.7E-7 T 29-03-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 AL539_RS07845 813db0a12abe1ff846e64de1ebb840ea 370 Gene3D G3DSA:3.30.470.20 180 287 2.5E-5 T 29-03-2018 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 Gene3D G3DSA:4.10.520.10 1 98 3.2E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 SMART SM00411 3 92 1.6E-40 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.499 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 SUPERFAMILY SSF47729 3 95 3.68E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.3E-50 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS02335 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS01540 9cb8be29dd9d6046c54c0366650afeac 289 Gene3D G3DSA:1.20.1250.20 154 259 0.11 T 29-03-2018 AL539_RS01540 9cb8be29dd9d6046c54c0366650afeac 289 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.935 T 29-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AL539_RS01540 9cb8be29dd9d6046c54c0366650afeac 289 Pfam PF01435 Peptidase family M48 78 286 8.2E-41 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL539_RS01540 9cb8be29dd9d6046c54c0366650afeac 289 Gene3D G3DSA:3.30.2010.10 68 153 5.6E-21 T 29-03-2018 AL539_RS13615 43ecbee32af215b0bd10414e148ba336 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 29-03-2018 IPR018038 Ribosomal protein L30, conserved site AL539_RS13615 43ecbee32af215b0bd10414e148ba336 58 PIRSF PIRSF002211 1 58 6.5E-29 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13615 43ecbee32af215b0bd10414e148ba336 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 3.1E-27 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13615 43ecbee32af215b0bd10414e148ba336 58 SUPERFAMILY SSF55129 1 58 2.22E-23 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL539_RS13615 43ecbee32af215b0bd10414e148ba336 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.1E-21 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL539_RS13615 43ecbee32af215b0bd10414e148ba336 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.083 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13615 43ecbee32af215b0bd10414e148ba336 58 Gene3D G3DSA:3.30.1390.20 4 58 2.3E-26 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.9E-20 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 Gene3D G3DSA:3.20.20.60 250 573 1.2E-103 T 29-03-2018 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 29-03-2018 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 29-03-2018 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 29-03-2018 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 29-03-2018 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.2E-32 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 Gene3D G3DSA:1.10.274.10 24 145 1.6E-35 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 Gene3D G3DSA:3.50.30.10 146 244 8.5E-25 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 SUPERFAMILY SSF51621 249 549 9.95E-110 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.5E-247 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 9.3E-125 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 SUPERFAMILY SSF47831 24 143 6.41E-33 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 SUPERFAMILY SSF52009 125 243 1.57E-34 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS16535 2f85c502fec8bba425aa3c2fd83facaf 574 PIRSF PIRSF000732 1 574 2.0E-219 T 29-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 Pfam PF02384 N-6 DNA Methylase 160 469 5.7E-110 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 478 4.6E-88 T 29-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 Gene3D G3DSA:3.40.50.150 181 463 1.3E-66 T 29-03-2018 AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 SUPERFAMILY SSF53335 10 504 4.98E-140 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 285 297 1.3E-12 T 29-03-2018 AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 199 1.3E-12 T 29-03-2018 AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 1.3E-12 T 29-03-2018 AL539_RS00325 375cbff7ad169832a782546622ee9acc 505 Pfam PF12161 HsdM N-terminal domain 12 145 3.9E-21 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_RS04370 4b029a1f4ae1f242925834737b95a401 94 Pfam PF07216 LcrG protein 1 94 2.2E-35 T 29-03-2018 IPR009863 Type III secretion protein, LcrG AL539_RS04370 4b029a1f4ae1f242925834737b95a401 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 94 7.0E-36 T 29-03-2018 IPR009863 Type III secretion protein, LcrG AL539_RS04370 4b029a1f4ae1f242925834737b95a401 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 94 2.0E-27 T 29-03-2018 IPR009863 Type III secretion protein, LcrG AL539_RS17035 351dca58f7153550b49813a9852f271c 242 Gene3D G3DSA:3.40.47.10 3 163 5.8E-5 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS17035 351dca58f7153550b49813a9852f271c 242 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 240 1.5E-73 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_RS17035 351dca58f7153550b49813a9852f271c 242 SUPERFAMILY SSF53901 42 154 3.06E-6 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 145 210 7.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 4 144 3.3E-33 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS10515 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS15345 e10c5cec8857dc0027bc0cfc37ff3e82 375 Gene3D G3DSA:3.20.20.70 16 347 1.0E-43 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS15345 e10c5cec8857dc0027bc0cfc37ff3e82 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.739 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS15345 e10c5cec8857dc0027bc0cfc37ff3e82 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 1.7E-159 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS15345 e10c5cec8857dc0027bc0cfc37ff3e82 375 SUPERFAMILY SSF102114 103 312 2.49E-13 T 29-03-2018 AL539_RS15345 e10c5cec8857dc0027bc0cfc37ff3e82 375 PIRSF PIRSF006004 3 366 2.4E-143 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS15345 e10c5cec8857dc0027bc0cfc37ff3e82 375 Pfam PF04055 Radical SAM superfamily 109 283 1.3E-14 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 2.4E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 2.4E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 2.4E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 2.4E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 SUPERFAMILY SSF46785 9 156 3.29E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 Pfam PF01047 MarR family 50 110 7.4E-16 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 SMART SM00347 42 145 1.7E-26 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS02820 4af757cbe9da75ec6b1d082b2063b0bc 160 Gene3D G3DSA:1.10.10.10 1 159 1.5E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13735 b91a7c2040376efcf62a5ec9a5e5dfb0 242 Pfam PF00005 ABC transporter 30 185 3.8E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS13735 b91a7c2040376efcf62a5ec9a5e5dfb0 242 Gene3D G3DSA:3.40.50.300 4 235 7.8E-49 T 29-03-2018 AL539_RS13735 b91a7c2040376efcf62a5ec9a5e5dfb0 242 SMART SM00382 35 233 3.2E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS13735 b91a7c2040376efcf62a5ec9a5e5dfb0 242 SUPERFAMILY SSF52540 31 229 4.09E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.8E-29 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 SMART SM00883 2 95 1.7E-40 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 SUPERFAMILY SSF50129 1 96 1.08E-27 T 29-03-2018 IPR011032 GroES-like AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 Gene3D G3DSA:2.30.33.40 1 96 8.6E-30 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.1E-24 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-24 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-24 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-24 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS21385 ead2c4041bf61ccee63dc0d3d6b3087d 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.605 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS08180 baf8bac3474cfe60c642c67789d74f76 317 SUPERFAMILY SSF143865 3 236 2.48E-25 T 29-03-2018 AL539_RS08180 baf8bac3474cfe60c642c67789d74f76 317 SUPERFAMILY SSF144083 245 306 1.44E-14 T 29-03-2018 AL539_RS08180 baf8bac3474cfe60c642c67789d74f76 317 Gene3D G3DSA:3.30.460.20 6 126 3.3E-10 T 29-03-2018 AL539_RS08180 baf8bac3474cfe60c642c67789d74f76 317 Gene3D G3DSA:1.20.58.340 244 308 2.9E-16 T 29-03-2018 AL539_RS08180 baf8bac3474cfe60c642c67789d74f76 317 Pfam PF01544 CorA-like Mg2+ transporter protein 30 305 9.2E-47 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AL539_RS08180 baf8bac3474cfe60c642c67789d74f76 317 Gene3D G3DSA:1.20.58.340 127 243 3.9E-5 T 29-03-2018 AL539_RS03110 5ae90d00198931c4cac57d3a7de25460 405 Pfam PF11871 Domain of unknown function (DUF3391) 9 136 5.2E-17 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 AL539_RS03110 5ae90d00198931c4cac57d3a7de25460 405 Gene3D G3DSA:1.10.3210.10 111 331 2.8E-38 T 29-03-2018 AL539_RS03110 5ae90d00198931c4cac57d3a7de25460 405 SMART SM00471 163 299 1.2E-9 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS03110 5ae90d00198931c4cac57d3a7de25460 405 Pfam PF01966 HD domain 168 289 2.4E-13 T 29-03-2018 IPR006674 HD domain AL539_RS03110 5ae90d00198931c4cac57d3a7de25460 405 SUPERFAMILY SSF109604 158 329 1.96E-30 T 29-03-2018 AL539_RS07180 9a94522fbd32e7cbbfcb9b5d1dd47213 425 Gene3D G3DSA:2.40.160.60 26 425 1.4E-73 T 29-03-2018 AL539_RS07180 9a94522fbd32e7cbbfcb9b5d1dd47213 425 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 425 3.8E-113 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL539_RS07180 9a94522fbd32e7cbbfcb9b5d1dd47213 425 SUPERFAMILY SSF56935 27 425 5.95E-87 T 29-03-2018 AL539_RS02560 ebbc5a9d9799cdd1b7eb2739f32e6b3c 536 PIRSF PIRSF002741 1 536 1.7E-101 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS02560 ebbc5a9d9799cdd1b7eb2739f32e6b3c 536 Gene3D G3DSA:3.10.105.10 310 503 6.7E-50 T 29-03-2018 AL539_RS02560 ebbc5a9d9799cdd1b7eb2739f32e6b3c 536 Gene3D G3DSA:3.40.190.10 173 309 8.4E-38 T 29-03-2018 AL539_RS02560 ebbc5a9d9799cdd1b7eb2739f32e6b3c 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 5.8E-87 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS02560 ebbc5a9d9799cdd1b7eb2739f32e6b3c 536 SUPERFAMILY SSF53850 35 529 2.9E-129 T 29-03-2018 AL539_RS02560 ebbc5a9d9799cdd1b7eb2739f32e6b3c 536 Gene3D G3DSA:3.90.76.10 60 172 1.8E-34 T 29-03-2018 AL539_RS22495 dbbf47666cf9bd6546b56030417276ef 231 Gene3D G3DSA:2.60.120.10 134 231 2.8E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS22495 dbbf47666cf9bd6546b56030417276ef 231 Pfam PF02678 Pirin 12 119 1.5E-33 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL539_RS22495 dbbf47666cf9bd6546b56030417276ef 231 SUPERFAMILY SSF51182 1 230 3.43E-72 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS22495 dbbf47666cf9bd6546b56030417276ef 231 PIRSF PIRSF006232 1 230 9.1E-55 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL539_RS22495 dbbf47666cf9bd6546b56030417276ef 231 Gene3D G3DSA:2.60.120.10 12 133 7.7E-46 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS19875 c3716165cbd75984fe5cb2b139803058 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 111 5.4E-29 T 29-03-2018 AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 Gene3D G3DSA:3.40.50.300 180 462 9.4E-66 T 29-03-2018 AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 Gene3D G3DSA:1.10.860.10 10 162 2.4E-45 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 SUPERFAMILY SSF52540 197 268 8.59E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 SUPERFAMILY SSF52540 295 449 8.59E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 SUPERFAMILY SSF48024 18 129 3.53E-37 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.1E-174 T 29-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 6.1E-35 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL539_RS10230 bf680fce808b796dcecccb25f6470eef 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 6.2E-113 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AL539_RS18545 b4655e23659c55501a131246d0fe9903 311 SMART SM00797 27 308 4.3E-129 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL539_RS18545 b4655e23659c55501a131246d0fe9903 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 292 3.8E-76 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL539_RS18545 b4655e23659c55501a131246d0fe9903 311 SUPERFAMILY SSF50891 185 292 1.29E-9 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS18545 b4655e23659c55501a131246d0fe9903 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 2.0E-82 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 SUPERFAMILY SSF111304 2 199 3.14E-72 T 29-03-2018 IPR023627 Recombination protein RecR AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 Pfam PF13662 Toprim domain 82 172 4.3E-23 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 SMART SM00493 81 166 4.5E-17 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 Gene3D G3DSA:3.40.1360.10 78 171 2.2E-34 T 29-03-2018 AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.198 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.2E-78 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 29-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AL539_RS06990 7cbf62d148a5c64f83737a380ff105b0 199 Pfam PF02132 RecR protein 41 77 2.1E-15 T 29-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 PIRSF PIRSF036618 1 592 0.0 T 29-03-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 SUPERFAMILY SSF63882 192 362 1.14E-46 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 SUPERFAMILY SSF52540 7 169 1.94E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Gene3D G3DSA:3.40.980.10 349 510 4.8E-52 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 7.1E-43 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 4.6E-20 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 SUPERFAMILY SSF53218 363 508 2.22E-43 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 SMART SM00852 366 503 9.3E-40 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 SUPERFAMILY SSF63867 512 590 6.41E-23 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 1.8E-48 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Gene3D G3DSA:2.40.340.10 515 590 1.3E-21 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 195 353 1.6E-38 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Gene3D G3DSA:2.170.190.11 246 318 2.5E-24 T 29-03-2018 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.5E-25 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Gene3D G3DSA:3.90.105.10 212 245 1.5E-9 T 29-03-2018 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Gene3D G3DSA:3.90.105.10 319 348 4.6E-4 T 29-03-2018 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 Gene3D G3DSA:3.40.50.300 7 173 1.6E-27 T 29-03-2018 AL539_RS03495 931b708d3cf6a3bb62bbed63ab88b1d7 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 2.4E-31 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS01480 ffe0616cc45ed1655409209d3041c9bc 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.355 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL539_RS01480 ffe0616cc45ed1655409209d3041c9bc 208 SUPERFAMILY SSF89392 30 207 3.81E-50 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_RS01480 ffe0616cc45ed1655409209d3041c9bc 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 1.9E-62 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL539_RS01480 ffe0616cc45ed1655409209d3041c9bc 208 Gene3D G3DSA:2.50.20.10 24 207 3.7E-34 T 29-03-2018 AL539_RS01480 ffe0616cc45ed1655409209d3041c9bc 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 196 2.4E-53 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL539_RS18885 c77ab4b2461ea47692196e56d21f046d 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL539_RS18885 c77ab4b2461ea47692196e56d21f046d 431 SUPERFAMILY SSF53383 9 430 5.11E-181 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS18885 c77ab4b2461ea47692196e56d21f046d 431 PIRSF PIRSF000412 4 431 1.3E-167 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL539_RS18885 c77ab4b2461ea47692196e56d21f046d 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.046 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL539_RS18885 c77ab4b2461ea47692196e56d21f046d 431 Gene3D G3DSA:3.90.1150.10 285 430 7.9E-59 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS18885 c77ab4b2461ea47692196e56d21f046d 431 Gene3D G3DSA:3.40.640.10 47 284 1.3E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS18885 c77ab4b2461ea47692196e56d21f046d 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 3.4E-174 T 29-03-2018 AL539_RS11850 7e58a3b192c152b2e6dac2ba8c0cd8aa 964 SUPERFAMILY SSF56672 407 676 4.67E-18 T 29-03-2018 AL539_RS11850 7e58a3b192c152b2e6dac2ba8c0cd8aa 964 Gene3D G3DSA:3.90.1600.10 369 759 2.3E-5 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS11850 7e58a3b192c152b2e6dac2ba8c0cd8aa 964 Pfam PF03175 DNA polymerase type B, organellar and viral 407 572 3.1E-12 T 29-03-2018 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus GO:0000166|GO:0003677|GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS15440 dca9631ed8bc0559af02c471cd9ca2f3 443 PIRSF PIRSF000521 1 438 1.6E-32 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS15440 dca9631ed8bc0559af02c471cd9ca2f3 443 Pfam PF00202 Aminotransferase class-III 11 434 5.1E-107 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS15440 dca9631ed8bc0559af02c471cd9ca2f3 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS15440 dca9631ed8bc0559af02c471cd9ca2f3 443 Gene3D G3DSA:3.90.1150.10 1 170 2.0E-41 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS15440 dca9631ed8bc0559af02c471cd9ca2f3 443 Gene3D G3DSA:3.90.1150.10 255 439 3.7E-47 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS15440 dca9631ed8bc0559af02c471cd9ca2f3 443 SUPERFAMILY SSF53383 7 437 3.65E-123 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS15440 dca9631ed8bc0559af02c471cd9ca2f3 443 Gene3D G3DSA:3.90.1150.10 171 254 0.024 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS16775 49722a868832e21c0ea73e2b101e0422 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.0E-34 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL539_RS16775 49722a868832e21c0ea73e2b101e0422 114 PIRSF PIRSF000169 1 114 1.1E-37 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL539_RS16775 49722a868832e21c0ea73e2b101e0422 114 Gene3D G3DSA:1.20.1300.10 1 114 2.5E-16 T 29-03-2018 AL539_RS16775 49722a868832e21c0ea73e2b101e0422 114 SUPERFAMILY SSF81343 4 113 1.64E-25 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS07475 a21e27dc2dc69047f1a17de7630632e6 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 1.7E-80 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL539_RS07475 a21e27dc2dc69047f1a17de7630632e6 300 Pfam PF04261 Dyp-type peroxidase family 5 293 2.9E-86 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL539_RS07475 a21e27dc2dc69047f1a17de7630632e6 300 SUPERFAMILY SSF54909 1 297 4.83E-92 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS04135 0c5cdbcb8f081719bad2133eab44c70e 294 Gene3D G3DSA:3.40.190.10 93 177 9.7E-17 T 29-03-2018 AL539_RS04135 0c5cdbcb8f081719bad2133eab44c70e 294 SUPERFAMILY SSF46785 5 112 1.57E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04135 0c5cdbcb8f081719bad2133eab44c70e 294 Gene3D G3DSA:3.40.190.10 178 258 2.1E-18 T 29-03-2018 AL539_RS04135 0c5cdbcb8f081719bad2133eab44c70e 294 SUPERFAMILY SSF53850 91 291 2.48E-38 T 29-03-2018 AL539_RS04135 0c5cdbcb8f081719bad2133eab44c70e 294 Gene3D G3DSA:1.10.10.10 3 85 6.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04135 0c5cdbcb8f081719bad2133eab44c70e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.2E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04135 0c5cdbcb8f081719bad2133eab44c70e 294 Pfam PF03466 LysR substrate binding domain 90 290 4.4E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Gene3D G3DSA:3.10.20.310 174 264 8.5E-20 T 29-03-2018 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.836 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Pfam PF07244 Surface antigen variable number repeat 176 263 4.4E-15 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Pfam PF07244 Surface antigen variable number repeat 266 344 4.1E-9 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.6E-17 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Gene3D G3DSA:2.40.160.50 388 804 1.1E-80 T 29-03-2018 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 2.6E-278 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Gene3D G3DSA:3.10.20.310 92 173 6.4E-14 T 29-03-2018 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Gene3D G3DSA:3.10.20.310 350 387 0.0028 T 29-03-2018 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Gene3D G3DSA:3.10.20.310 266 346 3.6E-9 T 29-03-2018 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 PIRSF PIRSF006076 1 804 5.0E-245 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Pfam PF01103 Surface antigen 448 804 5.4E-91 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL539_RS07725 71fd0229bab9f0ab21cb91b734558c58 804 Gene3D G3DSA:3.10.20.310 18 91 1.7E-6 T 29-03-2018 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.784 T 29-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 Gene3D G3DSA:1.25.40.10 322 449 0.077 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 Gene3D G3DSA:1.25.40.10 450 811 1.1E-44 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 Gene3D G3DSA:3.40.50.300 16 216 1.0E-4 T 29-03-2018 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 Gene3D G3DSA:1.10.10.10 836 896 2.4E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 SMART SM00421 836 893 5.8E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 SUPERFAMILY SSF52540 14 230 3.43E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 SUPERFAMILY SSF48452 442 805 1.28E-156 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS23270 2529c1e08ecc00f8491abeb7428a4eaf 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 708 2.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Gene3D G3DSA:3.30.450.20 339 475 8.4E-12 T 29-03-2018 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 26 360 2.0E-177 T 29-03-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SUPERFAMILY SSF55785 347 459 1.51E-5 T 29-03-2018 IPR000014 PAS domain AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SUPERFAMILY SSF52172 733 853 2.7E-29 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 2.9E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 2.9E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 2.9E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 2.9E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SUPERFAMILY SSF47384 469 547 3.53E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SMART SM00388 481 546 4.3E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SMART SM00448 734 846 1.7E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Gene3D G3DSA:3.40.50.2300 730 855 1.9E-30 T 29-03-2018 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SUPERFAMILY SSF55874 535 708 6.16E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Pfam PF00072 Response regulator receiver domain 736 845 1.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SMART SM00387 593 710 1.3E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Pfam PF09308 LuxQ, periplasmic 40 277 2.0E-96 T 29-03-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 482 546 2.7E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Gene3D G3DSA:3.30.565.10 541 710 9.9E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 Gene3D G3DSA:1.10.287.130 476 540 5.4E-18 T 29-03-2018 AL539_RS20480 a6b9d587cbc8b6949208556b01d67e52 858 SUPERFAMILY SSF103190 51 269 1.41E-68 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS14500 eb12c8241c530965e9410ab71f893c24 161 SUPERFAMILY SSF101738 4 120 6.8E-50 T 29-03-2018 IPR007481 Stringent starvation protein B AL539_RS14500 eb12c8241c530965e9410ab71f893c24 161 PIRSF PIRSF005276 3 161 2.7E-63 T 29-03-2018 IPR007481 Stringent starvation protein B AL539_RS14500 eb12c8241c530965e9410ab71f893c24 161 Pfam PF04386 Stringent starvation protein B 9 161 1.4E-42 T 29-03-2018 IPR007481 Stringent starvation protein B AL539_RS14500 eb12c8241c530965e9410ab71f893c24 161 Gene3D G3DSA:2.30.30.220 10 107 3.0E-41 T 29-03-2018 IPR007481 Stringent starvation protein B AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 Pfam PF01471 Putative peptidoglycan binding domain 464 519 9.9E-7 T 29-03-2018 IPR002477 Peptidoglycan binding-like AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 SMART SM00382 42 195 3.2E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 SUPERFAMILY SSF47090 452 526 4.19E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 Gene3D G3DSA:1.10.101.10 458 524 3.7E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 Gene3D G3DSA:3.90.70.10 341 457 1.8E-11 T 29-03-2018 AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 Gene3D G3DSA:3.40.50.300 18 201 4.2E-12 T 29-03-2018 AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 SUPERFAMILY SSF52540 6 264 3.37E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14350 dd6996d9ab5a928ddb310819315eeab0 538 Pfam PF13401 AAA domain 42 171 2.5E-22 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 Gene3D G3DSA:3.40.190.10 160 216 4.0E-4 T 29-03-2018 AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 463 1.2E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 Gene3D G3DSA:3.30.70.270 300 466 2.4E-42 T 29-03-2018 AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 258 3.6E-27 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 SMART SM00267 299 465 8.2E-46 T 29-03-2018 IPR000160 GGDEF domain AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 461 2.3E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 Gene3D G3DSA:3.40.190.10 36 159 1.0E-17 T 29-03-2018 AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 SUPERFAMILY SSF55073 315 464 7.61E-38 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 SUPERFAMILY SSF53850 41 258 8.06E-35 T 29-03-2018 AL539_RS25130 8c5bf6c152e95ea65420b0b7788bd7c7 480 SMART SM00062 40 262 5.4E-9 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS08190 956060f4ebba539cb4f37b1a88a9971c 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 1.1E-8 T 29-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL539_RS08190 956060f4ebba539cb4f37b1a88a9971c 183 Gene3D G3DSA:3.10.490.10 1 167 4.0E-20 T 29-03-2018 AL539_RS08190 956060f4ebba539cb4f37b1a88a9971c 183 SUPERFAMILY SSF110857 1 123 1.19E-15 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL539_RS10875 682ffa229c4c93071e62a33c2c9a4d77 460 PIRSF PIRSF006603 6 458 4.3E-132 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS10875 682ffa229c4c93071e62a33c2c9a4d77 460 Pfam PF01554 MatE 255 416 1.6E-23 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS10875 682ffa229c4c93071e62a33c2c9a4d77 460 Pfam PF01554 MatE 32 191 2.5E-25 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS10875 682ffa229c4c93071e62a33c2c9a4d77 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 423 1.1E-55 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 Gene3D G3DSA:1.10.10.10 166 248 5.5E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 SMART SM00419 187 235 4.3E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 SMART SM00100 30 151 1.6E-20 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.8E-15 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 Gene3D G3DSA:2.60.120.10 24 165 4.7E-20 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 SUPERFAMILY SSF51206 23 162 1.23E-31 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS03770 09a808a4dd99f3fec259e1d691963b4e 248 SUPERFAMILY SSF46785 165 245 2.02E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11700 dd2ba376d4f88994557eac9c6b1d080c 547 SUPERFAMILY SSF51735 1 228 2.1E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS11700 dd2ba376d4f88994557eac9c6b1d080c 547 Gene3D G3DSA:3.40.50.720 249 433 1.4E-10 T 29-03-2018 AL539_RS11700 dd2ba376d4f88994557eac9c6b1d080c 547 Gene3D G3DSA:3.40.50.720 1 248 3.7E-7 T 29-03-2018 AL539_RS11700 dd2ba376d4f88994557eac9c6b1d080c 547 Pfam PF04321 RmlD substrate binding domain 69 202 7.4E-15 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL539_RS11700 dd2ba376d4f88994557eac9c6b1d080c 547 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 256 342 3.3E-7 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL539_RS11700 dd2ba376d4f88994557eac9c6b1d080c 547 SUPERFAMILY SSF51735 257 420 3.69E-9 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 3.8E-32 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 3.8E-32 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 3.8E-32 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 3.8E-32 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 157 175 3.8E-32 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 3.8E-32 T 29-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 Gene3D G3DSA:3.40.50.150 216 358 1.2E-4 T 29-03-2018 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 Pfam PF00487 Fatty acid desaturase 45 262 5.9E-21 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AL539_RS19225 0cabbf91a1c7c867fbf2b25a235a6882 374 PIRSF PIRSF000345 4 332 1.4E-101 T 29-03-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 AL539_RS13225 36b0f7cdc19bd9be50f05f988921444c 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.8E-156 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL539_RS13225 36b0f7cdc19bd9be50f05f988921444c 293 SUPERFAMILY SSF53448 1 286 7.66E-92 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS13225 36b0f7cdc19bd9be50f05f988921444c 293 Gene3D G3DSA:3.90.550.10 1 293 3.9E-71 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS13225 36b0f7cdc19bd9be50f05f988921444c 293 Pfam PF00483 Nucleotidyl transferase 2 238 2.5E-71 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL539_RS10305 7e11362ea4a79de6f684aa01f76844fb 338 Gene3D G3DSA:3.30.420.40 1 165 2.1E-24 T 29-03-2018 AL539_RS10305 7e11362ea4a79de6f684aa01f76844fb 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 4.2E-73 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM AL539_RS10305 7e11362ea4a79de6f684aa01f76844fb 338 SMART SM00842 6 169 0.0087 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AL539_RS10305 7e11362ea4a79de6f684aa01f76844fb 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 3.1E-53 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM AL539_RS10305 7e11362ea4a79de6f684aa01f76844fb 338 Gene3D G3DSA:3.30.420.40 185 294 0.0035 T 29-03-2018 AL539_RS10305 7e11362ea4a79de6f684aa01f76844fb 338 PIRSF PIRSF019169 1 328 1.4E-91 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM AL539_RS10305 7e11362ea4a79de6f684aa01f76844fb 338 SUPERFAMILY SSF53067 6 165 3.42E-7 T 29-03-2018 AL539_RS12775 637837b0cdbb02c71d120458de9c200e 205 PIRSF PIRSF000005 1 205 3.4E-65 T 29-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL539_RS12775 637837b0cdbb02c71d120458de9c200e 205 Gene3D G3DSA:1.10.760.10 15 104 5.3E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS12775 637837b0cdbb02c71d120458de9c200e 205 Gene3D G3DSA:1.10.760.10 105 202 1.5E-24 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS12775 637837b0cdbb02c71d120458de9c200e 205 SUPERFAMILY SSF46626 6 105 1.23E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS12775 637837b0cdbb02c71d120458de9c200e 205 Pfam PF00034 Cytochrome c 25 103 1.4E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS12775 637837b0cdbb02c71d120458de9c200e 205 Pfam PF00034 Cytochrome c 116 201 1.8E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS12775 637837b0cdbb02c71d120458de9c200e 205 SUPERFAMILY SSF46626 114 203 3.15E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Gene3D G3DSA:3.40.50.2300 520 643 8.6E-27 T 29-03-2018 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SUPERFAMILY SSF55874 336 506 2.23E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SMART SM00448 527 638 1.7E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SMART SM00073 674 780 4.1E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Pfam PF00072 Response regulator receiver domain 529 638 2.9E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Pfam PF01627 Hpt domain 695 766 9.3E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SMART SM00091 155 221 8.3E-8 T 29-03-2018 IPR000014 PAS domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Gene3D G3DSA:1.20.120.160 644 772 7.9E-20 T 29-03-2018 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SUPERFAMILY SSF47384 270 347 2.16E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Gene3D G3DSA:3.30.565.10 353 516 1.9E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SMART SM00387 394 510 3.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Pfam PF08448 PAS fold 162 271 2.2E-18 T 29-03-2018 IPR013656 PAS fold-4 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SUPERFAMILY SSF47226 668 782 8.51E-29 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 PIRSF PIRSF003182 1 784 0.0 T 29-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Gene3D G3DSA:1.10.287.130 279 343 2.1E-16 T 29-03-2018 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SUPERFAMILY SSF52172 527 650 4.98E-26 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 3.4E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Gene3D G3DSA:1.10.287.970 3 88 4.7E-37 T 29-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Gene3D G3DSA:3.30.450.20 141 278 3.6E-27 T 29-03-2018 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SMART SM00388 282 347 9.8E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 SUPERFAMILY SSF55785 140 267 1.12E-25 T 29-03-2018 IPR000014 PAS domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 3.5E-18 T 29-03-2018 IPR000014 PAS domain AL539_RS14715 f01d07f2f83c9cb60eba413318d499d1 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.9E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19525 3afae16f7586f01e7f0f69afb5594d7c 292 Pfam PF04116 Fatty acid hydroxylase superfamily 99 233 3.9E-31 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL539_RS07665 a3f0c42c51945cc8067216197ba4ceeb 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 3.2E-6 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS07665 a3f0c42c51945cc8067216197ba4ceeb 281 Gene3D G3DSA:3.60.10.10 47 278 1.0E-13 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS07665 a3f0c42c51945cc8067216197ba4ceeb 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 55.813 T 29-03-2018 IPR022958 Uncharacterised protein family UPF0294 AL539_RS07665 a3f0c42c51945cc8067216197ba4ceeb 281 SUPERFAMILY SSF56219 59 279 7.98E-21 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 29-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 SMART SM01382 124 252 5.5E-91 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 PIRSF PIRSF002158 13 274 8.4E-99 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 SUPERFAMILY SSF50104 127 272 1.14E-60 T 29-03-2018 IPR008991 Translation protein SH3-like domain AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.639 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:4.10.950.10 197 273 2.0E-35 T 29-03-2018 IPR014726 Ribosomal protein L2, domain 3 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 7.9E-129 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 SMART SM01383 42 118 9.5E-44 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:2.30.30.30 119 195 2.4E-31 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:2.40.50.140 1 114 3.7E-46 T 29-03-2018 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 SUPERFAMILY SSF50249 2 125 3.77E-49 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.8E-32 T 29-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13540 599e1418f6d19132501fc30f48683fb5 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.8E-55 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 Gene3D G3DSA:3.30.110.10 91 183 4.5E-35 T 29-03-2018 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 Gene3D G3DSA:3.10.20.80 13 90 1.1E-28 T 29-03-2018 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 29-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 SUPERFAMILY SSF55200 95 183 3.92E-35 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 88 1.7E-27 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 183 1.1E-71 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 181 1.0E-37 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 SUPERFAMILY SSF54364 16 90 4.97E-26 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL539_RS02270 0881e4b5d1040acaf9c546a455fd522f 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 183 29.95 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF07650 KH domain 38 111 1.5E-18 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 29-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.1140.32 108 207 9.3E-39 T 29-03-2018 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 SMART SM00322 60 125 7.7E-8 T 29-03-2018 IPR004087 K Homology domain GO:0003676 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.529 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.300.20 17 107 1.2E-26 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.5E-97 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL539_RS13555 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS05470 828287f961a7aee65bc4e798be98e6ff 142 SUPERFAMILY SSF55729 15 129 2.09E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS05470 828287f961a7aee65bc4e798be98e6ff 142 Pfam PF13508 Acetyltransferase (GNAT) domain 45 124 9.3E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS05470 828287f961a7aee65bc4e798be98e6ff 142 Gene3D G3DSA:3.40.630.30 2 137 4.7E-13 T 29-03-2018 AL539_RS04395 92abee0fe365ff541572d7bc1d946ff9 124 SUPERFAMILY SSF69635 2 122 1.65E-44 T 29-03-2018 AL539_RS04395 92abee0fe365ff541572d7bc1d946ff9 124 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 6.4E-45 T 29-03-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 AL539_RS04395 92abee0fe365ff541572d7bc1d946ff9 124 Gene3D G3DSA:3.30.1460.10 4 120 1.2E-30 T 29-03-2018 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Gene3D G3DSA:3.40.50.300 99 210 3.2E-15 T 29-03-2018 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.3E-73 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.0E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 SMART SM00963 1 86 6.1E-37 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 SUPERFAMILY SSF52540 42 353 6.9E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Pfam PF02978 Signal peptide binding domain 329 427 3.7E-33 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Gene3D G3DSA:1.10.260.30 328 432 1.8E-38 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 SMART SM00962 100 296 1.4E-114 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Gene3D G3DSA:1.20.120.140 1 91 6.6E-30 T 29-03-2018 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.4E-179 T 29-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 SMART SM00382 99 247 9.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 29-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 SUPERFAMILY SSF47446 329 430 7.52E-38 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL539_RS08790 7a4b9a1b11f28b8b14e8d775cad26398 460 Gene3D G3DSA:1.20.120.140 211 310 1.7E-33 T 29-03-2018 AL539_RS22530 3422f768cc91120648e5809d6f7b350e 123 Gene3D G3DSA:1.10.10.10 1 75 3.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22530 3422f768cc91120648e5809d6f7b350e 123 Gene3D G3DSA:1.10.287.100 76 116 3.8E-9 T 29-03-2018 AL539_RS22530 3422f768cc91120648e5809d6f7b350e 123 SMART SM00345 14 73 1.1E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS22530 3422f768cc91120648e5809d6f7b350e 123 SUPERFAMILY SSF46785 1 82 2.06E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22530 3422f768cc91120648e5809d6f7b350e 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 6.7E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS04420 2a6f6abcb10f5f9de79e0d26e4820019 401 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 262 398 5.0E-45 T 29-03-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 AL539_RS06400 2af826b75f01eafed1945fa86b30ed21 210 Gene3D G3DSA:3.40.50.300 1 206 2.8E-46 T 29-03-2018 AL539_RS06400 2af826b75f01eafed1945fa86b30ed21 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.673 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL539_RS06400 2af826b75f01eafed1945fa86b30ed21 210 SUPERFAMILY SSF52540 2 208 2.1E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06400 2af826b75f01eafed1945fa86b30ed21 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 29-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL539_RS06400 2af826b75f01eafed1945fa86b30ed21 210 Pfam PF02223 Thymidylate kinase 9 199 1.4E-57 T 29-03-2018 AL539_RS06400 2af826b75f01eafed1945fa86b30ed21 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.2E-61 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL539_RS25535 e6b7ce4281e99d7768a8636a3c8e9032 274 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 268 1.4E-64 T 29-03-2018 IPR011862 Phosphate binding protein GO:0006810 AL539_RS25535 e6b7ce4281e99d7768a8636a3c8e9032 274 Gene3D G3DSA:3.40.190.10 169 271 5.1E-11 T 29-03-2018 AL539_RS25535 e6b7ce4281e99d7768a8636a3c8e9032 274 Pfam PF12849 PBP superfamily domain 18 255 1.5E-36 T 29-03-2018 IPR024370 PBP domain AL539_RS25535 e6b7ce4281e99d7768a8636a3c8e9032 274 SUPERFAMILY SSF53850 23 269 2.23E-65 T 29-03-2018 AL539_RS25535 e6b7ce4281e99d7768a8636a3c8e9032 274 Gene3D G3DSA:3.40.190.10 21 150 9.9E-35 T 29-03-2018 AL539_RS13110 bb5718cc738c613a7a7f5c9a82d9e2f5 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 9.2E-44 T 29-03-2018 IPR013527 YicC-like, N-terminal AL539_RS13110 bb5718cc738c613a7a7f5c9a82d9e2f5 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 29-03-2018 IPR013551 Domain of unknown function DUF1732 AL539_RS13110 bb5718cc738c613a7a7f5c9a82d9e2f5 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 7.4E-118 T 29-03-2018 IPR005229 Conserved hypothetical protein CHP00255 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PIRSF PIRSF006060 301 400 6.3 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PIRSF PIRSF006060 3 292 2.4E-11 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 3.3E-111 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 1.4E-112 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS03155 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 6.2E-80 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS24665 6ea8cf4f30eaaa59d7c1a7c3f19a1c74 299 Gene3D G3DSA:3.40.190.10 92 179 4.1E-4 T 29-03-2018 AL539_RS24665 6ea8cf4f30eaaa59d7c1a7c3f19a1c74 299 SUPERFAMILY SSF46785 9 90 2.46E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24665 6ea8cf4f30eaaa59d7c1a7c3f19a1c74 299 Gene3D G3DSA:1.10.10.10 2 87 5.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24665 6ea8cf4f30eaaa59d7c1a7c3f19a1c74 299 Gene3D G3DSA:3.40.190.10 180 266 4.2E-13 T 29-03-2018 AL539_RS24665 6ea8cf4f30eaaa59d7c1a7c3f19a1c74 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 2.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24665 6ea8cf4f30eaaa59d7c1a7c3f19a1c74 299 Pfam PF03466 LysR substrate binding domain 92 295 3.0E-23 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS24665 6ea8cf4f30eaaa59d7c1a7c3f19a1c74 299 SUPERFAMILY SSF53850 93 295 1.63E-25 T 29-03-2018 AL539_RS19960 c524a81dc4948f2b303cee47e329f2aa 1129 Pfam PF14331 ImcF-related N-terminal domain 154 407 7.5E-47 T 29-03-2018 IPR025743 ImcF-related, N-terminal domain AL539_RS19960 c524a81dc4948f2b303cee47e329f2aa 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 755 2.2E-43 T 29-03-2018 IPR009612 ImcF-related AL539_RS19960 c524a81dc4948f2b303cee47e329f2aa 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1127 4.5E-172 T 29-03-2018 IPR017731 Type VI secretion system, IcmF AL539_RS19960 c524a81dc4948f2b303cee47e329f2aa 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1078 3.0E-48 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL539_RS14375 80e78a7d6a4bec20862d8519a17c7656 228 Pfam PF01865 Protein of unknown function DUF47 9 225 6.5E-64 T 29-03-2018 IPR018445 Putative phosphate transport regulator AL539_RS14375 80e78a7d6a4bec20862d8519a17c7656 228 SUPERFAMILY SSF109755 31 218 8.55E-15 T 29-03-2018 AL539_RS14375 80e78a7d6a4bec20862d8519a17c7656 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 1.4E-65 T 29-03-2018 IPR002727 Protein of unknown function DUF47 AL539_RS14375 80e78a7d6a4bec20862d8519a17c7656 228 Gene3D G3DSA:1.20.58.220 116 227 4.4E-6 T 29-03-2018 AL539_RS13215 540db6bd0b7de39e4013dadf308a9814 235 Gene3D G3DSA:1.10.510.10 121 235 9.8E-14 T 29-03-2018 AL539_RS13215 540db6bd0b7de39e4013dadf308a9814 235 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 31 232 9.6E-67 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AL539_RS13215 540db6bd0b7de39e4013dadf308a9814 235 Gene3D G3DSA:3.30.200.20 15 120 6.0E-4 T 29-03-2018 AL539_RS13215 540db6bd0b7de39e4013dadf308a9814 235 SUPERFAMILY SSF56112 46 198 3.1E-18 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS13215 540db6bd0b7de39e4013dadf308a9814 235 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 41.175 T 29-03-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.1E-9 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.1E-9 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.1E-9 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 9.0E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 6.1E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 Gene3D G3DSA:3.30.1340.10 3 89 2.9E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL539_RS09960 06c10b8cd0db37c59bc3caf73a8da4e0 91 SUPERFAMILY SSF55594 4 90 7.07E-25 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS00625 604bbf19c4246fc552b05c04fdcacfc6 504 SUPERFAMILY SSF52540 4 473 1.93E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00625 604bbf19c4246fc552b05c04fdcacfc6 504 Gene3D G3DSA:3.40.50.300 254 499 6.3E-16 T 29-03-2018 AL539_RS00625 604bbf19c4246fc552b05c04fdcacfc6 504 Pfam PF13361 UvrD-like helicase C-terminal domain 361 470 1.4E-11 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL539_RS00625 604bbf19c4246fc552b05c04fdcacfc6 504 Gene3D G3DSA:3.40.50.300 7 250 1.5E-26 T 29-03-2018 AL539_RS00625 604bbf19c4246fc552b05c04fdcacfc6 504 Pfam PF00580 UvrD/REP helicase N-terminal domain 185 238 3.6E-10 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 Gene3D G3DSA:3.40.50.300 228 428 7.3E-44 T 29-03-2018 AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 3.3E-48 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 SMART SM00490 264 345 7.5E-31 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 SMART SM00487 24 227 3.4E-53 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 Pfam PF00271 Helicase conserved C-terminal domain 239 345 6.5E-30 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 Gene3D G3DSA:3.40.50.300 9 227 1.6E-57 T 29-03-2018 AL539_RS24050 b9fc70efb93f59b8a38ea4f22fec16f5 447 SUPERFAMILY SSF52540 77 363 1.05E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08470 5463ffe78b48661f2f00d5800cb5e08f 340 Gene3D G3DSA:2.40.160.10 5 340 8.4E-38 T 29-03-2018 AL539_RS08470 5463ffe78b48661f2f00d5800cb5e08f 340 SUPERFAMILY SSF56935 22 340 2.52E-52 T 29-03-2018 AL539_RS08470 5463ffe78b48661f2f00d5800cb5e08f 340 Pfam PF13609 Gram-negative porin 10 304 2.2E-25 T 29-03-2018 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 Gene3D G3DSA:3.30.420.10 2 159 2.7E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.737 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 SUPERFAMILY SSF53098 3 156 3.54E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-42 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-42 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-42 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-42 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.5E-42 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 29-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 8.6E-76 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS17770 90df06a3edb9e01e7be0940ead3e10b7 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.8E-63 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL539_RS22875 d160067f27beca4b53300c9e0b0b803f 330 SUPERFAMILY SSF50129 16 153 1.25E-24 T 29-03-2018 IPR011032 GroES-like AL539_RS22875 d160067f27beca4b53300c9e0b0b803f 330 SMART SM00829 18 328 9.5E-8 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS22875 d160067f27beca4b53300c9e0b0b803f 330 SUPERFAMILY SSF51735 124 289 8.18E-25 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS22875 d160067f27beca4b53300c9e0b0b803f 330 Gene3D G3DSA:3.40.50.720 143 312 4.5E-16 T 29-03-2018 AL539_RS22875 d160067f27beca4b53300c9e0b0b803f 330 Gene3D G3DSA:3.90.180.10 7 142 5.2E-24 T 29-03-2018 AL539_RS22875 d160067f27beca4b53300c9e0b0b803f 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 98 8.6E-7 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 4.8E-43 T 29-03-2018 IPR006512 YidE/YbjL duplication AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.2E-36 T 29-03-2018 IPR006512 YidE/YbjL duplication AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 1.3E-27 T 29-03-2018 IPR006512 YidE/YbjL duplication AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 4.7E-38 T 29-03-2018 IPR006512 YidE/YbjL duplication AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.629 T 29-03-2018 IPR023017 Transport protein YbjL, putative AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 Gene3D G3DSA:3.30.70.1450 299 378 5.8E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 SUPERFAMILY SSF116726 231 285 2.88E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS02030 03b5dcc63333d2f5b0cb8d7765d2f27a 560 Gene3D G3DSA:3.30.70.1450 220 294 2.5E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS21955 1173ede6d0c932a27074544b6deef8e2 331 Pfam PF13609 Gram-negative porin 9 330 3.7E-14 T 29-03-2018 AL539_RS21955 1173ede6d0c932a27074544b6deef8e2 331 Gene3D G3DSA:2.40.160.10 9 331 1.4E-30 T 29-03-2018 AL539_RS21955 1173ede6d0c932a27074544b6deef8e2 331 SUPERFAMILY SSF56935 22 331 1.04E-43 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 1.1E-149 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 Gene3D G3DSA:3.50.30.20 2 151 1.9E-63 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 SUPERFAMILY SSF52317 153 377 3.25E-63 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.1E-47 T 29-03-2018 IPR017926 Glutamine amidotransferase AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 SUPERFAMILY SSF52021 5 142 3.27E-57 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.697 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 SMART SM01097 3 133 2.8E-91 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 29-03-2018 AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 Gene3D G3DSA:3.40.50.880 152 379 1.3E-67 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS14630 dc9a7077caf19b18140c3ab232bf9f0b 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.6E-52 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 PIRSF PIRSF039144 1 112 1.1E-55 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 83 103 6.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 23 41 6.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 2 17 6.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 52 75 6.8E-41 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 SUPERFAMILY SSF54913 1 112 2.8E-45 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 Gene3D G3DSA:3.30.70.120 1 108 8.8E-49 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 SMART SM00938 4 105 2.3E-68 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS08600 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL539_RS03345 373f7fa3065bb581e99b95df8bc7ff65 432 Pfam PF04932 O-Antigen ligase 218 355 3.2E-19 T 29-03-2018 IPR007016 O-antigen ligase-related AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 Gene3D G3DSA:3.20.20.450 591 848 1.4E-88 T 29-03-2018 IPR001633 EAL domain AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 SMART SM00052 592 839 6.4E-101 T 29-03-2018 IPR001633 EAL domain AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 1.4E-31 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 Gene3D G3DSA:3.30.450.20 207 346 3.0E-16 T 29-03-2018 AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 SUPERFAMILY SSF158472 369 418 7.19E-7 T 29-03-2018 AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 SUPERFAMILY SSF141868 599 846 2.09E-82 T 29-03-2018 IPR001633 EAL domain AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 SMART SM00304 368 421 1.6E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 Pfam PF00563 EAL domain 599 834 1.1E-68 T 29-03-2018 IPR001633 EAL domain AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 Pfam PF02743 Cache domain 47 297 6.1E-25 T 29-03-2018 IPR033479 Double Cache domain 1 AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 SMART SM00267 416 582 3.6E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 Gene3D G3DSA:3.30.70.270 425 590 5.0E-37 T 29-03-2018 AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 SUPERFAMILY SSF55073 432 584 1.88E-32 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 Gene3D G3DSA:3.30.450.20 79 206 1.8E-20 T 29-03-2018 AL539_RS12810 fe41c0d98e4f2be9603600c2175a4408 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 425 574 9.8E-28 T 29-03-2018 IPR000160 GGDEF domain AL539_RS02180 8c3f300279717e84070fffb6daf44b80 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS02180 8c3f300279717e84070fffb6daf44b80 367 Pfam PF01259 SAICAR synthetase 22 293 7.3E-48 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS02180 8c3f300279717e84070fffb6daf44b80 367 Gene3D G3DSA:3.30.200.20 9 133 4.4E-28 T 29-03-2018 AL539_RS02180 8c3f300279717e84070fffb6daf44b80 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.509 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS02180 8c3f300279717e84070fffb6daf44b80 367 SUPERFAMILY SSF56104 14 344 2.65E-67 T 29-03-2018 AL539_RS02180 8c3f300279717e84070fffb6daf44b80 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 1.3E-215 T 29-03-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AL539_RS02180 8c3f300279717e84070fffb6daf44b80 367 Gene3D G3DSA:3.30.470.20 134 284 7.3E-40 T 29-03-2018 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 Pfam PF00186 Dihydrofolate reductase 3 159 2.9E-61 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.5E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.5E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.5E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.5E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 Gene3D G3DSA:3.40.430.10 1 160 3.8E-55 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 SUPERFAMILY SSF53597 1 159 1.14E-57 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL539_RS13950 ba7e468eaef88263ee8fabe13794582f 160 PIRSF PIRSF000194 1 160 1.7E-62 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL539_RS21480 7b4d11789cb2256563ad68ea3a50efed 265 Gene3D G3DSA:3.90.1210.10 140 205 7.5E-8 T 29-03-2018 AL539_RS21480 7b4d11789cb2256563ad68ea3a50efed 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 57 261 1.7E-42 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL539_RS21480 7b4d11789cb2256563ad68ea3a50efed 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 1.2E-38 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL539_RS21480 7b4d11789cb2256563ad68ea3a50efed 265 SMART SM00858 141 202 4.0E-7 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL539_RS14845 dc75fbbf67b4300a2cbb870d555b32b6 579 SUPERFAMILY SSF64182 45 464 7.72E-119 T 29-03-2018 AL539_RS14845 dc75fbbf67b4300a2cbb870d555b32b6 579 Pfam PF02272 DHHA1 domain 319 451 7.9E-27 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL539_RS14845 dc75fbbf67b4300a2cbb870d555b32b6 579 Pfam PF01368 DHH family 71 205 2.4E-9 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL539_RS14845 dc75fbbf67b4300a2cbb870d555b32b6 579 Gene3D G3DSA:3.90.1640.10 49 241 1.5E-23 T 29-03-2018 AL539_RS14845 dc75fbbf67b4300a2cbb870d555b32b6 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 1.2E-158 T 29-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AL539_RS18320 0d20c3e4611e108811c895e55d8bd692 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 8.8E-199 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AL539_RS18320 0d20c3e4611e108811c895e55d8bd692 706 Gene3D G3DSA:3.20.70.20 121 687 1.0E-204 T 29-03-2018 AL539_RS18320 0d20c3e4611e108811c895e55d8bd692 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_RS18320 0d20c3e4611e108811c895e55d8bd692 706 SUPERFAMILY SSF51998 121 687 2.2E-192 T 29-03-2018 AL539_RS18320 0d20c3e4611e108811c895e55d8bd692 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.6E-180 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AL539_RS18320 0d20c3e4611e108811c895e55d8bd692 706 Pfam PF03477 ATP cone domain 4 89 3.3E-22 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL539_RS05115 05ad7c0872f38f5ac394917a7d776410 126 SUPERFAMILY SSF52091 1 124 1.18E-37 T 29-03-2018 IPR002645 STAS domain AL539_RS05115 05ad7c0872f38f5ac394917a7d776410 126 Gene3D G3DSA:3.40.50.10600 1 126 4.0E-24 T 29-03-2018 AL539_RS05115 05ad7c0872f38f5ac394917a7d776410 126 Pfam PF11964 SpoIIAA-like 21 124 5.4E-18 T 29-03-2018 IPR021866 SpoIIAA-like AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 Gene3D G3DSA:3.10.20.30 383 458 4.3E-21 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 8.9E-271 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF81301 180 393 1.63E-59 T 29-03-2018 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 Gene3D G3DSA:3.30.70.260 626 706 2.1E-8 T 29-03-2018 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF55021 631 703 7.91E-7 T 29-03-2018 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 29-03-2018 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 Gene3D G3DSA:3.30.460.10 192 325 2.2E-39 T 29-03-2018 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 SMART SM00954 235 345 6.9E-59 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF13291 ACT domain 627 703 2.3E-14 T 29-03-2018 IPR002912 ACT domain AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 SMART SM00471 41 153 4.3E-11 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS13020 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.531 T 29-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 SMART SM00475 3 254 3.0E-70 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 SMART SM00279 167 202 7.7E-10 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 Gene3D G3DSA:1.10.150.20 178 255 1.5E-19 T 29-03-2018 AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 Gene3D G3DSA:3.40.50.1010 3 177 1.8E-43 T 29-03-2018 IPR029060 PIN domain-like AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 SUPERFAMILY SSF47807 164 258 4.49E-21 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 257 2.8E-23 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 SUPERFAMILY SSF88723 4 164 2.75E-39 T 29-03-2018 IPR029060 PIN domain-like AL539_RS15970 78ad1382f12e8e6fe7f8503e3273e8de 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 5.1E-31 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 SUPERFAMILY SSF52540 130 365 1.77E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 Pfam PF02954 Bacterial regulatory protein, Fis family 391 427 2.0E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 Gene3D G3DSA:1.10.10.60 370 436 2.2E-10 T 29-03-2018 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 150 163 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 SMART SM00382 146 289 2.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 Gene3D G3DSA:3.40.50.300 123 297 2.8E-28 T 29-03-2018 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 336 345 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 Gene3D G3DSA:1.10.8.60 299 366 2.2E-21 T 29-03-2018 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 Gene3D G3DSA:3.40.50.2300 1 122 3.0E-11 T 29-03-2018 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 SUPERFAMILY SSF46689 336 427 8.96E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 432 6.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 395 412 6.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 Pfam PF00158 Sigma-54 interaction domain 127 292 4.0E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS23715 f7354b0c49a56b60f36a3c168a8a1cfb 444 SUPERFAMILY SSF52172 2 171 4.84E-19 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.1E-28 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.7E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.7E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.7E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.8E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 SUPERFAMILY SSF55594 1 82 2.09E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS16540 cba350321ca53b6cdd691264bcdfdc81 85 Gene3D G3DSA:3.30.1340.10 1 85 9.7E-32 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS22065 65eed975ddb4c8bafb85136a84aad4ae 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.2E-29 T 29-03-2018 IPR021230 Protein of unknown function DUF2810 AL539_RS22065 65eed975ddb4c8bafb85136a84aad4ae 118 Gene3D G3DSA:1.20.120.330 1 93 9.1E-6 T 29-03-2018 AL539_RS13595 3469a8bf5a1216c2dcf4f84c3534da2b 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.591 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13595 3469a8bf5a1216c2dcf4f84c3534da2b 130 Pfam PF00410 Ribosomal protein S8 5 129 1.4E-46 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13595 3469a8bf5a1216c2dcf4f84c3534da2b 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13595 3469a8bf5a1216c2dcf4f84c3534da2b 130 Gene3D G3DSA:3.30.1490.10 74 129 6.5E-21 T 29-03-2018 AL539_RS13595 3469a8bf5a1216c2dcf4f84c3534da2b 130 SUPERFAMILY SSF56047 2 129 1.96E-43 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13595 3469a8bf5a1216c2dcf4f84c3534da2b 130 Gene3D G3DSA:3.30.1370.30 1 66 6.4E-22 T 29-03-2018 AL539_RS17010 91bb0f9d6978b2c6cb1f55d1626f694b 466 Gene3D G3DSA:3.40.50.980 155 302 3.3E-14 T 29-03-2018 AL539_RS17010 91bb0f9d6978b2c6cb1f55d1626f694b 466 Gene3D G3DSA:3.40.50.980 10 154 4.3E-11 T 29-03-2018 AL539_RS17010 91bb0f9d6978b2c6cb1f55d1626f694b 466 Pfam PF00501 AMP-binding enzyme 22 316 1.9E-17 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS17010 91bb0f9d6978b2c6cb1f55d1626f694b 466 Pfam PF13193 AMP-binding enzyme C-terminal domain 372 455 2.1E-7 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL539_RS17010 91bb0f9d6978b2c6cb1f55d1626f694b 466 Gene3D G3DSA:3.30.300.30 357 466 2.2E-17 T 29-03-2018 AL539_RS17010 91bb0f9d6978b2c6cb1f55d1626f694b 466 SUPERFAMILY SSF56801 17 465 1.96E-55 T 29-03-2018 AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 Gene3D G3DSA:3.30.70.270 222 393 8.8E-23 T 29-03-2018 AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 SMART SM00267 216 386 4.5E-8 T 29-03-2018 IPR000160 GGDEF domain AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 SMART SM00052 397 640 6.5E-15 T 29-03-2018 IPR001633 EAL domain AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 3.4E-10 T 29-03-2018 IPR000160 GGDEF domain AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 Gene3D G3DSA:3.20.20.450 394 657 2.4E-40 T 29-03-2018 IPR001633 EAL domain AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 Pfam PF00563 EAL domain 408 637 1.6E-50 T 29-03-2018 IPR001633 EAL domain AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 SUPERFAMILY SSF141868 409 638 3.01E-37 T 29-03-2018 IPR001633 EAL domain AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 3.2E-28 T 29-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 SUPERFAMILY SSF55073 233 386 1.1E-18 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS10060 438c2b56566a0c34b638db9bb5b893b7 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 1.1E-19 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03120 a506f45a50bce6374525c8f2be65d805 514 SUPERFAMILY SSF51998 24 464 1.74E-94 T 29-03-2018 AL539_RS03120 a506f45a50bce6374525c8f2be65d805 514 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 501 6.9E-229 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL539_RS03120 a506f45a50bce6374525c8f2be65d805 514 Gene3D G3DSA:3.20.70.20 162 473 3.7E-35 T 29-03-2018 AL539_RS03120 a506f45a50bce6374525c8f2be65d805 514 PIRSF PIRSF028991 4 513 1.2E-280 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL539_RS03120 a506f45a50bce6374525c8f2be65d805 514 Pfam PF11230 Protein of unknown function (DUF3029) 20 501 7.3E-225 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.6E-173 T 29-03-2018 AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 SUPERFAMILY SSF103088 158 287 2.09E-26 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 Gene3D G3DSA:3.30.1330.60 176 293 3.9E-27 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS06740 34ca2f234107150c4b48bd7ad348ccdf 293 Pfam PF00691 OmpA family 187 282 2.4E-20 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 2.5E-76 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 SUPERFAMILY SSF53613 1 302 5.92E-87 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 Gene3D G3DSA:3.40.1190.20 1 305 2.2E-87 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.9E-112 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 PRINTS PR00990 Ribokinase signature 33 52 9.4E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 PRINTS PR00990 Ribokinase signature 173 188 9.4E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 PRINTS PR00990 Ribokinase signature 217 228 9.4E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 PRINTS PR00990 Ribokinase signature 6 27 9.4E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 PRINTS PR00990 Ribokinase signature 105 118 9.4E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS19455 e644e08ba1727577eef640ac428ce303 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.241 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 SMART SM00267 192 364 4.5E-9 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 Gene3D G3DSA:3.30.450.40 12 180 1.0E-14 T 29-03-2018 IPR029016 GAF domain-like AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 358 2.0E-11 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 SUPERFAMILY SSF141868 378 626 7.32E-84 T 29-03-2018 IPR001633 EAL domain AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 2.5E-13 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 Pfam PF13185 GAF domain 56 143 5.2E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 SUPERFAMILY SSF55073 209 362 5.41E-17 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 Gene3D G3DSA:3.20.20.450 362 630 2.5E-87 T 29-03-2018 IPR001633 EAL domain AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 Gene3D G3DSA:3.30.70.270 186 360 7.0E-20 T 29-03-2018 AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 Pfam PF00563 EAL domain 381 613 3.6E-70 T 29-03-2018 IPR001633 EAL domain AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 SMART SM00052 373 618 4.3E-95 T 29-03-2018 IPR001633 EAL domain AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 SUPERFAMILY SSF55781 17 164 3.65E-20 T 29-03-2018 IPR029016 GAF domain-like AL539_RS18575 d9a9150cd3dd4018d88610b8a3724126 637 SMART SM00065 14 161 4.3E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 2.1E-59 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.8E-55 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 SUPERFAMILY SSF54611 4 143 3.71E-52 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 Gene3D G3DSA:3.10.420.10 3 154 9.9E-54 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS10780 05b68189b704e80d034d988047e28e46 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.146 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL539_RS21590 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 27 143 2.3E-12 T 29-03-2018 AL539_RS21590 593667284276d4c1df7adbe231ba26aa 336 SUPERFAMILY SSF53850 27 326 2.74E-63 T 29-03-2018 AL539_RS21590 593667284276d4c1df7adbe231ba26aa 336 PIRSF PIRSF002825 2 329 2.8E-79 T 29-03-2018 IPR026045 Ferric binding protein AL539_RS21590 593667284276d4c1df7adbe231ba26aa 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 1.4E-26 T 29-03-2018 AL539_RS21590 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 144 277 3.5E-25 T 29-03-2018 AL539_RS21590 593667284276d4c1df7adbe231ba26aa 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 1.9E-159 T 29-03-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 SUPERFAMILY SSF46785 1 81 8.41E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.0E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 Gene3D G3DSA:1.10.10.10 1 83 6.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 SUPERFAMILY SSF53850 91 279 1.45E-14 T 29-03-2018 AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 Pfam PF03466 LysR substrate binding domain 124 277 1.7E-8 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 Gene3D G3DSA:3.40.190.10 165 254 2.6E-4 T 29-03-2018 AL539_RS22500 118093e40fd57f2eadada7b46f5f3ea0 297 Gene3D G3DSA:3.40.190.10 87 164 9.9E-5 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82866 307 506 5.36E-33 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82866 808 1031 4.32E-48 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.2090.10 724 805 2.8E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82714 199 282 2.49E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.70.1430 55 159 3.1E-32 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82714 729 803 2.09E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 Pfam PF00873 AcrB/AcrD/AcrF family 19 1028 3.1E-173 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.2090.10 196 284 3.5E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82693 285 338 5.75E-18 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82693 151 197 5.75E-18 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:1.20.1640.10 818 1030 2.7E-41 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.70.1430 574 674 4.0E-13 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82693 55 150 4.88E-23 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:1.20.1640.10 298 519 7.7E-29 T 29-03-2018 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 1.3E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.3E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 1.3E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 1.3E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.3E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS01820 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.3E-25 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 SMART SM00846 3 150 1.6E-93 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 PIRSF PIRSF000149 1 331 3.7E-133 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 SUPERFAMILY SSF51735 3 166 3.58E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 SUPERFAMILY SSF55347 149 312 6.86E-77 T 29-03-2018 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.8E-134 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 Gene3D G3DSA:3.40.50.720 1 159 4.2E-78 T 29-03-2018 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.8E-68 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 Gene3D G3DSA:3.30.360.10 160 314 1.8E-77 T 29-03-2018 AL539_RS06910 a9683ebe94c81c8ef51a05ea21d5fc85 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.8E-40 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09800 c8ea70b4bb25fdab361a4f7e068be262 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 6.0E-68 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL539_RS09800 c8ea70b4bb25fdab361a4f7e068be262 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.7E-133 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82714 725 810 1.96E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Gene3D G3DSA:3.30.2090.10 182 274 5.9E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82866 299 500 4.32E-48 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Gene3D G3DSA:3.30.70.1440 675 769 8.5E-21 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82866 808 1035 6.28E-44 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.4E-89 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Gene3D G3DSA:3.30.70.1320 770 848 3.5E-8 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82693 39 132 9.42E-26 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Gene3D G3DSA:3.30.70.1430 567 674 1.2E-17 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82714 184 273 1.05E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Gene3D G3DSA:3.30.70.1430 39 141 2.0E-26 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82693 565 674 2.14E-22 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82693 136 183 1.01E-21 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 SUPERFAMILY SSF82693 276 332 1.01E-21 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Gene3D G3DSA:1.20.1640.10 275 502 1.0E-47 T 29-03-2018 AL539_RS20315 d59ddeeddaf0fd456c1aba2bff70edfd 1050 Gene3D G3DSA:1.20.1640.10 849 1043 4.3E-36 T 29-03-2018 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 3.1E-31 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 3.7E-130 T 29-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 SUPERFAMILY SSF48179 163 295 2.61E-39 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 SUPERFAMILY SSF51735 3 164 1.54E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 Gene3D G3DSA:1.10.1040.10 165 294 9.5E-31 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 3.8E-52 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 Gene3D G3DSA:3.40.50.720 1 164 2.6E-36 T 29-03-2018 AL539_RS19615 16f75f2291e849f4feaafb04dbe35003 298 PIRSF PIRSF000103 1 298 4.4E-82 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL539_RS25800 38165bab9a4e0783ed37472d72af8124 329 Gene3D G3DSA:3.20.20.140 11 326 1.5E-67 T 29-03-2018 AL539_RS25800 38165bab9a4e0783ed37472d72af8124 329 SUPERFAMILY SSF51556 4 246 9.07E-84 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS25800 38165bab9a4e0783ed37472d72af8124 329 SUPERFAMILY SSF51556 277 325 9.07E-84 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS25800 38165bab9a4e0783ed37472d72af8124 329 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 323 1.2E-72 T 29-03-2018 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Gene3D G3DSA:3.40.50.980 267 430 1.0E-36 T 29-03-2018 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 2.8E-25 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.391 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Gene3D G3DSA:2.30.38.10 431 516 3.3E-11 T 29-03-2018 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Gene3D G3DSA:3.30.300.30 519 649 9.0E-26 T 29-03-2018 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Gene3D G3DSA:3.40.50.980 74 266 1.8E-53 T 29-03-2018 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 Pfam PF00501 AMP-binding enzyme 83 523 2.4E-91 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS10990 36052616df61790d0dc8180d65908c5a 650 SUPERFAMILY SSF56801 9 644 1.57E-181 T 29-03-2018 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 4.3E-125 T 29-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF54814 201 278 7.85E-29 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF69705 1 126 4.71E-41 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.8E-8 T 29-03-2018 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.81 T 29-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF47794 429 492 1.73E-16 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF47794 356 415 1.44E-16 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SMART SM00316 133 198 9.4E-6 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:1.10.150.20 428 495 8.1E-15 T 29-03-2018 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:1.10.150.20 352 421 3.1E-15 T 29-03-2018 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 2.1E-18 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.9E-21 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF08529 NusA N-terminal domain 4 123 8.8E-36 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.300.20 199 276 4.5E-32 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.300.20 278 348 5.7E-13 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:2.40.50.140 135 198 9.1E-12 T 29-03-2018 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.1480.10 1 129 2.3E-44 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL539_RS08410 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 29-03-2018 IPR025249 KH domain, NusA-like GO:0003723 AL539_RS18160 7ffd67e89e16670cbf8d60b291b0a672 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 2.7E-147 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL539_RS18160 7ffd67e89e16670cbf8d60b291b0a672 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 7.2E-150 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL539_RS18160 7ffd67e89e16670cbf8d60b291b0a672 443 PIRSF PIRSF004539 1 441 3.6E-186 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.2E-35 T 29-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 1 118 3.02E-30 T 29-03-2018 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 1 123 9.5E-30 T 29-03-2018 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 245 366 3.93E-36 T 29-03-2018 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 SMART SM00480 17 362 1.5E-148 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.8E-109 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 PIRSF PIRSF000804 1 366 3.0E-118 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 124 247 4.8E-33 T 29-03-2018 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 2.2E-38 T 29-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.9E-38 T 29-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 248 366 1.0E-26 T 29-03-2018 AL539_RS12265 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 126 244 1.88E-28 T 29-03-2018 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 8.5E-74 T 29-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.904 T 29-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 Pfam PF14849 YidC periplasmic domain 65 339 8.0E-83 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.1E-110 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 5.1E-27 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 5.1E-27 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 5.1E-27 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 3.2E-99 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS12220 feeb105007cb9499bf11ba629a56cbcc 540 Pfam PF02096 60Kd inner membrane protein 351 530 9.6E-64 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 Pfam PF01472 PUA domain 286 360 6.6E-23 T 29-03-2018 IPR002478 PUA domain GO:0003723 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 PIRSF PIRSF000729 9 378 2.0E-136 T 29-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 Gene3D G3DSA:2.30.130.10 284 376 1.4E-27 T 29-03-2018 IPR002478 PUA domain GO:0003723 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.847 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 Pfam PF00696 Amino acid kinase family 15 243 1.0E-41 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.9E-53 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.9E-53 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.9E-53 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.9E-53 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.9E-53 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 29-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 SUPERFAMILY SSF53633 15 265 1.2E-64 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 SUPERFAMILY SSF88697 286 376 5.52E-25 T 29-03-2018 IPR015947 PUA-like domain AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 Gene3D G3DSA:3.40.1160.10 2 274 1.1E-59 T 29-03-2018 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 1.6E-147 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL539_RS15870 dcd03ad9943bfb1d37f32184bc18d4aa 379 SMART SM00359 286 369 1.5E-18 T 29-03-2018 IPR002478 PUA domain GO:0003723 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 Gene3D G3DSA:1.10.8.60 384 495 2.6E-20 T 29-03-2018 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 Pfam PF00158 Sigma-54 interaction domain 213 377 3.1E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 SUPERFAMILY SSF52540 214 450 1.82E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 SUPERFAMILY SSF46689 489 540 9.32E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 Pfam PF02954 Bacterial regulatory protein, Fis family 499 537 7.7E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 503 520 3.6E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 540 3.6E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 Pfam PF13185 GAF domain 26 148 2.5E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 Gene3D G3DSA:1.10.10.60 496 541 5.4E-13 T 29-03-2018 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 SMART SM00382 231 378 8.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 Gene3D G3DSA:3.40.50.300 208 383 7.2E-25 T 29-03-2018 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 SUPERFAMILY SSF55781 10 181 3.71E-14 T 29-03-2018 IPR029016 GAF domain-like AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 Gene3D G3DSA:3.30.450.40 2 207 7.9E-17 T 29-03-2018 IPR029016 GAF domain-like AL539_RS20040 6c6a62c3e1d89f493fca17fb43ad70d8 543 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 SMART SM00316 650 733 1.0E-14 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 Gene3D G3DSA:1.10.10.10 19 83 6.1E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.5E-11 T 29-03-2018 IPR013668 Ribonuclease R winged-helix domain AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 Pfam PF08206 Ribonuclease B OB domain 91 151 6.7E-22 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 SMART SM00357 90 152 6.0E-14 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 SUPERFAMILY SSF50249 651 742 3.43E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 Gene3D G3DSA:2.40.50.140 652 764 2.0E-22 T 29-03-2018 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.523 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 SUPERFAMILY SSF50249 71 154 1.8E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 4.8E-257 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 Pfam PF00773 RNB domain 267 594 1.5E-109 T 29-03-2018 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 SUPERFAMILY SSF50249 227 650 1.09E-144 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 SUPERFAMILY SSF50249 145 244 1.63E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 Pfam PF00575 S1 RNA binding domain 650 731 2.9E-13 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.6E-276 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL539_RS10600 bebfeadd4718b54bb92850172a52359f 835 SMART SM00955 267 595 2.1E-186 T 29-03-2018 AL539_RS07280 465fa476e4b1e87b5ed11d6d3b01a8f4 164 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 9.6E-23 T 29-03-2018 IPR021244 Protein of unknown function DUF2802 AL539_RS07280 465fa476e4b1e87b5ed11d6d3b01a8f4 164 Gene3D G3DSA:1.20.5.110 33 96 1.0E-4 T 29-03-2018 AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 Gene3D G3DSA:2.40.70.10 354 469 1.0E-7 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 Gene3D G3DSA:2.40.70.10 39 205 5.7E-39 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 Gene3D G3DSA:2.40.70.10 215 333 1.2E-20 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 Gene3D G3DSA:2.40.70.10 489 612 3.4E-34 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 SUPERFAMILY SSF50630 491 617 5.3E-32 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 Pfam PF05618 Putative ATP-dependant zinc protease 139 212 2.9E-5 T 29-03-2018 AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 Pfam PF05618 Putative ATP-dependant zinc protease 499 619 1.1E-24 T 29-03-2018 AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 SUPERFAMILY SSF50630 358 482 3.71E-11 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 SUPERFAMILY SSF50630 219 340 5.51E-19 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 SUPERFAMILY SSF50630 116 211 1.69E-22 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS12980 dda93b533f1620bc7ea020e77e793d88 626 SUPERFAMILY SSF50630 42 82 1.69E-22 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS24000 95a234eebebd0076415e22d6ed4ee856 126 PIRSF PIRSF028770 1 126 3.2E-72 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL539_RS24000 95a234eebebd0076415e22d6ed4ee856 126 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.3E-40 T 29-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 Gene3D G3DSA:3.30.1490.20 92 182 4.6E-14 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 Gene3D G3DSA:3.40.50.20 1 81 3.2E-17 T 29-03-2018 AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 Pfam PF02222 ATP-grasp domain 101 274 1.3E-51 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 SUPERFAMILY SSF52440 1 88 2.16E-16 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 SUPERFAMILY SSF56059 92 295 1.45E-55 T 29-03-2018 AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 SUPERFAMILY SSF51246 299 367 5.89E-19 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.457 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 Gene3D G3DSA:3.30.470.20 183 362 1.1E-32 T 29-03-2018 AL539_RS11985 c15c1c38b9dadfb3ff8a0481f5390095 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 6.1E-106 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 SUPERFAMILY SSF52540 351 601 3.22E-89 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 SMART SM00382 386 577 4.4E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 Pfam PF00664 ABC transporter transmembrane region 40 308 3.3E-17 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 Gene3D G3DSA:1.20.1560.10 11 347 1.1E-32 T 29-03-2018 AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 SUPERFAMILY SSF90123 28 347 1.57E-51 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 Gene3D G3DSA:3.40.50.300 349 605 1.9E-76 T 29-03-2018 AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS22850 1d82502d3c0c6efe8ca3381898a9d823 616 Pfam PF00005 ABC transporter 379 531 3.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 2.5E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SMART SM00387 381 494 4.7E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:1.10.287.130 273 330 2.6E-18 T 29-03-2018 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:3.30.565.10 338 503 4.7E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SMART SM00448 515 627 3.4E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 1.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 1.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 1.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 1.8E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF52172 515 651 1.99E-30 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:3.40.50.2300 508 650 1.4E-31 T 29-03-2018 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF47384 253 335 4.12E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:1.20.120.160 656 775 1.3E-11 T 29-03-2018 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF00072 Response regulator receiver domain 517 627 3.6E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SMART SM00388 269 334 8.8E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:3.30.450.20 154 272 0.003 T 29-03-2018 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF01627 Hpt domain 687 761 5.2E-5 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF55874 323 496 1.26E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 4.3E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF47226 664 759 2.75E-13 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS19545 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF47226 611 623 2.75E-13 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 SUPERFAMILY SSF50692 669 817 1.63E-42 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Gene3D G3DSA:2.40.40.20 657 813 5.4E-30 T 29-03-2018 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.8E-24 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Gene3D G3DSA:3.90.55.10 526 599 2.9E-20 T 29-03-2018 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Gene3D G3DSA:3.90.55.10 38 123 1.7E-13 T 29-03-2018 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 29-03-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Gene3D G3DSA:3.40.228.10 456 517 0.0084 T 29-03-2018 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 SUPERFAMILY SSF53706 40 660 8.38E-168 T 29-03-2018 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 4.1E-79 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Gene3D G3DSA:3.40.228.10 600 656 1.4E-6 T 29-03-2018 AL539_RS01740 aa36648b918f26ecdd636ed9ea9f8a85 820 Gene3D G3DSA:3.40.228.10 182 443 1.5E-55 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 2.1E-35 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 SUPERFAMILY SSF81653 266 362 1.7E-22 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 530 3.4E-94 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.0E-27 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 3.0E-27 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 3.0E-27 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 3.0E-27 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 3.0E-27 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 3.0E-27 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 Pfam PF00403 Heavy-metal-associated domain 77 127 1.1E-11 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 735 1.0E-82 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 1.1E-175 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 Gene3D G3DSA:3.30.70.100 72 140 9.2E-14 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 SUPERFAMILY SSF56784 462 481 5.33E-50 T 29-03-2018 IPR023214 HAD-like domain AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 SUPERFAMILY SSF56784 556 757 5.33E-50 T 29-03-2018 IPR023214 HAD-like domain AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 SUPERFAMILY SSF81665 706 745 7.72E-20 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 SUPERFAMILY SSF81665 363 457 7.72E-20 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 SUPERFAMILY SSF81665 215 266 7.72E-20 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 Gene3D G3DSA:3.40.1110.10 479 585 2.3E-23 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 Gene3D G3DSA:3.40.50.1000 586 724 2.2E-36 T 29-03-2018 IPR023214 HAD-like domain AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 1.1E-7 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 1.1E-7 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 1.1E-7 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 SUPERFAMILY SSF55008 75 141 1.31E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 Gene3D G3DSA:1.20.1110.10 145 478 2.1E-28 T 29-03-2018 AL539_RS17350 f289f849e8b3012aaa6bba3d35582694 768 Pfam PF00122 E1-E2 ATPase 263 443 5.4E-49 T 29-03-2018 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 SUPERFAMILY SSF48113 19 431 1.37E-152 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 SUPERFAMILY SSF48113 432 723 5.75E-113 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.256 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 Gene3D G3DSA:1.10.420.10 593 699 3.5E-39 T 29-03-2018 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 Gene3D G3DSA:1.10.420.10 232 399 4.5E-43 T 29-03-2018 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 Pfam PF00141 Peroxidase 406 698 5.7E-36 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 Pfam PF00141 Peroxidase 71 398 4.0E-50 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 3.6E-54 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 3.6E-54 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 3.6E-54 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 3.6E-54 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 3.6E-54 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 Gene3D G3DSA:1.10.520.10 56 214 3.0E-39 T 29-03-2018 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 29-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 Gene3D G3DSA:1.10.520.10 444 592 1.5E-35 T 29-03-2018 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 9.9E-17 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 9.9E-17 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 9.9E-17 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 9.9E-17 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS19090 690c3a7678649fbd25e9db3fba58ae40 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 9.9E-17 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL539_RS23025 9280bd4728c6049a4f1ef5b87e2d3c44 403 SUPERFAMILY SSF56059 92 321 1.0E-29 T 29-03-2018 AL539_RS23025 9280bd4728c6049a4f1ef5b87e2d3c44 403 Gene3D G3DSA:3.40.50.20 16 118 7.4E-4 T 29-03-2018 AL539_RS23025 9280bd4728c6049a4f1ef5b87e2d3c44 403 Gene3D G3DSA:3.30.470.20 119 394 6.4E-23 T 29-03-2018 AL539_RS25725 ff71b055ed275ab611854d80efa1feba 497 SUPERFAMILY SSF53720 2 484 1.31E-143 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS25725 ff71b055ed275ab611854d80efa1feba 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 1.3E-136 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS25725 ff71b055ed275ab611854d80efa1feba 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 2.5E-239 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AL539_RS25725 ff71b055ed275ab611854d80efa1feba 497 Gene3D G3DSA:3.40.309.10 264 459 4.7E-57 T 29-03-2018 AL539_RS25725 ff71b055ed275ab611854d80efa1feba 497 Gene3D G3DSA:3.40.605.10 1 263 2.1E-90 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS25725 ff71b055ed275ab611854d80efa1feba 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS22855 0fe551a6185a9c6095f6456ea42b222b 333 Pfam PF02274 Amidinotransferase 31 326 3.1E-63 T 29-03-2018 AL539_RS22855 0fe551a6185a9c6095f6456ea42b222b 333 SUPERFAMILY SSF55909 27 321 1.42E-38 T 29-03-2018 AL539_RS22855 0fe551a6185a9c6095f6456ea42b222b 333 Gene3D G3DSA:3.75.10.10 21 324 1.3E-40 T 29-03-2018 AL539_RS22855 0fe551a6185a9c6095f6456ea42b222b 333 PIRSF PIRSF028188 7 329 4.6E-156 T 29-03-2018 IPR014541 Predicted amidinotransferase, FN0238 type AL539_RS02455 3bfb7c3bcb7a934969a15e4254c37eb7 375 Gene3D G3DSA:3.40.50.150 89 364 1.7E-51 T 29-03-2018 AL539_RS02455 3bfb7c3bcb7a934969a15e4254c37eb7 375 Pfam PF05971 Protein of unknown function (DUF890) 55 364 4.4E-131 T 29-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AL539_RS02455 3bfb7c3bcb7a934969a15e4254c37eb7 375 SUPERFAMILY SSF53335 94 364 2.13E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS02455 3bfb7c3bcb7a934969a15e4254c37eb7 375 PIRSF PIRSF029038 45 375 2.9E-161 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL539_RS02455 3bfb7c3bcb7a934969a15e4254c37eb7 375 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 56 366 54.31 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 Gene3D G3DSA:3.40.50.2300 1 138 2.6E-27 T 29-03-2018 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 SMART SM00382 162 304 2.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 Pfam PF02954 Bacterial regulatory protein, Fis family 458 494 2.9E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 Gene3D G3DSA:1.10.10.60 384 498 6.5E-15 T 29-03-2018 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 Pfam PF00072 Response regulator receiver domain 5 114 1.8E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 Gene3D G3DSA:3.40.50.300 139 313 3.0E-25 T 29-03-2018 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 SUPERFAMILY SSF52172 3 186 6.12E-37 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 Gene3D G3DSA:1.10.8.60 314 383 1.2E-22 T 29-03-2018 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 SUPERFAMILY SSF52540 142 385 2.05E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 SMART SM00448 3 114 3.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 Pfam PF00158 Sigma-54 interaction domain 143 308 2.1E-68 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS03370 d5241837fb5495e2f15fc692c16b3d6c 508 SUPERFAMILY SSF46689 451 499 3.63E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22930 fa4b65d3e2cd10d212bc0feef96c1b61 152 SMART SM00347 39 137 4.1E-26 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS22930 fa4b65d3e2cd10d212bc0feef96c1b61 152 SUPERFAMILY SSF46785 11 151 5.07E-37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22930 fa4b65d3e2cd10d212bc0feef96c1b61 152 Pfam PF01047 MarR family 46 103 1.0E-16 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS22930 fa4b65d3e2cd10d212bc0feef96c1b61 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.4E-8 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS22930 fa4b65d3e2cd10d212bc0feef96c1b61 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.4E-8 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS22930 fa4b65d3e2cd10d212bc0feef96c1b61 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.4E-8 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS22930 fa4b65d3e2cd10d212bc0feef96c1b61 152 Gene3D G3DSA:1.10.10.10 2 152 8.3E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17405 f80447c7e0ca6d463609bf2a46487100 182 Pfam PF13302 Acetyltransferase (GNAT) domain 13 152 8.8E-22 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS17405 f80447c7e0ca6d463609bf2a46487100 182 Gene3D G3DSA:3.40.630.30 3 182 5.9E-27 T 29-03-2018 AL539_RS17405 f80447c7e0ca6d463609bf2a46487100 182 SUPERFAMILY SSF55729 3 177 3.06E-42 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 Gene3D G3DSA:3.40.50.300 23 186 2.1E-29 T 29-03-2018 AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 SUPERFAMILY SSF46785 262 332 2.09E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 Gene3D G3DSA:1.10.8.60 189 259 7.5E-32 T 29-03-2018 AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 SMART SM00382 56 189 2.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 9.7E-147 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 Gene3D G3DSA:1.10.10.10 262 332 4.3E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.604 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.7E-116 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.9E-33 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 1.0E-38 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL539_RS17780 144f58d72a224af5f9c47fb92bf5badf 334 SUPERFAMILY SSF52540 25 256 1.51E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 Gene3D G3DSA:2.40.50.100 46 331 2.7E-18 T 29-03-2018 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 Pfam PF13437 HlyD family secretion protein 295 396 1.3E-18 T 29-03-2018 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 ProSitePatterns PS00543 HlyD family secretion proteins signature. 401 423 - T 29-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 16 437 3.1E-108 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 416 3.6E-28 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 3.6E-28 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 328 3.6E-28 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 416 436 3.6E-28 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS03035 63ba968f64da662be416d90fa2865f65 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 3.6E-28 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 632 649 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 SMART SM00878 349 461 6.8E-47 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Gene3D G3DSA:2.40.50.100 605 677 4.4E-17 T 29-03-2018 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Pfam PF02785 Biotin carboxylase C-terminal domain 349 460 2.6E-36 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Gene3D G3DSA:3.40.50.20 14 141 7.3E-53 T 29-03-2018 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Gene3D G3DSA:3.30.470.20 217 464 3.7E-104 T 29-03-2018 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 299 306 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 335 9.6E-81 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 SUPERFAMILY SSF51230 599 675 1.44E-18 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 SUPERFAMILY SSF52440 13 126 3.6E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 166 180 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 SUPERFAMILY SSF51246 344 464 2.67E-35 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Pfam PF00364 Biotin-requiring enzyme 616 674 1.6E-14 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 SUPERFAMILY SSF56059 96 356 1.13E-69 T 29-03-2018 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Gene3D G3DSA:3.30.1490.20 142 214 1.2E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS19665 745daec80caac67cac598f7dbcde9526 695 Pfam PF00289 Biotin carboxylase, N-terminal domain 14 123 1.6E-44 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 Pfam PF00579 tRNA synthetases class I (W and Y) 11 292 4.2E-52 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 Gene3D G3DSA:1.10.240.10 224 329 2.8E-25 T 29-03-2018 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 5.0E-70 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.0E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.0E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.0E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.0E-21 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 Gene3D G3DSA:3.40.50.620 10 223 9.1E-57 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS01285 2c47ece53802c81f8fa052eb63ba721e 340 SUPERFAMILY SSF52374 12 337 3.94E-75 T 29-03-2018 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Gene3D G3DSA:2.60.40.1110 30 170 2.3E-24 T 29-03-2018 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Gene3D G3DSA:2.60.40.10 1101 1204 4.3E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Gene3D G3DSA:2.60.40.10 1215 1329 7.3E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Gene3D G3DSA:2.60.40.1180 999 1090 8.8E-40 T 29-03-2018 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Gene3D G3DSA:2.60.40.1130 181 296 1.6E-29 T 29-03-2018 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 SUPERFAMILY SSF81296 171 296 2.52E-30 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Gene3D G3DSA:3.20.20.80 410 998 6.0E-93 T 29-03-2018 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 4.5E-62 T 29-03-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 SUPERFAMILY SSF51445 407 975 7.18E-126 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 SUPERFAMILY SSF81296 1103 1153 1.29E-5 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 SMART SM00642 552 915 0.001 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 SUPERFAMILY SSF49452 18 171 8.5E-29 T 29-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 SUPERFAMILY SSF81296 309 412 2.8E-20 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Pfam PF03714 Bacterial pullanase-associated domain 51 171 3.8E-17 T 29-03-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 1.5E-12 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 29-03-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 SUPERFAMILY SSF51011 978 1092 1.44E-39 T 29-03-2018 AL539_RS23220 084f327912f3557821fb81cc1a0a2867 1329 Gene3D G3DSA:2.60.40.10 302 409 1.6E-22 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 Pfam PF00270 DEAD/DEAH box helicase 291 433 6.8E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 SMART SM00487 265 459 9.7E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 Pfam PF17191 RecG wedge domain 14 172 1.3E-21 T 29-03-2018 IPR033454 RecG, wedge domain AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 Gene3D G3DSA:3.40.50.300 457 630 1.1E-27 T 29-03-2018 AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 SUPERFAMILY SSF52540 508 653 4.05E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 SUPERFAMILY SSF52540 292 342 4.05E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 Gene3D G3DSA:3.40.50.300 254 456 5.1E-37 T 29-03-2018 AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 Gene3D G3DSA:2.40.50.140 54 143 2.7E-14 T 29-03-2018 AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 SUPERFAMILY SSF50249 8 174 3.77E-41 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 5.9E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 SUPERFAMILY SSF52540 195 453 1.47E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 Gene3D G3DSA:1.10.150.20 9 53 1.8E-4 T 29-03-2018 AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 SMART SM00490 505 589 1.2E-21 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS13010 cab0a96f1be85a17a8068c8f83d35012 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 1.7E-237 T 29-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AL539_RS07590 3c68045255bb015601d6804a9dc53bd6 218 SUPERFAMILY SSF53328 8 204 5.23E-66 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS07590 3c68045255bb015601d6804a9dc53bd6 218 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 197 2.4E-77 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL539_RS07590 3c68045255bb015601d6804a9dc53bd6 218 Gene3D G3DSA:3.40.50.170 1 207 7.6E-66 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS07590 3c68045255bb015601d6804a9dc53bd6 218 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 193 31.256 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL539_RS07590 3c68045255bb015601d6804a9dc53bd6 218 Pfam PF00551 Formyl transferase 7 186 9.2E-63 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS07590 3c68045255bb015601d6804a9dc53bd6 218 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 SMART SM01049 44 133 2.0E-31 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 SMART SM00283 295 556 2.6E-58 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 SUPERFAMILY SSF58104 248 557 5.23E-72 T 29-03-2018 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 Gene3D G3DSA:3.30.450.20 28 194 4.0E-44 T 29-03-2018 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 SMART SM00304 226 280 7.1E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 523 1.3E-38 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 Pfam PF00672 HAMP domain 229 276 1.5E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 Gene3D G3DSA:1.10.287.950 329 557 1.9E-50 T 29-03-2018 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 Gene3D G3DSA:1.10.287.950 195 328 0.001 T 29-03-2018 AL539_RS13150 fd343f33a49a0ef24710d4131729d7ef 557 Pfam PF17200 Single Cache domain 2 47 189 3.1E-37 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 SUPERFAMILY SSF56601 11 283 5.51E-84 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 3.8E-29 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 Gene3D G3DSA:2.60.410.10 303 373 2.8E-23 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 SUPERFAMILY SSF69189 283 375 3.34E-28 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 3.0E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 3.0E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 3.0E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 263 1.1E-93 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 SMART SM00936 283 373 1.4E-38 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS16075 6a700b6e50390b3c13e54d28b711786a 392 Gene3D G3DSA:3.40.710.10 7 302 2.7E-54 T 29-03-2018 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 SMART SM01230 102 379 3.7E-152 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 29-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 Gene3D G3DSA:3.30.590.10 105 457 1.1E-122 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.0E-137 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 SUPERFAMILY SSF55931 102 468 3.92E-137 T 29-03-2018 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 Gene3D G3DSA:3.10.20.70 2 104 5.3E-28 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 5.9E-211 T 29-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 29-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS12830 5744e8fb6973a06882de8a5774f70580 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 3.8E-19 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 9.8E-170 T 29-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 SUPERFAMILY SSF55804 506 645 2.22E-40 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 SUPERFAMILY SSF52794 385 472 2.75E-25 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 1.0E-33 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 6.8E-12 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 Gene3D G3DSA:3.40.930.10 504 648 3.8E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS14165 c3678d07c8fbeffc9eb05298fdd8b88d 650 Gene3D G3DSA:3.40.50.2300 371 476 8.8E-20 T 29-03-2018 AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 Gene3D G3DSA:2.60.120.10 22 137 9.0E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 Pfam PF00027 Cyclic nucleotide-binding domain 23 101 2.5E-9 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 2.0E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 SMART SM00387 329 440 1.8E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 SMART SM00100 2 124 6.2E-4 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 SUPERFAMILY SSF55874 293 437 3.93E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 Gene3D G3DSA:3.30.565.10 303 445 1.2E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 SUPERFAMILY SSF51206 13 132 5.11E-15 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 6.1E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 6.1E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.1E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.1E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03095 ddc0c5ea50aed6b380f61887e9765df0 445 Gene3D G3DSA:1.10.287.130 138 302 1.5E-5 T 29-03-2018 AL539_RS05875 57a298083bc8d96b93a25411c1786e6f 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 2.9E-30 T 29-03-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AL539_RS05875 57a298083bc8d96b93a25411c1786e6f 414 Gene3D G3DSA:3.30.360.10 150 343 6.9E-53 T 29-03-2018 AL539_RS05875 57a298083bc8d96b93a25411c1786e6f 414 Gene3D G3DSA:3.40.50.720 1 128 3.8E-9 T 29-03-2018 AL539_RS05875 57a298083bc8d96b93a25411c1786e6f 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 1.1E-32 T 29-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AL539_RS05875 57a298083bc8d96b93a25411c1786e6f 414 SUPERFAMILY SSF51735 3 179 2.5E-15 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 SUPERFAMILY SSF88659 102 173 2.83E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 Pfam PF04542 Sigma-70 region 2 28 101 1.2E-9 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 Gene3D G3DSA:1.10.10.10 171 242 3.6E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 Pfam PF04545 Sigma-70, region 4 189 236 8.5E-10 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 2.2E-25 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 Gene3D G3DSA:1.10.10.10 102 150 8.0E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 SUPERFAMILY SSF88659 162 240 2.09E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 4.6E-75 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 SUPERFAMILY SSF88946 22 100 7.06E-16 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23630 263e9a185307363fe20d79adc3ca77c8 242 Gene3D G3DSA:1.10.1740.10 20 98 5.7E-10 T 29-03-2018 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 92 105 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 PRINTS PR00046 Major sigma-70 factor signature 239 251 9.5E-20 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 PRINTS PR00046 Major sigma-70 factor signature 92 105 9.5E-20 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 PRINTS PR00046 Major sigma-70 factor signature 275 286 9.5E-20 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 PRINTS PR00046 Major sigma-70 factor signature 116 124 9.5E-20 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 PRINTS PR00046 Major sigma-70 factor signature 260 275 9.5E-20 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 290 7.4E-34 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 Gene3D G3DSA:1.10.10.10 229 292 8.5E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 Pfam PF00140 Sigma-70 factor, region 1.2 27 60 1.8E-8 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 SUPERFAMILY SSF88946 24 138 5.97E-40 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 Pfam PF04545 Sigma-70, region 4 236 288 1.7E-8 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 PIRSF PIRSF000770 1 293 1.8E-36 T 29-03-2018 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 Gene3D G3DSA:1.10.10.10 138 189 0.0054 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 SUPERFAMILY SSF88659 207 291 9.16E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 260 286 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 Gene3D G3DSA:1.10.601.10 10 137 5.6E-47 T 29-03-2018 AL539_RS25135 dfe2ee0a3189df57033b2fa3d1714de5 296 Pfam PF04542 Sigma-70 region 2 65 132 8.7E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS17455 27205c77817b1caac668a235f5eefb48 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.292 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL539_RS17455 27205c77817b1caac668a235f5eefb48 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 5.7E-111 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL539_RS17455 27205c77817b1caac668a235f5eefb48 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 6.4E-96 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AL539_RS17455 27205c77817b1caac668a235f5eefb48 335 Gene3D G3DSA:3.40.50.300 45 329 3.5E-5 T 29-03-2018 AL539_RS17455 27205c77817b1caac668a235f5eefb48 335 SUPERFAMILY SSF52540 50 160 2.05E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 SUPERFAMILY SSF56235 2 234 4.03E-76 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 7.5E-259 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.465 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 Gene3D G3DSA:3.40.50.10490 460 608 1.2E-49 T 29-03-2018 AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 SUPERFAMILY SSF53697 245 610 4.17E-113 T 29-03-2018 AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 1.1E-21 T 29-03-2018 AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 Gene3D G3DSA:3.60.20.10 2 239 4.3E-69 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14075 f547b1e91d720482b326006581b1adc5 610 Gene3D G3DSA:3.40.50.10490 240 459 1.3E-61 T 29-03-2018 AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SMART SM00267 246 410 1.4E-52 T 29-03-2018 IPR000160 GGDEF domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF141868 427 674 1.96E-84 T 29-03-2018 IPR001633 EAL domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF55073 258 412 2.75E-45 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Pfam PF08448 PAS fold 15 119 1.6E-6 T 29-03-2018 IPR013656 PAS fold-4 AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.30.70.270 254 418 1.3E-52 T 29-03-2018 AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Pfam PF13188 PAS domain 133 179 1.6E-4 T 29-03-2018 IPR000014 PAS domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Pfam PF00563 EAL domain 427 661 6.6E-73 T 29-03-2018 IPR001633 EAL domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SMART SM00091 8 74 0.0025 T 29-03-2018 IPR000014 PAS domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SMART SM00091 131 198 0.054 T 29-03-2018 IPR000014 PAS domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.30.450.20 3 122 5.7E-12 T 29-03-2018 AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 2.5E-42 T 29-03-2018 IPR000160 GGDEF domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF55785 115 210 2.84E-8 T 29-03-2018 IPR000014 PAS domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF55785 5 115 5.24E-10 T 29-03-2018 IPR000014 PAS domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 SMART SM00052 420 666 7.4E-108 T 29-03-2018 IPR001633 EAL domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 1.2E-7 T 29-03-2018 IPR000014 PAS domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 407 1.6E-36 T 29-03-2018 IPR000160 GGDEF domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.20.20.450 419 679 1.5E-96 T 29-03-2018 IPR001633 EAL domain AL539_RS08355 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.30.450.20 123 238 2.3E-9 T 29-03-2018 AL539_RS12600 4faec8e1e357321845ab0a9673870f84 292 SUPERFAMILY SSF103481 35 131 1.01E-5 T 29-03-2018 AL539_RS12600 4faec8e1e357321845ab0a9673870f84 292 SUPERFAMILY SSF103481 184 276 3.79E-6 T 29-03-2018 AL539_RS12600 4faec8e1e357321845ab0a9673870f84 292 Pfam PF00892 EamA-like transporter family 138 275 3.8E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS12600 4faec8e1e357321845ab0a9673870f84 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 1.9E-69 T 29-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AL539_RS23325 17eb4bc40bcb35b264c38810dd13fddb 124 PIRSF PIRSF031804 1 124 8.8E-42 T 29-03-2018 IPR016983 Uncharacterised conserved protein UCP031804 AL539_RS23325 17eb4bc40bcb35b264c38810dd13fddb 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 29-03-2018 IPR010652 Protein of unknown function DUF1232 AL539_RS23910 336e606452257b078b45700b4a26db12 677 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 29-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AL539_RS23910 336e606452257b078b45700b4a26db12 677 SUPERFAMILY SSF50993 1 408 1.07E-94 T 29-03-2018 AL539_RS23910 336e606452257b078b45700b4a26db12 677 Gene3D G3DSA:3.40.50.1820 1 675 3.1E-82 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23910 336e606452257b078b45700b4a26db12 677 Pfam PF00326 Prolyl oligopeptidase family 459 674 1.2E-69 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL539_RS23910 336e606452257b078b45700b4a26db12 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 5.0E-60 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS23910 336e606452257b078b45700b4a26db12 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 5.0E-60 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS23910 336e606452257b078b45700b4a26db12 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 5.0E-60 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS23910 336e606452257b078b45700b4a26db12 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 5.0E-60 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS23910 336e606452257b078b45700b4a26db12 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 5.0E-60 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS23910 336e606452257b078b45700b4a26db12 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 5.0E-60 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS23910 336e606452257b078b45700b4a26db12 677 SUPERFAMILY SSF53474 411 653 4.33E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23910 336e606452257b078b45700b4a26db12 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 6.5E-121 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL539_RS04050 7b7791b1cd9ada263e43356b71e42130 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 428 5.4E-117 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL539_RS04050 7b7791b1cd9ada263e43356b71e42130 437 Pfam PF02321 Outer membrane efflux protein 234 417 4.1E-25 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS04050 7b7791b1cd9ada263e43356b71e42130 437 Pfam PF02321 Outer membrane efflux protein 24 212 8.9E-26 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS04050 7b7791b1cd9ada263e43356b71e42130 437 Gene3D G3DSA:1.20.1600.10 22 427 3.5E-68 T 29-03-2018 AL539_RS04050 7b7791b1cd9ada263e43356b71e42130 437 SUPERFAMILY SSF56954 5 420 1.06E-89 T 29-03-2018 AL539_RS11545 8fe66c1fe47b65fa1db49ecd928b7cf4 156 Pfam PF01878 EVE domain 2 147 1.7E-57 T 29-03-2018 IPR002740 EVE domain AL539_RS11545 8fe66c1fe47b65fa1db49ecd928b7cf4 156 SUPERFAMILY SSF88697 1 149 6.68E-64 T 29-03-2018 IPR015947 PUA-like domain AL539_RS11545 8fe66c1fe47b65fa1db49ecd928b7cf4 156 Gene3D G3DSA:3.10.590.10 1 155 4.0E-63 T 29-03-2018 AL539_RS13645 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL539_RS13645 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 29-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13645 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS13645 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL539_RS13645 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL539_RS13645 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 29-03-2018 AL539_RS13645 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 101 1.6E-41 T 29-03-2018 AL539_RS13645 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 102 144 8.0E-16 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS13645 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL539_RS13645 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 145 206 1.3E-18 T 29-03-2018 AL539_RS13645 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS21730 b54bbf1b72da631704bcaa64f7634ab3 132 Gene3D G3DSA:2.20.25.10 1 29 3.5E-14 T 29-03-2018 AL539_RS21730 b54bbf1b72da631704bcaa64f7634ab3 132 Gene3D G3DSA:3.30.300.20 35 132 1.2E-16 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS21730 b54bbf1b72da631704bcaa64f7634ab3 132 SUPERFAMILY SSF82784 1 131 1.11E-38 T 29-03-2018 IPR003718 OsmC/Ohr family AL539_RS21730 b54bbf1b72da631704bcaa64f7634ab3 132 Pfam PF02566 OsmC-like protein 29 127 5.5E-17 T 29-03-2018 IPR003718 OsmC/Ohr family AL539_RS16670 e82e0f774789a31f0b4af877445885de 320 Gene3D G3DSA:3.40.50.1400 173 300 1.9E-45 T 29-03-2018 AL539_RS16670 e82e0f774789a31f0b4af877445885de 320 Pfam PF00762 Ferrochelatase 6 319 1.9E-112 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL539_RS16670 e82e0f774789a31f0b4af877445885de 320 Gene3D G3DSA:3.40.50.1400 1 172 3.6E-47 T 29-03-2018 AL539_RS16670 e82e0f774789a31f0b4af877445885de 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 320 1.0E-108 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL539_RS16670 e82e0f774789a31f0b4af877445885de 320 SUPERFAMILY SSF53800 4 319 1.14E-107 T 29-03-2018 AL539_RS16670 e82e0f774789a31f0b4af877445885de 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 29-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL539_RS16670 e82e0f774789a31f0b4af877445885de 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.918 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 29-03-2018 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 Gene3D G3DSA:3.40.50.2300 174 304 5.1E-25 T 29-03-2018 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 311 1.1E-138 T 29-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 Gene3D G3DSA:1.10.260.40 5 56 1.1E-20 T 29-03-2018 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 Gene3D G3DSA:3.40.50.2300 57 173 8.7E-23 T 29-03-2018 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 Pfam PF13377 Periplasmic binding protein-like domain 168 309 2.5E-16 T 29-03-2018 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 SUPERFAMILY SSF53822 63 306 3.53E-58 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 SMART SM00354 4 74 2.1E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS16025 08e7ba19a1a77a3716d91e67d52de981 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS11115 d2be8975b1485a40895fd41a952d55f1 520 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 3.2E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS11115 d2be8975b1485a40895fd41a952d55f1 520 Gene3D G3DSA:1.25.40.10 351 505 2.8E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS11115 d2be8975b1485a40895fd41a952d55f1 520 SUPERFAMILY SSF46894 6 103 6.52E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS11115 d2be8975b1485a40895fd41a952d55f1 520 SMART SM00862 24 100 1.9E-14 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS11115 d2be8975b1485a40895fd41a952d55f1 520 Gene3D G3DSA:1.10.10.10 4 107 2.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS03455 c8aa3975a33ebe9c13da7a45d5e9a80c 139 SUPERFAMILY SSF55811 7 124 2.3E-22 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS03455 c8aa3975a33ebe9c13da7a45d5e9a80c 139 Gene3D G3DSA:3.90.79.10 4 135 2.5E-21 T 29-03-2018 AL539_RS03455 c8aa3975a33ebe9c13da7a45d5e9a80c 139 PRINTS PR00502 NUDIX hydrolase family signature 31 45 4.5E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS03455 c8aa3975a33ebe9c13da7a45d5e9a80c 139 PRINTS PR00502 NUDIX hydrolase family signature 45 60 4.5E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS03455 c8aa3975a33ebe9c13da7a45d5e9a80c 139 Pfam PF00293 NUDIX domain 6 127 5.6E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS08500 6975a8eed44116d1e2be00305966bd5e 371 SUPERFAMILY SSF111369 68 283 1.83E-32 T 29-03-2018 AL539_RS08500 6975a8eed44116d1e2be00305966bd5e 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 278 4.3E-25 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS08500 6975a8eed44116d1e2be00305966bd5e 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 353 5.2E-50 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS08500 6975a8eed44116d1e2be00305966bd5e 371 Gene3D G3DSA:2.40.50.100 171 358 7.1E-8 T 29-03-2018 AL539_RS08500 6975a8eed44116d1e2be00305966bd5e 371 Gene3D G3DSA:2.40.50.100 79 170 2.6E-11 T 29-03-2018 AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.882 T 29-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 Gene3D G3DSA:3.40.50.300 1 228 2.9E-58 T 29-03-2018 AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 SMART SM00490 260 341 2.1E-31 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 6.2E-45 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 Pfam PF00271 Helicase conserved C-terminal domain 234 341 1.9E-31 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 SUPERFAMILY SSF52540 76 358 7.32E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 SMART SM00487 22 222 4.6E-55 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS14815 f0c79512740c1a004d2e0d6a7ef046a8 407 Gene3D G3DSA:3.40.50.300 229 386 8.9E-47 T 29-03-2018 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 SUPERFAMILY SSF63380 1 89 1.62E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 SUPERFAMILY SSF63380 93 198 7.14E-33 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 PIRSF PIRSF000498 1 211 1.4E-80 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 Gene3D G3DSA:2.40.30.20 94 191 2.6E-34 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.5E-66 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 Gene3D G3DSA:2.40.30.20 1 89 2.7E-26 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 Pfam PF00677 Lumazine binding domain 100 184 3.2E-24 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15890 7554839ad833eeb2431d4d5aeb519ac3 217 Pfam PF00677 Lumazine binding domain 3 87 4.2E-21 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 Gene3D G3DSA:3.40.720.10 9 525 5.8E-123 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 Pfam PF00245 Alkaline phosphatase 26 503 9.9E-84 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 29-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 SMART SM00098 27 415 8.5E-52 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 SUPERFAMILY SSF53649 9 401 4.13E-114 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 SUPERFAMILY SSF53649 466 504 4.13E-114 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 3.2E-37 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 3.2E-37 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 3.2E-37 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 3.2E-37 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS06945 38f17e6a2f21f17ad75077adfb5037a5 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 3.2E-37 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL539_RS08925 89af00ca96d2d2dbd6b6ce8233adb6cf 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 158 2.1E-51 T 29-03-2018 IPR008136 CinA, C-terminal AL539_RS08925 89af00ca96d2d2dbd6b6ce8233adb6cf 160 SUPERFAMILY SSF142433 4 159 6.41E-56 T 29-03-2018 IPR008136 CinA, C-terminal AL539_RS08925 89af00ca96d2d2dbd6b6ce8233adb6cf 160 Pfam PF02464 Competence-damaged protein 5 158 7.7E-58 T 29-03-2018 IPR008136 CinA, C-terminal AL539_RS08925 89af00ca96d2d2dbd6b6ce8233adb6cf 160 Gene3D G3DSA:3.90.950.20 1 160 2.7E-57 T 29-03-2018 AL539_RS14975 7952f38483eb0c6f96a35e83367b1829 556 Gene3D G3DSA:3.30.450.40 226 369 1.7E-6 T 29-03-2018 IPR029016 GAF domain-like AL539_RS14975 7952f38483eb0c6f96a35e83367b1829 556 SUPERFAMILY SSF55781 227 351 6.13E-8 T 29-03-2018 IPR029016 GAF domain-like AL539_RS14975 7952f38483eb0c6f96a35e83367b1829 556 SUPERFAMILY SSF55874 420 553 6.16E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14975 7952f38483eb0c6f96a35e83367b1829 556 Pfam PF13492 GAF domain 241 351 7.7E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS14975 7952f38483eb0c6f96a35e83367b1829 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 5.0E-59 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AL539_RS14975 7952f38483eb0c6f96a35e83367b1829 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL539_RS14975 7952f38483eb0c6f96a35e83367b1829 556 Gene3D G3DSA:3.30.565.10 380 554 1.8E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06285 0b3b3665ee5fc482d708a29ab395bb21 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 3.1E-51 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS06285 0b3b3665ee5fc482d708a29ab395bb21 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 2.1E-58 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS06285 0b3b3665ee5fc482d708a29ab395bb21 233 Gene3D G3DSA:3.20.20.70 1 231 1.8E-69 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS06285 0b3b3665ee5fc482d708a29ab395bb21 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.317 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS06285 0b3b3665ee5fc482d708a29ab395bb21 233 SUPERFAMILY SSF51366 1 229 2.12E-77 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL539_RS06285 0b3b3665ee5fc482d708a29ab395bb21 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 29-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS06285 0b3b3665ee5fc482d708a29ab395bb21 233 SMART SM00934 5 226 1.6E-101 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 8.4E-23 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 Gene3D G3DSA:2.40.30.10 1 102 7.3E-15 T 29-03-2018 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 Gene3D G3DSA:3.40.50.80 103 237 1.0E-23 T 29-03-2018 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 SUPERFAMILY SSF52343 104 235 1.18E-34 T 29-03-2018 AL539_RS11660 c2be4e014ac8579b9dec09fc492f09cf 237 SUPERFAMILY SSF63380 2 101 2.37E-17 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS04175 87e778e4121c82004bb724002d103dc6 330 SUPERFAMILY SSF51735 116 266 5.92E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS04175 87e778e4121c82004bb724002d103dc6 330 Gene3D G3DSA:3.90.180.10 1 219 6.7E-53 T 29-03-2018 AL539_RS04175 87e778e4121c82004bb724002d103dc6 330 SUPERFAMILY SSF50129 1 142 8.22E-28 T 29-03-2018 IPR011032 GroES-like AL539_RS04175 87e778e4121c82004bb724002d103dc6 330 Gene3D G3DSA:3.90.180.10 237 329 0.0026 T 29-03-2018 AL539_RS04175 87e778e4121c82004bb724002d103dc6 330 Pfam PF00107 Zinc-binding dehydrogenase 154 243 1.3E-20 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL539_RS04175 87e778e4121c82004bb724002d103dc6 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 1.2E-7 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS04175 87e778e4121c82004bb724002d103dc6 330 SMART SM00829 8 325 2.0E-14 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS16315 4f29f8687512816acb1740ba841ce3d6 283 Gene3D G3DSA:3.20.20.70 16 280 1.4E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS16315 4f29f8687512816acb1740ba841ce3d6 283 Pfam PF00793 DAHP synthetase I family 10 275 6.0E-70 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL539_RS16315 4f29f8687512816acb1740ba841ce3d6 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.193 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL539_RS16315 4f29f8687512816acb1740ba841ce3d6 283 SUPERFAMILY SSF51569 2 278 3.94E-104 T 29-03-2018 AL539_RS16315 4f29f8687512816acb1740ba841ce3d6 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.0E-116 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL539_RS25485 f8b484a4367799315bc039e67b360307 328 SUPERFAMILY SSF52540 4 171 8.94E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25485 f8b484a4367799315bc039e67b360307 328 SMART SM00833 241 324 0.0046 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_RS25485 f8b484a4367799315bc039e67b360307 328 Gene3D G3DSA:3.40.50.300 2 200 2.2E-28 T 29-03-2018 AL539_RS25485 f8b484a4367799315bc039e67b360307 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 1.7E-42 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL539_RS16310 8eb785e971d13faed9ef48f1ab702c83 269 Gene3D G3DSA:1.25.40.10 163 264 7.8E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS16310 8eb785e971d13faed9ef48f1ab702c83 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 1.6E-44 T 29-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL539_RS16310 8eb785e971d13faed9ef48f1ab702c83 269 Pfam PF13371 Tetratricopeptide repeat 187 259 5.1E-24 T 29-03-2018 AL539_RS10250 2f24854a804ab6b403545cb928bd4d04 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.312 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL539_RS10250 2f24854a804ab6b403545cb928bd4d04 100 PIRSF PIRSF003135 1 100 8.3E-45 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL539_RS10250 2f24854a804ab6b403545cb928bd4d04 100 Pfam PF00436 Single-strand binding protein family 3 88 1.1E-6 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL539_RS10250 2f24854a804ab6b403545cb928bd4d04 100 SUPERFAMILY SSF50249 1 99 1.17E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10250 2f24854a804ab6b403545cb928bd4d04 100 Gene3D G3DSA:2.40.50.140 1 100 1.1E-8 T 29-03-2018 AL539_RS10250 2f24854a804ab6b403545cb928bd4d04 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 1.9E-30 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 SMART SM00862 148 224 2.6E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 9.8E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 Gene3D G3DSA:1.10.10.10 126 231 4.9E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 SUPERFAMILY SSF46894 131 225 1.19E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 Gene3D G3DSA:3.40.50.2300 2 125 7.8E-31 T 29-03-2018 AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 Pfam PF00072 Response regulator receiver domain 5 114 4.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 SMART SM00448 3 113 2.1E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS24210 c1a8dcad68fe2d35df3b12e1ef701f28 232 SUPERFAMILY SSF52172 3 163 2.13E-35 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS20815 e2a713c7315ad2f97e3c4b7391d8ac05 457 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 4.2E-10 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain AL539_RS20815 e2a713c7315ad2f97e3c4b7391d8ac05 457 Pfam PF02264 LamB porin 58 457 2.0E-96 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL539_RS20815 e2a713c7315ad2f97e3c4b7391d8ac05 457 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 62 453 2.0E-110 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL539_RS20815 e2a713c7315ad2f97e3c4b7391d8ac05 457 Gene3D G3DSA:2.40.170.10 57 457 4.3E-106 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 AL539_RS20815 e2a713c7315ad2f97e3c4b7391d8ac05 457 SUPERFAMILY SSF56935 56 457 1.28E-105 T 29-03-2018 AL539_RS20815 e2a713c7315ad2f97e3c4b7391d8ac05 457 Gene3D G3DSA:1.20.5.1070 21 56 0.0045 T 29-03-2018 AL539_RS23140 96abe455da8a6be885f72549fa727f5b 249 SUPERFAMILY SSF51621 5 245 5.93E-64 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS23140 96abe455da8a6be885f72549fa727f5b 249 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 237 1.6E-33 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL539_RS23140 96abe455da8a6be885f72549fa727f5b 249 Gene3D G3DSA:3.20.20.60 1 246 5.5E-39 T 29-03-2018 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 Pfam PF00460 Flagella basal body rod protein 5 33 6.3E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 Gene3D G3DSA:1.20.1420.10 87 371 5.3E-4 T 29-03-2018 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 4.8E-117 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 409 456 5.4E-7 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.9E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 1.9E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.9E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.9E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.9E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS21430 8c196dcab9957b65095121ff3a594e58 457 SUPERFAMILY SSF64518 133 457 2.75E-26 T 29-03-2018 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 29-03-2018 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 1.1E-122 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 Gene3D G3DSA:3.30.70.260 284 373 3.4E-21 T 29-03-2018 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 Pfam PF00696 Amino acid kinase family 6 278 2.5E-46 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 PIRSF PIRSF000726 2 450 3.6E-129 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 SUPERFAMILY SSF55021 377 449 9.16E-15 T 29-03-2018 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 2.5E-122 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 SUPERFAMILY SSF53633 6 293 3.14E-76 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 Gene3D G3DSA:3.30.70.260 374 449 7.1E-17 T 29-03-2018 AL539_RS10100 3c2b8243b2dcf1a3229b14c64235f8f5 450 Gene3D G3DSA:3.40.1160.10 1 283 3.1E-65 T 29-03-2018 AL539_RS12680 b13c57881c5639c93d3115d603d29384 356 Pfam PF01594 AI-2E family transporter 17 333 3.2E-46 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AL539_RS19250 14a22668d7cc154be0af1558ba80639a 215 Gene3D G3DSA:2.40.160.20 4 215 4.6E-21 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS19250 14a22668d7cc154be0af1558ba80639a 215 Pfam PF13505 Outer membrane protein beta-barrel domain 5 215 7.8E-17 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS19250 14a22668d7cc154be0af1558ba80639a 215 SUPERFAMILY SSF56925 20 215 9.42E-23 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS19250 14a22668d7cc154be0af1558ba80639a 215 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 147 215 4.1E-4 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL539_RS07635 d59ecd067d8a1c1f2e385aeff7f443d8 240 Gene3D G3DSA:3.30.420.10 1 191 1.2E-38 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS07635 d59ecd067d8a1c1f2e385aeff7f443d8 240 SMART SM00479 11 189 5.4E-51 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS07635 d59ecd067d8a1c1f2e385aeff7f443d8 240 Pfam PF00929 Exonuclease 13 180 7.5E-38 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS07635 d59ecd067d8a1c1f2e385aeff7f443d8 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 2.3E-95 T 29-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS07635 d59ecd067d8a1c1f2e385aeff7f443d8 240 SUPERFAMILY SSF53098 11 190 2.6E-53 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS07635 d59ecd067d8a1c1f2e385aeff7f443d8 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 3.8E-80 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS24085 aa48b1ea498853260350b4c04b036794 273 Gene3D G3DSA:3.40.190.10 148 273 3.3E-22 T 29-03-2018 AL539_RS24085 aa48b1ea498853260350b4c04b036794 273 SUPERFAMILY SSF53850 16 273 8.43E-72 T 29-03-2018 AL539_RS24085 aa48b1ea498853260350b4c04b036794 273 Gene3D G3DSA:3.40.190.10 24 147 1.0E-35 T 29-03-2018 AL539_RS24085 aa48b1ea498853260350b4c04b036794 273 Pfam PF12849 PBP superfamily domain 23 259 1.5E-39 T 29-03-2018 IPR024370 PBP domain AL539_RS24085 aa48b1ea498853260350b4c04b036794 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 1.2E-75 T 29-03-2018 IPR011862 Phosphate binding protein GO:0006810 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 Gene3D G3DSA:2.40.40.20 637 770 6.7E-21 T 29-03-2018 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 7.8E-8 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 Gene3D G3DSA:3.40.50.740 330 604 1.7E-46 T 29-03-2018 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 SUPERFAMILY SSF53706 48 631 1.44E-150 T 29-03-2018 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 Gene3D G3DSA:3.40.50.740 111 277 4.1E-39 T 29-03-2018 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 PIRSF PIRSF000144 1 767 0.0 T 29-03-2018 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 SUPERFAMILY SSF50692 645 764 1.94E-16 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 8.4E-293 T 29-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AL539_RS18265 98d4b5ef30dfc4284a2acfa321b5ecbb 774 Pfam PF00384 Molybdopterin oxidoreductase 110 492 4.1E-25 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS00105 ee3efc1e71b9a52a3180073e36cdadef 622 SUPERFAMILY SSF52540 374 614 7.58E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00105 ee3efc1e71b9a52a3180073e36cdadef 622 SUPERFAMILY SSF52540 146 327 7.58E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00105 ee3efc1e71b9a52a3180073e36cdadef 622 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 10 620 1.0E-223 T 29-03-2018 IPR022458 Conjugative coupling factor TraG/TraD AL539_RS00105 ee3efc1e71b9a52a3180073e36cdadef 622 Gene3D G3DSA:3.40.50.300 79 622 9.2E-29 T 29-03-2018 AL539_RS00105 ee3efc1e71b9a52a3180073e36cdadef 622 Pfam PF12846 AAA-like domain 170 259 2.5E-9 T 29-03-2018 AL539_RS00105 ee3efc1e71b9a52a3180073e36cdadef 622 Pfam PF12696 TraM recognition site of TraD and TraG 472 593 2.0E-12 T 29-03-2018 IPR032689 TraD/TraG, TraM recognition site AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 3.5E-33 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 PIRSF PIRSF002741 422 583 0.028 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 PIRSF PIRSF002741 90 365 1.0E-29 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 SUPERFAMILY SSF53850 117 583 5.25E-63 T 29-03-2018 AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 312 5.2E-21 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 Gene3D G3DSA:3.10.105.10 361 556 7.5E-4 T 29-03-2018 AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 Gene3D G3DSA:3.40.190.10 242 352 5.2E-7 T 29-03-2018 AL539_RS24885 3085b517e890a37b6078cfb2c262cbde 585 Gene3D G3DSA:3.90.76.10 145 241 7.7E-20 T 29-03-2018 AL539_RS14565 28d5ea4d7c66979f9277801401852bda 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS14565 28d5ea4d7c66979f9277801401852bda 360 Pfam PF00953 Glycosyl transferase family 4 99 283 4.0E-37 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL539_RS14565 28d5ea4d7c66979f9277801401852bda 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.421 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS14565 28d5ea4d7c66979f9277801401852bda 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS14565 28d5ea4d7c66979f9277801401852bda 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.1E-157 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS14565 28d5ea4d7c66979f9277801401852bda 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 Gene3D G3DSA:3.40.50.2300 2 133 2.7E-38 T 29-03-2018 AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 SUPERFAMILY SSF46894 132 234 1.47E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 Gene3D G3DSA:1.10.10.10 134 239 1.0E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.0E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 SMART SM00862 156 232 1.9E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 SMART SM00448 5 116 3.8E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS12995 ba7e60a4d2227af29616cee2b108aaf7 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS14135 a547d7e0062ef8a795e43bb50a1cdcd1 352 Pfam PF02733 Dak1 domain 17 348 1.1E-124 T 29-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AL539_RS14135 a547d7e0062ef8a795e43bb50a1cdcd1 352 SUPERFAMILY SSF82549 10 352 3.4E-124 T 29-03-2018 AL539_RS14135 a547d7e0062ef8a795e43bb50a1cdcd1 352 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 349 2.8E-142 T 29-03-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 AL539_RS14135 a547d7e0062ef8a795e43bb50a1cdcd1 352 Gene3D G3DSA:3.40.50.10440 11 181 1.0E-64 T 29-03-2018 AL539_RS14135 a547d7e0062ef8a795e43bb50a1cdcd1 352 Gene3D G3DSA:3.30.1180.20 182 352 1.4E-50 T 29-03-2018 AL539_RS14130 df074b211fb640ad805a3b4ed1611e56 360 SUPERFAMILY SSF56796 3 356 7.59E-92 T 29-03-2018 AL539_RS14130 df074b211fb640ad805a3b4ed1611e56 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL539_RS14130 df074b211fb640ad805a3b4ed1611e56 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 4.6E-69 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL539_RS14130 df074b211fb640ad805a3b4ed1611e56 360 Gene3D G3DSA:3.40.50.1970 3 159 5.5E-36 T 29-03-2018 AL539_RS14130 df074b211fb640ad805a3b4ed1611e56 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL539_RS14130 df074b211fb640ad805a3b4ed1611e56 360 PIRSF PIRSF000112 1 360 2.6E-94 T 29-03-2018 AL539_RS14130 df074b211fb640ad805a3b4ed1611e56 360 Gene3D G3DSA:1.20.1090.10 160 360 1.6E-40 T 29-03-2018 AL539_RS19255 ffb45356fb117030c8d892c86eebb01b 111 Pfam PF04076 Bacterial OB fold (BOF) protein 19 110 6.5E-30 T 29-03-2018 IPR005220 Bacterial OB-fold AL539_RS19255 ffb45356fb117030c8d892c86eebb01b 111 SUPERFAMILY SSF101756 7 110 1.12E-33 T 29-03-2018 IPR005220 Bacterial OB-fold AL539_RS19255 ffb45356fb117030c8d892c86eebb01b 111 Gene3D G3DSA:2.40.50.200 12 110 3.0E-30 T 29-03-2018 AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 SUPERFAMILY SSF48029 12 112 1.96E-17 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 Pfam PF14841 FliG middle domain 121 194 1.2E-19 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 8.6E-28 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 8.6E-28 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 8.6E-28 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 8.6E-28 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 8.6E-28 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 8.6E-28 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 SUPERFAMILY SSF48029 120 328 1.44E-52 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 Gene3D G3DSA:1.10.220.30 11 74 3.1E-9 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 Pfam PF01706 FliG C-terminal domain 222 328 3.1E-24 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 Gene3D G3DSA:1.10.220.30 75 200 1.4E-14 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 Gene3D G3DSA:1.10.220.30 201 335 1.1E-14 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS23730 0b235c6ac959ae971089e03475fdeb2b 337 Pfam PF14842 FliG N-terminal domain 10 107 2.1E-22 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 Pfam PF02780 Transketolase, C-terminal domain 544 655 4.8E-21 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.4E-166 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 Gene3D G3DSA:3.40.50.920 541 662 1.7E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 SUPERFAMILY SSF52518 6 329 3.48E-119 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.3E-46 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 Gene3D G3DSA:3.40.50.970 364 540 1.2E-41 T 29-03-2018 AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 Gene3D G3DSA:3.40.50.970 1 363 2.7E-127 T 29-03-2018 AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 SMART SM00861 354 525 3.7E-64 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 SUPERFAMILY SSF52518 333 526 2.61E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS09200 06280f77d7edddb0ea4997ddfa9f5a8c 664 SUPERFAMILY SSF52922 533 664 3.53E-45 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.8E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.8E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.8E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.8E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.8E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.8E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 SUPERFAMILY SSF51905 324 386 4.32E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 SUPERFAMILY SSF51905 15 272 4.32E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 Gene3D G3DSA:3.30.9.10 196 332 1.6E-40 T 29-03-2018 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 Gene3D G3DSA:3.30.9.10 95 195 1.4E-16 T 29-03-2018 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 9.2E-48 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 Gene3D G3DSA:3.40.50.720 2 85 5.9E-4 T 29-03-2018 AL539_RS08175 f00ccd31feee60e377953b9b483af095 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 501 1.8E-11 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AL539_RS04115 f301373906ba22ad17ded9b9eb556fe5 230 Pfam PF00106 short chain dehydrogenase 3 192 1.6E-33 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS04115 f301373906ba22ad17ded9b9eb556fe5 230 SUPERFAMILY SSF51735 1 230 1.25E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS04115 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.9E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS04115 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.9E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS04115 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.9E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS04115 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 6.9E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS04115 f301373906ba22ad17ded9b9eb556fe5 230 Gene3D G3DSA:3.40.50.720 1 230 2.3E-50 T 29-03-2018 AL539_RS02035 71d047e8aa4bb4faed43c9ea9c23ecfd 88 SUPERFAMILY SSF52833 3 81 5.39E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS02035 71d047e8aa4bb4faed43c9ea9c23ecfd 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.5E-46 T 29-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AL539_RS02035 71d047e8aa4bb4faed43c9ea9c23ecfd 88 Pfam PF00462 Glutaredoxin 3 69 4.7E-16 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL539_RS02035 71d047e8aa4bb4faed43c9ea9c23ecfd 88 Gene3D G3DSA:3.40.30.10 2 80 2.6E-21 T 29-03-2018 AL539_RS02035 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 3 21 4.5E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS02035 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 66 79 4.5E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS02035 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 52 65 4.5E-11 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 7.0E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 7.0E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 7.0E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 7.0E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 7.0E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 7.0E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Gene3D G3DSA:2.40.50.140 582 691 8.2E-31 T 29-03-2018 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 13 540 6.5E-202 T 29-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.568 T 29-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 SUPERFAMILY SSF50249 590 690 4.9E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Pfam PF01588 Putative tRNA binding domain 596 688 6.5E-26 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Gene3D G3DSA:2.170.220.10 186 253 3.8E-14 T 29-03-2018 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Gene3D G3DSA:2.20.28.20 147 180 1.2E-16 T 29-03-2018 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 SUPERFAMILY SSF47323 394 552 6.32E-45 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Pfam PF09334 tRNA synthetases class I (M) 13 401 1.8E-165 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 SUPERFAMILY SSF57770 147 181 4.32E-13 T 29-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Gene3D G3DSA:3.40.50.620 254 374 1.5E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 559 690 7.5E-47 T 29-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 SUPERFAMILY SSF52374 10 146 2.1E-101 T 29-03-2018 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 SUPERFAMILY SSF52374 181 392 2.1E-101 T 29-03-2018 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Gene3D G3DSA:1.10.730.10 378 541 7.5E-35 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS06510 926cf7d2ebffd04b033286d27724d0c8 691 Gene3D G3DSA:3.40.50.620 9 82 3.0E-21 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.7E-88 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 SUPERFAMILY SSF53335 8 267 5.31E-80 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 Gene3D G3DSA:1.10.8.100 202 263 2.6E-20 T 29-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.519 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 SMART SM00650 25 197 5.2E-89 T 29-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 5.8E-78 T 29-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 29-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AL539_RS13965 9dd6db9b2052e138739433ba7b4c3534 269 Gene3D G3DSA:3.40.50.150 2 201 1.5E-57 T 29-03-2018 AL539_RS23030 ca0a2f735ff4e0d395e15a409a127a25 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 4.7E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS23030 ca0a2f735ff4e0d395e15a409a127a25 678 Gene3D G3DSA:2.40.170.20 175 678 1.1E-77 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS23030 ca0a2f735ff4e0d395e15a409a127a25 678 Gene3D G3DSA:2.170.130.10 28 169 6.6E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS23030 ca0a2f735ff4e0d395e15a409a127a25 678 SUPERFAMILY SSF56935 33 678 4.43E-125 T 29-03-2018 AL539_RS23030 ca0a2f735ff4e0d395e15a409a127a25 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 678 5.4E-92 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS23030 ca0a2f735ff4e0d395e15a409a127a25 678 Pfam PF00593 TonB dependent receptor 271 676 3.7E-48 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 SUPERFAMILY SSF51206 8 128 3.93E-17 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 Gene3D G3DSA:1.20.120.330 498 602 0.0023 T 29-03-2018 AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 Gene3D G3DSA:2.60.120.10 3 141 1.9E-14 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 2.5E-39 T 29-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 1.9E-8 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 4.7E-41 T 29-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 SUPERFAMILY SSF54631 144 276 6.03E-16 T 29-03-2018 AL539_RS10980 827b1ca45870006310dc8d9d7a04b386 608 Gene3D G3DSA:3.10.580.10 145 284 1.1E-13 T 29-03-2018 AL539_RS08545 14ffefb49d64e2c82c95d28b403bb11e 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.7E-17 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS08545 14ffefb49d64e2c82c95d28b403bb11e 327 Pfam PF00005 ABC transporter 26 181 9.1E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS08545 14ffefb49d64e2c82c95d28b403bb11e 327 SMART SM00382 34 231 1.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08545 14ffefb49d64e2c82c95d28b403bb11e 327 SUPERFAMILY SSF52540 5 252 3.94E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08545 14ffefb49d64e2c82c95d28b403bb11e 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS08545 14ffefb49d64e2c82c95d28b403bb11e 327 Gene3D G3DSA:3.40.50.300 2 327 4.3E-72 T 29-03-2018 AL539_RS08545 14ffefb49d64e2c82c95d28b403bb11e 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.3E-22 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS20960 c0a2578c2eb9a023f8672606631b6923 395 TIGRFAM TIGR02993 ectoine_eutD: ectoine utilization protein EutD 4 394 3.2E-186 T 29-03-2018 IPR014335 Ectoine utilization protein EutD AL539_RS20960 c0a2578c2eb9a023f8672606631b6923 395 SUPERFAMILY SSF55920 161 393 4.06E-52 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS20960 c0a2578c2eb9a023f8672606631b6923 395 Gene3D G3DSA:3.40.350.10 1 144 3.3E-29 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_RS20960 c0a2578c2eb9a023f8672606631b6923 395 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 161 5.7E-21 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL539_RS20960 c0a2578c2eb9a023f8672606631b6923 395 Pfam PF00557 Metallopeptidase family M24 169 377 1.8E-30 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS20960 c0a2578c2eb9a023f8672606631b6923 395 SUPERFAMILY SSF53092 2 159 9.42E-40 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL539_RS20960 c0a2578c2eb9a023f8672606631b6923 395 Gene3D G3DSA:3.90.230.10 145 392 1.0E-38 T 29-03-2018 AL539_RS23970 8e064119820aaed451bfc919ff98fc64 393 Pfam PF07690 Major Facilitator Superfamily 15 345 1.2E-12 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS23970 8e064119820aaed451bfc919ff98fc64 393 Gene3D G3DSA:1.20.1250.20 8 195 3.7E-10 T 29-03-2018 AL539_RS23970 8e064119820aaed451bfc919ff98fc64 393 SUPERFAMILY SSF103473 14 378 1.7E-35 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS23970 8e064119820aaed451bfc919ff98fc64 393 Gene3D G3DSA:1.20.1250.20 196 388 9.4E-16 T 29-03-2018 AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 SMART SM00382 352 545 2.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 Pfam PF00005 ABC transporter 343 490 4.4E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 20 552 9.8E-184 T 29-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 Gene3D G3DSA:3.40.50.300 326 571 9.3E-58 T 29-03-2018 AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 Gene3D G3DSA:1.20.1560.10 2 306 1.1E-16 T 29-03-2018 AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 SUPERFAMILY SSF90123 18 307 1.44E-35 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 SUPERFAMILY SSF52540 315 550 3.76E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24165 d3da721d3b22abdefbcc1d108daed9e1 572 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 Pfam PF00266 Aminotransferase class-V 24 392 5.1E-148 T 29-03-2018 IPR000192 Aminotransferase class V domain AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 Gene3D G3DSA:3.90.1150.10 282 399 2.3E-41 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 3.0E-156 T 29-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 SUPERFAMILY SSF53383 2 400 1.88E-123 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 PIRSF PIRSF005572 21 403 7.8E-52 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 Gene3D G3DSA:3.40.640.10 33 281 2.7E-59 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL539_RS08040 c45cb6a4a096a60b8d19bfe3faa402d2 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 4.3E-166 T 29-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 390 5.4E-31 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 Gene3D G3DSA:2.102.10.10 47 158 2.5E-22 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 SUPERFAMILY SSF55961 169 391 2.28E-46 T 29-03-2018 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 Pfam PF00355 Rieske [2Fe-2S] domain 49 134 5.0E-17 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 Gene3D G3DSA:3.90.380.10 159 394 1.9E-52 T 29-03-2018 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 2.5E-17 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 2.5E-17 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 2.5E-17 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 2.5E-17 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 2.5E-17 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AL539_RS24235 a7eafa35f7f6918414b7b86387918b48 395 SUPERFAMILY SSF50022 15 167 4.98E-42 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 Gene3D G3DSA:2.60.120.10 2 97 3.9E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 Gene3D G3DSA:1.10.10.60 157 216 1.4E-6 T 29-03-2018 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 Pfam PF12833 Helix-turn-helix domain 183 259 4.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 SMART SM00342 177 259 8.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 Pfam PF02311 AraC-like ligand binding domain 28 99 1.6E-5 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 SUPERFAMILY SSF51182 35 182 1.29E-8 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 SUPERFAMILY SSF46689 221 260 3.27E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 5.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 5.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS25605 21144ef41c8189a08542705ca1aafe4f 264 Gene3D G3DSA:1.10.10.60 217 264 7.3E-9 T 29-03-2018 AL539_RS17615 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL539_RS17615 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 29-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AL539_RS17615 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS17615 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS17615 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL539_RS17615 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 5.0E-36 T 29-03-2018 AL539_RS08815 a46e981bb83831f336085aad9926df60 522 SUPERFAMILY SSF55931 6 513 2.88E-200 T 29-03-2018 AL539_RS08815 a46e981bb83831f336085aad9926df60 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 219.285 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL539_RS08815 a46e981bb83831f336085aad9926df60 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 5.3E-206 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL539_RS08815 a46e981bb83831f336085aad9926df60 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 8.1E-167 T 29-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.0E-38 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 PIRSF PIRSF000349 1 194 4.5E-84 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 SUPERFAMILY SSF54719 84 193 2.75E-43 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.7E-34 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 SUPERFAMILY SSF46609 1 84 5.24E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS06780 5e080358437d671c9cfa30ee419eac1e 194 Gene3D G3DSA:1.10.287.990 20 82 1.4E-25 T 29-03-2018 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 Pfam PF01171 PP-loop family 21 199 1.1E-54 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 SUPERFAMILY SSF52402 19 233 2.43E-59 T 29-03-2018 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 Pfam PF09179 TilS substrate binding domain 248 315 6.5E-19 T 29-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 Pfam PF11734 TilS substrate C-terminal domain 365 435 2.0E-24 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 SMART SM00977 365 434 1.7E-23 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 SUPERFAMILY SSF82829 235 318 1.7E-24 T 29-03-2018 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 1.4E-51 T 29-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 Gene3D G3DSA:3.40.50.620 16 227 6.4E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 3.1E-16 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 SUPERFAMILY SSF56037 322 435 5.49E-28 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL539_RS07680 af0f061b90208b8da10e30d0f4dfb891 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 22.319 T 29-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 SUPERFAMILY SSF51011 480 559 1.52E-16 T 29-03-2018 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 7.3E-267 T 29-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 Gene3D G3DSA:3.20.20.470 1 108 2.3E-38 T 29-03-2018 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 Gene3D G3DSA:3.20.20.470 173 345 1.3E-37 T 29-03-2018 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 Gene3D G3DSA:3.90.400.10 109 172 4.6E-29 T 29-03-2018 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 SUPERFAMILY SSF51445 9 477 6.61E-163 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 555 6.8E-9 T 29-03-2018 IPR032091 Maltogenic Amylase, C-terminal AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 SMART SM00642 18 419 1.2E-162 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 5.2E-128 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 Gene3D G3DSA:3.20.20.80 346 473 7.7E-23 T 29-03-2018 AL539_RS16035 b26bdd3740658153bb232a4256080e2b 561 Gene3D G3DSA:2.60.40.1180 481 560 2.4E-19 T 29-03-2018 AL539_RS17650 18b2db3905573547bb7149664af7a633 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 7.3E-154 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS17650 18b2db3905573547bb7149664af7a633 405 Pfam PF00483 Nucleotidyl transferase 6 273 1.4E-63 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL539_RS17650 18b2db3905573547bb7149664af7a633 405 Gene3D G3DSA:2.160.10.10 309 404 3.9E-8 T 29-03-2018 AL539_RS17650 18b2db3905573547bb7149664af7a633 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS17650 18b2db3905573547bb7149664af7a633 405 SUPERFAMILY SSF51161 292 403 3.68E-15 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS17650 18b2db3905573547bb7149664af7a633 405 Gene3D G3DSA:3.90.550.10 4 308 3.6E-61 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS17650 18b2db3905573547bb7149664af7a633 405 SUPERFAMILY SSF53448 4 275 1.97E-70 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS17650 18b2db3905573547bb7149664af7a633 405 SUPERFAMILY SSF53448 341 358 1.97E-70 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS17650 18b2db3905573547bb7149664af7a633 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS17650 18b2db3905573547bb7149664af7a633 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS17650 18b2db3905573547bb7149664af7a633 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.521 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS23290 1eccb06d42de4b6983bbaa41c07d63d6 224 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 3 219 4.6E-64 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AL539_RS23290 1eccb06d42de4b6983bbaa41c07d63d6 224 Pfam PF00912 Transglycosylase 50 216 9.5E-52 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AL539_RS23290 1eccb06d42de4b6983bbaa41c07d63d6 224 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 1 222 37.889 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AL539_RS23290 1eccb06d42de4b6983bbaa41c07d63d6 224 Gene3D G3DSA:1.10.3810.10 43 223 5.3E-57 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AL539_RS23290 1eccb06d42de4b6983bbaa41c07d63d6 224 SUPERFAMILY SSF53955 51 221 8.72E-58 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS23120 6f75f7a187979a1103150e7e0400e0cc 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 6.8E-127 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL539_RS23120 6f75f7a187979a1103150e7e0400e0cc 426 PIRSF PIRSF006066 1 426 4.8E-148 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL539_RS23120 6f75f7a187979a1103150e7e0400e0cc 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 1.7E-113 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_RS08130 debffe266e59c04a96d37e4c25a7d9c6 230 SUPERFAMILY SSF82649 56 101 4.97E-8 T 29-03-2018 AL539_RS08130 debffe266e59c04a96d37e4c25a7d9c6 230 Pfam PF01592 NifU-like N terminal domain 55 102 5.8E-5 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL539_RS08130 debffe266e59c04a96d37e4c25a7d9c6 230 Gene3D G3DSA:3.90.1010.10 48 226 2.3E-17 T 29-03-2018 AL539_RS06730 cb2410ddd47b474725bfb5cb318be901 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL539_RS06730 cb2410ddd47b474725bfb5cb318be901 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 6.9E-69 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL539_RS06730 cb2410ddd47b474725bfb5cb318be901 138 Gene3D G3DSA:3.10.180.10 2 137 2.5E-38 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS06730 cb2410ddd47b474725bfb5cb318be901 138 SUPERFAMILY SSF54593 3 130 9.4E-37 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS06730 cb2410ddd47b474725bfb5cb318be901 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL539_RS06730 cb2410ddd47b474725bfb5cb318be901 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 2.0E-24 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS14745 a2bce86e02506082ac8dfbe77a4b085b 159 PIRSF PIRSF028680 3 159 7.8E-75 T 29-03-2018 IPR016895 Uncharacterised conserved protein UCP028680 AL539_RS14745 a2bce86e02506082ac8dfbe77a4b085b 159 SUPERFAMILY SSF56935 42 152 3.62E-6 T 29-03-2018 AL539_RS14745 a2bce86e02506082ac8dfbe77a4b085b 159 Gene3D G3DSA:2.40.160.40 36 158 4.2E-9 T 29-03-2018 AL539_RS24840 0aa2d989c74e1deb4b48feffb17faaa8 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 174 7.8E-38 T 29-03-2018 IPR005247 YbhB/YbcL AL539_RS24840 0aa2d989c74e1deb4b48feffb17faaa8 177 Gene3D G3DSA:3.90.280.10 11 177 1.5E-45 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL539_RS24840 0aa2d989c74e1deb4b48feffb17faaa8 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 5.7E-35 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL539_RS24840 0aa2d989c74e1deb4b48feffb17faaa8 177 SUPERFAMILY SSF49777 22 177 5.76E-48 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein AL539_RS01265 f5f95118dd35d427fc79e20d8b3bb024 379 SUPERFAMILY SSF111369 51 297 1.7E-81 T 29-03-2018 AL539_RS01265 f5f95118dd35d427fc79e20d8b3bb024 379 Gene3D G3DSA:1.10.287.470 116 167 2.5E-11 T 29-03-2018 AL539_RS01265 f5f95118dd35d427fc79e20d8b3bb024 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 373 9.5E-84 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS01265 f5f95118dd35d427fc79e20d8b3bb024 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 291 1.5E-15 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS01265 f5f95118dd35d427fc79e20d8b3bb024 379 Gene3D G3DSA:2.40.50.100 63 115 4.6E-14 T 29-03-2018 AL539_RS01265 f5f95118dd35d427fc79e20d8b3bb024 379 Gene3D G3DSA:2.40.50.100 168 207 7.6E-7 T 29-03-2018 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 SUPERFAMILY SSF50249 12 149 4.16E-33 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS14855 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 3.8E-81 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 Gene3D G3DSA:2.40.50.140 13 148 2.7E-27 T 29-03-2018 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 SUPERFAMILY SSF55681 156 502 9.03E-119 T 29-03-2018 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 Gene3D G3DSA:3.30.930.10 150 501 7.8E-100 T 29-03-2018 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.244 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 7.6E-8 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL539_RS14855 fd1c77af9e18813871070894f9889105 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 8.7E-201 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 Gene3D G3DSA:3.90.55.10 37 123 7.1E-11 T 29-03-2018 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 Gene3D G3DSA:3.90.55.10 517 606 1.4E-19 T 29-03-2018 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 1.7E-26 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 31 2.5E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 5.1E-104 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 Gene3D G3DSA:3.40.228.10 182 421 2.8E-59 T 29-03-2018 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 SUPERFAMILY SSF50692 670 813 2.26E-42 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 Gene3D G3DSA:2.40.40.20 651 809 4.8E-34 T 29-03-2018 AL539_RS22175 94acdb5af73e9af8244c10f3e0856ace 815 SUPERFAMILY SSF53706 47 667 6.81E-165 T 29-03-2018 AL539_RS00235 8161e3759147110dbd5eee05f2447c59 135 Pfam PF08447 PAS fold 30 115 2.1E-12 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AL539_RS00235 8161e3759147110dbd5eee05f2447c59 135 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 126 3.6E-14 T 29-03-2018 IPR000014 PAS domain AL539_RS00235 8161e3759147110dbd5eee05f2447c59 135 Gene3D G3DSA:3.40.50.10600 7 132 8.4E-27 T 29-03-2018 AL539_RS00235 8161e3759147110dbd5eee05f2447c59 135 SUPERFAMILY SSF55785 18 119 4.36E-22 T 29-03-2018 IPR000014 PAS domain AL539_RS17590 7d0ec4a43710f7370023bc2792522663 233 Gene3D G3DSA:3.30.2350.10 53 233 2.4E-37 T 29-03-2018 AL539_RS17590 7d0ec4a43710f7370023bc2792522663 233 Pfam PF00849 RNA pseudouridylate synthase 58 202 3.7E-16 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS17590 7d0ec4a43710f7370023bc2792522663 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 62 232 1.4E-58 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS17590 7d0ec4a43710f7370023bc2792522663 233 SUPERFAMILY SSF55120 47 232 2.56E-46 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS17590 7d0ec4a43710f7370023bc2792522663 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 93 107 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS12185 bcff0562ead1fbabf1f57f5f9bef993c 293 Gene3D G3DSA:3.90.1530.10 27 130 1.8E-36 T 29-03-2018 AL539_RS12185 bcff0562ead1fbabf1f57f5f9bef993c 293 Gene3D G3DSA:1.10.10.730 131 178 4.0E-17 T 29-03-2018 AL539_RS12185 bcff0562ead1fbabf1f57f5f9bef993c 293 SMART SM00470 40 130 5.6E-35 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS12185 bcff0562ead1fbabf1f57f5f9bef993c 293 SUPERFAMILY SSF110849 41 132 1.6E-27 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS12185 bcff0562ead1fbabf1f57f5f9bef993c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 214 2.5E-56 T 29-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL539_RS12185 bcff0562ead1fbabf1f57f5f9bef993c 293 Pfam PF02195 ParB-like nuclease domain 43 130 1.9E-28 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AL539_RS12185 bcff0562ead1fbabf1f57f5f9bef993c 293 SUPERFAMILY SSF109709 122 229 1.75E-32 T 29-03-2018 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 Pfam PF00989 PAS fold 221 308 6.9E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 Gene3D G3DSA:1.10.10.60 596 636 2.4E-14 T 29-03-2018 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 SUPERFAMILY SSF46689 584 634 1.43E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 418 433 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 SUPERFAMILY SSF55785 220 307 1.41E-7 T 29-03-2018 IPR000014 PAS domain AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 SUPERFAMILY SSF52540 342 574 4.89E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 362 375 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 Pfam PF00158 Sigma-54 interaction domain 342 497 9.6E-33 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 Gene3D G3DSA:3.40.50.300 338 504 4.0E-17 T 29-03-2018 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 Pfam PF02954 Bacterial regulatory protein, Fis family 591 632 1.1E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 Gene3D G3DSA:3.30.450.20 201 334 3.7E-8 T 29-03-2018 AL539_RS14150 ec8676115065b410b60f3d0c32be1456 641 Gene3D G3DSA:1.10.8.60 505 595 1.2E-13 T 29-03-2018 AL539_RS09245 27c3a2ba0bffef522c89b9f1f724b51d 141 SMART SM00732 3 104 3.3E-34 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL539_RS09245 27c3a2ba0bffef522c89b9f1f724b51d 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.2E-48 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL539_RS09245 27c3a2ba0bffef522c89b9f1f724b51d 141 Pfam PF03652 Holliday junction resolvase 4 136 1.1E-35 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL539_RS09245 27c3a2ba0bffef522c89b9f1f724b51d 141 SUPERFAMILY SSF53098 3 136 8.95E-37 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS09245 27c3a2ba0bffef522c89b9f1f724b51d 141 Gene3D G3DSA:3.30.420.140 1 139 4.2E-37 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL539_RS09245 27c3a2ba0bffef522c89b9f1f724b51d 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.126 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL539_RS14190 f8e29cf4af61a9cb881e685dbc3df60a 455 Pfam PF13356 Arm DNA-binding domain 2 95 9.9E-10 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AL539_RS14190 f8e29cf4af61a9cb881e685dbc3df60a 455 Gene3D G3DSA:1.10.443.10 234 408 6.5E-24 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS14190 f8e29cf4af61a9cb881e685dbc3df60a 455 Gene3D G3DSA:1.10.150.130 108 233 1.0E-10 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS14190 f8e29cf4af61a9cb881e685dbc3df60a 455 SUPERFAMILY SSF56349 113 406 1.58E-45 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS14190 f8e29cf4af61a9cb881e685dbc3df60a 455 Pfam PF00589 Phage integrase family 231 382 3.6E-14 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS18535 29959b474858cb8baced43d27b94029a 251 SUPERFAMILY SSF88713 7 249 2.52E-91 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL539_RS18535 29959b474858cb8baced43d27b94029a 251 Pfam PF03746 LamB/YcsF family 9 246 3.6E-94 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL539_RS18535 29959b474858cb8baced43d27b94029a 251 Gene3D G3DSA:3.20.20.370 7 251 4.5E-97 T 29-03-2018 AL539_RS18535 29959b474858cb8baced43d27b94029a 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 43.123 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 PIRSF PIRSF005419 2 708 2.1E-264 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 Pfam PF00771 FHIPEP family 29 698 6.4E-237 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 17 706 3.8E-298 T 29-03-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 135 151 5.0E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 154 172 5.0E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 235 249 5.0E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 73 92 5.0E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 36 49 5.0E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 184 201 5.0E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS04380 2115cf7fc5573a6aebd5456bf0a7fc96 708 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 140 163 - T 29-03-2018 IPR025505 FHIPEP conserved site AL539_RS25700 ec4372ddca0d9eb7d0df764b092ba1b7 279 Gene3D G3DSA:1.10.12.10 233 274 9.4E-10 T 29-03-2018 IPR014748 Crontonase, C-terminal AL539_RS25700 ec4372ddca0d9eb7d0df764b092ba1b7 279 SUPERFAMILY SSF52096 15 272 1.37E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS25700 ec4372ddca0d9eb7d0df764b092ba1b7 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 25 273 1.7E-47 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL539_RS25700 ec4372ddca0d9eb7d0df764b092ba1b7 279 Gene3D G3DSA:3.90.226.10 8 232 1.9E-55 T 29-03-2018 AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 Gene3D G3DSA:3.40.50.10860 1 114 1.2E-35 T 29-03-2018 AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 Gene3D G3DSA:3.40.50.720 115 276 1.0E-28 T 29-03-2018 AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 3.5E-23 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 SUPERFAMILY SSF51735 106 273 7.04E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 31.959 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 SUPERFAMILY SSF53223 6 105 9.21E-32 T 29-03-2018 AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 3.7E-85 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL539_RS11965 d2aec9ba8db6682c7e12f1787d038ecc 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 3.2E-14 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL539_RS05970 135d89531db55a250cd75512f8305e83 202 SUPERFAMILY SSF52317 2 192 1.69E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.2E-13 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.2E-13 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.2E-13 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.3E-5 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.3E-5 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 4.6E-54 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.5E-34 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.5E-34 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.5E-34 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.5E-34 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.5E-34 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.5E-34 T 29-03-2018 AL539_RS05970 135d89531db55a250cd75512f8305e83 202 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.0E-47 T 29-03-2018 IPR017926 Glutamine amidotransferase AL539_RS05970 135d89531db55a250cd75512f8305e83 202 Gene3D G3DSA:3.40.50.880 1 193 3.1E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 SMART SM00065 21 170 1.2E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 SMART SM00382 214 358 4.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 SUPERFAMILY SSF55781 7 163 1.5E-17 T 29-03-2018 IPR029016 GAF domain-like AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 Gene3D G3DSA:1.10.10.60 466 509 2.0E-12 T 29-03-2018 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 Pfam PF00158 Sigma-54 interaction domain 195 361 1.4E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 9.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 9.0E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 4.8E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 SUPERFAMILY SSF46689 459 507 9.41E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 SUPERFAMILY SSF52540 193 437 3.22E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 Gene3D G3DSA:3.30.450.40 6 184 3.3E-16 T 29-03-2018 IPR029016 GAF domain-like AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 Gene3D G3DSA:1.10.8.60 367 465 1.8E-17 T 29-03-2018 AL539_RS01875 e5d6d418d550d38d470a7d61abf686c8 509 Gene3D G3DSA:3.40.50.300 189 366 1.0E-26 T 29-03-2018 AL539_RS18515 948106b2d8a5200800f1a66ddb67c85d 712 Gene3D G3DSA:2.170.130.10 18 160 3.6E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS18515 948106b2d8a5200800f1a66ddb67c85d 712 SUPERFAMILY SSF56935 18 712 2.11E-114 T 29-03-2018 AL539_RS18515 948106b2d8a5200800f1a66ddb67c85d 712 Pfam PF00593 TonB dependent receptor 230 710 2.2E-59 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS18515 948106b2d8a5200800f1a66ddb67c85d 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 29 712 2.1E-180 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL539_RS18515 948106b2d8a5200800f1a66ddb67c85d 712 Gene3D G3DSA:2.40.170.20 161 712 2.5E-74 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS18515 948106b2d8a5200800f1a66ddb67c85d 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 152 8.5E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS18515 948106b2d8a5200800f1a66ddb67c85d 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 1.6E-171 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL539_RS06715 f291068494c5a24767e462f974401a05 210 SMART SM00900 100 192 4.8E-32 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL539_RS06715 f291068494c5a24767e462f974401a05 210 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.289 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL539_RS06715 f291068494c5a24767e462f974401a05 210 Pfam PF04205 FMN-binding domain 100 188 1.4E-18 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL539_RS06715 f291068494c5a24767e462f974401a05 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 1.0E-63 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL539_RS06715 f291068494c5a24767e462f974401a05 210 PIRSF PIRSF006091 1 204 7.0E-78 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 SUPERFAMILY SSF81442 43 557 8.11E-176 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 Gene3D G3DSA:1.20.210.10 43 560 6.8E-180 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 9.2E-94 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 503 2.2E-132 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 Gene3D G3DSA:1.10.287.70 574 641 3.3E-16 T 29-03-2018 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 29-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AL539_RS25760 6050ade14c404edf6f5aff39739c1044 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS19825 3c6e9e3a3b09154228d9ffbb86e27004 250 PIRSF PIRSF000090 1 249 1.3E-81 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL539_RS19825 3c6e9e3a3b09154228d9ffbb86e27004 250 Gene3D G3DSA:3.40.50.620 1 248 2.0E-82 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS19825 3c6e9e3a3b09154228d9ffbb86e27004 250 SUPERFAMILY SSF52402 2 242 3.42E-81 T 29-03-2018 AL539_RS19825 3c6e9e3a3b09154228d9ffbb86e27004 250 SMART SM00893 23 211 4.9E-67 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL539_RS19825 3c6e9e3a3b09154228d9ffbb86e27004 250 Pfam PF01012 Electron transfer flavoprotein domain 26 205 2.7E-47 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL539_RS03485 01f9dc6938fcedd4e77653c14dfb99a6 302 Gene3D G3DSA:3.30.420.40 114 302 4.5E-46 T 29-03-2018 AL539_RS03485 01f9dc6938fcedd4e77653c14dfb99a6 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL539_RS03485 01f9dc6938fcedd4e77653c14dfb99a6 302 SUPERFAMILY SSF53067 1 299 1.6E-57 T 29-03-2018 AL539_RS03485 01f9dc6938fcedd4e77653c14dfb99a6 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.697 T 29-03-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 AL539_RS03485 01f9dc6938fcedd4e77653c14dfb99a6 302 Pfam PF00480 ROK family 2 300 1.0E-74 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL539_RS03485 01f9dc6938fcedd4e77653c14dfb99a6 302 Gene3D G3DSA:3.30.420.40 1 113 9.0E-22 T 29-03-2018 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.2E-210 T 29-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 Pfam PF00890 FAD binding domain 10 392 7.1E-101 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.5E-14 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 PIRSF PIRSF000171 336 534 8.3E-13 T 29-03-2018 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 PIRSF PIRSF000171 1 266 2.1E-28 T 29-03-2018 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 SUPERFAMILY SSF51905 5 255 2.54E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 SUPERFAMILY SSF51905 356 447 2.54E-75 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 SUPERFAMILY SSF46977 425 525 1.96E-32 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 Gene3D G3DSA:1.20.58.100 439 536 2.2E-28 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 Gene3D G3DSA:3.50.50.60 1 438 4.5E-71 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 SUPERFAMILY SSF56425 238 353 1.12E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 4.0E-8 T 29-03-2018 AL539_RS09075 2775566627ae7270b2b109b37be5d584 537 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 4.0E-8 T 29-03-2018 AL539_RS08950 b30e259b31336e7d83c940341b3dd99a 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.918 T 29-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL539_RS08950 b30e259b31336e7d83c940341b3dd99a 258 Gene3D G3DSA:3.40.1210.10 11 257 3.9E-88 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL539_RS08950 b30e259b31336e7d83c940341b3dd99a 258 Pfam PF01975 Survival protein SurE 13 191 2.7E-61 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL539_RS08950 b30e259b31336e7d83c940341b3dd99a 258 SUPERFAMILY SSF64167 11 256 2.75E-85 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL539_RS08950 b30e259b31336e7d83c940341b3dd99a 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 5.6E-74 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 Gene3D G3DSA:3.30.70.270 521 699 4.2E-39 T 29-03-2018 AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 693 8.4E-35 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 SUPERFAMILY SSF55073 537 699 1.49E-37 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 Gene3D G3DSA:3.30.450.40 340 520 4.3E-14 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 Gene3D G3DSA:3.30.450.40 168 339 8.8E-9 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 SUPERFAMILY SSF55781 195 343 4.14E-6 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 696 8.1E-37 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 SMART SM00267 521 698 1.1E-42 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24105 2aefca929a66a6752413b89dbbb134cf 707 SUPERFAMILY SSF55781 341 513 1.77E-5 T 29-03-2018 IPR029016 GAF domain-like AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 PIRSF PIRSF000101 1 566 6.5E-301 T 29-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 Gene3D G3DSA:3.30.43.10 1 98 4.4E-11 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 SUPERFAMILY SSF56176 4 268 1.96E-67 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 SUPERFAMILY SSF55103 271 561 1.22E-105 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 Gene3D G3DSA:3.30.1370.20 431 514 7.1E-39 T 29-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 1.6E-135 T 29-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 Gene3D G3DSA:3.30.465.10 101 263 7.6E-73 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 Gene3D G3DSA:3.30.70.610 264 343 5.9E-18 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 Gene3D G3DSA:3.30.70.610 344 430 2.0E-26 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AL539_RS18030 cac1db729c1af77f73b8842c3320e8d1 568 Pfam PF01565 FAD binding domain 41 160 2.1E-9 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 SUPERFAMILY SSF49503 121 260 2.5E-53 T 29-03-2018 IPR008972 Cupredoxin AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 29-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 8.3E-36 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 SUPERFAMILY SSF81464 15 117 7.68E-28 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 282 356 4.4E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 5.1E-40 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 5.1E-40 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 5.1E-40 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 5.1E-40 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 5.1E-40 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 5.1E-40 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 5.1E-40 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 Gene3D G3DSA:1.10.760.10 251 364 7.1E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 SUPERFAMILY SSF46626 225 367 1.3E-25 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 Gene3D G3DSA:2.60.40.420 120 250 3.4E-48 T 29-03-2018 IPR008972 Cupredoxin AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 6.7E-61 T 29-03-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 Gene3D G3DSA:1.10.287.90 25 119 6.4E-27 T 29-03-2018 AL539_RS25045 0f6bec923cb7392f5429fdbec0a3d18c 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 30 108 1.3E-14 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS22905 3ba793a8b31d26d5e97720da12ccb3c4 208 Pfam PF00188 Cysteine-rich secretory protein family 77 204 6.2E-18 T 29-03-2018 IPR014044 CAP domain AL539_RS22905 3ba793a8b31d26d5e97720da12ccb3c4 208 Gene3D G3DSA:3.40.33.10 64 207 2.5E-17 T 29-03-2018 IPR014044 CAP domain AL539_RS22905 3ba793a8b31d26d5e97720da12ccb3c4 208 SUPERFAMILY SSF55797 71 205 2.09E-19 T 29-03-2018 IPR014044 CAP domain AL539_RS06570 4748b7f365dc0d287ac80d4b21bfdf66 264 Gene3D G3DSA:3.40.50.300 1 240 4.0E-50 T 29-03-2018 AL539_RS06570 4748b7f365dc0d287ac80d4b21bfdf66 264 Pfam PF00005 ABC transporter 22 177 5.3E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS06570 4748b7f365dc0d287ac80d4b21bfdf66 264 SUPERFAMILY SSF52540 2 231 5.73E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06570 4748b7f365dc0d287ac80d4b21bfdf66 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS06570 4748b7f365dc0d287ac80d4b21bfdf66 264 SMART SM00382 31 226 8.6E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17980 edd6340493d77bc4a3273bf3e8a32a42 331 SUPERFAMILY SSF53187 38 330 1.72E-50 T 29-03-2018 AL539_RS17980 edd6340493d77bc4a3273bf3e8a32a42 331 Gene3D G3DSA:3.40.630.10 48 315 6.2E-30 T 29-03-2018 AL539_RS17980 edd6340493d77bc4a3273bf3e8a32a42 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 1.4E-71 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS17980 edd6340493d77bc4a3273bf3e8a32a42 331 PIRSF PIRSF039012 9 331 1.1E-94 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS09300 839b243771cce65eda89ee6a9bea3718 342 Pfam PF01170 Putative RNA methylase family UPF0020 133 295 1.7E-13 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS09300 839b243771cce65eda89ee6a9bea3718 342 SUPERFAMILY SSF53335 107 316 1.45E-21 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS09300 839b243771cce65eda89ee6a9bea3718 342 Gene3D G3DSA:3.40.50.150 97 342 2.1E-18 T 29-03-2018 AL539_RS10530 402f96e386ac24d0c19eb2beb4bc81cb 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 8.8E-134 T 29-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL539_RS10530 402f96e386ac24d0c19eb2beb4bc81cb 339 Gene3D G3DSA:2.40.40.20 277 338 1.5E-15 T 29-03-2018 AL539_RS10530 402f96e386ac24d0c19eb2beb4bc81cb 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 3.7E-138 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL539_RS10530 402f96e386ac24d0c19eb2beb4bc81cb 339 Gene3D G3DSA:3.40.630.30 1 276 4.0E-19 T 29-03-2018 AL539_RS10530 402f96e386ac24d0c19eb2beb4bc81cb 339 SUPERFAMILY SSF55729 1 338 1.7E-129 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS10530 402f96e386ac24d0c19eb2beb4bc81cb 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 7.3E-133 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL539_RS00990 40ad2ab478e9bef8717b198d1e18af3d 592 Pfam PF08273 Zinc-binding domain of primase-helicase 42 76 3.2E-7 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AL539_RS00990 40ad2ab478e9bef8717b198d1e18af3d 592 SMART SM00778 40 77 1.6E-4 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AL539_RS00990 40ad2ab478e9bef8717b198d1e18af3d 592 Gene3D G3DSA:3.40.1360.10 461 577 7.5E-7 T 29-03-2018 AL539_RS00990 40ad2ab478e9bef8717b198d1e18af3d 592 Gene3D G3DSA:3.90.580.10 20 105 2.4E-7 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL539_RS00990 40ad2ab478e9bef8717b198d1e18af3d 592 SUPERFAMILY SSF57783 29 98 8.84E-5 T 29-03-2018 AL539_RS00990 40ad2ab478e9bef8717b198d1e18af3d 592 Pfam PF13362 Toprim domain 470 569 7.5E-14 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS23580 14b585cb9b6b89120da9b838f017e2c6 313 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL539_RS23580 14b585cb9b6b89120da9b838f017e2c6 313 Pfam PF04055 Radical SAM superfamily 20 251 2.7E-22 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS23580 14b585cb9b6b89120da9b838f017e2c6 313 Gene3D G3DSA:3.80.30.10 134 313 4.3E-33 T 29-03-2018 AL539_RS23580 14b585cb9b6b89120da9b838f017e2c6 313 PIRSF PIRSF000371 1 313 7.8E-112 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL539_RS23580 14b585cb9b6b89120da9b838f017e2c6 313 SUPERFAMILY SSF102114 139 279 8.24E-16 T 29-03-2018 AL539_RS23580 14b585cb9b6b89120da9b838f017e2c6 313 Pfam PF13353 4Fe-4S single cluster domain 12 167 8.4E-12 T 29-03-2018 AL539_RS23580 14b585cb9b6b89120da9b838f017e2c6 313 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 302 9.7E-94 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL539_RS14110 eb1031502d26fecc9121ebee2218304a 391 Gene3D G3DSA:3.90.220.20 1 162 1.1E-31 T 29-03-2018 AL539_RS14110 eb1031502d26fecc9121ebee2218304a 391 Gene3D G3DSA:3.90.220.20 163 375 2.9E-26 T 29-03-2018 AL539_RS14110 eb1031502d26fecc9121ebee2218304a 391 Pfam PF01420 Type I restriction modification DNA specificity domain 3 156 9.8E-22 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS14110 eb1031502d26fecc9121ebee2218304a 391 Pfam PF01420 Type I restriction modification DNA specificity domain 187 361 8.3E-6 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS14110 eb1031502d26fecc9121ebee2218304a 391 SUPERFAMILY SSF116734 2 180 2.13E-36 T 29-03-2018 AL539_RS14110 eb1031502d26fecc9121ebee2218304a 391 SUPERFAMILY SSF116734 187 390 1.19E-31 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 SUPERFAMILY SSF82693 41 133 2.88E-23 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 Pfam PF00873 AcrB/AcrD/AcrF family 6 1026 1.1E-175 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 Gene3D G3DSA:3.30.70.1430 566 656 9.3E-10 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 Gene3D G3DSA:3.30.2090.10 180 267 5.9E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 Gene3D G3DSA:3.30.2090.10 710 795 1.4E-8 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 Gene3D G3DSA:3.30.70.1430 41 143 1.6E-24 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 SUPERFAMILY SSF82866 289 490 6.02E-42 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 SUPERFAMILY SSF82714 184 263 2.09E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 SUPERFAMILY SSF82714 711 793 7.06E-5 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 Gene3D G3DSA:1.20.1640.10 796 1029 4.8E-44 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.9E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.9E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.9E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.9E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.9E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.9E-28 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 SUPERFAMILY SSF82693 267 325 9.94E-13 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 SUPERFAMILY SSF82693 142 181 9.94E-13 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 SUPERFAMILY SSF82866 793 1027 3.92E-48 T 29-03-2018 AL539_RS08495 e90fd2e7507ce9c8fcab968b2528f411 1034 Gene3D G3DSA:1.20.1640.10 280 503 8.9E-44 T 29-03-2018 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 SUPERFAMILY SSF47203 234 387 4.99E-48 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 Gene3D G3DSA:1.10.540.10 1 127 8.1E-39 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 Gene3D G3DSA:1.20.140.10 225 389 2.8E-57 T 29-03-2018 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 7.3E-25 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 Gene3D G3DSA:2.40.110.10 128 224 1.4E-39 T 29-03-2018 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 PIRSF PIRSF016578 8 105 0.0029 T 29-03-2018 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 PIRSF PIRSF016578 141 389 7.2E-9 T 29-03-2018 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 SUPERFAMILY SSF56645 6 249 6.41E-84 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.9E-43 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS19650 a80cdca717f4dcc4953506583a55ea75 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 8.5E-36 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS01610 d97af8c6a0c4c0f5d554eb6fe7473d95 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 29-03-2018 AL539_RS01610 d97af8c6a0c4c0f5d554eb6fe7473d95 135 Pfam PF00816 H-NS histone family 33 129 7.0E-20 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL539_RS01610 d97af8c6a0c4c0f5d554eb6fe7473d95 135 Gene3D G3DSA:4.10.430.10 94 135 3.7E-19 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL539_RS01610 d97af8c6a0c4c0f5d554eb6fe7473d95 135 Gene3D G3DSA:1.10.287.1050 1 57 6.7E-26 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AL539_RS01610 d97af8c6a0c4c0f5d554eb6fe7473d95 135 PIRSF PIRSF002096 1 135 2.2E-55 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL539_RS01610 d97af8c6a0c4c0f5d554eb6fe7473d95 135 SMART SM00528 88 135 3.2E-24 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL539_RS01610 d97af8c6a0c4c0f5d554eb6fe7473d95 135 SUPERFAMILY SSF81273 2 58 6.08E-17 T 29-03-2018 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 SUPERFAMILY SSF51621 6 437 3.36E-153 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 Pfam PF00463 Isocitrate lyase family 259 437 4.3E-53 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 Pfam PF00463 Isocitrate lyase family 15 258 1.4E-62 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 Gene3D G3DSA:3.20.20.60 2 420 8.0E-151 T 29-03-2018 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 PIRSF PIRSF001362 1 437 2.0E-224 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 258 7.0E-115 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL539_RS15235 e4598b22b4f57cd0d200cb927e18b479 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 3.0E-90 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL539_RS11995 a70b82c34466b5eef6612fbf95115fe3 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.527 T 29-03-2018 IPR007456 Smg AL539_RS11995 a70b82c34466b5eef6612fbf95115fe3 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 4.6E-59 T 29-03-2018 IPR007456 Smg AL539_RS15310 7a6d55022939f364a152332e7b1f10f2 107 SUPERFAMILY SSF89360 1 96 1.23E-34 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS15310 7a6d55022939f364a152332e7b1f10f2 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.3E-26 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS15310 7a6d55022939f364a152332e7b1f10f2 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 4.4E-38 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL539_RS15310 7a6d55022939f364a152332e7b1f10f2 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.9E-58 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AL539_RS15310 7a6d55022939f364a152332e7b1f10f2 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL539_RS15310 7a6d55022939f364a152332e7b1f10f2 107 Gene3D G3DSA:2.60.300.12 2 107 3.1E-39 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS10445 eea800052c40aa364bc5732a3bdb35f6 260 Gene3D G3DSA:1.10.287.460 31 138 8.6E-30 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL539_RS10445 eea800052c40aa364bc5732a3bdb35f6 260 SUPERFAMILY SSF54534 46 253 1.65E-64 T 29-03-2018 AL539_RS10445 eea800052c40aa364bc5732a3bdb35f6 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL539_RS10445 eea800052c40aa364bc5732a3bdb35f6 260 Gene3D G3DSA:3.10.50.40 139 255 2.9E-45 T 29-03-2018 AL539_RS10445 eea800052c40aa364bc5732a3bdb35f6 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 3.2E-33 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 SMART SM00304 347 402 0.0034 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 SUPERFAMILY SSF58104 378 677 2.49E-63 T 29-03-2018 AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 644 8.7E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 Gene3D G3DSA:1.10.287.1060 378 462 5.3E-6 T 29-03-2018 AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 Gene3D G3DSA:3.30.450.20 40 321 5.1E-19 T 29-03-2018 AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 Gene3D G3DSA:1.10.287.950 463 678 5.7E-45 T 29-03-2018 AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 SUPERFAMILY SSF103190 115 212 2.83E-12 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 39 324 6.4E-66 T 29-03-2018 IPR033462 Cache 3/Cache 2 fusion domain AL539_RS06920 a8863fa6f5cb3b2084e021d8dc1cfc7d 678 SMART SM00283 417 678 8.1E-68 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 SMART SM00283 277 538 1.7E-71 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 Gene3D G3DSA:3.30.450.20 21 187 9.8E-29 T 29-03-2018 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 Pfam PF17200 Single Cache domain 2 36 185 4.3E-33 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 SMART SM01049 30 124 7.0E-19 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 502 1.5E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 9.2E-27 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 9.2E-27 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 9.2E-27 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 9.2E-27 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 Gene3D G3DSA:1.10.287.950 200 317 4.7E-5 T 29-03-2018 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 Gene3D G3DSA:1.10.287.950 318 541 5.3E-50 T 29-03-2018 AL539_RS09660 645770ae925d7c9e1648c9430549a1b1 541 SUPERFAMILY SSF58104 244 539 1.57E-69 T 29-03-2018 AL539_RS22300 2e891bfd5bb2902df637136b966276f5 214 Pfam PF03922 OmpW family 24 214 1.3E-72 T 29-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AL539_RS22300 2e891bfd5bb2902df637136b966276f5 214 Gene3D G3DSA:2.40.160.20 22 214 6.7E-41 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS22300 2e891bfd5bb2902df637136b966276f5 214 SUPERFAMILY SSF56925 23 214 2.62E-33 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.0E-155 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 SUPERFAMILY SSF51735 137 303 3.58E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 Gene3D G3DSA:3.50.50.60 178 196 1.5E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.4E-46 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 SUPERFAMILY SSF52283 305 360 3.4E-67 T 29-03-2018 AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 SUPERFAMILY SSF52283 1 137 3.4E-67 T 29-03-2018 AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.8E-83 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 PIRSF PIRSF000183 1 371 1.1E-156 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 SMART SM01003 4 137 2.6E-79 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 SMART SM01002 149 297 3.4E-87 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 Gene3D G3DSA:3.40.50.720 197 371 2.2E-46 T 29-03-2018 AL539_RS01465 8e8923096c87b50371a68da5b59870a6 374 Gene3D G3DSA:3.40.50.720 1 177 6.3E-45 T 29-03-2018 AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 42 116 9.3E-29 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 46 113 1.5E-19 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 Gene3D G3DSA:2.30.330.10 35 117 8.1E-21 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 SUPERFAMILY SSF101801 41 116 4.84E-19 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 6.1E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 6.1E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 6.1E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS23700 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 6.1E-17 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.185 T 29-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 SUPERFAMILY SSF52283 4 130 2.76E-23 T 29-03-2018 AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 6.0E-28 T 29-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 SUPERFAMILY SSF51735 93 257 3.21E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 285 1.5E-23 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 Gene3D G3DSA:3.40.50.720 1 104 1.5E-26 T 29-03-2018 AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 Gene3D G3DSA:3.40.50.720 105 258 9.5E-31 T 29-03-2018 AL539_RS07075 bfb228a40e630c7e8891603010a886a2 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 1.7E-33 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL539_RS09225 105fd546099e9f6b63dcb0eb4bec195f 231 SUPERFAMILY SSF54060 20 228 3.53E-94 T 29-03-2018 AL539_RS09225 105fd546099e9f6b63dcb0eb4bec195f 231 Pfam PF04231 Endonuclease I 35 227 7.1E-46 T 29-03-2018 IPR007346 Endonuclease I GO:0004518 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 4.3E-163 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 Pfam PF01235 Sodium:alanine symporter family 48 453 2.1E-162 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.6E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.6E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 1.6E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.6E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.6E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.6E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS14805 bcb8e0211123d89027aa52b786aa7d1a 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 29-03-2018 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.779 T 29-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 SUPERFAMILY SSF53187 179 496 3.77E-124 T 29-03-2018 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 9.7E-34 T 29-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 Gene3D G3DSA:3.40.630.10 170 501 1.1E-134 T 29-03-2018 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 Gene3D G3DSA:3.40.220.10 1 166 4.0E-31 T 29-03-2018 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 3.5E-123 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL539_RS09810 84e2bf41affad93db62c5133778bb1ec 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL539_RS01295 682dc3792cc63b23a1d9c37f3ab28813 442 Gene3D G3DSA:3.60.10.10 175 441 1.1E-32 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS01295 682dc3792cc63b23a1d9c37f3ab28813 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 402 4.8E-10 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS01295 682dc3792cc63b23a1d9c37f3ab28813 442 SUPERFAMILY SSF56219 175 440 8.24E-62 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 SUPERFAMILY SSF53850 88 292 1.09E-28 T 29-03-2018 AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 Gene3D G3DSA:3.40.190.10 178 264 1.3E-12 T 29-03-2018 AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 Gene3D G3DSA:3.40.190.10 89 177 1.1E-10 T 29-03-2018 AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 Pfam PF03466 LysR substrate binding domain 87 282 1.9E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 Gene3D G3DSA:1.10.10.10 1 88 1.7E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18255 78d60b41bf82f083f987a13051a44cd3 294 SUPERFAMILY SSF46785 1 87 6.74E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07395 c2e82e72e212849bb923b33aad4cc3d0 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 3.0E-194 T 29-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS07395 c2e82e72e212849bb923b33aad4cc3d0 439 SUPERFAMILY SSF52540 93 362 1.12E-95 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07395 c2e82e72e212849bb923b33aad4cc3d0 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS07395 c2e82e72e212849bb923b33aad4cc3d0 439 SMART SM00382 158 342 5.3E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS07395 c2e82e72e212849bb923b33aad4cc3d0 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 2.1E-73 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS07395 c2e82e72e212849bb923b33aad4cc3d0 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 1.7E-174 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS07395 c2e82e72e212849bb923b33aad4cc3d0 439 Gene3D G3DSA:3.40.50.300 92 364 4.7E-86 T 29-03-2018 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 Pfam PF00158 Sigma-54 interaction domain 133 295 1.7E-65 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 SMART SM00382 149 296 1.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 Gene3D G3DSA:1.10.10.60 363 461 5.7E-11 T 29-03-2018 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 Gene3D G3DSA:1.10.8.60 302 362 3.5E-25 T 29-03-2018 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 2.7E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 SMART SM00448 4 115 3.8E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 Pfam PF00072 Response regulator receiver domain 6 115 9.1E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 Gene3D G3DSA:3.40.50.300 130 300 5.1E-28 T 29-03-2018 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 Gene3D G3DSA:3.40.50.2300 1 129 2.8E-32 T 29-03-2018 AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 SUPERFAMILY SSF52540 134 370 1.21E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 SUPERFAMILY SSF52172 3 173 2.42E-39 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS07420 0a18c59299fd9eaa33e20a4a22a1ded9 469 SUPERFAMILY SSF46689 342 460 1.16E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS00805 4d2df2ffebd269507f57f2dc66c5d3cf 139 Gene3D G3DSA:2.40.50.140 1 128 1.1E-26 T 29-03-2018 AL539_RS00805 4d2df2ffebd269507f57f2dc66c5d3cf 139 Pfam PF00436 Single-strand binding protein family 3 107 2.7E-20 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL539_RS00805 4d2df2ffebd269507f57f2dc66c5d3cf 139 SUPERFAMILY SSF50249 1 129 2.71E-31 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS00805 4d2df2ffebd269507f57f2dc66c5d3cf 139 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 119 2.9E-25 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL539_RS00805 4d2df2ffebd269507f57f2dc66c5d3cf 139 Hamap MF_00984 Single-stranded DNA-binding protein. 2 113 22.522 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL539_RS00805 4d2df2ffebd269507f57f2dc66c5d3cf 139 PIRSF PIRSF002070 1 138 1.4E-21 T 29-03-2018 AL539_RS05810 fc99fb9459d7c238b4be2f4ae72539f8 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 36 473 2.8E-247 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL539_RS05810 fc99fb9459d7c238b4be2f4ae72539f8 475 PIRSF PIRSF000243 24 474 1.2E-124 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL539_RS05810 fc99fb9459d7c238b4be2f4ae72539f8 475 SUPERFAMILY SSF48695 37 470 1.36E-162 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS05810 fc99fb9459d7c238b4be2f4ae72539f8 475 Gene3D G3DSA:1.10.1130.10 39 341 8.7E-79 T 29-03-2018 AL539_RS05810 fc99fb9459d7c238b4be2f4ae72539f8 475 Pfam PF02335 Cytochrome c552 41 470 1.8E-178 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL539_RS05810 fc99fb9459d7c238b4be2f4ae72539f8 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.043 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL539_RS21000 378caf984e4403937b7f6de6f2c01738 289 Gene3D G3DSA:1.10.10.10 1 80 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21000 378caf984e4403937b7f6de6f2c01738 289 Pfam PF03466 LysR substrate binding domain 88 283 5.2E-29 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21000 378caf984e4403937b7f6de6f2c01738 289 Gene3D G3DSA:3.40.190.10 158 257 6.1E-12 T 29-03-2018 AL539_RS21000 378caf984e4403937b7f6de6f2c01738 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.3E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21000 378caf984e4403937b7f6de6f2c01738 289 SUPERFAMILY SSF53850 89 284 1.19E-28 T 29-03-2018 AL539_RS21000 378caf984e4403937b7f6de6f2c01738 289 SUPERFAMILY SSF46785 1 107 9.47E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21000 378caf984e4403937b7f6de6f2c01738 289 Gene3D G3DSA:3.40.190.10 81 157 1.9E-13 T 29-03-2018 AL539_RS11565 1f1c9e6d36d905c5587370cc074a1b2c 238 SUPERFAMILY SSF56784 9 238 1.2E-40 T 29-03-2018 IPR023214 HAD-like domain AL539_RS11565 1f1c9e6d36d905c5587370cc074a1b2c 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 3.5E-13 T 29-03-2018 IPR023214 HAD-like domain AL539_RS11565 1f1c9e6d36d905c5587370cc074a1b2c 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 201 3.7E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS11565 1f1c9e6d36d905c5587370cc074a1b2c 238 Gene3D G3DSA:3.40.50.1000 1 238 2.6E-23 T 29-03-2018 IPR023214 HAD-like domain AL539_RS11565 1f1c9e6d36d905c5587370cc074a1b2c 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 9.6E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS11565 1f1c9e6d36d905c5587370cc074a1b2c 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 9.6E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS11565 1f1c9e6d36d905c5587370cc074a1b2c 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 9.6E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 Pfam PF00854 POT family 85 197 2.7E-28 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 Pfam PF00854 POT family 230 405 1.3E-31 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 Gene3D G3DSA:1.20.1250.20 5 212 1.2E-23 T 29-03-2018 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 217 3.2E-59 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 225 440 2.6E-47 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 Gene3D G3DSA:1.20.1250.20 214 461 3.0E-20 T 29-03-2018 AL539_RS16675 17f867845f8f3c936da66c2f1de2a6e2 462 SUPERFAMILY SSF103473 7 434 5.36E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS10415 ed4013b6aceaa91c52e057c898c02da5 156 PIRSF PIRSF002122 3 156 1.1E-63 T 29-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AL539_RS10415 ed4013b6aceaa91c52e057c898c02da5 156 SUPERFAMILY SSF47973 6 149 1.57E-59 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AL539_RS10415 ed4013b6aceaa91c52e057c898c02da5 156 Gene3D G3DSA:1.10.455.10 6 156 5.3E-63 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AL539_RS10415 ed4013b6aceaa91c52e057c898c02da5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.6E-71 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL539_RS10415 ed4013b6aceaa91c52e057c898c02da5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 29-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS10415 ed4013b6aceaa91c52e057c898c02da5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.9E-66 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AL539_RS10415 ed4013b6aceaa91c52e057c898c02da5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.85 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL539_RS21445 5e74584e6ca8b4f000ffb1beb038a5ea 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.6E-22 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS21445 5e74584e6ca8b4f000ffb1beb038a5ea 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.6E-22 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS21445 5e74584e6ca8b4f000ffb1beb038a5ea 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.6E-22 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS21445 5e74584e6ca8b4f000ffb1beb038a5ea 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.6E-22 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS21445 5e74584e6ca8b4f000ffb1beb038a5ea 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.6E-22 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS21445 5e74584e6ca8b4f000ffb1beb038a5ea 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.037 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS21445 5e74584e6ca8b4f000ffb1beb038a5ea 223 Pfam PF02107 Flagellar L-ring protein 46 220 6.4E-60 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS12510 0eb790b121c890f8be19c90629781f7c 339 Pfam PF05036 Sporulation related domain 74 142 1.8E-6 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 Pfam PF02378 Phosphotransferase system, EIIC 189 446 2.3E-12 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 SUPERFAMILY SSF55804 1 148 1.7E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 3.4E-38 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 610 3.0E-15 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 2.9E-35 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 3.8E-28 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 Gene3D G3DSA:3.40.930.10 1 156 5.4E-40 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 SUPERFAMILY SSF52794 526 619 4.19E-29 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 176 497 5.4E-78 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL539_RS20090 87577c8a9ddf5050f4a9de50a1fbd2fd 622 Gene3D G3DSA:3.40.50.2300 525 622 4.0E-33 T 29-03-2018 AL539_RS15900 5cd535316f3bce72dae62d119b28153f 156 SUPERFAMILY SSF52121 4 154 1.57E-59 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15900 5cd535316f3bce72dae62d119b28153f 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.6E-56 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15900 5cd535316f3bce72dae62d119b28153f 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.4E-54 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15900 5cd535316f3bce72dae62d119b28153f 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.055 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15900 5cd535316f3bce72dae62d119b28153f 156 Gene3D G3DSA:3.40.50.960 1 155 8.0E-63 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS23230 f778f0312235b44e4f7763dec47d631b 62 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 45 1.1E-7 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AL539_RS23230 f778f0312235b44e4f7763dec47d631b 62 Gene3D G3DSA:2.10.260.10 1 61 7.3E-9 T 29-03-2018 AL539_RS23230 f778f0312235b44e4f7763dec47d631b 62 SUPERFAMILY SSF89447 1 48 1.92E-9 T 29-03-2018 AL539_RS23230 f778f0312235b44e4f7763dec47d631b 62 SMART SM00966 6 49 2.3E-4 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AL539_RS23230 f778f0312235b44e4f7763dec47d631b 62 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 3.5E-7 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 Pfam PF03734 L,D-transpeptidase catalytic domain 304 470 1.8E-29 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 SUPERFAMILY SSF53955 252 323 7.87E-11 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 Pfam PF01471 Putative peptidoglycan binding domain 238 276 3.6E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 Gene3D G3DSA:3.30.70.560 78 164 0.013 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 Gene3D G3DSA:2.40.440.10 297 503 8.9E-25 T 29-03-2018 AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 SUPERFAMILY SSF141523 303 357 6.15E-19 T 29-03-2018 AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 SUPERFAMILY SSF141523 413 464 6.15E-19 T 29-03-2018 AL539_RS05745 57c8552c3c3f31f6bdb9e05308075465 529 Gene3D G3DSA:1.10.101.10 165 282 9.8E-11 T 29-03-2018 IPR002477 Peptidoglycan binding-like AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 SUPERFAMILY SSF51055 334 377 3.14E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 Gene3D G3DSA:3.20.20.370 15 337 1.2E-29 T 29-03-2018 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 SMART SM00495 381 427 2.9 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 SMART SM00495 332 378 0.032 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 Pfam PF01522 Polysaccharide deacetylase 23 127 1.8E-12 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 Gene3D G3DSA:2.10.10.20 384 426 3.3E-7 T 29-03-2018 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 Gene3D G3DSA:2.10.10.20 338 377 4.1E-8 T 29-03-2018 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 SUPERFAMILY SSF88713 26 102 9.14E-26 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 SUPERFAMILY SSF88713 130 169 9.14E-26 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 SUPERFAMILY SSF88713 209 337 9.14E-26 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL539_RS09775 f241915ed2cb32e76aff5934167094f4 427 SUPERFAMILY SSF51055 383 426 2.49E-14 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS17580 87f46722652f0ec6ed2c41b117dfa982 359 Gene3D G3DSA:2.40.160.10 5 358 2.0E-33 T 29-03-2018 AL539_RS17580 87f46722652f0ec6ed2c41b117dfa982 359 Pfam PF13609 Gram-negative porin 7 334 1.3E-18 T 29-03-2018 AL539_RS17580 87f46722652f0ec6ed2c41b117dfa982 359 SUPERFAMILY SSF56935 20 359 1.57E-41 T 29-03-2018 AL539_RS24505 34d90c836cc2b7aa54ca45923793adaa 199 Gene3D G3DSA:3.80.10.10 5 195 1.3E-4 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 Gene3D G3DSA:1.10.3860.10 18 449 2.3E-88 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 SUPERFAMILY SSF118215 29 441 1.22E-91 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.8E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.8E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.8E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.8E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.8E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.8E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.8E-30 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS02375 dfdd167da1a6ee634a321a8dd7cd9a34 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.2E-98 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 SUPERFAMILY SSF52540 203 371 1.96E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 SUPERFAMILY SSF52540 70 169 1.96E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.2E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 Pfam PF12631 MnmE helical domain 122 450 1.2E-60 T 29-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 Gene3D G3DSA:1.20.120.430 281 453 4.7E-33 T 29-03-2018 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 7.1E-23 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 Gene3D G3DSA:1.20.120.430 121 280 6.1E-25 T 29-03-2018 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 4.1E-99 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 Gene3D G3DSA:3.30.1360.120 1 120 1.1E-40 T 29-03-2018 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.791 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.4E-35 T 29-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 SUPERFAMILY SSF116878 120 219 5.1E-52 T 29-03-2018 AL539_RS12215 a0cb9eb43955e91b403a461791a06045 453 SUPERFAMILY SSF116878 378 453 5.1E-52 T 29-03-2018 AL539_RS18170 8c2fd9ff3d4ca084a166fd73cb56975f 245 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 231 1.3E-87 T 29-03-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family AL539_RS18170 8c2fd9ff3d4ca084a166fd73cb56975f 245 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 7.3E-6 T 29-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 49 116 3.0E-31 T 29-03-2018 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.0E-220 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.2E-22 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 29-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 129 419 3.5E-58 T 29-03-2018 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 43 4.8E-13 T 29-03-2018 AL539_RS11680 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 1.2E-49 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF52954 530 638 1.24E-31 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.980.10 152 223 1.4E-15 T 29-03-2018 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.980.10 66 151 7.5E-24 T 29-03-2018 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.189 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.930.10 224 532 1.4E-122 T 29-03-2018 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF55681 244 527 1.97E-99 T 29-03-2018 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.1E-241 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.10.20.30 1 64 3.7E-17 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.40.50.800 533 642 3.0E-27 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Pfam PF03129 Anticodon binding domain 542 631 1.9E-21 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF55186 65 242 6.41E-65 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL539_RS02265 b043a806827dcbd7f592542a5aec3118 642 SMART SM00863 171 220 1.6E-18 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 Gene3D G3DSA:3.40.640.10 159 363 9.9E-39 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 Pfam PF00155 Aminotransferase class I and II 152 463 1.5E-22 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 Gene3D G3DSA:3.90.1150.10 364 484 4.5E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 SUPERFAMILY SSF46785 18 84 3.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 SMART SM00345 24 83 4.9E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 SUPERFAMILY SSF53383 103 482 4.54E-77 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 1.3E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS22225 5a1c1b6d895afa0dbe2664072d1834dc 485 Gene3D G3DSA:1.10.10.10 15 85 1.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04490 131f7d7bf01c9eec0a98b7601298a758 212 Pfam PF02108 Flagellar assembly protein FliH 77 194 8.4E-18 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL539_RS04490 131f7d7bf01c9eec0a98b7601298a758 212 SUPERFAMILY SSF160527 98 205 9.68E-5 T 29-03-2018 AL539_RS04490 131f7d7bf01c9eec0a98b7601298a758 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 4.5E-43 T 29-03-2018 IPR012842 Type III secretion system HrpE/YscL AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 Gene3D G3DSA:3.40.50.300 1 285 5.7E-127 T 29-03-2018 AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 SUPERFAMILY SSF52317 289 538 4.44E-88 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.4E-260 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.205 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 SUPERFAMILY SSF52540 3 269 3.64E-121 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.3E-124 T 29-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.0E-62 T 29-03-2018 IPR017926 Glutamine amidotransferase AL539_RS08980 df290d59073e681b9092e26cd92d400f 546 Gene3D G3DSA:3.40.50.880 286 542 4.1E-74 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 SUPERFAMILY SSF53850 40 270 1.81E-37 T 29-03-2018 AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 SUPERFAMILY SSF53955 299 458 1.69E-37 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 SMART SM00062 45 282 5.3E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 265 9.8E-28 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 Gene3D G3DSA:1.10.530.10 292 468 1.0E-34 T 29-03-2018 AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 Pfam PF01464 Transglycosylase SLT domain 304 416 2.6E-22 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 Gene3D G3DSA:3.40.190.10 172 291 1.5E-5 T 29-03-2018 AL539_RS15060 a49c957b4f3a9643126cc078d3a1f5a0 495 Gene3D G3DSA:3.40.190.10 40 171 1.2E-26 T 29-03-2018 AL539_RS22345 d35fcc11cba0d07056c2c90ab6b48926 268 Gene3D G3DSA:3.30.2140.10 150 263 2.2E-13 T 29-03-2018 AL539_RS22345 d35fcc11cba0d07056c2c90ab6b48926 268 Pfam PF00797 N-acetyltransferase 22 258 3.0E-69 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL539_RS22345 d35fcc11cba0d07056c2c90ab6b48926 268 SUPERFAMILY SSF54001 2 257 1.44E-72 T 29-03-2018 AL539_RS22345 d35fcc11cba0d07056c2c90ab6b48926 268 Gene3D G3DSA:3.30.2140.10 1 149 6.3E-37 T 29-03-2018 AL539_RS22345 d35fcc11cba0d07056c2c90ab6b48926 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 2.8E-9 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL539_RS22345 d35fcc11cba0d07056c2c90ab6b48926 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 2.8E-9 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL539_RS22345 d35fcc11cba0d07056c2c90ab6b48926 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 2.8E-9 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SMART SM00982 1008 1108 2.5E-47 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1110 28.955 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SMART SM00487 600 790 1.9E-33 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SUPERFAMILY SSF52540 523 783 4.65E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SUPERFAMILY SSF52540 351 466 8.23E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Gene3D G3DSA:3.40.50.300 794 956 3.2E-25 T 29-03-2018 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.1E-20 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Pfam PF03461 TRCF domain 1010 1101 5.2E-28 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 8.4E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SUPERFAMILY SSF143517 994 1147 1.96E-43 T 29-03-2018 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SUPERFAMILY SSF141259 470 548 8.11E-25 T 29-03-2018 IPR003711 CarD-like/TRCF domain AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 3.0E-26 T 29-03-2018 IPR003711 CarD-like/TRCF domain AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SUPERFAMILY SSF52540 782 990 4.15E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Gene3D G3DSA:3.40.50.300 305 793 2.3E-41 T 29-03-2018 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SMART SM01058 479 576 8.6E-53 T 29-03-2018 IPR003711 CarD-like/TRCF domain AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SMART SM00490 826 910 5.4E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 SUPERFAMILY SSF52540 11 342 7.97E-103 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17415 9d06f49b16384aa8e33eee7d79880615 1153 Gene3D G3DSA:3.30.2060.10 132 181 0.0018 T 29-03-2018 AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 2.1E-7 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 Pfam PF04055 Radical SAM superfamily 25 195 5.3E-12 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 5.9E-18 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 Gene3D G3DSA:3.20.20.70 8 361 7.5E-32 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 SUPERFAMILY SSF102114 255 372 4.97E-36 T 29-03-2018 AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 SUPERFAMILY SSF102114 24 228 4.97E-36 T 29-03-2018 AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 1.8E-145 T 29-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AL539_RS03000 b54d18599b6300583699e5f6b990aeb1 441 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 9.0E-6 T 29-03-2018 AL539_RS01755 3f742f54c4d11c5d90900215fbdf4d9a 301 Gene3D G3DSA:3.90.1640.10 1 184 2.6E-53 T 29-03-2018 AL539_RS01755 3f742f54c4d11c5d90900215fbdf4d9a 301 Pfam PF01368 DHH family 2 142 8.5E-22 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL539_RS01755 3f742f54c4d11c5d90900215fbdf4d9a 301 SUPERFAMILY SSF64182 1 298 6.41E-67 T 29-03-2018 AL539_RS01755 3f742f54c4d11c5d90900215fbdf4d9a 301 SMART SM01131 178 300 1.4E-33 T 29-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL539_RS01755 3f742f54c4d11c5d90900215fbdf4d9a 301 Pfam PF02833 DHHA2 domain 180 297 2.4E-15 T 29-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.5E-106 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.40.50.790 68 149 7.3E-35 T 29-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 29-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 SUPERFAMILY SSF56808 6 225 2.49E-82 T 29-03-2018 IPR023674 Ribosomal protein L1-like AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.7E-52 T 29-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.30.190.20 150 228 5.9E-22 T 29-03-2018 AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.048 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL539_RS11205 8c1ba8b3c18658d94a334f71b82c4fab 233 PIRSF PIRSF002155 1 227 3.8E-79 T 29-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS25920 937eaa61f2d98210d612607f72391894 157 SUPERFAMILY SSF110087 8 149 5.36E-50 T 29-03-2018 IPR007410 Copper chaperone PCuAC AL539_RS25920 937eaa61f2d98210d612607f72391894 157 Pfam PF04314 Copper chaperone PCu(A)C 33 141 1.1E-38 T 29-03-2018 IPR007410 Copper chaperone PCuAC AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.3E-62 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 33 62 7.5E-38 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 101 119 7.5E-38 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 120 149 7.5E-38 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 89 100 7.5E-38 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 PIRSF PIRSF004749 1 172 6.3E-57 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 Gene3D G3DSA:3.90.45.10 1 172 6.3E-62 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 Pfam PF01327 Polypeptide deformylase 4 152 7.3E-51 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.105 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS12010 7ec96d8e0ae7cd46590b86e49db62343 172 SUPERFAMILY SSF56420 3 165 3.53E-63 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 Gene3D G3DSA:1.10.1660.10 1 58 9.1E-22 T 29-03-2018 AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 Pfam PF00376 MerR family regulatory protein 4 40 5.4E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 4.6E-67 T 29-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 SMART SM00422 2 71 5.4E-29 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 SUPERFAMILY SSF46955 2 121 2.6E-33 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 Pfam PF09278 MerR, DNA binding 47 109 1.2E-16 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.4E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.4E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.4E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS11120 2aa07233ec3a4bf0461049b9c313ec63 132 Gene3D G3DSA:1.10.1660.10 59 132 3.0E-18 T 29-03-2018 AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SUPERFAMILY SSF109736 155 220 2.35E-21 T 29-03-2018 AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SUPERFAMILY SSF56042 825 1035 1.44E-55 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SUPERFAMILY SSF82697 1 150 3.19E-49 T 29-03-2018 AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SUPERFAMILY SSF55326 221 428 4.53E-66 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SUPERFAMILY SSF55326 619 816 3.92E-68 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 6.6E-105 T 29-03-2018 AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Gene3D G3DSA:3.90.650.10 822 996 2.2E-30 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Gene3D G3DSA:3.90.650.10 426 607 4.3E-30 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SUPERFAMILY SSF52317 1037 1295 1.81E-97 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.349 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Gene3D G3DSA:3.30.1330.10 218 425 2.1E-50 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Gene3D G3DSA:3.30.1330.10 613 813 4.2E-24 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Gene3D G3DSA:3.30.1330.10 183 217 0.0084 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SUPERFAMILY SSF56042 432 615 2.54E-54 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 1.3E-28 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 968 1.5E-14 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 Gene3D G3DSA:3.40.50.880 1040 1296 4.0E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS15815 9ac1f267245c75c69db2555df72e9b85 1297 SMART SM01211 1041 1296 3.1E-156 T 29-03-2018 AL539_RS14675 704472841a258799647b41a944e49e0f 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.8E-48 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS14675 704472841a258799647b41a944e49e0f 231 Gene3D G3DSA:3.40.50.1580 1 231 2.7E-55 T 29-03-2018 AL539_RS14675 704472841a258799647b41a944e49e0f 231 SUPERFAMILY SSF53167 1 229 8.51E-74 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS14675 704472841a258799647b41a944e49e0f 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 4.1E-102 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS14675 704472841a258799647b41a944e49e0f 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.863 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 SMART SM00091 128 194 9.0E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 Pfam PF00571 CBS domain 761 816 2.4E-6 T 29-03-2018 IPR000644 CBS domain AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 Gene3D G3DSA:3.30.450.20 122 240 2.8E-12 T 29-03-2018 AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 3.0E-9 T 29-03-2018 IPR000014 PAS domain AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 Gene3D G3DSA:3.10.580.10 679 818 2.2E-11 T 29-03-2018 AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 Gene3D G3DSA:3.30.70.270 295 414 3.7E-4 T 29-03-2018 AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 SUPERFAMILY SSF141868 425 662 5.1E-64 T 29-03-2018 IPR001633 EAL domain AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 Pfam PF00563 EAL domain 426 657 8.0E-62 T 29-03-2018 IPR001633 EAL domain AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 Pfam PF00989 PAS fold 132 235 1.3E-9 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 Gene3D G3DSA:3.20.20.450 415 667 9.4E-73 T 29-03-2018 IPR001633 EAL domain AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 SUPERFAMILY SSF55785 126 239 1.06E-14 T 29-03-2018 IPR000014 PAS domain AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 SUPERFAMILY SSF54631 693 816 3.17E-11 T 29-03-2018 AL539_RS06070 86a756834ba37c7f10c613c2c8cc16cf 818 SMART SM00052 417 663 1.2E-58 T 29-03-2018 IPR001633 EAL domain AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 Gene3D G3DSA:3.40.50.2300 175 306 9.1E-32 T 29-03-2018 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 SUPERFAMILY SSF53822 76 327 1.57E-40 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 Gene3D G3DSA:3.40.50.2300 64 174 1.9E-11 T 29-03-2018 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 2.5E-29 T 29-03-2018 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 7.2E-17 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 SUPERFAMILY SSF47413 3 53 1.59E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 SMART SM00354 1 74 1.3E-13 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS08200 10c283cafd7c5792f913e876921f7f4e 328 Gene3D G3DSA:1.10.260.40 2 63 8.9E-17 T 29-03-2018 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 PIRSF PIRSF005419 1 696 7.4E-224 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 694 4.7E-237 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 29-03-2018 IPR025505 FHIPEP conserved site AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS23675 42ca8979efbd358d2d4d574c37e50643 696 Pfam PF00771 FHIPEP family 25 687 2.3E-242 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 Gene3D G3DSA:3.30.450.20 79 192 9.3E-9 T 29-03-2018 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.0E-28 T 29-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS05560 65881c5962687c26be51d500e194a72d 514 SUPERFAMILY SSF55021 1 68 1.02E-6 T 29-03-2018 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 Gene3D G3DSA:1.10.10.60 470 513 4.4E-7 T 29-03-2018 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 SMART SM00382 225 368 5.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS05560 65881c5962687c26be51d500e194a72d 514 SUPERFAMILY SSF46689 461 512 9.56E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 Pfam PF00158 Sigma-54 interaction domain 206 370 6.6E-57 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 Gene3D G3DSA:3.30.70.260 1 78 1.3E-9 T 29-03-2018 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 SUPERFAMILY SSF55785 81 171 1.1E-9 T 29-03-2018 IPR000014 PAS domain AL539_RS05560 65881c5962687c26be51d500e194a72d 514 Pfam PF00989 PAS fold 83 130 5.3E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 SMART SM00091 80 146 3.9E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS05560 65881c5962687c26be51d500e194a72d 514 SUPERFAMILY SSF52540 205 445 1.15E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS05560 65881c5962687c26be51d500e194a72d 514 Gene3D G3DSA:1.10.8.60 377 469 2.1E-17 T 29-03-2018 AL539_RS05560 65881c5962687c26be51d500e194a72d 514 Gene3D G3DSA:3.40.50.300 201 376 7.5E-23 T 29-03-2018 AL539_RS23250 b58c1792be9472538d818cf87fbf60b3 102 SUPERFAMILY SSF55604 25 97 1.26E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS23250 b58c1792be9472538d818cf87fbf60b3 102 Gene3D G3DSA:3.30.1360.60 22 98 1.6E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS23250 b58c1792be9472538d818cf87fbf60b3 102 Pfam PF00367 phosphotransferase system, EIIB 28 59 1.5E-9 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS02800 38b7002d029905e573c4da1f0d8602eb 481 Pfam PF00171 Aldehyde dehydrogenase family 24 475 1.6E-163 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS02800 38b7002d029905e573c4da1f0d8602eb 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS02800 38b7002d029905e573c4da1f0d8602eb 481 Gene3D G3DSA:3.40.309.10 273 462 3.0E-72 T 29-03-2018 AL539_RS02800 38b7002d029905e573c4da1f0d8602eb 481 SUPERFAMILY SSF53720 24 479 1.44E-159 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS02800 38b7002d029905e573c4da1f0d8602eb 481 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 29 474 1.3E-200 T 29-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AL539_RS02800 38b7002d029905e573c4da1f0d8602eb 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS02800 38b7002d029905e573c4da1f0d8602eb 481 Gene3D G3DSA:3.40.605.10 8 272 1.2E-90 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS22935 8a4707fc1bd6c3e6f8d4b481d70be201 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 3.7E-52 T 29-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AL539_RS22935 8a4707fc1bd6c3e6f8d4b481d70be201 140 Gene3D G3DSA:3.30.300.20 44 140 2.1E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS22935 8a4707fc1bd6c3e6f8d4b481d70be201 140 Gene3D G3DSA:2.20.25.10 1 43 8.5E-18 T 29-03-2018 AL539_RS22935 8a4707fc1bd6c3e6f8d4b481d70be201 140 Pfam PF02566 OsmC-like protein 38 133 1.1E-17 T 29-03-2018 IPR003718 OsmC/Ohr family AL539_RS22935 8a4707fc1bd6c3e6f8d4b481d70be201 140 SUPERFAMILY SSF82784 1 135 3.4E-42 T 29-03-2018 IPR003718 OsmC/Ohr family AL539_RS05785 1bc55229706497aa2b4d68649c5708c8 177 SUPERFAMILY SSF52833 44 172 1.94E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS05785 1bc55229706497aa2b4d68649c5708c8 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 13 169 3.0E-41 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL539_RS05785 1bc55229706497aa2b4d68649c5708c8 177 Gene3D G3DSA:3.40.30.10 29 177 2.0E-25 T 29-03-2018 AL539_RS05785 1bc55229706497aa2b4d68649c5708c8 177 Pfam PF08534 Redoxin 65 158 2.4E-12 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL539_RS02320 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.5E-106 T 29-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AL539_RS02320 d15f2739bb2236d42ac972bc7da1c78a 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.8E-111 T 29-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL539_RS02320 d15f2739bb2236d42ac972bc7da1c78a 327 Gene3D G3DSA:3.30.930.10 7 327 1.2E-93 T 29-03-2018 AL539_RS02320 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.1E-25 T 29-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL539_RS02320 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF55681 92 327 1.73E-82 T 29-03-2018 AL539_RS02320 d15f2739bb2236d42ac972bc7da1c78a 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.925 T 29-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AL539_RS02320 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF46589 14 99 1.62E-22 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AL539_RS02090 5291d94441fa979e09a613d6ac2f3f2e 165 Pfam PF00072 Response regulator receiver domain 6 125 9.9E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS02090 5291d94441fa979e09a613d6ac2f3f2e 165 Gene3D G3DSA:3.40.50.2300 1 161 3.5E-17 T 29-03-2018 AL539_RS02090 5291d94441fa979e09a613d6ac2f3f2e 165 SMART SM00448 4 125 2.5E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS02090 5291d94441fa979e09a613d6ac2f3f2e 165 SUPERFAMILY SSF52172 1 141 1.25E-19 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS03960 025519a5036f34ad1186e8cce2fe3b0c 277 Gene3D G3DSA:2.40.50.140 56 209 5.6E-14 T 29-03-2018 AL539_RS03960 025519a5036f34ad1186e8cce2fe3b0c 277 PIRSF PIRSF012524 1 277 2.3E-97 T 29-03-2018 IPR014464 Conserved virulence factor B AL539_RS03960 025519a5036f34ad1186e8cce2fe3b0c 277 Pfam PF13509 S1 domain 71 132 1.2E-4 T 29-03-2018 AL539_RS03960 025519a5036f34ad1186e8cce2fe3b0c 277 Pfam PF13509 S1 domain 4 63 6.8E-24 T 29-03-2018 AL539_RS03960 025519a5036f34ad1186e8cce2fe3b0c 277 Gene3D G3DSA:1.10.10.10 218 276 3.2E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 9.9E-44 T 29-03-2018 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 Gene3D G3DSA:1.10.260.40 2 55 1.6E-21 T 29-03-2018 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.651 T 29-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 Gene3D G3DSA:3.40.50.2300 176 313 1.5E-46 T 29-03-2018 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 Gene3D G3DSA:3.40.50.2300 56 175 9.3E-33 T 29-03-2018 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 SMART SM00354 1 71 1.3E-38 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 SUPERFAMILY SSF53822 60 331 7.85E-95 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS17680 d6516012bdc902ca74146aa8f5abeb40 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS20740 c0afed1960744e7bf9a29017716a6243 282 Gene3D G3DSA:2.60.120.10 1 253 2.8E-69 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS20740 c0afed1960744e7bf9a29017716a6243 282 SUPERFAMILY SSF51182 6 280 1.72E-71 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS20740 c0afed1960744e7bf9a29017716a6243 282 Pfam PF02678 Pirin 23 121 1.7E-32 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL539_RS20740 c0afed1960744e7bf9a29017716a6243 282 PIRSF PIRSF006232 3 282 3.5E-82 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL539_RS20740 c0afed1960744e7bf9a29017716a6243 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 6.9E-27 T 29-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Pfam PF01556 DnaJ C terminal domain 124 336 1.1E-45 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 SUPERFAMILY SSF49493 262 347 7.85E-23 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Gene3D G3DSA:1.10.287.110 1 118 1.6E-35 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Pfam PF00684 DnaJ central domain 150 210 3.3E-15 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 SUPERFAMILY SSF49493 117 141 2.09E-19 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 SUPERFAMILY SSF49493 189 264 2.09E-19 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Gene3D G3DSA:2.60.260.20 201 257 2.6E-19 T 29-03-2018 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Gene3D G3DSA:2.10.230.10 148 200 1.2E-19 T 29-03-2018 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 SMART SM00271 4 62 1.5E-31 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 6.9E-141 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Pfam PF00226 DnaJ domain 5 67 4.2E-27 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 43.063 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 SUPERFAMILY SSF57938 137 213 1.96E-23 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 29-03-2018 IPR018253 DnaJ domain, conserved site AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 PRINTS PR00625 DnaJ domain signature 62 81 1.4E-32 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 PRINTS PR00625 DnaJ domain signature 25 40 1.4E-32 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 PRINTS PR00625 DnaJ domain signature 42 62 1.4E-32 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 PRINTS PR00625 DnaJ domain signature 7 25 1.4E-32 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 SUPERFAMILY SSF46565 1 113 2.49E-36 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15765 a015caaf030146f18ae6534895e516ad 382 Gene3D G3DSA:2.60.260.20 258 369 6.9E-29 T 29-03-2018 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 85 105 4.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 25 43 4.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 54 77 4.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 PRINTS PR00340 P-II protein signature 4 19 4.9E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.3E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 Gene3D G3DSA:3.30.70.120 1 110 1.7E-50 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 SUPERFAMILY SSF54913 3 114 3.81E-47 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 PIRSF PIRSF039144 3 114 7.2E-59 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS07670 4122625cbdbf19b2fb7cff589b129a66 114 SMART SM00938 6 107 1.6E-69 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 Gene3D G3DSA:3.40.50.1100 150 330 1.1E-50 T 29-03-2018 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 SUPERFAMILY SSF53686 16 366 2.1E-106 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 SUPERFAMILY SSF55021 338 424 2.52E-27 T 29-03-2018 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 1.2E-249 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 Gene3D G3DSA:3.40.1020.10 339 515 1.2E-72 T 29-03-2018 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 7.7E-83 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 SUPERFAMILY SSF55021 421 514 7.1E-27 T 29-03-2018 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 Gene3D G3DSA:3.40.50.1100 39 149 8.2E-32 T 29-03-2018 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 6.4E-27 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 5.1E-25 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL539_RS12110 7ae15009065d930f6298a19ca1c39847 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL539_RS16740 ffded3f9824ccb21433f90d461e2f771 255 Gene3D G3DSA:3.40.50.1820 6 255 1.6E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS16740 ffded3f9824ccb21433f90d461e2f771 255 SUPERFAMILY SSF53474 5 254 3.19E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS16740 ffded3f9824ccb21433f90d461e2f771 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 7.1E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS16740 ffded3f9824ccb21433f90d461e2f771 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.8E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS16740 ffded3f9824ccb21433f90d461e2f771 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.8E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS16740 ffded3f9824ccb21433f90d461e2f771 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.8E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS16740 ffded3f9824ccb21433f90d461e2f771 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.8E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS19115 516ee8a3943ba48b60b1d4c14b261720 152 Pfam PF00293 NUDIX domain 16 123 3.3E-18 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS19115 516ee8a3943ba48b60b1d4c14b261720 152 Gene3D G3DSA:3.90.79.10 3 141 7.9E-22 T 29-03-2018 AL539_RS19115 516ee8a3943ba48b60b1d4c14b261720 152 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS19115 516ee8a3943ba48b60b1d4c14b261720 152 SUPERFAMILY SSF55811 9 138 3.25E-24 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SUPERFAMILY SSF55785 476 600 6.44E-19 T 29-03-2018 IPR000014 PAS domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SMART SM00052 786 1033 2.0E-62 T 29-03-2018 IPR001633 EAL domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SUPERFAMILY SSF55785 354 477 1.0E-7 T 29-03-2018 IPR000014 PAS domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SUPERFAMILY SSF55073 618 774 1.73E-40 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 Gene3D G3DSA:3.30.450.20 350 472 5.7E-10 T 29-03-2018 AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SUPERFAMILY SSF141868 792 1039 1.12E-71 T 29-03-2018 IPR001633 EAL domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 770 3.4E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 Pfam PF00563 EAL domain 794 1028 7.7E-60 T 29-03-2018 IPR001633 EAL domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 Gene3D G3DSA:3.30.450.20 473 610 2.0E-23 T 29-03-2018 AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 4.3E-32 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SMART SM00086 564 602 0.21 T 29-03-2018 IPR001610 PAC motif AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SMART SM00086 437 479 14.0 T 29-03-2018 IPR001610 PAC motif AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 Gene3D G3DSA:3.30.70.270 611 775 6.0E-46 T 29-03-2018 AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SMART SM00267 602 774 8.8E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 Gene3D G3DSA:3.20.20.450 788 1041 1.2E-71 T 29-03-2018 IPR001633 EAL domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 362 486 7.4E-7 T 29-03-2018 IPR000014 PAS domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 488 609 7.1E-17 T 29-03-2018 IPR000014 PAS domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SMART SM00091 366 432 280.0 T 29-03-2018 IPR000014 PAS domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 SMART SM00091 491 558 0.0016 T 29-03-2018 IPR000014 PAS domain AL539_RS12585 01de9e7afa03fbbe6b88357224ce4af8 1041 Pfam PF13426 PAS domain 502 601 3.2E-10 T 29-03-2018 IPR000014 PAS domain AL539_RS17440 363fc44c1353708e69ff906c24003a82 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 1.6E-45 T 29-03-2018 IPR018639 Domain of unknown function DUF2062 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 470 631 6.2E-40 T 29-03-2018 IPR000160 GGDEF domain AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SMART SM00028 239 272 29.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SMART SM00028 195 228 100.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SMART SM00028 155 188 120.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SMART SM00028 361 394 110.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SMART SM00028 319 352 40.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SMART SM00267 461 634 8.8E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 Gene3D G3DSA:1.25.40.10 201 442 1.2E-21 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 Gene3D G3DSA:1.25.40.10 116 200 5.2E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 Pfam PF13374 Tetratricopeptide repeat 194 225 0.0041 T 29-03-2018 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SUPERFAMILY SSF48452 113 225 4.27E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 Gene3D G3DSA:3.30.70.270 466 637 2.0E-47 T 29-03-2018 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SUPERFAMILY SSF55073 477 634 1.1E-39 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 SUPERFAMILY SSF48452 194 413 1.71E-21 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS25985 86c9cdbf1b96618d8e7d1ef3faca9a9d 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 630 2.1E-36 T 29-03-2018 IPR000160 GGDEF domain AL539_RS06125 a6188bc8b5e710070bbabb5ed2448908 182 Gene3D G3DSA:3.40.50.850 1 182 1.9E-35 T 29-03-2018 AL539_RS06125 a6188bc8b5e710070bbabb5ed2448908 182 Pfam PF00857 Isochorismatase family 9 157 2.5E-29 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL539_RS06125 a6188bc8b5e710070bbabb5ed2448908 182 SUPERFAMILY SSF52499 3 182 3.66E-46 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL539_RS10195 b810075e3866059ef8512a88e881c0ba 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 63 2.0E-22 T 29-03-2018 IPR014318 Phage shock protein, PspG AL539_RS10195 b810075e3866059ef8512a88e881c0ba 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 1.6E-23 T 29-03-2018 IPR014318 Phage shock protein, PspG AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 PIRSF PIRSF001492 1 510 2.7E-202 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 SUPERFAMILY SSF64158 78 308 1.31E-80 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.479 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 Gene3D G3DSA:3.40.1450.10 78 307 3.4E-92 T 29-03-2018 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 SUPERFAMILY SSF53649 313 509 3.45E-76 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 SUPERFAMILY SSF53649 4 78 3.45E-76 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 1.5E-80 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 6.2E-229 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 Gene3D G3DSA:3.40.720.10 308 510 3.6E-38 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS10770 946cdd90b83c5ee5a970724485eb969a 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.4E-80 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL539_RS03980 5150e3538f6425796010dfa0a45827b9 160 Gene3D G3DSA:3.30.70.990 10 94 3.1E-30 T 29-03-2018 IPR035570 UPF0234 N-terminal domain AL539_RS03980 5150e3538f6425796010dfa0a45827b9 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.548 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AL539_RS03980 5150e3538f6425796010dfa0a45827b9 160 Gene3D G3DSA:3.30.70.860 95 159 3.9E-33 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain AL539_RS03980 5150e3538f6425796010dfa0a45827b9 160 SUPERFAMILY SSF89963 2 84 6.8E-31 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AL539_RS03980 5150e3538f6425796010dfa0a45827b9 160 SUPERFAMILY SSF89963 88 160 7.85E-29 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AL539_RS03980 5150e3538f6425796010dfa0a45827b9 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 8.4E-65 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.593 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.9E-127 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 Pfam PF07687 Peptidase dimerisation domain 174 285 1.0E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 9.9E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 Gene3D G3DSA:3.40.630.10 5 283 9.6E-51 T 29-03-2018 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 SUPERFAMILY SSF55031 177 290 1.64E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 SUPERFAMILY SSF53187 301 377 8.86E-57 T 29-03-2018 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 SUPERFAMILY SSF53187 3 176 8.86E-57 T 29-03-2018 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL539_RS10355 1d7f2417b9f565cf0038dad4caf3a69c 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL539_RS06965 6b77d36920e08a96cc5cc03eb8c6f6d1 559 SUPERFAMILY SSF50182 387 453 2.22E-18 T 29-03-2018 IPR010920 LSM domain AL539_RS06965 6b77d36920e08a96cc5cc03eb8c6f6d1 559 Gene3D G3DSA:3.30.70.100 454 547 7.2E-25 T 29-03-2018 AL539_RS06965 6b77d36920e08a96cc5cc03eb8c6f6d1 559 Gene3D G3DSA:2.30.30.60 403 453 6.2E-16 T 29-03-2018 AL539_RS06965 6b77d36920e08a96cc5cc03eb8c6f6d1 559 SUPERFAMILY SSF82689 456 552 9.94E-32 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL539_RS06965 6b77d36920e08a96cc5cc03eb8c6f6d1 559 Pfam PF00924 Mechanosensitive ion channel 351 542 6.0E-54 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL539_RS06965 6b77d36920e08a96cc5cc03eb8c6f6d1 559 SUPERFAMILY SSF82861 300 386 9.55E-14 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 SUPERFAMILY SSF53067 19 196 1.1E-50 T 29-03-2018 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 Gene3D G3DSA:3.30.420.40 211 360 1.0E-37 T 29-03-2018 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 Gene3D G3DSA:2.60.34.10 387 528 3.0E-49 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.7E-52 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 Pfam PF00012 Hsp70 protein 22 601 8.5E-189 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 SUPERFAMILY SSF53067 200 377 7.92E-50 T 29-03-2018 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 1.4E-268 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 SUPERFAMILY SSF100934 504 616 1.24E-34 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 Gene3D G3DSA:1.20.1270.10 529 616 2.0E-14 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 SUPERFAMILY SSF100920 384 537 1.19E-51 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.378 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL539_RS15320 83285834a9512dc0dab3d985527801b2 617 Gene3D G3DSA:3.30.420.40 19 210 5.8E-58 T 29-03-2018 AL539_RS06645 c94471e74024fb8a008afa9c85d8cc3b 85 Pfam PF02597 ThiS family 4 85 9.1E-21 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AL539_RS06645 c94471e74024fb8a008afa9c85d8cc3b 85 SUPERFAMILY SSF54285 1 85 1.42E-19 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL539_RS06645 c94471e74024fb8a008afa9c85d8cc3b 85 Gene3D G3DSA:3.10.20.30 1 85 3.3E-18 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS06645 c94471e74024fb8a008afa9c85d8cc3b 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 1.2E-20 T 29-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 AL539_RS19325 51e61e4f8c6cabd59e15d53dba26f26d 128 SUPERFAMILY SSF46894 25 120 1.25E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS19325 51e61e4f8c6cabd59e15d53dba26f26d 128 Gene3D G3DSA:1.10.10.10 4 126 5.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19325 51e61e4f8c6cabd59e15d53dba26f26d 128 SMART SM00862 43 119 3.8E-12 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS19325 51e61e4f8c6cabd59e15d53dba26f26d 128 Pfam PF00486 Transcriptional regulatory protein, C terminal 44 119 1.0E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS12575 dd53e2308adbb5ea74fcf4c124298ce0 680 Pfam PF01432 Peptidase family M3 222 677 8.8E-164 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL539_RS12575 dd53e2308adbb5ea74fcf4c124298ce0 680 Gene3D G3DSA:1.10.1370.10 140 430 1.1E-57 T 29-03-2018 AL539_RS12575 dd53e2308adbb5ea74fcf4c124298ce0 680 Gene3D G3DSA:1.10.1370.10 457 680 1.6E-69 T 29-03-2018 AL539_RS12575 dd53e2308adbb5ea74fcf4c124298ce0 680 SUPERFAMILY SSF55486 1 677 1.83E-213 T 29-03-2018 AL539_RS12575 dd53e2308adbb5ea74fcf4c124298ce0 680 Gene3D G3DSA:1.20.1050.40 5 138 4.1E-42 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 PIRSF PIRSF001553 1 289 2.4E-135 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 Gene3D G3DSA:3.40.50.261 120 289 1.2E-55 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 3.1E-146 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.0E-40 T 29-03-2018 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.0E-40 T 29-03-2018 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.0E-40 T 29-03-2018 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.0E-40 T 29-03-2018 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.491 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 Gene3D G3DSA:3.40.50.720 1 119 3.4E-45 T 29-03-2018 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 SMART SM00881 4 100 6.0E-36 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 Pfam PF00549 CoA-ligase 151 271 3.4E-22 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS16805 a858394863a4070255c48dd37c36f51f 290 SUPERFAMILY SSF52210 123 285 1.31E-55 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS13160 b599e7839223f9d627e9532763988061 78 Gene3D G3DSA:2.30.170.40 2 75 1.9E-28 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13160 b599e7839223f9d627e9532763988061 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.372 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13160 b599e7839223f9d627e9532763988061 78 SUPERFAMILY SSF143800 2 76 4.91E-30 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13160 b599e7839223f9d627e9532763988061 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.7E-28 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13160 b599e7839223f9d627e9532763988061 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS21470 1a14a16dc29a43b14ae46e54ba733bde 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 2.7E-40 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AL539_RS21470 1a14a16dc29a43b14ae46e54ba733bde 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 140 6.1E-8 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS21470 1a14a16dc29a43b14ae46e54ba733bde 144 Pfam PF00460 Flagella basal body rod protein 11 32 1.2E-5 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS14280 85a6c5b7eb40feeecbf909da4e6de16f 473 Pfam PF13657 HipA N-terminal domain 12 111 2.2E-16 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL539_RS14280 85a6c5b7eb40feeecbf909da4e6de16f 473 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 31 110 5.0E-12 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL539_RS14280 85a6c5b7eb40feeecbf909da4e6de16f 473 Pfam PF07804 HipA-like C-terminal domain 150 423 2.2E-43 T 29-03-2018 IPR012893 HipA-like, C-terminal AL539_RS23475 4dec8fd412f9695d196c0691af231f83 254 SUPERFAMILY SSF63380 10 103 8.6E-19 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS23475 4dec8fd412f9695d196c0691af231f83 254 Gene3D G3DSA:3.40.50.80 108 254 2.3E-23 T 29-03-2018 AL539_RS23475 4dec8fd412f9695d196c0691af231f83 254 SUPERFAMILY SSF52343 112 254 3.54E-34 T 29-03-2018 AL539_RS23475 4dec8fd412f9695d196c0691af231f83 254 Pfam PF00970 Oxidoreductase FAD-binding domain 23 96 5.4E-6 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL539_RS23475 4dec8fd412f9695d196c0691af231f83 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 228 2.2E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL539_RS23475 4dec8fd412f9695d196c0691af231f83 254 Gene3D G3DSA:2.40.30.10 7 103 4.9E-13 T 29-03-2018 AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 SUPERFAMILY SSF46689 6 80 1.75E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 65 190 8.5E-7 T 29-03-2018 IPR032551 HTH-type transcriptional repressor, C-terminal AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 Gene3D G3DSA:1.10.260.40 43 76 1.5E-9 T 29-03-2018 AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.2E-17 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 8.3E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 8.3E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS12435 8a96f40dcb1f3f2ced07556cb3f22743 193 Gene3D G3DSA:1.10.10.60 7 42 7.5E-19 T 29-03-2018 AL539_RS14840 8e4ac715aea870c0f96f5fa39d03c46c 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 50 98 1.6E-12 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL539_RS14840 8e4ac715aea870c0f96f5fa39d03c46c 262 SUPERFAMILY SSF54423 44 100 3.66E-14 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL539_RS14840 8e4ac715aea870c0f96f5fa39d03c46c 262 Gene3D G3DSA:3.10.450.70 41 101 1.2E-15 T 29-03-2018 AL539_RS14840 8e4ac715aea870c0f96f5fa39d03c46c 262 Pfam PF13098 Thioredoxin-like domain 132 259 2.0E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS14840 8e4ac715aea870c0f96f5fa39d03c46c 262 SUPERFAMILY SSF52833 121 261 3.58E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS14840 8e4ac715aea870c0f96f5fa39d03c46c 262 Gene3D G3DSA:3.40.30.10 121 262 1.9E-24 T 29-03-2018 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.4E-224 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 SUPERFAMILY SSF55681 3 254 1.49E-108 T 29-03-2018 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 Gene3D G3DSA:3.30.980.10 552 702 5.9E-48 T 29-03-2018 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 SUPERFAMILY SSF50447 453 551 6.36E-17 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.1E-18 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 Gene3D G3DSA:3.30.930.10 2 251 3.4E-118 T 29-03-2018 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 Gene3D G3DSA:1.20.5.170 703 813 7.5E-4 T 29-03-2018 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 SUPERFAMILY SSF101353 255 462 2.09E-60 T 29-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.561 T 29-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 SMART SM00863 652 695 3.9E-22 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 Pfam PF02272 DHHA1 domain 722 854 4.1E-27 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL539_RS08910 0ca833657ad31c0688429ea09b833293 860 SUPERFAMILY SSF55186 551 710 1.03E-53 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 2.4E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 2.4E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 2.4E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 Gene3D G3DSA:2.60.120.260 439 592 9.5E-29 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 29-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 SUPERFAMILY SSF52743 23 290 1.17E-58 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 SUPERFAMILY SSF52743 330 432 1.17E-58 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 Pfam PF00082 Subtilase family 65 380 1.0E-30 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 Gene3D G3DSA:3.40.50.200 16 436 9.6E-57 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 Pfam PF01483 Proprotein convertase P-domain 475 555 7.6E-20 T 29-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AL539_RS25975 61de150948e83cee9d22d1c839d2bc77 592 SUPERFAMILY SSF49785 438 592 3.61E-25 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS09185 196057ef3af5170915d27c68a7156656 345 SUPERFAMILY SSF55347 159 321 1.07E-58 T 29-03-2018 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 4.3E-191 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 Gene3D G3DSA:3.40.50.720 1 168 4.5E-64 T 29-03-2018 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 Gene3D G3DSA:3.30.360.10 169 322 1.5E-51 T 29-03-2018 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 SMART SM00846 2 159 6.5E-75 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 SUPERFAMILY SSF51735 2 183 2.98E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS09185 196057ef3af5170915d27c68a7156656 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 2.7E-32 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 PIRSF PIRSF000149 1 342 4.1E-128 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 66.017 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.6E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.6E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.6E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.6E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.6E-30 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09185 196057ef3af5170915d27c68a7156656 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.9E-55 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS18610 b79391bed1f1590075f81286ac46c86d 569 Gene3D G3DSA:3.40.190.10 262 383 1.6E-8 T 29-03-2018 AL539_RS18610 b79391bed1f1590075f81286ac46c86d 569 Gene3D G3DSA:3.40.30.10 422 475 9.7E-5 T 29-03-2018 AL539_RS18610 b79391bed1f1590075f81286ac46c86d 569 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 2.5E-19 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS18610 b79391bed1f1590075f81286ac46c86d 569 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 8.0E-37 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL539_RS18610 b79391bed1f1590075f81286ac46c86d 569 SUPERFAMILY SSF53850 117 559 3.26E-63 T 29-03-2018 AL539_RS18610 b79391bed1f1590075f81286ac46c86d 569 Gene3D G3DSA:3.90.76.10 131 261 1.7E-21 T 29-03-2018 AL539_RS03885 89e0ccdc9f6cdb81dcc35bdf60585992 80 Gene3D G3DSA:3.40.30.10 1 73 7.4E-9 T 29-03-2018 AL539_RS03885 89e0ccdc9f6cdb81dcc35bdf60585992 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 71 4.0E-19 T 29-03-2018 IPR008554 Glutaredoxin-like AL539_RS03885 89e0ccdc9f6cdb81dcc35bdf60585992 80 SUPERFAMILY SSF52833 1 73 3.01E-13 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS19785 7d10d460e898f600e4646211d8a8cc1f 273 Pfam PF00005 ABC transporter 31 179 2.9E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS19785 7d10d460e898f600e4646211d8a8cc1f 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS19785 7d10d460e898f600e4646211d8a8cc1f 273 SUPERFAMILY SSF52540 13 251 6.91E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19785 7d10d460e898f600e4646211d8a8cc1f 273 Gene3D G3DSA:3.40.50.300 2 250 3.4E-50 T 29-03-2018 AL539_RS19785 7d10d460e898f600e4646211d8a8cc1f 273 SMART SM00382 40 236 1.6E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 Pfam PF00753 Metallo-beta-lactamase superfamily 120 345 1.9E-35 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 Gene3D G3DSA:3.60.15.10 96 391 2.8E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 SUPERFAMILY SSF55718 530 651 6.59E-36 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 Pfam PF14863 Alkyl sulfatase dimerisation 384 520 7.6E-55 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 Pfam PF14864 Alkyl sulfatase C-terminal 529 651 6.4E-38 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 Gene3D G3DSA:3.30.1050.10 525 651 1.3E-28 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 SMART SM00849 123 345 2.9E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS09330 3c45f0feb7c3073811fe755ff82c146f 651 SUPERFAMILY SSF56281 22 522 5.6E-153 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 Pfam PF00753 Metallo-beta-lactamase superfamily 120 345 1.9E-35 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 Gene3D G3DSA:3.60.15.10 96 391 2.8E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 SUPERFAMILY SSF55718 530 651 6.59E-36 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 Pfam PF14863 Alkyl sulfatase dimerisation 384 520 7.6E-55 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 Pfam PF14864 Alkyl sulfatase C-terminal 529 651 6.4E-38 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 Gene3D G3DSA:3.30.1050.10 525 651 1.3E-28 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 SMART SM00849 123 345 2.9E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS09485 3c45f0feb7c3073811fe755ff82c146f 651 SUPERFAMILY SSF56281 22 522 5.6E-153 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS19595 ede7d41f02a37db8731052dd2e36b5ae 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS19595 ede7d41f02a37db8731052dd2e36b5ae 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 9.7E-203 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL539_RS19595 ede7d41f02a37db8731052dd2e36b5ae 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 4.7E-176 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS19595 ede7d41f02a37db8731052dd2e36b5ae 486 SUPERFAMILY SSF53720 5 480 1.05E-171 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS19595 ede7d41f02a37db8731052dd2e36b5ae 486 Gene3D G3DSA:3.40.309.10 263 460 4.1E-71 T 29-03-2018 AL539_RS19595 ede7d41f02a37db8731052dd2e36b5ae 486 Gene3D G3DSA:3.40.605.10 2 262 2.1E-100 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS19595 ede7d41f02a37db8731052dd2e36b5ae 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.433 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL539_RS13585 e6172b282c35510ea5bb47df4d577600 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.1E-41 T 29-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13585 e6172b282c35510ea5bb47df4d577600 179 Gene3D G3DSA:3.30.1440.10 1 179 2.5E-80 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13585 e6172b282c35510ea5bb47df4d577600 179 PIRSF PIRSF002161 1 179 4.4E-66 T 29-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13585 e6172b282c35510ea5bb47df4d577600 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.113 T 29-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13585 e6172b282c35510ea5bb47df4d577600 179 Pfam PF00281 Ribosomal protein L5 24 80 2.4E-29 T 29-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13585 e6172b282c35510ea5bb47df4d577600 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 29-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13585 e6172b282c35510ea5bb47df4d577600 179 SUPERFAMILY SSF55282 4 179 1.04E-78 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS06665 5f1859e2f1f2e0a869e336b6032dc78a 298 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.764 T 29-03-2018 IPR010119 Gluconeogenesis factor AL539_RS06665 5f1859e2f1f2e0a869e336b6032dc78a 298 Gene3D G3DSA:3.40.50.10680 86 296 1.4E-42 T 29-03-2018 AL539_RS06665 5f1859e2f1f2e0a869e336b6032dc78a 298 SUPERFAMILY SSF142338 6 290 4.05E-83 T 29-03-2018 AL539_RS06665 5f1859e2f1f2e0a869e336b6032dc78a 298 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 2.8E-76 T 29-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AL539_RS06665 5f1859e2f1f2e0a869e336b6032dc78a 298 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 278 1.3E-102 T 29-03-2018 IPR010119 Gluconeogenesis factor AL539_RS23185 3530c7c781bedcaf6f34072df8357adb 456 SUPERFAMILY SSF143548 16 155 1.02E-43 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL539_RS23185 3530c7c781bedcaf6f34072df8357adb 456 Gene3D G3DSA:3.30.1330.90 10 156 9.6E-49 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL539_RS23185 3530c7c781bedcaf6f34072df8357adb 456 Pfam PF03313 Serine dehydratase alpha chain 184 447 4.3E-95 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AL539_RS23185 3530c7c781bedcaf6f34072df8357adb 456 Pfam PF03315 Serine dehydratase beta chain 3 153 1.7E-51 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL539_RS23185 3530c7c781bedcaf6f34072df8357adb 456 Gene3D G3DSA:1.10.4100.10 267 423 4.6E-29 T 29-03-2018 AL539_RS23185 3530c7c781bedcaf6f34072df8357adb 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 1.5E-196 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL539_RS13285 901bb3b2cf400505071f2f1b018d4f02 253 Pfam PF06251 Capsule biosynthesis GfcC 34 246 1.1E-19 T 29-03-2018 IPR010425 Domain of unknown function DUF1017 AL539_RS20375 1dfd5c7d4bcfa9cbca56c23f8df67712 192 PIRSF PIRSF000013 1 192 1.6E-90 T 29-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AL539_RS20375 1dfd5c7d4bcfa9cbca56c23f8df67712 192 Gene3D G3DSA:1.10.468.10 58 190 1.5E-26 T 29-03-2018 AL539_RS20375 1dfd5c7d4bcfa9cbca56c23f8df67712 192 SUPERFAMILY SSF48695 16 191 2.47E-55 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS20375 1dfd5c7d4bcfa9cbca56c23f8df67712 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 1.8E-69 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SUPERFAMILY SSF158472 180 228 1.57E-7 T 29-03-2018 AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SUPERFAMILY SSF55073 489 642 2.35E-45 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SUPERFAMILY SSF55785 347 455 1.77E-13 T 29-03-2018 IPR000014 PAS domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Pfam PF13426 PAS domain 259 350 9.5E-5 T 29-03-2018 IPR000014 PAS domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SMART SM00267 473 644 5.4E-58 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 3.6E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 1.8E-46 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Gene3D G3DSA:3.30.70.270 496 652 1.0E-55 T 29-03-2018 AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Pfam PF00989 PAS fold 363 408 3.6E-7 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SMART SM00304 180 233 6.1E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Gene3D G3DSA:3.30.450.20 360 495 1.9E-17 T 29-03-2018 AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Pfam PF00672 HAMP domain 180 228 3.3E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Pfam PF17152 Periplasmic sensor domain 37 142 4.3E-9 T 29-03-2018 IPR033417 Periplasmic sensor domain CHASE8 AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SMART SM00091 359 425 3.8E-9 T 29-03-2018 IPR000014 PAS domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SMART SM00091 247 313 0.0047 T 29-03-2018 IPR000014 PAS domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 247 354 5.3E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 2.8E-11 T 29-03-2018 IPR000014 PAS domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 SUPERFAMILY SSF55785 234 349 6.47E-9 T 29-03-2018 IPR000014 PAS domain AL539_RS18530 8ec5b3acaefa4d41636fcfe707929e50 652 Gene3D G3DSA:3.30.450.20 231 359 5.9E-12 T 29-03-2018 AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 Gene3D G3DSA:3.40.50.720 2 235 1.9E-40 T 29-03-2018 AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 SUPERFAMILY SSF51735 3 235 6.27E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 8.4E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 8.4E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 8.4E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 8.4E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 8.4E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS21745 52fe32ca39efe2e109e0660a3b360646 235 Pfam PF00106 short chain dehydrogenase 3 191 2.8E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22985 040312de9fe479508a9537c256d5358b 236 SMART SM00382 34 221 2.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS22985 040312de9fe479508a9537c256d5358b 236 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS22985 040312de9fe479508a9537c256d5358b 236 Pfam PF00005 ABC transporter 25 170 3.5E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS22985 040312de9fe479508a9537c256d5358b 236 SUPERFAMILY SSF52540 5 219 6.62E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22985 040312de9fe479508a9537c256d5358b 236 Gene3D G3DSA:3.40.50.300 1 233 1.3E-55 T 29-03-2018 AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 Pfam PF00005 ABC transporter 43 195 3.9E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 Gene3D G3DSA:3.40.50.300 1 279 4.3E-65 T 29-03-2018 AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 Gene3D G3DSA:3.10.580.10 281 390 3.1E-4 T 29-03-2018 AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 SUPERFAMILY SSF52540 42 273 3.94E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 SUPERFAMILY SSF54631 329 386 2.75E-5 T 29-03-2018 AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 SMART SM00382 52 253 4.1E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS19575 510c15d7e24da76eef2c99c8954be12e 392 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 384 3.2E-180 T 29-03-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 SUPERFAMILY SSF46894 135 194 2.01E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 Gene3D G3DSA:3.40.50.2300 6 142 2.9E-18 T 29-03-2018 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 SMART SM00448 6 119 1.3E-13 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 Pfam PF00072 Response regulator receiver domain 8 119 1.7E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 Gene3D G3DSA:1.10.10.10 143 198 3.8E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 194 5.0E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 SUPERFAMILY SSF52172 7 132 7.68E-19 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 SMART SM00421 139 196 2.9E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.3E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.3E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19170 9a429e3e06e3a11ec5667b7f371e9773 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.3E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS14510 d3d910d833113b5c66aa23ac3ab32788 196 Pfam PF13580 SIS domain 9 144 1.9E-34 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS14510 d3d910d833113b5c66aa23ac3ab32788 196 SUPERFAMILY SSF53697 1 191 1.44E-56 T 29-03-2018 AL539_RS14510 d3d910d833113b5c66aa23ac3ab32788 196 Gene3D G3DSA:3.40.50.10490 1 194 2.1E-38 T 29-03-2018 AL539_RS14510 d3d910d833113b5c66aa23ac3ab32788 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.331 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL539_RS25445 33016c7c393982fa59207e3ac90808b6 137 Pfam PF09905 DNA-binding protein VF530 11 73 2.2E-31 T 29-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AL539_RS25445 33016c7c393982fa59207e3ac90808b6 137 Gene3D G3DSA:1.10.720.30 19 75 2.0E-26 T 29-03-2018 IPR003034 SAP domain AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 Gene3D G3DSA:3.90.950.20 245 390 0.023 T 29-03-2018 AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 Gene3D G3DSA:3.40.980.10 1 170 1.1E-33 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 SUPERFAMILY SSF142433 252 386 1.57E-7 T 29-03-2018 IPR008136 CinA, C-terminal AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 101.919 T 29-03-2018 IPR008135 Competence-induced protein CinA AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 404 4.8E-74 T 29-03-2018 IPR008135 Competence-induced protein CinA AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 PIRSF PIRSF006728 1 391 1.2E-111 T 29-03-2018 IPR008135 Competence-induced protein CinA AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 SUPERFAMILY SSF53218 2 204 5.89E-34 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 SMART SM00852 4 171 3.6E-30 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS05855 fa31ddcbb48d439a0fd39536167a7233 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.3E-28 T 29-03-2018 IPR001453 MoaB/Mog domain AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 SUPERFAMILY SSF143968 323 461 3.92E-53 T 29-03-2018 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 Gene3D G3DSA:1.20.5.570 589 616 1.0E-15 T 29-03-2018 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 Gene3D G3DSA:3.40.1670.10 470 588 1.6E-28 T 29-03-2018 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 Gene3D G3DSA:3.40.1670.10 323 468 7.4E-45 T 29-03-2018 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 1.3E-164 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 4.3E-162 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 567 8.7E-22 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 SUPERFAMILY SSF143968 473 615 1.83E-36 T 29-03-2018 AL539_RS11670 00ea83fad8b5ae864a10db863ed1c47f 617 SUPERFAMILY SSF50475 3 322 3.53E-122 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS16505 3328d891c7753b77c71d1887cfc8f27b 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 3.4E-95 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AL539_RS16505 3328d891c7753b77c71d1887cfc8f27b 397 Gene3D G3DSA:1.20.1330.10 40 372 4.7E-22 T 29-03-2018 AL539_RS16505 3328d891c7753b77c71d1887cfc8f27b 397 SUPERFAMILY SSF64518 3 397 1.31E-68 T 29-03-2018 AL539_RS16505 3328d891c7753b77c71d1887cfc8f27b 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.0E-13 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS22965 e45a11669f4cfa0d916d77bc6fe48b10 195 Pfam PF13302 Acetyltransferase (GNAT) domain 18 162 7.7E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS22965 e45a11669f4cfa0d916d77bc6fe48b10 195 SUPERFAMILY SSF55729 15 186 1.38E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS22965 e45a11669f4cfa0d916d77bc6fe48b10 195 Gene3D G3DSA:3.40.630.30 14 189 2.6E-22 T 29-03-2018 AL539_RS23905 b582021b49bad2ecc818d862783ed7c6 299 SUPERFAMILY SSF46785 1 87 1.72E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23905 b582021b49bad2ecc818d862783ed7c6 299 Pfam PF03466 LysR substrate binding domain 88 291 8.5E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS23905 b582021b49bad2ecc818d862783ed7c6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.7E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23905 b582021b49bad2ecc818d862783ed7c6 299 SUPERFAMILY SSF53850 88 292 2.53E-42 T 29-03-2018 AL539_RS23905 b582021b49bad2ecc818d862783ed7c6 299 Gene3D G3DSA:1.10.10.10 1 83 6.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23905 b582021b49bad2ecc818d862783ed7c6 299 Gene3D G3DSA:3.40.190.10 174 260 8.8E-25 T 29-03-2018 AL539_RS23905 b582021b49bad2ecc818d862783ed7c6 299 Gene3D G3DSA:3.40.190.10 87 173 8.8E-12 T 29-03-2018 AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 Gene3D G3DSA:3.30.700.10 24 141 6.9E-31 T 29-03-2018 AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 2.8E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 SUPERFAMILY SSF54523 36 142 2.67E-38 T 29-03-2018 AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.3E-42 T 29-03-2018 IPR013545 Type II secretion system protein G AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 1.3E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS12905 6b2cd9d0f0a6e1647e71f948810abf9d 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.0E-57 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 Gene3D G3DSA:3.30.460.10 18 178 3.8E-52 T 29-03-2018 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 328 445 2.9E-38 T 29-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 209 270 2.5E-21 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 SUPERFAMILY SSF81891 180 417 3.01E-48 T 29-03-2018 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 SUPERFAMILY SSF81301 24 179 3.16E-40 T 29-03-2018 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 Pfam PF01743 Poly A polymerase head domain 52 182 5.6E-39 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 452 6.9E-163 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 Gene3D G3DSA:1.10.3090.10 180 428 4.7E-42 T 29-03-2018 AL539_RS08645 fe4bea4f237f3ed41b40da30634d2fbe 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 8 452 37.715 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL539_RS01810 a208ccda8bfc231ec94ca157110fb182 343 SUPERFAMILY SSF111369 47 264 7.85E-32 T 29-03-2018 AL539_RS01810 a208ccda8bfc231ec94ca157110fb182 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 5.5E-84 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS01810 a208ccda8bfc231ec94ca157110fb182 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 258 7.2E-13 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS01810 a208ccda8bfc231ec94ca157110fb182 343 Gene3D G3DSA:1.10.287.470 96 146 2.2E-13 T 29-03-2018 AL539_RS01810 a208ccda8bfc231ec94ca157110fb182 343 Gene3D G3DSA:2.40.50.100 67 87 0.0046 T 29-03-2018 AL539_RS01810 a208ccda8bfc231ec94ca157110fb182 343 Gene3D G3DSA:2.40.50.100 147 315 1.7E-4 T 29-03-2018 AL539_RS12540 d6bd73bf87ba4c38b5a0cb19c98c4934 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 161 5.7E-64 T 29-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AL539_RS12540 d6bd73bf87ba4c38b5a0cb19c98c4934 174 SUPERFAMILY SSF52540 4 159 2.04E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12540 d6bd73bf87ba4c38b5a0cb19c98c4934 174 Gene3D G3DSA:3.40.50.300 4 172 6.5E-29 T 29-03-2018 AL539_RS12540 d6bd73bf87ba4c38b5a0cb19c98c4934 174 Pfam PF01202 Shikimate kinase 13 144 7.8E-14 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 9.2E-105 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 Gene3D G3DSA:3.10.290.10 2 76 3.8E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 SUPERFAMILY SSF55120 77 316 1.91E-80 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 SMART SM00363 18 83 1.2E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.9E-30 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 SUPERFAMILY SSF55174 17 68 7.06E-11 T 29-03-2018 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 Gene3D G3DSA:3.30.2350.10 83 316 9.5E-69 T 29-03-2018 AL539_RS15070 609282a5834c2826b9e91f549640766d 325 Pfam PF01479 S4 domain 18 65 4.5E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS04515 f60b20ef170a7de2243b49134c27616c 119 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 2.0E-46 T 29-03-2018 IPR013348 Type III secretion system YscG GO:0009405 AL539_RS04515 f60b20ef170a7de2243b49134c27616c 119 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 9.8E-45 T 29-03-2018 IPR013348 Type III secretion system YscG GO:0009405 AL539_RS04515 f60b20ef170a7de2243b49134c27616c 119 Gene3D G3DSA:1.25.40.10 2 115 1.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 Gene3D G3DSA:3.30.450.90 88 225 3.4E-49 T 29-03-2018 AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 SUPERFAMILY SSF160246 12 78 2.12E-17 T 29-03-2018 AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 Gene3D G3DSA:3.40.50.300 226 500 3.4E-66 T 29-03-2018 AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 Pfam PF00437 Type II/IV secretion system protein 127 392 2.5E-91 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 2.1E-227 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 SMART SM00382 253 376 5.4E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS12895 a6908b615ad8b4a7ddfa0ac37266cfb8 500 SUPERFAMILY SSF52540 107 497 2.21E-107 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 Gene3D G3DSA:1.10.260.40 2 55 3.2E-22 T 29-03-2018 AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 SMART SM00354 1 71 7.9E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 Gene3D G3DSA:3.40.50.2300 56 175 6.9E-28 T 29-03-2018 AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.0E-39 T 29-03-2018 AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 SUPERFAMILY SSF53822 60 332 1.79E-88 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 SUPERFAMILY SSF47413 1 59 2.16E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.4E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS13500 659741aaebcfd905a30c7856c5a1ddb7 335 Gene3D G3DSA:3.40.50.2300 176 317 3.9E-46 T 29-03-2018 AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 SMART SM00491 477 606 5.7E-46 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 Pfam PF13307 Helicase C-terminal domain 462 619 8.3E-34 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 SUPERFAMILY SSF52540 42 89 2.83E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 SUPERFAMILY SSF52540 480 545 2.83E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 SUPERFAMILY SSF52540 576 602 2.83E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 SUPERFAMILY SSF52540 14 236 1.44E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 1.7E-5 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 Gene3D G3DSA:3.40.50.300 445 635 1.8E-12 T 29-03-2018 AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 Gene3D G3DSA:3.40.50.300 18 424 4.9E-29 T 29-03-2018 AL539_RS16875 9797c864292531c66b2650b0fb32950e 646 SMART SM00487 17 302 0.004 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS10800 dacdd80b12bf9dc92645f0e261403cff 318 SUPERFAMILY SSF64182 5 317 2.49E-47 T 29-03-2018 AL539_RS06755 d15dc44441fc7bd9c11cca33699640d7 441 Pfam PF03553 Na+/H+ antiporter family 150 435 5.3E-75 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL539_RS06755 d15dc44441fc7bd9c11cca33699640d7 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 4.0E-6 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06755 d15dc44441fc7bd9c11cca33699640d7 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 4.0E-6 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06755 d15dc44441fc7bd9c11cca33699640d7 441 Pfam PF13726 Na+-H+ antiporter family 2 88 4.5E-35 T 29-03-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal AL539_RS25215 f954bc3d148e05396b3a5f4d568eafe8 300 SUPERFAMILY SSF103481 49 141 8.63E-5 T 29-03-2018 AL539_RS25215 f954bc3d148e05396b3a5f4d568eafe8 300 SUPERFAMILY SSF103481 194 290 2.88E-7 T 29-03-2018 AL539_RS25215 f954bc3d148e05396b3a5f4d568eafe8 300 Pfam PF00892 EamA-like transporter family 160 287 1.3E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 6.6E-255 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 Gene3D G3DSA:1.10.560.10 1 184 9.1E-44 T 29-03-2018 IPR027413 GroEL-like equatorial domain AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.0E-73 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.0E-73 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.0E-73 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.0E-73 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.0E-73 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 SUPERFAMILY SSF48592 3 230 1.31E-65 T 29-03-2018 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 Gene3D G3DSA:1.10.560.10 374 516 2.2E-25 T 29-03-2018 IPR027413 GroEL-like equatorial domain AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 SUPERFAMILY SSF48592 373 525 6.56E-33 T 29-03-2018 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 SUPERFAMILY SSF52029 185 376 2.99E-83 T 29-03-2018 IPR027409 GroEL-like apical domain AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.569 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 Gene3D G3DSA:3.50.7.10 185 373 1.8E-97 T 29-03-2018 IPR027409 GroEL-like apical domain AL539_RS10865 2c94c68855b28d18cbe4e3ee693af303 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.3E-98 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AL539_RS14085 c019ef01af1264b8e03c3956e07c399b 693 SUPERFAMILY SSF53098 262 406 5.88E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS14085 c019ef01af1264b8e03c3956e07c399b 693 Pfam PF00665 Integrase core domain 264 403 9.9E-11 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL539_RS14085 c019ef01af1264b8e03c3956e07c399b 693 Pfam PF09299 Mu transposase, C-terminal 496 555 3.7E-6 T 29-03-2018 IPR015378 Transposase-like, Mu, C-terminal AL539_RS14085 c019ef01af1264b8e03c3956e07c399b 693 Gene3D G3DSA:3.30.420.10 253 492 4.8E-25 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 41 341 8.6E-96 T 29-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 SUPERFAMILY SSF49899 343 459 8.7E-19 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 SMART SM00640 41 444 2.5E-141 T 29-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 41 54 - T 29-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 Gene3D G3DSA:2.115.10.20 46 362 2.4E-93 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 SUPERFAMILY SSF75005 33 341 3.45E-99 T 29-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 Gene3D G3DSA:2.60.120.560 363 464 9.1E-15 T 29-03-2018 AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 361 455 1.4E-12 T 29-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AL539_RS20795 0608bc16b2d9de0b4c09a9c003974fd3 484 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 25 455 2.5E-187 T 29-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AL539_RS10975 fe3a5cef7aa2fd567cc313417f9ff309 395 Pfam PF12832 MFS_1 like family 13 360 3.4E-38 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain AL539_RS10975 fe3a5cef7aa2fd567cc313417f9ff309 395 SUPERFAMILY SSF103473 8 373 7.06E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS10975 fe3a5cef7aa2fd567cc313417f9ff309 395 PIRSF PIRSF004925 1 388 1.7E-102 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AL539_RS10975 fe3a5cef7aa2fd567cc313417f9ff309 395 Gene3D G3DSA:1.20.1250.20 1 192 3.5E-11 T 29-03-2018 AL539_RS10975 fe3a5cef7aa2fd567cc313417f9ff309 395 Gene3D G3DSA:1.20.1250.20 193 375 1.1E-6 T 29-03-2018 AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 1.1E-85 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.945 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 Gene3D G3DSA:1.20.1640.10 60 299 5.5E-32 T 29-03-2018 AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 4.5E-56 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 Pfam PF02355 Protein export membrane protein 113 292 3.7E-70 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_RS15270 06253b4668056cac5035ba7e2ac82028 315 SUPERFAMILY SSF82866 73 293 4.71E-41 T 29-03-2018 AL539_RS22945 db188dca146165d10b1c8089301e1381 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 11 98 5.8E-5 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS11510 fd9cbf165f86e09f11b5fb6ea2e60984 164 SUPERFAMILY SSF52799 13 161 1.77E-31 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL539_RS11510 fd9cbf165f86e09f11b5fb6ea2e60984 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 29-03-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AL539_RS11510 fd9cbf165f86e09f11b5fb6ea2e60984 164 Gene3D G3DSA:3.90.190.10 24 164 1.0E-19 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL539_RS11510 fd9cbf165f86e09f11b5fb6ea2e60984 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 29 128 2.4E-8 T 29-03-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 SUPERFAMILY SSF52540 144 334 5.32E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 SUPERFAMILY SSF46689 349 401 7.17E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 Gene3D G3DSA:1.10.8.60 277 323 2.4E-11 T 29-03-2018 AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 Gene3D G3DSA:1.10.10.60 324 405 2.0E-10 T 29-03-2018 AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 SMART SM00448 3 114 1.3E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 SUPERFAMILY SSF52172 5 187 7.83E-39 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 Pfam PF00072 Response regulator receiver domain 5 114 1.5E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 Pfam PF02954 Bacterial regulatory protein, Fis family 361 398 2.3E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS22775 18b437db15cb503b0de4469a00a5b4cb 407 Gene3D G3DSA:3.40.50.2300 4 136 4.7E-33 T 29-03-2018 AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 SUPERFAMILY SSF54893 2 100 9.03E-36 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 3.6E-19 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Gene3D G3DSA:3.30.70.140 5 97 1.5E-33 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.0E-30 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.847 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Gene3D G3DSA:2.30.30.20 102 150 1.2E-17 T 29-03-2018 AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 4.7E-61 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL539_RS09865 5f9f0fbdd9a0eb37cf77c248c3d59237 153 SUPERFAMILY SSF57825 101 151 6.8E-16 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AL539_RS24040 d600c6eff626478d2e6cd5dbc8fb1b75 308 Gene3D G3DSA:3.10.350.10 44 92 1.3E-7 T 29-03-2018 AL539_RS24040 d600c6eff626478d2e6cd5dbc8fb1b75 308 SUPERFAMILY SSF141523 102 238 6.15E-30 T 29-03-2018 AL539_RS24040 d600c6eff626478d2e6cd5dbc8fb1b75 308 SMART SM00257 47 91 0.0011 T 29-03-2018 IPR018392 LysM domain AL539_RS24040 d600c6eff626478d2e6cd5dbc8fb1b75 308 SUPERFAMILY SSF54106 47 91 1.57E-6 T 29-03-2018 IPR018392 LysM domain AL539_RS24040 d600c6eff626478d2e6cd5dbc8fb1b75 308 Pfam PF03734 L,D-transpeptidase catalytic domain 103 238 2.1E-22 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL539_RS24040 d600c6eff626478d2e6cd5dbc8fb1b75 308 Pfam PF01476 LysM domain 48 91 1.4E-6 T 29-03-2018 IPR018392 LysM domain AL539_RS24040 d600c6eff626478d2e6cd5dbc8fb1b75 308 Gene3D G3DSA:2.40.440.10 99 240 2.6E-31 T 29-03-2018 AL539_RS17155 a7f02741a23b19e5b22890165846ee0e 97 Gene3D G3DSA:1.10.150.310 54 96 1.3E-15 T 29-03-2018 AL539_RS17155 a7f02741a23b19e5b22890165846ee0e 97 SUPERFAMILY SSF47781 31 97 4.78E-28 T 29-03-2018 IPR010994 RuvA domain 2-like AL539_RS17155 a7f02741a23b19e5b22890165846ee0e 97 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 35 97 5.8E-28 T 29-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AL539_RS17155 a7f02741a23b19e5b22890165846ee0e 97 Pfam PF12836 Helix-hairpin-helix motif 35 95 4.5E-23 T 29-03-2018 AL539_RS17155 a7f02741a23b19e5b22890165846ee0e 97 Gene3D G3DSA:1.10.150.20 19 53 3.0E-10 T 29-03-2018 AL539_RS17155 a7f02741a23b19e5b22890165846ee0e 97 SMART SM00278 45 64 5.2 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS17155 a7f02741a23b19e5b22890165846ee0e 97 SMART SM00278 75 94 88.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS25190 e531a13c389817300fbd37a60793c642 159 SUPERFAMILY SSF47240 4 158 3.12E-44 T 29-03-2018 IPR009078 Ferritin-like superfamily AL539_RS25190 e531a13c389817300fbd37a60793c642 159 Pfam PF00210 Ferritin-like domain 20 158 1.7E-24 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL539_RS25190 e531a13c389817300fbd37a60793c642 159 Gene3D G3DSA:1.20.1260.10 8 159 1.4E-41 T 29-03-2018 IPR012347 Ferritin-related AL539_RS25190 e531a13c389817300fbd37a60793c642 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL539_RS25190 e531a13c389817300fbd37a60793c642 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 5.3E-14 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL539_RS25190 e531a13c389817300fbd37a60793c642 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 5.3E-14 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL539_RS25190 e531a13c389817300fbd37a60793c642 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 5.3E-14 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL539_RS25190 e531a13c389817300fbd37a60793c642 159 PIRSF PIRSF005900 1 159 6.7E-46 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AL539_RS25190 e531a13c389817300fbd37a60793c642 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL539_RS25235 9433fc996740af94cbebe105a86f6eef 655 Gene3D G3DSA:3.40.50.980 93 282 1.7E-32 T 29-03-2018 AL539_RS25235 9433fc996740af94cbebe105a86f6eef 655 Gene3D G3DSA:3.30.300.30 531 654 5.8E-13 T 29-03-2018 AL539_RS25235 9433fc996740af94cbebe105a86f6eef 655 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS25235 9433fc996740af94cbebe105a86f6eef 655 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 649 2.0E-237 T 29-03-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AL539_RS25235 9433fc996740af94cbebe105a86f6eef 655 SUPERFAMILY SSF56801 37 632 6.02E-124 T 29-03-2018 AL539_RS25235 9433fc996740af94cbebe105a86f6eef 655 Pfam PF00501 AMP-binding enzyme 106 532 1.7E-47 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS25235 9433fc996740af94cbebe105a86f6eef 655 Gene3D G3DSA:3.40.50.980 283 442 2.4E-23 T 29-03-2018 AL539_RS09695 8dd002e6c5c9c3d8c35d5df921080815 477 Gene3D G3DSA:3.40.605.10 5 267 7.9E-90 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS09695 8dd002e6c5c9c3d8c35d5df921080815 477 SUPERFAMILY SSF53720 16 474 9.29E-153 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS09695 8dd002e6c5c9c3d8c35d5df921080815 477 Pfam PF00171 Aldehyde dehydrogenase family 18 470 1.8E-156 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS09695 8dd002e6c5c9c3d8c35d5df921080815 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS09695 8dd002e6c5c9c3d8c35d5df921080815 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS09695 8dd002e6c5c9c3d8c35d5df921080815 477 Gene3D G3DSA:3.40.309.10 268 457 1.4E-67 T 29-03-2018 AL539_RS18560 a43cdba11afb109e81b53cb8892ac94c 230 Pfam PF00005 ABC transporter 30 176 1.9E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS18560 a43cdba11afb109e81b53cb8892ac94c 230 SMART SM00382 39 228 8.9E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS18560 a43cdba11afb109e81b53cb8892ac94c 230 Gene3D G3DSA:3.40.50.300 6 230 8.8E-65 T 29-03-2018 AL539_RS18560 a43cdba11afb109e81b53cb8892ac94c 230 SUPERFAMILY SSF52540 12 228 1.82E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18560 a43cdba11afb109e81b53cb8892ac94c 230 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 9.4E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 9.4E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 9.4E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 9.4E-32 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 SUPERFAMILY SSF52374 3 325 3.43E-101 T 29-03-2018 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 417 43.976 T 29-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 Pfam PF00579 tRNA synthetases class I (W and Y) 31 325 9.5E-81 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 Gene3D G3DSA:3.40.50.620 5 223 2.5E-67 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 SUPERFAMILY SSF55174 323 416 1.83E-13 T 29-03-2018 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 416 6.6E-124 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 Gene3D G3DSA:1.10.240.10 225 329 7.2E-32 T 29-03-2018 AL539_RS21035 c317b0d87dc7a5402a410bc895d841cd 419 Gene3D G3DSA:3.10.290.10 338 416 2.0E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 29-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 Gene3D G3DSA:1.20.120.220 92 268 2.7E-53 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.1E-45 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 Pfam PF00119 ATP synthase A chain 44 262 8.3E-58 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.186 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12175 90c7287bb2e2c17265b252bef2fb281e 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Gene3D G3DSA:1.10.8.60 359 576 1.4E-34 T 29-03-2018 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 15 879 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 348 6.4E-10 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 SUPERFAMILY SSF52540 175 510 1.55E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Gene3D G3DSA:3.40.50.300 581 797 6.9E-41 T 29-03-2018 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 SMART SM01086 797 887 6.3E-11 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 737 751 2.5E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.5E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 704 722 2.5E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 630 648 2.5E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 SUPERFAMILY SSF52540 575 876 5.19E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Gene3D G3DSA:1.10.8.60 798 890 1.2E-12 T 29-03-2018 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Pfam PF07724 AAA domain (Cdc48 subfamily) 626 790 1.1E-43 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Gene3D G3DSA:1.10.1780.10 2 163 2.1E-19 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 797 872 3.7E-13 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 SMART SM00382 213 358 3.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 SMART SM00382 626 785 8.6E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 660 678 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 Gene3D G3DSA:3.40.50.300 172 357 5.1E-20 T 29-03-2018 AL539_RS20035 7eefb2f2b60b8f08b525bd9e91ecea75 892 SUPERFAMILY SSF81923 18 125 1.8E-11 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS07710 cf51023bb0b1316d45d32188d41b9a82 150 SUPERFAMILY SSF54637 7 146 1.42E-49 T 29-03-2018 IPR029069 HotDog domain AL539_RS07710 cf51023bb0b1316d45d32188d41b9a82 150 Gene3D G3DSA:3.10.129.10 1 149 3.6E-54 T 29-03-2018 AL539_RS07710 cf51023bb0b1316d45d32188d41b9a82 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.701 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS07710 cf51023bb0b1316d45d32188d41b9a82 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.2E-60 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS07710 cf51023bb0b1316d45d32188d41b9a82 150 Pfam PF07977 FabA-like domain 17 141 6.9E-40 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 SMART SM00345 7 66 4.5E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 Gene3D G3DSA:1.10.10.10 1 68 7.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 Gene3D G3DSA:3.90.1150.10 372 469 9.3E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 Pfam PF00155 Aminotransferase class I and II 146 446 1.7E-35 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 Gene3D G3DSA:3.40.640.10 122 371 3.5E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 7.0E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 SUPERFAMILY SSF46785 3 68 2.36E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19695 90d4298b2aade8b8184dce495893332f 471 SUPERFAMILY SSF53383 94 468 8.87E-93 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS00840 872eef0b96b379450d904bcbbd72e263 551 SUPERFAMILY SSF53300 377 524 2.08E-16 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS00840 872eef0b96b379450d904bcbbd72e263 551 Pfam PF00092 von Willebrand factor type A domain 381 520 1.1E-6 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS00840 872eef0b96b379450d904bcbbd72e263 551 Gene3D G3DSA:3.40.50.410 350 548 4.0E-17 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS00840 872eef0b96b379450d904bcbbd72e263 551 SMART SM00327 376 549 1.7E-6 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 2.6E-148 T 29-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Pfam PF01807 CHC2 zinc finger 6 101 1.9E-41 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 SMART SM00493 266 337 3.6E-18 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 SMART SM00400 36 90 1.8E-37 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Gene3D G3DSA:1.20.50.20 375 424 6.4E-19 T 29-03-2018 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 SMART SM00766 458 583 1.9E-56 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Gene3D G3DSA:3.40.1360.10 248 374 4.7E-31 T 29-03-2018 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Gene3D G3DSA:1.10.860.10 442 588 2.2E-42 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Hamap MF_00974 DNA primase [dnaG]. 4 584 29.714 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Pfam PF10410 DnaB-helicase binding domain of primase 376 428 1.3E-9 T 29-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Gene3D G3DSA:3.90.580.10 1 103 1.2E-36 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 SUPERFAMILY SSF117023 455 586 1.7E-44 T 29-03-2018 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 PIRSF PIRSF002811 2 587 1.1E-145 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 7.0E-42 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Pfam PF08278 DNA primase DnaG DnaB-binding 459 582 7.2E-36 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Pfam PF13155 Toprim-like 270 357 7.9E-14 T 29-03-2018 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 SUPERFAMILY SSF57783 4 101 4.76E-38 T 29-03-2018 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 SUPERFAMILY SSF56731 123 434 9.59E-115 T 29-03-2018 AL539_RS14300 8cb69c971b3d80f2f35b4258ad1650fa 588 Gene3D G3DSA:3.90.980.10 116 247 1.3E-45 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AL539_RS20100 40c93a28a96c17d0bad3aeb3fe75c47e 258 PIRSF PIRSF029195 1 258 6.3E-167 T 29-03-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 AL539_RS20100 40c93a28a96c17d0bad3aeb3fe75c47e 258 Gene3D G3DSA:3.30.1340.10 1 85 1.7E-6 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS20100 40c93a28a96c17d0bad3aeb3fe75c47e 258 SUPERFAMILY SSF55594 9 88 1.02E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AL539_RS20100 40c93a28a96c17d0bad3aeb3fe75c47e 258 SUPERFAMILY SSF55804 128 249 5.23E-18 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS20100 40c93a28a96c17d0bad3aeb3fe75c47e 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 4.4E-21 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS20100 40c93a28a96c17d0bad3aeb3fe75c47e 258 Gene3D G3DSA:3.40.930.10 121 252 1.8E-16 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS14395 82311459b8609ca199c320157363a74b 947 SUPERFAMILY SSF81301 528 815 1.93E-87 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 6.1E-93 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 4.4E-97 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Gene3D G3DSA:1.20.120.330 815 947 4.6E-33 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 SUPERFAMILY SSF81593 818 946 7.85E-33 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Gene3D G3DSA:3.30.460.10 114 287 1.5E-57 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Gene3D G3DSA:3.30.460.10 641 814 1.5E-55 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.101 T 29-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AL539_RS14395 82311459b8609ca199c320157363a74b 947 SUPERFAMILY SSF81301 24 289 4.73E-87 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Gene3D G3DSA:1.10.4050.10 528 640 4.3E-22 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Gene3D G3DSA:1.10.4050.10 9 112 4.3E-11 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 SUPERFAMILY SSF81593 290 439 8.63E-42 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Gene3D G3DSA:1.20.120.330 288 443 4.4E-48 T 29-03-2018 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 1.9E-44 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL539_RS14395 82311459b8609ca199c320157363a74b 947 Pfam PF08335 GlnD PII-uridylyltransferase 846 913 7.5E-6 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 SUPERFAMILY SSF46689 135 185 2.78E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 Gene3D G3DSA:1.10.10.60 195 236 2.7E-14 T 29-03-2018 AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 SMART SM00342 152 235 1.3E-29 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 Pfam PF12833 Helix-turn-helix domain 158 235 1.0E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 204 219 5.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 219 235 5.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 Gene3D G3DSA:2.60.120.10 11 194 2.2E-23 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 SUPERFAMILY SSF51182 14 106 7.42E-9 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS04450 fa3e714af5393514c0e766621b48faaa 236 SUPERFAMILY SSF46689 189 235 3.05E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 SUPERFAMILY SSF55874 304 422 1.83E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 SUPERFAMILY SSF47384 210 291 5.89E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 Gene3D G3DSA:1.10.287.130 210 288 3.5E-12 T 29-03-2018 AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 422 9.7E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 SMART SM00387 336 426 9.6E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 Gene3D G3DSA:3.30.565.10 291 427 4.3E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 2.9E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06115 424fec1d2916681a8b4aafd9f466e76b 428 SMART SM00388 227 292 1.9E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS12800 d4bbf84d019cbe8178231f515f68ee7d 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 1.9E-206 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL539_RS12800 d4bbf84d019cbe8178231f515f68ee7d 463 SUPERFAMILY SSF102114 12 450 5.76E-145 T 29-03-2018 AL539_RS12800 d4bbf84d019cbe8178231f515f68ee7d 463 Pfam PF04055 Radical SAM superfamily 63 234 1.0E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS12800 d4bbf84d019cbe8178231f515f68ee7d 463 Gene3D G3DSA:3.20.20.70 40 359 1.5E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS12800 d4bbf84d019cbe8178231f515f68ee7d 463 Pfam PF06969 HemN C-terminal domain 369 437 1.4E-11 T 29-03-2018 IPR010723 HemN, C-terminal AL539_RS12800 d4bbf84d019cbe8178231f515f68ee7d 463 SMART SM00729 58 278 3.1E-54 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS12800 d4bbf84d019cbe8178231f515f68ee7d 463 PIRSF PIRSF000167 9 460 1.9E-174 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL539_RS04645 eeb102dfc936b53618e778a483d140ae 383 Pfam PF12698 ABC-2 family transporter protein 22 367 5.3E-40 T 29-03-2018 AL539_RS04645 eeb102dfc936b53618e778a483d140ae 383 Gene3D G3DSA:3.40.1710.10 38 199 2.7E-25 T 29-03-2018 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 4.1E-12 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 SUPERFAMILY SSF53187 322 406 4.37E-80 T 29-03-2018 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 SUPERFAMILY SSF53187 1 210 4.37E-80 T 29-03-2018 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 Gene3D G3DSA:3.40.630.10 1 409 4.6E-49 T 29-03-2018 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 5.2E-162 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 PIRSF PIRSF037215 1 408 1.6E-182 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 SUPERFAMILY SSF55031 209 320 6.98E-40 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 Pfam PF07687 Peptidase dimerisation domain 206 303 7.4E-10 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL539_RS20330 b1daff3a360fd397a32a9082d9ccd67d 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 57.398 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL539_RS11425 06dfdda08bfd858744f6e0a1a6c22e37 280 Gene3D G3DSA:1.20.1540.10 94 270 2.8E-34 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL539_RS11425 06dfdda08bfd858744f6e0a1a6c22e37 280 Pfam PF01694 Rhomboid family 134 271 6.5E-31 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL539_RS11425 06dfdda08bfd858744f6e0a1a6c22e37 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 7.6E-118 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AL539_RS11425 06dfdda08bfd858744f6e0a1a6c22e37 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 6.4E-34 T 29-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AL539_RS11425 06dfdda08bfd858744f6e0a1a6c22e37 280 SUPERFAMILY SSF144091 96 271 1.7E-40 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL539_RS11385 ef2230d61680c59d343e79e432a5147e 284 Gene3D G3DSA:3.40.50.150 31 213 4.3E-21 T 29-03-2018 AL539_RS11385 ef2230d61680c59d343e79e432a5147e 284 PIRSF PIRSF028177 17 284 1.2E-72 T 29-03-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 AL539_RS11385 ef2230d61680c59d343e79e432a5147e 284 SUPERFAMILY SSF53335 32 266 2.66E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS11385 ef2230d61680c59d343e79e432a5147e 284 Pfam PF04072 Leucine carboxyl methyltransferase 84 225 7.4E-8 T 29-03-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AL539_RS03215 25d337704a41e81896d53355a1362198 292 SUPERFAMILY SSF46785 4 84 6.12E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS03215 25d337704a41e81896d53355a1362198 292 Gene3D G3DSA:3.40.190.10 92 176 6.7E-14 T 29-03-2018 AL539_RS03215 25d337704a41e81896d53355a1362198 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS03215 25d337704a41e81896d53355a1362198 292 SUPERFAMILY SSF53850 89 291 9.05E-38 T 29-03-2018 AL539_RS03215 25d337704a41e81896d53355a1362198 292 Gene3D G3DSA:3.40.190.10 177 260 1.6E-17 T 29-03-2018 AL539_RS03215 25d337704a41e81896d53355a1362198 292 Pfam PF03466 LysR substrate binding domain 89 289 7.3E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS03215 25d337704a41e81896d53355a1362198 292 Gene3D G3DSA:1.10.10.10 3 84 2.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19635 ffff2842af5926b0b1ad843dad2948a5 497 Pfam PF00171 Aldehyde dehydrogenase family 17 477 4.3E-139 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS19635 ffff2842af5926b0b1ad843dad2948a5 497 Gene3D G3DSA:3.40.309.10 264 459 1.5E-58 T 29-03-2018 AL539_RS19635 ffff2842af5926b0b1ad843dad2948a5 497 Gene3D G3DSA:3.40.605.10 1 263 2.4E-87 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS19635 ffff2842af5926b0b1ad843dad2948a5 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 2.9E-242 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AL539_RS19635 ffff2842af5926b0b1ad843dad2948a5 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS19635 ffff2842af5926b0b1ad843dad2948a5 497 SUPERFAMILY SSF53720 2 483 4.32E-145 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS24975 2a9c35c58a81531e76715f8c18e22c1a 397 Pfam PF07690 Major Facilitator Superfamily 17 349 2.6E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS24975 2a9c35c58a81531e76715f8c18e22c1a 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 367 3.6E-60 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL539_RS24975 2a9c35c58a81531e76715f8c18e22c1a 397 SUPERFAMILY SSF103473 4 384 5.1E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS24975 2a9c35c58a81531e76715f8c18e22c1a 397 Gene3D G3DSA:1.20.1250.20 201 396 9.1E-16 T 29-03-2018 AL539_RS24975 2a9c35c58a81531e76715f8c18e22c1a 397 Gene3D G3DSA:1.20.1250.20 1 192 3.1E-27 T 29-03-2018 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 Gene3D G3DSA:3.30.930.10 1 203 4.5E-63 T 29-03-2018 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 5.0E-72 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 SUPERFAMILY SSF55681 2 204 2.73E-70 T 29-03-2018 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 29-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 PIRSF PIRSF016262 1 216 1.3E-62 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-25 T 29-03-2018 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.819 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL539_RS16065 0790ffd42438ba66d6a1a6a13abbbe1f 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 1.1E-7 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AL539_RS19350 dca05421115329948a740ba34175b4c8 151 SMART SM00851 25 118 5.5E-23 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS19350 dca05421115329948a740ba34175b4c8 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 36.233 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL539_RS19350 dca05421115329948a740ba34175b4c8 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 4.5E-65 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL539_RS19350 dca05421115329948a740ba34175b4c8 151 SUPERFAMILY SSF52335 2 150 1.98E-58 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS19350 dca05421115329948a740ba34175b4c8 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 29-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL539_RS19350 dca05421115329948a740ba34175b4c8 151 Pfam PF02142 MGS-like domain 25 118 2.6E-18 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS19350 dca05421115329948a740ba34175b4c8 151 Gene3D G3DSA:3.40.50.1380 1 151 1.1E-43 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS19350 dca05421115329948a740ba34175b4c8 151 PIRSF PIRSF006614 8 151 1.2E-64 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 29-03-2018 IPR000644 CBS domain AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF00571 CBS domain 75 132 2.5E-7 T 29-03-2018 IPR000644 CBS domain AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 SUPERFAMILY SSF54631 65 206 2.02E-33 T 29-03-2018 AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 SMART SM01091 211 289 2.4E-30 T 29-03-2018 IPR005170 Transporter-associated domain AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF03471 Transporter associated domain 212 287 3.3E-22 T 29-03-2018 IPR005170 Transporter-associated domain AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 SMART SM00116 147 195 0.028 T 29-03-2018 IPR000644 CBS domain AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 SMART SM00116 84 133 0.0058 T 29-03-2018 IPR000644 CBS domain AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 Gene3D G3DSA:3.10.580.10 54 202 2.8E-34 T 29-03-2018 AL539_RS16130 2f6a6af0a1373d69673dff17832626ee 299 Gene3D G3DSA:3.30.465.10 203 287 1.4E-25 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL539_RS03895 0b32a008157f0da1e98fe3bd3f34db05 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 36.007 T 29-03-2018 IPR009809 Cell division protein ZapC AL539_RS03895 0b32a008157f0da1e98fe3bd3f34db05 180 PIRSF PIRSF010252 1 178 2.5E-72 T 29-03-2018 IPR009809 Cell division protein ZapC AL539_RS03895 0b32a008157f0da1e98fe3bd3f34db05 180 Pfam PF07126 Cell-division protein ZapC 1 168 2.2E-66 T 29-03-2018 IPR009809 Cell division protein ZapC AL539_RS15355 5c25baa054e70ccb4efe6d22d6479386 372 SUPERFAMILY SSF56014 265 354 2.43E-11 T 29-03-2018 AL539_RS15355 5c25baa054e70ccb4efe6d22d6479386 372 Gene3D G3DSA:3.20.20.120 17 178 7.1E-20 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS15355 5c25baa054e70ccb4efe6d22d6479386 372 Pfam PF04551 GcpE protein 14 354 4.0E-132 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL539_RS15355 5c25baa054e70ccb4efe6d22d6479386 372 SUPERFAMILY SSF51717 15 207 5.73E-11 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS15355 5c25baa054e70ccb4efe6d22d6479386 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.139 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL539_RS15355 5c25baa054e70ccb4efe6d22d6479386 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 1.5E-126 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL539_RS15355 5c25baa054e70ccb4efe6d22d6479386 372 PIRSF PIRSF004640 1 364 2.1E-147 T 29-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL539_RS22595 c691bc2f3bf473f6c274061450b606be 261 PIRSF PIRSF028205 1 258 2.5E-115 T 29-03-2018 IPR011220 Uncharacterised conserved protein UCP028205 AL539_RS22595 c691bc2f3bf473f6c274061450b606be 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 254 4.4E-37 T 29-03-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL539_RS22595 c691bc2f3bf473f6c274061450b606be 261 Gene3D G3DSA:2.50.20.10 27 257 5.9E-33 T 29-03-2018 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 42 449 1.2E-88 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 1.6E-29 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 448 1.6E-29 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 1.6E-29 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 413 428 1.6E-29 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 69 1.6E-29 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 1.6E-29 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 1.6E-29 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 Gene3D G3DSA:2.40.50.100 10 109 0.026 T 29-03-2018 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 Gene3D G3DSA:1.20.1600.10 196 414 2.7E-9 T 29-03-2018 AL539_RS25165 c90c2c1708ae77a4c0514c281e3178d8 449 Pfam PF13437 HlyD family secretion protein 301 405 3.4E-14 T 29-03-2018 AL539_RS20485 0973c4ce716c20836f2a30c335095c6f 365 Pfam PF13407 Periplasmic binding protein domain 69 324 8.8E-14 T 29-03-2018 IPR025997 Periplasmic binding protein AL539_RS20485 0973c4ce716c20836f2a30c335095c6f 365 SUPERFAMILY SSF53822 27 364 9.9E-86 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS20485 0973c4ce716c20836f2a30c335095c6f 365 Gene3D G3DSA:3.40.50.2300 204 341 3.5E-21 T 29-03-2018 AL539_RS20485 0973c4ce716c20836f2a30c335095c6f 365 Gene3D G3DSA:3.40.50.2300 24 203 9.6E-25 T 29-03-2018 AL539_RS04185 2fa5bdd2319e224d55f46317337f7261 244 PIRSF PIRSF039085 1 244 5.3E-109 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL539_RS04185 2fa5bdd2319e224d55f46317337f7261 244 Gene3D G3DSA:3.40.50.300 1 243 6.7E-73 T 29-03-2018 AL539_RS04185 2fa5bdd2319e224d55f46317337f7261 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS04185 2fa5bdd2319e224d55f46317337f7261 244 Pfam PF00005 ABC transporter 21 169 4.8E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS04185 2fa5bdd2319e224d55f46317337f7261 244 SUPERFAMILY SSF52540 4 239 3.38E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS04185 2fa5bdd2319e224d55f46317337f7261 244 SMART SM00382 30 217 1.1E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23075 4a8fd142c9b76be9e8c1f605a8c64d8d 317 SUPERFAMILY SSF51261 32 267 6.28E-53 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS23075 4a8fd142c9b76be9e8c1f605a8c64d8d 317 Gene3D G3DSA:2.70.70.10 58 271 6.9E-40 T 29-03-2018 AL539_RS23075 4a8fd142c9b76be9e8c1f605a8c64d8d 317 Pfam PF01551 Peptidase family M23 169 264 1.4E-29 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS21270 91f93fb0c7bbc14f81ed27002352db13 293 SUPERFAMILY SSF103481 42 142 3.4E-14 T 29-03-2018 AL539_RS21270 91f93fb0c7bbc14f81ed27002352db13 293 SUPERFAMILY SSF103481 182 281 4.18E-10 T 29-03-2018 AL539_RS21270 91f93fb0c7bbc14f81ed27002352db13 293 Pfam PF00892 EamA-like transporter family 9 138 1.5E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS22925 f5402e0e9196e49915a49d0556218c29 185 Gene3D G3DSA:3.30.1020.10 151 181 9.0E-10 T 29-03-2018 AL539_RS22925 f5402e0e9196e49915a49d0556218c29 185 PIRSF PIRSF000239 1 185 5.9E-54 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS22925 f5402e0e9196e49915a49d0556218c29 185 SUPERFAMILY SSF52833 2 184 4.54E-56 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS22925 f5402e0e9196e49915a49d0556218c29 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 8.6E-105 T 29-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL539_RS22925 f5402e0e9196e49915a49d0556218c29 185 Gene3D G3DSA:3.40.30.10 2 150 3.0E-34 T 29-03-2018 AL539_RS22925 f5402e0e9196e49915a49d0556218c29 185 Pfam PF00578 AhpC/TSA family 4 131 3.1E-35 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS22925 f5402e0e9196e49915a49d0556218c29 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS24590 5d9eb1ff9d4470563f16a2f3bd86966a 253 SMART SM00382 31 225 1.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24590 5d9eb1ff9d4470563f16a2f3bd86966a 253 Pfam PF00005 ABC transporter 23 178 1.8E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24590 5d9eb1ff9d4470563f16a2f3bd86966a 253 Gene3D G3DSA:3.40.50.300 3 253 2.8E-53 T 29-03-2018 AL539_RS24590 5d9eb1ff9d4470563f16a2f3bd86966a 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS24590 5d9eb1ff9d4470563f16a2f3bd86966a 253 SUPERFAMILY SSF52540 3 250 6.97E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 Gene3D G3DSA:3.30.70.1430 555 650 6.4E-13 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 Gene3D G3DSA:3.30.70.1430 40 141 5.9E-25 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82714 182 263 1.31E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82693 553 650 2.72E-20 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82866 782 1008 2.35E-47 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82693 41 130 2.62E-23 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 Gene3D G3DSA:1.20.1640.10 279 502 8.1E-43 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 Gene3D G3DSA:1.20.1640.10 788 1008 7.6E-43 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82693 136 181 5.36E-22 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82693 267 323 5.36E-22 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.3E-276 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 8.7E-76 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82866 290 489 6.02E-47 T 29-03-2018 AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 SUPERFAMILY SSF82714 701 783 1.31E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 Gene3D G3DSA:3.30.2090.10 697 787 9.0E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS12425 ebb2d4cfdd2bb656dfd1d64c39339b15 1040 Gene3D G3DSA:3.30.2090.10 180 267 2.9E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 TIGRFAM TIGR00260 thrC: threonine synthase 52 390 8.2E-114 T 29-03-2018 IPR004450 Threonine synthase-like AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 Gene3D G3DSA:3.40.50.1100 99 194 2.1E-19 T 29-03-2018 AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 Gene3D G3DSA:3.40.50.1100 195 317 1.7E-42 T 29-03-2018 AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 Gene3D G3DSA:3.40.50.1100 318 394 8.3E-13 T 29-03-2018 AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 367 1.2E-23 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 Gene3D G3DSA:3.90.1380.10 1 79 4.4E-14 T 29-03-2018 IPR029144 Threonine synthase, N-terminal AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 SUPERFAMILY SSF53686 1 424 1.23E-131 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS14765 0b7d9e616bd12910e493bae3b99288f7 426 Pfam PF14821 Threonine synthase N terminus 8 78 3.4E-8 T 29-03-2018 IPR029144 Threonine synthase, N-terminal AL539_RS25510 5a0fa42b66a22a4b21531e65b7a2a61c 490 Gene3D G3DSA:3.20.20.450 241 489 1.4E-72 T 29-03-2018 IPR001633 EAL domain AL539_RS25510 5a0fa42b66a22a4b21531e65b7a2a61c 490 SMART SM00052 239 481 4.2E-73 T 29-03-2018 IPR001633 EAL domain AL539_RS25510 5a0fa42b66a22a4b21531e65b7a2a61c 490 SUPERFAMILY SSF141868 246 484 1.15E-71 T 29-03-2018 IPR001633 EAL domain AL539_RS25510 5a0fa42b66a22a4b21531e65b7a2a61c 490 Pfam PF12792 CSS motif domain associated with EAL 33 109 4.0E-5 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AL539_RS25510 5a0fa42b66a22a4b21531e65b7a2a61c 490 Pfam PF00563 EAL domain 246 476 4.2E-61 T 29-03-2018 IPR001633 EAL domain AL539_RS23430 ad47ce114525e029564c11a09e0fd3ba 431 SUPERFAMILY SSF53474 262 420 3.15E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23430 ad47ce114525e029564c11a09e0fd3ba 431 SUPERFAMILY SSF53474 41 169 3.15E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23430 ad47ce114525e029564c11a09e0fd3ba 431 Gene3D G3DSA:3.40.50.1820 4 422 8.0E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23430 ad47ce114525e029564c11a09e0fd3ba 431 Pfam PF00561 alpha/beta hydrolase fold 50 219 3.4E-21 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS23430 ad47ce114525e029564c11a09e0fd3ba 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 7.8E-8 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL539_RS23430 ad47ce114525e029564c11a09e0fd3ba 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 7.8E-8 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL539_RS23430 ad47ce114525e029564c11a09e0fd3ba 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 7.8E-8 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 Gene3D G3DSA:1.10.287.950 314 545 1.2E-51 T 29-03-2018 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 Pfam PF00672 HAMP domain 215 264 4.1E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 Gene3D G3DSA:1.20.1480.30 223 313 0.0063 T 29-03-2018 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 155 536 0.005 T 29-03-2018 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 Gene3D G3DSA:1.20.120.20 23 222 0.082 T 29-03-2018 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 SMART SM00304 214 268 3.9E-14 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 SMART SM00304 303 356 91.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 SMART SM00283 283 544 8.7E-73 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 SUPERFAMILY SSF58104 236 545 6.15E-76 T 29-03-2018 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 6.0E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 6.0E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 6.0E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 487 6.0E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS01260 7d580563aa952a92678c02cdd2acd7b1 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 510 5.9E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24145 245f7c7aa4bcfca9f06324347ae50cda 66 Gene3D G3DSA:3.90.220.20 5 46 1.2E-4 T 29-03-2018 AL539_RS24145 245f7c7aa4bcfca9f06324347ae50cda 66 SUPERFAMILY SSF116734 10 51 5.56E-5 T 29-03-2018 AL539_RS12520 11da1be2395321244f1e37016fd01b9a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.8E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12520 11da1be2395321244f1e37016fd01b9a 311 Gene3D G3DSA:1.10.10.10 3 90 4.1E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12520 11da1be2395321244f1e37016fd01b9a 311 Pfam PF03466 LysR substrate binding domain 98 255 1.9E-10 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS12520 11da1be2395321244f1e37016fd01b9a 311 Gene3D G3DSA:3.40.190.10 189 273 6.9E-4 T 29-03-2018 AL539_RS12520 11da1be2395321244f1e37016fd01b9a 311 Gene3D G3DSA:3.40.190.10 96 188 2.1E-6 T 29-03-2018 AL539_RS12520 11da1be2395321244f1e37016fd01b9a 311 SUPERFAMILY SSF53850 92 301 2.35E-18 T 29-03-2018 AL539_RS12520 11da1be2395321244f1e37016fd01b9a 311 SUPERFAMILY SSF46785 7 88 4.69E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20670 b29b1d956f85033a1fa3f06b09cff3f8 147 Pfam PF11911 Protein of unknown function (DUF3429) 5 145 1.0E-26 T 29-03-2018 IPR021836 Protein of unknown function DUF3429 AL539_RS03580 8037a875e1440689b98bd9babefddb77 350 SUPERFAMILY SSF81342 119 333 3.14E-46 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL539_RS03580 8037a875e1440689b98bd9babefddb77 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 4.6E-83 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AL539_RS03580 8037a875e1440689b98bd9babefddb77 350 Gene3D G3DSA:1.20.950.20 117 337 3.5E-46 T 29-03-2018 AL539_RS03580 8037a875e1440689b98bd9babefddb77 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 5.1E-25 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 29-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 Gene3D G3DSA:3.40.50.2020 150 307 7.8E-43 T 29-03-2018 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 Gene3D G3DSA:3.40.50.2020 1 149 8.6E-67 T 29-03-2018 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 SMART SM01400 4 121 2.0E-77 T 29-03-2018 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 3.3E-125 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 SUPERFAMILY SSF53271 69 306 2.91E-67 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.9E-31 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL539_RS16275 516c39be56632c74104053a9d6b7e106 314 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.807 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL539_RS14590 0c791a837aee6335650322e8f33234a8 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.568 T 29-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 AL539_RS14590 0c791a837aee6335650322e8f33234a8 260 Pfam PF08478 POTRA domain, FtsQ-type 54 123 3.9E-17 T 29-03-2018 IPR013685 POTRA domain, FtsQ-type AL539_RS14590 0c791a837aee6335650322e8f33234a8 260 Pfam PF03799 Cell division protein FtsQ 127 239 7.5E-25 T 29-03-2018 IPR005548 Cell division protein FtsQ/DivIB AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.952 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 PIRSF PIRSF001413 1 396 4.9E-168 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 SUPERFAMILY SSF53686 5 387 3.4E-141 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 Gene3D G3DSA:3.40.50.1100 196 396 8.0E-38 T 29-03-2018 AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.3E-48 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 Gene3D G3DSA:3.40.50.1100 8 195 2.1E-46 T 29-03-2018 AL539_RS05985 f605f2cf2511f2f79766c488f57ecfaa 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 3.0E-194 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 137 1.1E-5 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 43.525 T 29-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 SUPERFAMILY SSF101790 237 320 9.81E-20 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 SUPERFAMILY SSF103025 18 236 6.75E-55 T 29-03-2018 AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 PIRSF PIRSF006487 20 162 3.0E-5 T 29-03-2018 AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 PIRSF PIRSF006487 164 272 0.69 T 29-03-2018 AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 Gene3D G3DSA:3.30.70.1400 29 233 4.6E-23 T 29-03-2018 AL539_RS09090 46d29bab152bbddb5aea9ea911df06e7 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.3E-25 T 29-03-2018 IPR017703 YgfZ/GcvT conserved site AL539_RS07825 c5c701d79a537d864d68621f601f8a03 276 Gene3D G3DSA:3.40.47.10 114 276 3.8E-25 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07825 c5c701d79a537d864d68621f601f8a03 276 Gene3D G3DSA:3.40.47.10 1 113 1.9E-13 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07825 c5c701d79a537d864d68621f601f8a03 276 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 53 132 4.0E-15 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS07825 c5c701d79a537d864d68621f601f8a03 276 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 189 275 1.6E-17 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS07825 c5c701d79a537d864d68621f601f8a03 276 SUPERFAMILY SSF53901 1 275 2.16E-29 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS02540 8e5c9874d5c2d64fa2183e705552ee97 330 SMART SM00382 43 236 6.4E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02540 8e5c9874d5c2d64fa2183e705552ee97 330 Gene3D G3DSA:3.40.50.300 4 326 6.0E-80 T 29-03-2018 AL539_RS02540 8e5c9874d5c2d64fa2183e705552ee97 330 SUPERFAMILY SSF52540 10 258 3.67E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02540 8e5c9874d5c2d64fa2183e705552ee97 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 5.1E-24 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS02540 8e5c9874d5c2d64fa2183e705552ee97 330 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS02540 8e5c9874d5c2d64fa2183e705552ee97 330 Pfam PF00005 ABC transporter 35 186 9.9E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS02540 8e5c9874d5c2d64fa2183e705552ee97 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.9E-17 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Gene3D G3DSA:2.130.10.150 273 449 1.2E-30 T 29-03-2018 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Gene3D G3DSA:2.130.10.150 185 272 6.7E-14 T 29-03-2018 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 SUPERFAMILY SSF69304 174 448 2.48E-58 T 29-03-2018 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 SUPERFAMILY SSF52964 29 181 2.75E-40 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Hamap MF_00671 Protein TolB [tolB]. 3 446 35.78 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 1.5E-166 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 4.3E-14 T 29-03-2018 IPR011659 WD40-like Beta Propeller AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 1.4E-8 T 29-03-2018 IPR011659 WD40-like Beta Propeller AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 291 4.2E-8 T 29-03-2018 IPR011659 WD40-like Beta Propeller AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Gene3D G3DSA:3.40.50.10070 23 184 8.2E-41 T 29-03-2018 AL539_RS17825 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF04052 TolB amino-terminal domain 24 126 3.8E-35 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL539_RS09340 81349d496ffbb1bb661f9fe2f35b57c8 408 Gene3D G3DSA:3.90.1300.10 15 398 3.7E-81 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS09340 81349d496ffbb1bb661f9fe2f35b57c8 408 ProSitePatterns PS00571 Amidases signature. 107 138 - T 29-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL539_RS09340 81349d496ffbb1bb661f9fe2f35b57c8 408 SUPERFAMILY SSF75304 21 393 7.19E-81 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS09340 81349d496ffbb1bb661f9fe2f35b57c8 408 Pfam PF01425 Amidase 19 194 9.5E-55 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS09340 81349d496ffbb1bb661f9fe2f35b57c8 408 Pfam PF01425 Amidase 306 390 1.3E-6 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS09495 81349d496ffbb1bb661f9fe2f35b57c8 408 Gene3D G3DSA:3.90.1300.10 15 398 3.7E-81 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS09495 81349d496ffbb1bb661f9fe2f35b57c8 408 ProSitePatterns PS00571 Amidases signature. 107 138 - T 29-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AL539_RS09495 81349d496ffbb1bb661f9fe2f35b57c8 408 SUPERFAMILY SSF75304 21 393 7.19E-81 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS09495 81349d496ffbb1bb661f9fe2f35b57c8 408 Pfam PF01425 Amidase 19 194 9.5E-55 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS09495 81349d496ffbb1bb661f9fe2f35b57c8 408 Pfam PF01425 Amidase 306 390 1.3E-6 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 767 248.849 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Pfam PF10531 SLBB domain 296 345 4.3E-9 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 5.1E-34 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 SUPERFAMILY SSF142019 95 302 1.12E-59 T 29-03-2018 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Gene3D G3DSA:3.30.70.20 261 383 0.021 T 29-03-2018 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 SUPERFAMILY SSF46548 336 446 1.16E-20 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 2.1E-190 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Gene3D G3DSA:3.30.70.20 384 493 2.7E-15 T 29-03-2018 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Gene3D G3DSA:2.40.50.100 25 102 3.9E-4 T 29-03-2018 AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Pfam PF12838 4Fe-4S dicluster domain 378 430 1.8E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS06705 5f797060c69fb00c4aa54b13ddeca357 916 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 1.9E-47 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.0E-44 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 Gene3D G3DSA:3.40.366.10 1 184 7.3E-53 T 29-03-2018 AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.4E-125 T 29-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 Gene3D G3DSA:3.40.366.10 185 307 4.0E-31 T 29-03-2018 AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 Pfam PF00698 Acyl transferase domain 7 291 4.2E-38 T 29-03-2018 IPR014043 Acyl transferase AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 PIRSF PIRSF000446 1 307 1.0E-134 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 SUPERFAMILY SSF55048 128 197 6.15E-18 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 SUPERFAMILY SSF52151 190 305 2.88E-82 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS06430 42e6b8f8e61dfaab9358978e1004a1af 307 SUPERFAMILY SSF52151 4 122 2.88E-82 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS19220 74ca7f9e59fdf376630e653817c07ae5 182 SUPERFAMILY SSF55729 1 155 7.72E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS19220 74ca7f9e59fdf376630e653817c07ae5 182 Gene3D G3DSA:3.40.630.30 1 172 2.7E-26 T 29-03-2018 AL539_RS19220 74ca7f9e59fdf376630e653817c07ae5 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 4.1E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SMART SM00535 20 148 4.7E-55 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 1.5E-74 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Pfam PF14622 Ribonuclease-III-like 20 140 7.0E-33 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.8E-16 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.073 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Gene3D G3DSA:3.30.160.20 152 225 3.7E-22 T 29-03-2018 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SUPERFAMILY SSF69065 5 158 3.84E-50 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SUPERFAMILY SSF54768 108 222 4.71E-29 T 29-03-2018 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Gene3D G3DSA:1.10.1520.10 2 151 1.8E-44 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AL539_RS09035 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SMART SM00358 155 223 1.4E-22 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain AL539_RS20320 c0ef2b5157f51442fae3098cf9a1b410 375 Gene3D G3DSA:2.40.50.100 58 114 7.8E-19 T 29-03-2018 AL539_RS20320 c0ef2b5157f51442fae3098cf9a1b410 375 Gene3D G3DSA:1.10.287.470 115 161 1.4E-14 T 29-03-2018 AL539_RS20320 c0ef2b5157f51442fae3098cf9a1b410 375 Gene3D G3DSA:2.40.50.100 162 342 8.7E-6 T 29-03-2018 AL539_RS20320 c0ef2b5157f51442fae3098cf9a1b410 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 367 2.2E-83 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS20320 c0ef2b5157f51442fae3098cf9a1b410 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 283 4.6E-15 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS20320 c0ef2b5157f51442fae3098cf9a1b410 375 SUPERFAMILY SSF111369 49 290 1.7E-62 T 29-03-2018 AL539_RS08205 e604940741db2b03e1d1da418a8db119 305 Gene3D G3DSA:1.10.10.10 5 88 9.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08205 e604940741db2b03e1d1da418a8db119 305 SUPERFAMILY SSF46785 7 85 1.02E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08205 e604940741db2b03e1d1da418a8db119 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.2E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS08205 e604940741db2b03e1d1da418a8db119 305 Gene3D G3DSA:3.40.190.10 188 273 2.8E-12 T 29-03-2018 AL539_RS08205 e604940741db2b03e1d1da418a8db119 305 Pfam PF03466 LysR substrate binding domain 100 289 7.1E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS08205 e604940741db2b03e1d1da418a8db119 305 Gene3D G3DSA:3.40.190.10 98 187 1.0E-9 T 29-03-2018 AL539_RS08205 e604940741db2b03e1d1da418a8db119 305 SUPERFAMILY SSF53850 94 299 8.87E-37 T 29-03-2018 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SUPERFAMILY SSF47226 6 129 1.7E-30 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SUPERFAMILY SSF55874 419 602 7.86E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 357 416 5.3E-12 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Gene3D G3DSA:3.30.565.10 419 603 2.2E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Pfam PF01627 Hpt domain 8 100 3.7E-16 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Gene3D G3DSA:2.40.50.180 639 684 2.2E-9 T 29-03-2018 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 603 7.9E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SUPERFAMILY SSF47384 358 417 7.45E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SUPERFAMILY SSF50341 603 737 1.07E-30 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SMART SM01231 356 416 3.2E-17 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Gene3D G3DSA:2.30.30.40 685 737 6.3E-21 T 29-03-2018 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Gene3D G3DSA:2.30.30.40 604 638 0.0066 T 29-03-2018 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SMART SM00387 461 604 3.7E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Pfam PF01584 CheW-like domain 610 739 1.8E-23 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 558 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 582 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Gene3D G3DSA:1.10.287.560 356 417 2.2E-16 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SMART SM00260 596 737 3.1E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 SMART SM00073 6 103 2.2E-19 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS07305 b86d3e13433f3dc4f84f52255989d735 746 Gene3D G3DSA:1.20.120.160 2 143 7.7E-32 T 29-03-2018 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Gene3D G3DSA:2.40.50.100 246 314 1.6E-8 T 29-03-2018 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Pfam PF02817 e3 binding domain 323 357 3.3E-14 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Gene3D G3DSA:3.30.559.10 388 630 2.8E-80 T 29-03-2018 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 SUPERFAMILY SSF51230 1 94 6.02E-24 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 SUPERFAMILY SSF51230 104 196 2.36E-23 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 630 1.1E-207 T 29-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 SUPERFAMILY SSF51230 203 295 1.31E-23 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Gene3D G3DSA:3.90.1170.30 146 245 2.4E-22 T 29-03-2018 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Gene3D G3DSA:3.90.1170.30 44 145 1.0E-22 T 29-03-2018 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Gene3D G3DSA:3.90.1170.30 1 43 9.7E-9 T 29-03-2018 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 7.0E-80 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Gene3D G3DSA:4.10.320.10 315 379 7.6E-18 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Pfam PF00364 Biotin-requiring enzyme 204 274 2.3E-21 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Pfam PF00364 Biotin-requiring enzyme 105 175 6.4E-21 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 Pfam PF00364 Biotin-requiring enzyme 4 73 4.5E-21 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 SUPERFAMILY SSF52777 388 629 2.8E-81 T 29-03-2018 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 SUPERFAMILY SSF47005 317 361 1.24E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL539_RS08710 09a0c1e2161c805245bd229f88316e98 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL539_RS22890 ee076b21c15171d0489ef85a8be620d7 228 SUPERFAMILY SSF52317 32 222 1.37E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS22890 ee076b21c15171d0489ef85a8be620d7 228 Gene3D G3DSA:3.40.50.880 27 226 1.8E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS22890 ee076b21c15171d0489ef85a8be620d7 228 Pfam PF01965 DJ-1/PfpI family 32 202 1.2E-18 T 29-03-2018 IPR002818 DJ-1/PfpI AL539_RS21735 4496448a82471776403252fac3c8aa04 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.372 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 371 1.3E-58 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.542 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 Pfam PF01641 SelR domain 243 362 2.1E-46 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 SUPERFAMILY SSF51316 239 379 2.62E-59 T 29-03-2018 IPR011057 Mss4-like AL539_RS21735 4496448a82471776403252fac3c8aa04 380 SUPERFAMILY SSF55068 31 205 5.36E-70 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 3.2E-56 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 Gene3D G3DSA:2.170.150.20 229 379 4.0E-53 T 29-03-2018 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 42 192 6.9E-50 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS21735 4496448a82471776403252fac3c8aa04 380 Gene3D G3DSA:3.30.1060.10 25 209 2.0E-60 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS13105 15cdc70383dc6e8999d18c963c16df59 141 PIRSF PIRSF029598 3 135 2.7E-40 T 29-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AL539_RS13105 15cdc70383dc6e8999d18c963c16df59 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 9.1E-14 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.772 T 29-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 SUPERFAMILY SSF63380 148 253 3.7E-29 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 Gene3D G3DSA:1.10.490.10 1 157 5.0E-41 T 29-03-2018 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 Gene3D G3DSA:3.40.50.80 255 394 6.2E-25 T 29-03-2018 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 Gene3D G3DSA:2.40.30.10 158 254 4.1E-28 T 29-03-2018 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 Pfam PF00042 Globin 7 103 1.3E-14 T 29-03-2018 IPR000971 Globin GO:0020037 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 8.0E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 SUPERFAMILY SSF46458 1 142 8.65E-37 T 29-03-2018 IPR009050 Globin-like AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 2.5E-14 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.9E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.9E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.9E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.9E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 6.8E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 6.8E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 6.8E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 6.8E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10610 6f354e84c7015cced876a7942c2a109e 394 SUPERFAMILY SSF52343 256 393 1.06E-36 T 29-03-2018 AL539_RS26010 22ba1a4dc074d1f7935ac6b6e19a108e 301 Gene3D G3DSA:3.40.1010.10 51 176 1.8E-32 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS26010 22ba1a4dc074d1f7935ac6b6e19a108e 301 SUPERFAMILY SSF53790 49 288 2.49E-67 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS26010 22ba1a4dc074d1f7935ac6b6e19a108e 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 6.7E-85 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS26010 22ba1a4dc074d1f7935ac6b6e19a108e 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS26010 22ba1a4dc074d1f7935ac6b6e19a108e 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 261 1.1E-42 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS26010 22ba1a4dc074d1f7935ac6b6e19a108e 301 Gene3D G3DSA:3.30.950.10 177 295 5.0E-26 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 Gene3D G3DSA:3.40.190.10 171 276 1.1E-17 T 29-03-2018 AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 Gene3D G3DSA:3.40.190.10 88 170 5.1E-10 T 29-03-2018 AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 Gene3D G3DSA:1.10.10.10 6 87 2.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 SUPERFAMILY SSF46785 9 111 1.58E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 Pfam PF03466 LysR substrate binding domain 91 298 4.6E-21 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 SUPERFAMILY SSF53850 91 302 7.06E-23 T 29-03-2018 AL539_RS15430 28d6d7f22aae2f45a9ff8d75df400ee3 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 4.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 SUPERFAMILY SSF53597 155 366 2.11E-49 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 110 6.1E-20 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL539_RS15885 f5499448277da3fe150ea7941876a975 375 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 5.8E-53 T 29-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 1.5E-122 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 Gene3D G3DSA:3.40.430.10 136 367 2.1E-56 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 SUPERFAMILY SSF53927 14 156 9.92E-48 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 Pfam PF01872 RibD C-terminal domain 158 358 1.0E-43 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 PIRSF PIRSF006769 10 372 1.0E-117 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AL539_RS15885 f5499448277da3fe150ea7941876a975 375 Gene3D G3DSA:3.40.140.10 11 135 3.5E-33 T 29-03-2018 AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 Gene3D G3DSA:1.10.3210.10 28 202 4.1E-20 T 29-03-2018 AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 Gene3D G3DSA:1.10.3210.10 216 420 4.8E-39 T 29-03-2018 AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 Pfam PF01966 HD domain 37 150 3.0E-6 T 29-03-2018 IPR006674 HD domain AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 Pfam PF01966 HD domain 249 370 2.1E-19 T 29-03-2018 IPR006674 HD domain AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 TIGRFAM TIGR00277 HDIG: HDIG domain 249 339 1.5E-8 T 29-03-2018 IPR006675 HDIG domain AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 SUPERFAMILY SSF109604 240 400 4.96E-33 T 29-03-2018 AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 SMART SM00471 245 380 3.2E-11 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 SMART SM00471 31 160 0.99 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS03145 79ce1bab75b4bc7cbc067e1f05f94bd5 421 SUPERFAMILY SSF109604 28 194 2.48E-19 T 29-03-2018 AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 9.2E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 9.2E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 9.2E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 PIRSF PIRSF001467 5 181 5.4E-25 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 SUPERFAMILY SSF50891 18 180 7.45E-53 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 Gene3D G3DSA:2.40.100.10 15 181 2.7E-46 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS07990 b861f6a7366e62c9bbe62e3a3bbc0637 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 4.5E-43 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS14385 e537ffd965f80384447b244a4bce32c3 257 Pfam PF07885 Ion channel 131 210 1.8E-14 T 29-03-2018 IPR013099 Potassium channel domain AL539_RS14385 e537ffd965f80384447b244a4bce32c3 257 PRINTS PR00169 Potassium channel signature 154 176 6.0E-5 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS14385 e537ffd965f80384447b244a4bce32c3 257 PRINTS PR00169 Potassium channel signature 70 90 6.0E-5 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS14385 e537ffd965f80384447b244a4bce32c3 257 PRINTS PR00169 Potassium channel signature 183 209 6.0E-5 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS14385 e537ffd965f80384447b244a4bce32c3 257 SUPERFAMILY SSF81324 11 210 6.35E-45 T 29-03-2018 AL539_RS14385 e537ffd965f80384447b244a4bce32c3 257 Gene3D G3DSA:1.10.287.70 9 212 1.7E-25 T 29-03-2018 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 Gene3D G3DSA:1.20.1270.20 1 151 2.7E-35 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 Gene3D G3DSA:1.20.1270.20 153 235 2.4E-21 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 4.3E-163 T 29-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 PIRSF PIRSF000076 1 553 2.2E-244 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 SUPERFAMILY SSF56821 1 551 6.41E-196 T 29-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.248 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 Gene3D G3DSA:3.40.50.2030 238 378 9.1E-68 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.1E-225 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS01870 607e6eb7c6ff104583ab3ac907fc36ae 553 Gene3D G3DSA:3.40.50.2030 379 553 3.1E-61 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL539_RS20845 b167330fd6e94f8af3aad5513963c4f1 380 SUPERFAMILY SSF56935 33 372 1.83E-20 T 29-03-2018 AL539_RS20845 b167330fd6e94f8af3aad5513963c4f1 380 Gene3D G3DSA:2.40.160.10 11 372 4.5E-48 T 29-03-2018 AL539_RS15465 35a25d110f0a365267322b9b54899949 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15465 35a25d110f0a365267322b9b54899949 293 SUPERFAMILY SSF53850 92 292 2.9E-24 T 29-03-2018 AL539_RS15465 35a25d110f0a365267322b9b54899949 293 Gene3D G3DSA:1.10.10.10 6 90 4.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15465 35a25d110f0a365267322b9b54899949 293 SUPERFAMILY SSF46785 4 116 6.98E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15465 35a25d110f0a365267322b9b54899949 293 Gene3D G3DSA:3.40.190.10 179 263 3.8E-7 T 29-03-2018 AL539_RS15465 35a25d110f0a365267322b9b54899949 293 Pfam PF03466 LysR substrate binding domain 94 292 6.0E-19 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS15465 35a25d110f0a365267322b9b54899949 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15465 35a25d110f0a365267322b9b54899949 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15465 35a25d110f0a365267322b9b54899949 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15465 35a25d110f0a365267322b9b54899949 293 Gene3D G3DSA:3.40.190.10 98 178 1.3E-7 T 29-03-2018 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 SUPERFAMILY SSF53182 1 202 5.62E-71 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 PIRSF PIRSF015592 1 210 4.4E-81 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 Gene3D G3DSA:3.40.630.20 1 212 3.8E-60 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.8E-45 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.8E-45 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.8E-45 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 1.8E-45 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.8E-45 T 29-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 29-03-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.678 T 29-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 210 9.8E-76 T 29-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 Pfam PF01470 Pyroglutamyl peptidase 2 198 1.1E-76 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL539_RS25475 48aeb68b875f40b46f8f4af5056c216f 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 29-03-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site AL539_RS12105 4dc5401b5151bdfc9a54434463072f12 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 3.3E-269 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS12105 4dc5401b5151bdfc9a54434463072f12 613 SUPERFAMILY SSF143975 3 420 5.62E-138 T 29-03-2018 AL539_RS12105 4dc5401b5151bdfc9a54434463072f12 613 SUPERFAMILY SSF52016 421 608 6.36E-62 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS12105 4dc5401b5151bdfc9a54434463072f12 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.461 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS12105 4dc5401b5151bdfc9a54434463072f12 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS12105 4dc5401b5151bdfc9a54434463072f12 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS12105 4dc5401b5151bdfc9a54434463072f12 613 Pfam PF00920 Dehydratase family 34 604 3.2E-223 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS05740 2b6ec07ee34a6305e250a74bba8e3eb5 186 SUPERFAMILY SSF55166 72 186 2.15E-33 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL539_RS05740 2b6ec07ee34a6305e250a74bba8e3eb5 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 39 186 6.9E-67 T 29-03-2018 IPR010275 Protein of unknown function DUF882 AL539_RS05740 2b6ec07ee34a6305e250a74bba8e3eb5 186 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 31 3.3E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS05740 2b6ec07ee34a6305e250a74bba8e3eb5 186 Gene3D G3DSA:3.30.1380.10 48 186 9.4E-25 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 Gene3D G3DSA:1.20.200.10 134 412 5.4E-72 T 29-03-2018 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.0E-6 T 29-03-2018 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.0E-6 T 29-03-2018 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.0E-6 T 29-03-2018 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 Gene3D G3DSA:1.10.275.10 3 133 4.5E-52 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 6.1E-32 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 6.1E-32 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 6.1E-32 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 6.1E-32 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 Pfam PF10415 Fumarase C C-terminus 403 455 1.8E-18 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.437 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 SUPERFAMILY SSF48557 5 455 4.24E-135 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 Pfam PF00206 Lyase 13 337 6.2E-92 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AL539_RS10965 0270a5ec8e7b15ab1209cd51c28b0cb5 461 Gene3D G3DSA:1.10.40.30 413 456 9.4E-19 T 29-03-2018 AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 SUPERFAMILY SSF55658 1 57 1.59E-18 T 29-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 Gene3D G3DSA:3.40.5.10 1 49 4.1E-21 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.3E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.887 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 7.7E-55 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 SUPERFAMILY SSF55653 60 148 5.36E-26 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 Gene3D G3DSA:3.10.430.100 63 148 3.7E-26 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AL539_RS10240 21821a8cf26c9f3374aff1a17183768e 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.6E-20 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS18405 b0f35aa96c4a5617d22b9e27f1b6295f 374 Pfam PF13358 DDE superfamily endonuclease 182 332 1.5E-27 T 29-03-2018 AL539_RS18405 b0f35aa96c4a5617d22b9e27f1b6295f 374 Gene3D G3DSA:3.30.420.10 209 367 1.8E-10 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS18405 b0f35aa96c4a5617d22b9e27f1b6295f 374 Pfam PF13565 Homeodomain-like domain 60 138 3.3E-13 T 29-03-2018 AL539_RS18405 b0f35aa96c4a5617d22b9e27f1b6295f 374 Gene3D G3DSA:1.10.10.60 27 87 5.7E-6 T 29-03-2018 AL539_RS18405 b0f35aa96c4a5617d22b9e27f1b6295f 374 SUPERFAMILY SSF46689 29 141 1.13E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS00455 b0f35aa96c4a5617d22b9e27f1b6295f 374 Pfam PF13358 DDE superfamily endonuclease 182 332 1.5E-27 T 29-03-2018 AL539_RS00455 b0f35aa96c4a5617d22b9e27f1b6295f 374 Gene3D G3DSA:3.30.420.10 209 367 1.8E-10 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS00455 b0f35aa96c4a5617d22b9e27f1b6295f 374 Pfam PF13565 Homeodomain-like domain 60 138 3.3E-13 T 29-03-2018 AL539_RS00455 b0f35aa96c4a5617d22b9e27f1b6295f 374 Gene3D G3DSA:1.10.10.60 27 87 5.7E-6 T 29-03-2018 AL539_RS00455 b0f35aa96c4a5617d22b9e27f1b6295f 374 SUPERFAMILY SSF46689 29 141 1.13E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS03305 ead30d14b82bb78c78913ee451d658eb 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 2.3E-18 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS03305 ead30d14b82bb78c78913ee451d658eb 171 SUPERFAMILY SSF56925 17 170 6.28E-28 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS03305 ead30d14b82bb78c78913ee451d658eb 171 Gene3D G3DSA:2.40.160.20 5 171 1.5E-18 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 SUPERFAMILY SSF52343 468 623 6.68E-51 T 29-03-2018 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.9E-29 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 623 2.5E-256 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 Gene3D G3DSA:2.40.30.10 246 462 1.9E-50 T 29-03-2018 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 SUPERFAMILY SSF63380 252 469 1.58E-64 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00369 Flavodoxin signature 168 178 2.6E-9 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00369 Flavodoxin signature 88 101 2.6E-9 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00369 Flavodoxin signature 192 211 2.6E-9 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PRINTS PR00369 Flavodoxin signature 136 147 2.6E-9 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 SUPERFAMILY SSF52218 86 233 1.43E-45 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 Gene3D G3DSA:3.40.50.360 61 245 6.5E-40 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 Gene3D G3DSA:3.40.50.80 466 622 3.2E-38 T 29-03-2018 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 7.4E-19 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 49.01 T 29-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 PIRSF PIRSF000207 20 623 3.2E-277 T 29-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 Pfam PF00667 FAD binding domain 254 448 1.3E-30 T 29-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 AL539_RS10180 b8743560baeb25681883d740bb6f10d1 623 Pfam PF00258 Flavodoxin 89 213 4.0E-28 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL539_RS03170 89492696a4f8002c7783a95aeec30f46 254 SMART SM00382 26 214 2.0E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03170 89492696a4f8002c7783a95aeec30f46 254 SUPERFAMILY SSF52540 2 233 3.7E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03170 89492696a4f8002c7783a95aeec30f46 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03170 89492696a4f8002c7783a95aeec30f46 254 Gene3D G3DSA:3.40.50.300 1 240 5.1E-55 T 29-03-2018 AL539_RS03170 89492696a4f8002c7783a95aeec30f46 254 Pfam PF00005 ABC transporter 17 165 9.2E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24355 bd84e2c467fae92a13354450f3e065b4 269 Gene3D G3DSA:3.40.50.300 3 268 6.3E-8 T 29-03-2018 AL539_RS24355 bd84e2c467fae92a13354450f3e065b4 269 SUPERFAMILY SSF52540 11 115 1.43E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24355 bd84e2c467fae92a13354450f3e065b4 269 SUPERFAMILY SSF52540 149 229 1.43E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24355 bd84e2c467fae92a13354450f3e065b4 269 Pfam PF10364 Putative capsular polysaccharide synthesis protein 120 255 3.6E-48 T 29-03-2018 IPR018831 Uncharacterised protein family NKWYS AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 SUPERFAMILY SSF51064 143 198 6.28E-20 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 177 196 4.1E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 67 83 4.1E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 95 110 4.1E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 150 165 4.1E-29 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 Gene3D G3DSA:3.90.20.20 1 141 2.2E-26 T 29-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.843 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 Gene3D G3DSA:2.30.22.10 142 198 5.0E-23 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 SUPERFAMILY SSF58014 44 142 5.49E-30 T 29-03-2018 AL539_RS15750 f4165ee01922a7e61adf7103c522488b 198 Pfam PF01025 GrpE 40 198 5.5E-56 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL539_RS22650 aa9d480d89ef72bb24bef9f99fda6953 282 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS22650 aa9d480d89ef72bb24bef9f99fda6953 282 SMART SM00382 44 250 1.4E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS22650 aa9d480d89ef72bb24bef9f99fda6953 282 SUPERFAMILY SSF52540 15 263 1.21E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22650 aa9d480d89ef72bb24bef9f99fda6953 282 Gene3D G3DSA:3.40.50.300 12 280 7.8E-74 T 29-03-2018 AL539_RS22650 aa9d480d89ef72bb24bef9f99fda6953 282 Pfam PF00005 ABC transporter 36 191 1.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.28 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 SUPERFAMILY SSF52540 72 123 1.05E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 SUPERFAMILY SSF52540 150 380 1.05E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 Pfam PF00271 Helicase conserved C-terminal domain 500 589 3.6E-8 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 Gene3D G3DSA:3.40.50.300 392 648 1.9E-25 T 29-03-2018 AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 SUPERFAMILY SSF52540 461 632 4.49E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 SMART SM00490 493 590 3.1E-12 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 Pfam PF00270 DEAD/DEAH box helicase 220 365 1.0E-14 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 SMART SM00487 197 396 1.0E-16 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 Gene3D G3DSA:3.40.50.300 123 391 1.2E-27 T 29-03-2018 AL539_RS13505 72ae8bbf45e601a9f4206dd804409057 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 1.2E-191 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 Gene3D G3DSA:3.40.50.880 1 194 5.5E-57 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 SUPERFAMILY SSF52317 1 191 7.89E-53 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 2.2E-85 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 2.1E-53 T 29-03-2018 IPR017926 Glutamine amidotransferase AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 29-03-2018 AL539_RS10540 2530cb671be77799721b7fcee860a44d 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 29-03-2018 AL539_RS23455 5402b9b33ee1b47837506fe70be167cd 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 6.8E-18 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL539_RS23455 5402b9b33ee1b47837506fe70be167cd 96 SUPERFAMILY SSF54909 1 80 9.73E-26 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS23455 5402b9b33ee1b47837506fe70be167cd 96 Gene3D G3DSA:3.30.70.100 1 90 1.3E-20 T 29-03-2018 AL539_RS21300 8db6ac6e9ac8e8b4aa8fb22b91ba8e61 217 Pfam PF00857 Isochorismatase family 10 208 9.1E-33 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL539_RS21300 8db6ac6e9ac8e8b4aa8fb22b91ba8e61 217 SUPERFAMILY SSF52499 4 212 1.24E-26 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL539_RS21300 8db6ac6e9ac8e8b4aa8fb22b91ba8e61 217 Gene3D G3DSA:3.40.50.850 5 214 2.8E-28 T 29-03-2018 AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 Gene3D G3DSA:3.40.50.620 322 476 2.3E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 4.6E-127 T 29-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 Pfam PF01467 Cytidylyltransferase-like 345 468 3.1E-14 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 SUPERFAMILY SSF53613 12 302 1.37E-60 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 Gene3D G3DSA:3.40.1190.20 6 310 4.0E-58 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 7.4E-48 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 SUPERFAMILY SSF52374 340 471 3.94E-23 T 29-03-2018 AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.4E-61 T 29-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.979 T 29-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AL539_RS14400 a227c75e2c340b8655a4df67ac1f89bd 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 Pfam PF00675 Insulinase (Peptidase family M16) 47 166 9.1E-26 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 Gene3D G3DSA:3.30.830.10 487 720 6.8E-24 T 29-03-2018 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 Gene3D G3DSA:3.30.830.10 18 247 3.9E-52 T 29-03-2018 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 Gene3D G3DSA:3.30.830.10 730 916 2.8E-16 T 29-03-2018 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 Gene3D G3DSA:3.30.830.10 254 467 2.2E-13 T 29-03-2018 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 Pfam PF05193 Peptidase M16 inactive domain 201 374 2.5E-13 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 Pfam PF05193 Peptidase M16 inactive domain 669 847 8.8E-10 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 SUPERFAMILY SSF63411 25 239 3.14E-45 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 SUPERFAMILY SSF63411 495 716 6.46E-27 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS23065 09130ef1d900972b6f49cae24d50466f 916 SUPERFAMILY SSF63411 734 911 3.49E-14 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS22140 0ca2cc31c24ac4fe2a304541b43e9224 251 Pfam PF00005 ABC transporter 26 166 3.1E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS22140 0ca2cc31c24ac4fe2a304541b43e9224 251 SMART SM00382 34 213 1.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS22140 0ca2cc31c24ac4fe2a304541b43e9224 251 Gene3D G3DSA:3.40.50.300 7 247 2.1E-54 T 29-03-2018 AL539_RS22140 0ca2cc31c24ac4fe2a304541b43e9224 251 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS22140 0ca2cc31c24ac4fe2a304541b43e9224 251 SUPERFAMILY SSF52540 10 212 1.26E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02110 641c161b8d4663e55e02bd1eb8ecb8b1 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 396 8.9E-58 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS02110 641c161b8d4663e55e02bd1eb8ecb8b1 443 SUPERFAMILY SSF53686 96 438 3.43E-53 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS02110 641c161b8d4663e55e02bd1eb8ecb8b1 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 264.237 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AL539_RS02110 641c161b8d4663e55e02bd1eb8ecb8b1 443 Gene3D G3DSA:3.40.50.1100 77 251 5.4E-26 T 29-03-2018 AL539_RS02110 641c161b8d4663e55e02bd1eb8ecb8b1 443 Gene3D G3DSA:3.40.50.1100 252 441 1.5E-26 T 29-03-2018 AL539_RS02110 641c161b8d4663e55e02bd1eb8ecb8b1 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL539_RS02110 641c161b8d4663e55e02bd1eb8ecb8b1 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 7.4E-220 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AL539_RS13185 b3fd9d8de8ff7674ed99f6a7f3b29942 326 SUPERFAMILY SSF53756 11 305 9.87E-37 T 29-03-2018 AL539_RS13185 b3fd9d8de8ff7674ed99f6a7f3b29942 326 Pfam PF00534 Glycosyl transferases group 1 134 282 2.2E-11 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS13185 b3fd9d8de8ff7674ed99f6a7f3b29942 326 Gene3D G3DSA:3.40.50.2000 55 312 1.2E-18 T 29-03-2018 AL539_RS19690 bafe6ef65d52b04ccbb16f53d2e574f2 182 SMART SM01266 4 56 3.8E-7 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL539_RS19690 bafe6ef65d52b04ccbb16f53d2e574f2 182 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 127 162 1.2E-10 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS19690 bafe6ef65d52b04ccbb16f53d2e574f2 182 SUPERFAMILY SSF51161 3 180 2.22E-50 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS19690 bafe6ef65d52b04ccbb16f53d2e574f2 182 Pfam PF12464 Maltose acetyltransferase 6 50 3.3E-8 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL539_RS19690 bafe6ef65d52b04ccbb16f53d2e574f2 182 Gene3D G3DSA:2.160.10.10 1 182 2.5E-50 T 29-03-2018 AL539_RS19690 bafe6ef65d52b04ccbb16f53d2e574f2 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 2.7E-91 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 SUPERFAMILY SSF55120 92 309 1.22E-63 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 SMART SM00363 20 77 7.0E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 Gene3D G3DSA:3.10.290.10 5 77 5.6E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 SUPERFAMILY SSF55174 19 71 4.27E-9 T 29-03-2018 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 Gene3D G3DSA:3.30.2350.10 93 314 8.1E-66 T 29-03-2018 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 Pfam PF01479 S4 domain 20 66 2.9E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS06460 38400027f4c602f539351ebe83ac92dc 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 3.8E-31 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS16480 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL539_RS16480 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.6E-30 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS16480 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-41 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS16480 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS16480 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS16480 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.0E-118 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AL539_RS16480 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 29-03-2018 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Pfam PF01751 Toprim domain 3 127 3.5E-16 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 684 723 1.5E-7 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 636 669 0.007 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Gene3D G3DSA:3.30.65.10 622 672 1.9E-6 T 29-03-2018 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Gene3D G3DSA:3.30.65.10 673 734 1.5E-12 T 29-03-2018 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 663 1.1E-209 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Gene3D G3DSA:2.70.20.10 358 479 5.5E-23 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 SMART SM00436 123 218 1.6E-24 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 SUPERFAMILY SSF57783 683 726 2.55E-5 T 29-03-2018 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 SUPERFAMILY SSF56712 1 611 8.37E-174 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 4.6E-20 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 4.6E-20 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 4.6E-20 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 188 206 4.6E-20 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 4.6E-20 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Gene3D G3DSA:3.40.50.140 1 151 1.9E-37 T 29-03-2018 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Gene3D G3DSA:1.10.460.10 152 357 1.6E-34 T 29-03-2018 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 SMART SM00493 1 123 5.2E-19 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Gene3D G3DSA:1.10.460.10 480 618 1.6E-19 T 29-03-2018 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 SMART SM00437 271 561 9.9E-59 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL539_RS00130 95c95238df01d5321682ef4b2528cec7 735 Pfam PF01131 DNA topoisomerase 151 595 2.6E-111 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 SUPERFAMILY SSF51735 401 529 1.22E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 2.2E-67 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 7.3E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 7.3E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 7.3E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 7.3E-7 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.88 T 29-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 2.9E-81 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 Gene3D G3DSA:1.20.91.10 227 310 7.2E-12 T 29-03-2018 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 Pfam PF02254 TrkA-N domain 402 511 4.9E-22 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS10480 2eb624bc146daa3af0503aa833358853 598 Gene3D G3DSA:3.40.50.720 396 559 1.9E-18 T 29-03-2018 AL539_RS11370 99be647cf90aad10028e6eeb7d1a9857 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.7E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS11370 99be647cf90aad10028e6eeb7d1a9857 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS11370 99be647cf90aad10028e6eeb7d1a9857 213 Gene3D G3DSA:1.10.357.10 1 208 2.2E-25 T 29-03-2018 AL539_RS11370 99be647cf90aad10028e6eeb7d1a9857 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 SUPERFAMILY SSF46689 352 438 5.38E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 Pfam PF00158 Sigma-54 interaction domain 146 305 5.8E-37 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 Gene3D G3DSA:1.10.10.60 386 443 1.6E-13 T 29-03-2018 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 Gene3D G3DSA:1.10.8.60 312 385 6.1E-22 T 29-03-2018 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 SUPERFAMILY SSF52172 27 190 2.19E-7 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 SMART SM00382 166 306 0.0018 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 Gene3D G3DSA:3.40.50.300 141 311 2.2E-17 T 29-03-2018 AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS14860 bcb41a9a8360346c2151e5fc3d30c24e 444 SUPERFAMILY SSF52540 146 380 6.66E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 2.1E-17 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 Pfam PF00501 AMP-binding enzyme 29 461 1.8E-108 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 Gene3D G3DSA:3.40.50.980 20 216 1.3E-41 T 29-03-2018 AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 SUPERFAMILY SSF56801 13 553 9.16E-151 T 29-03-2018 AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 Gene3D G3DSA:2.30.38.10 372 454 1.3E-29 T 29-03-2018 AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 Gene3D G3DSA:3.30.300.30 455 560 4.1E-25 T 29-03-2018 AL539_RS16900 7b62a0df174d86b04408df63cd3178d6 563 Gene3D G3DSA:3.40.50.980 217 371 2.2E-39 T 29-03-2018 AL539_RS09870 aa6a5c75d02be2ddbb8a29b3277868e0 129 Gene3D G3DSA:3.30.1330.40 1 129 4.0E-46 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL539_RS09870 aa6a5c75d02be2ddbb8a29b3277868e0 129 SUPERFAMILY SSF55298 2 128 7.38E-44 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL539_RS09870 aa6a5c75d02be2ddbb8a29b3277868e0 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 4.4E-53 T 29-03-2018 IPR006056 RidA family AL539_RS09870 aa6a5c75d02be2ddbb8a29b3277868e0 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.3E-44 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AL539_RS09870 aa6a5c75d02be2ddbb8a29b3277868e0 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 29-03-2018 IPR019897 RidA, conserved site AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 Gene3D G3DSA:1.10.10.10 124 229 1.7E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 SUPERFAMILY SSF52172 3 184 4.98E-43 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 Gene3D G3DSA:3.40.50.2300 1 123 8.9E-37 T 29-03-2018 AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 SMART SM00448 3 116 2.6E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 SMART SM00862 150 225 1.8E-27 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.2E-113 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS15165 7189d3537d97cc926d4146e329efa847 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 5.7E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.3E-101 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 Gene3D G3DSA:3.10.310.10 1 126 1.1E-48 T 29-03-2018 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 Gene3D G3DSA:3.10.310.10 127 263 4.0E-51 T 29-03-2018 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 SUPERFAMILY SSF54506 2 274 1.26E-53 T 29-03-2018 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 29-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 Pfam PF01678 Diaminopimelate epimerase 5 125 5.8E-34 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 Pfam PF01678 Diaminopimelate epimerase 154 268 5.0E-31 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL539_RS11580 a6ded8c71c6af2d4306ae123b9c01cdb 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.59 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Gene3D G3DSA:3.40.50.740 101 267 5.8E-38 T 29-03-2018 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 4.2E-26 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Gene3D G3DSA:3.40.50.740 303 667 1.4E-63 T 29-03-2018 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 SUPERFAMILY SSF50692 689 828 4.14E-41 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Gene3D G3DSA:2.40.40.20 668 828 1.2E-33 T 29-03-2018 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Hamap MF_01630 Nitrate reductase [napA]. 1 828 28.845 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 SMART SM00926 41 95 1.9E-13 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 SUPERFAMILY SSF53706 38 644 3.27E-201 T 29-03-2018 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Gene3D G3DSA:2.20.25.90 34 100 6.6E-14 T 29-03-2018 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 4.2E-89 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS20365 0f8e676e7cb61ed19c603c3e1293a54c 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 Gene3D G3DSA:1.10.10.10 129 220 3.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 SUPERFAMILY SSF52172 2 129 1.85E-38 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 214 3.7E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 Gene3D G3DSA:3.40.50.2300 1 128 1.1E-34 T 29-03-2018 AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 SMART SM00448 2 112 1.7E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 Pfam PF00072 Response regulator receiver domain 4 112 2.1E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 SUPERFAMILY SSF46894 140 215 7.09E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS22045 a30f46975a71af409f1da264c1eae1c5 221 SMART SM00862 139 215 5.4E-14 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS03360 77e2de6878f1b4567d26f157b08f908e 394 SUPERFAMILY SSF53756 7 371 1.93E-67 T 29-03-2018 AL539_RS03360 77e2de6878f1b4567d26f157b08f908e 394 Gene3D G3DSA:3.40.50.2000 182 353 6.3E-40 T 29-03-2018 AL539_RS03360 77e2de6878f1b4567d26f157b08f908e 394 Pfam PF00534 Glycosyl transferases group 1 183 347 4.5E-32 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS03360 77e2de6878f1b4567d26f157b08f908e 394 Gene3D G3DSA:3.40.50.2000 1 181 9.8E-13 T 29-03-2018 AL539_RS03360 77e2de6878f1b4567d26f157b08f908e 394 Pfam PF13439 Glycosyltransferase Family 4 18 174 5.3E-15 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL539_RS08315 0c832f7e5f4bf185dc3e24bee644cfbd 65 Pfam PF17320 Family of unknown function (DUF5363) 1 44 6.9E-11 T 29-03-2018 IPR035292 Protein of unknown function DUF5363 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 125 208 1.3E-36 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 Gene3D G3DSA:3.40.50.2300 123 220 4.7E-39 T 29-03-2018 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 Gene3D G3DSA:3.40.50.2300 2 99 9.2E-27 T 29-03-2018 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 231 568 4.9E-143 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 SUPERFAMILY SSF52794 123 224 2.27E-37 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 Pfam PF02378 Phosphotransferase system, EIIC 249 512 3.3E-17 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 5.1E-13 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 126 213 3.7E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS18845 16a20bb39ac8fc7f25264ba084cfd37f 579 SUPERFAMILY SSF52794 2 102 5.93E-29 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Gene3D G3DSA:1.25.40.10 653 755 1.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 SUPERFAMILY SSF48452 583 705 7.97E-21 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Pfam PF13432 Tetratricopeptide repeat 662 704 3.0E-4 T 29-03-2018 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 SMART SM00028 624 657 3.6 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 SMART SM00028 590 623 8.6E-5 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 SMART SM00028 658 691 160.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 SUPERFAMILY SSF48695 109 581 2.1E-76 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 SUPERFAMILY SSF48695 42 64 2.1E-76 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Pfam PF13435 Cytochrome c554 and c-prime 47 74 0.014 T 29-03-2018 IPR023155 Cytochrome c-552/4 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Pfam PF13435 Cytochrome c554 and c-prime 180 218 7.5E-4 T 29-03-2018 IPR023155 Cytochrome c-552/4 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Gene3D G3DSA:1.10.1130.10 24 376 9.3E-51 T 29-03-2018 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Gene3D G3DSA:1.25.40.10 571 652 1.2E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Pfam PF13414 TPR repeat 598 635 2.5E-7 T 29-03-2018 AL539_RS02990 4b5ddea326dc080f99c0f78439fc1308 776 Gene3D G3DSA:1.25.10.10 377 570 4.4E-23 T 29-03-2018 IPR011989 Armadillo-like helical AL539_RS04430 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 7.8E-71 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 7.8E-71 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 7.8E-71 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 7.8E-71 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 7.8E-71 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 7.8E-71 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 Pfam PF00813 FliP family 14 211 2.3E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS04430 92aec7af3383600929b50355a563740c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 8.3E-92 T 29-03-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AL539_RS15045 11dcfcbf31ce7f542ea1a60c572097fa 182 Gene3D G3DSA:3.90.950.10 8 177 1.2E-62 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS15045 11dcfcbf31ce7f542ea1a60c572097fa 182 Pfam PF01931 Protein of unknown function DUF84 14 172 1.4E-58 T 29-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AL539_RS15045 11dcfcbf31ce7f542ea1a60c572097fa 182 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 13 177 2.4E-47 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase AL539_RS15045 11dcfcbf31ce7f542ea1a60c572097fa 182 SUPERFAMILY SSF52972 9 178 2.66E-60 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS15045 11dcfcbf31ce7f542ea1a60c572097fa 182 Hamap MF_00648 Non-canonical purine NTP phosphatase. 9 178 30.443 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase AL539_RS22690 60f84667a91c71f956268234ef1c5caa 219 SUPERFAMILY SSF51161 65 213 5.96E-37 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS22690 60f84667a91c71f956268234ef1c5caa 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 2.2E-9 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS22690 60f84667a91c71f956268234ef1c5caa 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL539_RS22690 60f84667a91c71f956268234ef1c5caa 219 Gene3D G3DSA:2.160.10.10 1 218 5.8E-41 T 29-03-2018 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 SUPERFAMILY SSF47644 654 740 3.53E-29 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.5E-122 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 SUPERFAMILY SSF52242 746 895 6.41E-46 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 PIRSF PIRSF000381 3 1197 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 SMART SM01018 658 741 1.1E-45 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 4.3E-81 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Gene3D G3DSA:3.20.20.330 1 342 2.6E-113 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.8E-59 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Pfam PF02607 B12 binding domain 660 734 1.0E-25 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 SUPERFAMILY SSF56507 903 1225 1.44E-131 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Pfam PF02310 B12 binding domain 749 842 4.4E-18 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 SUPERFAMILY SSF51717 357 631 1.83E-87 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 SUPERFAMILY SSF82282 8 400 1.27E-118 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Gene3D G3DSA:3.10.196.10 958 1081 5.0E-43 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Gene3D G3DSA:3.10.196.10 1082 1226 7.3E-61 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Gene3D G3DSA:1.10.1240.10 653 732 2.7E-37 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Gene3D G3DSA:3.20.20.20 346 645 2.8E-73 T 29-03-2018 AL539_RS10105 5df2b8cae68494cb81e2679fbd032287 1226 Gene3D G3DSA:3.40.50.280 733 906 6.3E-58 T 29-03-2018 AL539_RS19990 bc3acadf7200aabe144dcc4be258c1c8 168 PIRSF PIRSF028301 1 168 2.5E-63 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL539_RS19990 bc3acadf7200aabe144dcc4be258c1c8 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 1.1E-56 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL539_RS19990 bc3acadf7200aabe144dcc4be258c1c8 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 8.4E-59 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL539_RS20065 4bec378d985b542a5656fb6fc8688791 320 SUPERFAMILY SSF51261 58 289 3.87E-51 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS20065 4bec378d985b542a5656fb6fc8688791 320 Gene3D G3DSA:2.70.70.10 157 318 9.2E-40 T 29-03-2018 AL539_RS20065 4bec378d985b542a5656fb6fc8688791 320 Pfam PF01551 Peptidase family M23 191 284 5.3E-30 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 Gene3D G3DSA:1.20.140.10 217 383 9.0E-61 T 29-03-2018 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.0E-23 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.7E-49 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 8.3E-26 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 Gene3D G3DSA:1.10.540.10 1 119 7.9E-32 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 Gene3D G3DSA:2.40.110.10 120 216 3.2E-37 T 29-03-2018 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 PIRSF PIRSF016578 4 192 3.8E-10 T 29-03-2018 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 PIRSF PIRSF016578 225 378 2.6E-13 T 29-03-2018 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 SUPERFAMILY SSF56645 1 240 3.8E-78 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL539_RS19630 a5b34609452d5d5c3651733017e57fc6 384 SUPERFAMILY SSF47203 225 378 1.37E-58 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS08715 239fe165223c9212e503046245cd141f 887 Gene3D G3DSA:3.40.50.970 472 706 1.3E-66 T 29-03-2018 AL539_RS08715 239fe165223c9212e503046245cd141f 887 Gene3D G3DSA:3.40.50.920 707 887 4.1E-39 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS08715 239fe165223c9212e503046245cd141f 887 SUPERFAMILY SSF52518 475 701 3.65E-98 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS08715 239fe165223c9212e503046245cd141f 887 SUPERFAMILY SSF52922 702 886 4.4E-59 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS08715 239fe165223c9212e503046245cd141f 887 PIRSF PIRSF000156 1 887 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL539_RS08715 239fe165223c9212e503046245cd141f 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL539_RS08715 239fe165223c9212e503046245cd141f 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 1.8E-9 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS08715 239fe165223c9212e503046245cd141f 887 SUPERFAMILY SSF52518 56 469 1.09E-139 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS08715 239fe165223c9212e503046245cd141f 887 Gene3D G3DSA:3.40.50.970 55 471 2.3E-83 T 29-03-2018 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SUPERFAMILY SSF55666 451 550 1.05E-27 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 5.3E-19 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 3.6E-20 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SUPERFAMILY SSF54211 5 145 1.47E-48 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.138 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Gene3D G3DSA:3.30.230.70 318 545 5.6E-57 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Gene3D G3DSA:1.10.10.400 254 317 3.9E-21 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 4.4E-25 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Gene3D G3DSA:2.40.50.140 620 697 9.5E-24 T 29-03-2018 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SUPERFAMILY SSF55666 146 236 2.1E-28 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Pfam PF00013 KH domain 557 615 3.9E-8 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SUPERFAMILY SSF54791 555 640 5.48E-22 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Pfam PF00575 S1 RNA binding domain 620 691 3.9E-18 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Gene3D G3DSA:3.30.1370.10 555 619 7.7E-14 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 PIRSF PIRSF005499 2 711 4.4E-297 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.6E-12 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SMART SM00322 553 618 1.1E-10 T 29-03-2018 IPR004087 K Homology domain GO:0003676 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 Gene3D G3DSA:3.30.230.70 15 253 2.6E-52 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SMART SM00316 621 691 4.5E-25 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SUPERFAMILY SSF54211 293 489 1.77E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS08385 46087475af5d44071351250b0cb0f430 711 SUPERFAMILY SSF50249 621 704 2.68E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06170 f0fe91374399e21c3942f675eea3d87f 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 5.9E-26 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AL539_RS06170 f0fe91374399e21c3942f675eea3d87f 427 Pfam PF02687 FtsX-like permease family 322 420 7.3E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS20285 c143c7b0378ae45306fd2aef415520de 350 PIRSF PIRSF001361 1 350 2.9E-162 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL539_RS20285 c143c7b0378ae45306fd2aef415520de 350 Gene3D G3DSA:3.20.20.70 7 350 1.1E-133 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS20285 c143c7b0378ae45306fd2aef415520de 350 Pfam PF00793 DAHP synthetase I family 38 337 5.6E-106 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL539_RS20285 c143c7b0378ae45306fd2aef415520de 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 6.4E-170 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL539_RS20285 c143c7b0378ae45306fd2aef415520de 350 SUPERFAMILY SSF51569 6 347 7.75E-137 T 29-03-2018 AL539_RS12550 3440538f7c593c8abc59083679965176 203 SUPERFAMILY SSF51569 3 201 1.06E-66 T 29-03-2018 AL539_RS12550 3440538f7c593c8abc59083679965176 203 Gene3D G3DSA:3.20.20.70 1 203 5.6E-35 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS12550 3440538f7c593c8abc59083679965176 203 Pfam PF01081 KDPG and KHG aldolase 5 197 4.9E-73 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL539_RS12550 3440538f7c593c8abc59083679965176 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 5.5E-83 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL539_RS12550 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 29-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL539_RS12550 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 4 78 1.6E-15 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 29-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 29-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12170 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 Gene3D G3DSA:1.20.1330.10 39 346 6.2E-59 T 29-03-2018 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 5.6E-34 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 PRINTS PR00207 Flagellin signature 36 53 2.8E-21 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 PRINTS PR00207 Flagellin signature 110 133 2.8E-21 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 PRINTS PR00207 Flagellin signature 75 94 2.8E-21 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 5.6E-21 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 Pfam PF07196 Flagellin hook IN motif 200 245 2.0E-6 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS16525 58c0f5c670af7c996ce18d3de5293d2b 374 SUPERFAMILY SSF64518 1 373 9.15E-76 T 29-03-2018 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:2.40.30.10 803 901 1.4E-30 T 29-03-2018 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 320 902 1.7E-284 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:2.40.30.10 565 700 3.6E-12 T 29-03-2018 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF52540 401 567 4.39E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:3.40.50.300 398 564 1.2E-37 T 29-03-2018 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF50447 576 657 1.02E-22 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 406 560 2.5E-34 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF11987 Translation-initiation factor 2 687 792 2.0E-37 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 900 17.644 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.3E-16 T 29-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF46955 3 50 1.76E-12 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 328 377 5.8E-14 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-8 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF03144 Elongation factor Tu domain 2 823 889 3.2E-7 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:3.30.56.50 4 45 1.5E-10 T 29-03-2018 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:3.30.56.50 331 370 1.8E-9 T 29-03-2018 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF50447 804 900 8.44E-35 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF00009 Elongation factor Tu GTP binding domain 406 562 4.7E-32 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:3.40.50.10050 701 781 4.5E-27 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 ProSitePatterns PS01176 Initiation factor 2 signature. 853 875 - T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL539_RS08405 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF52156 680 809 8.76E-39 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL539_RS24350 7ec2bfec3f0904c3397c9f5f454cd6e3 351 Gene3D G3DSA:3.40.50.2000 35 173 1.4E-9 T 29-03-2018 AL539_RS24350 7ec2bfec3f0904c3397c9f5f454cd6e3 351 Gene3D G3DSA:3.40.50.2000 178 339 9.1E-37 T 29-03-2018 AL539_RS24350 7ec2bfec3f0904c3397c9f5f454cd6e3 351 Pfam PF13439 Glycosyltransferase Family 4 72 162 1.5E-12 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL539_RS24350 7ec2bfec3f0904c3397c9f5f454cd6e3 351 SUPERFAMILY SSF53756 2 349 2.43E-68 T 29-03-2018 AL539_RS24350 7ec2bfec3f0904c3397c9f5f454cd6e3 351 Pfam PF00534 Glycosyl transferases group 1 169 324 1.9E-32 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS14580 5e1ba94e8159f927c4ef57fc79b6ff69 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.843 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS14580 5e1ba94e8159f927c4ef57fc79b6ff69 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 2.7E-47 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS14580 5e1ba94e8159f927c4ef57fc79b6ff69 355 Gene3D G3DSA:3.40.50.2000 1 170 2.8E-46 T 29-03-2018 AL539_RS14580 5e1ba94e8159f927c4ef57fc79b6ff69 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 2.3E-118 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS14580 5e1ba94e8159f927c4ef57fc79b6ff69 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 332 2.0E-35 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AL539_RS14580 5e1ba94e8159f927c4ef57fc79b6ff69 355 SUPERFAMILY SSF53756 5 352 2.79E-126 T 29-03-2018 AL539_RS14580 5e1ba94e8159f927c4ef57fc79b6ff69 355 Gene3D G3DSA:3.40.50.2000 171 346 8.0E-33 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Pfam PF01131 DNA topoisomerase 164 571 6.2E-128 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 SUPERFAMILY SSF57783 705 747 2.04E-5 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 SUPERFAMILY SSF57783 749 812 2.21E-19 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 4.2E-18 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:3.40.50.140 1 170 1.0E-49 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:2.70.20.10 353 473 1.2E-36 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:1.10.460.10 474 589 2.4E-26 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:1.10.460.10 171 349 2.6E-44 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 728 53.913 T 29-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 7.2E-36 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 7.2E-36 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 7.2E-36 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 7.2E-36 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 7.2E-36 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:3.30.65.10 590 651 2.2E-10 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:3.30.65.10 751 812 8.7E-10 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:3.30.65.10 701 750 1.9E-8 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 SUPERFAMILY SSF56712 3 615 8.5E-199 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 SMART SM00436 140 228 2.5E-47 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Gene3D G3DSA:2.20.25.10 814 868 1.3E-27 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 4.8E-5 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 SMART SM00437 279 533 1.4E-117 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 SUPERFAMILY SSF57783 814 870 1.31E-21 T 29-03-2018 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 SMART SM00493 3 139 4.3E-33 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 1.6E-248 T 29-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL539_RS17645 c1b523d24633a26c121bfc5de5adfd50 876 Pfam PF01751 Toprim domain 5 149 5.3E-32 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS24960 4eae2cc5c3624218fa1bd9281d557e56 427 Gene3D G3DSA:3.10.350.10 71 126 7.5E-4 T 29-03-2018 AL539_RS24960 4eae2cc5c3624218fa1bd9281d557e56 427 Pfam PF01551 Peptidase family M23 295 388 2.4E-32 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS24960 4eae2cc5c3624218fa1bd9281d557e56 427 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 154 3.0E-6 T 29-03-2018 IPR007340 Opacity-associated protein A AL539_RS24960 4eae2cc5c3624218fa1bd9281d557e56 427 Gene3D G3DSA:2.70.70.10 262 426 1.8E-44 T 29-03-2018 AL539_RS24960 4eae2cc5c3624218fa1bd9281d557e56 427 SUPERFAMILY SSF51261 143 390 3.92E-68 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS08005 b29881237219a215cebe5d07f0b5977b 194 SUPERFAMILY SSF88946 8 118 5.23E-26 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08005 b29881237219a215cebe5d07f0b5977b 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 1.8E-30 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08005 b29881237219a215cebe5d07f0b5977b 194 Gene3D G3DSA:1.10.1740.10 10 102 2.8E-20 T 29-03-2018 AL539_RS08005 b29881237219a215cebe5d07f0b5977b 194 Pfam PF04545 Sigma-70, region 4 139 187 1.4E-13 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08005 b29881237219a215cebe5d07f0b5977b 194 Pfam PF04542 Sigma-70 region 2 34 99 5.2E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08005 b29881237219a215cebe5d07f0b5977b 194 SUPERFAMILY SSF88659 127 189 1.35E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08005 b29881237219a215cebe5d07f0b5977b 194 Gene3D G3DSA:1.10.10.10 103 192 2.1E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 5.9E-5 T 29-03-2018 IPR000641 CbxX/CfqX GO:0005524 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 5.9E-5 T 29-03-2018 IPR000641 CbxX/CfqX GO:0005524 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 5.9E-5 T 29-03-2018 IPR000641 CbxX/CfqX GO:0005524 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 Gene3D G3DSA:3.40.50.300 1 176 9.9E-27 T 29-03-2018 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 Gene3D G3DSA:1.10.10.60 240 330 4.1E-9 T 29-03-2018 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 SUPERFAMILY SSF46689 219 330 1.16E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 328 1.2E-164 T 29-03-2018 IPR014317 Transcription activator PspF AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 SMART SM00382 25 177 1.7E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 311 331 3.4E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 294 311 3.4E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 Pfam PF02954 Bacterial regulatory protein, Fis family 294 322 3.6E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 Gene3D G3DSA:1.10.8.60 178 239 3.4E-18 T 29-03-2018 AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 SUPERFAMILY SSF52540 4 237 2.08E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01790 7bb1f8b3faff6571a9f9a0bbc17597c9 334 Pfam PF00158 Sigma-54 interaction domain 5 167 1.9E-57 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 SUPERFAMILY SSF81901 108 245 1.07E-27 T 29-03-2018 AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 SUPERFAMILY SSF81901 41 142 6.15E-21 T 29-03-2018 AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Pfam PF08238 Sel1 repeat 133 170 4.9 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Pfam PF08238 Sel1 repeat 207 242 2.5E-5 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Pfam PF08238 Sel1 repeat 50 62 3.4 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Pfam PF08238 Sel1 repeat 63 97 4.0E-8 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Pfam PF08238 Sel1 repeat 171 205 8.9E-4 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Pfam PF08238 Sel1 repeat 101 130 0.014 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 SMART SM00671 207 242 2.5E-7 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 SMART SM00671 171 206 1.8E-4 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 SMART SM00671 63 98 8.2E-9 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 SMART SM00671 100 130 140.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 SMART SM00671 131 170 32.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Gene3D G3DSA:2.60.40.1180 145 259 6.2E-20 T 29-03-2018 AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Gene3D G3DSA:2.60.40.1180 11 99 1.7E-14 T 29-03-2018 AL539_RS00350 c941a396987c3c6770d2dc395616f65b 263 Gene3D G3DSA:2.60.40.1180 100 143 3.7E-5 T 29-03-2018 AL539_RS07885 b8e084133566f96a096f03bb6059df30 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 6.0E-27 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 AL539_RS07885 b8e084133566f96a096f03bb6059df30 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.6E-36 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 AL539_RS07885 b8e084133566f96a096f03bb6059df30 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.93 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 AL539_RS24515 5aeca72f84a7c0a3f16064a930f29227 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 3.6E-27 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 AL539_RS24515 5aeca72f84a7c0a3f16064a930f29227 99 Gene3D G3DSA:3.30.70.860 18 95 2.8E-30 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 Gene3D G3DSA:3.40.50.2300 556 681 1.9E-36 T 29-03-2018 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 SMART SM00448 563 677 5.5E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 SMART SM00387 305 413 8.5E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 Gene3D G3DSA:1.10.287.130 171 256 1.5E-4 T 29-03-2018 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 SUPERFAMILY SSF52172 561 681 5.27E-35 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 Gene3D G3DSA:3.30.565.10 257 413 8.9E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 412 2.9E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 1.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 1.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 1.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 SUPERFAMILY SSF55874 250 416 1.44E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 Pfam PF00072 Response regulator receiver domain 565 677 1.8E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19210 aede3d56a0ec8d1fd67eebe48afe517c 681 SUPERFAMILY SSF47384 171 233 3.14E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS07065 8ddd8fea3e1fea37484b9aa1f9fcc426 1479 Gene3D G3DSA:1.20.120.330 191 289 5.3E-6 T 29-03-2018 AL539_RS07065 8ddd8fea3e1fea37484b9aa1f9fcc426 1479 Gene3D G3DSA:1.20.58.60 433 804 0.34 T 29-03-2018 AL539_RS07065 8ddd8fea3e1fea37484b9aa1f9fcc426 1479 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1434 1475 1.5E-13 T 29-03-2018 IPR020011 Motility protein FimV, C-terminal AL539_RS07065 8ddd8fea3e1fea37484b9aa1f9fcc426 1479 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 144 2.2E-25 T 29-03-2018 IPR020012 Motility protein FimV, N-terminal AL539_RS07065 8ddd8fea3e1fea37484b9aa1f9fcc426 1479 Gene3D G3DSA:3.10.350.10 68 136 3.7E-5 T 29-03-2018 AL539_RS24845 e96ba75a2e0d9b64b73beca091c0723e 259 Gene3D G3DSA:1.10.10.60 126 205 0.0015 T 29-03-2018 AL539_RS24845 e96ba75a2e0d9b64b73beca091c0723e 259 SUPERFAMILY SSF46689 207 256 1.34E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS24845 e96ba75a2e0d9b64b73beca091c0723e 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS24845 e96ba75a2e0d9b64b73beca091c0723e 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS24845 e96ba75a2e0d9b64b73beca091c0723e 259 Gene3D G3DSA:1.10.10.60 206 258 1.7E-13 T 29-03-2018 AL539_RS24845 e96ba75a2e0d9b64b73beca091c0723e 259 SMART SM00342 172 254 8.5E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS24845 e96ba75a2e0d9b64b73beca091c0723e 259 Pfam PF12833 Helix-turn-helix domain 179 255 9.3E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS16625 6f24de7993f93e25c3195c2671d49408 135 Pfam PF00571 CBS domain 78 125 2.1E-9 T 29-03-2018 IPR000644 CBS domain AL539_RS16625 6f24de7993f93e25c3195c2671d49408 135 SMART SM00116 83 130 3.7E-5 T 29-03-2018 IPR000644 CBS domain AL539_RS16625 6f24de7993f93e25c3195c2671d49408 135 SMART SM00116 16 65 11.0 T 29-03-2018 IPR000644 CBS domain AL539_RS16625 6f24de7993f93e25c3195c2671d49408 135 Gene3D G3DSA:3.10.580.10 1 134 2.9E-21 T 29-03-2018 AL539_RS16625 6f24de7993f93e25c3195c2671d49408 135 SUPERFAMILY SSF54631 7 126 6.57E-24 T 29-03-2018 AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 1.2E-40 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 9.2E-16 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 Gene3D G3DSA:3.90.650.10 172 346 5.8E-66 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 Gene3D G3DSA:3.30.1330.10 36 162 3.3E-54 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 SUPERFAMILY SSF56042 172 341 3.74E-62 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.6E-151 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 SUPERFAMILY SSF55326 8 171 2.54E-54 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AL539_RS07585 cf110edf186f92f66016ca4ee01cf9d0 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.824 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 Pfam PF02803 Thiolase, C-terminal domain 270 399 2.3E-46 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 PIRSF PIRSF000429 1 402 1.7E-132 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 Gene3D G3DSA:3.40.47.10 270 398 9.9E-31 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 SUPERFAMILY SSF53901 271 399 1.44E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 Pfam PF00108 Thiolase, N-terminal domain 4 263 2.9E-99 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 Gene3D G3DSA:3.40.47.10 1 269 4.7E-62 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 2.7E-150 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS20395 417affdd6e144ca9483c10b30848cca4 402 SUPERFAMILY SSF53901 4 270 6.51E-85 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS17285 795282f39028b64398954af1a36ccf8e 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 9.7E-23 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS17285 795282f39028b64398954af1a36ccf8e 191 SUPERFAMILY SSF56925 31 191 3.14E-13 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS17285 795282f39028b64398954af1a36ccf8e 191 Gene3D G3DSA:2.40.160.20 7 191 2.3E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS12330 866ffbe8c32bc080c90950a31ef19b89 82 Gene3D G3DSA:3.30.110.40 6 81 1.1E-26 T 29-03-2018 IPR001455 TusA-like domain AL539_RS12330 866ffbe8c32bc080c90950a31ef19b89 82 Pfam PF01206 Sulfurtransferase TusA 10 79 1.0E-22 T 29-03-2018 IPR001455 TusA-like domain AL539_RS12330 866ffbe8c32bc080c90950a31ef19b89 82 SUPERFAMILY SSF64307 10 80 6.41E-25 T 29-03-2018 IPR001455 TusA-like domain AL539_RS12330 866ffbe8c32bc080c90950a31ef19b89 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.019 T 29-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AL539_RS12330 866ffbe8c32bc080c90950a31ef19b89 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 29-03-2018 IPR001455 TusA-like domain AL539_RS07640 39b2fe708ae93d4d8bfa313c13c29557 154 SUPERFAMILY SSF53098 3 143 1.64E-58 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS07640 39b2fe708ae93d4d8bfa313c13c29557 154 Gene3D G3DSA:3.30.420.10 1 153 7.0E-53 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS07640 39b2fe708ae93d4d8bfa313c13c29557 154 Pfam PF00075 RNase H 3 141 2.9E-54 T 29-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AL539_RS07640 39b2fe708ae93d4d8bfa313c13c29557 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.605 T 29-03-2018 IPR022892 Ribonuclease HI GO:0004523 AL539_RS25225 95cb6eb4b66a317a9d3b7a402691d698 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25225 95cb6eb4b66a317a9d3b7a402691d698 292 SUPERFAMILY SSF53850 93 289 2.71E-22 T 29-03-2018 AL539_RS25225 95cb6eb4b66a317a9d3b7a402691d698 292 Pfam PF03466 LysR substrate binding domain 111 287 1.8E-15 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS25225 95cb6eb4b66a317a9d3b7a402691d698 292 Gene3D G3DSA:3.40.190.10 82 199 5.0E-11 T 29-03-2018 AL539_RS25225 95cb6eb4b66a317a9d3b7a402691d698 292 SUPERFAMILY SSF46785 1 86 3.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25225 95cb6eb4b66a317a9d3b7a402691d698 292 Gene3D G3DSA:1.10.10.10 1 81 2.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS00210 bb7dd5dd21b5aa664f5e8716512ceaa2 527 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 1 525 5.0E-127 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL539_RS00210 bb7dd5dd21b5aa664f5e8716512ceaa2 527 Pfam PF02652 L-lactate permease 3 524 2.6E-133 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL539_RS25790 915c912fae3be337ce619d076672dfcc 132 SUPERFAMILY SSF55298 12 127 4.24E-29 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL539_RS25790 915c912fae3be337ce619d076672dfcc 132 Pfam PF01042 Endoribonuclease L-PSP 18 126 2.7E-22 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AL539_RS25790 915c912fae3be337ce619d076672dfcc 132 Gene3D G3DSA:3.30.1330.40 4 129 2.8E-26 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL539_RS24090 853f2658b27f66e943fef0b495056178 310 SUPERFAMILY SSF161098 34 305 6.02E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24090 853f2658b27f66e943fef0b495056178 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 2.3E-91 T 29-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AL539_RS24090 853f2658b27f66e943fef0b495056178 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 7.8E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24090 853f2658b27f66e943fef0b495056178 310 Gene3D G3DSA:1.10.3720.10 24 302 9.4E-38 T 29-03-2018 AL539_RS02935 820b5527482d16d743c65ca31d0d626e 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 317 2.7E-50 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AL539_RS02935 820b5527482d16d743c65ca31d0d626e 335 SUPERFAMILY SSF53850 28 332 9.77E-89 T 29-03-2018 AL539_RS02935 820b5527482d16d743c65ca31d0d626e 335 Gene3D G3DSA:3.40.190.10 26 159 5.6E-14 T 29-03-2018 AL539_RS02935 820b5527482d16d743c65ca31d0d626e 335 Gene3D G3DSA:3.40.190.10 160 330 1.4E-30 T 29-03-2018 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.1E-123 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Gene3D G3DSA:3.40.50.670 396 625 8.7E-82 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 SMART SM00387 27 173 3.4E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 SUPERFAMILY SSF56719 388 619 6.02E-80 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.952 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 SMART SM00433 34 622 5.1E-218 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF01751 Toprim domain 413 521 5.6E-12 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 SUPERFAMILY SSF55874 5 215 2.01E-66 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.5E-58 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF00204 DNA gyrase B 218 384 2.1E-42 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 SUPERFAMILY SSF54211 217 382 3.22E-47 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.1E-26 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Gene3D G3DSA:3.30.565.10 17 216 1.0E-65 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS14430 15da716a25e6a6931f4d27b36f9a3be2 626 Gene3D G3DSA:3.30.230.10 217 391 4.9E-41 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Gene3D G3DSA:1.10.150.20 433 506 1.8E-24 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 7.8E-36 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SUPERFAMILY SSF50249 319 400 8.74E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SUPERFAMILY SSF56091 5 317 7.68E-125 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 3.0E-23 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Gene3D G3DSA:3.30.1490.70 240 322 9.5E-27 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Gene3D G3DSA:1.10.150.20 507 572 4.2E-27 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 PIRSF PIRSF001604 1 670 5.2E-257 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 668 9.7E-14 T 29-03-2018 IPR001357 BRCT domain AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SMART SM00532 4 449 2.0E-279 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Gene3D G3DSA:3.40.50.10190 573 670 2.7E-24 T 29-03-2018 IPR001357 BRCT domain AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SMART SM00292 595 670 7.6E-11 T 29-03-2018 IPR001357 BRCT domain AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Gene3D G3DSA:1.10.287.610 1 68 4.7E-24 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SUPERFAMILY SSF52113 594 669 1.7E-18 T 29-03-2018 IPR001357 BRCT domain AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 54.218 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Gene3D G3DSA:2.40.50.140 323 391 8.6E-35 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 9.0E-12 T 29-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Gene3D G3DSA:3.30.470.30 120 239 3.0E-53 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 319 2.8E-135 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 Pfam PF14520 Helix-hairpin-helix domain 447 503 1.2E-5 T 29-03-2018 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SUPERFAMILY SSF47781 404 585 5.56E-62 T 29-03-2018 IPR010994 RuvA domain 2-like AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 9.8E-269 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SMART SM00278 481 500 11.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SMART SM00278 447 466 95.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS16565 13500af3da7dd43c32b3e9f68f46ccf2 670 SMART SM00278 545 564 270.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 SMART SM00870 29 348 1.5E-148 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 Gene3D G3DSA:3.40.50.1170 25 237 2.1E-60 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 Gene3D G3DSA:3.40.50.40 241 353 4.5E-31 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 Pfam PF00710 Asparaginase, N-terminal 29 222 2.7E-61 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 SUPERFAMILY SSF53774 27 352 6.54E-108 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 PIRSF PIRSF500176 26 354 1.1E-82 T 29-03-2018 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 32 40 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 PRINTS PR00139 Asparaginase/glutaminase family signature 30 41 3.7E-24 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 PRINTS PR00139 Asparaginase/glutaminase family signature 288 306 3.7E-24 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 3.7E-24 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 16 354 3.6E-161 T 29-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AL539_RS21010 0993519d947655d24f3f396428657ab9 354 PIRSF PIRSF001220 24 354 9.2E-96 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 864 0.0 T 29-03-2018 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.667 T 29-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 SMART SM00434 11 498 5.7E-303 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 SUPERFAMILY SSF56719 30 520 1.44E-187 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 3.2E-158 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:3.90.199.10 285 374 2.5E-9 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:3.90.199.10 34 284 1.5E-118 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:1.10.268.10 375 496 3.4E-51 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.3E-10 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.2E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 8.7E-9 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 812 2.4E-13 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.1E-6 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 8.0E-12 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 713 0.034 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:2.120.10.90 532 881 2.7E-131 T 29-03-2018 AL539_RS05825 920c7d798ae28f3892901f5717099a2a 906 SUPERFAMILY SSF101904 532 874 2.22E-106 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL539_RS16325 2506f67bd731bba311bdb887dcdd30fb 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 9.5E-26 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS16325 2506f67bd731bba311bdb887dcdd30fb 157 Gene3D G3DSA:3.90.960.10 1 157 4.4E-42 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS16325 2506f67bd731bba311bdb887dcdd30fb 157 PIRSF PIRSF006181 1 157 1.0E-53 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL539_RS16325 2506f67bd731bba311bdb887dcdd30fb 157 SUPERFAMILY SSF55826 2 156 4.84E-44 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS16325 2506f67bd731bba311bdb887dcdd30fb 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 9.9E-60 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL539_RS02140 66a6dab6f4e5012e2356ea4c2c59ba85 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 2.0E-96 T 29-03-2018 IPR021246 Protein of unknown function DUF2797 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 SUPERFAMILY SSF51735 2 128 5.25E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Pfam PF13549 ATP-grasp domain 470 690 4.0E-67 T 29-03-2018 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Pfam PF13380 CoA binding domain 12 100 2.8E-15 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Gene3D G3DSA:3.40.50.720 3 104 1.8E-22 T 29-03-2018 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 SUPERFAMILY SSF55729 722 861 9.92E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 SMART SM00881 7 102 4.2E-20 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Gene3D G3DSA:3.30.1490.20 496 557 1.6E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 SUPERFAMILY SSF56059 477 683 6.13E-25 T 29-03-2018 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Gene3D G3DSA:3.30.470.20 558 708 2.5E-23 T 29-03-2018 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 1.9E-6 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Gene3D G3DSA:3.40.630.30 712 873 5.3E-18 T 29-03-2018 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Gene3D G3DSA:3.40.50.261 111 277 2.0E-30 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Gene3D G3DSA:3.40.50.261 278 446 5.6E-36 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 8.4E-43 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 SUPERFAMILY SSF52210 281 441 5.23E-40 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS18505 3c17f26f49de2063492e59c7f90e13c2 877 SUPERFAMILY SSF52210 118 276 5.23E-32 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS15550 29743eea148288d72654672818e842de 200 Pfam PF01381 Helix-turn-helix 26 79 3.0E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS15550 29743eea148288d72654672818e842de 200 Gene3D G3DSA:1.10.260.40 13 86 8.2E-16 T 29-03-2018 AL539_RS15550 29743eea148288d72654672818e842de 200 Pfam PF07883 Cupin domain 126 193 1.0E-10 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AL539_RS15550 29743eea148288d72654672818e842de 200 SUPERFAMILY SSF47413 18 83 7.24E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS15550 29743eea148288d72654672818e842de 200 SMART SM00530 25 80 2.2E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS15550 29743eea148288d72654672818e842de 200 Gene3D G3DSA:2.60.120.10 87 194 2.9E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS15550 29743eea148288d72654672818e842de 200 SUPERFAMILY SSF51182 62 192 6.68E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS24520 05144672c3621599fe760d95e6d28fca 153 Gene3D G3DSA:1.10.10.60 2 38 1.4E-6 T 29-03-2018 AL539_RS24520 05144672c3621599fe760d95e6d28fca 153 Gene3D G3DSA:1.10.287.790 69 107 2.7E-23 T 29-03-2018 IPR027404 LuxT regulator, helix hairpin domain AL539_RS24520 05144672c3621599fe760d95e6d28fca 153 Gene3D G3DSA:1.20.5.830 111 152 3.5E-24 T 29-03-2018 IPR027402 LuxT regulator, C-terminal domain AL539_RS24520 05144672c3621599fe760d95e6d28fca 153 Gene3D G3DSA:1.10.260.40 39 68 5.4E-4 T 29-03-2018 AL539_RS24520 05144672c3621599fe760d95e6d28fca 153 SUPERFAMILY SSF46689 1 74 1.13E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS23950 83290eaa58d947661b2cf52c6be17b89 325 Gene3D G3DSA:3.90.1200.10 118 301 4.3E-14 T 29-03-2018 AL539_RS23950 83290eaa58d947661b2cf52c6be17b89 325 Pfam PF02958 Ecdysteroid kinase 170 267 1.6E-10 T 29-03-2018 IPR004119 Protein of unknown function DUF227 AL539_RS23950 83290eaa58d947661b2cf52c6be17b89 325 Pfam PF02958 Ecdysteroid kinase 77 146 3.1E-4 T 29-03-2018 IPR004119 Protein of unknown function DUF227 AL539_RS23950 83290eaa58d947661b2cf52c6be17b89 325 SUPERFAMILY SSF56112 26 324 3.74E-25 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS23950 83290eaa58d947661b2cf52c6be17b89 325 SMART SM00587 112 269 0.0017 T 29-03-2018 IPR015897 CHK kinase-like AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Gene3D G3DSA:3.30.565.10 17 220 1.2E-76 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 5.2E-86 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Pfam PF00204 DNA gyrase B 221 391 1.3E-60 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.8E-29 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 SUPERFAMILY SSF55874 4 212 5.5E-75 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 4.2E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 SUPERFAMILY SSF56719 395 561 7.85E-88 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 SUPERFAMILY SSF56719 731 796 7.85E-88 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.7E-70 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 SUPERFAMILY SSF54211 221 393 7.4E-59 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.22 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 SMART SM00387 31 175 1.3E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Gene3D G3DSA:3.30.230.10 221 393 1.1E-63 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 Gene3D G3DSA:3.40.50.670 403 802 4.8E-109 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS12275 9d694598bfe9ae85c9fda6a931da194a 805 SMART SM00433 35 798 1.1E-275 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 Gene3D G3DSA:3.90.770.10 190 408 2.1E-52 T 29-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 Gene3D G3DSA:3.90.770.10 41 189 2.6E-25 T 29-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 29-03-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 SUPERFAMILY SSF55035 146 261 5.89E-36 T 29-03-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 3.7E-39 T 29-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 3.7E-39 T 29-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 3.7E-39 T 29-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 3.7E-39 T 29-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 3.7E-39 T 29-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 3.7E-39 T 29-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 7.3E-112 T 29-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 SUPERFAMILY SSF56542 259 409 2.75E-79 T 29-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS18220 2e6b5ce7430db6f71900cc7391cf92e0 420 SUPERFAMILY SSF56542 26 143 2.75E-79 T 29-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 SUPERFAMILY SSF52794 164 260 1.31E-34 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 SUPERFAMILY SSF55804 1 145 3.4E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.9E-35 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 278 620 7.0E-87 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 4.0E-42 T 29-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 255 3.7E-15 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 1.7E-30 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 Gene3D G3DSA:3.40.930.10 1 149 2.0E-37 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 Gene3D G3DSA:3.40.50.2300 163 259 1.5E-36 T 29-03-2018 AL539_RS20110 d52518968e56a9bc1046e6787967cd4b 635 Pfam PF02378 Phosphotransferase system, EIIC 292 567 3.0E-16 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS05570 e2197caca465e14b28624926f4c82fee 458 PIRSF PIRSF019381 1 458 1.6E-198 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL539_RS05570 e2197caca465e14b28624926f4c82fee 458 Pfam PF04317 YcjX-like family, DUF463 20 457 7.0E-187 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL539_RS05570 e2197caca465e14b28624926f4c82fee 458 Gene3D G3DSA:3.40.50.300 14 379 1.3E-16 T 29-03-2018 AL539_RS01175 21d2bad748a5b9a7e7bef337e6d31704 323 SUPERFAMILY SSF52540 24 284 1.19E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01175 21d2bad748a5b9a7e7bef337e6d31704 323 Pfam PF07728 AAA domain (dynein-related subfamily) 68 189 9.3E-15 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AL539_RS01175 21d2bad748a5b9a7e7bef337e6d31704 323 Gene3D G3DSA:3.40.50.300 55 249 1.2E-19 T 29-03-2018 AL539_RS01175 21d2bad748a5b9a7e7bef337e6d31704 323 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 224 316 1.9E-18 T 29-03-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal AL539_RS19390 f253524c9f66ec1ad7c751458958747d 93 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 91 1.0E-25 T 29-03-2018 IPR014543 Uncharacterised conserved protein UCP028291 AL539_RS19390 f253524c9f66ec1ad7c751458958747d 93 PIRSF PIRSF028291 1 93 1.1E-27 T 29-03-2018 IPR014543 Uncharacterised conserved protein UCP028291 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 Gene3D G3DSA:1.10.3370.10 10 440 6.2E-157 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 29-03-2018 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 PIRSF PIRSF004557 10 442 1.2E-121 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 SUPERFAMILY SSF103491 15 425 1.44E-130 T 29-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 Pfam PF00344 SecY translocase 76 418 1.8E-117 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.181 T 29-03-2018 IPR026593 Protein translocase subunit SecY AL539_RS13625 aa65d80d87c097c53da0a66a6015af98 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.1E-134 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Pfam PF05193 Peptidase M16 inactive domain 648 822 2.9E-8 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 1.4E-25 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 SUPERFAMILY SSF63411 703 909 7.51E-45 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Gene3D G3DSA:3.30.830.10 692 918 1.5E-30 T 29-03-2018 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 8.0E-82 T 29-03-2018 IPR032632 Peptidase M16, middle/third domain AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Gene3D G3DSA:3.30.830.10 469 691 1.2E-32 T 29-03-2018 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 SUPERFAMILY SSF63411 470 693 7.67E-61 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Gene3D G3DSA:3.30.830.10 1 227 4.4E-81 T 29-03-2018 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Gene3D G3DSA:3.30.830.10 231 455 1.2E-68 T 29-03-2018 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 SUPERFAMILY SSF63411 232 468 1.07E-80 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 SUPERFAMILY SSF63411 4 226 1.92E-58 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS07145 0a30681ebdc3a62a0ac3e52a59735177 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 4.6E-39 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 8.6E-39 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 2.1E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 2.1E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 2.1E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 2.1E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 2.1E-22 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PIRSF PIRSF004862 27 580 1.4E-162 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 8.0E-72 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS07410 a0e1745c77f6156c4c8ed4d58d3dcca5 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 4.4E-54 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 SUPERFAMILY SSF55874 481 639 6.29E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 1.0E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 SUPERFAMILY SSF51206 201 311 9.56E-20 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 SUPERFAMILY SSF47384 335 375 2.16E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 SMART SM00387 528 641 1.1E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 Gene3D G3DSA:3.30.565.10 487 641 3.7E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 2.6E-15 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 Gene3D G3DSA:3.40.50.2300 1 140 8.3E-10 T 29-03-2018 AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 1.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 Gene3D G3DSA:2.60.120.10 178 319 2.5E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 SUPERFAMILY SSF52172 3 140 1.87E-7 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS02095 2ba6d37be51fac5be0d7fe1c5b83f410 646 Gene3D G3DSA:1.10.287.130 320 485 1.5E-10 T 29-03-2018 AL539_RS01390 b446f96736cf842e83a4af47287ea8c8 247 Pfam PF02384 N-6 DNA Methylase 67 132 9.7E-6 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL539_RS01390 b446f96736cf842e83a4af47287ea8c8 247 SUPERFAMILY SSF53335 65 163 1.33E-7 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS01390 b446f96736cf842e83a4af47287ea8c8 247 Gene3D G3DSA:3.40.50.150 87 216 5.0E-8 T 29-03-2018 AL539_RS12710 49fa648b1a72fe552be1034fd545f065 544 SUPERFAMILY SSF56112 94 158 3.41E-46 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS12710 49fa648b1a72fe552be1034fd545f065 544 SUPERFAMILY SSF56112 193 436 3.41E-46 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS12710 49fa648b1a72fe552be1034fd545f065 544 Gene3D G3DSA:3.30.200.20 103 244 5.7E-20 T 29-03-2018 AL539_RS12710 49fa648b1a72fe552be1034fd545f065 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 8.9E-176 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL539_RS12710 49fa648b1a72fe552be1034fd545f065 544 Pfam PF03109 ABC1 family 112 230 9.0E-36 T 29-03-2018 IPR004147 UbiB domain AL539_RS12710 49fa648b1a72fe552be1034fd545f065 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.517 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 SUPERFAMILY SSF50447 243 370 9.34E-22 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 SMART SM00838 578 666 9.9E-22 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Gene3D G3DSA:2.40.30.10 267 379 7.6E-19 T 29-03-2018 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Gene3D G3DSA:3.30.70.870 380 470 2.0E-20 T 29-03-2018 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 SUPERFAMILY SSF54211 457 577 2.78E-37 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Pfam PF00679 Elongation factor G C-terminus 579 665 4.5E-25 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 SUPERFAMILY SSF54980 381 457 3.27E-16 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 2.0E-29 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 SUPERFAMILY SSF52540 2 259 2.19E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Gene3D G3DSA:3.40.50.300 3 266 5.4E-33 T 29-03-2018 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 SUPERFAMILY SSF54980 579 669 4.65E-21 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 141 1.2E-12 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 SMART SM00889 458 576 3.0E-53 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Gene3D G3DSA:3.30.230.10 471 591 7.8E-37 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Gene3D G3DSA:3.30.70.240 592 670 1.2E-20 T 29-03-2018 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Pfam PF03764 Elongation factor G, domain IV 457 575 2.2E-36 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL539_RS21200 4a924cb905b97eae5c26b36911e62d0f 674 Pfam PF14492 Elongation Factor G, domain II 382 454 1.3E-21 T 29-03-2018 AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 7.7E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 7.7E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 7.7E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 7.7E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 Pfam PF01047 MarR family 31 88 1.3E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 SUPERFAMILY SSF46785 11 137 1.71E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 Gene3D G3DSA:1.10.10.10 9 139 1.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08375 3191427b4af0d4c6302ea611ea05cbfd 140 SMART SM00347 23 124 1.0E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 Pfam PF00108 Thiolase, N-terminal domain 6 260 2.4E-85 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 SUPERFAMILY SSF53901 5 268 5.38E-76 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 PIRSF PIRSF000429 1 392 1.2E-113 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 Gene3D G3DSA:3.40.47.10 270 389 1.1E-29 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 Gene3D G3DSA:3.40.47.10 2 269 1.1E-53 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 1.5E-131 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 1.9E-44 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AL539_RS19640 5513c39a88efccccf9a811424d83cae1 392 SUPERFAMILY SSF53901 270 390 3.6E-40 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS22950 11fe88a14db84c40fdbca232ef29ebea 365 SUPERFAMILY SSF48452 81 159 5.69E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22950 11fe88a14db84c40fdbca232ef29ebea 365 Gene3D G3DSA:1.25.40.10 76 186 3.0E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22950 11fe88a14db84c40fdbca232ef29ebea 365 Pfam PF02698 DUF218 domain 194 311 3.7E-19 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AL539_RS22950 11fe88a14db84c40fdbca232ef29ebea 365 Gene3D G3DSA:3.40.50.620 187 324 3.8E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS21765 e1620d98d0d2fa38b206419edcaf61bb 194 Gene3D G3DSA:2.170.170.11 21 189 9.3E-39 T 29-03-2018 AL539_RS21765 e1620d98d0d2fa38b206419edcaf61bb 194 SUPERFAMILY SSF51645 22 189 1.96E-24 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 SUPERFAMILY SSF50037 272 318 4.26E-10 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 SUPERFAMILY SSF46785 6 61 3.58E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 1.4E-8 T 29-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 Gene3D G3DSA:1.10.10.10 1 65 6.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 7.6E-20 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 3.3E-66 T 29-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 Pfam PF08279 HTH domain 9 60 1.8E-13 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.36 T 29-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 SUPERFAMILY SSF55681 70 269 7.33E-59 T 29-03-2018 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 Gene3D G3DSA:2.30.30.100 272 318 4.4E-13 T 29-03-2018 AL539_RS11260 5f6c03d273e4bd52a41cdcbafd40ab38 321 Gene3D G3DSA:3.30.930.10 66 271 1.7E-58 T 29-03-2018 AL539_RS01905 0ec91b7080a8cab8b39977b5a5034537 386 Gene3D G3DSA:3.40.190.10 38 174 0.0036 T 29-03-2018 AL539_RS01905 0ec91b7080a8cab8b39977b5a5034537 386 Gene3D G3DSA:3.40.190.10 175 344 1.1E-16 T 29-03-2018 AL539_RS01905 0ec91b7080a8cab8b39977b5a5034537 386 Pfam PF13416 Bacterial extracellular solute-binding protein 62 351 5.8E-22 T 29-03-2018 AL539_RS01905 0ec91b7080a8cab8b39977b5a5034537 386 PIRSF PIRSF029172 1 386 5.7E-175 T 29-03-2018 IPR027020 Protein ynjB AL539_RS01905 0ec91b7080a8cab8b39977b5a5034537 386 SUPERFAMILY SSF53850 39 384 4.19E-39 T 29-03-2018 AL539_RS01645 f17d0008f90fa326fe947dd77c88e7a8 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.504 T 29-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL539_RS01645 f17d0008f90fa326fe947dd77c88e7a8 245 SUPERFAMILY SSF51366 2 242 5.92E-63 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL539_RS01645 f17d0008f90fa326fe947dd77c88e7a8 245 Pfam PF00977 Histidine biosynthesis protein 2 234 2.6E-75 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AL539_RS01645 f17d0008f90fa326fe947dd77c88e7a8 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.6E-77 T 29-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL539_RS01645 f17d0008f90fa326fe947dd77c88e7a8 245 Gene3D G3DSA:3.20.20.70 1 245 2.9E-52 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS06710 51824a5f50f00ec617ba952c1060671a 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.5E-105 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AL539_RS06710 51824a5f50f00ec617ba952c1060671a 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.4E-139 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AL539_RS06710 51824a5f50f00ec617ba952c1060671a 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 348 27.372 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AL539_RS08030 20faa6a90e9d18dd7c402325b0b134fb 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 1.0E-36 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL539_RS08030 20faa6a90e9d18dd7c402325b0b134fb 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 1.2E-81 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL539_RS08030 20faa6a90e9d18dd7c402325b0b134fb 296 SUPERFAMILY SSF48179 168 290 3.2E-33 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS08030 20faa6a90e9d18dd7c402325b0b134fb 296 Gene3D G3DSA:3.40.50.720 2 166 9.8E-24 T 29-03-2018 AL539_RS08030 20faa6a90e9d18dd7c402325b0b134fb 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 7.5E-32 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AL539_RS08030 20faa6a90e9d18dd7c402325b0b134fb 296 Gene3D G3DSA:1.10.1040.10 167 296 3.3E-35 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS08030 20faa6a90e9d18dd7c402325b0b134fb 296 SUPERFAMILY SSF51735 2 165 1.92E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 29-03-2018 AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 64 158 3.1E-27 T 29-03-2018 AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01470 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 6 63 3.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21990 cbf7705156bb4678295553d7eeef23c9 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 1.3E-47 T 29-03-2018 IPR019613 Protein of unknown function DUF4198 AL539_RS21990 cbf7705156bb4678295553d7eeef23c9 276 Gene3D G3DSA:2.60.40.10 179 266 2.1E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS18710 c9fb3144d0af4cf10467aee948c720de 262 SUPERFAMILY SSF141868 27 257 2.09E-39 T 29-03-2018 IPR001633 EAL domain AL539_RS18710 c9fb3144d0af4cf10467aee948c720de 262 Pfam PF00563 EAL domain 27 249 5.0E-40 T 29-03-2018 IPR001633 EAL domain AL539_RS18710 c9fb3144d0af4cf10467aee948c720de 262 Gene3D G3DSA:3.20.20.450 19 261 9.3E-42 T 29-03-2018 IPR001633 EAL domain AL539_RS18710 c9fb3144d0af4cf10467aee948c720de 262 SMART SM00052 8 255 6.2E-10 T 29-03-2018 IPR001633 EAL domain AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 Gene3D G3DSA:3.40.190.10 165 251 1.6E-9 T 29-03-2018 AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.3E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 Gene3D G3DSA:3.40.190.10 74 164 0.0011 T 29-03-2018 AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 Pfam PF03466 LysR substrate binding domain 119 278 3.0E-14 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 SUPERFAMILY SSF53850 119 276 4.16E-28 T 29-03-2018 AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 SUPERFAMILY SSF46785 3 85 1.92E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19315 71f0c6854cc1f2ec8b8880ddde6ae272 289 Gene3D G3DSA:1.10.10.10 1 73 1.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24325 74ee319f935352386d80999e42797a9f 131 Pfam PF04892 VanZ like family 40 123 4.0E-9 T 29-03-2018 IPR006976 VanZ-like AL539_RS12250 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 SMART SM00079 24 244 0.0075 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL539_RS12250 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 Gene3D G3DSA:3.40.190.10 124 203 5.3E-19 T 29-03-2018 AL539_RS12250 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 1.1E-56 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS12250 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 SMART SM00062 24 245 1.3E-75 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS12250 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 SUPERFAMILY SSF53850 1 246 3.48E-59 T 29-03-2018 AL539_RS12250 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL539_RS12250 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 Gene3D G3DSA:3.40.190.10 15 123 1.3E-28 T 29-03-2018 AL539_RS23930 a419111737de2a9f98d0bf58cc3654c0 542 Gene3D G3DSA:1.10.287.950 79 309 2.3E-7 T 29-03-2018 AL539_RS23930 a419111737de2a9f98d0bf58cc3654c0 542 Gene3D G3DSA:1.10.287.950 310 513 2.5E-48 T 29-03-2018 AL539_RS23930 a419111737de2a9f98d0bf58cc3654c0 542 SUPERFAMILY SSF58104 233 542 9.02E-72 T 29-03-2018 AL539_RS23930 a419111737de2a9f98d0bf58cc3654c0 542 SMART SM00304 213 265 4.8E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS23930 a419111737de2a9f98d0bf58cc3654c0 542 SMART SM00283 280 541 3.2E-67 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS23930 a419111737de2a9f98d0bf58cc3654c0 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 508 4.8E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS23930 a419111737de2a9f98d0bf58cc3654c0 542 Pfam PF00672 HAMP domain 215 260 7.0E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS07480 a86863b3969fb4328ec71da6465e706c 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.2E-54 T 29-03-2018 IPR021318 Protein of unknown function DUF2919 AL539_RS18390 496705781e7a39609524368697dd7cf9 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 410 2.5E-29 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18390 496705781e7a39609524368697dd7cf9 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 407 1.2E-6 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18390 496705781e7a39609524368697dd7cf9 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 344 1.9E-22 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18390 496705781e7a39609524368697dd7cf9 412 SMART SM00267 227 412 5.5E-36 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18390 496705781e7a39609524368697dd7cf9 412 Gene3D G3DSA:3.30.70.270 232 412 1.4E-43 T 29-03-2018 AL539_RS18390 496705781e7a39609524368697dd7cf9 412 SUPERFAMILY SSF55073 243 410 1.96E-32 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS15130 06ab0d154a507d06e94cc9b2cda9fee9 278 Gene3D G3DSA:3.30.1380.10 19 278 6.9E-92 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL539_RS15130 06ab0d154a507d06e94cc9b2cda9fee9 278 PIRSF PIRSF018455 3 278 1.7E-109 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AL539_RS15130 06ab0d154a507d06e94cc9b2cda9fee9 278 Pfam PF03411 Penicillin-insensitive murein endopeptidase 35 275 1.6E-91 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AL539_RS15130 06ab0d154a507d06e94cc9b2cda9fee9 278 SUPERFAMILY SSF55166 20 277 1.06E-92 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL539_RS18870 0096d4894226ad6e46bae62b4ad5ac6d 242 Gene3D G3DSA:1.10.260.40 43 83 1.7E-10 T 29-03-2018 AL539_RS18870 0096d4894226ad6e46bae62b4ad5ac6d 242 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.6E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS18870 0096d4894226ad6e46bae62b4ad5ac6d 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS18870 0096d4894226ad6e46bae62b4ad5ac6d 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS18870 0096d4894226ad6e46bae62b4ad5ac6d 242 SUPERFAMILY SSF46689 9 86 2.98E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS18870 0096d4894226ad6e46bae62b4ad5ac6d 242 Gene3D G3DSA:1.10.10.60 1 42 9.6E-12 T 29-03-2018 AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 1.9E-34 T 29-03-2018 IPR001107 Band 7 domain AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 77 98 3.0E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 156 174 3.0E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 112 129 3.0E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 132 155 3.0E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 175 196 3.0E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 SUPERFAMILY SSF117892 53 187 8.5E-41 T 29-03-2018 IPR001107 Band 7 domain AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 29-03-2018 IPR018080 Band 7/stomatin-like, conserved site AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 Pfam PF16200 C-terminal region of band_7 242 303 3.9E-7 T 29-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 AL539_RS16585 81377fbaa0404c7b54740ad25f253b50 305 SMART SM00244 22 180 1.3E-58 T 29-03-2018 IPR001107 Band 7 domain AL539_RS25575 de7c38feb6a4a77e697bf8adacfc17f3 309 SUPERFAMILY SSF46785 10 116 2.84E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25575 de7c38feb6a4a77e697bf8adacfc17f3 309 Gene3D G3DSA:3.40.190.10 93 178 2.4E-9 T 29-03-2018 AL539_RS25575 de7c38feb6a4a77e697bf8adacfc17f3 309 SUPERFAMILY SSF53850 93 302 4.71E-35 T 29-03-2018 AL539_RS25575 de7c38feb6a4a77e697bf8adacfc17f3 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 9.0E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25575 de7c38feb6a4a77e697bf8adacfc17f3 309 Gene3D G3DSA:3.40.190.10 179 273 5.5E-19 T 29-03-2018 AL539_RS25575 de7c38feb6a4a77e697bf8adacfc17f3 309 Pfam PF03466 LysR substrate binding domain 93 301 1.0E-30 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS25575 de7c38feb6a4a77e697bf8adacfc17f3 309 Gene3D G3DSA:1.10.10.10 7 88 2.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 SUPERFAMILY SSF64518 5 378 3.53E-95 T 29-03-2018 AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 4.5E-24 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 Gene3D G3DSA:1.20.1330.10 44 342 4.1E-73 T 29-03-2018 AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 Pfam PF07196 Flagellin hook IN motif 194 243 1.5E-9 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-43 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 PRINTS PR00207 Flagellin signature 111 134 2.3E-26 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 PRINTS PR00207 Flagellin signature 37 54 2.3E-26 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS07470 5fde84a13dcb34a8ae2d93a2fb0ced83 379 PRINTS PR00207 Flagellin signature 76 95 2.3E-26 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS02870 501fc273853fa59687cb2ad96e0a1002 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 8.0E-161 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL539_RS02870 501fc273853fa59687cb2ad96e0a1002 313 SUPERFAMILY SSF52317 18 297 3.41E-101 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS02870 501fc273853fa59687cb2ad96e0a1002 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 3.6E-135 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL539_RS02870 501fc273853fa59687cb2ad96e0a1002 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.404 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL539_RS02870 501fc273853fa59687cb2ad96e0a1002 313 Gene3D G3DSA:3.40.50.880 34 301 2.8E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS02870 501fc273853fa59687cb2ad96e0a1002 313 PIRSF PIRSF000450 1 309 8.0E-148 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AL539_RS02870 501fc273853fa59687cb2ad96e0a1002 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 9.0E-128 T 29-03-2018 AL539_RS22460 0ffd85ef1e6d23a72852d4a1eae2d279 131 Gene3D G3DSA:3.90.1590.10 3 125 2.1E-21 T 29-03-2018 AL539_RS22460 0ffd85ef1e6d23a72852d4a1eae2d279 131 SUPERFAMILY SSF51316 11 130 3.24E-31 T 29-03-2018 IPR011057 Mss4-like AL539_RS22460 0ffd85ef1e6d23a72852d4a1eae2d279 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 115 1.4E-9 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 2.6E-121 T 29-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 1.4E-149 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.964 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 SUPERFAMILY SSF51726 396 757 3.79E-114 T 29-03-2018 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 Gene3D G3DSA:3.20.20.210 3 389 1.1E-138 T 29-03-2018 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 Gene3D G3DSA:3.20.20.210 390 759 7.2E-123 T 29-03-2018 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 SUPERFAMILY SSF51726 5 393 1.14E-109 T 29-03-2018 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL539_RS06050 4ad4c9082f9eedb86efdb958be2a7c88 760 PIRSF PIRSF000382 2 760 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL539_RS03870 398026b55d6ee9ac389e84abf0447d8f 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.734 T 29-03-2018 IPR007040 Ribosome modulation factor AL539_RS03870 398026b55d6ee9ac389e84abf0447d8f 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-22 T 29-03-2018 IPR007040 Ribosome modulation factor AL539_RS03870 398026b55d6ee9ac389e84abf0447d8f 57 Gene3D G3DSA:1.10.10.620 3 54 2.7E-25 T 29-03-2018 AL539_RS03870 398026b55d6ee9ac389e84abf0447d8f 57 Pfam PF04957 Ribosome modulation factor 1 54 3.3E-28 T 29-03-2018 IPR007040 Ribosome modulation factor AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SUPERFAMILY SSF55874 523 696 8.25E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SMART SM00388 469 534 1.2E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Gene3D G3DSA:1.20.120.160 874 987 5.6E-15 T 29-03-2018 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 PIRSF PIRSF036437 1 987 0.0 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SMART SM00073 888 985 5.7E-8 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Gene3D G3DSA:1.10.287.130 459 530 1.4E-18 T 29-03-2018 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Gene3D G3DSA:3.30.565.10 539 702 1.6E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Pfam PF01627 Hpt domain 900 981 3.1E-13 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SMART SM00387 581 694 1.9E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.4E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Pfam PF00072 Response regulator receiver domain 714 832 7.2E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SMART SM00448 712 832 1.1E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.2E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.2E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 2.2E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 2.2E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SUPERFAMILY SSF47384 457 535 6.28E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 983 0.0 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 5.5E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SUPERFAMILY SSF47226 876 985 8.51E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 Gene3D G3DSA:3.40.50.2300 709 873 1.8E-33 T 29-03-2018 AL539_RS19340 b50041220fe5d0f8690faf8921643345 987 SUPERFAMILY SSF52172 712 844 1.57E-32 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS09195 502dd700d1358e01dc9f0f74738880a0 297 Gene3D G3DSA:1.10.10.10 2 84 6.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09195 502dd700d1358e01dc9f0f74738880a0 297 SUPERFAMILY SSF46785 2 112 5.05E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09195 502dd700d1358e01dc9f0f74738880a0 297 Pfam PF03466 LysR substrate binding domain 88 290 7.2E-22 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS09195 502dd700d1358e01dc9f0f74738880a0 297 SUPERFAMILY SSF53850 87 293 2.17E-28 T 29-03-2018 AL539_RS09195 502dd700d1358e01dc9f0f74738880a0 297 Gene3D G3DSA:3.40.190.10 93 173 3.1E-9 T 29-03-2018 AL539_RS09195 502dd700d1358e01dc9f0f74738880a0 297 Gene3D G3DSA:3.40.190.10 174 263 1.3E-14 T 29-03-2018 AL539_RS09195 502dd700d1358e01dc9f0f74738880a0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.6E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 Gene3D G3DSA:3.40.50.300 1 224 8.7E-61 T 29-03-2018 AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 Pfam PF00270 DEAD/DEAH box helicase 26 194 6.6E-48 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 Gene3D G3DSA:3.40.50.300 225 478 1.9E-45 T 29-03-2018 AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 SUPERFAMILY SSF52540 73 359 3.23E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 499 51.1 T 29-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 SMART SM00490 257 338 6.7E-32 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.0E-26 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS20905 bf291307edcf10a3b951d9ed9a190a12 522 SMART SM00487 20 221 2.4E-63 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS08300 c83218e0bde0f64b1186784b27937700 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 9.5E-81 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL539_RS08300 c83218e0bde0f64b1186784b27937700 258 SUPERFAMILY SSF51569 6 245 6.38E-83 T 29-03-2018 AL539_RS08300 c83218e0bde0f64b1186784b27937700 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.781 T 29-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AL539_RS08300 c83218e0bde0f64b1186784b27937700 258 SMART SM01133 10 244 3.3E-79 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL539_RS08300 c83218e0bde0f64b1186784b27937700 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 3.9E-48 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL539_RS08300 c83218e0bde0f64b1186784b27937700 258 Gene3D G3DSA:3.20.20.70 1 255 2.3E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS08300 c83218e0bde0f64b1186784b27937700 258 PIRSF PIRSF001357 5 251 8.5E-77 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 Gene3D G3DSA:2.60.300.12 2 100 8.7E-18 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.957 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 1.2E-96 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 6.0E-27 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 Pfam PF01106 NifU-like domain 113 179 3.6E-19 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 SUPERFAMILY SSF89360 3 99 2.94E-22 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 Gene3D G3DSA:3.30.300.130 104 190 2.9E-25 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 SUPERFAMILY SSF117916 97 187 5.01E-23 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AL539_RS12955 53a8040c44eb4d90be1d91f18401691f 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 101 9.3E-13 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS03260 4196b56e912a034608eb2143dfd2b3b5 176 Gene3D G3DSA:3.30.420.10 1 176 1.6E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS03260 4196b56e912a034608eb2143dfd2b3b5 176 SMART SM00479 5 176 4.9E-5 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS03260 4196b56e912a034608eb2143dfd2b3b5 176 SUPERFAMILY SSF53098 4 175 2.28E-29 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS03260 4196b56e912a034608eb2143dfd2b3b5 176 Pfam PF00929 Exonuclease 7 171 1.1E-12 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 Gene3D G3DSA:3.40.640.10 177 300 4.4E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 Gene3D G3DSA:3.90.1150.10 3 165 1.1E-33 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 Pfam PF00202 Aminotransferase class-III 15 409 7.1E-80 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 Gene3D G3DSA:3.90.1150.10 301 416 5.4E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 SUPERFAMILY SSF53383 7 410 1.2E-102 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 PIRSF PIRSF000521 2 128 3.1E-5 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 PIRSF PIRSF000521 174 412 2.1E-31 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 PIRSF PIRSF000521 122 154 6.6 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 3.1E-149 T 29-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AL539_RS02970 5833243a0c5413df91deb8fd32e0eb26 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 8.2E-206 T 29-03-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AL539_RS21450 f4d3e21f59f9e06a7d4e168d33bbdb60 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS21450 f4d3e21f59f9e06a7d4e168d33bbdb60 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.0E-45 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS21450 f4d3e21f59f9e06a7d4e168d33bbdb60 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 2.2E-32 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS21450 f4d3e21f59f9e06a7d4e168d33bbdb60 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL539_RS21450 f4d3e21f59f9e06a7d4e168d33bbdb60 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 9.1E-118 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AL539_RS21450 f4d3e21f59f9e06a7d4e168d33bbdb60 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 1.5E-26 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS21450 f4d3e21f59f9e06a7d4e168d33bbdb60 261 SUPERFAMILY SSF117143 93 222 4.18E-36 T 29-03-2018 AL539_RS06835 a384f5762477af838297727165ac688f 75 Gene3D G3DSA:1.10.3390.10 2 71 2.5E-31 T 29-03-2018 IPR023202 YejL-like domain AL539_RS06835 a384f5762477af838297727165ac688f 75 SUPERFAMILY SSF158651 1 75 2.88E-29 T 29-03-2018 IPR023202 YejL-like domain AL539_RS06835 a384f5762477af838297727165ac688f 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.3E-20 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL539_RS06835 a384f5762477af838297727165ac688f 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-31 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL539_RS06835 a384f5762477af838297727165ac688f 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.597 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL539_RS06835 a384f5762477af838297727165ac688f 75 PIRSF PIRSF006188 1 72 2.6E-37 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 Gene3D G3DSA:1.10.10.60 204 263 4.3E-11 T 29-03-2018 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 Gene3D G3DSA:1.10.10.60 264 316 9.3E-10 T 29-03-2018 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 SUPERFAMILY SSF46689 261 311 3.58E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 306 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 3.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 3.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 Pfam PF12833 Helix-turn-helix domain 231 311 6.6E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS21345 cf2b08d176a9b17f0c7437c4326a4950 316 SMART SM00342 225 310 2.5E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS15730 5aec3509ca55fe3830b6c6a767a01af7 160 SUPERFAMILY SSF55729 1 150 1.18E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS15730 5aec3509ca55fe3830b6c6a767a01af7 160 Pfam PF00583 Acetyltransferase (GNAT) family 31 136 1.3E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS15730 5aec3509ca55fe3830b6c6a767a01af7 160 Gene3D G3DSA:3.40.630.30 1 160 2.3E-23 T 29-03-2018 AL539_RS18510 a3134e5decd84d68210e9890e758c470 295 Pfam PF03466 LysR substrate binding domain 122 291 8.3E-15 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS18510 a3134e5decd84d68210e9890e758c470 295 Gene3D G3DSA:3.40.190.10 96 176 3.2E-4 T 29-03-2018 AL539_RS18510 a3134e5decd84d68210e9890e758c470 295 SUPERFAMILY SSF46785 6 86 1.22E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18510 a3134e5decd84d68210e9890e758c470 295 SUPERFAMILY SSF53850 97 289 9.59E-20 T 29-03-2018 AL539_RS18510 a3134e5decd84d68210e9890e758c470 295 Gene3D G3DSA:3.40.190.10 177 261 2.2E-6 T 29-03-2018 AL539_RS18510 a3134e5decd84d68210e9890e758c470 295 Gene3D G3DSA:1.10.10.10 1 87 3.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18510 a3134e5decd84d68210e9890e758c470 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 PIRSF PIRSF003180 1 403 2.2E-169 T 29-03-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 Gene3D G3DSA:3.20.20.450 4 192 1.5E-21 T 29-03-2018 IPR001633 EAL domain AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 SUPERFAMILY SSF109604 181 400 4.71E-43 T 29-03-2018 AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 SUPERFAMILY SSF141868 5 193 2.48E-28 T 29-03-2018 IPR001633 EAL domain AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 Pfam PF08668 HDOD domain 205 325 1.1E-12 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 Gene3D G3DSA:1.10.3210.10 193 373 1.4E-15 T 29-03-2018 AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 SMART SM00052 2 195 9.8E-4 T 29-03-2018 IPR001633 EAL domain AL539_RS01665 f906368f501c8dba81f1f0bbcfcc485f 404 Pfam PF00563 EAL domain 64 190 3.8E-15 T 29-03-2018 IPR001633 EAL domain AL539_RS25965 faf142d95a142a1868ec8ff54bbbee1b 309 SUPERFAMILY SSF55136 161 304 1.15E-16 T 29-03-2018 AL539_RS25965 faf142d95a142a1868ec8ff54bbbee1b 309 Gene3D G3DSA:3.30.530.20 2 152 5.4E-15 T 29-03-2018 IPR023393 START-like domain AL539_RS25965 faf142d95a142a1868ec8ff54bbbee1b 309 Gene3D G3DSA:3.20.80.10 156 306 1.5E-25 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AL539_RS25965 faf142d95a142a1868ec8ff54bbbee1b 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 147 3.4E-19 T 29-03-2018 IPR019587 Polyketide cyclase/dehydrase AL539_RS25965 faf142d95a142a1868ec8ff54bbbee1b 309 SMART SM00871 156 309 2.4E-8 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AL539_RS25965 faf142d95a142a1868ec8ff54bbbee1b 309 Pfam PF06445 GyrI-like small molecule binding domain 161 306 6.6E-17 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain AL539_RS25965 faf142d95a142a1868ec8ff54bbbee1b 309 SUPERFAMILY SSF55961 5 146 1.44E-14 T 29-03-2018 AL539_RS09140 d8e9bd6054f7716089236b2598c15227 218 Gene3D G3DSA:3.40.50.1360 1 137 1.7E-40 T 29-03-2018 AL539_RS09140 d8e9bd6054f7716089236b2598c15227 218 SUPERFAMILY SSF75445 127 198 6.8E-24 T 29-03-2018 AL539_RS09140 d8e9bd6054f7716089236b2598c15227 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.4E-58 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS09140 d8e9bd6054f7716089236b2598c15227 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 8.9E-69 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS09140 d8e9bd6054f7716089236b2598c15227 218 Gene3D G3DSA:3.30.70.260 138 196 3.3E-24 T 29-03-2018 AL539_RS09140 d8e9bd6054f7716089236b2598c15227 218 SUPERFAMILY SSF100950 1 146 7.91E-47 T 29-03-2018 AL539_RS09140 d8e9bd6054f7716089236b2598c15227 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.391 T 29-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL539_RS14155 bc6d0740d5102764b22841f7b62bb655 176 Pfam PF05068 Mannitol repressor 7 170 1.3E-61 T 29-03-2018 IPR007761 Mannitol repressor MtlR-like AL539_RS14155 bc6d0740d5102764b22841f7b62bb655 176 SUPERFAMILY SSF158668 4 170 2.62E-58 T 29-03-2018 AL539_RS14155 bc6d0740d5102764b22841f7b62bb655 176 Gene3D G3DSA:1.20.120.330 5 170 1.6E-62 T 29-03-2018 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 Gene3D G3DSA:3.10.290.10 1 63 2.0E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 Pfam PF00849 RNA pseudouridylate synthase 68 185 5.6E-17 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 Gene3D G3DSA:3.30.70.1560 149 218 6.3E-18 T 29-03-2018 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 SUPERFAMILY SSF55174 4 96 6.56E-12 T 29-03-2018 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 SMART SM00363 3 61 8.0E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 SUPERFAMILY SSF55120 68 237 1.3E-42 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 Gene3D G3DSA:3.30.70.580 64 148 3.7E-19 T 29-03-2018 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS05940 2db352ed6d0149d2eebe622fa9653e84 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 7.2E-55 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 Pfam PF08029 HisG, C-terminal domain 222 295 4.6E-24 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 4.1E-30 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 Gene3D G3DSA:3.40.190.10 112 191 3.1E-28 T 29-03-2018 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 2.4E-54 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 Gene3D G3DSA:3.30.70.120 226 297 2.7E-24 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 SUPERFAMILY SSF54913 225 297 5.11E-21 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 Gene3D G3DSA:3.40.190.10 1 111 2.1E-26 T 29-03-2018 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.167 T 29-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 SUPERFAMILY SSF53850 5 222 8.87E-66 T 29-03-2018 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.1E-43 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL539_RS01620 407a4f03d03242fa2df9188daca955d0 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 29-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AL539_RS06455 05725418cebec0ecd2bb7a5e3fc8da79 193 Gene3D G3DSA:3.90.950.10 1 187 3.2E-53 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS06455 05725418cebec0ecd2bb7a5e3fc8da79 193 PIRSF PIRSF006305 1 192 2.9E-42 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS06455 05725418cebec0ecd2bb7a5e3fc8da79 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 28.694 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS06455 05725418cebec0ecd2bb7a5e3fc8da79 193 Pfam PF02545 Maf-like protein 5 186 7.9E-44 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS06455 05725418cebec0ecd2bb7a5e3fc8da79 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 7.4E-51 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS06455 05725418cebec0ecd2bb7a5e3fc8da79 193 SUPERFAMILY SSF52972 1 185 7.85E-58 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 505 546 8.9E-4 T 29-03-2018 IPR006530 YD repeat AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 955 991 2.1E-6 T 29-03-2018 IPR006530 YD repeat AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 845 884 0.0013 T 29-03-2018 IPR006530 YD repeat AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 463 501 1.7E-5 T 29-03-2018 IPR006530 YD repeat AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 421 451 9.7E-6 T 29-03-2018 IPR006530 YD repeat AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 PRINTS PR00394 RHS protein signature 1099 1118 1.4E-10 T 29-03-2018 IPR001826 RHS protein AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 PRINTS PR00394 RHS protein signature 1023 1043 1.4E-10 T 29-03-2018 IPR001826 RHS protein AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 PRINTS PR00394 RHS protein signature 1076 1096 1.4E-10 T 29-03-2018 IPR001826 RHS protein AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1057 1130 4.2E-27 T 29-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 Pfam PF03527 RHS protein 1029 1062 9.0E-13 T 29-03-2018 IPR001826 RHS protein AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 Pfam PF05593 RHS Repeat 886 913 8.3E-5 T 29-03-2018 IPR031325 RHS repeat AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 Pfam PF05593 RHS Repeat 422 458 6.9E-8 T 29-03-2018 IPR031325 RHS repeat AL539_RS03590 24fce892780d4b95bce7c5e7fac3d8c0 1465 Pfam PF05593 RHS Repeat 954 986 5.1E-5 T 29-03-2018 IPR031325 RHS repeat AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 Pfam PF00005 ABC transporter 17 178 9.1E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 Pfam PF00005 ABC transporter 328 459 4.5E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 Gene3D G3DSA:3.40.50.300 2 279 9.0E-50 T 29-03-2018 AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 SUPERFAMILY SSF52540 119 258 1.78E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 SUPERFAMILY SSF52540 2 92 1.78E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 Gene3D G3DSA:3.40.50.300 308 633 4.1E-49 T 29-03-2018 AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 SUPERFAMILY SSF52540 276 494 1.85E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 Pfam PF12848 ABC transporter 217 295 2.6E-27 T 29-03-2018 IPR032781 ABC-transporter extension domain AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 SMART SM00382 337 503 9.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS10490 820d039677b8ad8f2a39aabf9518e728 639 SMART SM00382 26 223 1.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS04870 ee3c5c7232721f777f6937a9d64a16d6 111 Gene3D G3DSA:2.20.25.10 2 39 5.6E-13 T 29-03-2018 AL539_RS04870 ee3c5c7232721f777f6937a9d64a16d6 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 3.2E-40 T 29-03-2018 IPR004624 PhnA protein AL539_RS04870 ee3c5c7232721f777f6937a9d64a16d6 111 Pfam PF03831 PhnA domain 43 111 1.8E-26 T 29-03-2018 IPR013988 PhnA protein, C-terminal AL539_RS04870 ee3c5c7232721f777f6937a9d64a16d6 111 Gene3D G3DSA:2.30.30.40 42 110 1.8E-26 T 29-03-2018 AL539_RS04870 ee3c5c7232721f777f6937a9d64a16d6 111 SUPERFAMILY SSF82057 39 111 2.7E-23 T 29-03-2018 AL539_RS04870 ee3c5c7232721f777f6937a9d64a16d6 111 SUPERFAMILY SSF57783 2 37 7.37E-13 T 29-03-2018 AL539_RS04870 ee3c5c7232721f777f6937a9d64a16d6 111 Pfam PF08274 PhnA Zinc-Ribbon 3 30 5.7E-13 T 29-03-2018 IPR013987 PhnA protein, N-terminal AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 8.1E-36 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 6.6E-127 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 SUPERFAMILY SSF53901 14 293 1.1E-60 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 Gene3D G3DSA:3.40.47.10 11 289 1.7E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 1.3E-63 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 4.9E-267 T 29-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 Gene3D G3DSA:3.40.47.10 290 432 1.1E-23 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 SUPERFAMILY SSF53901 296 434 1.33E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS07160 2d6d94ee42c9d084968ac4dd0b86b185 435 PIRSF PIRSF000429 8 435 9.2E-120 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AL539_RS04415 74f00c9eb85f78258aa8902fe92b3cc0 153 Pfam PF07321 Type III secretion protein YscO 2 149 5.2E-40 T 29-03-2018 IPR009929 Type III secretion sytem,YscO AL539_RS26075 841943a813f69b060f266385e29a01b3 191 Gene3D G3DSA:1.10.10.60 1 58 1.1E-11 T 29-03-2018 AL539_RS26075 841943a813f69b060f266385e29a01b3 191 SUPERFAMILY SSF48498 83 174 1.97E-13 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS26075 841943a813f69b060f266385e29a01b3 191 SUPERFAMILY SSF46689 2 65 2.82E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS26075 841943a813f69b060f266385e29a01b3 191 Gene3D G3DSA:1.10.357.10 59 190 6.3E-16 T 29-03-2018 AL539_RS26075 841943a813f69b060f266385e29a01b3 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 Pfam PF00005 ABC transporter 21 170 4.7E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 Pfam PF00005 ABC transporter 270 423 1.1E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 SMART SM00382 30 219 3.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 SMART SM00382 278 472 6.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 Gene3D G3DSA:3.40.50.300 1 233 8.3E-52 T 29-03-2018 AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 SUPERFAMILY SSF52540 269 480 1.03E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 SUPERFAMILY SSF52540 5 228 3.22E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 Gene3D G3DSA:3.40.50.300 265 487 1.3E-41 T 29-03-2018 AL539_RS19470 c1839d2186f1e5e9e7fb8c8973b1eac9 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 Gene3D G3DSA:3.40.605.10 238 416 7.0E-31 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.139 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 Gene3D G3DSA:3.40.605.10 1 237 4.6E-41 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 29-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 SUPERFAMILY SSF53720 3 408 9.82E-111 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 PIRSF PIRSF000151 1 416 8.0E-165 T 29-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 8.5E-166 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL539_RS15875 d449ea12b050f7bdf0517a629a6df041 416 Pfam PF00171 Aldehyde dehydrogenase family 5 279 1.3E-14 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.9E-80 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.9E-80 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.9E-80 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.9E-80 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.9E-80 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.9E-80 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.9E-80 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 4.6E-28 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:3.20.20.60 2 154 5.4E-38 T 29-03-2018 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:3.20.20.60 155 321 2.1E-69 T 29-03-2018 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:3.40.1380.20 322 470 2.3E-44 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF50800 70 167 1.59E-29 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF51621 1 74 6.98E-103 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF51621 156 339 6.98E-103 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.5E-155 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF52935 323 469 7.06E-34 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS14065 9d78a1d8864b4b0c735f1aba430eb7d0 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.9E-189 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS22695 ab63583f18c227403c39381b80edf771 303 Gene3D G3DSA:3.40.190.10 177 269 6.4E-16 T 29-03-2018 AL539_RS22695 ab63583f18c227403c39381b80edf771 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 64 8.4E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22695 ab63583f18c227403c39381b80edf771 303 Pfam PF03466 LysR substrate binding domain 91 297 4.0E-34 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS22695 ab63583f18c227403c39381b80edf771 303 Gene3D G3DSA:3.40.190.10 90 176 2.1E-13 T 29-03-2018 AL539_RS22695 ab63583f18c227403c39381b80edf771 303 SUPERFAMILY SSF53850 91 299 6.83E-36 T 29-03-2018 AL539_RS22695 ab63583f18c227403c39381b80edf771 303 Gene3D G3DSA:1.10.10.10 1 86 9.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22695 ab63583f18c227403c39381b80edf771 303 SUPERFAMILY SSF46785 10 112 2.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01440 311dfeef9035a9578b74e4ff80ace1d7 543 SMART SM00857 9 169 1.5E-18 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS01440 311dfeef9035a9578b74e4ff80ace1d7 543 Pfam PF00239 Resolvase, N terminal domain 9 154 3.6E-15 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS01440 311dfeef9035a9578b74e4ff80ace1d7 543 Pfam PF13408 Recombinase zinc beta ribbon domain 282 322 3.8E-8 T 29-03-2018 IPR025827 Recombinase zinc beta ribbon domain AL539_RS01440 311dfeef9035a9578b74e4ff80ace1d7 543 SUPERFAMILY SSF53041 9 162 1.7E-15 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS01440 311dfeef9035a9578b74e4ff80ace1d7 543 Pfam PF07508 Recombinase 193 260 1.3E-4 T 29-03-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 AL539_RS01440 311dfeef9035a9578b74e4ff80ace1d7 543 Gene3D G3DSA:3.40.50.1390 3 179 1.7E-23 T 29-03-2018 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 Gene3D G3DSA:3.20.20.10 44 256 4.9E-35 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 SMART SM01005 280 408 1.6E-49 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 SUPERFAMILY SSF50621 273 408 2.3E-40 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 TIGRFAM TIGR00492 alr: alanine racemase 45 408 1.8E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 Gene3D G3DSA:2.40.37.10 257 409 1.3E-51 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 272 4.8E-52 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 Pfam PF00842 Alanine racemase, C-terminal domain 281 407 7.2E-33 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 SUPERFAMILY SSF51419 49 283 6.67E-49 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 PRINTS PR00992 Alanine racemase signature 313 328 1.3E-30 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 PRINTS PR00992 Alanine racemase signature 166 178 1.3E-30 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 PRINTS PR00992 Alanine racemase signature 68 84 1.3E-30 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 PRINTS PR00992 Alanine racemase signature 334 351 1.3E-30 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 PRINTS PR00992 Alanine racemase signature 202 213 1.3E-30 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 PRINTS PR00992 Alanine racemase signature 104 122 1.3E-30 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 PRINTS PR00992 Alanine racemase signature 245 272 1.3E-30 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS18045 405bdd96c1cedcae7e3add3c5b91a9bf 409 Hamap MF_01201 Alanine racemase. 42 408 26.443 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 SUPERFAMILY SSF51735 4 160 1.42E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 Gene3D G3DSA:1.10.3730.10 165 272 1.8E-31 T 29-03-2018 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.3E-72 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 SUPERFAMILY SSF48179 163 270 4.93E-30 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 PIRSF PIRSF000193 3 270 3.8E-76 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 5.4E-30 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 3.1E-25 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 Gene3D G3DSA:3.40.50.720 1 164 1.0E-26 T 29-03-2018 AL539_RS09265 1c85a31adeb9e830446bebbf7de031bc 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.46 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 Gene3D G3DSA:3.40.50.300 289 560 4.3E-59 T 29-03-2018 AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 Gene3D G3DSA:3.30.450.90 150 288 5.7E-45 T 29-03-2018 AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 2.2E-237 T 29-03-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 Pfam PF00437 Type II/IV secretion system protein 188 455 4.7E-87 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 142 6.4E-16 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 SUPERFAMILY SSF52540 173 558 8.5E-92 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08740 c63f612f291e75148e20334bcb3a2d5e 561 SUPERFAMILY SSF160246 2 140 4.45E-31 T 29-03-2018 AL539_RS08215 eab6f8d2375f89bd6573b3a99ed2e097 214 SMART SM00421 147 204 1.3E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS08215 eab6f8d2375f89bd6573b3a99ed2e097 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.2E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS08215 eab6f8d2375f89bd6573b3a99ed2e097 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.2E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS08215 eab6f8d2375f89bd6573b3a99ed2e097 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.2E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS08215 eab6f8d2375f89bd6573b3a99ed2e097 214 SUPERFAMILY SSF46894 134 207 1.6E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS08215 eab6f8d2375f89bd6573b3a99ed2e097 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.3E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS08215 eab6f8d2375f89bd6573b3a99ed2e097 214 Gene3D G3DSA:1.10.10.10 112 214 4.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS00330 5bbc41bf90c9252675ae860af3f40910 317 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 33 304 5.9E-32 T 29-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 Pfam PF08245 Mur ligase middle domain 105 295 5.3E-48 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 SUPERFAMILY SSF53623 100 313 1.07E-54 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 Gene3D G3DSA:3.90.190.20 316 454 4.9E-37 T 29-03-2018 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 6.8E-12 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.678 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 SUPERFAMILY SSF63418 1 96 4.45E-26 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 Pfam PF01225 Mur ligase family, catalytic domain 24 91 1.2E-7 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 5.2E-142 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 Gene3D G3DSA:3.40.1190.10 90 312 2.3E-55 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 Gene3D G3DSA:3.40.1390.10 1 89 1.4E-26 T 29-03-2018 AL539_RS14560 9210d095993e2b0df622f4309686f1b4 454 SUPERFAMILY SSF53244 316 450 2.75E-34 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 3.2E-168 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.3E-26 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 Gene3D G3DSA:3.20.20.10 35 264 5.5E-58 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 SUPERFAMILY SSF51419 27 284 1.45E-83 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 Gene3D G3DSA:2.40.37.10 265 417 2.3E-48 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 SUPERFAMILY SSF50621 261 414 1.03E-52 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.0E-71 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.456 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 7.7E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 7.7E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 7.7E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS11585 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 7.7E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS17725 d033ffa354644e154f0a4b249bd4e040 322 Gene3D G3DSA:3.30.1490.20 36 144 1.7E-7 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS17725 d033ffa354644e154f0a4b249bd4e040 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 320 1.0E-175 T 29-03-2018 IPR011758 Alpha-L-glutamate ligase-related protein AL539_RS17725 d033ffa354644e154f0a4b249bd4e040 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 294 2.8E-113 T 29-03-2018 AL539_RS17725 d033ffa354644e154f0a4b249bd4e040 322 SUPERFAMILY SSF56059 36 186 1.21E-19 T 29-03-2018 AL539_RS17725 d033ffa354644e154f0a4b249bd4e040 322 SUPERFAMILY SSF56059 220 277 1.21E-19 T 29-03-2018 AL539_RS17725 d033ffa354644e154f0a4b249bd4e040 322 Gene3D G3DSA:3.30.470.20 145 286 1.4E-19 T 29-03-2018 AL539_RS24795 6b2d968219bd2ac359700a8039c5ddd4 572 Pfam PF11604 Copper binding periplasmic protein CusF 499 563 1.0E-18 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF AL539_RS24795 6b2d968219bd2ac359700a8039c5ddd4 572 Pfam PF11604 Copper binding periplasmic protein CusF 419 484 5.6E-22 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF AL539_RS24795 6b2d968219bd2ac359700a8039c5ddd4 572 Gene3D G3DSA:2.40.50.100 126 251 2.8E-14 T 29-03-2018 AL539_RS24795 6b2d968219bd2ac359700a8039c5ddd4 572 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 209 392 1.4E-36 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS24795 6b2d968219bd2ac359700a8039c5ddd4 572 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 319 7.4E-79 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS24795 6b2d968219bd2ac359700a8039c5ddd4 572 SUPERFAMILY SSF111369 133 324 9.15E-18 T 29-03-2018 AL539_RS16850 7f80945dc218c75c56131b1aaa03df41 142 Pfam PF01230 HIT domain 11 99 3.1E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AL539_RS16850 7f80945dc218c75c56131b1aaa03df41 142 Gene3D G3DSA:3.30.428.10 1 136 5.2E-25 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AL539_RS16850 7f80945dc218c75c56131b1aaa03df41 142 PIRSF PIRSF000714 2 141 1.1E-53 T 29-03-2018 IPR026026 Histidine triad hydrolase, Hint-type AL539_RS16850 7f80945dc218c75c56131b1aaa03df41 142 SUPERFAMILY SSF54197 3 133 6.17E-35 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 Pfam PF04552 Sigma-54, DNA binding domain 329 487 3.8E-72 T 29-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 467 474 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 PRINTS PR00045 Sigma-54 factor signature 200 217 7.7E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 PRINTS PR00045 Sigma-54 factor signature 388 400 7.7E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 PRINTS PR00045 Sigma-54 factor signature 404 415 7.7E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 PRINTS PR00045 Sigma-54 factor signature 462 480 7.7E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 486 1.9E-157 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 PIRSF PIRSF000774 1 489 1.4E-151 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 376 395 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 Pfam PF04963 Sigma-54 factor, core binding domain 128 317 7.8E-61 T 29-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AL539_RS09940 7c53b331746d09496e5a41922c8dda36 489 Gene3D G3DSA:1.10.10.10 335 422 1.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08835 8b5fb88f3e610090ddf6052966a2c473 376 PIRSF PIRSF015658 1 376 4.3E-178 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL539_RS08835 8b5fb88f3e610090ddf6052966a2c473 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 2.0E-158 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL539_RS08835 8b5fb88f3e610090ddf6052966a2c473 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 5.6E-169 T 29-03-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL539_RS20690 9154427874a7f570927e486c005e746b 96 SUPERFAMILY SSF81296 11 93 2.1E-13 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS20690 9154427874a7f570927e486c005e746b 96 Gene3D G3DSA:2.60.40.10 4 96 7.1E-17 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS02260 5a037acf5259efd788b1328a0a7e5313 325 Gene3D G3DSA:2.40.160.10 56 143 0.031 T 29-03-2018 AL539_RS02260 5a037acf5259efd788b1328a0a7e5313 325 Gene3D G3DSA:2.40.160.10 144 324 0.0055 T 29-03-2018 AL539_RS02260 5a037acf5259efd788b1328a0a7e5313 325 Pfam PF11383 Protein of unknown function (DUF3187) 10 322 3.0E-121 T 29-03-2018 IPR021523 Protein of unknown function DUF3187 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Gene3D G3DSA:3.20.20.70 454 800 4.2E-95 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 SUPERFAMILY SSF56235 21 447 7.72E-153 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Gene3D G3DSA:3.20.20.70 801 1240 6.6E-159 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 SUPERFAMILY SSF51395 452 1221 7.33E-268 T 29-03-2018 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Gene3D G3DSA:3.60.20.10 21 453 2.2E-154 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 SUPERFAMILY SSF69336 1235 1498 3.14E-95 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Pfam PF01645 Conserved region in glutamate synthase 817 1187 8.2E-151 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Pfam PF04898 Glutamate synthase central domain 472 756 9.0E-117 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.7E-185 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Pfam PF01493 GXGXG motif 1267 1452 1.5E-83 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL539_RS14700 199e6029a9a5d9de3775dc9082e066d5 1516 Gene3D G3DSA:2.160.20.60 1242 1514 4.4E-109 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL539_RS10010 2451864af326c4dd523edde35e154f42 273 SUPERFAMILY SSF56317 3 263 9.42E-80 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS10010 2451864af326c4dd523edde35e154f42 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AL539_RS10010 2451864af326c4dd523edde35e154f42 273 Gene3D G3DSA:3.60.110.10 2 269 3.1E-75 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS10010 2451864af326c4dd523edde35e154f42 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 2.2E-54 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS20635 167a119651adf5fb0472d1da643b5f6b 212 Pfam PF01966 HD domain 28 129 7.1E-14 T 29-03-2018 IPR006674 HD domain AL539_RS20635 167a119651adf5fb0472d1da643b5f6b 212 Gene3D G3DSA:1.10.3210.10 2 212 5.3E-24 T 29-03-2018 AL539_RS20635 167a119651adf5fb0472d1da643b5f6b 212 SUPERFAMILY SSF109604 9 210 9.11E-63 T 29-03-2018 AL539_RS20635 167a119651adf5fb0472d1da643b5f6b 212 SMART SM00471 22 139 4.1E-6 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 Gene3D G3DSA:3.40.50.2300 175 306 7.3E-34 T 29-03-2018 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 Pfam PF13377 Periplasmic binding protein-like domain 170 328 2.8E-26 T 29-03-2018 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 SUPERFAMILY SSF53822 58 316 5.97E-59 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 SMART SM00354 1 71 3.6E-38 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.2E-20 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 SUPERFAMILY SSF47413 1 60 6.22E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 Gene3D G3DSA:3.40.50.2300 56 174 1.4E-25 T 29-03-2018 AL539_RS20810 715536439c26a2b77ffcc7b5521ee96b 328 Gene3D G3DSA:1.10.260.40 3 55 2.0E-22 T 29-03-2018 AL539_RS24340 4416dd8a44c769e777f3e8b2b25a1889 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 7.3E-58 T 29-03-2018 IPR018831 Uncharacterised protein family NKWYS AL539_RS24340 4416dd8a44c769e777f3e8b2b25a1889 277 SUPERFAMILY SSF52540 18 246 3.11E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24340 4416dd8a44c769e777f3e8b2b25a1889 277 Gene3D G3DSA:3.40.50.300 3 263 3.9E-5 T 29-03-2018 AL539_RS20280 5ab62707a5644a64c1e03a003096104e 392 Gene3D G3DSA:1.20.1250.20 3 196 1.5E-17 T 29-03-2018 AL539_RS20280 5ab62707a5644a64c1e03a003096104e 392 Gene3D G3DSA:1.20.1250.20 197 387 4.3E-22 T 29-03-2018 AL539_RS20280 5ab62707a5644a64c1e03a003096104e 392 Pfam PF07690 Major Facilitator Superfamily 11 243 7.1E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS20280 5ab62707a5644a64c1e03a003096104e 392 Pfam PF07690 Major Facilitator Superfamily 254 386 1.8E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS20280 5ab62707a5644a64c1e03a003096104e 392 SUPERFAMILY SSF103473 4 383 1.26E-44 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS20840 dd54c7358595c87abe70ec63253a4715 314 Gene3D G3DSA:3.40.50.1980 193 308 1.9E-10 T 29-03-2018 AL539_RS20840 dd54c7358595c87abe70ec63253a4715 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 56 306 6.5E-23 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL539_RS20840 dd54c7358595c87abe70ec63253a4715 314 SUPERFAMILY SSF53807 27 306 5.4E-50 T 29-03-2018 AL539_RS20840 dd54c7358595c87abe70ec63253a4715 314 Gene3D G3DSA:3.40.50.1980 36 192 5.8E-22 T 29-03-2018 AL539_RS20840 dd54c7358595c87abe70ec63253a4715 314 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 126 134 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 Gene3D G3DSA:3.20.20.60 1 85 2.7E-15 T 29-03-2018 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 SUPERFAMILY SSF52935 329 479 8.11E-38 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 Gene3D G3DSA:2.40.33.10 86 170 6.8E-24 T 29-03-2018 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 3.3E-167 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 SUPERFAMILY SSF51621 171 344 7.68E-86 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 SUPERFAMILY SSF51621 4 79 7.68E-86 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 Gene3D G3DSA:3.20.20.60 171 327 1.3E-53 T 29-03-2018 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.4E-53 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.4E-53 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.4E-53 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.4E-53 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.4E-53 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.4E-53 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.4E-53 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 Gene3D G3DSA:3.40.1380.20 328 480 1.5E-42 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 SUPERFAMILY SSF50800 74 169 2.62E-26 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 4.6E-129 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.4E-29 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS06350 e52a343e978d8450f5cd5c5ac740a4c6 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.1E-130 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 35.637 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 Pfam PF01039 Carboxyl transferase domain 99 242 3.3E-14 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 SUPERFAMILY SSF52096 25 284 6.63E-81 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 Gene3D G3DSA:3.90.226.10 14 286 1.3E-64 T 29-03-2018 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-34 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-34 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-34 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-34 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS24670 c7f9b7305928ecaca22e51358c9a2c65 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-34 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS20920 17644a5b4586fe263986014bece94b82 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20920 17644a5b4586fe263986014bece94b82 311 SUPERFAMILY SSF46785 4 111 1.08E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20920 17644a5b4586fe263986014bece94b82 311 Gene3D G3DSA:1.10.10.10 3 86 6.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20920 17644a5b4586fe263986014bece94b82 311 SUPERFAMILY SSF53850 88 304 6.03E-40 T 29-03-2018 AL539_RS20920 17644a5b4586fe263986014bece94b82 311 Gene3D G3DSA:3.40.190.10 176 264 8.4E-24 T 29-03-2018 AL539_RS20920 17644a5b4586fe263986014bece94b82 311 Pfam PF03466 LysR substrate binding domain 89 301 1.0E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS20920 17644a5b4586fe263986014bece94b82 311 Gene3D G3DSA:3.40.190.10 92 175 2.9E-9 T 29-03-2018 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:1.10.1670.10 124 230 4.1E-32 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 SMART SM00478 44 195 4.8E-42 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 SUPERFAMILY SSF48150 9 230 4.24E-72 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 Pfam PF14815 NUDIX domain 241 334 6.9E-18 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 272 2.7E-101 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 171 1.3E-20 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 SUPERFAMILY SSF55811 225 336 2.84E-20 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:1.10.340.30 26 123 5.5E-35 T 29-03-2018 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 Pfam PF00633 Helix-hairpin-helix motif 108 133 3.0E-6 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:3.90.79.10 277 343 0.3 T 29-03-2018 AL539_RS09465 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:3.90.79.10 238 276 0.0031 T 29-03-2018 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:1.10.1670.10 124 230 4.1E-32 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 SMART SM00478 44 195 4.8E-42 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 SUPERFAMILY SSF48150 9 230 4.24E-72 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 Pfam PF14815 NUDIX domain 241 334 6.9E-18 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 272 2.7E-101 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 171 1.3E-20 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 SUPERFAMILY SSF55811 225 336 2.84E-20 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:1.10.340.30 26 123 5.5E-35 T 29-03-2018 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 Pfam PF00633 Helix-hairpin-helix motif 108 133 3.0E-6 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:3.90.79.10 277 343 0.3 T 29-03-2018 AL539_RS09310 6395ef91561ae5ead09f436fe10091d2 343 Gene3D G3DSA:3.90.79.10 238 276 0.0031 T 29-03-2018 AL539_RS10635 9fae91eb8fc3a4551d2a956cfa7b20c3 326 PIRSF PIRSF005651 1 326 1.2E-95 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AL539_RS10635 9fae91eb8fc3a4551d2a956cfa7b20c3 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.2E-136 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AL539_RS10635 9fae91eb8fc3a4551d2a956cfa7b20c3 326 SMART SM00244 18 218 9.6E-50 T 29-03-2018 IPR001107 Band 7 domain AL539_RS10635 9fae91eb8fc3a4551d2a956cfa7b20c3 326 SUPERFAMILY SSF117892 56 142 2.22E-21 T 29-03-2018 IPR001107 Band 7 domain AL539_RS10635 9fae91eb8fc3a4551d2a956cfa7b20c3 326 SUPERFAMILY SSF117892 173 223 2.22E-21 T 29-03-2018 IPR001107 Band 7 domain AL539_RS10635 9fae91eb8fc3a4551d2a956cfa7b20c3 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.4E-28 T 29-03-2018 IPR001107 Band 7 domain AL539_RS16975 679d221f15fd03dd6715dc24cc870304 203 Pfam PF11659 Protein of unknown function (DUF3261) 55 198 1.1E-31 T 29-03-2018 IPR021675 Protein of unknown function DUF3261 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 2.1E-16 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 SUPERFAMILY SSF51905 155 340 1.41E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 SMART SM00450 473 567 6.2E-14 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 SUPERFAMILY SSF55424 344 467 6.19E-35 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Gene3D G3DSA:3.50.50.60 127 274 1.0E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.8E-23 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.8E-23 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.8E-23 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.8E-23 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.8E-23 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Gene3D G3DSA:3.40.250.10 463 567 4.0E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 SUPERFAMILY SSF52821 459 561 2.88E-23 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Pfam PF00581 Rhodanese-like domain 483 560 6.1E-9 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Gene3D G3DSA:3.50.50.60 275 367 3.0E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Gene3D G3DSA:3.50.50.60 1 126 8.7E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Gene3D G3DSA:3.30.390.30 368 462 7.1E-25 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 8.9E-21 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.9E-21 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 8.9E-21 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 8.9E-21 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 8.9E-21 T 29-03-2018 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 1.2E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18290 28cd6727ee953432cd6765670ff016f8 567 SUPERFAMILY SSF51905 2 197 2.11E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS03185 b5d47ec195b1ea17c394b5367d9c8cd3 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 166 1.6E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS03185 b5d47ec195b1ea17c394b5367d9c8cd3 740 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 735 8.4E-104 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS03185 b5d47ec195b1ea17c394b5367d9c8cd3 740 SUPERFAMILY SSF56935 431 740 5.66E-128 T 29-03-2018 AL539_RS03185 b5d47ec195b1ea17c394b5367d9c8cd3 740 SUPERFAMILY SSF56935 26 404 5.66E-128 T 29-03-2018 AL539_RS03185 b5d47ec195b1ea17c394b5367d9c8cd3 740 Gene3D G3DSA:2.170.130.10 23 173 1.9E-30 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS03185 b5d47ec195b1ea17c394b5367d9c8cd3 740 Gene3D G3DSA:2.40.170.20 181 740 1.4E-74 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS03185 b5d47ec195b1ea17c394b5367d9c8cd3 740 Pfam PF00593 TonB dependent receptor 259 738 6.3E-44 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 PIRSF PIRSF004750 6 281 2.7E-130 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 9.8E-129 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.065 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 Gene3D G3DSA:3.30.1130.10 143 281 7.9E-53 T 29-03-2018 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 Pfam PF14489 QueF-like protein 194 270 2.7E-27 T 29-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.6E-49 T 29-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 Gene3D G3DSA:3.30.1130.10 21 135 8.9E-43 T 29-03-2018 AL539_RS15990 bd52a4c3ab74c4cb538b0e4e7023f568 281 SUPERFAMILY SSF55620 184 267 2.74E-10 T 29-03-2018 AL539_RS09445 e5d646c6de91c8daecedf57a53c6be47 380 SUPERFAMILY SSF56349 47 354 1.12E-33 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS09445 e5d646c6de91c8daecedf57a53c6be47 380 Gene3D G3DSA:1.10.443.10 165 358 1.6E-26 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS09445 e5d646c6de91c8daecedf57a53c6be47 380 Gene3D G3DSA:1.10.150.130 35 146 2.0E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS09445 e5d646c6de91c8daecedf57a53c6be47 380 Pfam PF00589 Phage integrase family 176 352 4.3E-18 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS09590 e5d646c6de91c8daecedf57a53c6be47 380 SUPERFAMILY SSF56349 47 354 1.12E-33 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS09590 e5d646c6de91c8daecedf57a53c6be47 380 Gene3D G3DSA:1.10.443.10 165 358 1.6E-26 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS09590 e5d646c6de91c8daecedf57a53c6be47 380 Gene3D G3DSA:1.10.150.130 35 146 2.0E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS09590 e5d646c6de91c8daecedf57a53c6be47 380 Pfam PF00589 Phage integrase family 176 352 4.3E-18 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 SUPERFAMILY SSF46689 220 268 1.61E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 Gene3D G3DSA:1.10.10.60 170 219 3.4E-12 T 29-03-2018 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 SMART SM00342 183 266 1.5E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 Gene3D G3DSA:1.10.10.60 220 269 2.9E-13 T 29-03-2018 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 Pfam PF12833 Helix-turn-helix domain 189 267 2.5E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 SUPERFAMILY SSF46689 170 216 1.79E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 5.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 5.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 Gene3D G3DSA:2.60.120.280 21 169 4.4E-8 T 29-03-2018 AL539_RS22795 56ee4133fd14cab3fbce08034d9b1783 270 SUPERFAMILY SSF51215 30 130 3.92E-5 T 29-03-2018 AL539_RS13870 bfb58780b831333f43e16fb93bf8198e 315 Gene3D G3DSA:3.40.190.10 183 270 3.7E-24 T 29-03-2018 AL539_RS13870 bfb58780b831333f43e16fb93bf8198e 315 SUPERFAMILY SSF53850 95 301 1.74E-41 T 29-03-2018 AL539_RS13870 bfb58780b831333f43e16fb93bf8198e 315 SUPERFAMILY SSF46785 9 95 2.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13870 bfb58780b831333f43e16fb93bf8198e 315 Gene3D G3DSA:3.40.190.10 97 182 2.2E-8 T 29-03-2018 AL539_RS13870 bfb58780b831333f43e16fb93bf8198e 315 Gene3D G3DSA:1.10.10.10 4 96 8.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13870 bfb58780b831333f43e16fb93bf8198e 315 Pfam PF03466 LysR substrate binding domain 95 296 1.3E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS13870 bfb58780b831333f43e16fb93bf8198e 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 4.0E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 Gene3D G3DSA:3.40.190.10 90 175 1.9E-17 T 29-03-2018 AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 Gene3D G3DSA:1.10.10.10 1 84 1.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 Gene3D G3DSA:3.40.190.10 176 267 1.3E-18 T 29-03-2018 AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 SUPERFAMILY SSF46785 3 83 4.03E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 SUPERFAMILY SSF53850 93 295 3.18E-34 T 29-03-2018 AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 Pfam PF03466 LysR substrate binding domain 93 290 1.2E-34 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS10570 0854aca9bb054342acb741402d99bb2a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15710 d27f2f5836f171116e77704d7be0c03f 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.995 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL539_RS15710 d27f2f5836f171116e77704d7be0c03f 161 Pfam PF01668 SmpB protein 15 157 3.1E-55 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL539_RS15710 d27f2f5836f171116e77704d7be0c03f 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 29-03-2018 IPR020081 SsrA-binding protein, conserved site AL539_RS15710 d27f2f5836f171116e77704d7be0c03f 161 SUPERFAMILY SSF74982 8 139 8.24E-48 T 29-03-2018 IPR023620 Small protein B AL539_RS15710 d27f2f5836f171116e77704d7be0c03f 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 5.6E-52 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL539_RS15710 d27f2f5836f171116e77704d7be0c03f 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 8.0E-68 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AL539_RS15710 d27f2f5836f171116e77704d7be0c03f 161 Gene3D G3DSA:2.40.280.10 15 134 1.3E-43 T 29-03-2018 IPR023620 Small protein B AL539_RS14185 bafc8ff88a24d2c93bf631362f464074 267 Pfam PF03180 NLPA lipoprotein 31 264 2.6E-84 T 29-03-2018 IPR004872 Lipoprotein NlpA family AL539_RS14185 bafc8ff88a24d2c93bf631362f464074 267 PIRSF PIRSF002854 1 267 1.3E-87 T 29-03-2018 IPR004872 Lipoprotein NlpA family AL539_RS14185 bafc8ff88a24d2c93bf631362f464074 267 Gene3D G3DSA:3.40.190.10 123 267 2.3E-45 T 29-03-2018 AL539_RS14185 bafc8ff88a24d2c93bf631362f464074 267 Gene3D G3DSA:3.40.190.10 30 122 3.0E-22 T 29-03-2018 AL539_RS14185 bafc8ff88a24d2c93bf631362f464074 267 SUPERFAMILY SSF53850 31 267 2.87E-80 T 29-03-2018 AL539_RS20910 b3f97fea874e73f5c995783ddf76ba56 959 SUPERFAMILY SSF48208 254 680 7.94E-36 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20910 b3f97fea874e73f5c995783ddf76ba56 959 Gene3D G3DSA:2.60.120.380 829 922 0.022 T 29-03-2018 AL539_RS20910 b3f97fea874e73f5c995783ddf76ba56 959 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 364 509 3.6E-6 T 29-03-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AL539_RS20910 b3f97fea874e73f5c995783ddf76ba56 959 Gene3D G3DSA:2.60.40.10 34 151 3.0E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS20910 b3f97fea874e73f5c995783ddf76ba56 959 Gene3D G3DSA:1.50.10.10 152 625 1.1E-31 T 29-03-2018 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 3.5E-66 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Pfam PF07517 SecA DEAD-like domain 7 403 3.5E-134 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SUPERFAMILY SSF81886 620 840 2.35E-83 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SUPERFAMILY SSF81886 885 897 2.35E-83 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Pfam PF02810 SEC-C motif 889 907 3.3E-10 T 29-03-2018 IPR004027 SEC-C motif AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Gene3D G3DSA:1.10.3060.10 634 732 5.4E-30 T 29-03-2018 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SMART SM00957 6 403 0.0 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Gene3D G3DSA:3.10.450.50 733 909 4.6E-53 T 29-03-2018 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SMART SM00958 228 359 4.2E-80 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 5.2E-38 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SUPERFAMILY SSF52540 369 416 3.72E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SUPERFAMILY SSF52540 5 228 3.72E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 29-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.056 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SUPERFAMILY SSF81767 227 369 2.22E-42 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Gene3D G3DSA:3.40.50.300 300 417 4.1E-10 T 29-03-2018 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Gene3D G3DSA:3.40.50.300 9 266 1.7E-57 T 29-03-2018 AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 SUPERFAMILY SSF52540 418 610 1.12E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14615 c00f67d52142d23d71e8a333c9420b6c 909 Gene3D G3DSA:3.40.50.300 418 633 2.0E-53 T 29-03-2018 AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 SUPERFAMILY SSF81296 1 109 5.04E-22 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 Gene3D G3DSA:3.20.20.80 115 524 5.2E-95 T 29-03-2018 AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 103 9.3E-9 T 29-03-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 SUPERFAMILY SSF51011 527 607 1.25E-12 T 29-03-2018 AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 SUPERFAMILY SSF51445 114 527 3.15E-94 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 PIRSF PIRSF036918 1 608 4.9E-263 T 29-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 Gene3D G3DSA:2.60.40.1180 525 608 5.3E-15 T 29-03-2018 AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 SMART SM00642 126 518 1.5E-87 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 Gene3D G3DSA:2.60.40.10 1 114 3.3E-17 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS06565 feb3f8953b6987efe2b51cf89609d483 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 2.0E-77 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS01890 26b8eb683c90731e23b9746e53a07850 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.5E-9 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL539_RS01890 26b8eb683c90731e23b9746e53a07850 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 SUPERFAMILY SSF52540 637 726 1.1E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 SUPERFAMILY SSF52540 343 391 1.1E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 Pfam PF04851 Type III restriction enzyme, res subunit 313 482 3.0E-18 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 SUPERFAMILY SSF52540 279 536 9.32E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 Gene3D G3DSA:3.40.50.300 553 744 7.1E-6 T 29-03-2018 AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 223 8.4E-40 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 66 740 3.4E-138 T 29-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 Gene3D G3DSA:3.40.50.300 221 510 1.9E-18 T 29-03-2018 AL539_RS00310 0f876fda1b67c538d0967d53af8fe7f5 1092 SMART SM00487 310 519 3.2E-10 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS14995 798208543c4cc98919c4fd3860aa2961 309 Gene3D G3DSA:1.10.8.10 247 277 8.4E-11 T 29-03-2018 AL539_RS14995 798208543c4cc98919c4fd3860aa2961 309 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.205 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AL539_RS14995 798208543c4cc98919c4fd3860aa2961 309 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 29-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL539_RS14995 798208543c4cc98919c4fd3860aa2961 309 Pfam PF13580 SIS domain 49 172 1.9E-10 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS14995 798208543c4cc98919c4fd3860aa2961 309 Gene3D G3DSA:3.40.50.10490 19 246 4.9E-56 T 29-03-2018 AL539_RS14995 798208543c4cc98919c4fd3860aa2961 309 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 2.9E-130 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AL539_RS14995 798208543c4cc98919c4fd3860aa2961 309 SUPERFAMILY SSF53697 12 255 5.38E-76 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 SUPERFAMILY SSF82866 286 480 4.19E-34 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 SUPERFAMILY SSF82693 262 317 1.99E-6 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 SUPERFAMILY SSF82693 136 175 1.99E-6 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 Gene3D G3DSA:1.20.1640.10 275 496 9.2E-35 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 1.4E-158 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 Gene3D G3DSA:3.30.2090.10 716 799 1.1E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 Gene3D G3DSA:3.30.2090.10 174 262 1.4E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 SUPERFAMILY SSF82866 797 1022 7.72E-47 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 Gene3D G3DSA:3.30.70.1430 558 667 1.1E-9 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 Gene3D G3DSA:1.20.1640.10 800 1023 1.5E-43 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 SUPERFAMILY SSF82693 38 131 1.1E-17 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 Gene3D G3DSA:3.30.70.1430 39 136 1.1E-16 T 29-03-2018 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 2.0E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 2.0E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 2.0E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 SUPERFAMILY SSF82714 724 797 1.18E-9 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS21110 9977cdbc854c79f775bab2d0d357861d 1033 SUPERFAMILY SSF82714 177 259 2.35E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 Gene3D G3DSA:3.40.50.300 4 214 3.1E-60 T 29-03-2018 AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 5.5E-26 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 SUPERFAMILY SSF52540 68 351 1.04E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 SMART SM00490 250 331 1.3E-29 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 Gene3D G3DSA:3.40.50.300 215 410 3.5E-42 T 29-03-2018 AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 3.4E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS22860 8a40547c2c853dea435d01411ff6974c 412 SMART SM00487 19 212 7.2E-48 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS25060 8d54bbc9692bdf2cd353d9bfd4b2b343 294 SUPERFAMILY SSF81452 4 294 2.2E-77 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25060 8d54bbc9692bdf2cd353d9bfd4b2b343 294 Gene3D G3DSA:1.10.287.70 1 78 2.0E-19 T 29-03-2018 AL539_RS25060 8d54bbc9692bdf2cd353d9bfd4b2b343 294 Gene3D G3DSA:1.20.120.80 79 294 1.3E-64 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25060 8d54bbc9692bdf2cd353d9bfd4b2b343 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 4.0E-48 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 Gene3D G3DSA:1.10.8.10 5 85 7.1E-24 T 29-03-2018 AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.587 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 2.7E-93 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 282 2.4E-81 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 SUPERFAMILY SSF53335 7 279 1.61E-57 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 Gene3D G3DSA:3.40.50.150 86 281 3.5E-40 T 29-03-2018 AL539_RS16300 194bec6afef5bcbf30c7ad89269d5286 284 Pfam PF13847 Methyltransferase domain 117 248 8.9E-18 T 29-03-2018 IPR025714 Methyltransferase domain AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 SUPERFAMILY SSF52540 2 205 1.29E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 9.9E-301 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 SUPERFAMILY SSF50447 165 288 4.16E-30 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.1E-49 T 29-03-2018 IPR013842 GTP-binding protein LepA, C-terminal AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 SUPERFAMILY SSF54980 399 493 2.73E-24 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Gene3D G3DSA:3.30.70.870 288 367 1.2E-27 T 29-03-2018 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.2E-17 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.2E-52 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Pfam PF00679 Elongation factor G C-terminus 399 482 4.7E-20 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.7E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Gene3D G3DSA:3.40.50.300 1 185 3.7E-36 T 29-03-2018 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Gene3D G3DSA:3.30.70.240 391 549 5.6E-27 T 29-03-2018 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.554 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 SMART SM00838 398 486 0.0048 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS09045 97fa1308b77d7e9b11c6f0b758e3f870 597 Gene3D G3DSA:2.40.30.10 188 287 1.2E-22 T 29-03-2018 AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 1.3E-27 T 29-03-2018 IPR023214 HAD-like domain AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 189 1.6E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 178 191 1.7E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 1.7E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.7E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 1.7E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 6.0E-55 T 29-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 SUPERFAMILY SSF56784 8 193 1.19E-44 T 29-03-2018 IPR023214 HAD-like domain AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 Gene3D G3DSA:1.10.150.240 22 72 5.6E-11 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_RS20300 c78d2aca31fa7e3f849488d93642a8e1 200 Gene3D G3DSA:3.40.50.1000 73 194 2.2E-22 T 29-03-2018 IPR023214 HAD-like domain AL539_RS23045 d139c71e283e798b30a4a5be27a99290 345 Gene3D G3DSA:1.10.3470.10 15 345 2.7E-60 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS23045 d139c71e283e798b30a4a5be27a99290 345 SUPERFAMILY SSF81345 20 342 1.57E-76 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS23045 d139c71e283e798b30a4a5be27a99290 345 Pfam PF01032 FecCD transport family 40 342 3.9E-83 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Gene3D G3DSA:3.90.1820.10 276 442 1.3E-39 T 29-03-2018 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Gene3D G3DSA:3.90.1820.10 1 275 9.2E-58 T 29-03-2018 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 SUPERFAMILY SSF56327 170 441 9.71E-70 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 SUPERFAMILY SSF51735 3 164 1.16E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 171 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 3.4E-35 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 3.4E-35 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 3.4E-35 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 3.4E-35 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 3.4E-35 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.4E-35 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 416 3.8E-45 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AL539_RS19845 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 4.9E-46 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS25655 82a5d28f7fde4e2083590bd763a98439 399 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 211 4.6E-56 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL539_RS25655 82a5d28f7fde4e2083590bd763a98439 399 SUPERFAMILY SSF52540 3 321 6.37E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25655 82a5d28f7fde4e2083590bd763a98439 399 SMART SM00833 257 374 8.2E-46 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_RS25655 82a5d28f7fde4e2083590bd763a98439 399 Gene3D G3DSA:3.40.50.300 3 230 4.2E-52 T 29-03-2018 AL539_RS25655 82a5d28f7fde4e2083590bd763a98439 399 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 257 374 1.6E-26 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_RS25655 82a5d28f7fde4e2083590bd763a98439 399 Gene3D G3DSA:3.30.1220.10 241 375 1.4E-30 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 SUPERFAMILY SSF48498 80 207 1.96E-40 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.7E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.7E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 3.4E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 Gene3D G3DSA:1.10.10.60 1 50 3.0E-17 T 29-03-2018 AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 Gene3D G3DSA:1.10.357.10 51 210 6.1E-26 T 29-03-2018 AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 SUPERFAMILY SSF46689 3 73 1.64E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS02015 99958b64e13b4a43a111887f03de7783 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_RS07700 d9d62f0f9266055817212be40ca72d96 379 Gene3D G3DSA:3.40.50.2000 171 365 4.6E-13 T 29-03-2018 AL539_RS07700 d9d62f0f9266055817212be40ca72d96 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 9.0E-132 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL539_RS07700 d9d62f0f9266055817212be40ca72d96 379 SUPERFAMILY SSF53756 6 379 7.07E-29 T 29-03-2018 AL539_RS07700 d9d62f0f9266055817212be40ca72d96 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 1.8E-145 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL539_RS07700 d9d62f0f9266055817212be40ca72d96 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.09 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL539_RS10205 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:1.10.10.10 6 91 4.1E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10205 a62113938c9df315730818a1c9f30bd3 154 SUPERFAMILY SSF46785 11 144 2.2E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10205 a62113938c9df315730818a1c9f30bd3 154 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL539_RS23410 19732f2fb75d44c7a68d716c7f2f4a16 166 Pfam PF02469 Fasciclin domain 43 165 6.2E-37 T 29-03-2018 IPR000782 FAS1 domain AL539_RS23410 19732f2fb75d44c7a68d716c7f2f4a16 166 SMART SM00554 67 166 3.2E-32 T 29-03-2018 IPR000782 FAS1 domain AL539_RS23410 19732f2fb75d44c7a68d716c7f2f4a16 166 Gene3D G3DSA:2.30.180.10 30 166 1.6E-41 T 29-03-2018 IPR000782 FAS1 domain AL539_RS23410 19732f2fb75d44c7a68d716c7f2f4a16 166 SUPERFAMILY SSF82153 24 165 3.27E-43 T 29-03-2018 IPR000782 FAS1 domain AL539_RS19425 c676a89fac31e6a4df903a237f177827 302 Gene3D G3DSA:3.40.50.1980 141 301 2.5E-26 T 29-03-2018 AL539_RS19425 c676a89fac31e6a4df903a237f177827 302 Gene3D G3DSA:3.40.50.1980 21 140 1.4E-25 T 29-03-2018 AL539_RS19425 c676a89fac31e6a4df903a237f177827 302 SUPERFAMILY SSF53807 20 282 2.78E-59 T 29-03-2018 AL539_RS19425 c676a89fac31e6a4df903a237f177827 302 Pfam PF01497 Periplasmic binding protein 48 275 3.1E-20 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 Pfam PF00672 HAMP domain 219 267 2.1E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 Gene3D G3DSA:1.10.287.1060 77 196 0.074 T 29-03-2018 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 4.8E-7 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 4.8E-7 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 Gene3D G3DSA:1.10.287.1060 242 326 0.089 T 29-03-2018 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 SMART SM00304 218 270 1.5E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 SMART SM00283 285 546 1.3E-65 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 Gene3D G3DSA:1.10.287.950 327 547 3.4E-48 T 29-03-2018 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 512 1.4E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24080 d5e8a3de5ea57b6f5468659b5d231664 547 SUPERFAMILY SSF58104 239 547 1.07E-69 T 29-03-2018 AL539_RS02550 d214ff77401217852ff38cea76f40e88 310 Gene3D G3DSA:1.10.3720.10 31 299 5.7E-41 T 29-03-2018 AL539_RS02550 d214ff77401217852ff38cea76f40e88 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 2.8E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02550 d214ff77401217852ff38cea76f40e88 310 SUPERFAMILY SSF161098 106 291 6.67E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02550 d214ff77401217852ff38cea76f40e88 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 66 2.0E-12 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_RS18690 f036e0d69bb35846d7b31892ea372b08 189 Gene3D G3DSA:2.40.128.110 18 185 1.3E-45 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL539_RS18690 f036e0d69bb35846d7b31892ea372b08 189 Pfam PF04264 YceI-like domain 25 184 2.6E-36 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL539_RS18690 f036e0d69bb35846d7b31892ea372b08 189 SUPERFAMILY SSF101874 23 188 7.85E-50 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL539_RS18690 f036e0d69bb35846d7b31892ea372b08 189 SMART SM00867 24 187 6.4E-62 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL539_RS18690 f036e0d69bb35846d7b31892ea372b08 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.859 T 29-03-2018 IPR023480 Uncharacterised protein family UPF0312/YceI AL539_RS18010 8ba5adfb2a27b2e202cecee9b97e7965 484 Pfam PF05762 VWA domain containing CoxE-like protein 318 447 2.1E-11 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like AL539_RS18010 8ba5adfb2a27b2e202cecee9b97e7965 484 SUPERFAMILY SSF53300 318 475 1.41E-24 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS18010 8ba5adfb2a27b2e202cecee9b97e7965 484 Gene3D G3DSA:3.40.50.410 288 484 3.6E-18 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS17885 c16a7c06aff4ad95c8b4266ff28dcc0f 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 140 6.8E-43 T 29-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL539_RS17885 c16a7c06aff4ad95c8b4266ff28dcc0f 231 Gene3D G3DSA:3.40.1730.10 8 231 1.9E-56 T 29-03-2018 AL539_RS17885 c16a7c06aff4ad95c8b4266ff28dcc0f 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 137 7.6E-38 T 29-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL539_RS17885 c16a7c06aff4ad95c8b4266ff28dcc0f 231 PIRSF PIRSF029287 3 229 7.9E-31 T 29-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AL539_RS06445 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL539_RS06445 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS06445 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS06445 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.7E-52 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.7E-52 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 2.7E-52 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.7E-52 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.7E-52 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 2.7E-52 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 9.7E-151 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS02905 a335a825f761bc3b3669c959b3c5cb6e 458 Pfam PF01235 Sodium:alanine symporter family 54 449 4.2E-137 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 Gene3D G3DSA:3.20.20.10 34 271 1.6E-50 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 282 3.8E-31 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 SUPERFAMILY SSF51419 32 285 1.74E-62 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 SUPERFAMILY SSF50621 246 398 3.77E-34 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 Gene3D G3DSA:2.40.37.10 272 400 3.3E-30 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 378 1.8E-14 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 3.0E-8 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 3.0E-8 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 3.0E-8 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS23005 93543722d902849b62b57666ca1c8e45 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 3.0E-8 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS03330 4e4e69ddce4f6d014ea6f10169cb79de 357 SUPERFAMILY SSF53756 1 352 5.1E-74 T 29-03-2018 AL539_RS03330 4e4e69ddce4f6d014ea6f10169cb79de 357 Gene3D G3DSA:3.40.50.2000 2 178 2.0E-16 T 29-03-2018 AL539_RS03330 4e4e69ddce4f6d014ea6f10169cb79de 357 Gene3D G3DSA:3.40.50.2000 179 332 3.8E-40 T 29-03-2018 AL539_RS03330 4e4e69ddce4f6d014ea6f10169cb79de 357 Pfam PF00534 Glycosyl transferases group 1 184 326 1.1E-35 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS03330 4e4e69ddce4f6d014ea6f10169cb79de 357 Pfam PF13439 Glycosyltransferase Family 4 11 169 6.1E-20 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL539_RS00880 ec4ed790ada5c18ca7a231eaf64a1d0d 340 Gene3D G3DSA:1.10.150.280 194 272 0.0017 T 29-03-2018 AL539_RS00880 ec4ed790ada5c18ca7a231eaf64a1d0d 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 5.0E-26 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AL539_RS00880 ec4ed790ada5c18ca7a231eaf64a1d0d 340 Pfam PF01548 Transposase 6 150 1.4E-16 T 29-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AL539_RS03380 fd38765ee4f5ea6c9c104828958f1496 228 SUPERFAMILY SSF52540 23 204 1.01E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03380 fd38765ee4f5ea6c9c104828958f1496 228 Gene3D G3DSA:3.40.50.300 19 210 1.4E-20 T 29-03-2018 AL539_RS17655 5266173dc58f0b0c81bd65d660006d02 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.366 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL539_RS17655 5266173dc58f0b0c81bd65d660006d02 485 Pfam PF08323 Starch synthase catalytic domain 8 239 4.1E-67 T 29-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL539_RS17655 5266173dc58f0b0c81bd65d660006d02 485 SUPERFAMILY SSF53756 4 484 7.22E-109 T 29-03-2018 AL539_RS17655 5266173dc58f0b0c81bd65d660006d02 485 Pfam PF00534 Glycosyl transferases group 1 299 445 4.3E-14 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS17655 5266173dc58f0b0c81bd65d660006d02 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 5.7E-168 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL539_RS17655 5266173dc58f0b0c81bd65d660006d02 485 Gene3D G3DSA:3.40.50.2000 256 479 1.4E-38 T 29-03-2018 AL539_RS19980 9234b1ebd1655f952397a114b674fc07 136 Gene3D G3DSA:3.10.450.40 3 132 1.3E-18 T 29-03-2018 AL539_RS19980 9234b1ebd1655f952397a114b674fc07 136 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 136 5.5E-38 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AL539_RS19980 9234b1ebd1655f952397a114b674fc07 136 Pfam PF04965 Gene 25-like lysozyme 28 115 2.2E-17 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL539_RS19980 9234b1ebd1655f952397a114b674fc07 136 SUPERFAMILY SSF160719 28 131 2.35E-20 T 29-03-2018 AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 SMART SM00862 151 227 2.2E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 SUPERFAMILY SSF52172 4 130 2.13E-37 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 Pfam PF00072 Response regulator receiver domain 6 114 1.3E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 Gene3D G3DSA:3.40.50.2300 2 125 3.8E-33 T 29-03-2018 AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 SMART SM00448 4 114 2.1E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 SUPERFAMILY SSF46894 137 228 6.52E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 2.6E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS20580 0d4ae9119bc8127d9a60c485cd85ee29 230 Gene3D G3DSA:1.10.10.10 126 230 1.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Gene3D G3DSA:1.20.150.20 384 510 9.0E-45 T 29-03-2018 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.647 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 SUPERFAMILY SSF47917 383 511 2.07E-45 T 29-03-2018 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 7.0E-251 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Gene3D G3DSA:2.40.30.20 3 82 1.6E-28 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 SUPERFAMILY SSF52540 96 381 1.26E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 3.4E-44 T 29-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 8.0E-72 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12155 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Gene3D G3DSA:3.40.50.300 83 375 2.4E-112 T 29-03-2018 AL539_RS15565 e1c489d7266afeb4aebf1292a123bbae 198 Pfam PF00589 Phage integrase family 27 183 9.1E-16 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS15565 e1c489d7266afeb4aebf1292a123bbae 198 Gene3D G3DSA:1.10.443.10 12 188 9.3E-23 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS15565 e1c489d7266afeb4aebf1292a123bbae 198 SUPERFAMILY SSF56349 12 196 3.83E-37 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 2.5E-121 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Gene3D G3DSA:3.30.70.100 88 161 2.0E-14 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 1.5E-26 T 29-03-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 SUPERFAMILY SSF56784 500 519 4.32E-46 T 29-03-2018 IPR023214 HAD-like domain AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 SUPERFAMILY SSF56784 554 781 4.32E-46 T 29-03-2018 IPR023214 HAD-like domain AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Gene3D G3DSA:1.20.1110.10 245 514 2.5E-32 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 SUPERFAMILY SSF81653 319 402 8.24E-23 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 8.8E-31 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 SUPERFAMILY SSF55008 86 162 3.14E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Pfam PF00403 Heavy-metal-associated domain 93 154 1.5E-7 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Pfam PF00122 E1-E2 ATPase 318 478 8.7E-46 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 SUPERFAMILY SSF81665 250 306 4.71E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 SUPERFAMILY SSF81665 726 766 4.71E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 SUPERFAMILY SSF81665 404 495 4.71E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 2.5E-159 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 1.1E-152 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 5.0E-24 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 5.0E-24 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 5.0E-24 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.0E-24 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.0E-24 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Gene3D G3DSA:3.40.1110.10 515 645 1.5E-23 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 Gene3D G3DSA:3.40.50.1000 646 735 5.9E-18 T 29-03-2018 IPR023214 HAD-like domain AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 1.0E-72 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.0E-6 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.0E-6 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.0E-6 T 29-03-2018 AL539_RS03785 d00c6e700135e577d7a782c656ac517d 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.0E-6 T 29-03-2018 AL539_RS11525 8475c372386142871089ba21a95f777b 407 Gene3D G3DSA:3.20.20.450 2 195 7.1E-21 T 29-03-2018 IPR001633 EAL domain AL539_RS11525 8475c372386142871089ba21a95f777b 407 SUPERFAMILY SSF141868 4 197 9.29E-28 T 29-03-2018 IPR001633 EAL domain AL539_RS11525 8475c372386142871089ba21a95f777b 407 PIRSF PIRSF003180 1 407 2.7E-170 T 29-03-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL539_RS11525 8475c372386142871089ba21a95f777b 407 Gene3D G3DSA:1.10.3210.10 196 361 1.4E-17 T 29-03-2018 AL539_RS11525 8475c372386142871089ba21a95f777b 407 Pfam PF00563 EAL domain 74 194 3.2E-13 T 29-03-2018 IPR001633 EAL domain AL539_RS11525 8475c372386142871089ba21a95f777b 407 SUPERFAMILY SSF109604 185 404 3.77E-40 T 29-03-2018 AL539_RS11525 8475c372386142871089ba21a95f777b 407 Pfam PF08668 HDOD domain 208 325 6.1E-13 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AL539_RS11525 8475c372386142871089ba21a95f777b 407 SMART SM00052 2 199 7.9E-4 T 29-03-2018 IPR001633 EAL domain AL539_RS10385 c0a7fcb6883057a1dd7846e996c421ce 106 Gene3D G3DSA:1.10.140.10 3 103 3.7E-59 T 29-03-2018 IPR023453 Methionine repressor MetJ domain AL539_RS10385 c0a7fcb6883057a1dd7846e996c421ce 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-48 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL539_RS10385 c0a7fcb6883057a1dd7846e996c421ce 106 Hamap MF_00744 Met repressor [metJ]. 1 105 35.001 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL539_RS10385 c0a7fcb6883057a1dd7846e996c421ce 106 SUPERFAMILY SSF47598 3 104 5.78E-57 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL539_RS10385 c0a7fcb6883057a1dd7846e996c421ce 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.9E-59 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL539_RS24850 ec7b4a9073de277b4c1cd6e5ae542bbf 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 1.3E-61 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AL539_RS24850 ec7b4a9073de277b4c1cd6e5ae542bbf 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 1.5E-137 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL539_RS24850 ec7b4a9073de277b4c1cd6e5ae542bbf 351 PIRSF PIRSF005508 1 351 9.9E-136 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL539_RS25715 7b728779fbbb9df641b2a93e22d5c9bc 124 Gene3D G3DSA:1.10.1660.10 1 56 1.6E-19 T 29-03-2018 AL539_RS25715 7b728779fbbb9df641b2a93e22d5c9bc 124 Pfam PF09278 MerR, DNA binding 47 110 2.3E-16 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL539_RS25715 7b728779fbbb9df641b2a93e22d5c9bc 124 SUPERFAMILY SSF46955 3 112 1.25E-25 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS25715 7b728779fbbb9df641b2a93e22d5c9bc 124 SMART SM00422 4 71 1.2E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS25715 7b728779fbbb9df641b2a93e22d5c9bc 124 Pfam PF00376 MerR family regulatory protein 5 40 8.8E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS25715 7b728779fbbb9df641b2a93e22d5c9bc 124 Gene3D G3DSA:1.10.1660.10 57 124 9.4E-14 T 29-03-2018 AL539_RS18245 87c33df9e43905e180570b180441b029 464 Pfam PF07690 Major Facilitator Superfamily 35 396 6.2E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS18245 87c33df9e43905e180570b180441b029 464 PIRSF PIRSF002808 9 461 2.5E-108 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL539_RS18245 87c33df9e43905e180570b180441b029 464 Gene3D G3DSA:1.20.1250.20 246 461 1.7E-19 T 29-03-2018 AL539_RS18245 87c33df9e43905e180570b180441b029 464 SUPERFAMILY SSF103473 17 445 8.89E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS18245 87c33df9e43905e180570b180441b029 464 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 3.9E-139 T 29-03-2018 AL539_RS18245 87c33df9e43905e180570b180441b029 464 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AL539_RS18245 87c33df9e43905e180570b180441b029 464 Gene3D G3DSA:1.20.1250.20 21 227 3.0E-23 T 29-03-2018 AL539_RS18695 e2a558c3b1cc5f4d62d3c5bd7b8b0d47 179 SUPERFAMILY SSF81342 4 175 2.59E-35 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL539_RS18695 e2a558c3b1cc5f4d62d3c5bd7b8b0d47 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 1.5E-31 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL539_RS18695 e2a558c3b1cc5f4d62d3c5bd7b8b0d47 179 Gene3D G3DSA:1.20.950.20 1 179 1.6E-35 T 29-03-2018 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PIRSF PIRSF000724 1 386 6.4E-134 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 29-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 Pfam PF00162 Phosphoglycerate kinase 6 373 2.3E-138 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 Gene3D G3DSA:3.40.50.1260 175 371 2.7E-73 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 SUPERFAMILY SSF53748 3 382 1.18E-143 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 Gene3D G3DSA:3.40.50.1260 3 174 1.7E-61 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS09180 65cd57cb94af02a0ff4046915bcf1cc1 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.135 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Gene3D G3DSA:3.40.50.300 424 609 4.2E-22 T 29-03-2018 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Gene3D G3DSA:3.40.50.300 1 35 2.2E-9 T 29-03-2018 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Gene3D G3DSA:3.40.50.300 610 938 2.9E-55 T 29-03-2018 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 SUPERFAMILY SSF52540 620 912 3.51E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.967 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Pfam PF00005 ABC transporter 622 859 2.1E-10 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Gene3D G3DSA:1.10.8.280 284 404 8.9E-38 T 29-03-2018 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Gene3D G3DSA:3.40.50.300 36 137 2.2E-4 T 29-03-2018 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 Gene3D G3DSA:3.30.190.20 138 247 4.0E-41 T 29-03-2018 AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 SUPERFAMILY SSF52540 429 568 6.45E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 SUPERFAMILY SSF52540 4 204 6.45E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10080 c82dbeed5d9c0ff2a1547d19c2ac8635 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS02750 412c42203d9472cb4050403d6296cd77 227 Gene3D G3DSA:3.60.15.10 19 227 1.2E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS02750 412c42203d9472cb4050403d6296cd77 227 Pfam PF14234 Domain of unknown function (DUF4336) 7 147 1.0E-14 T 29-03-2018 IPR025638 Protein of unknown function DUF4336 AL539_RS02750 412c42203d9472cb4050403d6296cd77 227 SUPERFAMILY SSF56281 3 224 3.43E-14 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 SUPERFAMILY SSF50331 250 372 2.27E-8 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 Gene3D G3DSA:3.40.50.300 13 294 1.2E-75 T 29-03-2018 AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 SUPERFAMILY SSF52540 18 257 6.14E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 1.2E-155 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 Pfam PF00005 ABC transporter 35 174 1.5E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 SMART SM00382 42 225 4.1E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03740 799b13478c4dc0db99545e03ae8b03c7 377 Pfam PF08402 TOBE domain 292 371 7.9E-12 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 SUPERFAMILY SSF143856 118 234 5.1E-48 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 PIRSF PIRSF001491 1 406 5.3E-160 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 Gene3D G3DSA:3.40.720.10 260 404 1.9E-12 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 2.0E-178 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.855 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 SUPERFAMILY SSF53649 1 115 1.3E-68 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 SUPERFAMILY SSF53649 236 406 1.3E-68 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.1E-42 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL539_RS08290 00bcc950f7d6463b22d67616779ba47e 406 Gene3D G3DSA:3.30.70.1250 117 234 1.3E-49 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.1E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 Gene3D G3DSA:3.40.50.2300 1 130 8.0E-34 T 29-03-2018 AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 SMART SM00862 157 233 3.4E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 SUPERFAMILY SSF46894 133 234 1.59E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 Pfam PF00072 Response regulator receiver domain 5 113 1.3E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 SMART SM00448 3 113 3.1E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 Gene3D G3DSA:1.10.10.10 131 236 1.8E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17690 19c1b984544869b6aa82fdad7cf6971d 236 SUPERFAMILY SSF52172 2 124 4.55E-37 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS05870 77b66637d12331a4742ee8f1c5f7a8f0 377 PIRSF PIRSF038941 1 372 1.1E-124 T 29-03-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL539_RS05870 77b66637d12331a4742ee8f1c5f7a8f0 377 SUPERFAMILY SSF50621 212 359 5.44E-23 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS05870 77b66637d12331a4742ee8f1c5f7a8f0 377 Gene3D G3DSA:3.20.20.10 15 238 1.2E-36 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS05870 77b66637d12331a4742ee8f1c5f7a8f0 377 Gene3D G3DSA:2.40.37.10 239 370 6.8E-19 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS05870 77b66637d12331a4742ee8f1c5f7a8f0 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 4.6E-161 T 29-03-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL539_RS05870 77b66637d12331a4742ee8f1c5f7a8f0 377 SUPERFAMILY SSF51419 14 242 2.4E-41 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS05870 77b66637d12331a4742ee8f1c5f7a8f0 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 2.8E-4 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.1E-238 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 Pfam PF00682 HMGL-like 4 273 3.6E-101 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.471 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 4.0E-30 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 SUPERFAMILY SSF51569 1 291 2.05E-100 T 29-03-2018 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 SUPERFAMILY SSF110921 393 498 4.45E-21 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 Gene3D G3DSA:3.20.20.70 1 331 1.6E-109 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 SMART SM00917 369 499 6.8E-28 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL539_RS14010 86e9cba08cb5cb1e8129855171d162a2 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL539_RS06450 f8fcdf4afdf3e8cba293eba63e7fd629 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.1E-15 T 29-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AL539_RS17050 8dd0f763926903129bd4d7acd9612f23 414 Gene3D G3DSA:3.50.50.60 5 178 3.9E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS17050 8dd0f763926903129bd4d7acd9612f23 414 SUPERFAMILY SSF51905 285 390 3.21E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS17050 8dd0f763926903129bd4d7acd9612f23 414 SUPERFAMILY SSF51905 6 175 3.21E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS17050 8dd0f763926903129bd4d7acd9612f23 414 Gene3D G3DSA:3.30.9.10 179 329 3.4E-15 T 29-03-2018 AL539_RS17050 8dd0f763926903129bd4d7acd9612f23 414 Pfam PF01494 FAD binding domain 7 164 7.5E-16 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 PIRSF PIRSF000103 1 301 8.1E-79 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 8.5E-52 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 Gene3D G3DSA:3.40.50.720 2 178 7.0E-34 T 29-03-2018 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 Gene3D G3DSA:1.10.1040.10 179 301 5.5E-31 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 2.6E-120 T 29-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 SUPERFAMILY SSF48179 168 297 7.6E-40 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 SUPERFAMILY SSF51735 3 167 3.05E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS25745 33fafc7efc5aa397c1ecb9edeb82a5e3 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 296 9.2E-30 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 Gene3D G3DSA:3.30.450.40 15 188 9.0E-4 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 Pfam PF00563 EAL domain 353 588 1.6E-60 T 29-03-2018 IPR001633 EAL domain AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 9.6E-28 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 SUPERFAMILY SSF55073 182 332 2.28E-31 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 Gene3D G3DSA:3.30.70.270 189 339 9.6E-36 T 29-03-2018 AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 SMART SM00267 166 330 6.3E-27 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 Gene3D G3DSA:3.20.20.450 340 606 3.2E-75 T 29-03-2018 IPR001633 EAL domain AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 SMART SM00052 349 593 1.4E-72 T 29-03-2018 IPR001633 EAL domain AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 SUPERFAMILY SSF141868 358 601 1.83E-70 T 29-03-2018 IPR001633 EAL domain AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 2.5E-26 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24965 18173e984a8837e2c007b0ba81fb1f31 606 SUPERFAMILY SSF55781 23 142 2.81E-5 T 29-03-2018 IPR029016 GAF domain-like AL539_RS13065 21e7b50ee82564fd0b67a65110fe0e52 254 Pfam PF11932 Protein of unknown function (DUF3450) 11 249 3.8E-89 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL539_RS13065 21e7b50ee82564fd0b67a65110fe0e52 254 PIRSF PIRSF028069 4 254 7.1E-96 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL539_RS13065 21e7b50ee82564fd0b67a65110fe0e52 254 Gene3D G3DSA:1.20.1170.10 7 207 7.6E-5 T 29-03-2018 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 3.4E-6 T 29-03-2018 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.4E-6 T 29-03-2018 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 3.1E-47 T 29-03-2018 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 SUPERFAMILY SSF54373 213 310 8.24E-33 T 29-03-2018 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 9.8E-7 T 29-03-2018 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 SUPERFAMILY SSF51905 311 452 1.21E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 SUPERFAMILY SSF51905 3 212 1.21E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 Gene3D G3DSA:3.50.50.60 1 386 2.9E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS25880 dfaff60a09108f9175b8180091d490c5 553 SUPERFAMILY SSF54862 454 553 2.93E-27 T 29-03-2018 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.8E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.8E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 Gene3D G3DSA:3.40.50.2300 2 151 2.3E-31 T 29-03-2018 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 Gene3D G3DSA:1.10.8.60 327 438 1.9E-17 T 29-03-2018 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 SUPERFAMILY SSF52540 154 384 5.7E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 Gene3D G3DSA:3.40.50.300 152 326 5.1E-29 T 29-03-2018 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 SUPERFAMILY SSF46689 426 475 2.28E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 SUPERFAMILY SSF52172 16 199 2.28E-38 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 Pfam PF00158 Sigma-54 interaction domain 155 321 6.3E-68 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 SMART SM00448 16 127 8.5E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 Gene3D G3DSA:1.10.10.60 439 475 6.2E-12 T 29-03-2018 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 1.1E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 Pfam PF00072 Response regulator receiver domain 18 127 6.1E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03520 bf734ec65332c8eeadf263df1a6eb78c 483 SMART SM00382 175 321 2.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS04770 fdb21e22bbf6476f2a57e4111c814239 202 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 202 3.7E-72 T 29-03-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent AL539_RS04770 fdb21e22bbf6476f2a57e4111c814239 202 Gene3D G3DSA:2.30.110.10 20 179 2.4E-21 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS04770 fdb21e22bbf6476f2a57e4111c814239 202 SUPERFAMILY SSF50475 32 151 1.87E-16 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS04770 fdb21e22bbf6476f2a57e4111c814239 202 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 122 9.5E-13 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS24830 36928998bf20b920fcf3a671048e18a6 315 Pfam PF13437 HlyD family secretion protein 195 275 3.5E-7 T 29-03-2018 AL539_RS24830 36928998bf20b920fcf3a671048e18a6 315 Gene3D G3DSA:1.20.1600.10 168 304 0.0047 T 29-03-2018 AL539_RS24830 36928998bf20b920fcf3a671048e18a6 315 SUPERFAMILY SSF111369 100 157 3.01E-6 T 29-03-2018 AL539_RS24830 36928998bf20b920fcf3a671048e18a6 315 Gene3D G3DSA:2.40.50.100 34 113 1.3E-7 T 29-03-2018 AL539_RS24830 36928998bf20b920fcf3a671048e18a6 315 Gene3D G3DSA:1.10.287.470 114 158 1.0E-10 T 29-03-2018 AL539_RS24830 36928998bf20b920fcf3a671048e18a6 315 SUPERFAMILY SSF111369 34 87 7.98E-5 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 SMART SM00062 29 227 3.3E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Gene3D G3DSA:3.40.190.10 241 330 9.1E-6 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Gene3D G3DSA:3.40.190.10 331 420 2.5E-9 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 SUPERFAMILY SSF53850 44 206 2.5E-26 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 SUPERFAMILY SSF55073 516 657 4.87E-27 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Gene3D G3DSA:3.30.70.270 506 665 9.7E-32 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 655 3.6E-26 T 29-03-2018 IPR000160 GGDEF domain AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 659 2.5E-28 T 29-03-2018 IPR000160 GGDEF domain AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Gene3D G3DSA:3.40.190.10 123 188 9.7E-8 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 SUPERFAMILY SSF53850 251 469 7.93E-22 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Gene3D G3DSA:3.40.190.10 40 122 2.6E-10 T 29-03-2018 AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 SMART SM00267 500 661 9.2E-21 T 29-03-2018 IPR000160 GGDEF domain AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 196 1.1E-19 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS17330 60e1326d2798fbd6b8b3b95199840b75 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 259 468 2.3E-16 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 SUPERFAMILY SSF69279 7 183 2.66E-57 T 29-03-2018 AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 8.3E-130 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 SUPERFAMILY SSF69349 444 683 1.73E-46 T 29-03-2018 AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 SUPERFAMILY SSF69279 200 364 8.16E-33 T 29-03-2018 AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 1.3E-199 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 SUPERFAMILY SSF69255 367 454 4.18E-32 T 29-03-2018 AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 4.6E-78 T 29-03-2018 AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 Gene3D G3DSA:2.40.50.230 372 454 7.7E-36 T 29-03-2018 IPR006531 Gp5 N-terminal AL539_RS20025 3b2302d0def14239ab2cf380a50e811d 692 Gene3D G3DSA:3.55.50.10 96 187 1.4E-30 T 29-03-2018 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 1.1E-87 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 SUPERFAMILY SSF53067 134 304 4.19E-42 T 29-03-2018 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 PIRSF PIRSF001267 1 497 2.2E-178 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 59.496 T 29-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 Gene3D G3DSA:3.30.420.150 123 301 2.6E-32 T 29-03-2018 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 Gene3D G3DSA:3.30.420.40 1 122 1.6E-37 T 29-03-2018 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 SUPERFAMILY SSF109604 309 495 2.59E-43 T 29-03-2018 AL539_RS11695 d0d8d10d816dcd94a3a097182c2be773 497 SUPERFAMILY SSF53067 9 129 2.91E-35 T 29-03-2018 AL539_RS08550 52b324ae6c010de1ab50d28ad0398a5e 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.6E-23 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS08550 52b324ae6c010de1ab50d28ad0398a5e 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 8.4E-17 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS08550 52b324ae6c010de1ab50d28ad0398a5e 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS08550 52b324ae6c010de1ab50d28ad0398a5e 331 SMART SM00382 43 241 7.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08550 52b324ae6c010de1ab50d28ad0398a5e 331 SUPERFAMILY SSF52540 9 262 4.5E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08550 52b324ae6c010de1ab50d28ad0398a5e 331 Gene3D G3DSA:3.40.50.300 7 331 4.8E-60 T 29-03-2018 AL539_RS08550 52b324ae6c010de1ab50d28ad0398a5e 331 Pfam PF00005 ABC transporter 35 192 1.8E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 PIRSF PIRSF000497 1 381 1.1E-174 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 11 133 2.1E-45 T 29-03-2018 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 233 382 1.45E-70 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 111 232 2.12E-51 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.024 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.7E-43 T 29-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 246 383 1.8E-47 T 29-03-2018 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 29-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 134 233 2.0E-42 T 29-03-2018 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 2.8E-197 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS09210 1ca178101fb0640c53393799a4e57026 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.8E-45 T 29-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL539_RS04965 2e5339c76f46f6cd941e9d5dc33fbdef 233 SUPERFAMILY SSF53098 138 215 3.22E-19 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS04965 2e5339c76f46f6cd941e9d5dc33fbdef 233 Pfam PF13276 HTH-like domain 63 109 6.6E-7 T 29-03-2018 IPR025948 HTH-like domain AL539_RS04965 2e5339c76f46f6cd941e9d5dc33fbdef 233 Gene3D G3DSA:3.30.420.10 126 228 1.9E-21 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS04965 2e5339c76f46f6cd941e9d5dc33fbdef 233 Pfam PF00665 Integrase core domain 139 215 1.2E-16 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL539_RS22230 e9aeee30808d36d7c0c6473324961ed3 378 SUPERFAMILY SSF110738 1 376 1.19E-139 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL539_RS22230 e9aeee30808d36d7c0c6473324961ed3 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.9E-157 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL539_RS22230 e9aeee30808d36d7c0c6473324961ed3 378 Gene3D G3DSA:3.90.1510.10 42 267 1.5E-91 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AL539_RS22230 e9aeee30808d36d7c0c6473324961ed3 378 PIRSF PIRSF006078 1 377 1.7E-133 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL539_RS22230 e9aeee30808d36d7c0c6473324961ed3 378 Gene3D G3DSA:3.20.20.390 268 374 9.6E-4 T 29-03-2018 AL539_RS22230 e9aeee30808d36d7c0c6473324961ed3 378 Pfam PF02595 Glycerate kinase family 3 374 1.4E-146 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL539_RS04110 032e992ebcca2bd54d3413ca62d115fd 232 SUPERFAMILY SSF55781 64 228 4.9E-25 T 29-03-2018 IPR029016 GAF domain-like AL539_RS04110 032e992ebcca2bd54d3413ca62d115fd 232 Pfam PF01614 Bacterial transcriptional regulator 127 226 7.3E-12 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL539_RS04110 032e992ebcca2bd54d3413ca62d115fd 232 Gene3D G3DSA:3.30.450.40 78 228 1.6E-23 T 29-03-2018 IPR029016 GAF domain-like AL539_RS04110 032e992ebcca2bd54d3413ca62d115fd 232 Pfam PF09339 IclR helix-turn-helix domain 10 59 3.8E-13 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL539_RS04110 032e992ebcca2bd54d3413ca62d115fd 232 SMART SM00346 8 97 2.5E-16 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL539_RS04110 032e992ebcca2bd54d3413ca62d115fd 232 Gene3D G3DSA:1.10.10.10 2 67 4.2E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04110 032e992ebcca2bd54d3413ca62d115fd 232 SUPERFAMILY SSF46785 8 75 5.47E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 SUPERFAMILY SSF88946 6 91 3.79E-24 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 Pfam PF04539 Sigma-70 region 3 100 161 2.3E-12 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 Pfam PF04542 Sigma-70 region 2 19 91 5.0E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 1.0E-86 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 SUPERFAMILY SSF88659 92 164 1.4E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 SUPERFAMILY SSF88659 155 239 8.41E-21 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 Pfam PF04545 Sigma-70, region 4 187 234 2.7E-19 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 PIRSF PIRSF000770 2 243 6.2E-40 T 29-03-2018 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 Gene3D G3DSA:1.10.10.10 173 243 4.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 Gene3D G3DSA:1.10.1740.10 3 89 2.4E-20 T 29-03-2018 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 Gene3D G3DSA:1.10.10.10 92 139 3.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 7.7E-33 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07320 ed91222b31bbd1c2c5c46119f51ed7b9 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 63.029 T 29-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL539_RS18135 d6e55dca628e0d1128b258fb759ceab8 107 SUPERFAMILY SSF50022 1 106 1.63E-34 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS18135 d6e55dca628e0d1128b258fb759ceab8 107 Gene3D G3DSA:2.102.10.10 1 107 5.3E-18 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL539_RS18135 d6e55dca628e0d1128b258fb759ceab8 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.2E-39 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL539_RS18135 d6e55dca628e0d1128b258fb759ceab8 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 5.1E-34 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 SMART SM00345 6 65 4.1E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 Gene3D G3DSA:1.10.10.10 2 67 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 Pfam PF07702 UTRA domain 86 224 2.4E-35 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 2.4E-116 T 29-03-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 Gene3D G3DSA:3.40.1410.10 81 231 1.9E-32 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 SUPERFAMILY SSF64288 53 228 1.0E-40 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 SMART SM00866 86 225 3.8E-31 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS21575 4a19b604dc5ff9a56c135180eda5e23d 234 SUPERFAMILY SSF46785 3 73 9.54E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02060 51d37572ae4b8e822f56b2b6e6a84d43 301 Pfam PF03956 Lysine exporter LysO 112 297 1.8E-52 T 29-03-2018 IPR005642 Lysine exporter LysO AL539_RS02060 51d37572ae4b8e822f56b2b6e6a84d43 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 2.0E-69 T 29-03-2018 IPR005642 Lysine exporter LysO AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 Gene3D G3DSA:1.10.40.60 217 282 1.9E-23 T 29-03-2018 AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 SUPERFAMILY SSF54523 36 100 5.02E-36 T 29-03-2018 AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 SUPERFAMILY SSF54523 285 325 5.02E-36 T 29-03-2018 AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 SUPERFAMILY SSF158544 215 282 6.28E-20 T 29-03-2018 AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 5.6E-88 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 PIRSF PIRSF002786 1 328 3.9E-67 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 SUPERFAMILY SSF158544 101 213 3.92E-32 T 29-03-2018 AL539_RS12925 c4ae8650518642c3ce9bededf73e00a7 336 Gene3D G3DSA:1.10.40.60 99 215 1.5E-29 T 29-03-2018 AL539_RS11150 1d53433897d150a354db9eab031d5281 377 SMART SM00116 265 313 0.0054 T 29-03-2018 IPR000644 CBS domain AL539_RS11150 1d53433897d150a354db9eab031d5281 377 SUPERFAMILY SSF54631 181 315 1.3E-27 T 29-03-2018 AL539_RS11150 1d53433897d150a354db9eab031d5281 377 Pfam PF01595 Domain of unknown function DUF21 9 177 1.7E-29 T 29-03-2018 IPR002550 Domain of unknown function DUF21 AL539_RS11150 1d53433897d150a354db9eab031d5281 377 Pfam PF00571 CBS domain 261 313 4.3E-7 T 29-03-2018 IPR000644 CBS domain AL539_RS11150 1d53433897d150a354db9eab031d5281 377 Gene3D G3DSA:3.20.20.70 142 360 1.7E-31 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 SUPERFAMILY SSF48150 304 452 8.55E-29 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Gene3D G3DSA:3.40.10.10 3 79 4.5E-27 T 29-03-2018 IPR035451 Ada-like domain AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 SMART SM01009 200 312 1.9E-30 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 SUPERFAMILY SSF57884 7 91 2.35E-34 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Gene3D G3DSA:1.10.340.30 312 413 2.5E-14 T 29-03-2018 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Pfam PF12833 Helix-turn-helix domain 112 190 1.5E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Gene3D G3DSA:3.30.310.20 200 311 2.7E-28 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 SMART SM00342 106 189 6.0E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 SUPERFAMILY SSF46689 144 191 6.72E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 319 437 4.8E-5 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Pfam PF06029 AlkA N-terminal domain 201 312 1.1E-32 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Gene3D G3DSA:1.10.10.60 144 192 1.7E-8 T 29-03-2018 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 SUPERFAMILY SSF55945 201 293 9.89E-26 T 29-03-2018 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Gene3D G3DSA:1.10.1670.10 416 455 1.6E-4 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Pfam PF02805 Metal binding domain of Ada 14 77 6.7E-30 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 SUPERFAMILY SSF46689 92 139 3.07E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22480 7259e22c504868a7fcc689f1cadd3287 455 Gene3D G3DSA:1.10.10.60 87 143 3.7E-10 T 29-03-2018 AL539_RS02925 8f4a513b2260e6db2cc97be4f14f53cd 121 SUPERFAMILY SSF54593 4 118 3.71E-16 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS02925 8f4a513b2260e6db2cc97be4f14f53cd 121 PIRSF PIRSF039020 1 121 7.8E-40 T 29-03-2018 IPR026275 Glyoxalase/dioxygenase/EhpR AL539_RS02925 8f4a513b2260e6db2cc97be4f14f53cd 121 Gene3D G3DSA:3.10.180.10 1 119 1.0E-13 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.51 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 Pfam PF13932 GidA associated domain 403 616 3.8E-76 T 29-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 Pfam PF01134 Glucose inhibited division protein A 8 398 1.8E-168 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.2E-293 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 Gene3D G3DSA:3.50.50.60 5 264 1.5E-76 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 SMART SM01228 546 617 1.4E-42 T 29-03-2018 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 SUPERFAMILY SSF51905 6 66 8.76E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12200 fc3320e8e45bb939c68998c76655cb4c 631 SUPERFAMILY SSF51905 97 261 8.76E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Gene3D G3DSA:2.40.30.10 206 299 9.8E-31 T 29-03-2018 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.6E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 SUPERFAMILY SSF52540 6 219 8.3E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Gene3D G3DSA:3.40.50.300 75 203 1.1E-31 T 29-03-2018 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Gene3D G3DSA:2.40.30.10 300 393 3.3E-33 T 29-03-2018 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 3.4E-230 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Gene3D G3DSA:3.40.50.300 2 74 1.6E-11 T 29-03-2018 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.41 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS10405 6609aaaf5cdec6217f8d294e80a7d58d 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.6E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 Gene3D G3DSA:3.20.20.60 483 796 1.7E-107 T 29-03-2018 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 SUPERFAMILY SSF51621 466 793 8.28E-99 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 SUPERFAMILY SSF56059 6 389 6.12E-108 T 29-03-2018 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 Gene3D G3DSA:3.30.470.20 199 362 6.4E-46 T 29-03-2018 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 SUPERFAMILY SSF52009 354 471 2.75E-34 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 764 8.9E-6 T 29-03-2018 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 699 714 8.9E-6 T 29-03-2018 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 716 731 8.9E-6 T 29-03-2018 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 786 2.8E-62 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 1.6E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 12 793 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 Gene3D G3DSA:3.30.1490.20 7 198 1.2E-54 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 PIRSF PIRSF000854 5 796 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 Gene3D G3DSA:3.50.30.10 363 482 2.5E-36 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL539_RS21020 d5e6f31931b6ba814630924d6c80f81a 796 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 351 1.4E-120 T 29-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AL539_RS07340 c0c342560003f712da3de868ba37b055 376 SUPERFAMILY SSF160544 250 355 1.05E-39 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_RS07340 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.1E-40 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS07340 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.1E-40 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS07340 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.1E-40 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS07340 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.1E-40 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS07340 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.1E-40 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS07340 c0c342560003f712da3de868ba37b055 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.9E-133 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AL539_RS07340 c0c342560003f712da3de868ba37b055 376 Gene3D G3DSA:3.40.1690.10 218 353 3.0E-56 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_RS07340 c0c342560003f712da3de868ba37b055 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.2E-120 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS25650 6819a1b7fe8c6d986facce0d1f230efe 404 SMART SM00833 252 372 3.6E-32 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_RS25650 6819a1b7fe8c6d986facce0d1f230efe 404 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 371 1.2E-17 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_RS25650 6819a1b7fe8c6d986facce0d1f230efe 404 Gene3D G3DSA:3.30.1220.10 240 373 7.9E-19 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_RS25650 6819a1b7fe8c6d986facce0d1f230efe 404 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 203 9.5E-27 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL539_RS25650 6819a1b7fe8c6d986facce0d1f230efe 404 SUPERFAMILY SSF52540 3 314 2.79E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25650 6819a1b7fe8c6d986facce0d1f230efe 404 Gene3D G3DSA:3.40.50.300 1 223 8.4E-29 T 29-03-2018 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 Pfam PF03477 ATP cone domain 6 92 1.2E-18 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 SUPERFAMILY SSF51998 222 739 8.24E-165 T 29-03-2018 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 3.2E-175 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.5E-36 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.5E-36 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.5E-36 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.5E-36 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.5E-36 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.5E-36 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 SUPERFAMILY SSF48168 10 221 3.14E-74 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 2.1E-114 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.3E-11 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05840 6ba15ee86b64452c4e09766119780cf8 760 Gene3D G3DSA:3.20.70.20 122 739 6.5E-148 T 29-03-2018 AL539_RS00765 4ebe81fa6c8f07cbf3349be4c8aeb944 291 Pfam PF01926 50S ribosome-binding GTPase 36 127 2.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS00765 4ebe81fa6c8f07cbf3349be4c8aeb944 291 SUPERFAMILY SSF52540 25 174 3.51E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00765 4ebe81fa6c8f07cbf3349be4c8aeb944 291 Gene3D G3DSA:3.40.50.300 86 273 6.8E-10 T 29-03-2018 AL539_RS00765 4ebe81fa6c8f07cbf3349be4c8aeb944 291 Gene3D G3DSA:3.40.50.300 2 85 2.1E-13 T 29-03-2018 AL539_RS19415 18ccfd1823bbff36959fc380c22bbf9c 316 Pfam PF01032 FecCD transport family 27 312 1.4E-53 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS19415 18ccfd1823bbff36959fc380c22bbf9c 316 SUPERFAMILY SSF81345 6 312 4.05E-57 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS19415 18ccfd1823bbff36959fc380c22bbf9c 316 Gene3D G3DSA:1.10.3470.10 6 315 1.3E-43 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS21620 08f5d545d3f4a822eacb156204bc9215 418 Gene3D G3DSA:3.40.50.1110 130 417 3.0E-54 T 29-03-2018 AL539_RS21620 08f5d545d3f4a822eacb156204bc9215 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 147 158 - T 29-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL539_RS21620 08f5d545d3f4a822eacb156204bc9215 418 SUPERFAMILY SSF52266 376 408 1.83E-22 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL539_RS21620 08f5d545d3f4a822eacb156204bc9215 418 SUPERFAMILY SSF52266 146 342 1.83E-22 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL539_RS21620 08f5d545d3f4a822eacb156204bc9215 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 405 5.2E-18 T 29-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 AL539_RS09815 935523abf1c3188ede4469c563576d6e 149 Gene3D G3DSA:3.40.50.10110 1 147 2.8E-39 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL539_RS09815 935523abf1c3188ede4469c563576d6e 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 4.4E-33 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL539_RS09815 935523abf1c3188ede4469c563576d6e 149 SUPERFAMILY SSF102400 1 145 9.68E-42 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL539_RS15190 895460f012edfbe2f3413d535ffe81e8 734 Gene3D G3DSA:1.10.3720.10 432 730 5.3E-33 T 29-03-2018 AL539_RS15190 895460f012edfbe2f3413d535ffe81e8 734 SUPERFAMILY SSF161098 419 529 2.22E-5 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS15190 895460f012edfbe2f3413d535ffe81e8 734 SUPERFAMILY SSF161098 502 720 7.85E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS15190 895460f012edfbe2f3413d535ffe81e8 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 2.7E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS15190 895460f012edfbe2f3413d535ffe81e8 734 Gene3D G3DSA:2.130.10.10 175 431 1.7E-6 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS16285 71fd57a77601db1469bf8096ebb1ab8f 212 Gene3D G3DSA:2.50.20.10 31 211 1.2E-47 T 29-03-2018 AL539_RS16285 71fd57a77601db1469bf8096ebb1ab8f 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 15 209 5.5E-36 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL539_RS16285 71fd57a77601db1469bf8096ebb1ab8f 212 SUPERFAMILY SSF89392 27 210 3.33E-48 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_RS16285 71fd57a77601db1469bf8096ebb1ab8f 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 12 210 26.326 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL539_RS16285 71fd57a77601db1469bf8096ebb1ab8f 212 Pfam PF03550 Outer membrane lipoprotein LolB 51 208 7.2E-42 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 375 408 66.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 335 368 62.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 215 248 9.3 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 178 211 320.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 255 288 0.15 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 295 328 20.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SUPERFAMILY SSF48452 101 248 1.14E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:1.25.40.10 199 253 5.3E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 640 7.7E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:1.10.10.10 306 347 0.075 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Pfam PF13424 Tetratricopeptide repeat 217 287 5.6E-9 T 29-03-2018 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:1.25.40.10 348 436 1.3E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SUPERFAMILY SSF48452 217 420 5.69E-21 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SMART SM00267 471 643 6.8E-37 T 29-03-2018 IPR000160 GGDEF domain AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:1.25.40.10 86 198 1.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 482 638 1.2E-35 T 29-03-2018 IPR000160 GGDEF domain AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:1.10.150.200 254 305 8.6E-9 T 29-03-2018 AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 SUPERFAMILY SSF55073 487 641 1.88E-34 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS04105 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:3.30.70.270 472 643 4.1E-38 T 29-03-2018 AL539_RS23385 0c74bfdf20ff3ba29b01dc9b7edecedb 373 Gene3D G3DSA:1.20.5.70 340 369 1.2E-15 T 29-03-2018 AL539_RS23385 0c74bfdf20ff3ba29b01dc9b7edecedb 373 Pfam PF02563 Polysaccharide biosynthesis/export protein 78 162 5.5E-26 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL539_RS23385 0c74bfdf20ff3ba29b01dc9b7edecedb 373 Pfam PF10531 SLBB domain 171 215 8.1E-10 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS23385 0c74bfdf20ff3ba29b01dc9b7edecedb 373 Pfam PF10531 SLBB domain 253 302 2.0E-6 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS23385 0c74bfdf20ff3ba29b01dc9b7edecedb 373 Gene3D G3DSA:3.10.560.10 248 339 4.1E-17 T 29-03-2018 AL539_RS23385 0c74bfdf20ff3ba29b01dc9b7edecedb 373 Gene3D G3DSA:3.10.560.10 158 247 7.1E-26 T 29-03-2018 AL539_RS23385 0c74bfdf20ff3ba29b01dc9b7edecedb 373 Gene3D G3DSA:3.30.1950.10 86 157 9.6E-24 T 29-03-2018 AL539_RS21260 ac03ca70c7aa8e24b857c68b5a0988ae 204 Gene3D G3DSA:2.40.160.20 5 204 2.7E-27 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS21260 ac03ca70c7aa8e24b857c68b5a0988ae 204 Pfam PF01389 OmpA-like transmembrane domain 22 204 2.5E-23 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL539_RS21260 ac03ca70c7aa8e24b857c68b5a0988ae 204 SUPERFAMILY SSF56925 21 204 1.36E-28 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS21100 bec50582df915c6a6b924387232b7b01 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 65 1.5E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS21100 bec50582df915c6a6b924387232b7b01 218 SUPERFAMILY SSF48498 92 207 3.56E-5 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS21100 bec50582df915c6a6b924387232b7b01 218 Gene3D G3DSA:1.10.10.60 4 60 1.8E-13 T 29-03-2018 AL539_RS21100 bec50582df915c6a6b924387232b7b01 218 Gene3D G3DSA:1.10.357.10 61 216 1.1E-23 T 29-03-2018 AL539_RS21100 bec50582df915c6a6b924387232b7b01 218 SUPERFAMILY SSF46689 9 85 4.51E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 SUPERFAMILY SSF53720 12 421 7.45E-72 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 Gene3D G3DSA:3.40.50.1980 18 217 6.8E-79 T 29-03-2018 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 Pfam PF00815 Histidinol dehydrogenase 14 420 6.6E-144 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 221 254 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 Gene3D G3DSA:3.40.50.1980 218 364 3.1E-59 T 29-03-2018 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 420 33.149 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 162 188 1.2E-60 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 1.2E-60 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 100 127 1.2E-60 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 192 217 1.2E-60 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 1.2E-60 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 25 49 1.2E-60 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 1.2E-60 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 25 419 9.8E-142 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS23145 c4b1d2990be8c30847bdd5a9cd200566 430 PIRSF PIRSF000099 4 423 3.8E-124 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 Pfam PF05036 Sporulation related domain 190 260 2.2E-11 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 Gene3D G3DSA:3.30.70.1070 192 264 6.2E-8 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.236 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 250 2.9E-47 T 29-03-2018 IPR012997 Rare lipoprotein A AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 SUPERFAMILY SSF110997 190 262 1.7E-12 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 SUPERFAMILY SSF50685 89 175 3.35E-11 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 Gene3D G3DSA:2.40.40.10 63 176 8.2E-27 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL539_RS16080 240757cfd54847cde8fd70a16626f6f4 267 Pfam PF03330 Lytic transglycolase 84 173 2.8E-28 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 Pfam PF00271 Helicase conserved C-terminal domain 219 325 7.5E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 SMART SM00487 15 211 1.7E-22 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 348 9.4E-114 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 Gene3D G3DSA:1.10.10.10 440 639 5.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 SUPERFAMILY SSF52540 60 338 5.01E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 Pfam PF00270 DEAD/DEAH box helicase 22 181 3.1E-15 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 Gene3D G3DSA:3.40.50.300 2 201 2.7E-33 T 29-03-2018 AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 SMART SM00490 245 326 6.4E-28 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 Pfam PF16124 RecQ zinc-binding 512 559 3.5E-8 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 29-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AL539_RS07915 d0e986d88865a77f641ef7632d6c3a26 641 Gene3D G3DSA:3.40.50.300 202 368 3.4E-36 T 29-03-2018 AL539_RS03375 5340b862c18f00b14750268f9e7b959f 126 SUPERFAMILY SSF47226 10 119 8.24E-23 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS03375 5340b862c18f00b14750268f9e7b959f 126 Gene3D G3DSA:1.20.120.160 3 123 4.5E-18 T 29-03-2018 AL539_RS03375 5340b862c18f00b14750268f9e7b959f 126 Pfam PF01627 Hpt domain 34 109 1.6E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS21150 e6dab507ef79d65966fab27a2742f56e 156 SUPERFAMILY SSF88697 2 155 1.49E-52 T 29-03-2018 IPR015947 PUA-like domain AL539_RS21150 e6dab507ef79d65966fab27a2742f56e 156 Pfam PF04266 ASCH domain 41 153 5.0E-23 T 29-03-2018 IPR007374 ASCH domain AL539_RS21150 e6dab507ef79d65966fab27a2742f56e 156 SMART SM01022 30 153 1.4E-34 T 29-03-2018 IPR007374 ASCH domain AL539_RS21150 e6dab507ef79d65966fab27a2742f56e 156 Gene3D G3DSA:3.10.400.10 7 153 3.4E-52 T 29-03-2018 AL539_RS21150 e6dab507ef79d65966fab27a2742f56e 156 PIRSF PIRSF021320 1 156 1.6E-48 T 29-03-2018 IPR009326 Protein of unknown function DUF984 AL539_RS17410 ecfd143846aaa93101f0cd090600f6f4 269 Pfam PF10972 Peptidoglycan-binding protein, CsiV 20 268 1.7E-65 T 29-03-2018 IPR021241 Peptidoglycan-binding protein, CsiV AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 7.7E-64 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 Gene3D G3DSA:3.30.390.30 337 462 5.2E-38 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 1.4E-150 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PIRSF PIRSF000350 1 468 1.3E-82 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 SUPERFAMILY SSF51905 3 337 2.06E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 29-03-2018 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 SUPERFAMILY SSF55424 343 466 7.04E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 Gene3D G3DSA:3.50.50.60 1 164 3.6E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS08705 f354f5cf67cb92e15a25e66089225326 475 Gene3D G3DSA:3.40.50.720 165 336 1.8E-29 T 29-03-2018 AL539_RS09965 d57939509557665a9695e6419288ecec 452 Gene3D G3DSA:3.10.580.10 135 262 1.7E-15 T 29-03-2018 AL539_RS09965 d57939509557665a9695e6419288ecec 452 Pfam PF03448 MgtE intracellular N domain 36 137 3.5E-26 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_RS09965 d57939509557665a9695e6419288ecec 452 SUPERFAMILY SSF158791 12 136 2.88E-30 T 29-03-2018 AL539_RS09965 d57939509557665a9695e6419288ecec 452 Pfam PF01769 Divalent cation transporter 323 444 2.9E-23 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS09965 d57939509557665a9695e6419288ecec 452 Gene3D G3DSA:1.10.357.20 279 452 1.0E-31 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS09965 d57939509557665a9695e6419288ecec 452 Gene3D G3DSA:1.25.60.10 5 134 3.2E-22 T 29-03-2018 AL539_RS09965 d57939509557665a9695e6419288ecec 452 SMART SM00924 36 139 7.6E-37 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_RS09965 d57939509557665a9695e6419288ecec 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 4.0E-87 T 29-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AL539_RS09965 d57939509557665a9695e6419288ecec 452 SUPERFAMILY SSF161093 280 450 1.44E-43 T 29-03-2018 AL539_RS09965 d57939509557665a9695e6419288ecec 452 Pfam PF00571 CBS domain 140 195 6.8E-4 T 29-03-2018 IPR000644 CBS domain AL539_RS09965 d57939509557665a9695e6419288ecec 452 Pfam PF00571 CBS domain 213 257 5.8E-4 T 29-03-2018 IPR000644 CBS domain AL539_RS09965 d57939509557665a9695e6419288ecec 452 SUPERFAMILY SSF54631 138 278 3.41E-26 T 29-03-2018 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 SUPERFAMILY SSF52540 32 222 1.19E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 Gene3D G3DSA:1.20.272.10 243 362 5.1E-19 T 29-03-2018 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 SUPERFAMILY SSF48019 243 361 6.04E-33 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.6E-44 T 29-03-2018 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 Gene3D G3DSA:3.40.50.300 1 166 6.3E-38 T 29-03-2018 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 SMART SM00382 37 179 9.1E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 1.2E-32 T 29-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 560 698 7.7E-50 T 29-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 Gene3D G3DSA:1.10.8.60 167 242 8.0E-19 T 29-03-2018 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.1E-132 T 29-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AL539_RS07000 fc10a189a92d2108d08b432607cf66d4 701 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 481 558 4.6E-22 T 29-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS18285 7ce6711cf42a3d72485f07e1018690e3 232 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18285 7ce6711cf42a3d72485f07e1018690e3 232 SUPERFAMILY SSF53681 1 116 1.79E-37 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18285 7ce6711cf42a3d72485f07e1018690e3 232 Gene3D G3DSA:3.40.50.1860 119 216 3.4E-27 T 29-03-2018 AL539_RS18285 7ce6711cf42a3d72485f07e1018690e3 232 SUPERFAMILY SSF53681 118 229 6.21E-35 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18285 7ce6711cf42a3d72485f07e1018690e3 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.7E-61 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS18285 7ce6711cf42a3d72485f07e1018690e3 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 2.4E-77 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AL539_RS18285 7ce6711cf42a3d72485f07e1018690e3 232 Gene3D G3DSA:3.40.50.1860 1 118 7.2E-31 T 29-03-2018 AL539_RS08415 f5afd1b2ce94c369ad267b3d5363c69f 151 Gene3D G3DSA:3.30.300.70 1 80 4.7E-28 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL539_RS08415 f5afd1b2ce94c369ad267b3d5363c69f 151 Gene3D G3DSA:2.30.30.180 88 148 7.0E-18 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL539_RS08415 f5afd1b2ce94c369ad267b3d5363c69f 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 2.0E-21 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL539_RS08415 f5afd1b2ce94c369ad267b3d5363c69f 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.535 T 29-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AL539_RS08415 f5afd1b2ce94c369ad267b3d5363c69f 151 Pfam PF02576 RimP N-terminal domain 13 83 5.2E-29 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL539_RS08415 f5afd1b2ce94c369ad267b3d5363c69f 151 SUPERFAMILY SSF75420 2 83 1.19E-25 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL539_RS08415 f5afd1b2ce94c369ad267b3d5363c69f 151 SUPERFAMILY SSF74942 84 151 4.18E-18 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 SUPERFAMILY SSF54980 364 428 1.87E-19 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.768 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.9E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.9E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.9E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.1E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 PIRSF PIRSF006809 3 423 1.2E-151 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.6E-28 T 29-03-2018 IPR032305 GTP-binding protein, middle domain AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 Gene3D G3DSA:3.40.50.300 230 374 1.3E-19 T 29-03-2018 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 SUPERFAMILY SSF52540 197 372 1.39E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 Gene3D G3DSA:3.40.50.300 165 229 3.7E-11 T 29-03-2018 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 7.2E-157 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AL539_RS10645 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 3.1E-31 T 29-03-2018 IPR025121 GTPase HflX, N-terminal AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 SUPERFAMILY SSF102735 1 130 3.53E-41 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 Gene3D G3DSA:1.10.3120.10 211 389 5.4E-49 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.3E-40 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.2E-144 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.2E-42 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.0E-12 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 SUPERFAMILY SSF109998 248 429 7.65E-49 T 29-03-2018 IPR027304 Trigger factor/SurA domain AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 SUPERFAMILY SSF54534 90 241 1.96E-36 T 29-03-2018 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 Gene3D G3DSA:3.30.70.1050 1 118 2.9E-36 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 Hamap MF_00303 Trigger factor [tig]. 1 418 22.024 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AL539_RS17125 7102f51e3e9d0a8df05c62589f5b0300 435 PIRSF PIRSF003095 1 434 2.0E-127 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AL539_RS15205 060e7b35532c9734cad847cde9dc1842 232 SUPERFAMILY SSF109755 10 225 9.84E-70 T 29-03-2018 AL539_RS15205 060e7b35532c9734cad847cde9dc1842 232 PIRSF PIRSF003107 4 223 4.6E-70 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL539_RS15205 060e7b35532c9734cad847cde9dc1842 232 Pfam PF01895 PhoU domain 23 108 3.2E-23 T 29-03-2018 IPR026022 PhoU domain AL539_RS15205 060e7b35532c9734cad847cde9dc1842 232 Pfam PF01895 PhoU domain 128 210 1.2E-16 T 29-03-2018 IPR026022 PhoU domain AL539_RS15205 060e7b35532c9734cad847cde9dc1842 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.4E-75 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL539_RS15205 060e7b35532c9734cad847cde9dc1842 232 Gene3D G3DSA:1.20.58.220 3 116 3.4E-28 T 29-03-2018 AL539_RS15205 060e7b35532c9734cad847cde9dc1842 232 Gene3D G3DSA:1.20.58.220 117 230 1.1E-27 T 29-03-2018 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 SUPERFAMILY SSF53659 392 709 3.95E-96 T 29-03-2018 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 PIRSF PIRSF006107 1 714 0.0 T 29-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 Gene3D G3DSA:3.40.1390.20 230 366 4.6E-27 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AL539_RS06595 4853ef978760da595cee43a022bdce38 714 SUPERFAMILY SSF52540 1 240 1.79E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06595 4853ef978760da595cee43a022bdce38 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.3E-132 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 SUPERFAMILY SSF75138 229 353 1.26E-23 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AL539_RS06595 4853ef978760da595cee43a022bdce38 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 2.6E-125 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 Pfam PF07085 DRTGG domain 233 344 5.2E-27 T 29-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 Gene3D G3DSA:3.40.50.300 1 229 1.9E-26 T 29-03-2018 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 Gene3D G3DSA:3.40.718.10 409 690 5.2E-65 T 29-03-2018 AL539_RS06595 4853ef978760da595cee43a022bdce38 714 Pfam PF13500 AAA domain 3 229 5.8E-51 T 29-03-2018 AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 Gene3D G3DSA:3.40.50.720 1 264 6.4E-44 T 29-03-2018 AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.5E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 9.6E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.6E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 9.6E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.6E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 Pfam PF00106 short chain dehydrogenase 3 190 9.2E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS20860 a5349270437e1249fe7d149d0f5838dc 267 SUPERFAMILY SSF51735 2 240 1.39E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 775 1.8E-15 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Gene3D G3DSA:3.50.50.60 102 243 9.6E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 29-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.5E-9 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 SUPERFAMILY SSF55124 503 630 1.74E-30 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Gene3D G3DSA:3.50.50.60 247 325 3.1E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Gene3D G3DSA:3.50.50.60 2 101 2.7E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.8E-15 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.8E-15 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.8E-15 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.8E-15 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-15 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 SUPERFAMILY SSF51905 144 310 6.91E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-8 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.8E-8 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.8E-8 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.8E-8 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Gene3D G3DSA:3.90.480.10 494 629 1.5E-8 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 2.4E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 SUPERFAMILY SSF51905 3 184 7.5E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 Gene3D G3DSA:3.30.413.10 630 818 9.9E-36 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 SUPERFAMILY SSF56014 634 809 2.49E-47 T 29-03-2018 AL539_RS18130 cedef25744304f39c9fade70ba9bbc64 854 PIRSF PIRSF037149 1 836 0.0 T 29-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 Pfam PF08402 TOBE domain 281 353 1.4E-11 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 SUPERFAMILY SSF50331 236 364 4.13E-31 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 Pfam PF00005 ABC transporter 20 161 5.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:3.40.50.300 1 239 7.5E-71 T 29-03-2018 AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:2.40.50.140 296 345 3.8E-13 T 29-03-2018 AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 SUPERFAMILY SSF52540 4 244 3.06E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:2.40.50.100 240 295 2.7E-7 T 29-03-2018 AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS24380 719c8cfae04d17e5d0330a4ddea8d075 372 SMART SM00382 28 210 2.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.184 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 SUPERFAMILY SSF52768 13 333 1.35E-83 T 29-03-2018 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 Gene3D G3DSA:3.40.800.10 5 336 2.9E-85 T 29-03-2018 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 2.8E-113 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 Pfam PF00491 Arginase family 47 325 2.2E-59 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 PIRSF PIRSF036979 25 333 5.8E-25 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AL539_RS02240 ec22db2053d0b19dfda77b7911d881b4 336 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AL539_RS16530 5cef2448e92803417a3f4397cd74a868 169 Gene3D G3DSA:2.70.70.10 9 169 8.4E-58 T 29-03-2018 AL539_RS16530 5cef2448e92803417a3f4397cd74a868 169 SUPERFAMILY SSF51261 18 166 3.31E-55 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS16530 5cef2448e92803417a3f4397cd74a868 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.1E-49 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL539_RS16530 5cef2448e92803417a3f4397cd74a868 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL539_RS16530 5cef2448e92803417a3f4397cd74a868 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.8E-50 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL539_RS13720 a35c95018f79397c2303d4a831b36e39 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 1.3E-106 T 29-03-2018 IPR021254 Protein of unknown function DUF2806 AL539_RS13720 a35c95018f79397c2303d4a831b36e39 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 8.1E-86 T 29-03-2018 IPR021254 Protein of unknown function DUF2806 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 SUPERFAMILY SSF52172 123 268 5.98E-32 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 SMART SM00267 244 404 7.8E-37 T 29-03-2018 IPR000160 GGDEF domain AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 SUPERFAMILY SSF55073 260 402 4.39E-35 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 Gene3D G3DSA:3.40.50.2300 121 254 1.2E-30 T 29-03-2018 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 SMART SM00448 3 115 3.4E-9 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 SMART SM00448 124 238 3.1E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 Gene3D G3DSA:3.40.50.2300 2 120 3.0E-18 T 29-03-2018 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 Pfam PF00072 Response regulator receiver domain 127 235 2.7E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 Pfam PF00072 Response regulator receiver domain 5 104 6.5E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 SUPERFAMILY SSF52172 4 122 3.13E-18 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 Gene3D G3DSA:3.30.70.270 255 405 1.6E-38 T 29-03-2018 AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 2.8E-29 T 29-03-2018 IPR000160 GGDEF domain AL539_RS07930 2e0fd152ea613740396fc4a8e2b15e48 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 402 2.3E-36 T 29-03-2018 IPR000160 GGDEF domain AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 594 2.4E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 Gene3D G3DSA:3.30.450.20 172 272 1.2E-14 T 29-03-2018 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 SMART SM00283 365 626 2.4E-72 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 Pfam PF02743 Cache domain 42 257 1.0E-23 T 29-03-2018 IPR033479 Double Cache domain 1 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 Gene3D G3DSA:1.10.287.1060 318 404 2.6E-5 T 29-03-2018 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 Pfam PF00672 HAMP domain 300 347 8.8E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 Gene3D G3DSA:3.30.450.20 40 171 2.4E-9 T 29-03-2018 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 SMART SM00304 296 350 1.6E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 SUPERFAMILY SSF58104 318 627 3.14E-77 T 29-03-2018 AL539_RS23060 7a99a3a5bdd30678d5d12ae41ffe5052 628 Gene3D G3DSA:1.10.287.950 405 628 2.9E-52 T 29-03-2018 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 2.6E-122 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 Pfam PF01494 FAD binding domain 4 336 2.0E-20 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 Gene3D G3DSA:3.50.50.60 2 316 6.8E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 6.2E-146 T 29-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.4E-10 T 29-03-2018 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.4E-10 T 29-03-2018 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.4E-10 T 29-03-2018 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.4E-10 T 29-03-2018 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 SUPERFAMILY SSF51905 268 382 6.48E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS09110 1713548e45b38ac21dfdc2226658150a 392 SUPERFAMILY SSF51905 3 178 6.48E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16560 8976a6b6447bf8dbe18ed0958a61263a 318 SMART SM00771 180 310 1.6E-73 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL539_RS16560 8976a6b6447bf8dbe18ed0958a61263a 318 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 183 318 9.0E-73 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL539_RS16560 8976a6b6447bf8dbe18ed0958a61263a 318 SUPERFAMILY SSF64383 182 314 1.83E-49 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL539_RS16560 8976a6b6447bf8dbe18ed0958a61263a 318 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 310 1.1E-88 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AL539_RS16560 8976a6b6447bf8dbe18ed0958a61263a 318 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 312 23.311 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AL539_RS16560 8976a6b6447bf8dbe18ed0958a61263a 318 Gene3D G3DSA:3.30.1400.10 182 313 4.0E-51 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL539_RS16560 8976a6b6447bf8dbe18ed0958a61263a 318 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 182 309 8.5E-48 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.6E-102 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Gene3D G3DSA:3.20.20.70 780 1208 8.5E-145 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 SUPERFAMILY SSF56235 13 429 7.18E-149 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 1.5E-152 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 3.6E-177 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 SUPERFAMILY SSF51395 434 1191 6.51E-250 T 29-03-2018 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 SUPERFAMILY SSF69336 1214 1465 1.31E-87 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Gene3D G3DSA:3.20.20.70 439 779 7.0E-81 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Gene3D G3DSA:3.60.20.10 13 438 1.0E-145 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Pfam PF01493 GXGXG motif 1236 1419 5.5E-74 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL539_RS14690 65b49db7551f0bb9a6eaf73bf48bc271 1487 Gene3D G3DSA:2.160.20.60 1212 1486 9.1E-96 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AL539_RS20210 eee62764eef402325f29282f1a874158 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 53.748 T 29-03-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 AL539_RS20210 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 181 200 3.6E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL539_RS20210 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 403 422 3.6E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL539_RS20210 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 350 370 3.6E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL539_RS20210 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 385 401 3.6E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL539_RS20210 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 100 117 3.6E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL539_RS20210 eee62764eef402325f29282f1a874158 467 Pfam PF00654 Voltage gated chloride channel 87 435 5.0E-95 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL539_RS20210 eee62764eef402325f29282f1a874158 467 SUPERFAMILY SSF81340 25 451 6.15E-114 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL539_RS20210 eee62764eef402325f29282f1a874158 467 Gene3D G3DSA:1.10.3080.10 16 459 4.4E-108 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AL539_RS19655 2e85b1b524e21a6d63e7523e88f79940 535 Pfam PF01039 Carboxyl transferase domain 48 525 6.8E-152 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL539_RS19655 2e85b1b524e21a6d63e7523e88f79940 535 Gene3D G3DSA:3.90.226.10 272 531 8.5E-69 T 29-03-2018 AL539_RS19655 2e85b1b524e21a6d63e7523e88f79940 535 SUPERFAMILY SSF52096 237 517 6.17E-86 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS19655 2e85b1b524e21a6d63e7523e88f79940 535 SUPERFAMILY SSF52096 24 267 6.74E-73 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS19655 2e85b1b524e21a6d63e7523e88f79940 535 Gene3D G3DSA:3.90.226.10 9 271 1.3E-70 T 29-03-2018 AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 Gene3D G3DSA:1.10.1060.10 107 241 2.3E-25 T 29-03-2018 AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 SUPERFAMILY SSF54292 5 106 1.1E-29 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 Gene3D G3DSA:3.10.20.30 1 106 3.4E-30 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 SUPERFAMILY SSF46548 107 226 1.73E-30 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 8.0E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 8.9E-95 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL539_RS10825 c63b2060bb6bc9e708bf34fc1aae81bc 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.7E-32 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 80 296 7.1E-19 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 Gene3D G3DSA:3.30.420.10 82 347 2.6E-41 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 SMART SM00486 153 558 1.8E-65 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 29-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 SUPERFAMILY SSF53098 4 389 1.52E-88 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 Gene3D G3DSA:3.90.1600.10 402 640 2.2E-49 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 Pfam PF00136 DNA polymerase family B 379 739 6.3E-41 T 29-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS05920 c39c493faf32fe3e9ea4a60addc99880 787 SUPERFAMILY SSF56672 385 780 1.84E-116 T 29-03-2018 AL539_RS11790 0066e7f2f47dd7f7527a7fcf8dbd40b3 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 8.7E-26 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL539_RS11790 0066e7f2f47dd7f7527a7fcf8dbd40b3 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 4.1E-181 T 29-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AL539_RS11790 0066e7f2f47dd7f7527a7fcf8dbd40b3 370 Gene3D G3DSA:3.20.20.70 15 368 1.2E-53 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS11790 0066e7f2f47dd7f7527a7fcf8dbd40b3 370 SUPERFAMILY SSF102114 38 362 1.57E-56 T 29-03-2018 AL539_RS11790 0066e7f2f47dd7f7527a7fcf8dbd40b3 370 SMART SM00876 256 359 6.1E-36 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL539_RS11790 0066e7f2f47dd7f7527a7fcf8dbd40b3 370 Pfam PF04055 Radical SAM superfamily 81 222 2.0E-10 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS08725 b7821bd208f2060804942fdf3d8b226b 183 SMART SM00644 18 169 1.6E-52 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL539_RS08725 b7821bd208f2060804942fdf3d8b226b 183 SUPERFAMILY SSF55846 4 181 3.4E-63 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL539_RS08725 b7821bd208f2060804942fdf3d8b226b 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 1.3E-26 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL539_RS08725 b7821bd208f2060804942fdf3d8b226b 183 Gene3D G3DSA:3.40.80.10 3 183 4.9E-47 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-9 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-9 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-9 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 SMART SM00344 8 115 3.0E-40 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 SUPERFAMILY SSF46785 7 68 2.22E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 Gene3D G3DSA:3.30.70.920 60 153 5.0E-23 T 29-03-2018 AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 Gene3D G3DSA:1.10.10.10 3 59 8.3E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS12580 b892c86ce34738a5da17c132fd99d3d4 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.0E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS08965 ec0e5e89b84315fc68222554f35dd5fe 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 42.524 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL539_RS08965 ec0e5e89b84315fc68222554f35dd5fe 235 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 1.2E-77 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL539_RS08965 ec0e5e89b84315fc68222554f35dd5fe 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 1.1E-77 T 29-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL539_RS08965 ec0e5e89b84315fc68222554f35dd5fe 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 29-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL539_RS08965 ec0e5e89b84315fc68222554f35dd5fe 235 SUPERFAMILY SSF53448 9 230 1.3E-62 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS08965 ec0e5e89b84315fc68222554f35dd5fe 235 Gene3D G3DSA:3.90.550.10 2 235 1.7E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS18050 5525ea4ced7713f1ee248ff9f1c7f1b0 543 SUPERFAMILY SSF58104 239 542 5.75E-74 T 29-03-2018 AL539_RS18050 5525ea4ced7713f1ee248ff9f1c7f1b0 543 SMART SM00304 211 265 3.1E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS18050 5525ea4ced7713f1ee248ff9f1c7f1b0 543 Gene3D G3DSA:1.10.287.950 32 314 4.0E-5 T 29-03-2018 AL539_RS18050 5525ea4ced7713f1ee248ff9f1c7f1b0 543 Gene3D G3DSA:1.10.287.950 315 543 1.3E-54 T 29-03-2018 AL539_RS18050 5525ea4ced7713f1ee248ff9f1c7f1b0 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 505 3.5E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS18050 5525ea4ced7713f1ee248ff9f1c7f1b0 543 SMART SM00283 273 541 2.5E-72 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS18050 5525ea4ced7713f1ee248ff9f1c7f1b0 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 170 1.1E-18 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL539_RS02810 3e47143a48cdd916c724642f3df53a77 498 SMART SM00052 256 494 1.4E-65 T 29-03-2018 IPR001633 EAL domain AL539_RS02810 3e47143a48cdd916c724642f3df53a77 498 Pfam PF00563 EAL domain 266 489 4.5E-53 T 29-03-2018 IPR001633 EAL domain AL539_RS02810 3e47143a48cdd916c724642f3df53a77 498 Gene3D G3DSA:3.20.20.450 253 498 5.5E-64 T 29-03-2018 IPR001633 EAL domain AL539_RS02810 3e47143a48cdd916c724642f3df53a77 498 SUPERFAMILY SSF141868 264 495 7.59E-64 T 29-03-2018 IPR001633 EAL domain AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 Gene3D G3DSA:3.30.300.30 469 605 7.4E-12 T 29-03-2018 AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 Gene3D G3DSA:2.30.38.10 391 467 5.1E-16 T 29-03-2018 AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 SUPERFAMILY SSF56801 12 299 1.57E-99 T 29-03-2018 AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 SUPERFAMILY SSF56801 340 606 1.57E-99 T 29-03-2018 AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 Gene3D G3DSA:3.40.50.980 14 200 2.0E-29 T 29-03-2018 AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 Gene3D G3DSA:3.40.50.980 201 390 2.9E-26 T 29-03-2018 AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS19805 eae497ddc52d0afad696cdc13214fd5f 650 Pfam PF00501 AMP-binding enzyme 21 471 1.1E-74 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS03290 f291d1f8da6bf0f478ca5882fbebfe3e 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.822 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AL539_RS03290 f291d1f8da6bf0f478ca5882fbebfe3e 194 SUPERFAMILY SSF52218 1 192 3.87E-51 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS03290 f291d1f8da6bf0f478ca5882fbebfe3e 194 Pfam PF02525 Flavodoxin-like fold 3 190 5.4E-44 T 29-03-2018 IPR003680 Flavodoxin-like fold AL539_RS03290 f291d1f8da6bf0f478ca5882fbebfe3e 194 Gene3D G3DSA:3.40.50.360 3 194 1.7E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS04765 2d461819ac9daf53f97a92a4fa92477a 137 Pfam PF06271 RDD family 15 129 7.5E-11 T 29-03-2018 IPR010432 RDD AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 Gene3D G3DSA:3.40.50.620 192 514 1.3E-85 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 PIRSF PIRSF001589 363 506 1.8E-27 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 PIRSF PIRSF001589 1 368 4.9E-105 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.0E-40 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 Gene3D G3DSA:3.60.20.10 2 191 5.8E-50 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 SUPERFAMILY SSF52402 208 482 2.35E-74 T 29-03-2018 AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 SUPERFAMILY SSF56235 1 196 3.26E-57 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 Pfam PF00733 Asparagine synthase 211 366 6.0E-56 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AL539_RS16685 5bad3e6747a75615747cc1a81fb55c6e 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 5.6E-116 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL539_RS13330 1a46e6cc68e594424b5f717a40d27a95 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 5.7E-73 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL539_RS13330 1a46e6cc68e594424b5f717a40d27a95 181 Gene3D G3DSA:2.60.120.10 1 181 3.0E-79 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS13330 1a46e6cc68e594424b5f717a40d27a95 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 3.0E-85 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL539_RS13330 1a46e6cc68e594424b5f717a40d27a95 181 SUPERFAMILY SSF51182 1 179 3.8E-77 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS13330 1a46e6cc68e594424b5f717a40d27a95 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 9.9E-83 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AL539_RS14170 6a18896c9f38f6a8486aac38cbadba5c 587 Gene3D G3DSA:3.40.1130.10 28 272 6.2E-21 T 29-03-2018 AL539_RS14170 6a18896c9f38f6a8486aac38cbadba5c 587 SUPERFAMILY SSF55729 313 496 7.42E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS14170 6a18896c9f38f6a8486aac38cbadba5c 587 SUPERFAMILY SSF69593 47 161 6.54E-8 T 29-03-2018 AL539_RS14170 6a18896c9f38f6a8486aac38cbadba5c 587 SMART SM00563 75 199 3.8E-4 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS14170 6a18896c9f38f6a8486aac38cbadba5c 587 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 2.8E-21 T 29-03-2018 AL539_RS14170 6a18896c9f38f6a8486aac38cbadba5c 587 Gene3D G3DSA:3.40.630.30 311 468 3.9E-19 T 29-03-2018 AL539_RS23745 eb4b0acbff57163bdc5d68bb8aa18f2a 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 4.4E-28 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL539_RS23745 eb4b0acbff57163bdc5d68bb8aa18f2a 146 Pfam PF02050 Flagellar FliJ protein 23 134 9.5E-7 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL539_RS01695 8117c86a5e7403a805d8ff4762b584dc 275 Gene3D G3DSA:3.40.50.720 1 129 2.4E-12 T 29-03-2018 AL539_RS01695 8117c86a5e7403a805d8ff4762b584dc 275 Gene3D G3DSA:3.90.25.10 138 275 1.0E-6 T 29-03-2018 AL539_RS01695 8117c86a5e7403a805d8ff4762b584dc 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 189 3.1E-15 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL539_RS01695 8117c86a5e7403a805d8ff4762b584dc 275 SUPERFAMILY SSF51735 8 268 1.43E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 Gene3D G3DSA:3.40.140.20 227 375 2.4E-55 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 3.0E-260 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 SUPERFAMILY SSF52335 7 197 1.23E-71 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 Gene3D G3DSA:3.40.50.1380 1 196 3.6E-78 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 Gene3D G3DSA:3.40.140.20 376 520 7.2E-54 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 Pfam PF02142 MGS-like domain 19 132 4.5E-31 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 PIRSF PIRSF000414 1 530 5.7E-229 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 5.2E-119 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 SMART SM00851 19 132 1.9E-61 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 SMART SM00798 137 462 4.3E-217 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.91 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS11130 7c0b39753431851a8438f1126d8b115d 530 SUPERFAMILY SSF53927 222 530 9.83E-131 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS22750 b6259d7f5e0a793827b459a4d5459bd9 197 SUPERFAMILY SSF50182 109 175 1.05E-11 T 29-03-2018 IPR010920 LSM domain AL539_RS22750 b6259d7f5e0a793827b459a4d5459bd9 197 Gene3D G3DSA:2.30.30.60 124 176 4.4E-12 T 29-03-2018 AL539_RS22750 b6259d7f5e0a793827b459a4d5459bd9 197 Pfam PF00924 Mechanosensitive ion channel 72 174 2.0E-11 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL539_RS03065 ea521fde5e9510af3372a9f12ccdd7ef 156 SUPERFAMILY SSF143744 11 148 3.27E-25 T 29-03-2018 AL539_RS03065 ea521fde5e9510af3372a9f12ccdd7ef 156 Pfam PF03928 Haem-degrading 20 145 1.7E-31 T 29-03-2018 IPR005624 Haem-degrading AL539_RS03065 ea521fde5e9510af3372a9f12ccdd7ef 156 PIRSF PIRSF008757 1 156 1.5E-52 T 29-03-2018 IPR010371 Uncharacterised protein family UPF0303 AL539_RS25160 02f7938512d3ec16b32264bfaaa3e634 743 Pfam PF00072 Response regulator receiver domain 620 734 7.3E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS25160 02f7938512d3ec16b32264bfaaa3e634 743 Gene3D G3DSA:3.40.50.2300 603 743 3.4E-33 T 29-03-2018 AL539_RS25160 02f7938512d3ec16b32264bfaaa3e634 743 Gene3D G3DSA:3.40.50.2300 473 580 0.12 T 29-03-2018 AL539_RS25160 02f7938512d3ec16b32264bfaaa3e634 743 SUPERFAMILY SSF52172 617 737 3.13E-30 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS25160 02f7938512d3ec16b32264bfaaa3e634 743 Gene3D G3DSA:3.30.565.10 283 472 0.0011 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS25160 02f7938512d3ec16b32264bfaaa3e634 743 SMART SM00448 617 733 2.2E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS04435 fae7f64810b7a9778aeb84ff5df95e65 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 7.8E-32 T 29-03-2018 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 AL539_RS04435 fae7f64810b7a9778aeb84ff5df95e65 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.9E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS04435 fae7f64810b7a9778aeb84ff5df95e65 88 PIRSF PIRSF004669 1 88 3.5E-26 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS04435 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.0E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS04435 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.0E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS04435 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.0E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 2.7E-14 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 6.4E-226 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 PIRSF PIRSF001373 3 521 3.3E-260 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 Pfam PF00425 chorismate binding enzyme 246 506 1.6E-84 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 Gene3D G3DSA:3.60.120.10 6 521 1.2E-159 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.3E-22 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.3E-22 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.3E-22 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.3E-22 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05965 905aac58c4f7e45f8d717d9ffa6a2d43 521 SUPERFAMILY SSF56322 16 518 1.16E-157 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.26 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Gene3D G3DSA:1.10.8.10 14 101 1.1E-9 T 29-03-2018 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 SUPERFAMILY SSF53335 16 294 1.64E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 5.8E-139 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Pfam PF05175 Methyltransferase small domain 134 216 6.5E-18 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 1.3E-97 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 PIRSF PIRSF037167 2 307 1.7E-150 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL539_RS07130 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Gene3D G3DSA:3.40.50.150 102 279 1.3E-34 T 29-03-2018 AL539_RS06405 6a2e53ecf7e4a87c8cbba92018145874 338 Gene3D G3DSA:3.30.160.60 303 337 9.4E-16 T 29-03-2018 AL539_RS06405 6a2e53ecf7e4a87c8cbba92018145874 338 Gene3D G3DSA:3.30.160.60 75 109 1.3E-10 T 29-03-2018 AL539_RS06405 6a2e53ecf7e4a87c8cbba92018145874 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.423 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AL539_RS06405 6a2e53ecf7e4a87c8cbba92018145874 338 Pfam PF02618 YceG-like family 43 328 3.2E-83 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AL539_RS06405 6a2e53ecf7e4a87c8cbba92018145874 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 336 4.0E-104 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 SUPERFAMILY SSF53623 97 308 1.57E-53 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 Pfam PF08245 Mur ligase middle domain 108 291 1.4E-22 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.2E-257 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 1.0E-10 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 SUPERFAMILY SSF53244 311 448 3.82E-37 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 Gene3D G3DSA:3.40.50.720 1 90 8.9E-12 T 29-03-2018 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.189 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 2.9E-18 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 SUPERFAMILY SSF51984 1 89 1.14E-22 T 29-03-2018 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 Gene3D G3DSA:3.40.1190.10 91 313 2.6E-42 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS13845 78674713c2bd9fbb58d786ff042d8d98 452 Gene3D G3DSA:3.90.190.20 314 452 2.6E-26 T 29-03-2018 AL539_RS20630 cb257109e1c2594ec29a82222d9fe744 425 Gene3D G3DSA:3.20.20.140 70 362 4.4E-40 T 29-03-2018 AL539_RS20630 cb257109e1c2594ec29a82222d9fe744 425 SUPERFAMILY SSF51556 54 372 1.31E-105 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS20630 cb257109e1c2594ec29a82222d9fe744 425 Pfam PF07969 Amidohydrolase family 43 403 3.3E-55 T 29-03-2018 IPR013108 Amidohydrolase 3 AL539_RS20630 cb257109e1c2594ec29a82222d9fe744 425 SUPERFAMILY SSF51338 1 76 2.64E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS20630 cb257109e1c2594ec29a82222d9fe744 425 Gene3D G3DSA:2.30.40.10 1 69 2.3E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 Pfam PF03466 LysR substrate binding domain 91 292 5.2E-40 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 Gene3D G3DSA:3.40.190.10 91 180 2.8E-19 T 29-03-2018 AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 SUPERFAMILY SSF53850 91 322 1.09E-42 T 29-03-2018 AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 Gene3D G3DSA:3.40.190.10 181 267 1.9E-23 T 29-03-2018 AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 Gene3D G3DSA:1.10.10.10 1 85 1.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01455 af95e94fcf53534ffc08052e3b50265a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 SMART SM00382 208 351 1.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 Pfam PF00158 Sigma-54 interaction domain 188 354 2.5E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:1.10.8.60 361 426 2.4E-18 T 29-03-2018 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:3.30.450.40 4 185 1.6E-19 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 SUPERFAMILY SSF52540 187 421 4.11E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 SUPERFAMILY SSF46689 461 509 2.06E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 SUPERFAMILY SSF55781 7 167 1.68E-17 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 SMART SM00065 20 168 5.3E-11 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:3.40.50.300 186 360 1.2E-28 T 29-03-2018 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 Pfam PF01590 GAF domain 24 154 2.9E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:1.10.10.60 427 510 2.5E-9 T 29-03-2018 AL539_RS24275 77c747df38f27994ed0ecd8947b9bb3c 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS13955 69bb4eb7c07302618c244fc5655f4f7d 268 SUPERFAMILY SSF56300 3 252 3.04E-58 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS13955 69bb4eb7c07302618c244fc5655f4f7d 268 PIRSF PIRSF000903 1 268 8.0E-123 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL539_RS13955 69bb4eb7c07302618c244fc5655f4f7d 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 47.103 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL539_RS13955 69bb4eb7c07302618c244fc5655f4f7d 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 1.9E-119 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL539_RS13955 69bb4eb7c07302618c244fc5655f4f7d 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 127 1.2E-14 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS13955 69bb4eb7c07302618c244fc5655f4f7d 268 Gene3D G3DSA:3.60.21.10 2 267 6.3E-49 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS11800 dd040e5ff08479e481d0090d031c1d6f 84 Gene3D G3DSA:3.10.20.30 19 84 7.2E-19 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS11800 dd040e5ff08479e481d0090d031c1d6f 84 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 21 84 6.1E-16 T 29-03-2018 IPR010035 ThiS, thiamine-biosynthesis AL539_RS11800 dd040e5ff08479e481d0090d031c1d6f 84 Pfam PF02597 ThiS family 25 84 1.5E-12 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AL539_RS11800 dd040e5ff08479e481d0090d031c1d6f 84 SUPERFAMILY SSF54285 19 84 1.19E-14 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL539_RS18370 bc7301b9e7bf4f79871b5804054f7696 229 SUPERFAMILY SSF161098 6 217 1.96E-48 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS18370 bc7301b9e7bf4f79871b5804054f7696 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 1.1E-71 T 29-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AL539_RS18370 bc7301b9e7bf4f79871b5804054f7696 229 Gene3D G3DSA:1.10.3720.10 5 225 8.4E-36 T 29-03-2018 AL539_RS18370 bc7301b9e7bf4f79871b5804054f7696 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 214 6.0E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS05080 09f0cc312fdd54b50f0873a23faa2b34 119 Pfam PF07653 Variant SH3 domain 9 63 4.2E-6 T 29-03-2018 IPR011511 Variant SH3 domain AL539_RS05080 09f0cc312fdd54b50f0873a23faa2b34 119 PIRSF PIRSF034961 7 119 1.6E-27 T 29-03-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 AL539_RS05080 09f0cc312fdd54b50f0873a23faa2b34 119 Gene3D G3DSA:2.30.30.40 73 119 1.0E-4 T 29-03-2018 AL539_RS05080 09f0cc312fdd54b50f0873a23faa2b34 119 SUPERFAMILY SSF50044 8 66 1.23E-7 T 29-03-2018 IPR001452 SH3 domain GO:0005515 AL539_RS05080 09f0cc312fdd54b50f0873a23faa2b34 119 Gene3D G3DSA:2.30.30.40 7 70 2.5E-6 T 29-03-2018 AL539_RS05080 09f0cc312fdd54b50f0873a23faa2b34 119 SUPERFAMILY SSF50044 75 117 4.62E-6 T 29-03-2018 IPR001452 SH3 domain GO:0005515 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 8.8E-16 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 SUPERFAMILY SSF51735 448 622 1.61E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 Gene3D G3DSA:3.40.50.720 447 621 2.5E-23 T 29-03-2018 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 8.5E-66 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 SUPERFAMILY SSF55347 600 783 1.24E-44 T 29-03-2018 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 Pfam PF00742 Homoserine dehydrogenase 600 795 7.4E-43 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 Gene3D G3DSA:3.30.360.10 622 779 8.2E-50 T 29-03-2018 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 Gene3D G3DSA:3.40.1160.10 2 276 9.9E-46 T 29-03-2018 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 SUPERFAMILY SSF53633 5 291 1.31E-57 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 PIRSF PIRSF000727 5 802 3.5E-290 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS10375 781ddd91c6db73763d8815652fb48491 802 Pfam PF00696 Amino acid kinase family 5 273 8.0E-44 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 Gene3D G3DSA:3.40.50.1170 1 211 5.5E-87 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 Pfam PF00710 Asparaginase, N-terminal 5 191 1.9E-67 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 PIRSF PIRSF500176 2 333 1.0E-109 T 29-03-2018 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 SMART SM00870 5 324 2.8E-141 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 PIRSF PIRSF001220 1 335 1.2E-95 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 Gene3D G3DSA:3.40.50.40 212 337 2.7E-38 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.7E-117 T 29-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 SUPERFAMILY SSF53774 3 336 3.4E-115 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL539_RS06890 93e1981a00279bc052ff2c234b9e5ab1 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AL539_RS14545 6abd1ccb28b9a627455757446732317d 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 102 1.8E-25 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL539_RS14545 6abd1ccb28b9a627455757446732317d 105 Pfam PF04999 Cell division protein FtsL 8 103 8.1E-36 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL539_RS14545 6abd1ccb28b9a627455757446732317d 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.206 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AL539_RS16760 ef0595d0e14b9a83eaa286a62729e5f1 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 1.4E-59 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL539_RS16760 ef0595d0e14b9a83eaa286a62729e5f1 252 Gene3D G3DSA:3.40.1390.30 110 223 7.4E-32 T 29-03-2018 AL539_RS16760 ef0595d0e14b9a83eaa286a62729e5f1 252 Gene3D G3DSA:3.40.1390.30 1 109 1.9E-26 T 29-03-2018 AL539_RS16760 ef0595d0e14b9a83eaa286a62729e5f1 252 SUPERFAMILY SSF102705 1 251 6.67E-83 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL539_RS16760 ef0595d0e14b9a83eaa286a62729e5f1 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 3.9E-70 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL539_RS15240 86b8f01e44e5d750380e74724a864d7b 149 SUPERFAMILY SSF54631 1 132 8.46E-32 T 29-03-2018 AL539_RS15240 86b8f01e44e5d750380e74724a864d7b 149 Gene3D G3DSA:3.10.580.10 1 149 6.0E-30 T 29-03-2018 AL539_RS15240 86b8f01e44e5d750380e74724a864d7b 149 SMART SM00116 84 131 1.2E-4 T 29-03-2018 IPR000644 CBS domain AL539_RS15240 86b8f01e44e5d750380e74724a864d7b 149 SMART SM00116 11 59 2.2E-9 T 29-03-2018 IPR000644 CBS domain AL539_RS15240 86b8f01e44e5d750380e74724a864d7b 149 Pfam PF00571 CBS domain 79 127 2.5E-8 T 29-03-2018 IPR000644 CBS domain AL539_RS15240 86b8f01e44e5d750380e74724a864d7b 149 Pfam PF00571 CBS domain 4 58 1.0E-12 T 29-03-2018 IPR000644 CBS domain AL539_RS07520 9a10c8c3d7d9232d65bdf5764d91815b 339 PIRSF PIRSF026343 4 339 4.0E-118 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC AL539_RS07520 9a10c8c3d7d9232d65bdf5764d91815b 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 33.256 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC AL539_RS07520 9a10c8c3d7d9232d65bdf5764d91815b 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 3.3E-103 T 29-03-2018 IPR010653 NlpB/DapX lipoprotein AL539_RS18875 646737a119dead506147b087810cf434 372 PIRSF PIRSF006487 1 372 5.2E-80 T 29-03-2018 AL539_RS18875 646737a119dead506147b087810cf434 372 SUPERFAMILY SSF101790 279 371 1.16E-25 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AL539_RS18875 646737a119dead506147b087810cf434 372 Gene3D G3DSA:2.40.30.110 285 372 5.7E-23 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL539_RS18875 646737a119dead506147b087810cf434 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 4.9E-22 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL539_RS18875 646737a119dead506147b087810cf434 372 SUPERFAMILY SSF103025 4 281 1.1E-89 T 29-03-2018 AL539_RS18875 646737a119dead506147b087810cf434 372 Gene3D G3DSA:4.10.1250.10 233 281 3.6E-20 T 29-03-2018 AL539_RS18875 646737a119dead506147b087810cf434 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 3.6E-106 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL539_RS18875 646737a119dead506147b087810cf434 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 1.8E-87 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AL539_RS18875 646737a119dead506147b087810cf434 372 Gene3D G3DSA:3.30.1360.120 133 232 3.1E-27 T 29-03-2018 AL539_RS18875 646737a119dead506147b087810cf434 372 Gene3D G3DSA:3.30.1360.120 4 132 7.0E-33 T 29-03-2018 AL539_RS04775 84da35acff9255b085d253d4d5fb30d8 133 Pfam PF09413 Putative prokaryotic signal transducing protein 4 65 3.0E-11 T 29-03-2018 IPR018551 Domain of unknown function DUF2007 AL539_RS04775 84da35acff9255b085d253d4d5fb30d8 133 SUPERFAMILY SSF54913 4 66 2.22E-8 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_RS04775 84da35acff9255b085d253d4d5fb30d8 133 Gene3D G3DSA:3.30.70.790 2 72 1.5E-15 T 29-03-2018 AL539_RS02395 74520d3b630eb163b95521d13283bad7 177 SUPERFAMILY SSF52540 4 176 3.09E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02395 74520d3b630eb163b95521d13283bad7 177 Gene3D G3DSA:3.40.50.300 3 176 2.2E-59 T 29-03-2018 AL539_RS02395 74520d3b630eb163b95521d13283bad7 177 PIRSF PIRSF006135 1 177 2.8E-54 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02395 74520d3b630eb163b95521d13283bad7 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 6.5E-59 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS12045 d6e38a6c04efa945be29fb16a1f53671 270 Pfam PF07070 SpoOM protein 6 221 1.3E-76 T 29-03-2018 IPR009776 Sporulation stage 0, protein M AL539_RS08440 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.40.120.10 157 270 2.7E-32 T 29-03-2018 AL539_RS08440 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF53738 4 182 8.24E-49 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 3.1E-12 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 3.8E-18 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.30.310.50 375 446 5.7E-18 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.6E-30 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF55957 359 444 7.33E-21 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF53738 157 257 1.1E-28 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF53738 259 365 8.24E-29 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.40.120.10 4 155 1.1E-49 T 29-03-2018 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.82 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 4.1E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 4.1E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 4.1E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.3E-46 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.8E-202 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08440 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.40.120.10 271 374 2.0E-26 T 29-03-2018 AL539_RS24435 2000aad0c6e626a7ec43eb4272e56eec 322 Gene3D G3DSA:3.40.50.1980 163 319 3.8E-31 T 29-03-2018 AL539_RS24435 2000aad0c6e626a7ec43eb4272e56eec 322 Pfam PF01497 Periplasmic binding protein 59 297 1.1E-29 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL539_RS24435 2000aad0c6e626a7ec43eb4272e56eec 322 SUPERFAMILY SSF53807 39 307 1.02E-61 T 29-03-2018 AL539_RS24435 2000aad0c6e626a7ec43eb4272e56eec 322 Gene3D G3DSA:3.40.50.1980 38 162 4.5E-22 T 29-03-2018 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.1E-104 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.0E-16 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 Gene3D G3DSA:3.30.930.10 131 586 1.9E-100 T 29-03-2018 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.291 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 Pfam PF02938 GAD domain 307 406 4.5E-30 T 29-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 SUPERFAMILY SSF55681 420 583 6.32E-102 T 29-03-2018 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 SUPERFAMILY SSF55681 108 287 6.32E-102 T 29-03-2018 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 Gene3D G3DSA:2.40.50.140 1 107 7.0E-27 T 29-03-2018 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 SUPERFAMILY SSF50249 1 105 4.57E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 3.2E-266 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL539_RS17760 e08a608ddc4753aa7317ad65de3c9c4e 592 SUPERFAMILY SSF55261 288 419 3.43E-46 T 29-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AL539_RS19285 b71a8788d3adbff82375e651c7f51098 356 Gene3D G3DSA:3.40.50.410 100 330 2.0E-44 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS19285 b71a8788d3adbff82375e651c7f51098 356 Pfam PF00092 von Willebrand factor type A domain 107 297 6.6E-26 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS19285 b71a8788d3adbff82375e651c7f51098 356 SMART SM00327 105 306 2.3E-24 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS19285 b71a8788d3adbff82375e651c7f51098 356 SUPERFAMILY SSF53300 103 302 1.28E-35 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 SUPERFAMILY SSF52402 4 182 6.21E-48 T 29-03-2018 AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 PIRSF PIRSF000089 1 308 4.8E-109 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 8.1E-37 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 SUPERFAMILY SSF52467 186 308 4.28E-49 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 Gene3D G3DSA:3.40.50.1220 191 308 7.8E-61 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 Pfam PF01012 Electron transfer flavoprotein domain 4 161 6.3E-36 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 Gene3D G3DSA:3.40.50.620 1 190 1.6E-36 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 SMART SM00893 3 186 5.9E-34 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL539_RS19830 755419f603cebf9041a4572ee77f953d 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AL539_RS20660 3fe6901bdc7bbd0c00f62dac359a72cd 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 7.4E-75 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS20660 3fe6901bdc7bbd0c00f62dac359a72cd 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.3E-77 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS20660 3fe6901bdc7bbd0c00f62dac359a72cd 218 SUPERFAMILY SSF55821 10 213 2.52E-80 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS20660 3fe6901bdc7bbd0c00f62dac359a72cd 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 41.962 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS20660 3fe6901bdc7bbd0c00f62dac359a72cd 218 Gene3D G3DSA:3.90.870.10 5 218 3.3E-85 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 SMART SM00382 32 215 2.0E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 Pfam PF08402 TOBE domain 279 354 7.0E-5 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 SUPERFAMILY SSF50331 240 357 4.08E-12 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 2.6E-163 T 29-03-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 SUPERFAMILY SSF52540 8 247 3.99E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 Pfam PF00005 ABC transporter 23 165 3.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 Gene3D G3DSA:3.40.50.300 1 244 1.3E-75 T 29-03-2018 AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 Gene3D G3DSA:2.40.50.100 245 291 3.4E-5 T 29-03-2018 AL539_RS21585 b742675737a965ff61ba5f9a302d3d52 368 Gene3D G3DSA:2.40.50.140 292 350 0.0094 T 29-03-2018 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 5.7E-124 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 Pfam PF04055 Radical SAM superfamily 50 199 3.5E-14 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 SMART SM00876 220 312 2.3E-45 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 SUPERFAMILY SSF102114 5 310 3.66E-88 T 29-03-2018 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 SMART SM00729 43 255 1.1E-40 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 4.8E-20 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 PIRSF PIRSF001619 1 319 1.7E-137 T 29-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.501 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL539_RS01515 084967d9263c81bad159499e2e49d0c7 350 Gene3D G3DSA:3.20.20.70 4 315 8.4E-55 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 3.2E-9 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 3.2E-9 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 3.2E-9 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 11 229 2.6E-46 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 29-03-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 Gene3D G3DSA:1.10.800.10 1 243 9.0E-90 T 29-03-2018 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 SUPERFAMILY SSF56534 3 234 1.22E-97 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL539_RS25240 49bfeb94501bad7ea8db8a7b2a702c33 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 14 238 4.0E-94 T 29-03-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1034 1.1E-242 T 29-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 Gene3D G3DSA:3.40.309.10 827 1017 4.6E-45 T 29-03-2018 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 SUPERFAMILY SSF53720 558 1034 5.5E-126 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 PIRSF PIRSF000197 3 1042 0.0 T 29-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 Pfam PF00171 Aldehyde dehydrogenase family 585 1034 1.2E-118 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 SUPERFAMILY SSF81935 17 188 1.96E-63 T 29-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 2.2E-45 T 29-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 Gene3D G3DSA:3.40.605.10 537 826 4.8E-78 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 SUPERFAMILY SSF51730 190 532 3.92E-116 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 Gene3D G3DSA:3.20.20.220 17 108 4.9E-12 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 Gene3D G3DSA:3.20.20.220 109 527 2.6E-107 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AL539_RS22800 79d59ef2e41d966c7932ca89be1af070 1043 Pfam PF01619 Proline dehydrogenase 197 490 1.2E-93 T 29-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AL539_RS06385 7b897ad4f0270e919f2623eea79a4ae0 476 Gene3D G3DSA:3.30.1360.60 398 472 3.0E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS06385 7b897ad4f0270e919f2623eea79a4ae0 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.3E-74 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS06385 7b897ad4f0270e919f2623eea79a4ae0 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS06385 7b897ad4f0270e919f2623eea79a4ae0 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS06385 7b897ad4f0270e919f2623eea79a4ae0 476 SUPERFAMILY SSF55604 402 472 3.01E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS06385 7b897ad4f0270e919f2623eea79a4ae0 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 1.7E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS06385 7b897ad4f0270e919f2623eea79a4ae0 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 3.1E-196 T 29-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 AL539_RS17995 9f339c2baa259b192fbff41eefdeb414 334 Gene3D G3DSA:3.40.640.10 16 246 3.3E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS17995 9f339c2baa259b192fbff41eefdeb414 334 Pfam PF01212 Beta-eliminating lyase 2 283 4.2E-100 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL539_RS17995 9f339c2baa259b192fbff41eefdeb414 334 SUPERFAMILY SSF53383 1 332 1.75E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS17995 9f339c2baa259b192fbff41eefdeb414 334 PIRSF PIRSF017617 1 334 2.8E-133 T 29-03-2018 IPR023603 Threonine aldolase AL539_RS17995 9f339c2baa259b192fbff41eefdeb414 334 Gene3D G3DSA:3.90.1150.10 247 334 8.9E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 SUPERFAMILY SSF56024 244 425 3.4E-27 T 29-03-2018 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 SUPERFAMILY SSF56024 9 182 1.57E-27 T 29-03-2018 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 Gene3D G3DSA:3.30.870.10 242 412 4.6E-23 T 29-03-2018 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 SMART SM00155 126 152 5.3E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 SMART SM00155 347 374 0.0083 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 Gene3D G3DSA:3.30.870.10 11 236 9.0E-20 T 29-03-2018 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 PIRSF PIRSF000850 3 446 1.1E-213 T 29-03-2018 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 Pfam PF13091 PLD-like domain 34 146 3.3E-7 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS11275 06487c9a85f45a39467c52e8764b7ed8 446 Pfam PF13091 PLD-like domain 251 402 6.7E-25 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS24880 7ad9a22722da54c3b1cde4a0cadb675c 179 Pfam PF08534 Redoxin 8 148 9.9E-20 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL539_RS24880 7ad9a22722da54c3b1cde4a0cadb675c 179 Gene3D G3DSA:3.40.30.10 1 159 8.3E-23 T 29-03-2018 AL539_RS24880 7ad9a22722da54c3b1cde4a0cadb675c 179 SUPERFAMILY SSF52833 7 176 1.83E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS00655 4cb3bb33b92883410cac5fda7716274c 297 Gene3D G3DSA:3.50.14.10 1 189 1.6E-42 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AL539_RS00655 4cb3bb33b92883410cac5fda7716274c 297 Gene3D G3DSA:3.50.14.10 190 257 3.5E-6 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AL539_RS00655 4cb3bb33b92883410cac5fda7716274c 297 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 4 270 5.7E-57 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AL539_RS00655 4cb3bb33b92883410cac5fda7716274c 297 SUPERFAMILY SSF56596 3 279 1.57E-54 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AL539_RS12475 d1b471fa42368d2aea81fb3918c80151 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 203 2.7E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS12475 d1b471fa42368d2aea81fb3918c80151 241 SUPERFAMILY SSF56784 3 237 8.27E-40 T 29-03-2018 IPR023214 HAD-like domain AL539_RS12475 d1b471fa42368d2aea81fb3918c80151 241 Gene3D G3DSA:3.40.50.1000 2 241 6.4E-32 T 29-03-2018 IPR023214 HAD-like domain AL539_RS12475 d1b471fa42368d2aea81fb3918c80151 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 6.5E-22 T 29-03-2018 IPR023214 HAD-like domain AL539_RS12475 d1b471fa42368d2aea81fb3918c80151 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 111 209 1.6E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.4E-250 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 1.5E-99 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.9 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 Gene3D G3DSA:1.10.560.10 1 186 1.4E-42 T 29-03-2018 IPR027413 GroEL-like equatorial domain AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 SUPERFAMILY SSF54849 137 203 7.55E-25 T 29-03-2018 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 SUPERFAMILY SSF52029 185 376 3.31E-79 T 29-03-2018 IPR027409 GroEL-like apical domain AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 Gene3D G3DSA:1.10.560.10 373 516 6.1E-25 T 29-03-2018 IPR027413 GroEL-like equatorial domain AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 SUPERFAMILY SSF48592 406 521 2.29E-77 T 29-03-2018 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 SUPERFAMILY SSF48592 7 134 2.29E-77 T 29-03-2018 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 Gene3D G3DSA:3.50.7.10 187 372 1.5E-94 T 29-03-2018 IPR027409 GroEL-like apical domain AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 PRINTS PR00298 60kDa chaperonin signature 27 53 7.7E-71 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 PRINTS PR00298 60kDa chaperonin signature 83 110 7.7E-71 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 PRINTS PR00298 60kDa chaperonin signature 350 375 7.7E-71 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 PRINTS PR00298 60kDa chaperonin signature 398 419 7.7E-71 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS21380 bb6da639c6a4fdce8f37ac7ce14e8287 532 PRINTS PR00298 60kDa chaperonin signature 268 291 7.7E-71 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 Gene3D G3DSA:1.10.1660.10 1 56 5.8E-20 T 29-03-2018 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 SMART SM00422 1 70 2.4E-26 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.8E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.8E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.8E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 8.2E-63 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 SUPERFAMILY SSF46955 1 126 3.26E-33 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 Gene3D G3DSA:1.10.1660.10 57 128 9.6E-16 T 29-03-2018 AL539_RS19405 7a9eea256393d974c99ba77e4459206a 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.8E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS06995 f8a36234fb080c624ad48194c2b88e00 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 6.6E-40 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL539_RS06995 f8a36234fb080c624ad48194c2b88e00 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.271 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL539_RS06995 f8a36234fb080c624ad48194c2b88e00 109 Gene3D G3DSA:3.30.1310.10 1 109 3.5E-46 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL539_RS06995 f8a36234fb080c624ad48194c2b88e00 109 PIRSF PIRSF004555 3 109 9.5E-40 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL539_RS06995 f8a36234fb080c624ad48194c2b88e00 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 3.0E-35 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL539_RS06995 f8a36234fb080c624ad48194c2b88e00 109 SUPERFAMILY SSF82607 11 103 1.96E-36 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL539_RS03135 142997545629e63a4143df72df3061b2 256 Pfam PF03741 Integral membrane protein TerC family 16 203 7.7E-43 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL539_RS09085 1cbceb69f9614baa6718300946ad004b 86 Gene3D G3DSA:1.10.150.250 2 86 1.5E-24 T 29-03-2018 AL539_RS09085 1cbceb69f9614baa6718300946ad004b 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 5.8E-25 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase AL539_RS09085 1cbceb69f9614baa6718300946ad004b 86 SUPERFAMILY SSF109910 2 79 1.83E-26 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase AL539_RS19355 f7622d0113d23d6b352b997bd6253544 689 SUPERFAMILY SSF52540 351 678 1.88E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19355 f7622d0113d23d6b352b997bd6253544 689 SUPERFAMILY SSF52540 198 321 1.88E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19355 f7622d0113d23d6b352b997bd6253544 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 7.8E-40 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL539_RS19355 f7622d0113d23d6b352b997bd6253544 689 Gene3D G3DSA:3.40.50.300 502 681 1.5E-28 T 29-03-2018 AL539_RS19355 f7622d0113d23d6b352b997bd6253544 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 2.5E-17 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL539_RS19355 f7622d0113d23d6b352b997bd6253544 689 Gene3D G3DSA:3.40.50.300 190 501 2.2E-42 T 29-03-2018 AL539_RS19355 f7622d0113d23d6b352b997bd6253544 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 1.5E-48 T 29-03-2018 IPR022161 DNA helicase IV, N-terminal domain AL539_RS13155 3a6a181176a9744d867871106a3c95a6 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL539_RS13155 3a6a181176a9744d867871106a3c95a6 224 Gene3D G3DSA:3.40.140.10 99 224 2.7E-48 T 29-03-2018 AL539_RS13155 3a6a181176a9744d867871106a3c95a6 224 SUPERFAMILY SSF47781 17 91 4.13E-12 T 29-03-2018 IPR010994 RuvA domain 2-like AL539_RS13155 3a6a181176a9744d867871106a3c95a6 224 Pfam PF04002 RadC-like JAB domain 104 222 4.7E-45 T 29-03-2018 IPR025657 RadC-like JAB domain AL539_RS13155 3a6a181176a9744d867871106a3c95a6 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 3.8E-77 T 29-03-2018 IPR001405 RadC protein AL539_RS13155 3a6a181176a9744d867871106a3c95a6 224 SUPERFAMILY SSF102712 134 192 5.89E-5 T 29-03-2018 AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 SUPERFAMILY SSF52518 367 554 2.16E-51 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 2.0E-40 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 SUPERFAMILY SSF52467 188 341 3.04E-32 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 10 547 7.5E-263 T 29-03-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 1.6E-49 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 SUPERFAMILY SSF52518 8 182 5.89E-47 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 Gene3D G3DSA:3.40.50.970 1 184 9.4E-47 T 29-03-2018 AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 8.5E-26 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 Gene3D G3DSA:3.40.50.970 347 546 1.4E-34 T 29-03-2018 AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 Gene3D G3DSA:3.40.50.1220 185 341 3.1E-25 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS19735 d9192b34d687000370f62a7ed3a56ef8 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL539_RS24060 e2adbcfefc0fd3e787b1ef76267609f1 713 Gene3D G3DSA:2.170.130.10 19 161 8.9E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS24060 e2adbcfefc0fd3e787b1ef76267609f1 713 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 713 2.2E-113 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL539_RS24060 e2adbcfefc0fd3e787b1ef76267609f1 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 5.3E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS24060 e2adbcfefc0fd3e787b1ef76267609f1 713 SUPERFAMILY SSF56935 24 713 5.27E-111 T 29-03-2018 AL539_RS24060 e2adbcfefc0fd3e787b1ef76267609f1 713 Pfam PF00593 TonB dependent receptor 294 711 3.9E-50 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS24060 e2adbcfefc0fd3e787b1ef76267609f1 713 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 713 2.0E-123 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AL539_RS24060 e2adbcfefc0fd3e787b1ef76267609f1 713 Gene3D G3DSA:2.40.170.20 162 713 9.6E-65 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS22145 c825f1ecc20e4930967bd1356bc93ece 266 Gene3D G3DSA:1.10.3720.10 20 266 7.9E-26 T 29-03-2018 AL539_RS22145 c825f1ecc20e4930967bd1356bc93ece 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 254 8.5E-32 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS22145 c825f1ecc20e4930967bd1356bc93ece 266 SUPERFAMILY SSF161098 68 253 1.23E-32 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS23390 4e64b71efdc45ece790f328b846c510c 240 Gene3D G3DSA:3.40.109.10 1 240 3.3E-61 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS23390 4e64b71efdc45ece790f328b846c510c 240 PIRSF PIRSF005426 1 240 5.3E-85 T 29-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 AL539_RS23390 4e64b71efdc45ece790f328b846c510c 240 Pfam PF00881 Nitroreductase family 8 159 1.6E-23 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL539_RS23390 4e64b71efdc45ece790f328b846c510c 240 SUPERFAMILY SSF55469 1 238 2.62E-74 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS24725 95d0f1a53a9a3132db1817a6ae4e9f22 141 Pfam PF00582 Universal stress protein family 3 138 6.9E-13 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS24725 95d0f1a53a9a3132db1817a6ae4e9f22 141 PIRSF PIRSF006276 1 141 9.4E-44 T 29-03-2018 IPR006015 Universal stress protein A AL539_RS24725 95d0f1a53a9a3132db1817a6ae4e9f22 141 SUPERFAMILY SSF52402 3 139 2.09E-24 T 29-03-2018 AL539_RS24725 95d0f1a53a9a3132db1817a6ae4e9f22 141 Gene3D G3DSA:3.40.50.620 2 141 6.1E-15 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 642 2.4E-239 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 Gene3D G3DSA:1.10.460.10 162 364 7.1E-39 T 29-03-2018 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 Pfam PF01751 Toprim domain 4 125 1.3E-16 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 SMART SM00437 284 563 1.4E-89 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 Gene3D G3DSA:2.70.20.10 371 485 2.9E-25 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 Pfam PF01131 DNA topoisomerase 159 598 9.7E-116 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 SMART SM00493 2 125 3.6E-28 T 29-03-2018 IPR006171 TOPRIM domain AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 SMART SM00436 129 224 1.2E-32 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 Gene3D G3DSA:1.10.460.10 486 655 2.5E-23 T 29-03-2018 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 SUPERFAMILY SSF56712 3 611 1.24E-184 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 64.823 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL539_RS06865 737a9fd23ba028dccdaa6e813a0371cc 655 Gene3D G3DSA:3.40.50.140 2 157 1.9E-38 T 29-03-2018 AL539_RS21550 ec0ba6acddfdddb42d175da9f61f4807 466 Gene3D G3DSA:3.50.50.60 16 444 1.0E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS21550 ec0ba6acddfdddb42d175da9f61f4807 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 1.8E-245 T 29-03-2018 IPR017715 Putative aminophosphonate oxidoreductase AL539_RS21550 ec0ba6acddfdddb42d175da9f61f4807 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 1.4E-49 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS21550 ec0ba6acddfdddb42d175da9f61f4807 466 SUPERFAMILY SSF51905 17 123 1.22E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS21550 ec0ba6acddfdddb42d175da9f61f4807 466 SUPERFAMILY SSF51905 178 308 1.22E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 72 90 2.0E-9 T 29-03-2018 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 275 294 2.0E-9 T 29-03-2018 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 228 254 2.0E-9 T 29-03-2018 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 315 2.0E-9 T 29-03-2018 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 225 2.0E-9 T 29-03-2018 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01021 OMPA domain signature 211 233 4.1E-9 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01021 OMPA domain signature 257 273 4.1E-9 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 PRINTS PR01021 OMPA domain signature 242 257 4.1E-9 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS23710 4e46306b877061327efe239deb1a6174 339 Gene3D G3DSA:3.30.1330.60 147 339 4.9E-28 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS23710 4e46306b877061327efe239deb1a6174 339 SUPERFAMILY SSF103088 183 311 8.89E-27 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS23710 4e46306b877061327efe239deb1a6174 339 Pfam PF00691 OmpA family 211 306 5.9E-18 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS13095 e3b33fc10f20b33844fa7c69dfb19ade 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 275 3.8E-6 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS13095 e3b33fc10f20b33844fa7c69dfb19ade 285 SMART SM00382 35 244 1.3E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS13095 e3b33fc10f20b33844fa7c69dfb19ade 285 Pfam PF00005 ABC transporter 26 186 7.3E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS13095 e3b33fc10f20b33844fa7c69dfb19ade 285 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS13095 e3b33fc10f20b33844fa7c69dfb19ade 285 SUPERFAMILY SSF52540 6 257 5.21E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13095 e3b33fc10f20b33844fa7c69dfb19ade 285 Gene3D G3DSA:3.40.50.300 3 281 2.5E-72 T 29-03-2018 AL539_RS03085 942d12001106fb036b521ae5fb289da1 154 SUPERFAMILY SSF55729 1 153 1.24E-38 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS03085 942d12001106fb036b521ae5fb289da1 154 Gene3D G3DSA:3.40.630.30 1 154 2.4E-30 T 29-03-2018 AL539_RS03085 942d12001106fb036b521ae5fb289da1 154 Pfam PF13673 Acetyltransferase (GNAT) domain 29 137 7.4E-20 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS04010 742fa9d449ac00e0113898f1624baf00 249 SUPERFAMILY SSF52540 8 242 3.27E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS04010 742fa9d449ac00e0113898f1624baf00 249 PIRSF PIRSF039085 5 248 3.1E-110 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL539_RS04010 742fa9d449ac00e0113898f1624baf00 249 Pfam PF00005 ABC transporter 24 172 3.9E-39 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS04010 742fa9d449ac00e0113898f1624baf00 249 SMART SM00382 33 220 2.8E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS04010 742fa9d449ac00e0113898f1624baf00 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS04010 742fa9d449ac00e0113898f1624baf00 249 Gene3D G3DSA:3.40.50.300 5 248 2.8E-77 T 29-03-2018 AL539_RS15040 cc1815bcc21c08f407bf1e59b5cf1a36 102 Pfam PF01371 Trp repressor protein 8 92 3.0E-30 T 29-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AL539_RS15040 cc1815bcc21c08f407bf1e59b5cf1a36 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 2.0E-30 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL539_RS15040 cc1815bcc21c08f407bf1e59b5cf1a36 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 22.698 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL539_RS15040 cc1815bcc21c08f407bf1e59b5cf1a36 102 Gene3D G3DSA:1.10.1270.10 1 99 4.4E-16 T 29-03-2018 AL539_RS15040 cc1815bcc21c08f407bf1e59b5cf1a36 102 PIRSF PIRSF003196 1 99 8.7E-38 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL539_RS15040 cc1815bcc21c08f407bf1e59b5cf1a36 102 SUPERFAMILY SSF48295 2 94 1.88E-27 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL539_RS15040 cc1815bcc21c08f407bf1e59b5cf1a36 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 91 3.8E-25 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 SMART SM00100 17 134 8.5E-9 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 SMART SM00116 159 216 0.023 T 29-03-2018 IPR000644 CBS domain AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 SMART SM00116 233 280 8.7E-5 T 29-03-2018 IPR000644 CBS domain AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 SUPERFAMILY SSF54631 146 279 6.1E-26 T 29-03-2018 AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 Pfam PF00571 CBS domain 156 214 4.2E-7 T 29-03-2018 IPR000644 CBS domain AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 Pfam PF00571 CBS domain 226 278 2.9E-9 T 29-03-2018 IPR000644 CBS domain AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 Gene3D G3DSA:3.10.580.10 142 286 7.8E-25 T 29-03-2018 AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 Gene3D G3DSA:2.60.120.10 1 141 6.0E-26 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 SUPERFAMILY SSF51206 7 135 5.5E-29 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 5.5E-46 T 29-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 1.6E-46 T 29-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL539_RS05675 f6043240bc8e3479d4cabea5de9eacfb 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 5.2E-14 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS00230 7d14fd36ed7693862f9f73301e5fb950 300 Gene3D G3DSA:1.10.10.10 3 84 1.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS00230 7d14fd36ed7693862f9f73301e5fb950 300 Pfam PF03466 LysR substrate binding domain 89 292 1.1E-41 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS00230 7d14fd36ed7693862f9f73301e5fb950 300 SUPERFAMILY SSF53850 89 293 7.78E-43 T 29-03-2018 AL539_RS00230 7d14fd36ed7693862f9f73301e5fb950 300 Gene3D G3DSA:3.40.190.10 89 176 1.2E-11 T 29-03-2018 AL539_RS00230 7d14fd36ed7693862f9f73301e5fb950 300 SUPERFAMILY SSF46785 3 88 2.29E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS00230 7d14fd36ed7693862f9f73301e5fb950 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.8E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS00230 7d14fd36ed7693862f9f73301e5fb950 300 Gene3D G3DSA:3.40.190.10 177 264 4.0E-27 T 29-03-2018 AL539_RS09930 d030860104f61b5115de95e044ae84af 164 Gene3D G3DSA:2.60.450.10 20 157 6.4E-27 T 29-03-2018 AL539_RS09930 d030860104f61b5115de95e044ae84af 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.456 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL539_RS09930 d030860104f61b5115de95e044ae84af 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 7.0E-47 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL539_RS09930 d030860104f61b5115de95e044ae84af 164 Pfam PF03968 OstA-like protein 30 141 4.2E-29 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL539_RS09740 409ce52ef0e9c80fd25838d6492edef6 417 Pfam PF01966 HD domain 170 290 1.2E-14 T 29-03-2018 IPR006674 HD domain AL539_RS09740 409ce52ef0e9c80fd25838d6492edef6 417 Gene3D G3DSA:1.10.3210.10 140 333 4.9E-31 T 29-03-2018 AL539_RS09740 409ce52ef0e9c80fd25838d6492edef6 417 SMART SM00471 164 300 1.3E-5 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS09740 409ce52ef0e9c80fd25838d6492edef6 417 SUPERFAMILY SSF109604 160 330 1.51E-25 T 29-03-2018 AL539_RS09740 409ce52ef0e9c80fd25838d6492edef6 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 8.9E-30 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 Gene3D G3DSA:1.10.150.20 175 246 1.1E-17 T 29-03-2018 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 SUPERFAMILY SSF100879 245 353 1.84E-24 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 6.9E-6 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 Gene3D G3DSA:3.30.70.270 45 119 5.2E-26 T 29-03-2018 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 Gene3D G3DSA:3.30.70.270 120 174 9.0E-22 T 29-03-2018 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 Pfam PF00817 impB/mucB/samB family 11 158 2.6E-48 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.593 T 29-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 SUPERFAMILY SSF56672 3 238 9.78E-92 T 29-03-2018 AL539_RS07920 b51105af49eb54aa3b0a83efd90597f7 354 Gene3D G3DSA:3.30.1490.100 247 354 7.4E-20 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.9E-20 T 29-03-2018 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 1.6E-23 T 29-03-2018 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 SUPERFAMILY SSF54534 278 380 1.83E-29 T 29-03-2018 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 SUPERFAMILY SSF109998 24 196 5.49E-37 T 29-03-2018 IPR027304 Trigger factor/SurA domain AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 Gene3D G3DSA:3.10.50.40 166 275 4.7E-23 T 29-03-2018 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.922 T 29-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 Gene3D G3DSA:1.10.4030.10 21 147 1.2E-20 T 29-03-2018 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 Pfam PF09312 SurA N-terminal domain 24 141 5.7E-43 T 29-03-2018 IPR015391 SurA N-terminal AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 SUPERFAMILY SSF54534 172 270 6.21E-24 T 29-03-2018 AL539_RS13975 a79e435a049c8fc64e6f828a41507476 427 Gene3D G3DSA:3.10.50.40 276 381 2.5E-29 T 29-03-2018 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 76 84 4.9E-11 T 29-03-2018 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 94 103 4.9E-11 T 29-03-2018 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 46 57 4.9E-11 T 29-03-2018 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 58 66 4.9E-11 T 29-03-2018 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 33 47 1.1 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 67 83 0.22 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 85 101 4.3 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 103 117 2.0 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 48 65 0.0027 T 29-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 Gene3D G3DSA:2.150.10.10 67 193 4.9E-16 T 29-03-2018 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 Gene3D G3DSA:2.150.10.10 2 66 1.5E-9 T 29-03-2018 AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 SUPERFAMILY SSF51120 4 176 7.12E-22 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_RS24160 d4ec802bb66f98a911175fee65127f6c 196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 63 81 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL539_RS10505 03b615b12d23b6fdb82e4cc5bdcde669 70 SUPERFAMILY SSF118001 1 70 2.48E-28 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL539_RS10505 03b615b12d23b6fdb82e4cc5bdcde669 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.99 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL539_RS10505 03b615b12d23b6fdb82e4cc5bdcde669 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.6E-34 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL539_RS10505 03b615b12d23b6fdb82e4cc5bdcde669 70 PIRSF PIRSF006169 1 70 3.9E-35 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL539_RS10505 03b615b12d23b6fdb82e4cc5bdcde669 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 4.0E-23 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL539_RS10505 03b615b12d23b6fdb82e4cc5bdcde669 70 Gene3D G3DSA:1.10.10.610 1 70 4.6E-34 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AL539_RS05990 a9fafa5f5f44999e5f5a272cfa9c66f1 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.6E-100 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS05990 a9fafa5f5f44999e5f5a272cfa9c66f1 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.094 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS05990 a9fafa5f5f44999e5f5a272cfa9c66f1 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.7E-101 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS05990 a9fafa5f5f44999e5f5a272cfa9c66f1 268 SUPERFAMILY SSF51366 1 266 6.59E-92 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL539_RS05990 a9fafa5f5f44999e5f5a272cfa9c66f1 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 29-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL539_RS05990 a9fafa5f5f44999e5f5a272cfa9c66f1 268 Gene3D G3DSA:3.20.20.70 2 268 2.8E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 174 249 2.3E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 Gene3D G3DSA:3.40.50.2300 6 147 7.0E-33 T 29-03-2018 AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 SUPERFAMILY SSF46894 152 250 1.5E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 Pfam PF00072 Response regulator receiver domain 22 131 1.0E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 SMART SM00448 20 131 6.5E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 SUPERFAMILY SSF52172 21 150 3.7E-38 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 Gene3D G3DSA:1.10.10.10 148 253 3.2E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23815 0b02abf98c977d515022d9074faf0b98 253 SMART SM00862 173 249 5.2E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS07435 d40e3f2995cbf3d2551b98742c58f407 136 PIRSF PIRSF039090 1 133 5.6E-42 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS07435 d40e3f2995cbf3d2551b98742c58f407 136 Gene3D G3DSA:1.20.120.340 2 125 7.0E-41 T 29-03-2018 AL539_RS07435 d40e3f2995cbf3d2551b98742c58f407 136 SUPERFAMILY SSF101116 6 127 1.96E-38 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS07435 d40e3f2995cbf3d2551b98742c58f407 136 Pfam PF02561 Flagellar protein FliS 6 122 2.1E-36 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS07435 d40e3f2995cbf3d2551b98742c58f407 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.3E-22 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS21145 dd296eb02b19e6b1d477dfc2e40a6e37 195 SUPERFAMILY SSF53335 4 194 9.48E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS21145 dd296eb02b19e6b1d477dfc2e40a6e37 195 Gene3D G3DSA:3.40.50.150 1 195 3.4E-21 T 29-03-2018 AL539_RS21145 dd296eb02b19e6b1d477dfc2e40a6e37 195 Pfam PF13649 Methyltransferase domain 36 126 4.1E-11 T 29-03-2018 AL539_RS20710 2ebe59dc3490976789362fd46daa1fd2 118 Gene3D G3DSA:1.10.3830.10 7 118 1.4E-41 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL539_RS20710 2ebe59dc3490976789362fd46daa1fd2 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL539_RS20710 2ebe59dc3490976789362fd46daa1fd2 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 115 3.8E-36 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 29-03-2018 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 Gene3D G3DSA:1.10.486.10 443 655 5.5E-71 T 29-03-2018 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1154 20.95 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1122 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 SUPERFAMILY SSF52980 838 1145 1.13E-75 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 Gene3D G3DSA:1.10.10.160 86 185 1.8E-34 T 29-03-2018 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 PIRSF PIRSF000980 1 1161 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 SUPERFAMILY SSF52540 2 351 1.33E-125 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08105 29ba8f94c54cb187de849a79205dd1af 1163 SUPERFAMILY SSF52540 365 815 1.81E-103 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 SUPERFAMILY SSF58104 329 638 3.53E-78 T 29-03-2018 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 Gene3D G3DSA:3.30.450.20 173 276 5.3E-10 T 29-03-2018 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 604 3.0E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 SMART SM00304 307 361 2.3E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 304 1.5E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 1.5E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 1.5E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 SMART SM00283 376 637 4.6E-85 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 Gene3D G3DSA:1.10.287.950 409 638 5.0E-54 T 29-03-2018 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 Gene3D G3DSA:1.10.287.950 304 408 2.4E-6 T 29-03-2018 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 Pfam PF00672 HAMP domain 308 357 2.0E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24140 af3e96bfde7212a44c1a4ae0ca16f51c 638 Gene3D G3DSA:3.30.450.20 51 172 1.6E-4 T 29-03-2018 AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 8 595 2.3E-85 T 29-03-2018 IPR005887 Alpha-1,2-mannosidase, putative AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 Gene3D G3DSA:2.70.98.10 36 369 2.5E-73 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 Gene3D G3DSA:3.30.2080.10 740 901 6.6E-59 T 29-03-2018 AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 Pfam PF07971 Glycosyl hydrolase family 92 286 891 9.2E-141 T 29-03-2018 IPR012939 Glycosyl hydrolase family 92 AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 SUPERFAMILY SSF48208 771 887 8.05E-28 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 SUPERFAMILY SSF48208 504 699 8.05E-28 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 SUPERFAMILY SSF48208 313 476 8.05E-28 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20140 87a7b617c6872a89a43ec804a022bd77 901 Gene3D G3DSA:1.20.1050.60 393 487 1.1E-19 T 29-03-2018 AL539_RS23830 f7869c678ef3c977b5cd254b32cbaa37 469 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 1.8E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS23830 f7869c678ef3c977b5cd254b32cbaa37 469 SUPERFAMILY SSF53383 60 463 7.75E-66 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS23830 f7869c678ef3c977b5cd254b32cbaa37 469 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 269 288 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL539_RS23830 f7869c678ef3c977b5cd254b32cbaa37 469 Pfam PF00266 Aminotransferase class-V 115 410 8.5E-32 T 29-03-2018 IPR000192 Aminotransferase class V domain AL539_RS23830 f7869c678ef3c977b5cd254b32cbaa37 469 Gene3D G3DSA:3.40.640.10 100 350 2.1E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS23830 f7869c678ef3c977b5cd254b32cbaa37 469 Gene3D G3DSA:3.90.1150.10 351 467 1.6E-8 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS05185 9097fba2b0c567f2c3fa3b18ecc15dfd 336 Pfam PF06189 5'-nucleotidase 46 310 2.4E-99 T 29-03-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 AL539_RS05185 9097fba2b0c567f2c3fa3b18ecc15dfd 336 Gene3D G3DSA:3.40.50.1000 167 314 8.1E-17 T 29-03-2018 IPR023214 HAD-like domain AL539_RS14245 69db72a7a5f7b2e56008c379804e6618 54 SUPERFAMILY SSF46955 1 53 3.3E-12 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS14245 69db72a7a5f7b2e56008c379804e6618 54 Gene3D G3DSA:1.10.10.10 3 54 3.6E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14245 69db72a7a5f7b2e56008c379804e6618 54 Pfam PF12728 Helix-turn-helix domain 6 53 9.2E-10 T 29-03-2018 AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 8.0E-42 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 1.4E-108 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 SMART SM00518 12 288 1.8E-124 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 Gene3D G3DSA:3.20.20.150 10 293 5.2E-57 T 29-03-2018 AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 SUPERFAMILY SSF51658 12 286 1.1E-100 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.553 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL539_RS14780 f4fb1439f84610b0f8466473c89173d6 294 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 1 75 2.8E-32 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 29-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10245 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02670 9aa5d6e186a5ce477b39b2d25cbb8548 109 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 17 70 2.9E-5 T 29-03-2018 IPR032871 AHH domain-containing protein AL539_RS09095 ec6a9b59237284aba31c6dbcdc6faa29 170 Pfam PF04073 Aminoacyl-tRNA editing domain 40 159 2.5E-30 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS09095 ec6a9b59237284aba31c6dbcdc6faa29 170 Gene3D G3DSA:3.90.960.10 16 168 1.4E-37 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS09095 ec6a9b59237284aba31c6dbcdc6faa29 170 SUPERFAMILY SSF55826 19 169 5.76E-39 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 PIRSF PIRSF000727 1 817 0.0 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.3E-133 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Gene3D G3DSA:3.40.50.720 465 635 8.2E-30 T 29-03-2018 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Gene3D G3DSA:3.30.70.260 291 382 1.6E-24 T 29-03-2018 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.0E-26 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Gene3D G3DSA:3.40.1160.10 1 290 3.1E-62 T 29-03-2018 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 SUPERFAMILY SSF51735 463 636 7.09E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Pfam PF13840 ACT domain 393 456 1.6E-7 T 29-03-2018 IPR027795 GATS-like ACT domain AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Pfam PF00742 Homoserine dehydrogenase 614 810 5.1E-47 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 SUPERFAMILY SSF55021 303 381 1.15E-22 T 29-03-2018 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 SUPERFAMILY SSF55021 383 476 3.72E-22 T 29-03-2018 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Pfam PF01842 ACT domain 324 379 6.6E-10 T 29-03-2018 IPR002912 ACT domain AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 SUPERFAMILY SSF53633 1 298 4.58E-78 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 SUPERFAMILY SSF55347 614 797 2.09E-51 T 29-03-2018 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Pfam PF00696 Amino acid kinase family 2 284 1.6E-52 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Gene3D G3DSA:3.30.360.10 636 793 8.1E-53 T 29-03-2018 AL539_RS14755 84130a86eecf9cd4e7dde6639665b4e6 819 Gene3D G3DSA:3.30.70.260 383 464 8.3E-20 T 29-03-2018 AL539_RS03230 1c2a08f350df818a287b578b2fcd0e7c 242 Gene3D G3DSA:1.10.340.30 50 166 2.5E-24 T 29-03-2018 AL539_RS03230 1c2a08f350df818a287b578b2fcd0e7c 242 Pfam PF03352 Methyladenine glycosylase 56 151 1.1E-15 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL539_RS03230 1c2a08f350df818a287b578b2fcd0e7c 242 SUPERFAMILY SSF48150 53 198 1.43E-40 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 Pfam PF13411 MerR HTH family regulatory protein 1 66 8.9E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.9E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.9E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.9E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 Gene3D G3DSA:1.10.1660.10 56 117 5.8E-15 T 29-03-2018 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 Gene3D G3DSA:1.10.1660.10 1 55 6.4E-21 T 29-03-2018 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 SMART SM00422 1 70 6.5E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS24695 73f3aaf4f6cdd3c7b1b9c210c8b23ce3 118 SUPERFAMILY SSF46955 1 114 6.59E-32 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 Gene3D G3DSA:1.10.10.10 1 91 6.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.1E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.1E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.1E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.1E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 SUPERFAMILY SSF46785 8 96 3.64E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 6.7E-17 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS14925 9accc6bcc03f40fcd000a0da18684817 102 SMART SM00418 15 93 7.5E-29 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Gene3D G3DSA:3.40.50.300 1155 1437 0.0023 T 29-03-2018 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Pfam PF16330 MukB hinge domain 647 811 1.4E-72 T 29-03-2018 IPR032520 MukB, hinge domain AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 PIRSF PIRSF005246 1 1487 0.0 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Gene3D G3DSA:3.40.1140.10 1 227 1.1E-14 T 29-03-2018 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.922 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Gene3D G3DSA:1.20.140.50 604 967 1.5E-4 T 29-03-2018 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 SUPERFAMILY SSF52540 1284 1434 6.51E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 SUPERFAMILY SSF52540 21 55 6.51E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Pfam PF04310 MukB N-terminal 2 227 4.3E-121 T 29-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Gene3D G3DSA:1.10.287.510 984 1115 0.002 T 29-03-2018 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.0E-14 T 29-03-2018 AL539_RS17715 e5021c76ed2db502d6db8c17c1cbef2c 1487 SUPERFAMILY SSF52540 26 224 1.23E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.4E-48 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 Gene3D G3DSA:3.40.50.970 1 185 3.5E-62 T 29-03-2018 AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 SUPERFAMILY SSF52518 358 545 1.97E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 SUPERFAMILY SSF52518 1 176 2.36E-61 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 SUPERFAMILY SSF52467 182 341 9.27E-56 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 3.8E-55 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 Gene3D G3DSA:3.40.50.1220 186 338 4.3E-46 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 Gene3D G3DSA:3.40.50.970 343 533 5.6E-45 T 29-03-2018 AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.7E-40 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL539_RS12090 0bf7e4e875dfe147b7ab745264fdd09a 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 5.6E-210 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL539_RS11430 36015f05572eb46012147707587bda75 106 Pfam PF00581 Rhodanese-like domain 13 98 1.8E-11 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS11430 36015f05572eb46012147707587bda75 106 Gene3D G3DSA:3.40.250.10 2 106 2.1E-24 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS11430 36015f05572eb46012147707587bda75 106 SMART SM00450 7 102 1.8E-18 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS11430 36015f05572eb46012147707587bda75 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.882 T 29-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AL539_RS11430 36015f05572eb46012147707587bda75 106 SUPERFAMILY SSF52821 1 105 1.57E-29 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 Gene3D G3DSA:1.10.287.110 1 78 9.9E-11 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 SUPERFAMILY SSF46565 1 72 4.58E-17 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 4.8E-41 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.193 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 3.0E-19 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 Pfam PF00226 DnaJ domain 2 70 1.9E-7 T 29-03-2018 IPR001623 DnaJ domain AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 Gene3D G3DSA:1.20.1280.20 80 169 2.4E-27 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 SUPERFAMILY SSF47144 78 170 5.62E-25 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL539_RS15315 beafd84315efe41ac5136ed612745f83 171 SMART SM00271 1 66 8.8E-10 T 29-03-2018 IPR001623 DnaJ domain AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 SUPERFAMILY SSF81923 11 128 9.03E-15 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Gene3D G3DSA:1.10.1780.10 1 159 1.2E-17 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 684 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 713 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 610 2.8E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 843 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 SMART SM01086 760 852 1.8E-4 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Gene3D G3DSA:1.10.8.60 354 538 9.8E-37 T 29-03-2018 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Gene3D G3DSA:3.40.50.300 167 352 7.4E-22 T 29-03-2018 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 6.1E-9 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 760 834 6.0E-10 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Gene3D G3DSA:3.40.50.300 540 774 2.9E-37 T 29-03-2018 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Gene3D G3DSA:1.10.8.60 775 854 8.7E-10 T 29-03-2018 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 SMART SM00382 588 746 6.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 SMART SM00382 208 353 1.0E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 Pfam PF07724 AAA domain (Cdc48 subfamily) 587 753 1.1E-37 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 SUPERFAMILY SSF52540 169 498 4.89E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17935 a233f832938e8b6a190f074d33d3f14a 855 SUPERFAMILY SSF52540 537 839 4.56E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11505 4195536bd1ea65257feb1cc38f7fe7c9 405 SUPERFAMILY SSF103473 9 399 7.46E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS11505 4195536bd1ea65257feb1cc38f7fe7c9 405 Pfam PF07690 Major Facilitator Superfamily 18 339 1.4E-19 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS11505 4195536bd1ea65257feb1cc38f7fe7c9 405 Gene3D G3DSA:1.20.1250.20 5 208 1.1E-17 T 29-03-2018 AL539_RS11505 4195536bd1ea65257feb1cc38f7fe7c9 405 Gene3D G3DSA:1.20.1250.20 210 403 1.7E-13 T 29-03-2018 AL539_RS03005 d1ae49760e76f1799ab707f2ca5f41b7 365 Gene3D G3DSA:1.25.40.70 38 140 0.0011 T 29-03-2018 AL539_RS03005 d1ae49760e76f1799ab707f2ca5f41b7 365 SUPERFAMILY SSF48452 178 339 1.59E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS03005 d1ae49760e76f1799ab707f2ca5f41b7 365 Gene3D G3DSA:1.25.40.10 223 303 3.7E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS03005 d1ae49760e76f1799ab707f2ca5f41b7 365 SUPERFAMILY SSF48371 71 174 1.47E-5 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 AL539_RS03005 d1ae49760e76f1799ab707f2ca5f41b7 365 Gene3D G3DSA:1.25.40.10 141 222 6.0E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 505 521 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 Pfam PF00005 ABC transporter 344 481 2.2E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 SMART SM00382 352 529 3.1E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 Pfam PF00664 ABC transporter transmembrane region 49 260 2.4E-12 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 SUPERFAMILY SSF52540 326 528 2.82E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 SUPERFAMILY SSF90123 14 315 1.57E-35 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 Gene3D G3DSA:1.20.1560.10 12 316 4.4E-27 T 29-03-2018 AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 Gene3D G3DSA:3.40.50.300 317 536 6.6E-50 T 29-03-2018 AL539_RS24425 087d69da09b7d6fe01893ee52da098f0 536 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 Gene3D G3DSA:3.40.50.720 374 479 1.3E-20 T 29-03-2018 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 Gene3D G3DSA:3.50.50.60 480 620 3.1E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 SUPERFAMILY SSF51971 551 622 1.35E-41 T 29-03-2018 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 SUPERFAMILY SSF51971 373 518 1.35E-41 T 29-03-2018 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 Gene3D G3DSA:3.20.20.70 1 368 5.3E-108 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 627 4.2E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 1.4E-9 T 29-03-2018 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 1.4E-9 T 29-03-2018 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 SUPERFAMILY SSF51395 2 361 2.13E-108 T 29-03-2018 AL539_RS06880 04dd6238353e8508213063f4d9ee0e83 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 6.6E-83 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL539_RS12935 cba4254ab2647a8835e38e50e5e5a3d1 164 SUPERFAMILY SSF103054 86 163 9.02E-25 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AL539_RS12935 cba4254ab2647a8835e38e50e5e5a3d1 164 Gene3D G3DSA:3.30.1360.100 88 162 7.1E-26 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AL539_RS12935 cba4254ab2647a8835e38e50e5e5a3d1 164 Pfam PF04612 Type II secretion system (T2SS), protein M 7 163 1.9E-53 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL539_RS12935 cba4254ab2647a8835e38e50e5e5a3d1 164 PIRSF PIRSF006291 3 163 1.4E-39 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL539_RS20655 06741cd5d212d071f567fbd8dacd2eb6 205 Gene3D G3DSA:3.40.50.1820 2 202 3.3E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS20655 06741cd5d212d071f567fbd8dacd2eb6 205 SUPERFAMILY SSF53474 3 188 2.27E-15 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:2.120.10.90 497 745 2.3E-40 T 29-03-2018 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 29-03-2018 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:3.90.199.10 36 218 2.0E-75 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.19 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.903 T 29-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 SMART SM00434 13 463 1.1E-233 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 SUPERFAMILY SSF101904 499 743 5.1E-51 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:1.10.268.10 346 485 7.2E-45 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 SUPERFAMILY SSF56719 33 485 3.01E-156 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:3.30.1360.40 240 333 1.5E-23 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL539_RS14435 5e6b3a1c68a0c221550016147dfb288b 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.8E-136 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL539_RS01955 eda4274a75088d764f7a5717cc781bed 141 Gene3D G3DSA:3.10.450.40 74 128 5.7E-9 T 29-03-2018 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 1.1E-26 T 29-03-2018 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL539_RS11025 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 Gene3D G3DSA:3.40.190.10 10 165 1.6E-16 T 29-03-2018 AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 Gene3D G3DSA:1.10.530.10 297 470 8.8E-35 T 29-03-2018 AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 SUPERFAMILY SSF53955 265 417 1.22E-35 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 SUPERFAMILY SSF53955 452 470 1.22E-35 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 12 488 48.695 T 29-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 Pfam PF01464 Transglycosylase SLT domain 318 421 2.6E-20 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 287 8.7E-29 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 Gene3D G3DSA:3.40.190.10 168 296 0.0074 T 29-03-2018 AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 SUPERFAMILY SSF53850 48 287 1.09E-32 T 29-03-2018 AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 SMART SM00062 47 288 2.0E-26 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS15810 ed9d34b569ee6001ce46f475365f0917 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 329 357 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL539_RS02470 4aa94b1627d71211e64248e66765ab62 254 Gene3D G3DSA:1.10.260.40 8 75 0.0016 T 29-03-2018 AL539_RS02470 4aa94b1627d71211e64248e66765ab62 254 Gene3D G3DSA:1.10.10.10 76 187 0.0049 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 SUPERFAMILY SSF63380 1 93 1.7E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 SUPERFAMILY SSF63380 93 198 5.61E-29 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 PIRSF PIRSF000498 1 203 1.1E-66 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 Gene3D G3DSA:2.40.30.20 94 191 4.8E-26 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 8.0E-75 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 Pfam PF00677 Lumazine binding domain 3 87 3.6E-20 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 Pfam PF00677 Lumazine binding domain 100 184 1.0E-19 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS03415 f25236f0943a8306897bd66a6a1e7dde 203 Gene3D G3DSA:2.40.30.20 1 93 2.9E-26 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 294 1.2E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 SUPERFAMILY SSF56014 636 810 9.42E-50 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 635 760 1.1E-18 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 682 698 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 16 803 0.0 T 29-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.8E-17 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 4.8E-17 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.8E-17 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.8E-17 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.8E-17 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 SUPERFAMILY SSF55124 505 644 5.23E-27 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 SUPERFAMILY SSF51905 14 199 6.48E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 SUPERFAMILY SSF51905 159 319 8.36E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 624 1.6E-11 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Gene3D G3DSA:3.40.50.720 140 317 9.7E-27 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 474 3.0E-14 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Gene3D G3DSA:3.90.480.10 472 631 1.5E-18 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Gene3D G3DSA:3.30.413.10 634 814 3.4E-38 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00397 Sirohaem Fe-binding site signature 639 657 8.7E-7 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00397 Sirohaem Fe-binding site signature 682 700 8.7E-7 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 3.8E-9 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 3.8E-9 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 3.8E-9 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 182 3.8E-9 T 29-03-2018 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 PIRSF PIRSF037149 9 838 0.0 T 29-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AL539_RS26060 51b1d3576e5dda03b16c7eb9d0da9d4e 839 Gene3D G3DSA:3.50.50.60 7 139 7.8E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS07960 cd02dee3ed6b8db49187cea4591a396f 256 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 249 1.8E-94 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AL539_RS07960 cd02dee3ed6b8db49187cea4591a396f 256 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 253 35.569 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AL539_RS07960 cd02dee3ed6b8db49187cea4591a396f 256 PIRSF PIRSF009437 1 256 9.4E-103 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AL539_RS07960 cd02dee3ed6b8db49187cea4591a396f 256 Pfam PF04205 FMN-binding domain 143 238 3.7E-15 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL539_RS07960 cd02dee3ed6b8db49187cea4591a396f 256 SMART SM00900 143 241 2.0E-32 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL539_RS16630 73a333a369bc616296758c653d985d20 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 56 0.003 T 29-03-2018 AL539_RS08445 2968d35739cedfb70540c18ab1cbbc2e 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS08445 2968d35739cedfb70540c18ab1cbbc2e 276 SUPERFAMILY SSF51717 2 274 1.83E-105 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS08445 2968d35739cedfb70540c18ab1cbbc2e 276 Pfam PF00809 Pterin binding enzyme 18 257 2.8E-88 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS08445 2968d35739cedfb70540c18ab1cbbc2e 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL539_RS08445 2968d35739cedfb70540c18ab1cbbc2e 276 Gene3D G3DSA:3.20.20.20 2 275 5.4E-109 T 29-03-2018 AL539_RS08445 2968d35739cedfb70540c18ab1cbbc2e 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 3.0E-102 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 PIRSF PIRSF036431 320 686 1.0E-103 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 PIRSF PIRSF036431 1 332 4.1E-42 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 SUPERFAMILY SSF47384 457 532 1.14E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 Gene3D G3DSA:3.30.450.20 163 274 9.4E-4 T 29-03-2018 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 3.6E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 3.6E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 3.6E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 Gene3D G3DSA:1.10.287.130 453 532 1.6E-4 T 29-03-2018 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 Pfam PF13426 PAS domain 324 427 6.9E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 SUPERFAMILY SSF55785 301 427 8.57E-13 T 29-03-2018 IPR000014 PAS domain AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 Gene3D G3DSA:3.30.450.20 59 162 9.4E-7 T 29-03-2018 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 SMART SM00086 389 429 4.9E-5 T 29-03-2018 IPR001610 PAC motif AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 8.0E-15 T 29-03-2018 IPR000014 PAS domain AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 Gene3D G3DSA:3.30.565.10 539 686 1.2E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 SMART SM00387 577 686 5.5E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 684 2.8E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 Gene3D G3DSA:3.30.450.20 290 452 1.3E-18 T 29-03-2018 AL539_RS21875 3550729043598be3b5df8f30c3b60835 686 SUPERFAMILY SSF55874 530 684 1.96E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS17320 51528441341494f3e24fb725dfe752da 100 Gene3D G3DSA:1.10.10.10 1 100 3.8E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17320 51528441341494f3e24fb725dfe752da 100 SUPERFAMILY SSF46767 2 84 7.59E-25 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL539_RS17320 51528441341494f3e24fb725dfe752da 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.8E-24 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL539_RS16935 8a031b9b85f8344700f4ad0ee4eba3bb 314 Gene3D G3DSA:3.40.190.10 178 266 2.1E-26 T 29-03-2018 AL539_RS16935 8a031b9b85f8344700f4ad0ee4eba3bb 314 Pfam PF03466 LysR substrate binding domain 90 295 6.4E-44 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS16935 8a031b9b85f8344700f4ad0ee4eba3bb 314 SUPERFAMILY SSF46785 8 114 7.06E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16935 8a031b9b85f8344700f4ad0ee4eba3bb 314 Gene3D G3DSA:3.40.190.10 88 177 4.0E-16 T 29-03-2018 AL539_RS16935 8a031b9b85f8344700f4ad0ee4eba3bb 314 Gene3D G3DSA:1.10.10.10 5 86 6.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16935 8a031b9b85f8344700f4ad0ee4eba3bb 314 SUPERFAMILY SSF53850 90 299 8.69E-47 T 29-03-2018 AL539_RS16935 8a031b9b85f8344700f4ad0ee4eba3bb 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 SMART SM00862 145 216 4.2E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 Gene3D G3DSA:1.10.10.10 120 219 2.6E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 Pfam PF00072 Response regulator receiver domain 3 113 4.4E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 SMART SM00448 1 112 9.6E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 SUPERFAMILY SSF52172 1 133 1.71E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 Gene3D G3DSA:3.40.50.2300 1 119 5.4E-30 T 29-03-2018 AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS01950 f0e80e828aa6b169fc1e7499376c0d5c 219 SUPERFAMILY SSF46894 119 217 7.65E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS25865 ebad44b369076c2e8275228e22720a6e 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 2.3E-9 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS25865 ebad44b369076c2e8275228e22720a6e 215 Gene3D G3DSA:3.40.30.10 1 92 6.9E-17 T 29-03-2018 AL539_RS25865 ebad44b369076c2e8275228e22720a6e 215 SUPERFAMILY SSF47616 83 198 9.14E-14 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS25865 ebad44b369076c2e8275228e22720a6e 215 SUPERFAMILY SSF52833 5 84 2.5E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS25865 ebad44b369076c2e8275228e22720a6e 215 Gene3D G3DSA:1.20.1050.10 93 201 2.0E-16 T 29-03-2018 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 127 204 2.5E-20 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 8.8E-18 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 8.8E-18 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 8.8E-18 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 8.8E-18 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 Gene3D G3DSA:3.30.1150.10 47 206 5.0E-22 T 29-03-2018 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 3.1E-18 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL539_RS22010 5886960fe2e43d71fad7c65fdb2dc887 206 SUPERFAMILY SSF74653 118 196 2.62E-24 T 29-03-2018 AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 SUPERFAMILY SSF46785 3 111 1.16E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 SUPERFAMILY SSF53850 90 285 2.44E-37 T 29-03-2018 AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 Gene3D G3DSA:3.40.190.10 181 268 5.2E-15 T 29-03-2018 AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 Gene3D G3DSA:1.10.10.10 1 87 3.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 Pfam PF03466 LysR substrate binding domain 90 284 1.4E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS18680 bc1303d00c0ff41198284e7f3210fac8 301 Gene3D G3DSA:3.40.190.10 89 180 6.7E-21 T 29-03-2018 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 Gene3D G3DSA:1.10.10.10 1 60 5.6E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 Pfam PF00455 DeoR C terminal sensor domain 71 226 4.4E-41 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 SMART SM00420 4 56 5.7E-20 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 SUPERFAMILY SSF100950 70 227 8.69E-24 T 29-03-2018 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 Gene3D G3DSA:3.40.50.1360 61 233 1.2E-33 T 29-03-2018 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 SMART SM01134 67 227 8.8E-47 T 29-03-2018 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 SUPERFAMILY SSF46785 2 59 3.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS21315 8b5b400e8ac85796d5c05b142a650b21 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 92 9.8E-41 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 29-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 29-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13545 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 1.1E-31 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13775 c086b1f4e173ecbc601c759b2cc01a76 115 Gene3D G3DSA:3.10.490.10 1 114 1.1E-30 T 29-03-2018 AL539_RS13775 c086b1f4e173ecbc601c759b2cc01a76 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.5E-25 T 29-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL539_RS13775 c086b1f4e173ecbc601c759b2cc01a76 115 SUPERFAMILY SSF110857 3 113 9.16E-32 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AL539_RS11720 d8ccb5efe33a33e7c934aeb7bba8ec49 305 SUPERFAMILY SSF103481 207 292 1.44E-8 T 29-03-2018 AL539_RS11720 d8ccb5efe33a33e7c934aeb7bba8ec49 305 SUPERFAMILY SSF103481 51 147 1.44E-13 T 29-03-2018 AL539_RS11720 d8ccb5efe33a33e7c934aeb7bba8ec49 305 TIGRFAM TIGR00688 rarD: protein RarD 12 265 2.9E-87 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AL539_RS11720 d8ccb5efe33a33e7c934aeb7bba8ec49 305 Pfam PF00892 EamA-like transporter family 13 146 1.4E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS25580 9765db098eb3c6361cc90f5b4743b5e7 304 SUPERFAMILY SSF53474 192 304 3.9E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25580 9765db098eb3c6361cc90f5b4743b5e7 304 SUPERFAMILY SSF53474 3 141 3.9E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25580 9765db098eb3c6361cc90f5b4743b5e7 304 Gene3D G3DSA:3.40.50.1820 2 304 1.1E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25580 9765db098eb3c6361cc90f5b4743b5e7 304 Pfam PF01738 Dienelactone hydrolase family 30 133 4.2E-6 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL539_RS24495 38e0f5f51e213cef28fe04393b93001e 202 Gene3D G3DSA:2.60.120.280 4 147 7.8E-5 T 29-03-2018 AL539_RS12805 1077198474e61595324249d1dbe4467e 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 9.5E-90 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AL539_RS12805 1077198474e61595324249d1dbe4467e 334 SUPERFAMILY SSF51556 4 330 4.4E-73 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS12805 1077198474e61595324249d1dbe4467e 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 2.7E-120 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AL539_RS12805 1077198474e61595324249d1dbe4467e 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.34 T 29-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AL539_RS12805 1077198474e61595324249d1dbe4467e 334 Gene3D G3DSA:3.20.20.140 1 334 1.5E-71 T 29-03-2018 AL539_RS03675 38124671bcb91fc97e28d0402a8355fb 299 Pfam PF15575 Immunity protein 49 91 283 1.1E-41 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS24620 645385ae33f7b3e83e2a222312317554 418 Gene3D G3DSA:3.40.50.10840 2 236 5.5E-76 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL539_RS24620 645385ae33f7b3e83e2a222312317554 418 SUPERFAMILY SSF142764 3 417 1.31E-130 T 29-03-2018 AL539_RS24620 645385ae33f7b3e83e2a222312317554 418 Pfam PF07005 Putative sugar-binding N-terminal domain 3 227 2.6E-68 T 29-03-2018 IPR010737 Putative sugar-binding, N-terminal domain AL539_RS24620 645385ae33f7b3e83e2a222312317554 418 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 254 410 4.7E-40 T 29-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain AL539_RS07220 b01867d4d8d2b872789eb883dc7fd03c 407 Hamap MF_00677 UPF0261 protein . 5 407 48.303 T 29-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL539_RS07220 b01867d4d8d2b872789eb883dc7fd03c 407 PIRSF PIRSF033271 4 407 1.3E-183 T 29-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL539_RS07220 b01867d4d8d2b872789eb883dc7fd03c 407 Pfam PF06792 Uncharacterised protein family (UPF0261) 7 405 1.9E-158 T 29-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL539_RS00725 b01867d4d8d2b872789eb883dc7fd03c 407 Hamap MF_00677 UPF0261 protein . 5 407 48.303 T 29-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL539_RS00725 b01867d4d8d2b872789eb883dc7fd03c 407 PIRSF PIRSF033271 4 407 1.3E-183 T 29-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL539_RS00725 b01867d4d8d2b872789eb883dc7fd03c 407 Pfam PF06792 Uncharacterised protein family (UPF0261) 7 405 1.9E-158 T 29-03-2018 IPR008322 Uncharacterised protein family UPF0261 AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 ProSitePatterns PS00018 EF-hand calcium-binding domain. 205 217 - T 29-03-2018 IPR018247 EF-Hand 1, calcium-binding site AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 Gene3D G3DSA:2.60.500.10 837 925 1.0E-10 T 29-03-2018 AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 Gene3D G3DSA:2.60.500.10 645 738 1.4E-8 T 29-03-2018 AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 SUPERFAMILY SSF49299 733 829 5.89E-6 T 29-03-2018 IPR000601 PKD domain AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 105 393 6.5E-73 T 29-03-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 Gene3D G3DSA:3.40.1850.10 742 836 5.6E-17 T 29-03-2018 AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 SUPERFAMILY SSF55486 251 316 4.51E-7 T 29-03-2018 AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 Pfam PF05547 Immune inhibitor A peptidase M6 126 334 3.2E-15 T 29-03-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 931 951 0.0012 T 29-03-2018 IPR020008 GlyGly-CTERM domain AL539_RS17075 4d1fc8533fa5e8d752a6881ad0042221 952 PIRSF PIRSF036597 1 952 0.0 T 29-03-2018 IPR012045 Peptidase M6, unassigned InhA-related AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.5E-37 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.3E-84 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 Gene3D G3DSA:3.30.1490.20 124 210 3.1E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 Gene3D G3DSA:3.40.50.20 1 123 3.8E-50 T 29-03-2018 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 SUPERFAMILY SSF52440 1 113 5.47E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 SUPERFAMILY SSF51246 331 444 1.52E-43 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 SUPERFAMILY SSF56059 83 346 1.4E-70 T 29-03-2018 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 Gene3D G3DSA:3.30.470.20 211 444 9.9E-99 T 29-03-2018 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 SMART SM00878 336 441 1.2E-64 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS11005 732e79d2e267ddde7447c2dfe4af455b 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.1E-244 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AL539_RS14475 41230fe5d542f0639da0c18970f2cb68 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 29-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AL539_RS14475 41230fe5d542f0639da0c18970f2cb68 130 SUPERFAMILY SSF54211 5 130 2.77E-48 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS14475 41230fe5d542f0639da0c18970f2cb68 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.853 T 29-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AL539_RS14475 41230fe5d542f0639da0c18970f2cb68 130 Gene3D G3DSA:3.30.230.10 3 130 5.0E-52 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS14475 41230fe5d542f0639da0c18970f2cb68 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.8E-46 T 29-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AL539_RS11380 696e9c5aaa736ea77dc3bc26f3a2c40e 451 Pfam PF01554 MatE 252 401 1.3E-14 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS11380 696e9c5aaa736ea77dc3bc26f3a2c40e 451 Pfam PF01554 MatE 26 186 4.1E-25 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS11380 696e9c5aaa736ea77dc3bc26f3a2c40e 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 420 1.4E-75 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 Gene3D G3DSA:1.10.260.40 1 56 1.8E-19 T 29-03-2018 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 SUPERFAMILY SSF53822 61 313 4.91E-39 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 SMART SM00354 1 73 6.1E-27 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 29-03-2018 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 Gene3D G3DSA:3.40.50.2300 57 177 1.2E-26 T 29-03-2018 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 SUPERFAMILY SSF47413 1 58 1.05E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 Gene3D G3DSA:3.40.50.2300 178 307 1.6E-13 T 29-03-2018 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.5E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 247 6.3E-13 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL539_RS18830 0408338df5e196b1ff820bc731f75dab 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 3.1E-150 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AL539_RS24030 4b2e9ca8187c6647506b97f6ee3549e8 266 Pfam PF13411 MerR HTH family regulatory protein 10 76 5.3E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS24030 4b2e9ca8187c6647506b97f6ee3549e8 266 Gene3D G3DSA:1.10.1660.10 3 198 3.4E-23 T 29-03-2018 AL539_RS24030 4b2e9ca8187c6647506b97f6ee3549e8 266 SMART SM00422 10 79 1.4E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS24030 4b2e9ca8187c6647506b97f6ee3549e8 266 SUPERFAMILY SSF46955 10 94 3.02E-17 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 SUPERFAMILY SSF47917 352 466 6.28E-51 T 29-03-2018 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.093 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 Gene3D G3DSA:1.10.1140.10 355 465 1.0E-40 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-20 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 Gene3D G3DSA:2.40.10.170 1 75 5.0E-31 T 29-03-2018 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 Gene3D G3DSA:3.40.50.300 76 354 8.2E-85 T 29-03-2018 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 SMART SM00382 142 334 2.9E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 2.3E-60 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 SUPERFAMILY SSF52540 77 355 6.77E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.9E-249 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS12145 66c46df2eff84735917474ea67ced57a 467 SUPERFAMILY SSF50615 1 75 1.65E-25 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS01700 11c1f29ff71f00bbf0ce5c0f6890e8ec 292 SUPERFAMILY SSF53850 90 291 1.02E-25 T 29-03-2018 AL539_RS01700 11c1f29ff71f00bbf0ce5c0f6890e8ec 292 Pfam PF03466 LysR substrate binding domain 90 247 3.8E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS01700 11c1f29ff71f00bbf0ce5c0f6890e8ec 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.2E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS01700 11c1f29ff71f00bbf0ce5c0f6890e8ec 292 SUPERFAMILY SSF46785 3 85 3.33E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01700 11c1f29ff71f00bbf0ce5c0f6890e8ec 292 Gene3D G3DSA:3.40.190.10 89 178 2.3E-12 T 29-03-2018 AL539_RS01700 11c1f29ff71f00bbf0ce5c0f6890e8ec 292 Gene3D G3DSA:1.10.10.10 1 84 1.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01700 11c1f29ff71f00bbf0ce5c0f6890e8ec 292 Gene3D G3DSA:3.40.190.10 179 252 1.0E-7 T 29-03-2018 AL539_RS21725 63234c9ee378ee833d8112d49a9c4276 183 SUPERFAMILY SSF51161 3 182 4.3E-42 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS21725 63234c9ee378ee833d8112d49a9c4276 183 SMART SM01266 4 56 4.1E-15 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL539_RS21725 63234c9ee378ee833d8112d49a9c4276 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL539_RS21725 63234c9ee378ee833d8112d49a9c4276 183 Pfam PF12464 Maltose acetyltransferase 6 55 5.8E-11 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL539_RS21725 63234c9ee378ee833d8112d49a9c4276 183 Gene3D G3DSA:2.160.10.10 1 183 1.1E-43 T 29-03-2018 AL539_RS21725 63234c9ee378ee833d8112d49a9c4276 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 126 159 4.2E-9 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS23530 799c8933d4d2a09cf111e1ea4a3a2e19 322 Gene3D G3DSA:3.40.190.10 195 281 1.1E-8 T 29-03-2018 AL539_RS23530 799c8933d4d2a09cf111e1ea4a3a2e19 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.7E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23530 799c8933d4d2a09cf111e1ea4a3a2e19 322 Gene3D G3DSA:1.10.10.10 1 92 2.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23530 799c8933d4d2a09cf111e1ea4a3a2e19 322 Pfam PF03466 LysR substrate binding domain 100 312 1.1E-10 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS23530 799c8933d4d2a09cf111e1ea4a3a2e19 322 Gene3D G3DSA:3.40.190.10 98 194 1.0E-6 T 29-03-2018 AL539_RS23530 799c8933d4d2a09cf111e1ea4a3a2e19 322 SUPERFAMILY SSF53850 98 314 3.98E-24 T 29-03-2018 AL539_RS23530 799c8933d4d2a09cf111e1ea4a3a2e19 322 SUPERFAMILY SSF46785 6 81 3.74E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12930 c37bd74887b7a5c0e3fb055a8389a3ae 404 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 402 4.8E-93 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL539_RS12930 c37bd74887b7a5c0e3fb055a8389a3ae 404 SUPERFAMILY SSF53067 151 239 1.02E-22 T 29-03-2018 AL539_RS12930 c37bd74887b7a5c0e3fb055a8389a3ae 404 Pfam PF05134 Type II secretion system (T2SS), protein L 9 241 3.1E-81 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AL539_RS12930 c37bd74887b7a5c0e3fb055a8389a3ae 404 PIRSF PIRSF015761 10 404 8.0E-37 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL539_RS12930 c37bd74887b7a5c0e3fb055a8389a3ae 404 Pfam PF12693 GspL periplasmic domain 245 403 3.7E-51 T 29-03-2018 IPR025691 GspL periplasmic domain AL539_RS12930 c37bd74887b7a5c0e3fb055a8389a3ae 404 SUPERFAMILY SSF53067 6 148 5.89E-42 T 29-03-2018 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 8.0E-13 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 8.0E-13 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 8.0E-13 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 8.0E-13 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 2.0E-32 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 Pfam PF00209 Sodium:neurotransmitter symporter family 10 120 2.5E-22 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS01850 db837b173b1b3a8d78b7d02e39f593df 476 SUPERFAMILY SSF161070 10 457 8.37E-129 T 29-03-2018 AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 SMART SM00862 147 221 7.6E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 Pfam PF00072 Response regulator receiver domain 4 112 5.3E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 Gene3D G3DSA:1.10.10.10 127 225 2.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 SUPERFAMILY SSF52172 1 124 3.98E-39 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 1.4E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 SUPERFAMILY SSF46894 123 222 4.54E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 SMART SM00448 2 113 1.6E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS06110 305e1892a7e0ed46726cb281f9a40d38 225 Gene3D G3DSA:3.40.50.2300 1 126 1.5E-34 T 29-03-2018 AL539_RS00035 bfb764a6e1736c0b281d4f6f59533c27 253 Pfam PF01609 Transposase DDE domain 85 248 7.8E-18 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL539_RS00035 bfb764a6e1736c0b281d4f6f59533c27 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.1E-23 T 29-03-2018 IPR025161 Putative transposase IS4/IS5 family AL539_RS00035 bfb764a6e1736c0b281d4f6f59533c27 253 Gene3D G3DSA:3.90.350.10 72 194 4.2E-5 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AL539_RS11355 ae11306c8d2fde163914c850a477ba7f 611 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 611 5.1E-247 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AL539_RS11355 ae11306c8d2fde163914c850a477ba7f 611 Pfam PF00593 TonB dependent receptor 198 609 1.2E-43 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS11355 ae11306c8d2fde163914c850a477ba7f 611 Gene3D G3DSA:2.40.170.20 155 611 3.6E-66 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS11355 ae11306c8d2fde163914c850a477ba7f 611 Gene3D G3DSA:2.170.130.10 19 153 1.9E-33 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS11355 ae11306c8d2fde163914c850a477ba7f 611 SUPERFAMILY SSF56935 30 611 2.93E-107 T 29-03-2018 AL539_RS11355 ae11306c8d2fde163914c850a477ba7f 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 148 4.5E-26 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS11355 ae11306c8d2fde163914c850a477ba7f 611 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 611 33.49 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AL539_RS24560 755e2de9069c854dc53afc15a4fa7e9d 167 SUPERFAMILY SSF144064 1 164 1.44E-55 T 29-03-2018 AL539_RS24560 755e2de9069c854dc53afc15a4fa7e9d 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 161 4.3E-33 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like AL539_RS24560 755e2de9069c854dc53afc15a4fa7e9d 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 10 161 3.6E-62 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like AL539_RS24560 755e2de9069c854dc53afc15a4fa7e9d 167 PIRSF PIRSF030840 1 167 3.3E-62 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like AL539_RS24560 755e2de9069c854dc53afc15a4fa7e9d 167 Gene3D G3DSA:3.40.1570.10 4 167 4.7E-43 T 29-03-2018 AL539_RS12855 5ff39052849e4f52dca2b2c7723cdc03 144 Gene3D G3DSA:3.50.80.10 1 144 8.8E-50 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AL539_RS12855 5ff39052849e4f52dca2b2c7723cdc03 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.322 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL539_RS12855 5ff39052849e4f52dca2b2c7723cdc03 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.7E-62 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL539_RS12855 5ff39052849e4f52dca2b2c7723cdc03 144 SUPERFAMILY SSF69500 2 143 1.83E-52 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AL539_RS12855 5ff39052849e4f52dca2b2c7723cdc03 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.9E-50 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL539_RS04820 a89a3d0d53ad0c4e5e13cd7029d30b5a 158 Gene3D G3DSA:3.30.500.20 3 108 2.5E-11 T 29-03-2018 AL539_RS04820 a89a3d0d53ad0c4e5e13cd7029d30b5a 158 SUPERFAMILY SSF160424 2 111 7.45E-14 T 29-03-2018 IPR006728 Protein of unknown function DUF600 AL539_RS04820 a89a3d0d53ad0c4e5e13cd7029d30b5a 158 Pfam PF04634 Protein of unknown function, DUF600 6 109 2.2E-7 T 29-03-2018 IPR006728 Protein of unknown function DUF600 AL539_RS23995 8c3ded3abb7674bcd16548ed420c64ff 376 SUPERFAMILY SSF111369 63 114 4.71E-6 T 29-03-2018 AL539_RS23995 8c3ded3abb7674bcd16548ed420c64ff 376 Gene3D G3DSA:1.20.1600.10 197 323 2.1E-9 T 29-03-2018 AL539_RS23995 8c3ded3abb7674bcd16548ed420c64ff 376 Gene3D G3DSA:2.40.50.100 63 140 1.3E-10 T 29-03-2018 AL539_RS23995 8c3ded3abb7674bcd16548ed420c64ff 376 Pfam PF13533 Biotin-lipoyl like 63 111 2.7E-10 T 29-03-2018 AL539_RS23995 8c3ded3abb7674bcd16548ed420c64ff 376 Gene3D G3DSA:1.10.287.470 141 192 1.7E-9 T 29-03-2018 AL539_RS13405 0608d6c807ff096a2c388841073159cf 256 Pfam PF00121 Triosephosphate isomerase 5 247 2.6E-87 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS13405 0608d6c807ff096a2c388841073159cf 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.812 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS13405 0608d6c807ff096a2c388841073159cf 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS13405 0608d6c807ff096a2c388841073159cf 256 SUPERFAMILY SSF51351 2 250 4.58E-89 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS13405 0608d6c807ff096a2c388841073159cf 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 3.4E-78 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS13405 0608d6c807ff096a2c388841073159cf 256 Gene3D G3DSA:3.20.20.70 1 256 4.6E-96 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS07010 cd787184de468ec2fcd8d415d27c688a 130 Pfam PF04304 Protein of unknown function (DUF454) 5 118 1.1E-37 T 29-03-2018 IPR007401 Protein of unknown function DUF454 AL539_RS07010 cd787184de468ec2fcd8d415d27c688a 130 PIRSF PIRSF016789 4 125 8.0E-42 T 29-03-2018 IPR007401 Protein of unknown function DUF454 AL539_RS09475 bbac2a1247173a9820e0cd9f80d5ff50 317 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 180 310 5.1E-9 T 29-03-2018 IPR019238 Transcriptional regulator, AbiEi 2 antitoxin, Type IV TA system AL539_RS09320 bbac2a1247173a9820e0cd9f80d5ff50 317 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 180 310 5.1E-9 T 29-03-2018 IPR019238 Transcriptional regulator, AbiEi 2 antitoxin, Type IV TA system AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 SUPERFAMILY SSF53474 3 268 1.8E-59 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.7E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.7E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.7E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 2.7E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 3.6E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 3.6E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 3.6E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 Pfam PF00561 alpha/beta hydrolase fold 23 129 2.8E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS14320 d7d86bfb7bc1bb7785df02df11f735b1 271 Gene3D G3DSA:3.40.50.1820 2 271 9.6E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS16100 dd942191327e767f34c9dc65d31071e7 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.582 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL539_RS16100 dd942191327e767f34c9dc65d31071e7 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.3E-28 T 29-03-2018 AL539_RS16100 dd942191327e767f34c9dc65d31071e7 105 Gene3D G3DSA:3.30.460.10 1 105 7.7E-35 T 29-03-2018 AL539_RS16100 dd942191327e767f34c9dc65d31071e7 105 SUPERFAMILY SSF81301 5 105 1.49E-38 T 29-03-2018 AL539_RS16100 dd942191327e767f34c9dc65d31071e7 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.2E-39 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL539_RS20195 738dd062c513a20af22b0bf07e6b1559 302 Gene3D G3DSA:3.20.20.100 2 302 7.6E-60 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS20195 738dd062c513a20af22b0bf07e6b1559 302 Pfam PF00248 Aldo/keto reductase family 17 291 1.8E-58 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS20195 738dd062c513a20af22b0bf07e6b1559 302 SUPERFAMILY SSF51430 7 293 5.24E-69 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS05845 78bab9e560d2bdf2d8de3ecfd0b79abc 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.2E-49 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05845 78bab9e560d2bdf2d8de3ecfd0b79abc 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS05845 78bab9e560d2bdf2d8de3ecfd0b79abc 377 SUPERFAMILY SSF47240 3 341 6.15E-111 T 29-03-2018 IPR009078 Ferritin-like superfamily AL539_RS05845 78bab9e560d2bdf2d8de3ecfd0b79abc 377 Gene3D G3DSA:1.10.620.20 1 347 3.8E-114 T 29-03-2018 AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 Gene3D G3DSA:3.10.610.10 48 159 3.1E-35 T 29-03-2018 AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 3.7E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 Pfam PF11612 Type II secretion system (T2SS), protein J 68 205 1.2E-40 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 Gene3D G3DSA:2.10.70.20 162 211 1.2E-15 T 29-03-2018 AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 38 1.6E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 16 207 8.0E-81 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 SUPERFAMILY SSF54523 51 213 6.67E-58 T 29-03-2018 AL539_RS12920 79e1b47d28ac429d8da94616a90536f7 225 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS19240 781837c5b25f53889df8b798fdc0fa7b 410 Pfam PF07690 Major Facilitator Superfamily 15 298 6.9E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS19240 781837c5b25f53889df8b798fdc0fa7b 410 Gene3D G3DSA:1.20.1250.20 213 409 2.4E-24 T 29-03-2018 AL539_RS19240 781837c5b25f53889df8b798fdc0fa7b 410 SUPERFAMILY SSF103473 9 398 7.46E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS19240 781837c5b25f53889df8b798fdc0fa7b 410 Gene3D G3DSA:1.20.1250.20 6 200 2.5E-22 T 29-03-2018 AL539_RS22710 8cbb8d7538241318a54a41a44e31fcd7 484 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.7E-10 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS22710 8cbb8d7538241318a54a41a44e31fcd7 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS22710 8cbb8d7538241318a54a41a44e31fcd7 484 Gene3D G3DSA:3.30.1360.60 6 83 2.1E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS22710 8cbb8d7538241318a54a41a44e31fcd7 484 SUPERFAMILY SSF55604 8 81 3.53E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS22710 8cbb8d7538241318a54a41a44e31fcd7 484 Pfam PF02378 Phosphotransferase system, EIIC 130 411 1.9E-31 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS04285 937da273c604c241a280be827a3493d9 398 Gene3D G3DSA:3.10.310.10 8 194 3.0E-84 T 29-03-2018 AL539_RS04285 937da273c604c241a280be827a3493d9 398 Gene3D G3DSA:3.10.310.10 195 375 2.1E-70 T 29-03-2018 AL539_RS04285 937da273c604c241a280be827a3493d9 398 SUPERFAMILY SSF54506 191 396 1.13E-75 T 29-03-2018 AL539_RS04285 937da273c604c241a280be827a3493d9 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 10 397 1.8E-234 T 29-03-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AL539_RS04285 937da273c604c241a280be827a3493d9 398 SUPERFAMILY SSF54506 9 186 6.98E-71 T 29-03-2018 AL539_RS04285 937da273c604c241a280be827a3493d9 398 Pfam PF04303 PrpF protein 11 393 2.3E-175 T 29-03-2018 IPR007400 PrpF protein AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 6.7E-138 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 43.685 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 SUPERFAMILY SSF51556 1 342 1.02E-146 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 Pfam PF01979 Amidohydrolase family 11 315 1.2E-21 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 PIRSF PIRSF001237 1 342 2.2E-142 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 Gene3D G3DSA:3.20.20.140 10 342 1.1E-56 T 29-03-2018 AL539_RS24460 a8312f7f86a5fefc96bec7f7fcbf803e 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 SUPERFAMILY SSF46689 207 254 7.89E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 Gene3D G3DSA:1.10.10.60 212 256 7.8E-8 T 29-03-2018 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 Pfam PF02311 AraC-like ligand binding domain 21 94 4.3E-5 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 SUPERFAMILY SSF46689 154 206 3.01E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 Gene3D G3DSA:2.60.120.280 2 163 1.3E-7 T 29-03-2018 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 SMART SM00342 171 253 1.1E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 Gene3D G3DSA:1.10.10.60 164 211 1.6E-9 T 29-03-2018 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 Pfam PF12833 Helix-turn-helix domain 177 254 8.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS19905 b691470ddd4e6ddf2111032d77713cb1 257 SUPERFAMILY SSF51182 29 77 1.07E-6 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS20130 00eb8edd444b9496bcdf71fe59e95637 943 Gene3D G3DSA:3.30.2080.10 775 923 4.4E-61 T 29-03-2018 AL539_RS20130 00eb8edd444b9496bcdf71fe59e95637 943 Gene3D G3DSA:1.20.1610.10 576 774 1.9E-39 T 29-03-2018 AL539_RS20130 00eb8edd444b9496bcdf71fe59e95637 943 Pfam PF07971 Glycosyl hydrolase family 92 320 910 1.6E-123 T 29-03-2018 IPR012939 Glycosyl hydrolase family 92 AL539_RS20130 00eb8edd444b9496bcdf71fe59e95637 943 SUPERFAMILY SSF48208 353 903 2.89E-10 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20130 00eb8edd444b9496bcdf71fe59e95637 943 Gene3D G3DSA:1.20.1050.60 459 575 1.3E-21 T 29-03-2018 AL539_RS20130 00eb8edd444b9496bcdf71fe59e95637 943 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 441 914 5.1E-98 T 29-03-2018 IPR005887 Alpha-1,2-mannosidase, putative AL539_RS20130 00eb8edd444b9496bcdf71fe59e95637 943 Gene3D G3DSA:2.70.98.10 82 408 4.2E-89 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL539_RS23175 994b85dbd8e7293b7ce66c21e1ee843b 431 Gene3D G3DSA:1.20.1250.20 12 209 2.4E-22 T 29-03-2018 AL539_RS23175 994b85dbd8e7293b7ce66c21e1ee843b 431 Pfam PF07690 Major Facilitator Superfamily 22 368 2.0E-29 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS23175 994b85dbd8e7293b7ce66c21e1ee843b 431 SUPERFAMILY SSF103473 12 414 7.32E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS23175 994b85dbd8e7293b7ce66c21e1ee843b 431 Gene3D G3DSA:1.20.1250.20 210 430 8.3E-23 T 29-03-2018 AL539_RS10460 101b0725c4c6e9615df12f997d542e70 313 Gene3D G3DSA:3.60.20.30 178 313 8.8E-45 T 29-03-2018 AL539_RS10460 101b0725c4c6e9615df12f997d542e70 313 Pfam PF01112 Asparaginase 7 310 2.0E-109 T 29-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AL539_RS10460 101b0725c4c6e9615df12f997d542e70 313 SUPERFAMILY SSF56235 5 308 1.32E-96 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14885 09b073b4ddda45747fd25fd130d80866 173 Pfam PF00293 NUDIX domain 7 145 6.3E-27 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS14885 09b073b4ddda45747fd25fd130d80866 173 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS14885 09b073b4ddda45747fd25fd130d80866 173 SUPERFAMILY SSF55811 6 152 8.39E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS14885 09b073b4ddda45747fd25fd130d80866 173 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 29-03-2018 IPR022927 RNA pyrophosphohydrolase RppH AL539_RS14885 09b073b4ddda45747fd25fd130d80866 173 Gene3D G3DSA:3.90.79.10 1 164 1.3E-33 T 29-03-2018 AL539_RS14885 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS14885 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 Pfam PF14559 Tetratricopeptide repeat 351 415 2.8E-9 T 29-03-2018 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 Gene3D G3DSA:3.30.2010.10 56 150 7.0E-16 T 29-03-2018 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 Gene3D G3DSA:1.25.20.10 384 481 6.0E-6 T 29-03-2018 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 Gene3D G3DSA:1.25.40.10 363 383 6.4E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 SUPERFAMILY SSF48452 310 454 7.59E-18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 Gene3D G3DSA:1.25.40.10 285 362 1.1E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 482 39.829 T 29-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 Pfam PF01435 Peptidase family M48 69 251 1.7E-27 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 SMART SM00028 340 373 21.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 SMART SM00028 306 339 24.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS07550 83db3ed79dcabb59ab66fefeed64d376 483 SMART SM00028 425 458 190.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS04670 c09480c22b6280bce9504af44e80dd33 531 Gene3D G3DSA:3.40.640.10 148 383 2.2E-25 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS04670 c09480c22b6280bce9504af44e80dd33 531 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 16 529 2.8E-220 T 29-03-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS04670 c09480c22b6280bce9504af44e80dd33 531 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 315 328 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL539_RS04670 c09480c22b6280bce9504af44e80dd33 531 Pfam PF00155 Aminotransferase class I and II 180 512 4.8E-24 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS04670 c09480c22b6280bce9504af44e80dd33 531 Gene3D G3DSA:3.90.1150.10 384 527 1.8E-14 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS04670 c09480c22b6280bce9504af44e80dd33 531 SUPERFAMILY SSF53383 143 341 1.24E-43 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS04670 c09480c22b6280bce9504af44e80dd33 531 SUPERFAMILY SSF53383 378 517 1.24E-43 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS08120 690957d34ceea8c8bdeaa6c11210dd23 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.0E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS08120 690957d34ceea8c8bdeaa6c11210dd23 308 Gene3D G3DSA:3.40.190.10 183 267 9.8E-16 T 29-03-2018 AL539_RS08120 690957d34ceea8c8bdeaa6c11210dd23 308 Gene3D G3DSA:3.40.190.10 91 182 8.0E-21 T 29-03-2018 AL539_RS08120 690957d34ceea8c8bdeaa6c11210dd23 308 Pfam PF03466 LysR substrate binding domain 90 294 2.6E-48 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS08120 690957d34ceea8c8bdeaa6c11210dd23 308 SUPERFAMILY SSF46785 5 114 6.43E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08120 690957d34ceea8c8bdeaa6c11210dd23 308 SUPERFAMILY SSF53850 92 296 1.24E-42 T 29-03-2018 AL539_RS08120 690957d34ceea8c8bdeaa6c11210dd23 308 Gene3D G3DSA:1.10.10.10 1 86 5.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 SUPERFAMILY SSF51735 173 420 2.91E-81 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 SMART SM01274 28 161 8.6E-75 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 Pfam PF00390 Malic enzyme, N-terminal domain 31 160 6.5E-27 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 PIRSF PIRSF000106 52 127 3.9E-10 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 PIRSF PIRSF000106 119 425 1.4E-63 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 Gene3D G3DSA:3.40.50.720 171 425 2.1E-84 T 29-03-2018 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 3.4E-26 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 Gene3D G3DSA:3.40.50.10380 15 170 1.2E-34 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 SMART SM00919 173 409 1.4E-142 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL539_RS10390 7e1dd2cd543a64c6f609c216f3e27684 425 SUPERFAMILY SSF53223 20 171 3.31E-52 T 29-03-2018 AL539_RS25005 b8f59c6a34431a6c66662e800818a786 352 SUPERFAMILY SSF56935 22 351 1.99E-52 T 29-03-2018 AL539_RS25005 b8f59c6a34431a6c66662e800818a786 352 Pfam PF13609 Gram-negative porin 8 336 1.6E-15 T 29-03-2018 AL539_RS25005 b8f59c6a34431a6c66662e800818a786 352 Gene3D G3DSA:2.40.160.10 6 351 9.5E-33 T 29-03-2018 AL539_RS10370 139fc8ebd2d9a8deb9420e8b7b443345 300 SUPERFAMILY SSF51730 22 294 5.69E-95 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AL539_RS10370 139fc8ebd2d9a8deb9420e8b7b443345 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 3.5E-100 T 29-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL539_RS10370 139fc8ebd2d9a8deb9420e8b7b443345 300 Gene3D G3DSA:3.20.20.220 1 298 1.0E-94 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AL539_RS10370 139fc8ebd2d9a8deb9420e8b7b443345 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.0E-102 T 29-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 Gene3D G3DSA:3.40.50.300 114 273 3.8E-32 T 29-03-2018 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 Pfam PF00270 DEAD/DEAH box helicase 125 271 4.1E-8 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 SUPERFAMILY SSF52540 112 638 2.14E-117 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 659 735 6.8E-23 T 29-03-2018 IPR011709 Domain of unknown function DUF1605 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 Pfam PF11898 Domain of unknown function (DUF3418) 749 1333 5.1E-232 T 29-03-2018 IPR024590 RNA helicase HrpA, C-terminal AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 Pfam PF04408 Helicase associated domain (HA2) 503 594 4.3E-18 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 Gene3D G3DSA:3.40.50.300 291 461 1.3E-45 T 29-03-2018 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 SMART SM00382 130 421 3.5E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 SMART SM00487 113 297 2.3E-31 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 SMART SM00847 501 596 3.2E-36 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 SMART SM00490 341 441 8.4E-15 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 52 1333 0.0 T 29-03-2018 IPR010222 RNA helicase HrpA GO:0004004 AL539_RS03295 94b34547b336a6839cd82f4e3d01db1d 1335 Pfam PF00271 Helicase conserved C-terminal domain 325 440 2.4E-11 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS04405 33bf09d444e46f9eff6cfe5e7ec1d9a5 297 SUPERFAMILY SSF140591 75 272 3.84E-49 T 29-03-2018 AL539_RS04405 33bf09d444e46f9eff6cfe5e7ec1d9a5 297 Pfam PF07201 HrpJ-like domain 60 226 3.2E-36 T 29-03-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 AL539_RS04405 33bf09d444e46f9eff6cfe5e7ec1d9a5 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 3.5E-80 T 29-03-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 AL539_RS14090 ed41a0a8b1c767510e9b2fb9213df987 527 SUPERFAMILY SSF52540 126 371 1.94E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14090 ed41a0a8b1c767510e9b2fb9213df987 527 Gene3D G3DSA:3.40.50.300 36 284 3.4E-9 T 29-03-2018 AL539_RS14090 ed41a0a8b1c767510e9b2fb9213df987 527 Pfam PF13401 AAA domain 123 270 1.1E-21 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 Gene3D G3DSA:3.40.710.10 387 782 2.5E-97 T 29-03-2018 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 728 5.8E-158 T 29-03-2018 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 Gene3D G3DSA:1.20.5.100 29 76 1.9E-13 T 29-03-2018 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 Gene3D G3DSA:3.30.2060.10 93 180 2.0E-28 T 29-03-2018 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 PIRSF PIRSF002799 13 790 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 SUPERFAMILY SSF53955 190 383 4.22E-69 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 49 772 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 Pfam PF00912 Transglycosylase 190 360 2.0E-59 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 Gene3D G3DSA:1.10.3810.10 193 386 1.0E-67 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 691 1.9E-23 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 SUPERFAMILY SSF56601 343 365 1.24E-109 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 SUPERFAMILY SSF56601 393 776 1.24E-109 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS08620 1655d70fcfbebed791a84f3fcd43ede1 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 4.2E-27 T 29-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL539_RS15540 7baae65da62d90c65daa9e0cbcd61924 57 Gene3D G3DSA:3.30.420.10 1 57 2.1E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS15540 7baae65da62d90c65daa9e0cbcd61924 57 SUPERFAMILY SSF53098 1 57 5.77E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS15540 7baae65da62d90c65daa9e0cbcd61924 57 Pfam PF00665 Integrase core domain 1 57 1.6E-7 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.242 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 Pfam PF00589 Phage integrase family 120 291 1.8E-53 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 SUPERFAMILY SSF56349 113 303 4.12E-57 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 1.8E-114 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 55.906 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 SUPERFAMILY SSF47823 11 107 1.33E-33 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 Gene3D G3DSA:1.10.150.130 12 119 2.6E-21 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 6.3E-19 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL539_RS14835 69f575a62285bcb8c2deeb715858ce93 305 Gene3D G3DSA:1.10.443.10 120 299 5.1E-49 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS07830 6f06393fd49a88e9923d85afdbd88d82 328 SUPERFAMILY SSF51735 1 262 1.72E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS07830 6f06393fd49a88e9923d85afdbd88d82 328 SUPERFAMILY SSF51735 292 326 1.72E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS07830 6f06393fd49a88e9923d85afdbd88d82 328 Gene3D G3DSA:3.40.50.720 1 328 1.6E-56 T 29-03-2018 AL539_RS07830 6f06393fd49a88e9923d85afdbd88d82 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 9.0E-34 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL539_RS00815 4170042e007ad041d2d0049d0c14d20b 338 Gene3D G3DSA:3.90.320.10 1 203 1.4E-37 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL539_RS00815 4170042e007ad041d2d0049d0c14d20b 338 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 5 158 3.9E-42 T 29-03-2018 IPR017482 Putative phage-type endonuclease AL539_RS00815 4170042e007ad041d2d0049d0c14d20b 338 Pfam PF09588 YqaJ-like viral recombinase domain 13 147 1.0E-20 T 29-03-2018 IPR019080 YqaJ viral recombinase AL539_RS00815 4170042e007ad041d2d0049d0c14d20b 338 SUPERFAMILY SSF52980 1 199 2.25E-49 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 6.8E-19 T 29-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.4E-86 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 SUPERFAMILY SSF88697 250 310 9.94E-15 T 29-03-2018 IPR015947 PUA-like domain AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 Gene3D G3DSA:3.30.2350.10 9 227 2.2E-80 T 29-03-2018 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.017 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 Gene3D G3DSA:2.30.130.10 249 311 5.5E-17 T 29-03-2018 IPR002478 PUA domain GO:0003723 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.8E-24 T 29-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 SUPERFAMILY SSF55120 9 247 5.18E-84 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08395 c1a83c849f737ae02c164418c938db47 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 8.5E-57 T 29-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 7.0E-19 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 7.0E-19 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 7.0E-19 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 7.0E-19 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 Gene3D G3DSA:3.30.70.1120 323 373 0.29 T 29-03-2018 AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.9E-33 T 29-03-2018 IPR018076 Type II secretion system F domain AL539_RS08745 bb8114988fb8e8a83656696bf64ba59d 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 4.8E-27 T 29-03-2018 IPR018076 Type II secretion system F domain AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 SMART SM00487 28 234 3.1E-56 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 Gene3D G3DSA:3.40.50.300 238 437 1.1E-45 T 29-03-2018 AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 Gene3D G3DSA:3.40.50.300 2 237 2.1E-52 T 29-03-2018 AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 SMART SM00490 270 351 1.2E-32 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 SUPERFAMILY SSF52540 85 363 6.29E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.05 T 29-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.1E-30 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS11690 e792a46784ffdf97d4b2f0090f93b434 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.3E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 Gene3D G3DSA:3.40.50.300 1 214 3.5E-66 T 29-03-2018 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 29-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.753 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 SUPERFAMILY SSF52540 1 193 5.43E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 Pfam PF00406 Adenylate kinase 5 185 2.6E-59 T 29-03-2018 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 7.1E-75 T 29-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL539_RS16665 1b2c78ce5b5689bab57bbf2a2874d664 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 29-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL539_RS03665 afd5e93d0016b1e69c8da2df70bcb6f0 299 Pfam PF15575 Immunity protein 49 77 283 1.5E-41 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS06105 9b3c43d0b67033e352e5971da974c55c 346 Pfam PF00535 Glycosyl transferase family 2 25 187 4.8E-33 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL539_RS06105 9b3c43d0b67033e352e5971da974c55c 346 Gene3D G3DSA:3.90.550.10 9 204 5.2E-34 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS06105 9b3c43d0b67033e352e5971da974c55c 346 SUPERFAMILY SSF53448 22 197 2.25E-36 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.4E-76 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.776 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 PIRSF PIRSF001259 3 369 4.0E-130 T 29-03-2018 AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 Pfam PF00925 GTP cyclohydrolase II 207 367 2.7E-40 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 Gene3D G3DSA:3.90.870.10 2 212 3.7E-96 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 SUPERFAMILY SSF142695 205 367 7.98E-48 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.9E-85 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL539_RS15895 5bd58a03a5b20d47cb44bd945f4bc17f 369 SUPERFAMILY SSF55821 3 202 2.22E-87 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS06395 75c59c2ef4f4b74e64af3281d00d5834 320 Pfam PF13177 DNA polymerase III, delta subunit 12 164 1.1E-44 T 29-03-2018 AL539_RS06395 75c59c2ef4f4b74e64af3281d00d5834 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 198 2.0E-64 T 29-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS06395 75c59c2ef4f4b74e64af3281d00d5834 320 SUPERFAMILY SSF52540 2 182 7.7E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06395 75c59c2ef4f4b74e64af3281d00d5834 320 Gene3D G3DSA:3.40.50.300 12 164 5.0E-23 T 29-03-2018 AL539_RS06395 75c59c2ef4f4b74e64af3281d00d5834 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 314 3.4E-19 T 29-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS06395 75c59c2ef4f4b74e64af3281d00d5834 320 SUPERFAMILY SSF48019 208 319 4.25E-13 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 Gene3D G3DSA:1.10.10.60 6 45 2.1E-13 T 29-03-2018 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.8E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.8E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 SUPERFAMILY SSF46689 2 73 1.64E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 Gene3D G3DSA:1.10.357.10 73 199 6.5E-18 T 29-03-2018 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 SUPERFAMILY SSF48498 81 193 1.74E-20 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 Gene3D G3DSA:1.10.10.60 46 72 3.6E-10 T 29-03-2018 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.1E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS24315 73eb0b2b18af33ea8cfd4f52ec98cc40 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 186 1.7E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS25915 7708a719edf25858690be2d489298acc 450 Gene3D G3DSA:3.30.420.40 218 429 9.9E-30 T 29-03-2018 AL539_RS25915 7708a719edf25858690be2d489298acc 450 SUPERFAMILY SSF53067 85 205 8.55E-26 T 29-03-2018 AL539_RS25915 7708a719edf25858690be2d489298acc 450 SUPERFAMILY SSF53067 1 44 8.55E-26 T 29-03-2018 AL539_RS25915 7708a719edf25858690be2d489298acc 450 SUPERFAMILY SSF53067 208 276 1.24E-32 T 29-03-2018 AL539_RS25915 7708a719edf25858690be2d489298acc 450 SUPERFAMILY SSF53067 328 447 1.24E-32 T 29-03-2018 AL539_RS25915 7708a719edf25858690be2d489298acc 450 Pfam PF00012 Hsp70 protein 129 259 9.5E-11 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS25915 7708a719edf25858690be2d489298acc 450 Gene3D G3DSA:3.30.420.40 1 217 5.6E-33 T 29-03-2018 AL539_RS25915 7708a719edf25858690be2d489298acc 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS24180 3d0312e79e319c7e5539322469fb59f0 655 Gene3D G3DSA:1.10.3470.10 2 330 1.6E-38 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS24180 3d0312e79e319c7e5539322469fb59f0 655 Gene3D G3DSA:1.10.3470.10 333 655 5.6E-46 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS24180 3d0312e79e319c7e5539322469fb59f0 655 SUPERFAMILY SSF81345 9 323 1.02E-55 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS24180 3d0312e79e319c7e5539322469fb59f0 655 Pfam PF01032 FecCD transport family 373 651 1.8E-68 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS24180 3d0312e79e319c7e5539322469fb59f0 655 Pfam PF01032 FecCD transport family 12 323 4.3E-62 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS24180 3d0312e79e319c7e5539322469fb59f0 655 SUPERFAMILY SSF81345 349 651 5.62E-63 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS09020 6d8adc7f6ab86e0d762890a86b4d0dac 244 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 1.9E-100 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL539_RS09020 6d8adc7f6ab86e0d762890a86b4d0dac 244 SUPERFAMILY SSF63892 4 242 1.16E-103 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL539_RS09020 6d8adc7f6ab86e0d762890a86b4d0dac 244 Gene3D G3DSA:3.20.20.70 4 238 6.4E-107 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS09020 6d8adc7f6ab86e0d762890a86b4d0dac 244 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.1E-106 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL539_RS09020 6d8adc7f6ab86e0d762890a86b4d0dac 244 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 134.575 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL539_RS21095 e0a0a622056a8a2b783bdeef263cffa6 219 Gene3D G3DSA:1.20.1440.100 18 78 5.0E-26 T 29-03-2018 AL539_RS21095 e0a0a622056a8a2b783bdeef263cffa6 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 3.9E-53 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL539_RS21095 e0a0a622056a8a2b783bdeef263cffa6 219 SUPERFAMILY SSF56784 1 210 4.07E-32 T 29-03-2018 IPR023214 HAD-like domain AL539_RS21095 e0a0a622056a8a2b783bdeef263cffa6 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 9.6E-29 T 29-03-2018 AL539_RS21095 e0a0a622056a8a2b783bdeef263cffa6 219 Gene3D G3DSA:3.40.50.1000 79 211 7.9E-10 T 29-03-2018 IPR023214 HAD-like domain AL539_RS21095 e0a0a622056a8a2b783bdeef263cffa6 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 7.6E-32 T 29-03-2018 AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 PRINTS PR01021 OMPA domain signature 119 135 5.9E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 PRINTS PR01021 OMPA domain signature 74 96 5.9E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 PRINTS PR01021 OMPA domain signature 104 119 5.9E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 Gene3D G3DSA:3.30.1330.60 20 174 4.3E-35 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 SUPERFAMILY SSF103088 57 173 1.01E-33 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 Pfam PF00691 OmpA family 73 168 3.8E-23 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS17830 457877dfe437a50a3fc8f3c2b4bf7b8d 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 1.9E-44 T 29-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AL539_RS14250 d283c5248bbbc54cd59abe1dcd3c28f7 271 Gene3D G3DSA:3.40.1350.10 89 213 3.2E-26 T 29-03-2018 AL539_RS14250 d283c5248bbbc54cd59abe1dcd3c28f7 271 SUPERFAMILY SSF57783 226 268 1.36E-6 T 29-03-2018 AL539_RS14250 d283c5248bbbc54cd59abe1dcd3c28f7 271 Gene3D G3DSA:3.30.65.10 218 270 2.3E-12 T 29-03-2018 AL539_RS14250 d283c5248bbbc54cd59abe1dcd3c28f7 271 SUPERFAMILY SSF52980 103 214 6.26E-29 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS14250 d283c5248bbbc54cd59abe1dcd3c28f7 271 Pfam PF04471 Restriction endonuclease 100 210 1.3E-27 T 29-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AL539_RS14250 d283c5248bbbc54cd59abe1dcd3c28f7 271 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 233 269 3.6E-9 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.7E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 SUPERFAMILY SSF53850 88 248 1.47E-19 T 29-03-2018 AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 SUPERFAMILY SSF46785 1 87 1.63E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 Gene3D G3DSA:1.10.10.10 1 83 3.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 Gene3D G3DSA:3.40.190.10 174 252 5.9E-7 T 29-03-2018 AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 Pfam PF03466 LysR substrate binding domain 88 238 1.1E-19 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS25860 938e398ed4794257f25eafc9b27cc75a 276 Gene3D G3DSA:3.40.190.10 90 173 1.6E-12 T 29-03-2018 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 SUPERFAMILY SSF158472 159 208 6.54E-5 T 29-03-2018 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 SMART SM00304 158 210 2.5E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 SMART SM00387 321 431 1.0E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 Gene3D G3DSA:1.10.287.130 201 272 4.5E-11 T 29-03-2018 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 429 7.6E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 SUPERFAMILY SSF55874 266 428 1.22E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 Gene3D G3DSA:3.30.565.10 288 432 1.8E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 SMART SM00388 211 276 1.3E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 SUPERFAMILY SSF47384 194 276 5.1E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 3.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 3.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 3.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 3.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20700 c57b0b24a4c7220aa49435371174eda1 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 1.6E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS02895 e995ebde2e7ad318c46f93eec845d175 211 Pfam PF01810 LysE type translocator 15 208 3.6E-33 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS02895 e995ebde2e7ad318c46f93eec845d175 211 PIRSF PIRSF006324 1 210 1.8E-55 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 8.8E-33 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL539_RS10870 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 29-03-2018 IPR011032 GroES-like AL539_RS15840 41154444295e6e2f9ff24b5c612f237c 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 5.2E-42 T 29-03-2018 IPR021768 Protein of unknown function DUF3332 AL539_RS22430 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS22430 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS21650 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS21650 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS05250 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS05250 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS15605 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS15605 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS13785 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS13785 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS10050 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS10050 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS24875 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS24875 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS23370 71c50d859ebd956c9b6b72527ef5b504 306 Pfam PF13737 Transposase DDE domain 19 129 1.2E-45 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS23370 71c50d859ebd956c9b6b72527ef5b504 306 Gene3D G3DSA:3.30.420.10 101 188 0.0027 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS05830 d34fbec3fdbd670f4a8ce26b7e0b86de 235 Gene3D G3DSA:3.40.50.150 1 235 4.2E-46 T 29-03-2018 AL539_RS05830 d34fbec3fdbd670f4a8ce26b7e0b86de 235 Pfam PF13489 Methyltransferase domain 52 201 4.4E-24 T 29-03-2018 AL539_RS05830 d34fbec3fdbd670f4a8ce26b7e0b86de 235 SUPERFAMILY SSF53335 15 232 8.44E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS05830 d34fbec3fdbd670f4a8ce26b7e0b86de 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 3.1E-85 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL539_RS05830 d34fbec3fdbd670f4a8ce26b7e0b86de 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 37.986 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL539_RS09600 3d36f28528e65482d5748b6ca5acad85 369 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 305 1.7E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS09600 3d36f28528e65482d5748b6ca5acad85 369 PIRSF PIRSF034888 1 368 2.0E-51 T 29-03-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 AL539_RS09600 3d36f28528e65482d5748b6ca5acad85 369 SUPERFAMILY SSF52540 2 304 3.75E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09600 3d36f28528e65482d5748b6ca5acad85 369 Pfam PF12476 Protein of unknown function (DUF3696) 318 368 6.6E-19 T 29-03-2018 IPR022532 Domain of unknown function DUF3696, C-terminal AL539_RS09600 3d36f28528e65482d5748b6ca5acad85 369 Gene3D G3DSA:3.40.50.300 1 335 5.1E-17 T 29-03-2018 AL539_RS09455 3d36f28528e65482d5748b6ca5acad85 369 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 305 1.7E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS09455 3d36f28528e65482d5748b6ca5acad85 369 PIRSF PIRSF034888 1 368 2.0E-51 T 29-03-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 AL539_RS09455 3d36f28528e65482d5748b6ca5acad85 369 SUPERFAMILY SSF52540 2 304 3.75E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09455 3d36f28528e65482d5748b6ca5acad85 369 Pfam PF12476 Protein of unknown function (DUF3696) 318 368 6.6E-19 T 29-03-2018 IPR022532 Domain of unknown function DUF3696, C-terminal AL539_RS09455 3d36f28528e65482d5748b6ca5acad85 369 Gene3D G3DSA:3.40.50.300 1 335 5.1E-17 T 29-03-2018 AL539_RS22625 83afb67bdfa0812b84a118510ff7f8e0 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.0E-34 T 29-03-2018 IPR021700 Protein of unknown function DUF3283 AL539_RS22625 83afb67bdfa0812b84a118510ff7f8e0 69 SUPERFAMILY SSF46575 1 63 4.58E-5 T 29-03-2018 AL539_RS22625 83afb67bdfa0812b84a118510ff7f8e0 69 Gene3D G3DSA:1.20.58.250 3 67 1.3E-18 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS24065 1fe58f023f8387160f8fc443898b8f2f 750 Gene3D G3DSA:2.60.120.260 587 726 2.4E-18 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS24065 1fe58f023f8387160f8fc443898b8f2f 750 SUPERFAMILY SSF55486 174 486 3.3E-41 T 29-03-2018 AL539_RS24065 1fe58f023f8387160f8fc443898b8f2f 750 Pfam PF01483 Proprotein convertase P-domain 621 705 1.5E-19 T 29-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 AL539_RS24065 1fe58f023f8387160f8fc443898b8f2f 750 SUPERFAMILY SSF49785 604 708 1.79E-17 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS11875 db847cacff4223d62bac296a448cc9aa 293 Gene3D G3DSA:1.10.10.10 1 65 2.2E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11875 db847cacff4223d62bac296a448cc9aa 293 Pfam PF13280 WYL domain 123 287 1.5E-15 T 29-03-2018 IPR026881 WYL domain AL539_RS12590 e717d2e67124a3ea3fb2d4d2d7fea652 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.716 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL539_RS12590 e717d2e67124a3ea3fb2d4d2d7fea652 259 Gene3D G3DSA:3.40.1630.10 3 56 2.5E-25 T 29-03-2018 AL539_RS12590 e717d2e67124a3ea3fb2d4d2d7fea652 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 2.3E-106 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL539_RS12590 e717d2e67124a3ea3fb2d4d2d7fea652 259 SUPERFAMILY SSF53335 4 255 3.3E-74 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS12590 e717d2e67124a3ea3fb2d4d2d7fea652 259 Gene3D G3DSA:3.40.50.150 57 259 6.7E-35 T 29-03-2018 AL539_RS18235 8fb09a1425fbd9dbfe0d2e7e36280c93 500 SMART SM00387 407 500 0.0013 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18235 8fb09a1425fbd9dbfe0d2e7e36280c93 500 Gene3D G3DSA:3.30.565.10 273 499 4.1E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18235 8fb09a1425fbd9dbfe0d2e7e36280c93 500 SUPERFAMILY SSF55874 372 498 6.28E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18235 8fb09a1425fbd9dbfe0d2e7e36280c93 500 Pfam PF07730 Histidine kinase 304 367 4.4E-11 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL539_RS18235 8fb09a1425fbd9dbfe0d2e7e36280c93 500 Pfam PF05231 MASE1 12 271 9.1E-14 T 29-03-2018 IPR007895 MASE1 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 Gene3D G3DSA:3.20.20.70 155 284 9.0E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 Gene3D G3DSA:3.90.1170.20 7 154 2.0E-43 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.3E-95 T 29-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 4.4E-59 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 1.5E-26 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 SUPERFAMILY SSF51690 130 294 1.77E-60 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 PIRSF PIRSF006250 16 295 5.4E-102 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AL539_RS08730 6fcad2a9c5643203efadd41e834056de 295 SUPERFAMILY SSF54675 15 128 7.06E-33 T 29-03-2018 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 Pfam PF03466 LysR substrate binding domain 85 281 2.0E-16 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 Gene3D G3DSA:3.40.190.10 89 172 8.6E-7 T 29-03-2018 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 Gene3D G3DSA:3.40.190.10 173 251 5.5E-14 T 29-03-2018 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 SUPERFAMILY SSF53850 86 284 3.08E-20 T 29-03-2018 AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 Gene3D G3DSA:1.10.10.10 2 84 1.6E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21365 1901f0c48d985b634b071ee7ed3d8d18 296 SUPERFAMILY SSF46785 3 81 1.96E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25505 03da42d933a155c6dfa14b7040ed101b 244 SUPERFAMILY SSF46785 11 77 3.96E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25505 03da42d933a155c6dfa14b7040ed101b 244 SUPERFAMILY SSF55781 87 240 4.12E-32 T 29-03-2018 IPR029016 GAF domain-like AL539_RS25505 03da42d933a155c6dfa14b7040ed101b 244 Gene3D G3DSA:1.10.10.10 2 95 7.8E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25505 03da42d933a155c6dfa14b7040ed101b 244 Pfam PF08279 HTH domain 17 56 9.2E-5 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AL539_RS25505 03da42d933a155c6dfa14b7040ed101b 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 5.5E-14 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AL539_RS25505 03da42d933a155c6dfa14b7040ed101b 244 Gene3D G3DSA:3.30.450.40 96 241 1.8E-34 T 29-03-2018 IPR029016 GAF domain-like AL539_RS24445 232076f304f09b0a6a09c9569e568a94 314 Gene3D G3DSA:1.10.3470.10 1 314 1.2E-42 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS24445 232076f304f09b0a6a09c9569e568a94 314 SUPERFAMILY SSF81345 5 310 1.83E-65 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS24445 232076f304f09b0a6a09c9569e568a94 314 Pfam PF01032 FecCD transport family 9 310 6.1E-65 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS00820 bdc9479665bb5c0de9b1415c2a23e2fa 319 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 219 311 3.9E-23 T 29-03-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal AL539_RS00820 bdc9479665bb5c0de9b1415c2a23e2fa 319 SMART SM00382 62 216 0.0029 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS00820 bdc9479665bb5c0de9b1415c2a23e2fa 319 Gene3D G3DSA:3.40.50.300 54 244 7.2E-21 T 29-03-2018 AL539_RS00820 bdc9479665bb5c0de9b1415c2a23e2fa 319 SUPERFAMILY SSF52540 32 284 3.16E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00820 bdc9479665bb5c0de9b1415c2a23e2fa 319 Pfam PF07728 AAA domain (dynein-related subfamily) 67 186 6.5E-19 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AL539_RS18230 8105e895525ec7afb6f1524499904ade 446 PIRSF PIRSF002808 7 443 1.8E-144 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL539_RS18230 8105e895525ec7afb6f1524499904ade 446 Gene3D G3DSA:1.20.1250.20 238 444 1.2E-27 T 29-03-2018 AL539_RS18230 8105e895525ec7afb6f1524499904ade 446 SUPERFAMILY SSF103473 17 441 1.83E-80 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS18230 8105e895525ec7afb6f1524499904ade 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 3.6E-139 T 29-03-2018 AL539_RS18230 8105e895525ec7afb6f1524499904ade 446 Gene3D G3DSA:1.20.1250.20 19 214 2.0E-34 T 29-03-2018 AL539_RS18230 8105e895525ec7afb6f1524499904ade 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AL539_RS18230 8105e895525ec7afb6f1524499904ade 446 Pfam PF07690 Major Facilitator Superfamily 36 396 5.2E-49 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS26105 8674fc83fc617bc0b5cedf9aaf0d429c 111 Pfam PF01627 Hpt domain 23 101 4.5E-5 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS26105 8674fc83fc617bc0b5cedf9aaf0d429c 111 Gene3D G3DSA:1.20.120.160 1 111 3.2E-10 T 29-03-2018 AL539_RS26105 8674fc83fc617bc0b5cedf9aaf0d429c 111 SUPERFAMILY SSF47226 1 110 9.55E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 PIRSF PIRSF000463 42 759 1.7E-286 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 SMART SM00642 282 627 2.2E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Gene3D G3DSA:2.60.40.10 37 134 1.9E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 SUPERFAMILY SSF81296 148 258 1.35E-26 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 SUPERFAMILY SSF51011 655 757 3.29E-28 T 29-03-2018 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Gene3D G3DSA:2.60.40.1180 666 758 7.6E-28 T 29-03-2018 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 SUPERFAMILY SSF81296 52 140 1.89E-10 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 160 238 2.7E-19 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Gene3D G3DSA:2.60.40.10 135 274 2.7E-29 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 147 755 2.8E-248 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 660 757 3.8E-16 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Pfam PF00128 Alpha amylase, catalytic domain 307 381 2.2E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 SUPERFAMILY SSF51445 277 652 1.24E-108 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Gene3D G3DSA:3.20.20.80 275 665 5.1E-76 T 29-03-2018 AL539_RS23285 941a8113a4dd611afb231982fe2883b9 759 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 123 758 41.467 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AL539_RS14735 9971c6b04ff17eff516e9ccb16fb136d 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 1.5E-18 T 29-03-2018 IPR021710 Protein of unknown function DUF3293 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 9.0E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 SUPERFAMILY SSF46785 4 65 3.03E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 SUPERFAMILY SSF100950 78 234 2.16E-31 T 29-03-2018 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 SMART SM01134 73 234 2.2E-58 T 29-03-2018 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 Gene3D G3DSA:3.40.50.1360 67 243 2.5E-34 T 29-03-2018 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 SMART SM00420 9 61 8.1E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 Gene3D G3DSA:1.10.10.10 1 66 9.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14070 91b7fec2b890bc035bb7e0a60971552b 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 2.5E-45 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 Gene3D G3DSA:2.30.30.30 2 93 1.8E-30 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 SMART SM00739 4 31 3.4E-4 T 29-03-2018 IPR005824 KOW AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 29-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 29-03-2018 IPR005824 KOW AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.099 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 9.9E-24 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 SUPERFAMILY SSF50104 4 101 3.74E-34 T 29-03-2018 IPR008991 Translation protein SH3-like domain AL539_RS13580 26bcca270fcfc63981ecf56ff9520e41 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.1E-40 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 Gene3D G3DSA:3.40.50.720 1 233 2.2E-59 T 29-03-2018 AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 SUPERFAMILY SSF51735 3 223 4.97E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 Pfam PF00106 short chain dehydrogenase 3 188 7.7E-53 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.0E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19895 9f65815d1c13f5008d7dd8a53731c972 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 162 0.0095 T 29-03-2018 AL539_RS16030 d36c6482bfbf7093a160d7cc98244100 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 6.6E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS16030 d36c6482bfbf7093a160d7cc98244100 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS16030 d36c6482bfbf7093a160d7cc98244100 474 Gene3D G3DSA:3.30.1360.60 5 78 1.9E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS16030 d36c6482bfbf7093a160d7cc98244100 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 7.2E-34 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS16030 d36c6482bfbf7093a160d7cc98244100 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 1.2E-205 T 29-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 AL539_RS16030 d36c6482bfbf7093a160d7cc98244100 474 SUPERFAMILY SSF55604 9 82 3.79E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS16030 d36c6482bfbf7093a160d7cc98244100 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.4E-14 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS07840 5a67c7f5a4b49e00e720cf3209cf5a4c 419 SUPERFAMILY SSF56801 151 257 2.01E-5 T 29-03-2018 AL539_RS07840 5a67c7f5a4b49e00e720cf3209cf5a4c 419 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 3 397 2.7E-110 T 29-03-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related AL539_RS07840 5a67c7f5a4b49e00e720cf3209cf5a4c 419 Gene3D G3DSA:3.40.50.980 123 254 6.7E-7 T 29-03-2018 AL539_RS06120 689cf89243d2b264997a3a3587f9980d 298 SUPERFAMILY SSF53686 9 295 1.7E-55 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS06120 689cf89243d2b264997a3a3587f9980d 298 PIRSF PIRSF006278 2 296 1.2E-22 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL539_RS06120 689cf89243d2b264997a3a3587f9980d 298 Gene3D G3DSA:3.40.50.1100 33 137 1.0E-15 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 SUPERFAMILY SSF51905 2 304 9.43E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 4.4E-20 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 4.4E-20 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 4.4E-20 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 4.4E-20 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.4E-20 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 Gene3D G3DSA:3.50.50.60 1 118 4.4E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 Gene3D G3DSA:3.50.50.60 119 248 6.4E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 284 1.2E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 Gene3D G3DSA:3.50.50.60 249 306 3.2E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 3.0E-12 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.0E-12 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 3.0E-12 T 29-03-2018 AL539_RS24285 c496ef78eef4b1d1b232b2f23e90579f 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 3.0E-12 T 29-03-2018 AL539_RS12545 72da84669bb6b0876c6f11bfc8b4c1c8 458 Pfam PF02447 GntP family permease 14 456 1.9E-117 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL539_RS12545 72da84669bb6b0876c6f11bfc8b4c1c8 458 PIRSF PIRSF002746 9 458 8.1E-145 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL539_RS12545 72da84669bb6b0876c6f11bfc8b4c1c8 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 457 5.9E-107 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL539_RS15175 96f14b74cb463d87c7ec915d108490c6 319 Gene3D G3DSA:3.40.190.10 172 318 7.6E-24 T 29-03-2018 AL539_RS15175 96f14b74cb463d87c7ec915d108490c6 319 Gene3D G3DSA:3.40.190.10 38 171 6.1E-26 T 29-03-2018 AL539_RS15175 96f14b74cb463d87c7ec915d108490c6 319 Pfam PF12849 PBP superfamily domain 34 290 2.6E-29 T 29-03-2018 IPR024370 PBP domain AL539_RS15175 96f14b74cb463d87c7ec915d108490c6 319 SUPERFAMILY SSF53850 38 317 2.96E-65 T 29-03-2018 AL539_RS15175 96f14b74cb463d87c7ec915d108490c6 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 305 2.4E-74 T 29-03-2018 IPR011862 Phosphate binding protein GO:0006810 AL539_RS25195 4a13c97327cc5d96cad6c89f34434cf5 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 78 165 2.9E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS25195 4a13c97327cc5d96cad6c89f34434cf5 204 Gene3D G3DSA:3.40.50.1000 4 190 2.6E-27 T 29-03-2018 IPR023214 HAD-like domain AL539_RS25195 4a13c97327cc5d96cad6c89f34434cf5 204 SUPERFAMILY SSF56784 10 199 7.09E-33 T 29-03-2018 IPR023214 HAD-like domain AL539_RS25195 4a13c97327cc5d96cad6c89f34434cf5 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 4.2E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS25195 4a13c97327cc5d96cad6c89f34434cf5 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 171 3.0E-17 T 29-03-2018 IPR023214 HAD-like domain AL539_RS02890 b392c595d4a5132666173f00c1028138 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 9 489 1.7E-96 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 3.4E-45 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 3.4E-45 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 3.4E-45 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 3.4E-45 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 3.4E-45 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 3.4E-45 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 3.4E-45 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 SUPERFAMILY SSF55486 1 490 4.4E-116 T 29-03-2018 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 PIRSF PIRSF006615 1 490 1.7E-199 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL539_RS02890 b392c595d4a5132666173f00c1028138 490 Gene3D G3DSA:1.10.1370.10 37 487 2.8E-30 T 29-03-2018 AL539_RS10075 22c4e625a8e1db7d6d68483d01aea494 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.7E-125 T 29-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AL539_RS10075 22c4e625a8e1db7d6d68483d01aea494 290 SUPERFAMILY SSF53448 2 271 4.59E-65 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS10075 22c4e625a8e1db7d6d68483d01aea494 290 Pfam PF00483 Nucleotidyl transferase 9 265 9.8E-33 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL539_RS10075 22c4e625a8e1db7d6d68483d01aea494 290 Gene3D G3DSA:3.90.550.10 3 272 1.1E-56 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS13525 5ab4bfc7ccc35b07d44ec7c994b4181a 209 SUPERFAMILY SSF50447 1 208 3.44E-84 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS13525 5ab4bfc7ccc35b07d44ec7c994b4181a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 29-03-2018 IPR019926 Ribosomal protein L3, conserved site AL539_RS13525 5ab4bfc7ccc35b07d44ec7c994b4181a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.2E-95 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13525 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.199 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13525 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Pfam PF00297 Ribosomal protein L3 93 182 2.1E-16 T 29-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13525 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Gene3D G3DSA:4.10.960.10 57 165 1.4E-35 T 29-03-2018 AL539_RS20190 ef97a0f23c48505f49d0cd28be1efcd8 334 SUPERFAMILY SSF103039 140 329 7.59E-39 T 29-03-2018 IPR028976 CheC-like domain AL539_RS20190 ef97a0f23c48505f49d0cd28be1efcd8 334 SUPERFAMILY SSF52172 4 120 2.42E-28 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS20190 ef97a0f23c48505f49d0cd28be1efcd8 334 Gene3D G3DSA:3.40.1550.10 185 314 2.7E-19 T 29-03-2018 IPR028976 CheC-like domain AL539_RS20190 ef97a0f23c48505f49d0cd28be1efcd8 334 Pfam PF00072 Response regulator receiver domain 5 115 1.5E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20190 ef97a0f23c48505f49d0cd28be1efcd8 334 Gene3D G3DSA:3.40.50.2300 2 123 1.7E-29 T 29-03-2018 AL539_RS20190 ef97a0f23c48505f49d0cd28be1efcd8 334 SMART SM00448 3 115 2.8E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20190 ef97a0f23c48505f49d0cd28be1efcd8 334 Gene3D G3DSA:3.40.1550.10 138 184 3.4E-9 T 29-03-2018 IPR028976 CheC-like domain AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 Gene3D G3DSA:1.10.357.10 64 204 5.5E-11 T 29-03-2018 AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 SUPERFAMILY SSF46689 3 69 4.24E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 148 201 2.8E-13 T 29-03-2018 AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.3E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 Gene3D G3DSA:1.10.10.60 6 63 2.8E-17 T 29-03-2018 AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.0E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS21910 bd5c1aec332464bd2bffce382169e392 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.0E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 Gene3D G3DSA:3.90.930.12 86 177 2.9E-39 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.9E-74 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 PIRSF PIRSF002162 1 177 3.9E-45 T 29-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 SUPERFAMILY SSF56053 83 177 2.82E-35 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 Pfam PF00347 Ribosomal protein L6 91 164 3.4E-19 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 Pfam PF00347 Ribosomal protein L6 11 82 9.4E-20 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 29-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 SUPERFAMILY SSF56053 1 82 1.07E-24 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.752 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL539_RS13600 58da39a82dfd52d4f58034d5d50d94aa 177 Gene3D G3DSA:3.90.930.12 5 85 1.1E-26 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS21665 f2c428c421dbc9e9948a00d081ce5db5 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 110 126 - T 29-03-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AL539_RS21665 f2c428c421dbc9e9948a00d081ce5db5 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 238 2.1E-50 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS21665 f2c428c421dbc9e9948a00d081ce5db5 239 SUPERFAMILY SSF51069 22 237 1.11E-74 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS21665 f2c428c421dbc9e9948a00d081ce5db5 239 Gene3D G3DSA:3.10.200.10 13 239 1.4E-68 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS21665 f2c428c421dbc9e9948a00d081ce5db5 239 SMART SM01057 23 239 7.7E-94 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 PIRSF PIRSF000097 100 264 2.3E-35 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 PIRSF PIRSF000097 1 107 4.3E-32 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 112 129 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 25 49 2.8E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 147 176 2.8E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 112 129 2.8E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 184 208 2.8E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 81 99 2.8E-44 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 SUPERFAMILY SSF51430 2 255 8.25E-83 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 Gene3D G3DSA:3.20.20.100 1 261 3.3E-85 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS04120 1177ed79026b755de7482dc1530a92b7 266 Pfam PF00248 Aldo/keto reductase family 10 249 4.6E-51 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 136 408 2.5E-115 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 382 395 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 SUPERFAMILY SSF52540 206 409 6.2E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 Pfam PF00448 SRP54-type protein, GTPase domain 209 408 2.3E-77 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 Pfam PF02881 SRP54-type protein, helical bundle domain 128 189 1.1E-13 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 Gene3D G3DSA:1.20.120.140 107 206 5.0E-24 T 29-03-2018 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 136 409 65.027 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 SMART SM00962 208 409 1.3E-123 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 SUPERFAMILY SSF47364 108 187 1.31E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 Gene3D G3DSA:3.40.50.300 207 410 1.5E-39 T 29-03-2018 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 SMART SM00963 113 193 4.9E-27 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS11455 1594bd25282ad8c96387779dabdd139c 412 SMART SM00382 207 399 1.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 PRINTS PR00147 DNA photolyase signature 336 354 6.9E-5 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 PRINTS PR00147 DNA photolyase signature 316 332 6.9E-5 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 SUPERFAMILY SSF52425 4 194 2.09E-43 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 Gene3D G3DSA:1.25.40.80 130 272 1.2E-17 T 29-03-2018 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 Pfam PF03441 FAD binding domain of DNA photolyase 266 463 3.0E-53 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 Gene3D G3DSA:1.10.579.10 273 468 2.4E-45 T 29-03-2018 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 Pfam PF00875 DNA photolyase 6 131 4.0E-22 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 SUPERFAMILY SSF48173 191 468 3.66E-76 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS23415 50e25d281f4f94ab29d72b0a4fed3045 493 Gene3D G3DSA:3.40.50.620 1 129 8.1E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS14260 3a65b0c0238f8c5d543de86fa6549ce5 548 SUPERFAMILY SSF52540 21 524 2.16E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14260 3a65b0c0238f8c5d543de86fa6549ce5 548 Gene3D G3DSA:3.40.50.300 16 222 1.9E-34 T 29-03-2018 AL539_RS14260 3a65b0c0238f8c5d543de86fa6549ce5 548 Pfam PF13361 UvrD-like helicase C-terminal domain 225 370 1.0E-8 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL539_RS14260 3a65b0c0238f8c5d543de86fa6549ce5 548 Pfam PF13361 UvrD-like helicase C-terminal domain 418 518 3.2E-14 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL539_RS14260 3a65b0c0238f8c5d543de86fa6549ce5 548 Pfam PF13245 AAA domain 25 201 2.0E-20 T 29-03-2018 AL539_RS14260 3a65b0c0238f8c5d543de86fa6549ce5 548 Gene3D G3DSA:3.40.50.300 223 547 5.8E-35 T 29-03-2018 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.081 T 29-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.2E-152 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 SUPERFAMILY SSF102114 123 374 8.11E-62 T 29-03-2018 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 SMART SM00729 147 367 5.5E-63 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 Gene3D G3DSA:3.80.30.20 144 381 3.0E-53 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 Pfam PF01938 TRAM domain 379 440 4.2E-17 T 29-03-2018 IPR002792 TRAM domain AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.8E-30 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS16145 ce2dc8d1484bdab4460aae1ed1942b79 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 4.3E-199 T 29-03-2018 AL539_RS17510 1522dd6909acddeb66401705916e290d 758 Gene3D G3DSA:3.20.70.20 1 758 6.6E-297 T 29-03-2018 AL539_RS17510 1522dd6909acddeb66401705916e290d 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 5.6E-207 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL539_RS17510 1522dd6909acddeb66401705916e290d 758 SUPERFAMILY SSF51998 4 757 2.08E-290 T 29-03-2018 AL539_RS17510 1522dd6909acddeb66401705916e290d 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_RS17510 1522dd6909acddeb66401705916e290d 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AL539_RS17510 1522dd6909acddeb66401705916e290d 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL539_RS17510 1522dd6909acddeb66401705916e290d 758 PIRSF PIRSF000379 5 758 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 PIRSF PIRSF001430 1 252 9.4E-77 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 SUPERFAMILY SSF55120 1 256 2.3E-93 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 Gene3D G3DSA:3.30.70.660 105 242 1.8E-37 T 29-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 8.7E-74 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 Gene3D G3DSA:3.30.70.580 1 104 1.5E-34 T 29-03-2018 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 Pfam PF01416 tRNA pseudouridine synthase 145 244 1.9E-29 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.3E-9 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07060 82fc7cf83111f1072a8938166212a492 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.93 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS07260 8da532ac4d8c877973d87cf81c1a7edf 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 3.2E-17 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL539_RS07260 8da532ac4d8c877973d87cf81c1a7edf 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 1.6E-20 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 Gene3D G3DSA:3.90.780.10 366 552 3.2E-47 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 Gene3D G3DSA:3.60.21.10 30 365 9.4E-83 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 PRINTS PR01607 Apyrase family signature 242 265 1.7E-50 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 PRINTS PR01607 Apyrase family signature 211 228 1.7E-50 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 PRINTS PR01607 Apyrase family signature 487 506 1.7E-50 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 PRINTS PR01607 Apyrase family signature 287 307 1.7E-50 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 PRINTS PR01607 Apyrase family signature 420 443 1.7E-50 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 PRINTS PR01607 Apyrase family signature 36 54 1.7E-50 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 SUPERFAMILY SSF56300 32 364 7.39E-95 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 2.5E-22 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 5.4E-34 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS16320 77fe4cc53cb312c6504f6d380fc693d7 560 SUPERFAMILY SSF55816 366 542 1.28E-52 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 SUPERFAMILY SSF46785 19 101 1.47E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 Gene3D G3DSA:3.40.190.10 198 281 9.0E-13 T 29-03-2018 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 Gene3D G3DSA:1.10.10.10 15 100 1.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 5.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 5.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 5.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 Gene3D G3DSA:3.40.190.10 109 197 4.9E-11 T 29-03-2018 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 2.2E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 SUPERFAMILY SSF53850 107 309 1.38E-19 T 29-03-2018 AL539_RS12560 38d78d01e55b7e1febd2e459ad8a2eda 310 Pfam PF03466 LysR substrate binding domain 107 308 2.8E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS15520 727c62b03ad6432cf6db4685049d2869 224 SUPERFAMILY SSF46689 173 217 1.25E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS15520 727c62b03ad6432cf6db4685049d2869 224 Gene3D G3DSA:1.10.10.60 177 223 7.0E-5 T 29-03-2018 AL539_RS15520 727c62b03ad6432cf6db4685049d2869 224 SMART SM00342 137 218 5.4E-11 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS15520 727c62b03ad6432cf6db4685049d2869 224 Gene3D G3DSA:2.60.120.10 11 176 1.8E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS15520 727c62b03ad6432cf6db4685049d2869 224 SUPERFAMILY SSF51215 19 60 1.96E-6 T 29-03-2018 AL539_RS15520 727c62b03ad6432cf6db4685049d2869 224 Pfam PF12833 Helix-turn-helix domain 143 217 1.4E-8 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.4E-162 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.061 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 Gene3D G3DSA:3.20.20.70 1 484 3.5E-118 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.9E-196 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 SMART SM01240 7 473 0.0 T 29-03-2018 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 SUPERFAMILY SSF54631 93 203 1.39E-26 T 29-03-2018 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 Pfam PF00571 CBS domain 149 201 3.8E-4 T 29-03-2018 IPR000644 CBS domain AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 Pfam PF00571 CBS domain 89 140 2.7E-10 T 29-03-2018 IPR000644 CBS domain AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 SMART SM00116 158 206 3.1E-5 T 29-03-2018 IPR000644 CBS domain AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 SMART SM00116 96 144 5.6E-12 T 29-03-2018 IPR000644 CBS domain AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 PIRSF PIRSF000130 1 488 2.5E-201 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 SUPERFAMILY SSF51412 217 477 4.06E-125 T 29-03-2018 AL539_RS15395 be0c82b3e5e57fb7a16b73b6acf587a8 488 SUPERFAMILY SSF51412 1 90 4.06E-125 T 29-03-2018 AL539_RS19620 30753a7f7c6f656b764f1e7165a419b4 376 SUPERFAMILY SSF52096 265 342 5.81E-56 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS19620 30753a7f7c6f656b764f1e7165a419b4 376 SUPERFAMILY SSF52096 18 198 5.81E-56 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS19620 30753a7f7c6f656b764f1e7165a419b4 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 356 7.2E-107 T 29-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AL539_RS19620 30753a7f7c6f656b764f1e7165a419b4 376 Gene3D G3DSA:3.90.226.10 5 350 5.9E-70 T 29-03-2018 AL539_RS20120 4c90a566fa2ffec4ba288e4fc009e4e6 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 1.7E-29 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS20120 4c90a566fa2ffec4ba288e4fc009e4e6 146 Gene3D G3DSA:3.40.930.10 1 146 7.9E-28 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS20120 4c90a566fa2ffec4ba288e4fc009e4e6 146 SUPERFAMILY SSF55804 1 144 5.62E-29 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS04880 fdbb59592de990a748fd96b455056787 54 Pfam PF11665 Protein of unknown function (DUF3265) 27 53 8.2E-10 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 Gene3D G3DSA:3.10.50.30 76 157 2.5E-28 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 5.5E-54 T 29-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 SUPERFAMILY SSF54534 81 156 3.79E-24 T 29-03-2018 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 PIRSF PIRSF006092 1 157 3.6E-48 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.24 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 SUPERFAMILY SSF46557 2 75 1.83E-25 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.4E-27 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.7E-25 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL539_RS08465 3937bfa93900d93eb8a763b69c8c8d86 157 Gene3D G3DSA:1.10.287.180 3 75 2.2E-26 T 29-03-2018 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 SMART SM00267 492 670 3.2E-40 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 Gene3D G3DSA:1.25.40.10 40 179 3.7E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 SUPERFAMILY SSF48452 185 295 4.38E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 534 665 5.2E-38 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 Gene3D G3DSA:1.25.40.10 182 239 7.0E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 SUPERFAMILY SSF55073 535 667 3.77E-41 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 Gene3D G3DSA:3.30.70.270 444 669 5.8E-54 T 29-03-2018 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 SMART SM00028 65 98 160.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 SMART SM00028 143 176 53.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 SMART SM00028 223 256 12.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 532 668 2.2E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 Gene3D G3DSA:1.10.150.200 240 284 2.2E-5 T 29-03-2018 AL539_RS19605 ac0decf21f48f5d3a7977c6d1f372b56 673 SUPERFAMILY SSF48452 65 218 8.34E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17755 fc59fad5cc16dc0da938f71f45adee97 289 SUPERFAMILY SSF117396 6 265 5.75E-75 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AL539_RS17755 fc59fad5cc16dc0da938f71f45adee97 289 Gene3D G3DSA:3.20.20.410 3 269 2.9E-72 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AL539_RS17755 fc59fad5cc16dc0da938f71f45adee97 289 Pfam PF01904 Protein of unknown function DUF72 24 262 1.7E-58 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 Gene3D G3DSA:3.80.30.10 68 246 2.0E-42 T 29-03-2018 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 PIRSF PIRSF000371 2 47 3.0E-11 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 PIRSF PIRSF000371 44 244 2.8E-45 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 SUPERFAMILY SSF102114 23 220 9.81E-30 T 29-03-2018 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 Pfam PF04055 Radical SAM superfamily 24 178 2.8E-32 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.3E-109 T 29-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 AL539_RS17500 f89e54ee973ce332e3c448662b6a8842 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 1.5E-20 T 29-03-2018 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 Gene3D G3DSA:3.40.190.10 92 176 7.8E-13 T 29-03-2018 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 SUPERFAMILY SSF53850 95 290 4.89E-34 T 29-03-2018 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 Gene3D G3DSA:1.10.10.10 2 88 7.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 SUPERFAMILY SSF46785 4 87 9.08E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 Gene3D G3DSA:3.40.190.10 177 261 1.4E-12 T 29-03-2018 AL539_RS08255 eb30b84480941ce54db4a1f20245b1cd 315 Pfam PF03466 LysR substrate binding domain 94 289 3.8E-27 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS13885 fe444241ac8de99f9e9504e11c3ad434 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 667 1.4E-76 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_RS13885 fe444241ac8de99f9e9504e11c3ad434 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 730 2.0E-214 T 29-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein AL539_RS13885 fe444241ac8de99f9e9504e11c3ad434 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.6E-69 T 29-03-2018 IPR021814 Protein of unknown function DUF3394 AL539_RS13080 6068722be77499b0db9a696b644588d7 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 5.1E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS13080 6068722be77499b0db9a696b644588d7 341 SUPERFAMILY SSF161098 107 321 2.22E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS13080 6068722be77499b0db9a696b644588d7 341 Gene3D G3DSA:1.10.3720.10 3 327 2.1E-37 T 29-03-2018 AL539_RS19040 2a31a6d898f0431e15258e7dfb8e9cd9 447 SUPERFAMILY SSF161093 279 446 1.01E-43 T 29-03-2018 AL539_RS19040 2a31a6d898f0431e15258e7dfb8e9cd9 447 SMART SM00924 36 139 9.4E-5 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_RS19040 2a31a6d898f0431e15258e7dfb8e9cd9 447 Gene3D G3DSA:1.10.220.30 7 144 0.0033 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS19040 2a31a6d898f0431e15258e7dfb8e9cd9 447 Gene3D G3DSA:1.10.357.20 277 447 5.6E-29 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS19040 2a31a6d898f0431e15258e7dfb8e9cd9 447 SUPERFAMILY SSF158791 18 136 6.15E-11 T 29-03-2018 AL539_RS19040 2a31a6d898f0431e15258e7dfb8e9cd9 447 Pfam PF01769 Divalent cation transporter 318 439 1.4E-23 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS19040 2a31a6d898f0431e15258e7dfb8e9cd9 447 Pfam PF03448 MgtE intracellular N domain 37 137 4.9E-13 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_RS17230 e35d932299a7a8508e41ef91de913d51 196 Gene3D G3DSA:1.10.357.10 65 195 6.0E-19 T 29-03-2018 AL539_RS17230 e35d932299a7a8508e41ef91de913d51 196 SUPERFAMILY SSF46689 5 79 1.89E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS17230 e35d932299a7a8508e41ef91de913d51 196 SUPERFAMILY SSF48498 82 195 1.38E-19 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS17230 e35d932299a7a8508e41ef91de913d51 196 Gene3D G3DSA:1.10.10.60 2 64 1.8E-8 T 29-03-2018 AL539_RS17230 e35d932299a7a8508e41ef91de913d51 196 Pfam PF13305 WHG domain 93 172 6.9E-11 T 29-03-2018 IPR025996 WHG domain AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 SUPERFAMILY SSF58104 244 553 3.53E-75 T 29-03-2018 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 SMART SM00304 222 276 2.9E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 518 2.5E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 Gene3D G3DSA:3.30.450.20 28 202 1.1E-38 T 29-03-2018 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 2.9E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 2.9E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 2.9E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 SMART SM01049 44 130 1.5E-22 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 Gene3D G3DSA:1.10.287.1060 253 335 0.0024 T 29-03-2018 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 Pfam PF17200 Single Cache domain 2 47 188 1.8E-30 T 29-03-2018 IPR033480 Single Cache domain 2 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 Gene3D G3DSA:1.10.287.950 336 553 8.8E-50 T 29-03-2018 AL539_RS22565 ec9d648e93aaf25f6ff0478aa790abbf 553 SMART SM00283 291 552 6.9E-75 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS19870 19b74beed0fc32af146be601bd634945 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 3.7E-14 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS19870 19b74beed0fc32af146be601bd634945 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 3.7E-14 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS19870 19b74beed0fc32af146be601bd634945 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 3.7E-14 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS19870 19b74beed0fc32af146be601bd634945 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 3.7E-14 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS19870 19b74beed0fc32af146be601bd634945 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 3.7E-14 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS19870 19b74beed0fc32af146be601bd634945 498 Pfam PF00361 Proton-conducting membrane transporter 129 413 9.8E-58 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS11395 0ad41e230946c72570fd20298e581459 206 Pfam PF01726 LexA DNA binding domain 1 65 4.4E-29 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AL539_RS11395 0ad41e230946c72570fd20298e581459 206 SUPERFAMILY SSF46785 3 69 3.14E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11395 0ad41e230946c72570fd20298e581459 206 Gene3D G3DSA:2.10.109.10 84 203 4.6E-26 T 29-03-2018 AL539_RS11395 0ad41e230946c72570fd20298e581459 206 SUPERFAMILY SSF51306 79 202 3.66E-36 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_RS11395 0ad41e230946c72570fd20298e581459 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 2.3E-80 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL539_RS11395 0ad41e230946c72570fd20298e581459 206 Pfam PF00717 Peptidase S24-like 118 183 1.8E-15 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_RS11395 0ad41e230946c72570fd20298e581459 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL539_RS11395 0ad41e230946c72570fd20298e581459 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL539_RS11395 0ad41e230946c72570fd20298e581459 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL539_RS11395 0ad41e230946c72570fd20298e581459 206 Gene3D G3DSA:1.10.10.10 1 70 4.4E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11395 0ad41e230946c72570fd20298e581459 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.663 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 PRINTS PR01021 OMPA domain signature 148 163 2.3E-12 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 PRINTS PR01021 OMPA domain signature 118 140 2.3E-12 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 PRINTS PR01021 OMPA domain signature 163 179 2.3E-12 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 Gene3D G3DSA:3.30.1330.60 78 222 7.5E-39 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 SUPERFAMILY SSF103088 106 221 3.14E-37 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 Pfam PF00691 OmpA family 118 212 5.1E-23 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 4.2E-7 T 29-03-2018 AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 4.2E-7 T 29-03-2018 AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 4.2E-7 T 29-03-2018 AL539_RS02200 7ca9165cbea9be21cc007276536fde23 222 Pfam PF13488 Glycine zipper 38 86 1.5E-10 T 29-03-2018 AL539_RS13920 73190f5cffccc6b596af9fd815dd8571 333 Gene3D G3DSA:1.10.600.10 2 333 4.0E-100 T 29-03-2018 IPR008949 Isoprenoid synthase domain AL539_RS13920 73190f5cffccc6b596af9fd815dd8571 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL539_RS13920 73190f5cffccc6b596af9fd815dd8571 333 Pfam PF00348 Polyprenyl synthetase 42 283 6.3E-73 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL539_RS13920 73190f5cffccc6b596af9fd815dd8571 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL539_RS13920 73190f5cffccc6b596af9fd815dd8571 333 SUPERFAMILY SSF48576 12 332 1.76E-98 T 29-03-2018 IPR008949 Isoprenoid synthase domain AL539_RS22815 af99124ebd4e7ce9603fb7414264a803 190 Gene3D G3DSA:3.40.630.30 10 190 4.3E-25 T 29-03-2018 AL539_RS22815 af99124ebd4e7ce9603fb7414264a803 190 Pfam PF13302 Acetyltransferase (GNAT) domain 18 162 1.2E-21 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS22815 af99124ebd4e7ce9603fb7414264a803 190 SUPERFAMILY SSF55729 14 187 8.66E-38 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS13495 53956c3e530c381328cac308aad56bae 182 Pfam PF05036 Sporulation related domain 108 177 2.6E-14 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS13495 53956c3e530c381328cac308aad56bae 182 Gene3D G3DSA:3.30.70.1070 108 181 2.8E-12 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS13495 53956c3e530c381328cac308aad56bae 182 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 101 179 1.8E-32 T 29-03-2018 IPR011930 Cell division protein FtsN GO:0005515 AL539_RS13495 53956c3e530c381328cac308aad56bae 182 SUPERFAMILY SSF110997 107 179 5.1E-17 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 SMART SM00448 4 117 6.3E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 SMART SM00421 139 196 7.0E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 SUPERFAMILY SSF46894 134 196 4.08E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 5.3E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.2E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.2E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.2E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 Gene3D G3DSA:3.40.50.2300 1 145 1.1E-24 T 29-03-2018 AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 SUPERFAMILY SSF52172 5 127 1.24E-25 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 Gene3D G3DSA:1.10.10.10 146 198 2.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19185 d91a31b4af9cf65a1473e30e38d24bd1 198 Pfam PF00072 Response regulator receiver domain 7 117 1.1E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS21135 d13900e15a36a9d98ca6509c7723026d 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 372 1.6E-37 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS21135 d13900e15a36a9d98ca6509c7723026d 385 Gene3D G3DSA:2.40.50.100 181 343 1.7E-5 T 29-03-2018 AL539_RS21135 d13900e15a36a9d98ca6509c7723026d 385 SUPERFAMILY SSF111369 61 236 1.44E-21 T 29-03-2018 AL539_RS21135 d13900e15a36a9d98ca6509c7723026d 385 Pfam PF13533 Biotin-lipoyl like 72 120 7.7E-6 T 29-03-2018 AL539_RS21135 d13900e15a36a9d98ca6509c7723026d 385 Gene3D G3DSA:2.40.50.100 69 145 6.0E-13 T 29-03-2018 AL539_RS21135 d13900e15a36a9d98ca6509c7723026d 385 Gene3D G3DSA:2.40.50.100 146 180 0.25 T 29-03-2018 AL539_RS21135 d13900e15a36a9d98ca6509c7723026d 385 Pfam PF13437 HlyD family secretion protein 184 293 5.0E-9 T 29-03-2018 AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 SUPERFAMILY SSF53335 12 298 5.47E-127 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 SUPERFAMILY SSF53335 329 551 5.47E-127 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 Pfam PF12161 HsdM N-terminal domain 14 143 4.7E-26 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 Gene3D G3DSA:3.40.50.150 177 512 1.6E-59 T 29-03-2018 AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 Pfam PF02384 N-6 DNA Methylase 156 516 9.3E-94 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 217 2.5E-19 T 29-03-2018 AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 179 195 2.5E-19 T 29-03-2018 AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 284 296 2.5E-19 T 29-03-2018 AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 341 365 2.5E-19 T 29-03-2018 AL539_RS15665 caeb113cbd0bd4e9c2117cd50be05b38 553 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 287 293 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS23575 de20e99e0e4df67f638265b94c34fde9 224 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 211 1.1E-43 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL539_RS23575 de20e99e0e4df67f638265b94c34fde9 224 SUPERFAMILY SSF51569 3 216 4.08E-61 T 29-03-2018 AL539_RS23575 de20e99e0e4df67f638265b94c34fde9 224 Gene3D G3DSA:3.20.20.70 2 221 9.6E-53 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS23575 de20e99e0e4df67f638265b94c34fde9 224 ProSitePatterns PS01054 Transaldolase signature 1. 25 33 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 Gene3D G3DSA:3.40.50.300 284 385 1.1E-23 T 29-03-2018 AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 29-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 SUPERFAMILY SSF52540 8 643 1.88E-179 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 Gene3D G3DSA:3.40.50.300 6 147 1.7E-26 T 29-03-2018 AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 Gene3D G3DSA:3.40.50.300 150 283 3.7E-31 T 29-03-2018 AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 2.7E-78 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 Gene3D G3DSA:3.40.50.300 386 672 3.3E-53 T 29-03-2018 AL539_RS11745 677a184d257a27a88388c9e353a110f0 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 4.5E-74 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 SUPERFAMILY SSF54909 63 145 1.74E-16 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 Gene3D G3DSA:1.10.10.10 1 52 1.8E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 SUPERFAMILY SSF46785 1 60 5.47E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 2.8E-16 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.1E-18 T 29-03-2018 AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.7E-17 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.7E-17 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.7E-17 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 SMART SM00344 1 110 1.5E-36 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS22325 8e5db677a77346ab5b106402047a7c20 146 Gene3D G3DSA:3.30.70.920 53 146 5.2E-21 T 29-03-2018 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 1.9E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 Gene3D G3DSA:1.10.287.130 117 184 7.4E-6 T 29-03-2018 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 6.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 6.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 6.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 6.7E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 SMART SM00388 122 188 3.4E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 SMART SM00387 231 337 2.7E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 Pfam PF13188 PAS domain 18 69 3.1E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 SUPERFAMILY SSF47384 111 188 8.24E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 Gene3D G3DSA:3.30.450.20 2 116 1.6E-7 T 29-03-2018 AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 Gene3D G3DSA:3.30.565.10 189 343 3.1E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 SUPERFAMILY SSF55874 177 336 7.07E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 SUPERFAMILY SSF55785 18 85 2.99E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS07425 5d13c4d077ed853b67c4490f7a5b7d90 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 4.3E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06040 0b8710a82320c38c03c00fc487556c36 98 Pfam PF03795 YCII-related domain 1 95 2.1E-29 T 29-03-2018 IPR005545 YCII-related AL539_RS06040 0b8710a82320c38c03c00fc487556c36 98 SUPERFAMILY SSF54909 1 98 6.08E-33 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS06040 0b8710a82320c38c03c00fc487556c36 98 Gene3D G3DSA:3.30.70.1060 1 98 9.0E-29 T 29-03-2018 AL539_RS07850 1fd387594d17985f31bd0edb126908f6 357 Gene3D G3DSA:3.40.630.30 169 334 2.6E-4 T 29-03-2018 AL539_RS12125 6209c648ac4ba7d3f04afbfcce5e865d 258 Gene3D G3DSA:3.40.190.10 180 258 2.7E-5 T 29-03-2018 AL539_RS12125 6209c648ac4ba7d3f04afbfcce5e865d 258 SMART SM00062 33 257 3.8E-39 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS12125 6209c648ac4ba7d3f04afbfcce5e865d 258 SUPERFAMILY SSF53850 1 256 5.7E-51 T 29-03-2018 AL539_RS12125 6209c648ac4ba7d3f04afbfcce5e865d 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL539_RS12125 6209c648ac4ba7d3f04afbfcce5e865d 258 Gene3D G3DSA:3.40.190.10 22 179 6.2E-32 T 29-03-2018 AL539_RS12125 6209c648ac4ba7d3f04afbfcce5e865d 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 4.1E-38 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS16270 87f80d3240bf802d7aea0100b6a6ec6c 196 SUPERFAMILY SSF53178 5 194 2.22E-69 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL539_RS16270 87f80d3240bf802d7aea0100b6a6ec6c 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL539_RS16270 87f80d3240bf802d7aea0100b6a6ec6c 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL539_RS16270 87f80d3240bf802d7aea0100b6a6ec6c 196 Gene3D G3DSA:3.40.50.1470 1 196 3.8E-70 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL539_RS16270 87f80d3240bf802d7aea0100b6a6ec6c 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.648 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL539_RS16270 87f80d3240bf802d7aea0100b6a6ec6c 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 2.2E-53 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL539_RS16270 87f80d3240bf802d7aea0100b6a6ec6c 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.3E-68 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL539_RS23115 98470063a9d84498d09bceb9ef0e7bfa 324 SUPERFAMILY SSF54427 12 152 1.45E-25 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS23115 98470063a9d84498d09bceb9ef0e7bfa 324 Pfam PF07366 SnoaL-like polyketide cyclase 20 144 2.4E-10 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL539_RS23115 98470063a9d84498d09bceb9ef0e7bfa 324 SUPERFAMILY SSF54427 190 319 2.86E-21 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS23115 98470063a9d84498d09bceb9ef0e7bfa 324 Gene3D G3DSA:3.10.450.50 192 322 5.7E-12 T 29-03-2018 AL539_RS23115 98470063a9d84498d09bceb9ef0e7bfa 324 Gene3D G3DSA:3.10.450.50 22 147 3.5E-12 T 29-03-2018 AL539_RS25795 3174cc6d0852ac7dfb637e8970397aaf 486 SUPERFAMILY SSF53720 6 484 1.14E-148 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS25795 3174cc6d0852ac7dfb637e8970397aaf 486 Pfam PF00171 Aldehyde dehydrogenase family 24 480 1.8E-149 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS25795 3174cc6d0852ac7dfb637e8970397aaf 486 Gene3D G3DSA:3.40.309.10 270 466 2.3E-56 T 29-03-2018 AL539_RS25795 3174cc6d0852ac7dfb637e8970397aaf 486 Gene3D G3DSA:3.40.605.10 2 269 1.9E-84 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:3.40.50.300 137 314 5.0E-28 T 29-03-2018 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:3.40.50.2300 3 135 1.0E-33 T 29-03-2018 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SUPERFAMILY SSF46689 382 466 1.43E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SMART SM00382 162 316 1.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SUPERFAMILY SSF52540 141 385 8.53E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SUPERFAMILY SSF52172 2 187 2.13E-43 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 3.5E-237 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:1.10.10.60 387 467 7.7E-24 T 29-03-2018 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SMART SM00448 4 115 3.1E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.7E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS12815 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:1.10.8.60 315 386 1.7E-21 T 29-03-2018 AL539_RS10605 929d4ed00aae18027d679584172d0891 141 Pfam PF02082 Transcriptional regulator 1 82 1.0E-23 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AL539_RS10605 929d4ed00aae18027d679584172d0891 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AL539_RS10605 929d4ed00aae18027d679584172d0891 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.97 T 29-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 AL539_RS10605 929d4ed00aae18027d679584172d0891 141 Gene3D G3DSA:1.10.10.10 1 135 4.9E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10605 929d4ed00aae18027d679584172d0891 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 5.4E-37 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AL539_RS10605 929d4ed00aae18027d679584172d0891 141 SUPERFAMILY SSF46785 2 131 2.73E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21635 d12b625b01c51f35493db65a2aa3a544 462 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 456 3.0E-83 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AL539_RS21635 d12b625b01c51f35493db65a2aa3a544 462 Gene3D G3DSA:1.20.1600.10 27 457 3.4E-83 T 29-03-2018 AL539_RS21635 d12b625b01c51f35493db65a2aa3a544 462 SUPERFAMILY SSF56954 3 457 3.01E-94 T 29-03-2018 AL539_RS21635 d12b625b01c51f35493db65a2aa3a544 462 Pfam PF02321 Outer membrane efflux protein 66 248 6.7E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS21635 d12b625b01c51f35493db65a2aa3a544 462 Pfam PF02321 Outer membrane efflux protein 281 455 4.8E-19 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS04195 173f0b4ce18729001c932c5c3dc60879 262 SMART SM00062 32 255 5.9E-59 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS04195 173f0b4ce18729001c932c5c3dc60879 262 Gene3D G3DSA:3.40.190.10 154 262 1.5E-21 T 29-03-2018 AL539_RS04195 173f0b4ce18729001c932c5c3dc60879 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 253 5.0E-60 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS04195 173f0b4ce18729001c932c5c3dc60879 262 SMART SM00079 32 254 4.4E-4 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL539_RS04195 173f0b4ce18729001c932c5c3dc60879 262 SUPERFAMILY SSF53850 1 255 1.77E-70 T 29-03-2018 AL539_RS04195 173f0b4ce18729001c932c5c3dc60879 262 Gene3D G3DSA:3.40.190.10 3 153 3.3E-33 T 29-03-2018 AL539_RS18635 4b71e07474fa2bda706bf8f04a10288e 411 Gene3D G3DSA:2.40.160.60 21 411 2.4E-75 T 29-03-2018 AL539_RS18635 4b71e07474fa2bda706bf8f04a10288e 411 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 410 1.2E-130 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL539_RS18635 4b71e07474fa2bda706bf8f04a10288e 411 SUPERFAMILY SSF56935 22 410 3.2E-94 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82693 40 134 7.32E-25 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 Gene3D G3DSA:3.30.2090.10 181 266 3.3E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 Gene3D G3DSA:3.30.2090.10 703 789 7.2E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 Gene3D G3DSA:3.30.70.1430 556 655 7.6E-11 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82714 183 266 1.57E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82866 794 1009 1.7E-49 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.7E-279 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82866 290 488 1.05E-44 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.5E-73 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 Gene3D G3DSA:1.20.1640.10 790 1012 1.9E-43 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 Gene3D G3DSA:1.20.1640.10 267 491 7.4E-42 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82714 704 788 1.44E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82693 139 181 1.31E-17 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82693 268 324 1.31E-17 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 SUPERFAMILY SSF82693 554 657 2.62E-17 T 29-03-2018 AL539_RS17280 b28d4c6c6f00b753124a2e1b19569aec 1037 Gene3D G3DSA:3.30.70.1430 40 141 4.5E-28 T 29-03-2018 AL539_RS05060 48c83c0ddced4fc150183c03249a66c9 237 SUPERFAMILY SSF53335 4 203 2.17E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS05060 48c83c0ddced4fc150183c03249a66c9 237 Gene3D G3DSA:3.40.50.150 2 213 9.1E-29 T 29-03-2018 AL539_RS05060 48c83c0ddced4fc150183c03249a66c9 237 Pfam PF13847 Methyltransferase domain 48 170 4.2E-15 T 29-03-2018 IPR025714 Methyltransferase domain AL539_RS04125 6ebb0a4e37f359e699cf4da97a3d4062 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04125 6ebb0a4e37f359e699cf4da97a3d4062 301 SUPERFAMILY SSF46785 4 113 7.75E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04125 6ebb0a4e37f359e699cf4da97a3d4062 301 Pfam PF03466 LysR substrate binding domain 91 292 3.8E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS04125 6ebb0a4e37f359e699cf4da97a3d4062 301 Gene3D G3DSA:3.40.190.10 178 263 3.9E-20 T 29-03-2018 AL539_RS04125 6ebb0a4e37f359e699cf4da97a3d4062 301 SUPERFAMILY SSF53850 91 294 6.05E-36 T 29-03-2018 AL539_RS04125 6ebb0a4e37f359e699cf4da97a3d4062 301 Gene3D G3DSA:1.10.10.10 1 85 1.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04125 6ebb0a4e37f359e699cf4da97a3d4062 301 Gene3D G3DSA:3.40.190.10 93 177 2.2E-13 T 29-03-2018 AL539_RS08720 80727399328b8536e8c48242e40699d3 255 SUPERFAMILY SSF48008 98 235 3.14E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS08720 80727399328b8536e8c48242e40699d3 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS08720 80727399328b8536e8c48242e40699d3 255 SUPERFAMILY SSF46785 5 76 2.13E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08720 80727399328b8536e8c48242e40699d3 255 SMART SM00345 15 74 9.1E-28 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS08720 80727399328b8536e8c48242e40699d3 255 Gene3D G3DSA:1.10.10.10 1 76 1.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08720 80727399328b8536e8c48242e40699d3 255 Pfam PF07729 FCD domain 99 226 4.3E-18 T 29-03-2018 IPR011711 GntR, C-terminal AL539_RS08720 80727399328b8536e8c48242e40699d3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS08720 80727399328b8536e8c48242e40699d3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS08720 80727399328b8536e8c48242e40699d3 255 Gene3D G3DSA:1.20.120.530 82 245 8.8E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS08720 80727399328b8536e8c48242e40699d3 255 SMART SM00895 99 227 8.8E-18 T 29-03-2018 IPR011711 GntR, C-terminal AL539_RS21970 4345f15f253082aabafee29f5328d659 242 SUPERFAMILY SSF52540 5 225 5.62E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21970 4345f15f253082aabafee29f5328d659 242 Pfam PF00005 ABC transporter 21 164 8.3E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS21970 4345f15f253082aabafee29f5328d659 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS21970 4345f15f253082aabafee29f5328d659 242 Gene3D G3DSA:3.40.50.300 1 241 1.4E-48 T 29-03-2018 AL539_RS21970 4345f15f253082aabafee29f5328d659 242 SMART SM00382 30 212 4.5E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS07040 a020b0dafd35c5de28eca3f9e813abf2 197 Pfam PF05036 Sporulation related domain 121 189 1.4E-11 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS07040 a020b0dafd35c5de28eca3f9e813abf2 197 Gene3D G3DSA:3.30.70.1070 116 186 1.2E-10 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS07040 a020b0dafd35c5de28eca3f9e813abf2 197 SUPERFAMILY SSF110997 120 193 4.58E-15 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS20865 85f3cf2762d1cf35e31e6df91916e600 300 Gene3D G3DSA:3.40.190.10 176 259 2.4E-22 T 29-03-2018 AL539_RS20865 85f3cf2762d1cf35e31e6df91916e600 300 Gene3D G3DSA:3.40.190.10 87 175 2.2E-17 T 29-03-2018 AL539_RS20865 85f3cf2762d1cf35e31e6df91916e600 300 SUPERFAMILY SSF46785 1 111 1.86E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20865 85f3cf2762d1cf35e31e6df91916e600 300 Gene3D G3DSA:1.10.10.10 1 83 5.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20865 85f3cf2762d1cf35e31e6df91916e600 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20865 85f3cf2762d1cf35e31e6df91916e600 300 Pfam PF03466 LysR substrate binding domain 88 287 6.7E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS20865 85f3cf2762d1cf35e31e6df91916e600 300 SUPERFAMILY SSF53850 89 293 1.76E-46 T 29-03-2018 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 6.7E-12 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SMART SM01086 655 744 2.8E-35 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:1.10.8.60 353 476 1.2E-27 T 29-03-2018 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SUPERFAMILY SSF52540 170 425 3.5E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SUPERFAMILY SSF52540 439 742 1.22E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SUPERFAMILY SSF81923 1 142 9.16E-59 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:3.40.50.300 167 352 2.5E-25 T 29-03-2018 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:1.10.1780.10 1 143 2.9E-26 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:1.10.8.60 661 755 1.9E-22 T 29-03-2018 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SMART SM00382 208 353 2.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SMART SM00382 489 656 5.8E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 4.8E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 29-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:3.40.50.300 477 660 2.9E-30 T 29-03-2018 AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 1.4E-23 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AL539_RS17610 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 2.1E-47 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS00720 85408078deee9604e1f17a805d33fca9 277 Gene3D G3DSA:3.20.20.70 5 253 1.4E-127 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS00720 85408078deee9604e1f17a805d33fca9 277 Gene3D G3DSA:1.20.5.460 254 275 6.3E-11 T 29-03-2018 AL539_RS00720 85408078deee9604e1f17a805d33fca9 277 SUPERFAMILY SSF51621 7 198 1.51E-84 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS00720 85408078deee9604e1f17a805d33fca9 277 PIRSF PIRSF034452 2 277 3.0E-158 T 29-03-2018 IPR009215 TIM-barrel domain, IGPS-like AL539_RS00720 85408078deee9604e1f17a805d33fca9 277 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 275 2.3E-133 T 29-03-2018 IPR009215 TIM-barrel domain, IGPS-like AL539_RS07215 85408078deee9604e1f17a805d33fca9 277 Gene3D G3DSA:3.20.20.70 5 253 1.4E-127 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS07215 85408078deee9604e1f17a805d33fca9 277 Gene3D G3DSA:1.20.5.460 254 275 6.3E-11 T 29-03-2018 AL539_RS07215 85408078deee9604e1f17a805d33fca9 277 SUPERFAMILY SSF51621 7 198 1.51E-84 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS07215 85408078deee9604e1f17a805d33fca9 277 PIRSF PIRSF034452 2 277 3.0E-158 T 29-03-2018 IPR009215 TIM-barrel domain, IGPS-like AL539_RS07215 85408078deee9604e1f17a805d33fca9 277 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 275 2.3E-133 T 29-03-2018 IPR009215 TIM-barrel domain, IGPS-like AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 Gene3D G3DSA:3.40.190.10 11 137 2.0E-35 T 29-03-2018 AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 SUPERFAMILY SSF53850 1 242 7.98E-68 T 29-03-2018 AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 SMART SM00062 22 243 1.6E-71 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 Gene3D G3DSA:3.40.190.10 138 243 3.0E-17 T 29-03-2018 AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 8.7E-64 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 SMART SM00079 22 243 0.005 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL539_RS25840 7db9dd3d6997af3cf0206831c354d865 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 8.6E-82 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AL539_RS06310 94574b3c91580288522230b16acec043 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.452 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL539_RS06310 94574b3c91580288522230b16acec043 226 Gene3D G3DSA:3.40.50.300 4 223 1.8E-50 T 29-03-2018 AL539_RS06310 94574b3c91580288522230b16acec043 226 SUPERFAMILY SSF52540 6 223 1.66E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06310 94574b3c91580288522230b16acec043 226 Pfam PF02224 Cytidylate kinase 8 221 6.6E-78 T 29-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL539_RS06310 94574b3c91580288522230b16acec043 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 7.1E-85 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL539_RS18890 157bfe46258fedb06002993b1f969b42 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 40.864 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL539_RS18890 157bfe46258fedb06002993b1f969b42 126 Pfam PF01597 Glycine cleavage H-protein 5 125 1.6E-49 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AL539_RS18890 157bfe46258fedb06002993b1f969b42 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 6.0E-51 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL539_RS18890 157bfe46258fedb06002993b1f969b42 126 Gene3D G3DSA:2.40.50.100 3 126 2.5E-47 T 29-03-2018 AL539_RS18890 157bfe46258fedb06002993b1f969b42 126 SUPERFAMILY SSF51230 3 125 5.63E-45 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS01840 a341f644a0a7004ea2b09b36055085db 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 2.2E-171 T 29-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AL539_RS01840 a341f644a0a7004ea2b09b36055085db 401 SUPERFAMILY SSF53383 21 388 9.9E-98 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS01840 a341f644a0a7004ea2b09b36055085db 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS01840 a341f644a0a7004ea2b09b36055085db 401 Gene3D G3DSA:3.40.640.10 4 256 2.8E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS01840 a341f644a0a7004ea2b09b36055085db 401 PIRSF PIRSF001434 1 391 3.5E-125 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS01840 a341f644a0a7004ea2b09b36055085db 401 Gene3D G3DSA:3.90.1150.10 257 391 1.5E-35 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS01840 a341f644a0a7004ea2b09b36055085db 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 5.1E-116 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS06355 bdb7fee6247a28acc104a3a0b4a6100f 383 Pfam PF01734 Patatin-like phospholipase 30 199 3.9E-20 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL539_RS06355 bdb7fee6247a28acc104a3a0b4a6100f 383 SUPERFAMILY SSF52151 25 306 1.75E-35 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS06355 bdb7fee6247a28acc104a3a0b4a6100f 383 Gene3D G3DSA:3.40.1090.10 21 324 2.3E-26 T 29-03-2018 AL539_RS04030 d68be37d29b4c33ceec15220fb3c5638 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL539_RS04030 d68be37d29b4c33ceec15220fb3c5638 90 Pfam PF00708 Acylphosphatase 7 89 1.0E-22 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL539_RS04030 d68be37d29b4c33ceec15220fb3c5638 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL539_RS04030 d68be37d29b4c33ceec15220fb3c5638 90 SUPERFAMILY SSF54975 4 89 3.49E-26 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL539_RS04030 d68be37d29b4c33ceec15220fb3c5638 90 Gene3D G3DSA:3.30.70.100 1 90 2.5E-26 T 29-03-2018 AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 SUPERFAMILY SSF53448 13 284 2.38E-70 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 SUPERFAMILY SSF53448 351 367 2.38E-70 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 Gene3D G3DSA:3.90.550.10 16 311 1.8E-57 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 Pfam PF00483 Nucleotidyl transferase 18 280 3.6E-62 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 414 47.582 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 Gene3D G3DSA:2.160.10.10 312 415 1.5E-5 T 29-03-2018 AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 387 1.5E-146 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 SUPERFAMILY SSF51161 300 412 1.88E-12 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS00865 26acb16a8e515b3a1ab5080b9c907330 418 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 106 114 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 AL539_RS06255 08310b409e0042698c3d562f5896917f 443 Pfam PF04403 Paraquat-inducible protein A 49 208 6.9E-39 T 29-03-2018 IPR007498 Paraquat-inducible protein A AL539_RS06255 08310b409e0042698c3d562f5896917f 443 Pfam PF04403 Paraquat-inducible protein A 265 422 5.6E-54 T 29-03-2018 IPR007498 Paraquat-inducible protein A AL539_RS06255 08310b409e0042698c3d562f5896917f 443 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 8 422 5.4E-104 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 Gene3D G3DSA:3.30.450.20 218 316 3.8E-7 T 29-03-2018 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 Gene3D G3DSA:1.10.287.130 412 511 4.2E-13 T 29-03-2018 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 SMART SM00388 448 515 2.3E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 SUPERFAMILY SSF55874 505 667 1.96E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 Gene3D G3DSA:3.30.565.10 517 671 9.9E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 SMART SM00387 558 669 1.3E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 667 1.9E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 Pfam PF00672 HAMP domain 349 395 1.6E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 SUPERFAMILY SSF103190 178 310 3.92E-13 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 Pfam PF17202 Single cache domain 3 204 318 3.0E-28 T 29-03-2018 IPR033463 Single cache domain 3 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 SUPERFAMILY SSF47384 442 512 9.81E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 513 3.2E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 1.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 1.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 1.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03525 4f3d5840e68183e6d66ccdedec2a9bfc 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 1.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19970 4392ec37ac6cc307cb66e848bc6251b1 343 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 328 5.4E-96 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AL539_RS19970 4392ec37ac6cc307cb66e848bc6251b1 343 Pfam PF06996 Type VI secretion, TssG 21 328 2.2E-84 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AL539_RS14605 b1f356f53c3efea317d5d5e8fc9557e5 305 SUPERFAMILY SSF54211 134 278 4.78E-53 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS14605 b1f356f53c3efea317d5d5e8fc9557e5 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.964 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS14605 b1f356f53c3efea317d5d5e8fc9557e5 305 Gene3D G3DSA:3.30.230.20 1 128 2.2E-50 T 29-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS14605 b1f356f53c3efea317d5d5e8fc9557e5 305 Gene3D G3DSA:3.30.1700.10 129 299 1.1E-68 T 29-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS14605 b1f356f53c3efea317d5d5e8fc9557e5 305 SUPERFAMILY SSF54211 3 126 1.21E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS14605 b1f356f53c3efea317d5d5e8fc9557e5 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.6E-109 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS14605 b1f356f53c3efea317d5d5e8fc9557e5 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 2.0E-142 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS21255 7a2e3ec90906a9b00cf8b91562402b56 555 SUPERFAMILY SSF53850 122 551 1.38E-47 T 29-03-2018 AL539_RS21255 7a2e3ec90906a9b00cf8b91562402b56 555 Gene3D G3DSA:3.40.190.10 240 352 5.0E-10 T 29-03-2018 AL539_RS21255 7a2e3ec90906a9b00cf8b91562402b56 555 Gene3D G3DSA:3.90.76.10 147 239 2.0E-18 T 29-03-2018 AL539_RS21255 7a2e3ec90906a9b00cf8b91562402b56 555 Pfam PF12793 Sugar transport-related sRNA regulator N-term 11 109 2.8E-17 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL539_RS21255 7a2e3ec90906a9b00cf8b91562402b56 555 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 310 9.7E-22 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS08060 4dede19cce8d96105d745650f56f19c5 367 Pfam PF06725 3D domain 272 348 5.2E-21 T 29-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AL539_RS08060 4dede19cce8d96105d745650f56f19c5 367 SMART SM00925 119 252 1.7E-65 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL539_RS08060 4dede19cce8d96105d745650f56f19c5 367 Gene3D G3DSA:2.40.240.50 50 253 6.5E-59 T 29-03-2018 AL539_RS08060 4dede19cce8d96105d745650f56f19c5 367 Pfam PF03562 MltA specific insert domain 71 251 1.5E-37 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL539_RS08060 4dede19cce8d96105d745650f56f19c5 367 SUPERFAMILY SSF50685 22 350 4.88E-101 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL539_RS07860 f7c95d07fb59eb6d3bfea361927bacf6 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.88 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS07860 f7c95d07fb59eb6d3bfea361927bacf6 41 Pfam PF00444 Ribosomal protein L36 1 40 4.6E-16 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS07860 f7c95d07fb59eb6d3bfea361927bacf6 41 SUPERFAMILY SSF57840 5 40 1.44E-13 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS07860 f7c95d07fb59eb6d3bfea361927bacf6 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 3.9E-7 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS07860 f7c95d07fb59eb6d3bfea361927bacf6 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS05565 6c92a3bf78a9bebc2799db2319fd93d8 346 Pfam PF05128 Domain of unknown function (DUF697) 181 338 1.8E-48 T 29-03-2018 IPR021147 Protein of unknown function DUF697 AL539_RS05565 6c92a3bf78a9bebc2799db2319fd93d8 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 33.534 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 AL539_RS05565 6c92a3bf78a9bebc2799db2319fd93d8 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 55 339 1.8E-73 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 SUPERFAMILY SSF54736 52 122 7.32E-24 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.394 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 Gene3D G3DSA:1.20.5.710 2 51 1.4E-14 T 29-03-2018 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 3.1E-29 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.7E-46 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 95 4.0E-14 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 SUPERFAMILY SSF48300 4 58 2.35E-15 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 5.8E-16 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11195 dfa6ee87245dcca836c2ec2666c84e44 122 Gene3D G3DSA:3.30.1390.10 52 122 4.7E-30 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL539_RS03045 8e36f24274e6b1ac961364894de88fb0 206 SUPERFAMILY SSF103088 48 150 7.72E-15 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS03045 8e36f24274e6b1ac961364894de88fb0 206 Pfam PF00691 OmpA family 77 159 9.9E-11 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS03045 8e36f24274e6b1ac961364894de88fb0 206 Gene3D G3DSA:3.30.1330.60 43 191 1.2E-14 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 Gene3D G3DSA:3.60.20.10 2 256 6.7E-56 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 Gene3D G3DSA:3.40.50.2020 274 443 1.1E-38 T 29-03-2018 AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 Pfam PF13522 Glutamine amidotransferase domain 63 206 2.2E-17 T 29-03-2018 AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 SUPERFAMILY SSF53271 249 482 2.23E-70 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 PIRSF PIRSF000485 1 479 7.7E-171 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 Pfam PF00156 Phosphoribosyl transferase domain 278 389 1.3E-7 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 SUPERFAMILY SSF56235 2 256 3.09E-71 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 3.7E-167 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL539_RS07030 22547384f9822263ec50d746a1c1d31a 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 45.241 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.7E-115 T 29-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 Gene3D G3DSA:3.40.50.720 2 245 5.3E-68 T 29-03-2018 AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 9.8E-4 T 29-03-2018 AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 2.4E-57 T 29-03-2018 AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 SUPERFAMILY SSF51735 2 245 7.04E-77 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20400 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.5E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 Pfam PF00571 CBS domain 278 325 2.7E-5 T 29-03-2018 IPR000644 CBS domain AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 Pfam PF03471 Transporter associated domain 344 418 1.4E-16 T 29-03-2018 IPR005170 Transporter-associated domain AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 SUPERFAMILY SSF54631 192 329 3.92E-24 T 29-03-2018 AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 SUPERFAMILY SSF56176 340 423 1.23E-20 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 SMART SM01091 342 420 9.5E-23 T 29-03-2018 IPR005170 Transporter-associated domain AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 Gene3D G3DSA:3.30.465.10 338 426 1.1E-16 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 Gene3D G3DSA:3.10.580.10 185 337 6.1E-23 T 29-03-2018 AL539_RS08800 a07bb4ef10bba6bfabc8b5712669fee7 426 Pfam PF01595 Domain of unknown function DUF21 13 181 9.8E-50 T 29-03-2018 IPR002550 Domain of unknown function DUF21 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.7E-36 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 Gene3D G3DSA:3.30.460.10 207 340 3.1E-42 T 29-03-2018 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 SUPERFAMILY SSF109604 53 205 9.73E-42 T 29-03-2018 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 SUPERFAMILY SSF81271 395 461 7.41E-21 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 SUPERFAMILY SSF55021 662 737 2.96E-9 T 29-03-2018 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 SMART SM00954 250 360 8.3E-64 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 5.5E-183 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 Pfam PF13291 ACT domain 661 737 3.4E-15 T 29-03-2018 IPR002912 ACT domain AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 Pfam PF13328 HD domain 50 190 7.0E-35 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 Gene3D G3DSA:3.30.70.260 660 739 2.2E-7 T 29-03-2018 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 Gene3D G3DSA:3.10.20.30 396 471 7.7E-23 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 SUPERFAMILY SSF81301 195 406 2.45E-61 T 29-03-2018 AL539_RS08990 119638c638101b10ade6bc2ed530a1c9 739 Pfam PF02824 TGS domain 402 461 1.6E-20 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 4.2E-299 T 29-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Gene3D G3DSA:2.40.240.10 344 464 1.9E-48 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.1E-126 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Gene3D G3DSA:3.40.50.620 8 41 0.0084 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 SUPERFAMILY SSF50715 340 548 3.4E-80 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Gene3D G3DSA:2.40.240.10 465 548 6.9E-34 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Gene3D G3DSA:3.40.50.620 42 152 5.0E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Gene3D G3DSA:3.40.50.620 153 260 8.4E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.281 T 29-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Gene3D G3DSA:1.10.1160.10 261 338 2.1E-36 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 3.4E-63 T 29-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16715 cbabe76d6dbb378d79e429013d9a1a79 556 SUPERFAMILY SSF52374 11 337 2.28E-102 T 29-03-2018 AL539_RS03635 385eaac6b01c35b1ec98f0a3be7d3b89 293 Pfam PF15575 Immunity protein 49 73 277 1.8E-42 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 Pfam PF00072 Response regulator receiver domain 7 116 2.8E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 SMART SM00448 5 115 2.9E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 2.7E-12 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 Gene3D G3DSA:1.10.10.10 137 232 1.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 SUPERFAMILY SSF46894 154 231 1.62E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 SMART SM00862 156 231 7.3E-10 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 SUPERFAMILY SSF52172 4 127 1.57E-34 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS23555 b9830b1c5308c1d602b9e32db54020dd 236 Gene3D G3DSA:3.40.50.2300 2 131 5.0E-29 T 29-03-2018 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 6.2E-31 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 29-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 2.0E-15 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 Gene3D G3DSA:3.30.360.10 164 308 3.3E-51 T 29-03-2018 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.257 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 7.5E-119 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 SUPERFAMILY SSF51735 1 173 1.19E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 SUPERFAMILY SSF55347 154 308 1.83E-50 T 29-03-2018 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 Gene3D G3DSA:3.40.50.720 1 163 1.4E-34 T 29-03-2018 AL539_RS10350 ddd7f5d096f4079778f45b19d033b368 334 SMART SM00859 3 146 9.4E-45 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL539_RS19160 27075df8259a2242c3599c4157620051 326 Gene3D G3DSA:2.30.30.40 109 154 9.2E-12 T 29-03-2018 AL539_RS19160 27075df8259a2242c3599c4157620051 326 Gene3D G3DSA:3.40.50.2300 186 322 5.2E-28 T 29-03-2018 AL539_RS19160 27075df8259a2242c3599c4157620051 326 Pfam PF01584 CheW-like domain 37 162 1.1E-29 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS19160 27075df8259a2242c3599c4157620051 326 Pfam PF00072 Response regulator receiver domain 195 316 1.3E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19160 27075df8259a2242c3599c4157620051 326 SUPERFAMILY SSF52172 193 320 1.99E-28 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS19160 27075df8259a2242c3599c4157620051 326 SMART SM00260 14 160 2.7E-26 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS19160 27075df8259a2242c3599c4157620051 326 Gene3D G3DSA:2.40.50.180 44 108 4.1E-16 T 29-03-2018 AL539_RS19160 27075df8259a2242c3599c4157620051 326 PIRSF PIRSF002867 1 324 5.5E-103 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV AL539_RS19160 27075df8259a2242c3599c4157620051 326 SUPERFAMILY SSF50341 7 165 1.12E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS19160 27075df8259a2242c3599c4157620051 326 SMART SM00448 193 318 6.9E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS04685 09cdb81894c51551dd5849ccbdb3bd83 287 Gene3D G3DSA:2.40.50.100 40 112 7.9E-16 T 29-03-2018 AL539_RS04685 09cdb81894c51551dd5849ccbdb3bd83 287 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 228 1.2E-15 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS04685 09cdb81894c51551dd5849ccbdb3bd83 287 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 227 4.8E-33 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS04685 09cdb81894c51551dd5849ccbdb3bd83 287 SUPERFAMILY SSF111369 38 237 5.62E-27 T 29-03-2018 AL539_RS04685 09cdb81894c51551dd5849ccbdb3bd83 287 Gene3D G3DSA:2.40.50.100 142 278 8.4E-6 T 29-03-2018 AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 39 5.5E-9 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 Gene3D G3DSA:3.40.50.2300 164 296 3.8E-39 T 29-03-2018 AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 Gene3D G3DSA:3.40.50.2300 46 163 2.4E-22 T 29-03-2018 AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 SUPERFAMILY SSF53822 53 317 1.59E-52 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 SUPERFAMILY SSF47413 2 50 1.03E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 Pfam PF13377 Periplasmic binding protein-like domain 157 317 1.4E-31 T 29-03-2018 AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 SMART SM00354 1 62 3.5E-9 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS23135 e9015578fb5407d013c07f1facbb65de 318 Gene3D G3DSA:1.10.260.40 1 45 3.4E-15 T 29-03-2018 AL539_RS14425 2f0b4d40456f0e8454825fbbf017f4d5 194 SUPERFAMILY SSF53474 5 192 6.57E-19 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS14425 2f0b4d40456f0e8454825fbbf017f4d5 194 Gene3D G3DSA:3.40.50.1820 5 193 1.9E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS14425 2f0b4d40456f0e8454825fbbf017f4d5 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 1.1E-69 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 Gene3D G3DSA:3.30.450.20 164 287 1.0E-6 T 29-03-2018 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 Gene3D G3DSA:1.10.287.130 360 436 2.8E-11 T 29-03-2018 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 SUPERFAMILY SSF55874 442 595 4.19E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 SUPERFAMILY SSF103190 48 187 1.1E-30 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 SMART SM00387 483 593 6.5E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 SMART SM00388 372 440 8.3E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 Gene3D G3DSA:3.30.450.20 54 163 3.8E-21 T 29-03-2018 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 Gene3D G3DSA:3.30.565.10 439 594 1.6E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 591 2.0E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 8.2E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 8.2E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 8.2E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 PIRSF PIRSF036431 1 599 2.1E-188 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 440 1.1E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS17115 a220e22ad56b0f9fde5cd0f5af4ebbe7 601 SUPERFAMILY SSF47384 367 440 2.35E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 Gene3D G3DSA:3.40.190.10 177 263 1.5E-23 T 29-03-2018 AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 Gene3D G3DSA:1.10.10.10 3 84 2.5E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 Pfam PF03466 LysR substrate binding domain 88 292 7.4E-50 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.0E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 SUPERFAMILY SSF46785 6 88 4.52E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 SUPERFAMILY SSF53850 89 294 4.19E-51 T 29-03-2018 AL539_RS21690 c11c0b420c3f49f1a2187e454efc0208 307 Gene3D G3DSA:3.40.190.10 86 176 1.5E-20 T 29-03-2018 AL539_RS12860 9bde279ddbbd41cf3bca3d738f74f571 305 Pfam PF13673 Acetyltransferase (GNAT) domain 48 144 1.2E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS12860 9bde279ddbbd41cf3bca3d738f74f571 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 4.4E-46 T 29-03-2018 IPR012660 Thioesterase, putative AL539_RS12860 9bde279ddbbd41cf3bca3d738f74f571 305 Gene3D G3DSA:3.10.129.10 145 299 3.4E-18 T 29-03-2018 AL539_RS12860 9bde279ddbbd41cf3bca3d738f74f571 305 Gene3D G3DSA:3.40.630.30 1 144 5.8E-24 T 29-03-2018 AL539_RS12860 9bde279ddbbd41cf3bca3d738f74f571 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.6E-53 T 29-03-2018 IPR012660 Thioesterase, putative AL539_RS12860 9bde279ddbbd41cf3bca3d738f74f571 305 SUPERFAMILY SSF54637 154 296 3.17E-41 T 29-03-2018 IPR029069 HotDog domain AL539_RS12860 9bde279ddbbd41cf3bca3d738f74f571 305 SUPERFAMILY SSF55729 2 159 7.27E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Pfam PF02589 LUD domain 71 295 1.2E-51 T 29-03-2018 IPR003741 LUD domain AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Gene3D G3DSA:3.30.70.20 321 370 6.7E-9 T 29-03-2018 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 SUPERFAMILY SSF100950 135 296 8.79E-39 T 29-03-2018 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 SUPERFAMILY SSF100950 64 89 8.79E-39 T 29-03-2018 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Gene3D G3DSA:3.30.70.20 371 411 0.22 T 29-03-2018 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Gene3D G3DSA:3.30.70.20 296 320 0.069 T 29-03-2018 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 SUPERFAMILY SSF46548 278 393 2.62E-18 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Pfam PF11870 Domain of unknown function (DUF3390) 392 469 4.1E-10 T 29-03-2018 IPR024569 4Fe-4S binding protein, C-terminal AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 19 454 3.2E-195 T 29-03-2018 IPR004452 4Fe-4S binding protein GO:0019516 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 363 374 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Pfam PF13183 4Fe-4S dicluster domain 310 377 2.4E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Gene3D G3DSA:3.40.50.10420 138 295 9.1E-47 T 29-03-2018 AL539_RS00220 b48d5faa80c16cb7ef487650046fb778 471 Gene3D G3DSA:3.40.50.10420 64 137 1.4E-6 T 29-03-2018 AL539_RS08535 c7d6d4520ff10316c45d9ce92a284203 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 3.9E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS08535 c7d6d4520ff10316c45d9ce92a284203 328 Gene3D G3DSA:1.10.3720.10 2 313 3.6E-30 T 29-03-2018 AL539_RS08535 c7d6d4520ff10316c45d9ce92a284203 328 SUPERFAMILY SSF161098 93 307 8.28E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS00630 6ec5611e0fd02ab233caf29e565142ff 183 Pfam PF07603 Protein of unknown function (DUF1566) 46 176 1.4E-29 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 29-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 Pfam PF00814 Glycoprotease family 24 307 2.6E-102 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 Gene3D G3DSA:3.30.420.40 1 145 9.7E-40 T 29-03-2018 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 SUPERFAMILY SSF53067 101 309 5.61E-43 T 29-03-2018 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.4E-133 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.999 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.1E-50 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.1E-50 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.1E-50 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.1E-50 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.1E-50 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.1E-50 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 Gene3D G3DSA:3.30.420.40 146 288 4.4E-18 T 29-03-2018 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 2.6E-122 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS14315 3d931d106cd69fe98fe1495b19b297f9 338 SUPERFAMILY SSF53067 3 123 6.47E-31 T 29-03-2018 AL539_RS03010 87a3804d5acbe9e9a3e229419a535a41 332 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 268 4.1E-24 T 29-03-2018 AL539_RS03010 87a3804d5acbe9e9a3e229419a535a41 332 Gene3D G3DSA:3.40.50.1000 60 328 3.6E-13 T 29-03-2018 IPR023214 HAD-like domain AL539_RS03010 87a3804d5acbe9e9a3e229419a535a41 332 SUPERFAMILY SSF56784 62 308 5.43E-25 T 29-03-2018 IPR023214 HAD-like domain AL539_RS17275 38a79f33d88b8a87b4c0d639184c5e00 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 340 1.2E-87 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS17275 38a79f33d88b8a87b4c0d639184c5e00 364 SUPERFAMILY SSF111369 49 264 2.09E-37 T 29-03-2018 AL539_RS17275 38a79f33d88b8a87b4c0d639184c5e00 364 Gene3D G3DSA:1.10.287.470 106 149 4.0E-10 T 29-03-2018 AL539_RS17275 38a79f33d88b8a87b4c0d639184c5e00 364 Gene3D G3DSA:2.40.50.100 150 352 1.5E-7 T 29-03-2018 AL539_RS17275 38a79f33d88b8a87b4c0d639184c5e00 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 259 9.3E-29 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS17275 38a79f33d88b8a87b4c0d639184c5e00 364 Gene3D G3DSA:3.90.1170.30 30 105 1.3E-4 T 29-03-2018 AL539_RS14620 0e8ca0a950988c4969c1a83b2ec73c26 132 SUPERFAMILY SSF55811 1 127 3.25E-35 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS14620 0e8ca0a950988c4969c1a83b2ec73c26 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 2.2E-9 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS14620 0e8ca0a950988c4969c1a83b2ec73c26 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 2.2E-9 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS14620 0e8ca0a950988c4969c1a83b2ec73c26 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS14620 0e8ca0a950988c4969c1a83b2ec73c26 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 6.7E-43 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AL539_RS14620 0e8ca0a950988c4969c1a83b2ec73c26 132 Pfam PF00293 NUDIX domain 7 124 1.7E-20 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS14620 0e8ca0a950988c4969c1a83b2ec73c26 132 Gene3D G3DSA:3.90.79.10 1 130 7.1E-30 T 29-03-2018 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 SUPERFAMILY SSF53041 3 146 7.06E-36 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 Gene3D G3DSA:3.40.50.1390 1 115 8.6E-28 T 29-03-2018 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 Gene3D G3DSA:1.20.5.40 116 144 2.7E-16 T 29-03-2018 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 Gene3D G3DSA:1.10.10.60 146 190 6.3E-10 T 29-03-2018 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 Pfam PF00239 Resolvase, N terminal domain 5 145 9.4E-36 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 ProSitePatterns PS00398 Site-specific recombinases signature 2. 64 76 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 SMART SM00857 4 146 6.6E-45 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS15645 50c3bcd3cd603f102b1435fe70316d37 196 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.2E-50 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 SMART SM01134 72 234 2.9E-67 T 29-03-2018 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 SUPERFAMILY SSF46785 5 77 4.83E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 SMART SM00420 6 58 1.2E-27 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.6E-24 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 Gene3D G3DSA:3.40.50.1360 72 240 3.1E-38 T 29-03-2018 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 Gene3D G3DSA:1.10.10.10 2 58 5.2E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 SUPERFAMILY SSF100950 74 234 7.78E-29 T 29-03-2018 AL539_RS08170 236a48e4b31ef023e77fe4de63bd3814 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 SUPERFAMILY SSF51971 145 399 1.06E-69 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 Gene3D G3DSA:1.10.1060.10 2 146 1.3E-41 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 Gene3D G3DSA:3.50.50.60 400 470 2.4E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 6.2E-252 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.0E-39 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.0E-36 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.0E-36 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.0E-36 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.0E-36 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.0E-36 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 SUPERFAMILY SSF46548 6 157 1.2E-40 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 Gene3D G3DSA:3.50.50.60 313 399 1.2E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 Gene3D G3DSA:3.50.50.60 241 312 4.6E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 Gene3D G3DSA:3.40.50.720 147 240 6.3E-16 T 29-03-2018 AL539_RS14685 0e9a07e30563e520dd149a03d643443e 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 2.8E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS22470 9a4812bc854f0c0d365064e00749a0f0 272 Gene3D G3DSA:1.25.40.10 6 269 0.0017 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 9.4E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:3.10.20.30 29 136 2.0E-19 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF54292 35 124 2.42E-21 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:2.40.30.10 137 256 4.8E-32 T 29-03-2018 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 5.1E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 5.1E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 5.1E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 5.1E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 5.1E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 3.9E-228 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 3.1E-16 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 42 115 2.4E-10 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF52343 258 402 4.32E-35 T 29-03-2018 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:3.40.50.80 257 401 1.3E-27 T 29-03-2018 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.814 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 PIRSF PIRSF000044 1 407 8.3E-219 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL539_RS07945 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF63380 105 272 6.81E-36 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS06775 37a87b847eb05ead5fd8ad6fb0562f32 111 Gene3D G3DSA:3.40.30.10 1 111 4.5E-30 T 29-03-2018 AL539_RS06775 37a87b847eb05ead5fd8ad6fb0562f32 111 PIRSF PIRSF005894 1 107 1.1E-51 T 29-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AL539_RS06775 37a87b847eb05ead5fd8ad6fb0562f32 111 SUPERFAMILY SSF52833 1 104 3.67E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS06775 37a87b847eb05ead5fd8ad6fb0562f32 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.7E-46 T 29-03-2018 IPR004480 Monothiol glutaredoxin-related AL539_RS06775 37a87b847eb05ead5fd8ad6fb0562f32 111 Pfam PF00462 Glutaredoxin 16 80 4.4E-17 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL539_RS17530 059c5c1c85591adfe91d89438c6d5736 256 Gene3D G3DSA:3.40.50.300 2 255 2.4E-69 T 29-03-2018 AL539_RS17530 059c5c1c85591adfe91d89438c6d5736 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS17530 059c5c1c85591adfe91d89438c6d5736 256 SUPERFAMILY SSF52540 7 251 1.86E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17530 059c5c1c85591adfe91d89438c6d5736 256 SMART SM00382 31 229 1.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17530 059c5c1c85591adfe91d89438c6d5736 256 Pfam PF00005 ABC transporter 22 181 5.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS17530 059c5c1c85591adfe91d89438c6d5736 256 PIRSF PIRSF039085 3 256 1.5E-116 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 Pfam PF07731 Multicopper oxidase 363 459 2.8E-26 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 SUPERFAMILY SSF49503 32 155 8.2E-39 T 29-03-2018 IPR008972 Cupredoxin AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 29-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 SUPERFAMILY SSF49503 158 277 1.26E-16 T 29-03-2018 IPR008972 Cupredoxin AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 Gene3D G3DSA:2.60.40.420 160 287 3.6E-20 T 29-03-2018 IPR008972 Cupredoxin AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 Gene3D G3DSA:2.60.40.420 12 154 3.4E-35 T 29-03-2018 IPR008972 Cupredoxin AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 26 5.4E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 Pfam PF00394 Multicopper oxidase 199 281 7.2E-9 T 29-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 SUPERFAMILY SSF49503 310 459 7.49E-34 T 29-03-2018 IPR008972 Cupredoxin AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 Gene3D G3DSA:2.60.40.420 291 460 8.1E-33 T 29-03-2018 IPR008972 Cupredoxin AL539_RS11825 0bd24a5d1cfafdea31efbcbb18352e60 460 Pfam PF07732 Multicopper oxidase 45 156 1.9E-36 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AL539_RS18650 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 SMART SM00782 6 52 2.4E-28 T 29-03-2018 IPR013991 PhnA protein N-terminal, proteobacterial AL539_RS18650 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 Gene3D G3DSA:2.30.30.40 118 184 3.1E-22 T 29-03-2018 AL539_RS18650 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 SUPERFAMILY SSF82057 117 184 3.85E-20 T 29-03-2018 AL539_RS18650 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 Pfam PF03831 PhnA domain 119 184 2.6E-22 T 29-03-2018 IPR013988 PhnA protein, C-terminal AL539_RS18650 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 2.9E-10 T 29-03-2018 IPR013987 PhnA protein, N-terminal AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 SUPERFAMILY SSF55120 66 227 2.79E-37 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 SUPERFAMILY SSF55174 7 97 2.35E-14 T 29-03-2018 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 Pfam PF00849 RNA pseudouridylate synthase 67 193 1.4E-13 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 Gene3D G3DSA:3.30.70.580 63 145 1.7E-15 T 29-03-2018 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 Pfam PF01479 S4 domain 8 52 5.3E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 Gene3D G3DSA:3.10.290.10 4 62 2.8E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 1.5E-47 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 SMART SM00363 7 65 1.7E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS16330 680eccd2934a3e75e38ce2f7f38f5e1b 385 Gene3D G3DSA:3.30.70.1560 146 210 7.0E-26 T 29-03-2018 AL539_RS10650 01391a1b45ec0206ef67ae34c1136525 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL539_RS10650 01391a1b45ec0206ef67ae34c1136525 87 Gene3D G3DSA:2.30.30.100 4 73 3.5E-34 T 29-03-2018 AL539_RS10650 01391a1b45ec0206ef67ae34c1136525 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 29-03-2018 IPR010920 LSM domain AL539_RS10650 01391a1b45ec0206ef67ae34c1136525 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL539_RS10650 01391a1b45ec0206ef67ae34c1136525 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL539_RS09985 25b9e705c9d7b880ffa5e8dbd63d6dd6 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS09985 25b9e705c9d7b880ffa5e8dbd63d6dd6 250 Gene3D G3DSA:3.30.2350.10 14 220 1.5E-57 T 29-03-2018 AL539_RS09985 25b9e705c9d7b880ffa5e8dbd63d6dd6 250 SUPERFAMILY SSF55120 7 220 9.28E-60 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS09985 25b9e705c9d7b880ffa5e8dbd63d6dd6 250 Pfam PF00849 RNA pseudouridylate synthase 23 172 1.5E-29 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS18915 8e5fd33c6fbe41337f6ed252e6d4f02a 301 Gene3D G3DSA:1.10.10.10 1 86 4.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18915 8e5fd33c6fbe41337f6ed252e6d4f02a 301 Pfam PF03466 LysR substrate binding domain 90 292 4.5E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS18915 8e5fd33c6fbe41337f6ed252e6d4f02a 301 Gene3D G3DSA:3.40.190.10 180 265 5.0E-19 T 29-03-2018 AL539_RS18915 8e5fd33c6fbe41337f6ed252e6d4f02a 301 SUPERFAMILY SSF46785 5 87 2.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18915 8e5fd33c6fbe41337f6ed252e6d4f02a 301 Gene3D G3DSA:3.40.190.10 91 179 1.5E-11 T 29-03-2018 AL539_RS18915 8e5fd33c6fbe41337f6ed252e6d4f02a 301 SUPERFAMILY SSF53850 90 296 3.98E-38 T 29-03-2018 AL539_RS18915 8e5fd33c6fbe41337f6ed252e6d4f02a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.4E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15545 93e7679cc86e7ed08ebab961f137cc49 468 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 454 1.7E-46 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15545 93e7679cc86e7ed08ebab961f137cc49 468 Gene3D G3DSA:3.30.70.270 279 459 1.5E-52 T 29-03-2018 AL539_RS15545 93e7679cc86e7ed08ebab961f137cc49 468 SUPERFAMILY SSF55073 300 457 3.37E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS15545 93e7679cc86e7ed08ebab961f137cc49 468 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 456 5.8E-50 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15545 93e7679cc86e7ed08ebab961f137cc49 468 SMART SM00267 284 458 1.6E-55 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Pfam PF03473 MOSC domain 138 262 2.9E-30 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 SUPERFAMILY SSF50800 148 264 2.88E-14 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 SUPERFAMILY SSF50800 5 52 2.88E-14 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 491 4.0E-18 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Gene3D G3DSA:2.40.33.20 2 276 1.3E-50 T 29-03-2018 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Gene3D G3DSA:3.10.20.30 509 605 4.3E-20 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 SUPERFAMILY SSF63380 275 380 7.88E-26 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 6.4E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 6.4E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 6.4E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 6.4E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 6.4E-8 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Gene3D G3DSA:2.40.30.10 279 378 1.1E-21 T 29-03-2018 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 SUPERFAMILY SSF54292 501 604 1.57E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 SUPERFAMILY SSF141673 6 133 1.83E-29 T 29-03-2018 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 532 597 8.3E-13 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Gene3D G3DSA:3.40.50.80 379 508 3.0E-32 T 29-03-2018 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 118 1.2E-29 T 29-03-2018 IPR005303 MOSC, N-terminal beta barrel AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 SUPERFAMILY SSF52343 368 508 8.64E-37 T 29-03-2018 AL539_RS24475 7933ed51adea8c4b5a0a3f015843eac8 605 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 1.5E-14 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL539_RS01575 54a580fbd822fd74bc5bee16d09216fe 197 Gene3D G3DSA:3.50.70.10 29 178 1.2E-12 T 29-03-2018 IPR016088 Chalcone isomerase, 3-layer sandwich GO:0009813|GO:0045430 AL539_RS01575 54a580fbd822fd74bc5bee16d09216fe 197 Pfam PF16036 Chalcone isomerase-like 68 194 2.0E-6 T 29-03-2018 IPR016087 Chalcone isomerase GO:0016872 AL539_RS10365 f97c4e981acab5299588029f45c66d97 179 Pfam PF10400 Virulence activator alpha C-term 92 176 6.6E-15 T 29-03-2018 IPR018309 Transcription regulator PadR, C-terminal AL539_RS10365 f97c4e981acab5299588029f45c66d97 179 SUPERFAMILY SSF46785 3 176 3.18E-44 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10365 f97c4e981acab5299588029f45c66d97 179 Gene3D G3DSA:1.10.10.10 1 92 5.4E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10365 f97c4e981acab5299588029f45c66d97 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 29-03-2018 IPR005149 Transcription regulator PadR, N-terminal AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Gene3D G3DSA:3.30.300.20 384 466 8.6E-27 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 SMART SM00382 208 355 0.22 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 SMART SM00382 1 139 3.4 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 5.9E-178 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 5.1E-26 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 9.2E-22 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Gene3D G3DSA:3.40.50.300 256 383 1.3E-23 T 29-03-2018 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 SUPERFAMILY SSF52540 4 164 2.62E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Gene3D G3DSA:1.20.120.430 67 255 1.9E-40 T 29-03-2018 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.215 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 3.0E-25 T 29-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 PIRSF PIRSF006485 1 473 7.6E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.4E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.0E-26 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 Gene3D G3DSA:1.20.120.430 2 66 4.6E-14 T 29-03-2018 AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 SUPERFAMILY SSF52540 207 471 1.88E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15375 8cb9450017ee9b36ef6cb0c1c768da67 498 SUPERFAMILY SSF52540 139 170 1.88E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12490 61f15b00df9ceea3b508ca5c04fe6dba 517 Gene3D G3DSA:3.10.105.10 281 488 3.7E-50 T 29-03-2018 AL539_RS12490 61f15b00df9ceea3b508ca5c04fe6dba 517 Gene3D G3DSA:3.90.76.10 33 176 1.3E-32 T 29-03-2018 AL539_RS12490 61f15b00df9ceea3b508ca5c04fe6dba 517 PIRSF PIRSF002741 21 512 4.6E-92 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS12490 61f15b00df9ceea3b508ca5c04fe6dba 517 SUPERFAMILY SSF53850 26 516 3.26E-128 T 29-03-2018 AL539_RS12490 61f15b00df9ceea3b508ca5c04fe6dba 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 1.4E-83 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS12490 61f15b00df9ceea3b508ca5c04fe6dba 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL539_RS12490 61f15b00df9ceea3b508ca5c04fe6dba 517 Gene3D G3DSA:3.40.190.10 179 280 8.4E-24 T 29-03-2018 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 SUPERFAMILY SSF51419 8 234 6.8E-72 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 TIGRFAM TIGR00492 alr: alanine racemase 4 356 1.9E-130 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 SMART SM01005 233 357 3.0E-67 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 SUPERFAMILY SSF50621 226 356 4.53E-47 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 3.2E-42 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 Gene3D G3DSA:2.40.37.10 202 358 1.4E-61 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 Hamap MF_01201 Alanine racemase. 1 357 35.113 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.1E-71 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 120 132 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 249 264 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 266 281 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 339 352 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 192 219 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 287 304 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 60 78 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 26 42 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 PRINTS PR00992 Alanine racemase signature 155 166 1.3E-71 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS10225 4336407d14a8135c9217c32063916ce4 358 Gene3D G3DSA:3.20.20.10 10 201 1.3E-43 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 Gene3D G3DSA:3.40.640.10 213 336 1.9E-27 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 SUPERFAMILY SSF53383 57 450 2.34E-106 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 PIRSF PIRSF000521 8 158 6.9E-6 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 PIRSF PIRSF000521 151 452 1.8E-19 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 Gene3D G3DSA:3.90.1150.10 337 453 9.7E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 Pfam PF00202 Aminotransferase class-III 57 449 1.0E-85 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS21600 640ada6fd32c779df4d7b88632ac8173 459 Gene3D G3DSA:3.90.1150.10 19 194 3.0E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:3.30.70.260 293 388 1.4E-26 T 29-03-2018 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 Pfam PF01817 Chorismate mutase type II 12 91 2.5E-16 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:1.20.59.10 2 116 6.1E-26 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 7.8E-27 T 29-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 Pfam PF00800 Prephenate dehydratase 110 291 1.7E-60 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:3.40.190.10 202 278 2.4E-24 T 29-03-2018 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 SMART SM00830 12 93 1.5E-21 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:3.40.190.10 117 201 1.6E-30 T 29-03-2018 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 SUPERFAMILY SSF53850 109 295 4.02E-56 T 29-03-2018 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 PIRSF PIRSF001500 1 384 6.0E-142 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 SUPERFAMILY SSF48600 7 95 6.96E-19 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS15050 2bcf9490cbb0a6b59a098c796d4c2c31 392 SUPERFAMILY SSF55021 284 381 1.77E-25 T 29-03-2018 AL539_RS12740 7fcbbb65ca9e4fbd2875718f36bb18c0 253 SUPERFAMILY SSF51556 1 253 1.87E-81 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS12740 7fcbbb65ca9e4fbd2875718f36bb18c0 253 Pfam PF01026 TatD related DNase 2 252 2.1E-65 T 29-03-2018 IPR001130 TatD family GO:0016788 AL539_RS12740 7fcbbb65ca9e4fbd2875718f36bb18c0 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.7E-71 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL539_RS12740 7fcbbb65ca9e4fbd2875718f36bb18c0 253 PIRSF PIRSF005902 1 253 4.1E-72 T 29-03-2018 IPR001130 TatD family GO:0016788 AL539_RS12740 7fcbbb65ca9e4fbd2875718f36bb18c0 253 Gene3D G3DSA:3.20.20.140 1 253 6.7E-72 T 29-03-2018 AL539_RS20760 e2048ce7c240a8de048f213e039a66c3 338 Gene3D G3DSA:3.20.20.140 1 337 1.8E-80 T 29-03-2018 AL539_RS20760 e2048ce7c240a8de048f213e039a66c3 338 SUPERFAMILY SSF51556 4 323 9.36E-89 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS20760 e2048ce7c240a8de048f213e039a66c3 338 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 324 6.2E-114 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AL539_RS20760 e2048ce7c240a8de048f213e039a66c3 338 Hamap MF_01962 Adenine deaminase. 4 316 85.293 T 29-03-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AL539_RS20760 e2048ce7c240a8de048f213e039a66c3 338 Pfam PF00962 Adenosine/AMP deaminase 8 323 3.6E-74 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AL539_RS10885 b81d25a378af9988ab5057c4fbd46be7 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 1.6E-67 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL539_RS10885 b81d25a378af9988ab5057c4fbd46be7 302 Pfam PF01545 Cation efflux family 15 206 1.8E-42 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL539_RS10885 b81d25a378af9988ab5057c4fbd46be7 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 4.4E-26 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AL539_RS10885 b81d25a378af9988ab5057c4fbd46be7 302 SUPERFAMILY SSF160240 210 287 2.62E-24 T 29-03-2018 AL539_RS10885 b81d25a378af9988ab5057c4fbd46be7 302 Gene3D G3DSA:3.30.70.1350 207 290 4.5E-23 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AL539_RS10885 b81d25a378af9988ab5057c4fbd46be7 302 Gene3D G3DSA:1.20.1510.10 8 206 7.0E-40 T 29-03-2018 AL539_RS10885 b81d25a378af9988ab5057c4fbd46be7 302 SUPERFAMILY SSF161111 8 207 5.23E-50 T 29-03-2018 AL539_RS11160 2a92c242d01bfcb793aca9829c39192f 307 Gene3D G3DSA:3.40.50.720 8 104 1.4E-12 T 29-03-2018 AL539_RS11160 2a92c242d01bfcb793aca9829c39192f 307 SUPERFAMILY SSF52283 16 120 1.47E-6 T 29-03-2018 AL539_RS11160 2a92c242d01bfcb793aca9829c39192f 307 SUPERFAMILY SSF51735 93 273 2.74E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS11160 2a92c242d01bfcb793aca9829c39192f 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 7.6E-48 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL539_RS11160 2a92c242d01bfcb793aca9829c39192f 307 Gene3D G3DSA:3.40.50.720 105 273 2.2E-43 T 29-03-2018 AL539_RS14775 8113755e23acdc884c82fc5c6d373b8f 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_RS14775 8113755e23acdc884c82fc5c6d373b8f 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.663 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL539_RS14775 8113755e23acdc884c82fc5c6d373b8f 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.1E-68 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL539_RS14775 8113755e23acdc884c82fc5c6d373b8f 125 PIRSF PIRSF000378 2 125 6.7E-54 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL539_RS14775 8113755e23acdc884c82fc5c6d373b8f 125 Gene3D G3DSA:3.20.70.20 7 125 7.6E-30 T 29-03-2018 AL539_RS14775 8113755e23acdc884c82fc5c6d373b8f 125 SUPERFAMILY SSF51998 64 124 9.61E-24 T 29-03-2018 AL539_RS14775 8113755e23acdc884c82fc5c6d373b8f 125 Pfam PF01228 Glycine radical 16 106 3.8E-23 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 Pfam PF04055 Radical SAM superfamily 19 181 4.5E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 SUPERFAMILY SSF102114 6 288 1.19E-70 T 29-03-2018 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 Gene3D G3DSA:3.20.20.70 1 329 1.2E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 3.5E-105 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.845 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 4.2E-39 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.5E-8 T 29-03-2018 AL539_RS06660 9fb448805e85cf4d73b6ff78c6ba1f55 329 SMART SM00729 14 219 2.9E-5 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 Gene3D G3DSA:2.40.30.10 331 435 1.5E-17 T 29-03-2018 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.676 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.2E-12 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 Gene3D G3DSA:2.40.30.10 238 327 5.6E-22 T 29-03-2018 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 SUPERFAMILY SSF52540 19 235 3.06E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 SUPERFAMILY SSF50447 243 324 2.43E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 2.3E-197 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 1.7E-44 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 Gene3D G3DSA:3.40.50.300 4 237 2.7E-40 T 29-03-2018 AL539_RS13705 b32b8db441a720f22c45c147844cea56 476 SUPERFAMILY SSF50465 332 434 8.15E-30 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL539_RS17670 47616c858c5e5866460a168e10a801de 228 Pfam PF09335 SNARE associated Golgi protein 65 181 2.0E-23 T 29-03-2018 IPR032816 SNARE associated Golgi protein AL539_RS08285 69dd3d5a269b3755eee41824e9e32ff4 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08285 69dd3d5a269b3755eee41824e9e32ff4 239 Pfam PF01048 Phosphorylase superfamily 15 217 6.1E-41 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS08285 69dd3d5a269b3755eee41824e9e32ff4 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.732 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL539_RS08285 69dd3d5a269b3755eee41824e9e32ff4 239 SUPERFAMILY SSF53167 3 234 7.59E-93 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS08285 69dd3d5a269b3755eee41824e9e32ff4 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 3.5E-119 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL539_RS08285 69dd3d5a269b3755eee41824e9e32ff4 239 Gene3D G3DSA:3.40.50.1580 9 235 3.0E-54 T 29-03-2018 AL539_RS21225 152b2897d97588e4c0489af646084297 96 SUPERFAMILY SSF88659 37 80 2.4E-6 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS21225 152b2897d97588e4c0489af646084297 96 Pfam PF02001 Protein of unknown function DUF134 2 89 6.7E-21 T 29-03-2018 IPR002852 Uncharacterised protein family UPF0251 AL539_RS21225 152b2897d97588e4c0489af646084297 96 Gene3D G3DSA:1.10.10.10 6 84 2.6E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21225 152b2897d97588e4c0489af646084297 96 Hamap MF_00674 UPF0251 protein . 2 95 24.209 T 29-03-2018 IPR002852 Uncharacterised protein family UPF0251 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 SUPERFAMILY SSF52540 37 82 8.71E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 SUPERFAMILY SSF52540 460 583 8.71E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Gene3D G3DSA:3.40.50.300 416 590 1.1E-31 T 29-03-2018 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 129 1.2E-8 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.1E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Gene3D G3DSA:3.40.50.300 11 415 1.3E-32 T 29-03-2018 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 SMART SM00490 461 547 1.2E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Gene3D G3DSA:4.10.860.10 616 676 1.6E-17 T 29-03-2018 IPR001943 UVR domain GO:0005515 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 1.1E-20 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.899 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 SUPERFAMILY SSF46600 625 672 2.75E-10 T 29-03-2018 IPR001943 UVR domain GO:0005515 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.9E-8 T 29-03-2018 IPR001943 UVR domain GO:0005515 AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 SMART SM00487 9 427 2.2E-27 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS06680 e166145b1d8b175e4e52d7aab06e6b13 676 SUPERFAMILY SSF52540 5 416 7.43E-137 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19360 86918b616bb2be4626ca82ce7dcacca3 717 Pfam PF13515 Fusaric acid resistance protein-like 405 523 1.2E-22 T 29-03-2018 AL539_RS19360 86918b616bb2be4626ca82ce7dcacca3 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.0E-241 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK AL539_RS19360 86918b616bb2be4626ca82ce7dcacca3 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 3.2E-113 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AL539_RS19360 86918b616bb2be4626ca82ce7dcacca3 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 29-03-2018 IPR010019 Integral membrane protein, YccS AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:1.20.1600.10 145 443 8.0E-22 T 29-03-2018 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 1.4E-134 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 29-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 Pfam PF13437 HlyD family secretion protein 316 426 4.5E-18 T 29-03-2018 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 SUPERFAMILY SSF56954 171 261 3.79E-5 T 29-03-2018 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 Pfam PF13533 Biotin-lipoyl like 75 108 1.8E-6 T 29-03-2018 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 3.2E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 3.2E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 3.2E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 3.2E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 3.2E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 3.2E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 3.2E-48 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:2.40.50.100 47 103 1.2E-4 T 29-03-2018 AL539_RS22770 a98f9c47e956046c10383652648e2f4f 463 SUPERFAMILY SSF111369 64 130 8.11E-6 T 29-03-2018 AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 29-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.8E-67 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 8.7E-52 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 8.7E-52 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 8.7E-52 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 8.7E-52 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 241 18.381 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL539_RS12725 2f2392ed1fe5164ac4fe1c6d23814ee9 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 3.8E-77 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL539_RS03410 80a48367c9914a7eb82b566173c06687 456 PIRSF PIRSF006603 5 452 3.1E-63 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS03410 80a48367c9914a7eb82b566173c06687 456 Pfam PF01554 MatE 243 404 5.6E-39 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS03410 80a48367c9914a7eb82b566173c06687 456 Pfam PF01554 MatE 17 176 9.8E-37 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS03410 80a48367c9914a7eb82b566173c06687 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 5.9E-124 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS19330 b2b485430ba70c2d8b296ba02074b0d9 771 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 89 770 3.6E-299 T 29-03-2018 IPR010706 Fatty acid cis-trans isomerase AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 Gene3D G3DSA:3.40.470.10 1 223 8.9E-107 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 1.0E-26 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 4.6E-88 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.23 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 SMART SM00987 49 210 5.2E-41 T 29-03-2018 AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 29-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 SUPERFAMILY SSF52141 4 222 6.71E-97 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS14790 b56f3d8fefb01022566863ee41266a49 226 SMART SM00986 49 210 5.2E-41 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS22340 0bf38ed9b8412d4552186430a5dc1b84 290 Pfam PF03466 LysR substrate binding domain 88 288 2.1E-47 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS22340 0bf38ed9b8412d4552186430a5dc1b84 290 Gene3D G3DSA:1.10.10.10 3 84 2.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22340 0bf38ed9b8412d4552186430a5dc1b84 290 Gene3D G3DSA:3.40.190.10 177 259 7.3E-25 T 29-03-2018 AL539_RS22340 0bf38ed9b8412d4552186430a5dc1b84 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.3E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22340 0bf38ed9b8412d4552186430a5dc1b84 290 Gene3D G3DSA:3.40.190.10 86 176 1.6E-18 T 29-03-2018 AL539_RS22340 0bf38ed9b8412d4552186430a5dc1b84 290 SUPERFAMILY SSF46785 4 87 4.09E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22340 0bf38ed9b8412d4552186430a5dc1b84 290 SUPERFAMILY SSF53850 89 289 5.79E-48 T 29-03-2018 AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 SUPERFAMILY SSF52540 243 396 1.25E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 SUPERFAMILY SSF52540 466 550 1.25E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 SUPERFAMILY SSF52540 310 359 5.31E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 SUPERFAMILY SSF52540 711 791 5.31E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 Gene3D G3DSA:3.40.50.300 229 536 1.9E-17 T 29-03-2018 AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 Gene3D G3DSA:3.40.50.300 579 795 5.2E-6 T 29-03-2018 AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 SMART SM00487 275 550 5.1E-10 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 Pfam PF11867 Domain of unknown function (DUF3387) 838 1062 3.2E-10 T 29-03-2018 IPR021810 Protein of unknown function DUF3387 AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 16 209 5.1E-23 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AL539_RS15655 3c1be91048d7b7000c6a27541a22d448 1123 Pfam PF04851 Type III restriction enzyme, res subunit 279 512 2.8E-15 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 1.7E-27 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 Gene3D G3DSA:3.30.230.40 257 357 5.9E-32 T 29-03-2018 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 Gene3D G3DSA:3.40.50.1000 2 167 9.2E-24 T 29-03-2018 IPR023214 HAD-like domain AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 Gene3D G3DSA:3.30.230.40 169 255 4.2E-34 T 29-03-2018 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.8E-66 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 3.5E-5 T 29-03-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.791 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.9E-47 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 5.8E-79 T 29-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 SUPERFAMILY SSF56784 3 158 5.38E-39 T 29-03-2018 IPR023214 HAD-like domain AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.042 T 29-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AL539_RS01635 252cc393c03c2f37cfde087d7be5c2a4 357 SUPERFAMILY SSF54211 169 253 2.02E-32 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS14655 b148e7116ec3eb0e543102ce7a80a88d 284 Gene3D G3DSA:3.40.190.10 86 234 4.4E-6 T 29-03-2018 AL539_RS14655 b148e7116ec3eb0e543102ce7a80a88d 284 SUPERFAMILY SSF53850 90 280 1.45E-16 T 29-03-2018 AL539_RS14655 b148e7116ec3eb0e543102ce7a80a88d 284 Pfam PF03466 LysR substrate binding domain 91 276 4.8E-13 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS14655 b148e7116ec3eb0e543102ce7a80a88d 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.7E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS14655 b148e7116ec3eb0e543102ce7a80a88d 284 SUPERFAMILY SSF46785 4 84 6.13E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14655 b148e7116ec3eb0e543102ce7a80a88d 284 Gene3D G3DSA:1.10.10.10 1 79 5.4E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08110 a67605533ce3b6a02780b439a3228db2 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 2.1E-50 T 29-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AL539_RS08110 a67605533ce3b6a02780b439a3228db2 607 PIRSF PIRSF004950 1 606 6.6E-234 T 29-03-2018 IPR012159 Inner membrane protein YejM AL539_RS08110 a67605533ce3b6a02780b439a3228db2 607 Pfam PF00884 Sulfatase 250 521 3.9E-33 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS08110 a67605533ce3b6a02780b439a3228db2 607 SUPERFAMILY SSF53649 247 571 4.53E-60 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS08110 a67605533ce3b6a02780b439a3228db2 607 Gene3D G3DSA:3.40.720.10 249 554 1.8E-40 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 SUPERFAMILY SSF52540 565 604 7.59E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 SUPERFAMILY SSF52540 634 713 7.59E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 SUPERFAMILY SSF52540 421 509 7.59E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 SMART SM00487 289 510 6.1E-5 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 Pfam PF11867 Domain of unknown function (DUF3387) 730 1070 1.3E-113 T 29-03-2018 IPR021810 Protein of unknown function DUF3387 AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 SUPERFAMILY SSF52540 230 530 5.78E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 4 732 1.6E-194 T 29-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 Pfam PF04851 Type III restriction enzyme, res subunit 290 477 6.7E-15 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 212 1.4E-45 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AL539_RS25305 d7b822d8d4c9f58b65da2adc4ec03795 1074 Gene3D G3DSA:3.40.50.300 32 500 2.9E-22 T 29-03-2018 AL539_RS19790 b70f2d07fe4f3031c8cf615899a7a4fb 414 SUPERFAMILY SSF53822 25 392 9.76E-54 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS19790 b70f2d07fe4f3031c8cf615899a7a4fb 414 Pfam PF13458 Periplasmic binding protein 27 389 5.1E-67 T 29-03-2018 IPR028081 Leucine-binding protein domain AL539_RS19790 b70f2d07fe4f3031c8cf615899a7a4fb 414 Gene3D G3DSA:3.40.50.2300 20 257 3.6E-28 T 29-03-2018 AL539_RS16475 a5f645f069b9ef46ebe70975f7f20875 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS16475 a5f645f069b9ef46ebe70975f7f20875 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.7E-34 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS16475 a5f645f069b9ef46ebe70975f7f20875 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 7.8E-23 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS16475 a5f645f069b9ef46ebe70975f7f20875 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 1.9E-53 T 29-03-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AL539_RS16475 a5f645f069b9ef46ebe70975f7f20875 249 SUPERFAMILY SSF117143 77 207 1.15E-16 T 29-03-2018 AL539_RS13395 86b7518cb2f77543efb2660e68b58e40 449 SUPERFAMILY SSF56281 6 444 3.54E-123 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS13395 86b7518cb2f77543efb2660e68b58e40 449 Pfam PF00753 Metallo-beta-lactamase superfamily 28 112 1.1E-11 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS13395 86b7518cb2f77543efb2660e68b58e40 449 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 449 4.7E-14 T 29-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AL539_RS13395 86b7518cb2f77543efb2660e68b58e40 449 SMART SM01027 244 374 4.0E-58 T 29-03-2018 IPR022712 Beta-Casp domain AL539_RS13395 86b7518cb2f77543efb2660e68b58e40 449 SMART SM00849 21 226 5.4E-19 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS13395 86b7518cb2f77543efb2660e68b58e40 449 Pfam PF10996 Beta-Casp domain 244 374 6.4E-30 T 29-03-2018 IPR022712 Beta-Casp domain AL539_RS13395 86b7518cb2f77543efb2660e68b58e40 449 Gene3D G3DSA:3.60.15.10 8 263 5.6E-51 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS22765 8e88427507944f086cc110857f17c73b 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 168 1.3E-12 T 29-03-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 Gene3D G3DSA:3.30.450.20 97 210 3.5E-15 T 29-03-2018 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 SUPERFAMILY SSF47384 192 271 2.16E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 SUPERFAMILY SSF55785 86 196 1.92E-11 T 29-03-2018 IPR000014 PAS domain AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF00989 PAS fold 99 165 1.0E-7 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.8E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.5E-31 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 SMART SM00388 205 272 8.9E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 1.0E-5 T 29-03-2018 IPR000014 PAS domain AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 3.6E-139 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 Gene3D G3DSA:3.30.565.10 256 427 2.7E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 428 9.6E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 Gene3D G3DSA:1.10.287.130 211 255 1.7E-15 T 29-03-2018 AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 SMART SM00091 98 166 7.2E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 SMART SM00387 317 429 2.6E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS15170 99a752cdf26c37d1509da47deb5b377b 432 SUPERFAMILY SSF55874 261 426 1.7E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS13700 573e0961cd99316dde1a879b6c444a96 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.0E-163 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL539_RS13700 573e0961cd99316dde1a879b6c444a96 302 Gene3D G3DSA:3.40.50.620 2 300 9.6E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS13700 573e0961cd99316dde1a879b6c444a96 302 SUPERFAMILY SSF52402 6 209 5.82E-74 T 29-03-2018 AL539_RS13700 573e0961cd99316dde1a879b6c444a96 302 PIRSF PIRSF002936 1 302 8.4E-156 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL539_RS13700 573e0961cd99316dde1a879b6c444a96 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.3E-63 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL539_RS13700 573e0961cd99316dde1a879b6c444a96 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.224 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 Pfam PF03466 LysR substrate binding domain 88 294 3.9E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 Gene3D G3DSA:3.40.190.10 88 176 9.9E-13 T 29-03-2018 AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 Gene3D G3DSA:1.10.10.10 3 87 1.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 SUPERFAMILY SSF46785 4 112 3.19E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 Gene3D G3DSA:3.40.190.10 177 265 3.5E-22 T 29-03-2018 AL539_RS23460 fbfad0bea7074558fc7e77964efc2d99 307 SUPERFAMILY SSF53850 89 296 3.8E-39 T 29-03-2018 AL539_RS19175 e68ac3e4a1ab51c0c2594e0f022a47ec 295 SUPERFAMILY SSF46785 4 81 5.89E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19175 e68ac3e4a1ab51c0c2594e0f022a47ec 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19175 e68ac3e4a1ab51c0c2594e0f022a47ec 295 SUPERFAMILY SSF53850 96 293 9.59E-10 T 29-03-2018 AL539_RS19175 e68ac3e4a1ab51c0c2594e0f022a47ec 295 Gene3D G3DSA:1.10.10.10 1 84 2.6E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 2.6E-37 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Gene3D G3DSA:3.40.120.10 166 271 1.2E-27 T 29-03-2018 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Gene3D G3DSA:3.40.120.10 1 165 5.7E-43 T 29-03-2018 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Gene3D G3DSA:3.30.310.50 383 469 1.3E-16 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Gene3D G3DSA:3.40.120.10 272 382 8.4E-32 T 29-03-2018 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 SUPERFAMILY SSF55957 374 466 7.85E-17 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 1.0E-8 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 5.3E-26 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 SUPERFAMILY SSF53738 250 379 2.47E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 SUPERFAMILY SSF53738 2 187 2.75E-40 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS08575 50baf8aab7915e022532e1c048c2d7f8 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 5.4E-25 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 Pfam PF07687 Peptidase dimerisation domain 183 273 8.6E-15 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS02565 794e293082a64e604799c0f1c741318f 368 Gene3D G3DSA:3.30.70.360 183 272 2.1E-23 T 29-03-2018 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 PIRSF PIRSF001123 103 190 0.0045 T 29-03-2018 IPR008007 Peptidase M42 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 PIRSF PIRSF001123 6 105 0.27 T 29-03-2018 IPR008007 Peptidase M42 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 PIRSF PIRSF001123 283 368 5.4E-4 T 29-03-2018 IPR008007 Peptidase M42 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 Gene3D G3DSA:3.40.630.10 273 368 5.6E-6 T 29-03-2018 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 Pfam PF01546 Peptidase family M20/M25/M40 73 366 1.9E-18 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 SUPERFAMILY SSF55031 178 289 3.4E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS02565 794e293082a64e604799c0f1c741318f 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 2.8E-155 T 29-03-2018 IPR010162 Peptidase M20B, peptidase T-like AL539_RS02565 794e293082a64e604799c0f1c741318f 368 Gene3D G3DSA:3.40.630.10 1 182 1.3E-30 T 29-03-2018 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 SUPERFAMILY SSF53187 7 177 1.39E-59 T 29-03-2018 AL539_RS02565 794e293082a64e604799c0f1c741318f 368 SUPERFAMILY SSF53187 287 366 1.39E-59 T 29-03-2018 AL539_RS02405 d4984b254e9cb245959dfb187f27b470 598 Pfam PF01432 Peptidase family M3 339 579 1.3E-22 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL539_RS02405 d4984b254e9cb245959dfb187f27b470 598 SUPERFAMILY SSF55486 4 576 4.98E-97 T 29-03-2018 AL539_RS02405 d4984b254e9cb245959dfb187f27b470 598 Pfam PF08439 Oligopeptidase F 107 174 5.8E-11 T 29-03-2018 IPR013647 Oligopeptidase F, N-terminal domain AL539_RS02405 d4984b254e9cb245959dfb187f27b470 598 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.8E-201 T 29-03-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 AL539_RS22830 b583368c573c112ba25365f0efde1000 177 Pfam PF13302 Acetyltransferase (GNAT) domain 11 147 5.9E-24 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS22830 b583368c573c112ba25365f0efde1000 177 SUPERFAMILY SSF55729 2 171 2.86E-34 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS22830 b583368c573c112ba25365f0efde1000 177 Gene3D G3DSA:3.40.630.30 2 176 4.3E-18 T 29-03-2018 AL539_RS13140 4718de524dfd4f146897b5f936b42710 399 Pfam PF02441 Flavoprotein 7 179 6.5E-43 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL539_RS13140 4718de524dfd4f146897b5f936b42710 399 Gene3D G3DSA:3.40.50.1950 1 184 8.1E-55 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL539_RS13140 4718de524dfd4f146897b5f936b42710 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 3.5E-77 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL539_RS13140 4718de524dfd4f146897b5f936b42710 399 SUPERFAMILY SSF52507 1 182 1.31E-60 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL539_RS13140 4718de524dfd4f146897b5f936b42710 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 9.6E-153 T 29-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AL539_RS13140 4718de524dfd4f146897b5f936b42710 399 SUPERFAMILY SSF102645 184 398 2.49E-80 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL539_RS13140 4718de524dfd4f146897b5f936b42710 399 Gene3D G3DSA:3.40.50.10300 185 399 2.9E-70 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 SUPERFAMILY SSF53807 32 284 2.98E-46 T 29-03-2018 AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 Gene3D G3DSA:3.40.50.1980 143 290 5.5E-19 T 29-03-2018 AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 Gene3D G3DSA:3.40.50.1980 31 142 3.5E-22 T 29-03-2018 AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 Pfam PF01497 Periplasmic binding protein 36 252 3.4E-21 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 52 70 1.0E-19 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 181 196 1.0E-19 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 83 98 1.0E-19 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 269 282 1.0E-19 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS03175 4ae07b5549dd215aae356374ccb7d60b 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 205 223 1.0E-19 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS04205 5f0efc00b4f40899c9e553d1f1f551a5 324 SUPERFAMILY SSF56935 22 324 1.13E-52 T 29-03-2018 AL539_RS04205 5f0efc00b4f40899c9e553d1f1f551a5 324 Pfam PF13609 Gram-negative porin 11 311 6.3E-26 T 29-03-2018 AL539_RS04205 5f0efc00b4f40899c9e553d1f1f551a5 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 310 324 4.3E-8 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AL539_RS04205 5f0efc00b4f40899c9e553d1f1f551a5 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 4.3E-8 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AL539_RS04205 5f0efc00b4f40899c9e553d1f1f551a5 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 4.3E-8 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AL539_RS04205 5f0efc00b4f40899c9e553d1f1f551a5 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.3E-8 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AL539_RS04205 5f0efc00b4f40899c9e553d1f1f551a5 324 Gene3D G3DSA:2.40.160.10 8 324 3.7E-43 T 29-03-2018 AL539_RS13270 92dbf4371410fd0a88390c8f3da2d896 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 8.4E-75 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS13270 92dbf4371410fd0a88390c8f3da2d896 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 7.6E-107 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AL539_RS13270 92dbf4371410fd0a88390c8f3da2d896 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.168 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AL539_RS13270 92dbf4371410fd0a88390c8f3da2d896 329 PIRSF PIRSF026649 12 313 6.0E-80 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS26000 bf0255db5236979d2cd2063a278dee3e 144 Gene3D G3DSA:3.40.630.30 1 72 5.3E-12 T 29-03-2018 AL539_RS26000 bf0255db5236979d2cd2063a278dee3e 144 Pfam PF00583 Acetyltransferase (GNAT) family 22 121 2.2E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS26000 bf0255db5236979d2cd2063a278dee3e 144 Gene3D G3DSA:3.40.630.30 73 138 5.2E-13 T 29-03-2018 AL539_RS26000 bf0255db5236979d2cd2063a278dee3e 144 SUPERFAMILY SSF55729 2 140 5.57E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS20385 d9e0b30b14cac3b7c6da50d36e8e48bd 591 SUPERFAMILY SSF53474 225 526 6.17E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS20385 d9e0b30b14cac3b7c6da50d36e8e48bd 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 3.3E-250 T 29-03-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 AL539_RS20385 d9e0b30b14cac3b7c6da50d36e8e48bd 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 3.9E-74 T 29-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AL539_RS20385 d9e0b30b14cac3b7c6da50d36e8e48bd 591 Gene3D G3DSA:3.40.50.1820 227 556 5.6E-19 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 Gene3D G3DSA:1.10.10.10 129 237 2.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 SMART SM00448 8 118 8.0E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 1.1E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 SMART SM00862 154 230 2.2E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 SUPERFAMILY SSF46894 136 232 1.19E-23 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 SUPERFAMILY SSF52172 8 129 1.85E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 Gene3D G3DSA:3.40.50.2300 1 128 1.4E-32 T 29-03-2018 AL539_RS20695 6ac1c537975b441795d580af1b72eb78 237 Pfam PF00072 Response regulator receiver domain 11 119 9.0E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS04190 f9cdfe52a48776702d4a0e5d61d7e050 315 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 112 206 9.4E-28 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS04190 f9cdfe52a48776702d4a0e5d61d7e050 315 SUPERFAMILY SSF161098 111 300 1.7E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04190 f9cdfe52a48776702d4a0e5d61d7e050 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 311 1.7E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04190 f9cdfe52a48776702d4a0e5d61d7e050 315 Gene3D G3DSA:1.10.3720.10 5 315 2.0E-51 T 29-03-2018 AL539_RS23825 516883e894bee8bcf7f8e1f00b32b777 171 SUPERFAMILY SSF49329 25 171 6.28E-50 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL539_RS23825 516883e894bee8bcf7f8e1f00b32b777 171 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 159 170 - T 29-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL539_RS23825 516883e894bee8bcf7f8e1f00b32b777 171 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 63 73 - T 29-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL539_RS23825 516883e894bee8bcf7f8e1f00b32b777 171 Gene3D G3DSA:2.60.40.200 22 171 7.7E-40 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL539_RS23825 516883e894bee8bcf7f8e1f00b32b777 171 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 170 1.6E-31 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 Gene3D G3DSA:3.30.1490.70 145 188 1.0E-5 T 29-03-2018 AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 Pfam PF01068 ATP dependent DNA ligase domain 46 199 9.1E-7 T 29-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 176 199 - T 29-03-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 Gene3D G3DSA:3.30.470.30 52 144 1.5E-16 T 29-03-2018 AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 SUPERFAMILY SSF50249 174 278 8.0E-30 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 SUPERFAMILY SSF56091 25 199 1.99E-40 T 29-03-2018 AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 Pfam PF14743 DNA ligase OB-like domain 213 278 3.7E-26 T 29-03-2018 IPR029319 DNA ligase, OB-like domain AL539_RS03400 9e0385e0504b4f68e6b08441ca372539 281 Gene3D G3DSA:2.40.50.140 189 281 4.6E-20 T 29-03-2018 AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 Pfam PF00005 ABC transporter 378 531 4.8E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 SUPERFAMILY SSF52540 351 601 1.61E-89 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 Gene3D G3DSA:3.40.50.300 346 605 2.1E-76 T 29-03-2018 AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 SMART SM00382 386 577 1.4E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 Pfam PF00664 ABC transporter transmembrane region 40 308 3.5E-16 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 SUPERFAMILY SSF90123 507 516 4.32E-47 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 SUPERFAMILY SSF90123 19 325 4.32E-47 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 Gene3D G3DSA:1.20.1560.10 6 345 3.5E-32 T 29-03-2018 AL539_RS24200 bd930e7389c71391a2f816786aa5797e 617 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS09250 10244f90ee7eac5a1538e558103d99af 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.2E-126 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AL539_RS09250 10244f90ee7eac5a1538e558103d99af 368 Gene3D G3DSA:3.40.50.300 271 345 8.6E-13 T 29-03-2018 AL539_RS09250 10244f90ee7eac5a1538e558103d99af 368 Gene3D G3DSA:3.40.50.300 111 270 5.4E-27 T 29-03-2018 AL539_RS09250 10244f90ee7eac5a1538e558103d99af 368 Pfam PF00437 Type II/IV secretion system protein 116 268 3.2E-36 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL539_RS09250 10244f90ee7eac5a1538e558103d99af 368 SUPERFAMILY SSF52540 3 334 4.71E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09250 10244f90ee7eac5a1538e558103d99af 368 Gene3D G3DSA:3.30.450.90 1 97 9.3E-18 T 29-03-2018 AL539_RS14830 4d8300e7a71581fdf96eb5a5799b33bf 172 SUPERFAMILY SSF52218 1 167 5.03E-49 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS14830 4d8300e7a71581fdf96eb5a5799b33bf 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL539_RS14830 4d8300e7a71581fdf96eb5a5799b33bf 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.9E-68 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL539_RS14830 4d8300e7a71581fdf96eb5a5799b33bf 172 Pfam PF00258 Flavodoxin 5 160 1.3E-27 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL539_RS14830 4d8300e7a71581fdf96eb5a5799b33bf 172 PIRSF PIRSF038996 1 171 9.4E-60 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL539_RS14830 4d8300e7a71581fdf96eb5a5799b33bf 172 Gene3D G3DSA:3.40.50.360 74 172 4.3E-20 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS14830 4d8300e7a71581fdf96eb5a5799b33bf 172 Gene3D G3DSA:3.40.50.360 1 73 4.3E-13 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 SUPERFAMILY SSF51984 9 97 3.4E-15 T 29-03-2018 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 356 2.3E-7 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 SUPERFAMILY SSF53244 299 435 7.32E-44 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 434 1.2E-133 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 SUPERFAMILY SSF53623 98 297 2.75E-55 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 Pfam PF08245 Mur ligase middle domain 113 279 1.2E-30 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 Gene3D G3DSA:3.40.50.720 9 97 2.7E-11 T 29-03-2018 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 Gene3D G3DSA:3.90.190.20 300 433 8.7E-33 T 29-03-2018 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 Gene3D G3DSA:3.40.1190.10 98 299 4.1E-58 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14570 00b9c59c9eefff4392b8abe4b77c29b4 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.337 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS07505 57546937a36f562594a4e873116869b1 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.874 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL539_RS07505 57546937a36f562594a4e873116869b1 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 9.6E-178 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL539_RS07505 57546937a36f562594a4e873116869b1 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL539_RS07505 57546937a36f562594a4e873116869b1 378 SUPERFAMILY SSF55031 181 291 3.44E-28 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS07505 57546937a36f562594a4e873116869b1 378 Pfam PF07687 Peptidase dimerisation domain 177 284 3.4E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS07505 57546937a36f562594a4e873116869b1 378 Gene3D G3DSA:3.40.630.10 271 376 6.5E-11 T 29-03-2018 AL539_RS07505 57546937a36f562594a4e873116869b1 378 SUPERFAMILY SSF53187 6 180 8.2E-67 T 29-03-2018 AL539_RS07505 57546937a36f562594a4e873116869b1 378 SUPERFAMILY SSF53187 294 376 8.2E-67 T 29-03-2018 AL539_RS07505 57546937a36f562594a4e873116869b1 378 Gene3D G3DSA:3.40.630.10 2 270 1.7E-62 T 29-03-2018 AL539_RS07505 57546937a36f562594a4e873116869b1 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 3.7E-46 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 Pfam PF13307 Helicase C-terminal domain 526 684 5.4E-37 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 Gene3D G3DSA:3.40.50.300 23 471 5.2E-20 T 29-03-2018 AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 SMART SM00491 535 671 9.7E-28 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 Gene3D G3DSA:3.40.50.300 502 688 3.9E-10 T 29-03-2018 AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 SUPERFAMILY SSF52540 14 123 1.98E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 SUPERFAMILY SSF52540 207 263 1.98E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 SUPERFAMILY SSF52540 630 666 1.98E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 SUPERFAMILY SSF52540 507 610 1.9E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 SUPERFAMILY SSF52540 243 265 1.9E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 SUPERFAMILY SSF52540 641 666 1.9E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17575 603597eb5d827c223cb20284b4482d49 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 3.6E-5 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS15475 5a5cceec459c7f60059faa0d15c61a74 379 Gene3D G3DSA:3.40.50.1820 10 286 4.9E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS15475 5a5cceec459c7f60059faa0d15c61a74 379 Pfam PF01764 Lipase (class 3) 76 205 3.6E-20 T 29-03-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AL539_RS15475 5a5cceec459c7f60059faa0d15c61a74 379 SUPERFAMILY SSF53474 73 227 2.9E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS10380 9f410e988e097d92df4f614d4a300138 386 Gene3D G3DSA:3.40.640.10 2 248 9.1E-52 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS10380 9f410e988e097d92df4f614d4a300138 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 4.8E-200 T 29-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AL539_RS10380 9f410e988e097d92df4f614d4a300138 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 4.8E-135 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS10380 9f410e988e097d92df4f614d4a300138 386 PIRSF PIRSF001434 1 385 6.5E-130 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS10380 9f410e988e097d92df4f614d4a300138 386 Gene3D G3DSA:3.90.1150.10 251 386 9.4E-51 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS10380 9f410e988e097d92df4f614d4a300138 386 SUPERFAMILY SSF53383 9 383 1.02E-114 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS10380 9f410e988e097d92df4f614d4a300138 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 PIRSF PIRSF004862 24 576 1.5E-126 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 Gene3D G3DSA:3.30.70.1530 73 136 3.9E-7 T 29-03-2018 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 Pfam PF08345 Flagellar M-ring protein C-terminal 277 433 2.7E-38 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 PRINTS PR01009 Flagellar M-ring protein signature 290 308 7.1E-27 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 PRINTS PR01009 Flagellar M-ring protein signature 363 387 7.1E-27 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 PRINTS PR01009 Flagellar M-ring protein signature 143 161 7.1E-27 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 PRINTS PR01009 Flagellar M-ring protein signature 175 189 7.1E-27 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 PRINTS PR01009 Flagellar M-ring protein signature 219 237 7.1E-27 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 Pfam PF01514 Secretory protein of YscJ/FliF family 52 243 7.6E-64 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF AL539_RS23725 cb653a70a162eb86cd1589ab0076193f 583 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 41 574 5.0E-73 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL539_RS03775 46911110e451a273570422384e712d08 226 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 214 4.4E-55 T 29-03-2018 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 7.0E-174 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 SUPERFAMILY SSF52210 239 385 4.58E-54 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.175 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 Gene3D G3DSA:3.30.470.20 96 239 2.7E-53 T 29-03-2018 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 Gene3D G3DSA:3.40.50.261 240 385 5.3E-42 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 PIRSF PIRSF001554 1 388 4.7E-154 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 Pfam PF00549 CoA-ligase 262 382 9.4E-25 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 Gene3D G3DSA:3.30.1490.20 21 95 4.4E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 Pfam PF08442 ATP-grasp domain 2 203 3.7E-79 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS16800 700bac088960f0a0cfe1b293ecbae96c 388 SUPERFAMILY SSF56059 1 238 5.13E-79 T 29-03-2018 AL539_RS17175 0fa526c4b061698eea77c2ca72ee8328 194 SUPERFAMILY SSF109604 4 185 8.57E-45 T 29-03-2018 AL539_RS17175 0fa526c4b061698eea77c2ca72ee8328 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.75 T 29-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AL539_RS17175 0fa526c4b061698eea77c2ca72ee8328 194 Gene3D G3DSA:1.10.3210.10 1 194 1.3E-52 T 29-03-2018 AL539_RS17175 0fa526c4b061698eea77c2ca72ee8328 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 3.0E-46 T 29-03-2018 AL539_RS17175 0fa526c4b061698eea77c2ca72ee8328 194 SMART SM00471 26 151 2.1E-8 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS17175 0fa526c4b061698eea77c2ca72ee8328 194 Pfam PF13023 HD domain 11 158 5.1E-17 T 29-03-2018 IPR006674 HD domain AL539_RS04730 3926f836e030ecc9da40032d74977502 117 SUPERFAMILY SSF54909 1 116 1.88E-50 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS04730 3926f836e030ecc9da40032d74977502 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 1.1E-43 T 29-03-2018 IPR009874 Protein of unknown function DUF1428 AL539_RS04730 3926f836e030ecc9da40032d74977502 117 PIRSF PIRSF007028 1 117 9.6E-47 T 29-03-2018 IPR009874 Protein of unknown function DUF1428 AL539_RS04730 3926f836e030ecc9da40032d74977502 117 Gene3D G3DSA:3.30.70.100 1 117 9.6E-57 T 29-03-2018 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 Gene3D G3DSA:4.10.80.40 541 588 7.6E-14 T 29-03-2018 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 SUPERFAMILY SSF51905 359 443 2.65E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 SUPERFAMILY SSF51905 5 259 2.65E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 Gene3D G3DSA:3.50.50.60 317 420 8.2E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.3E-274 T 29-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 SUPERFAMILY SSF46977 452 588 2.75E-45 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 PIRSF PIRSF000171 1 580 2.9E-49 T 29-03-2018 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 Gene3D G3DSA:3.50.50.60 4 295 1.9E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 Gene3D G3DSA:1.20.58.100 431 540 2.0E-33 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 Pfam PF00890 FAD binding domain 9 405 4.6E-118 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.0E-239 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16780 11ab1f1f5c0ed27661922c046ae928c3 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.2E-35 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 SUPERFAMILY SSF103088 198 314 5.76E-31 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 Gene3D G3DSA:3.30.1330.60 192 326 9.5E-34 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 Pfam PF00691 OmpA family 216 308 4.0E-18 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 Pfam PF01389 OmpA-like transmembrane domain 23 180 8.1E-22 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 Gene3D G3DSA:2.40.160.20 5 191 4.5E-31 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 PRINTS PR01021 OMPA domain signature 259 275 5.3E-6 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 PRINTS PR01021 OMPA domain signature 244 259 5.3E-6 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS21540 a6df0a0647a3b02af4d996a52005ded9 326 SUPERFAMILY SSF56925 23 181 5.49E-34 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 SUPERFAMILY SSF47823 16 107 4.51E-12 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 SUPERFAMILY SSF56349 116 302 2.53E-52 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 2.3E-108 T 29-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 Gene3D G3DSA:1.10.443.10 122 298 3.0E-43 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 5.2E-20 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 Pfam PF00589 Phage integrase family 122 290 2.8E-48 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.803 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AL539_RS11570 f2a4e95e1a41aeca02c9267d973fcebd 310 Gene3D G3DSA:1.10.150.130 9 121 3.8E-20 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:3.40.190.10 200 283 8.7E-12 T 29-03-2018 AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:3.40.190.10 114 199 2.7E-12 T 29-03-2018 AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:1.10.10.10 19 101 8.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 Pfam PF03466 LysR substrate binding domain 121 306 8.9E-23 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS14035 f946a028829f73c831ede0fa871a1d3c 319 SUPERFAMILY SSF53850 106 308 3.44E-39 T 29-03-2018 AL539_RS15025 0bd809b042d6f6e6f57e414a5d682686 119 Gene3D G3DSA:2.40.10.220 1 118 6.4E-20 T 29-03-2018 AL539_RS15025 0bd809b042d6f6e6f57e414a5d682686 119 Pfam PF07238 PilZ domain 3 100 3.8E-14 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AL539_RS15025 0bd809b042d6f6e6f57e414a5d682686 119 PIRSF PIRSF028141 1 118 2.9E-36 T 29-03-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type AL539_RS15025 0bd809b042d6f6e6f57e414a5d682686 119 SUPERFAMILY SSF141371 1 117 3.34E-29 T 29-03-2018 AL539_RS04790 d6eaea27dcfe2352618c2fd526c72d19 173 Gene3D G3DSA:3.40.630.30 8 159 9.2E-15 T 29-03-2018 AL539_RS04790 d6eaea27dcfe2352618c2fd526c72d19 173 SUPERFAMILY SSF55729 9 132 8.95E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS04790 d6eaea27dcfe2352618c2fd526c72d19 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 124 2.0E-10 T 29-03-2018 AL539_RS07315 7541a46720e73791cdb2916bd7e5a093 122 Gene3D G3DSA:3.40.50.2300 1 122 5.3E-38 T 29-03-2018 AL539_RS07315 7541a46720e73791cdb2916bd7e5a093 122 SUPERFAMILY SSF52172 1 120 1.29E-37 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS07315 7541a46720e73791cdb2916bd7e5a093 122 SMART SM00448 1 115 1.6E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07315 7541a46720e73791cdb2916bd7e5a093 122 Pfam PF00072 Response regulator receiver domain 3 115 2.0E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS10065 b1d9e9b686b9d9d61fcd6476c452b2c1 179 SUPERFAMILY SSF50249 4 179 3.77E-64 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10065 b1d9e9b686b9d9d61fcd6476c452b2c1 179 Gene3D G3DSA:2.40.50.140 1 120 6.3E-46 T 29-03-2018 AL539_RS10065 b1d9e9b686b9d9d61fcd6476c452b2c1 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 1.7E-63 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL539_RS10065 b1d9e9b686b9d9d61fcd6476c452b2c1 179 Pfam PF00436 Single-strand binding protein family 6 106 1.4E-43 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL539_RS10065 b1d9e9b686b9d9d61fcd6476c452b2c1 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.739 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL539_RS10065 b1d9e9b686b9d9d61fcd6476c452b2c1 179 PIRSF PIRSF002070 2 177 1.0E-36 T 29-03-2018 AL539_RS13685 79de169827a861d8da0fe5d1a6a34de0 192 Gene3D G3DSA:2.60.120.10 2 187 6.8E-16 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS13685 79de169827a861d8da0fe5d1a6a34de0 192 SUPERFAMILY SSF51206 18 139 9.95E-20 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS13685 79de169827a861d8da0fe5d1a6a34de0 192 Pfam PF00027 Cyclic nucleotide-binding domain 30 110 3.8E-8 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS04315 243b42b4e678286e663c5bdd5945fc41 323 PIRSF PIRSF017082 2 323 7.0E-85 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL539_RS04315 243b42b4e678286e663c5bdd5945fc41 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 320 4.0E-28 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AL539_RS04315 243b42b4e678286e663c5bdd5945fc41 323 SUPERFAMILY SSF53850 105 289 1.3E-9 T 29-03-2018 AL539_RS04315 243b42b4e678286e663c5bdd5945fc41 323 Gene3D G3DSA:3.40.190.10 120 228 3.1E-13 T 29-03-2018 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 PIRSF PIRSF500061 5 513 4.3E-156 T 29-03-2018 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 PIRSF PIRSF006429 11 512 1.2E-148 T 29-03-2018 IPR024188 Glutamate synthase large subunit-like protein AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 SMART SM00704 47 82 1.0E-7 T 29-03-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 SMART SM00704 9 46 1.7E-12 T 29-03-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 SUPERFAMILY SSF51395 127 505 3.17E-99 T 29-03-2018 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 11 40 2.4E-11 T 29-03-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 55 77 4.1E-8 T 29-03-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 Pfam PF01645 Conserved region in glutamate synthase 172 480 3.0E-90 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL539_RS19095 6eff041409b647ae3542b16410b874e6 513 Gene3D G3DSA:3.20.20.70 152 511 2.0E-85 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS13535 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 6 100 8.6E-33 T 29-03-2018 AL539_RS13535 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 29-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13535 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL539_RS13535 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL539_RS13535 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 29-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS06480 9b827b9355edb65ba64376ffe3475286 519 Pfam PF00916 Sulfate permease family 13 374 2.6E-56 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL539_RS06480 9b827b9355edb65ba64376ffe3475286 519 Gene3D G3DSA:3.30.750.24 407 499 1.4E-14 T 29-03-2018 IPR002645 STAS domain AL539_RS06480 9b827b9355edb65ba64376ffe3475286 519 SUPERFAMILY SSF52091 416 498 7.26E-12 T 29-03-2018 IPR002645 STAS domain AL539_RS06480 9b827b9355edb65ba64376ffe3475286 519 Pfam PF01740 STAS domain 417 503 1.4E-6 T 29-03-2018 IPR002645 STAS domain AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 Pfam PF12221 Bacterial membrane protein N terminal 1 58 4.9E-14 T 29-03-2018 IPR020980 Menbrane protein HflK, N-terminal AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 SUPERFAMILY SSF117892 126 254 1.23E-21 T 29-03-2018 IPR001107 Band 7 domain AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 TIGRFAM TIGR01933 hflK: HflK protein 91 351 6.3E-121 T 29-03-2018 IPR010201 HflK GO:0016021 AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 PRINTS PR00721 Stomatin signature 143 164 2.2E-6 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 PRINTS PR00721 Stomatin signature 96 118 2.2E-6 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 PRINTS PR00721 Stomatin signature 199 222 2.2E-6 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 SMART SM00244 89 249 2.1E-51 T 29-03-2018 IPR001107 Band 7 domain AL539_RS10640 7d1abb16f1f57351fa7a3100c8aaa96c 401 Pfam PF01145 SPFH domain / Band 7 family 93 264 8.1E-29 T 29-03-2018 IPR001107 Band 7 domain AL539_RS23090 442a25545c1cb4d65255cd3c6dc2a5c6 394 PRINTS PR01035 Tetracycline resistance protein signature 135 157 1.2E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS23090 442a25545c1cb4d65255cd3c6dc2a5c6 394 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.2E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS23090 442a25545c1cb4d65255cd3c6dc2a5c6 394 PRINTS PR01035 Tetracycline resistance protein signature 303 323 1.2E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS23090 442a25545c1cb4d65255cd3c6dc2a5c6 394 SUPERFAMILY SSF103473 4 380 7.19E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS23090 442a25545c1cb4d65255cd3c6dc2a5c6 394 Gene3D G3DSA:1.20.1250.20 197 381 2.6E-16 T 29-03-2018 AL539_RS23090 442a25545c1cb4d65255cd3c6dc2a5c6 394 Gene3D G3DSA:1.20.1250.20 1 190 7.2E-28 T 29-03-2018 AL539_RS23090 442a25545c1cb4d65255cd3c6dc2a5c6 394 Pfam PF07690 Major Facilitator Superfamily 15 348 2.6E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS08915 0f74f02e84e90be8f50befae89d05865 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.937 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AL539_RS08915 0f74f02e84e90be8f50befae89d05865 155 Gene3D G3DSA:1.10.10.10 58 101 4.9E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08915 0f74f02e84e90be8f50befae89d05865 155 Gene3D G3DSA:1.10.10.10 104 155 1.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08915 0f74f02e84e90be8f50befae89d05865 155 Pfam PF02631 RecX family 34 151 3.8E-30 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AL539_RS08915 0f74f02e84e90be8f50befae89d05865 155 Gene3D G3DSA:1.10.10.10 11 57 1.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 Gene3D G3DSA:3.40.1130.10 421 621 3.1E-39 T 29-03-2018 AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 SUPERFAMILY SSF103473 12 424 2.09E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 Pfam PF07690 Major Facilitator Superfamily 20 313 1.5E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 Gene3D G3DSA:1.20.1250.20 6 198 2.1E-9 T 29-03-2018 AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 Gene3D G3DSA:1.20.1250.20 214 420 1.3E-15 T 29-03-2018 AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 Pfam PF01553 Acyltransferase 442 567 1.1E-24 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 SMART SM00563 456 570 3.9E-35 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS17225 30cd1373686a8616ae3d85fe8fe170f7 624 SUPERFAMILY SSF69593 405 605 2.88E-29 T 29-03-2018 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 29-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 Gene3D G3DSA:3.40.50.300 159 344 2.2E-32 T 29-03-2018 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 Gene3D G3DSA:2.70.210.12 2 156 2.6E-53 T 29-03-2018 IPR006169 GTP1/OBG domain AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.99 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.8E-143 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 Pfam PF01018 GTP1/OBG 4 156 1.1E-55 T 29-03-2018 IPR006169 GTP1/OBG domain AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 SUPERFAMILY SSF52540 151 340 1.07E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 PIRSF PIRSF002401 1 375 5.9E-137 T 29-03-2018 IPR035101 GTP-binding protein, Obg-type AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 SUPERFAMILY SSF82051 2 157 4.05E-55 T 29-03-2018 IPR006169 GTP1/OBG domain AL539_RS13935 4f99f951ea71b7d26f834aa8d5b0005f 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.1E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS17810 d567022209689d209a1f966b2aa17734 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 5.5E-43 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS17810 d567022209689d209a1f966b2aa17734 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 6.6E-93 T 29-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AL539_RS23165 e800815fcfd37e3269862e2c064cae83 361 Gene3D G3DSA:2.40.160.10 10 361 2.9E-39 T 29-03-2018 AL539_RS23165 e800815fcfd37e3269862e2c064cae83 361 SUPERFAMILY SSF56935 26 361 9.16E-50 T 29-03-2018 AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 Gene3D G3DSA:1.10.10.10 131 238 1.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 Pfam PF00072 Response regulator receiver domain 6 113 3.3E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 Gene3D G3DSA:3.40.50.2300 1 130 4.2E-33 T 29-03-2018 AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 SUPERFAMILY SSF52172 2 130 3.98E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 SMART SM00448 4 114 2.9E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS14725 bc0160e79b7de742bdb44ed0d30f34bb 238 SMART SM00862 156 232 2.4E-14 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS04530 96ba664e3e4cdda87a363f30f96998b0 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 3.6E-119 T 29-03-2018 IPR012843 Type III secretion system YscD/HrpQ AL539_RS04530 96ba664e3e4cdda87a363f30f96998b0 433 Gene3D G3DSA:2.60.200.20 1 125 2.4E-8 T 29-03-2018 AL539_RS04530 96ba664e3e4cdda87a363f30f96998b0 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 1.9E-17 T 29-03-2018 IPR032030 YscD, cytoplasmic domain AL539_RS04530 96ba664e3e4cdda87a363f30f96998b0 433 ProDom PD128471 PLASMID Y4YQ BLL1803 TRANSMEMBRANE MLR6347 MEMBRANE ID195 299 413 0.003 T 29-03-2018 AL539_RS04530 96ba664e3e4cdda87a363f30f96998b0 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 1.6E-123 T 29-03-2018 IPR032034 Yop protein translocation protein D, periplasmic domain AL539_RS09100 3b8ac1e2f2e6db60eb6026a3926eecb9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 AL539_RS09100 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Gene3D G3DSA:3.30.1910.10 1 62 4.6E-30 T 29-03-2018 AL539_RS09100 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.9E-29 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 2.9E-35 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 SUPERFAMILY SSF48452 36 227 1.06E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 Gene3D G3DSA:1.20.58.280 237 368 2.4E-4 T 29-03-2018 AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 Gene3D G3DSA:3.30.70.270 369 527 1.6E-44 T 29-03-2018 AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 4.4E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 SMART SM00267 358 526 1.4E-33 T 29-03-2018 IPR000160 GGDEF domain AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 Gene3D G3DSA:1.25.40.10 21 235 2.5E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS24005 be4130ec1aa5ecc0c104894b803a1c01 527 SUPERFAMILY SSF55073 374 524 1.18E-36 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS04255 e1f54f0c70ed7142d2896d5f03a8a1d1 222 SUPERFAMILY SSF102114 27 117 1.7E-5 T 29-03-2018 AL539_RS04255 e1f54f0c70ed7142d2896d5f03a8a1d1 222 PIRSF PIRSF000370 1 222 1.5E-69 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL539_RS04255 e1f54f0c70ed7142d2896d5f03a8a1d1 222 Pfam PF13394 4Fe-4S single cluster domain 23 129 5.6E-11 T 29-03-2018 AL539_RS04255 e1f54f0c70ed7142d2896d5f03a8a1d1 222 Gene3D G3DSA:3.20.20.70 27 207 6.5E-13 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS04255 e1f54f0c70ed7142d2896d5f03a8a1d1 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.164 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL539_RS04255 e1f54f0c70ed7142d2896d5f03a8a1d1 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 1.3E-111 T 29-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL539_RS25770 493d828549143048fd98c817de224283 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 7 101 1.3E-36 T 29-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AL539_RS25770 493d828549143048fd98c817de224283 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 8.8E-18 T 29-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AL539_RS20125 cf8b3d9e8fe4628289de4ecc5c6b5426 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 374 457 4.4E-33 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL539_RS20125 cf8b3d9e8fe4628289de4ecc5c6b5426 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 341 4.4E-76 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL539_RS20125 cf8b3d9e8fe4628289de4ecc5c6b5426 466 Gene3D G3DSA:3.40.50.2300 372 466 7.6E-34 T 29-03-2018 AL539_RS20125 cf8b3d9e8fe4628289de4ecc5c6b5426 466 SUPERFAMILY SSF52794 372 465 2.75E-29 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS20125 cf8b3d9e8fe4628289de4ecc5c6b5426 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 375 465 4.6E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS25780 0b43768c9ee0698f80126459f8f7d7a4 368 Gene3D G3DSA:3.20.20.70 1 367 6.1E-103 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS25780 0b43768c9ee0698f80126459f8f7d7a4 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 337 1.3E-71 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL539_RS25780 0b43768c9ee0698f80126459f8f7d7a4 368 SUPERFAMILY SSF51395 2 353 3.1E-99 T 29-03-2018 AL539_RS02300 564252ea03bb48db5a99ceb7fcef8a3c 262 SUPERFAMILY SSF46689 28 86 1.39E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS02300 564252ea03bb48db5a99ceb7fcef8a3c 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 4.6E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS02300 564252ea03bb48db5a99ceb7fcef8a3c 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 4.6E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS02300 564252ea03bb48db5a99ceb7fcef8a3c 262 Gene3D G3DSA:1.10.10.60 25 71 2.9E-10 T 29-03-2018 AL539_RS02300 564252ea03bb48db5a99ceb7fcef8a3c 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 3.6E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS02300 564252ea03bb48db5a99ceb7fcef8a3c 262 Gene3D G3DSA:1.10.10.60 72 251 1.1E-5 T 29-03-2018 AL539_RS10275 752abd7796772de2ddc2440b2ebea8a2 366 Pfam PF01761 3-dehydroquinate synthase 72 329 4.7E-111 T 29-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL539_RS10275 752abd7796772de2ddc2440b2ebea8a2 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 362 43.418 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL539_RS10275 752abd7796772de2ddc2440b2ebea8a2 366 PIRSF PIRSF001455 22 363 2.6E-107 T 29-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL539_RS10275 752abd7796772de2ddc2440b2ebea8a2 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 5.4E-120 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL539_RS10275 752abd7796772de2ddc2440b2ebea8a2 366 Gene3D G3DSA:3.40.50.1970 3 176 1.6E-50 T 29-03-2018 AL539_RS10275 752abd7796772de2ddc2440b2ebea8a2 366 Gene3D G3DSA:1.20.1090.10 177 366 5.4E-70 T 29-03-2018 AL539_RS10275 752abd7796772de2ddc2440b2ebea8a2 366 SUPERFAMILY SSF56796 4 360 4.32E-117 T 29-03-2018 AL539_RS08045 f7370b09f8d4292cf9dc63f171099b63 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 296 4.7E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS08045 f7370b09f8d4292cf9dc63f171099b63 306 SUPERFAMILY SSF55073 146 302 6.98E-44 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS08045 f7370b09f8d4292cf9dc63f171099b63 306 Gene3D G3DSA:3.30.450.20 4 138 3.1E-9 T 29-03-2018 AL539_RS08045 f7370b09f8d4292cf9dc63f171099b63 306 SMART SM00267 130 301 5.6E-53 T 29-03-2018 IPR000160 GGDEF domain AL539_RS08045 f7370b09f8d4292cf9dc63f171099b63 306 Gene3D G3DSA:3.30.70.270 139 306 5.9E-51 T 29-03-2018 AL539_RS08045 f7370b09f8d4292cf9dc63f171099b63 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 299 7.2E-46 T 29-03-2018 IPR000160 GGDEF domain AL539_RS01255 edd5afb3db372b570b9d5da6f3bf5995 329 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 14 328 9.6E-87 T 29-03-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain AL539_RS06345 ed78b9090a86cc63ed6be57f67913394 405 Pfam PF00480 ROK family 88 390 1.2E-69 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL539_RS06345 ed78b9090a86cc63ed6be57f67913394 405 Gene3D G3DSA:1.10.10.10 10 81 6.6E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06345 ed78b9090a86cc63ed6be57f67913394 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06345 ed78b9090a86cc63ed6be57f67913394 405 SUPERFAMILY SSF53067 86 395 7.21E-55 T 29-03-2018 AL539_RS06345 ed78b9090a86cc63ed6be57f67913394 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 AL539_RS06345 ed78b9090a86cc63ed6be57f67913394 405 Gene3D G3DSA:3.30.420.40 84 224 4.4E-30 T 29-03-2018 AL539_RS06345 ed78b9090a86cc63ed6be57f67913394 405 Gene3D G3DSA:3.30.420.40 225 375 2.0E-40 T 29-03-2018 AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 SUPERFAMILY SSF52540 331 571 2.97E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 Pfam PF00005 ABC transporter 353 501 6.4E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 Gene3D G3DSA:1.20.1560.10 1 322 3.8E-65 T 29-03-2018 AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 Gene3D G3DSA:3.40.50.300 323 577 5.7E-69 T 29-03-2018 AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 SMART SM00382 362 547 2.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 Pfam PF00664 ABC transporter transmembrane region 22 290 2.3E-43 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS03195 29f12aedd8f432b99b6c93547a4b3a80 591 SUPERFAMILY SSF90123 8 322 1.02E-70 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS11600 570ed5d612acac4962363a464f5b22d8 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.4E-255 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL539_RS11600 570ed5d612acac4962363a464f5b22d8 842 PIRSF PIRSF001444 1 842 0.0 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL539_RS11600 570ed5d612acac4962363a464f5b22d8 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 1.2E-76 T 29-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AL539_RS20775 729fc43aed6ab644a056776550497438 389 Gene3D G3DSA:3.40.710.10 13 299 1.5E-55 T 29-03-2018 AL539_RS20775 729fc43aed6ab644a056776550497438 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 5.5E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS20775 729fc43aed6ab644a056776550497438 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 5.5E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS20775 729fc43aed6ab644a056776550497438 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 5.5E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS20775 729fc43aed6ab644a056776550497438 389 SUPERFAMILY SSF56601 8 280 4.64E-83 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS20775 729fc43aed6ab644a056776550497438 389 SUPERFAMILY SSF69189 280 372 3.14E-25 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS20775 729fc43aed6ab644a056776550497438 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 7.9E-23 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS20775 729fc43aed6ab644a056776550497438 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 1.3E-83 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL539_RS20775 729fc43aed6ab644a056776550497438 389 SMART SM00936 280 370 1.7E-30 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS20775 729fc43aed6ab644a056776550497438 389 Gene3D G3DSA:2.60.410.10 300 370 7.0E-20 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS15660 c6a1fe67d25cdce16ad8494f0f8333c6 423 Gene3D G3DSA:1.10.287.1120 382 422 2.3E-8 T 29-03-2018 AL539_RS15660 c6a1fe67d25cdce16ad8494f0f8333c6 423 SUPERFAMILY SSF116734 6 211 3.27E-45 T 29-03-2018 AL539_RS15660 c6a1fe67d25cdce16ad8494f0f8333c6 423 Pfam PF01420 Type I restriction modification DNA specificity domain 223 396 8.1E-27 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS15660 c6a1fe67d25cdce16ad8494f0f8333c6 423 Pfam PF01420 Type I restriction modification DNA specificity domain 22 187 1.1E-22 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS15660 c6a1fe67d25cdce16ad8494f0f8333c6 423 Gene3D G3DSA:3.90.220.20 182 381 3.5E-37 T 29-03-2018 AL539_RS15660 c6a1fe67d25cdce16ad8494f0f8333c6 423 Gene3D G3DSA:3.90.220.20 3 181 7.3E-37 T 29-03-2018 AL539_RS15660 c6a1fe67d25cdce16ad8494f0f8333c6 423 SUPERFAMILY SSF116734 221 417 1.18E-42 T 29-03-2018 AL539_RS13695 913b74b81adef43b153b091e5781b6fe 295 Gene3D G3DSA:3.30.950.10 166 294 2.1E-37 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS13695 913b74b81adef43b153b091e5781b6fe 295 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 43 252 6.6E-46 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS13695 913b74b81adef43b153b091e5781b6fe 295 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 46 60 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS13695 913b74b81adef43b153b091e5781b6fe 295 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 41 274 7.6E-94 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS13695 913b74b81adef43b153b091e5781b6fe 295 SUPERFAMILY SSF53790 37 284 9.03E-80 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS13695 913b74b81adef43b153b091e5781b6fe 295 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 121 154 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS13695 913b74b81adef43b153b091e5781b6fe 295 Gene3D G3DSA:3.40.1010.10 41 165 4.3E-36 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.762 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 SUPERFAMILY SSF53681 112 262 1.13E-33 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 SUPERFAMILY SSF53681 8 108 2.48E-31 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 232 7.8E-69 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 2.2E-27 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 Gene3D G3DSA:3.40.50.1860 128 254 9.7E-26 T 29-03-2018 AL539_RS11345 7e17c001b4cf1128fa7ef223f8f3eff8 267 Gene3D G3DSA:3.40.50.1860 5 127 2.4E-27 T 29-03-2018 AL539_RS19045 6f12d34c961785843b976f0dc13bb2e5 291 Pfam PF00582 Universal stress protein family 219 286 1.5E-6 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS19045 6f12d34c961785843b976f0dc13bb2e5 291 Gene3D G3DSA:3.40.50.620 11 291 6.3E-16 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS19045 6f12d34c961785843b976f0dc13bb2e5 291 SUPERFAMILY SSF52402 153 287 3.93E-9 T 29-03-2018 AL539_RS21180 753e28eec750ea2029de628b20d0f4b2 293 SUPERFAMILY SSF46785 2 109 5.44E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21180 753e28eec750ea2029de628b20d0f4b2 293 Gene3D G3DSA:3.40.190.10 87 173 2.1E-17 T 29-03-2018 AL539_RS21180 753e28eec750ea2029de628b20d0f4b2 293 SUPERFAMILY SSF53850 89 292 5.12E-31 T 29-03-2018 AL539_RS21180 753e28eec750ea2029de628b20d0f4b2 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21180 753e28eec750ea2029de628b20d0f4b2 293 Gene3D G3DSA:1.10.10.10 1 82 9.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21180 753e28eec750ea2029de628b20d0f4b2 293 Pfam PF03466 LysR substrate binding domain 89 291 1.4E-28 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21180 753e28eec750ea2029de628b20d0f4b2 293 Gene3D G3DSA:3.40.190.10 174 261 1.8E-9 T 29-03-2018 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 SUPERFAMILY SSF53671 4 333 6.42E-98 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.6E-45 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.655 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.2E-132 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 Gene3D G3DSA:3.40.50.1370 148 319 1.6E-53 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 Gene3D G3DSA:3.40.50.1370 1 147 2.0E-52 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.7E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 7.6E-56 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL539_RS09850 09ddbad30df7757d4ce80f8087cc35f7 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 SUPERFAMILY SSF53850 113 281 1.28E-25 T 29-03-2018 AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 Gene3D G3DSA:3.40.190.10 177 267 7.3E-21 T 29-03-2018 AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 Gene3D G3DSA:1.10.10.10 1 93 4.1E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 Gene3D G3DSA:3.40.190.10 94 176 1.1E-11 T 29-03-2018 AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-23 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 SUPERFAMILY SSF46785 1 85 2.18E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 Pfam PF03466 LysR substrate binding domain 116 283 1.0E-29 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS19725 9bc76f2265427c91b2b9a396b089f02c 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20510 8dc080f465211423b09c820a32851ba0 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 7.1E-42 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AL539_RS20510 8dc080f465211423b09c820a32851ba0 104 PIRSF PIRSF028773 1 104 1.4E-45 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AL539_RS20510 8dc080f465211423b09c820a32851ba0 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.937 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AL539_RS20510 8dc080f465211423b09c820a32851ba0 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 7.0E-45 T 29-03-2018 IPR007458 Protein of unknown function DUF496 AL539_RS23865 ea5064e8f34f9b27113f445da09558d3 251 SUPERFAMILY SSF49354 21 152 3.4E-26 T 29-03-2018 IPR008962 PapD-like AL539_RS23865 ea5064e8f34f9b27113f445da09558d3 251 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 151 2.0E-20 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AL539_RS23865 ea5064e8f34f9b27113f445da09558d3 251 Gene3D G3DSA:2.60.40.10 25 153 7.1E-27 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS18900 c6ccea8070a2f3bac1cf34f4cf73e242 133 SUPERFAMILY SSF54593 9 132 2.01E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS18900 c6ccea8070a2f3bac1cf34f4cf73e242 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 5.0E-13 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS18900 c6ccea8070a2f3bac1cf34f4cf73e242 133 Gene3D G3DSA:3.10.180.10 1 133 9.4E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 SMART SM00267 352 516 1.7E-35 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 Gene3D G3DSA:3.30.70.270 357 522 1.6E-42 T 29-03-2018 AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 SUPERFAMILY SSF55073 368 517 1.1E-35 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 Pfam PF00563 EAL domain 532 661 7.2E-29 T 29-03-2018 IPR001633 EAL domain AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 511 7.2E-33 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 SMART SM00052 526 666 2.2E-7 T 29-03-2018 IPR001633 EAL domain AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 Gene3D G3DSA:3.30.450.20 37 208 2.3E-6 T 29-03-2018 AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 SUPERFAMILY SSF141868 532 662 1.83E-30 T 29-03-2018 IPR001633 EAL domain AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 513 3.7E-33 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15515 c81f12dcbc9419cee856ba11961c535d 667 Gene3D G3DSA:3.20.20.450 523 667 1.1E-33 T 29-03-2018 IPR001633 EAL domain AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 SMART SM00283 406 667 2.2E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 SUPERFAMILY SSF58104 364 668 6.15E-61 T 29-03-2018 AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 Gene3D G3DSA:1.10.287.950 443 671 1.3E-44 T 29-03-2018 AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 Gene3D G3DSA:1.10.287.950 277 442 2.5E-9 T 29-03-2018 AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 633 1.3E-38 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 1.1E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 334 1.1E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS03450 ff66465ece6959babef926fdc78a952e 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 1.1E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 1.0E-49 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 464 8.7E-197 T 29-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 1.0E-94 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 Gene3D G3DSA:3.30.1360.60 5 81 1.9E-26 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 SUPERFAMILY SSF55604 6 82 1.12E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 8.4E-24 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS20805 4be676537e6148879b2687208222dcf2 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.0E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS11170 43e360c5b68d59282627823f0b6f01ff 355 Gene3D G3DSA:3.20.20.210 1 355 1.2E-109 T 29-03-2018 AL539_RS11170 43e360c5b68d59282627823f0b6f01ff 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL539_RS11170 43e360c5b68d59282627823f0b6f01ff 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL539_RS11170 43e360c5b68d59282627823f0b6f01ff 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.4E-139 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL539_RS11170 43e360c5b68d59282627823f0b6f01ff 355 SUPERFAMILY SSF51726 1 354 2.79E-122 T 29-03-2018 AL539_RS11170 43e360c5b68d59282627823f0b6f01ff 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.745 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL539_RS11170 43e360c5b68d59282627823f0b6f01ff 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 3.4E-141 T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL539_RS13380 5b5db08afa379b9716565d07884444dc 391 Gene3D G3DSA:3.40.640.10 8 249 8.4E-43 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS13380 5b5db08afa379b9716565d07884444dc 391 SUPERFAMILY SSF53383 8 386 2.02E-103 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS13380 5b5db08afa379b9716565d07884444dc 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 382 7.0E-96 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL539_RS13380 5b5db08afa379b9716565d07884444dc 391 Gene3D G3DSA:3.90.1150.10 250 391 5.7E-31 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS13380 5b5db08afa379b9716565d07884444dc 391 PIRSF PIRSF000390 1 389 4.9E-119 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.1E-69 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 Gene3D G3DSA:3.40.190.80 146 265 7.5E-36 T 29-03-2018 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 7.1E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 7.1E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 7.1E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 7.1E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 7.1E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 7.1E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.3E-35 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.3E-35 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.3E-35 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.3E-35 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 Gene3D G3DSA:3.30.540.10 1 145 1.7E-44 T 29-03-2018 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 SUPERFAMILY SSF56655 1 259 3.01E-83 T 29-03-2018 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AL539_RS15285 742333083a1237fbc0677c73b4b92d4b 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AL539_RS26055 ec71525be37b01215cbcffca30b5121f 278 SUPERFAMILY SSF52540 6 227 3.8E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS26055 ec71525be37b01215cbcffca30b5121f 278 Gene3D G3DSA:3.40.50.300 1 277 3.3E-60 T 29-03-2018 AL539_RS26055 ec71525be37b01215cbcffca30b5121f 278 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS26055 ec71525be37b01215cbcffca30b5121f 278 SMART SM00382 34 216 2.0E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS26055 ec71525be37b01215cbcffca30b5121f 278 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.9E-106 T 29-03-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AL539_RS26055 ec71525be37b01215cbcffca30b5121f 278 Pfam PF00005 ABC transporter 25 166 1.8E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 Gene3D G3DSA:1.10.10.10 8 88 1.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 Gene3D G3DSA:3.40.190.10 98 181 1.7E-7 T 29-03-2018 AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 Gene3D G3DSA:3.40.190.10 182 269 7.9E-26 T 29-03-2018 AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 SUPERFAMILY SSF46785 10 116 1.59E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 SUPERFAMILY SSF53850 95 301 8.22E-39 T 29-03-2018 AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 Pfam PF03466 LysR substrate binding domain 94 301 1.4E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23795 118126685f574c7a914b0c41b65ff34a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23585 3675430f523bc9f970171ace396cb20f 807 ProSitePatterns PS00850 Glycine radical domain signature. 778 786 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_RS23585 3675430f523bc9f970171ace396cb20f 807 Pfam PF01228 Glycine radical 685 788 5.1E-31 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AL539_RS23585 3675430f523bc9f970171ace396cb20f 807 Gene3D G3DSA:3.20.70.20 6 807 7.2E-275 T 29-03-2018 AL539_RS23585 3675430f523bc9f970171ace396cb20f 807 Pfam PF02901 Pyruvate formate lyase-like 8 668 2.1E-217 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL539_RS23585 3675430f523bc9f970171ace396cb20f 807 SUPERFAMILY SSF51998 3 806 1.43E-222 T 29-03-2018 AL539_RS23585 3675430f523bc9f970171ace396cb20f 807 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 7 807 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL539_RS23585 3675430f523bc9f970171ace396cb20f 807 PIRSF PIRSF000379 28 807 1.1E-168 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL539_RS00355 b9363fd2be8c64fe01016f33dd54feb8 240 Pfam PF01936 NYN domain 5 139 8.2E-31 T 29-03-2018 IPR021139 NYN domain, limkain-b1-type AL539_RS00355 b9363fd2be8c64fe01016f33dd54feb8 240 Pfam PF12872 OST-HTH/LOTUS domain 166 223 6.1E-12 T 29-03-2018 IPR025605 OST-HTH/LOTUS domain AL539_RS00355 b9363fd2be8c64fe01016f33dd54feb8 240 Gene3D G3DSA:3.40.50.1010 2 143 1.2E-21 T 29-03-2018 IPR029060 PIN domain-like AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 Gene3D G3DSA:2.60.120.10 6 156 9.9E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 Gene3D G3DSA:1.10.10.60 157 213 3.7E-9 T 29-03-2018 AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 Gene3D G3DSA:1.10.10.60 215 261 2.4E-8 T 29-03-2018 AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 SUPERFAMILY SSF46689 213 260 1.08E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 SMART SM00342 176 258 2.3E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 Pfam PF12833 Helix-turn-helix domain 182 260 1.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 SUPERFAMILY SSF51182 20 185 3.34E-10 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 4.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS24415 c89fde90bd9f9f2ecb60e9e620cf10da 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 4.3E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS06750 ab190358cff60f049e7111510f3b31d8 214 SMART SM00479 18 204 6.2E-31 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS06750 ab190358cff60f049e7111510f3b31d8 214 SUPERFAMILY SSF53098 10 208 3.09E-57 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS06750 ab190358cff60f049e7111510f3b31d8 214 Pfam PF00929 Exonuclease 20 195 3.0E-46 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS06750 ab190358cff60f049e7111510f3b31d8 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.3E-100 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL539_RS06750 ab190358cff60f049e7111510f3b31d8 214 Gene3D G3DSA:3.30.420.10 9 206 2.0E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS06750 ab190358cff60f049e7111510f3b31d8 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.609 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 Gene3D G3DSA:3.30.565.10 180 348 3.9E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 Gene3D G3DSA:1.20.120.620 13 113 2.7E-19 T 29-03-2018 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 SMART SM00387 233 343 1.2E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 SMART SM00388 123 191 7.0E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 SUPERFAMILY SSF55874 181 341 1.7E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 342 1.7E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 130 191 9.2E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 Gene3D G3DSA:1.10.287.130 114 179 2.7E-11 T 29-03-2018 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 Pfam PF13493 Domain of unknown function (DUF4118) 16 118 7.0E-22 T 29-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 SUPERFAMILY SSF47384 112 192 7.06E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 5.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 340 5.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 5.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS24205 35f56ad5273cce6fadd4f8ffef4a1db0 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 5.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS26090 b2ea058fc652380fb36827386160262f 409 SMART SM00331 164 393 1.3E-19 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS26090 b2ea058fc652380fb36827386160262f 409 SUPERFAMILY SSF52172 2 157 5.69E-33 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS26090 b2ea058fc652380fb36827386160262f 409 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 393 4.1E-39 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS26090 b2ea058fc652380fb36827386160262f 409 SUPERFAMILY SSF81606 172 391 4.18E-8 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS26090 b2ea058fc652380fb36827386160262f 409 Gene3D G3DSA:3.40.50.2300 2 140 4.4E-30 T 29-03-2018 AL539_RS26090 b2ea058fc652380fb36827386160262f 409 Pfam PF00072 Response regulator receiver domain 4 117 5.3E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS26090 b2ea058fc652380fb36827386160262f 409 Gene3D G3DSA:3.60.40.10 141 395 5.9E-27 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL539_RS26090 b2ea058fc652380fb36827386160262f 409 SMART SM00448 2 116 1.1E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Pfam PF00512 His Kinase A (phospho-acceptor) domain 400 465 5.1E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SUPERFAMILY SSF55874 454 624 6.16E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Gene3D G3DSA:3.40.50.2300 926 1058 2.5E-39 T 29-03-2018 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SMART SM00388 400 465 4.2E-25 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SUPERFAMILY SSF47384 388 465 8.63E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SUPERFAMILY SSF52172 774 899 1.15E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SMART SM00448 937 1054 3.5E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SMART SM00448 774 891 5.4E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SUPERFAMILY SSF52172 935 1057 3.13E-37 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 606 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 625 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 581 2.8E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Gene3D G3DSA:1.10.287.130 390 461 2.2E-20 T 29-03-2018 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 SMART SM00387 512 628 2.0E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Gene3D G3DSA:3.40.50.2300 769 925 9.4E-40 T 29-03-2018 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Gene3D G3DSA:3.30.565.10 469 636 7.1E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Pfam PF00072 Response regulator receiver domain 776 891 1.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Pfam PF00072 Response regulator receiver domain 939 1054 6.1E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS02850 69b435549fb4c3f4590a873a72507fa4 1058 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 624 5.1E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS24755 fe865dc355fa1032366abaa2b9dbbc41 361 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 224 338 1.9E-15 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL539_RS24755 fe865dc355fa1032366abaa2b9dbbc41 361 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 221 5.5E-27 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL539_RS24755 fe865dc355fa1032366abaa2b9dbbc41 361 SUPERFAMILY SSF56935 22 335 1.28E-57 T 29-03-2018 AL539_RS24755 fe865dc355fa1032366abaa2b9dbbc41 361 Gene3D G3DSA:2.40.160.60 21 358 1.4E-54 T 29-03-2018 AL539_RS09395 852d57d7f0cb888e8af1355905ef677c 128 Gene3D G3DSA:3.10.180.10 1 117 2.7E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS09395 852d57d7f0cb888e8af1355905ef677c 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 25 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL539_RS09395 852d57d7f0cb888e8af1355905ef677c 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 109 1.2E-7 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS09395 852d57d7f0cb888e8af1355905ef677c 128 SUPERFAMILY SSF54593 1 112 1.93E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 SUPERFAMILY SSF64397 4 231 5.23E-76 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 Gene3D G3DSA:1.10.287.480 180 224 1.4E-19 T 29-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 Gene3D G3DSA:3.90.1280.10 225 280 1.5E-19 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 PIRSF PIRSF005261 1 284 2.4E-70 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 SUPERFAMILY SSF118352 223 281 1.03E-17 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 Pfam PF01430 Hsp33 protein 6 272 6.4E-78 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.979 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL539_RS12875 ee9d3216a7aa9021df8854dd1f4d9f39 291 Gene3D G3DSA:3.55.30.10 1 175 2.3E-59 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL539_RS21425 b1dfe90a849914573cb0a7f958484afb 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 182 5.3E-56 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AL539_RS21425 b1dfe90a849914573cb0a7f958484afb 299 Gene3D G3DSA:1.20.1330.10 38 274 6.2E-24 T 29-03-2018 AL539_RS21425 b1dfe90a849914573cb0a7f958484afb 299 SUPERFAMILY SSF64518 1 299 8.24E-55 T 29-03-2018 AL539_RS21425 b1dfe90a849914573cb0a7f958484afb 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 2.5E-16 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS14665 95bb7323883862388b1909f3afe4b54d 274 Gene3D G3DSA:3.40.50.1980 8 116 1.2E-25 T 29-03-2018 AL539_RS14665 95bb7323883862388b1909f3afe4b54d 274 Pfam PF01497 Periplasmic binding protein 25 246 2.2E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL539_RS14665 95bb7323883862388b1909f3afe4b54d 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 271 50.374 T 29-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AL539_RS14665 95bb7323883862388b1909f3afe4b54d 274 SUPERFAMILY SSF53807 21 267 1.18E-56 T 29-03-2018 AL539_RS14665 95bb7323883862388b1909f3afe4b54d 274 Gene3D G3DSA:3.40.50.1980 117 271 2.4E-27 T 29-03-2018 AL539_RS18600 66d10dd14e20f6c62c26421732e37557 110 Gene3D G3DSA:3.30.70.120 1 107 1.6E-35 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_RS18600 66d10dd14e20f6c62c26421732e37557 110 SUPERFAMILY SSF54913 3 106 7.41E-34 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_RS18600 66d10dd14e20f6c62c26421732e37557 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 7.6E-33 T 29-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AL539_RS03765 178a34666b1445b3e78c016b0458865b 315 SUPERFAMILY SSF52402 166 308 4.86E-23 T 29-03-2018 AL539_RS03765 178a34666b1445b3e78c016b0458865b 315 Pfam PF00582 Universal stress protein family 4 148 7.4E-14 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS03765 178a34666b1445b3e78c016b0458865b 315 Pfam PF00582 Universal stress protein family 179 301 1.2E-14 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS03765 178a34666b1445b3e78c016b0458865b 315 Gene3D G3DSA:3.40.50.620 165 304 7.0E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS03765 178a34666b1445b3e78c016b0458865b 315 Gene3D G3DSA:3.40.50.620 2 159 3.2E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS03765 178a34666b1445b3e78c016b0458865b 315 SUPERFAMILY SSF52402 4 157 1.09E-25 T 29-03-2018 AL539_RS10795 8ac3ee0e470c0594f4802a446f29b4db 375 SUPERFAMILY SSF51261 143 373 1.26E-48 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS10795 8ac3ee0e470c0594f4802a446f29b4db 375 Gene3D G3DSA:1.20.1170.10 122 244 0.047 T 29-03-2018 AL539_RS10795 8ac3ee0e470c0594f4802a446f29b4db 375 Gene3D G3DSA:1.20.5.50 29 120 2.6E-4 T 29-03-2018 AL539_RS10795 8ac3ee0e470c0594f4802a446f29b4db 375 Gene3D G3DSA:2.70.70.10 245 375 9.1E-31 T 29-03-2018 AL539_RS10795 8ac3ee0e470c0594f4802a446f29b4db 375 Pfam PF01551 Peptidase family M23 276 369 1.1E-24 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS24995 5021be2b5d4357134fa52ae4aa1ff345 296 SUPERFAMILY SSF103481 44 142 1.27E-8 T 29-03-2018 AL539_RS24995 5021be2b5d4357134fa52ae4aa1ff345 296 Pfam PF00892 EamA-like transporter family 151 282 3.9E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS24995 5021be2b5d4357134fa52ae4aa1ff345 296 Pfam PF00892 EamA-like transporter family 8 142 5.2E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS24995 5021be2b5d4357134fa52ae4aa1ff345 296 SUPERFAMILY SSF103481 193 285 6.41E-9 T 29-03-2018 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF69742 1 156 7.32E-47 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 Gene3D G3DSA:1.10.1200.70 330 416 5.1E-23 T 29-03-2018 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 2.9E-144 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 29-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.747 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 1.5E-50 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 PIRSF PIRSF000445 1 418 2.1E-156 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF69075 315 416 3.66E-29 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 9.9E-24 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF51735 160 313 7.28E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 Gene3D G3DSA:3.40.50.720 159 311 1.1E-24 T 29-03-2018 AL539_RS16290 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 5.2E-49 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL539_RS06840 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 Pfam PF00884 Sulfatase 266 515 9.8E-24 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS06840 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 Gene3D G3DSA:3.40.720.10 256 548 2.4E-32 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS06840 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 SUPERFAMILY SSF53649 257 584 4.07E-51 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS06840 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 8.6E-99 T 29-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AL539_RS06840 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 PIRSF PIRSF004950 6 600 3.9E-251 T 29-03-2018 IPR012159 Inner membrane protein YejM AL539_RS17920 90d4b7bea4e585751ab1d32c0e7c40ba 154 Gene3D G3DSA:3.10.450.40 3 145 8.3E-19 T 29-03-2018 AL539_RS17920 90d4b7bea4e585751ab1d32c0e7c40ba 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 144 5.1E-32 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AL539_RS17920 90d4b7bea4e585751ab1d32c0e7c40ba 154 SUPERFAMILY SSF160719 33 141 6.93E-8 T 29-03-2018 AL539_RS17920 90d4b7bea4e585751ab1d32c0e7c40ba 154 Pfam PF04965 Gene 25-like lysozyme 31 130 2.7E-17 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL539_RS01795 75677c610c7a8b0e4426af652a6a3b98 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.5E-94 T 29-03-2018 IPR014319 Phage shock protein, PspA AL539_RS01795 75677c610c7a8b0e4426af652a6a3b98 223 Gene3D G3DSA:1.20.1170.10 4 223 2.6E-5 T 29-03-2018 AL539_RS01795 75677c610c7a8b0e4426af652a6a3b98 223 Pfam PF04012 PspA/IM30 family 2 217 1.7E-61 T 29-03-2018 IPR007157 PspA/IM30 AL539_RS22185 8ed8ccf42dea5992af40e848fe062cbc 171 Gene3D G3DSA:3.40.630.30 2 171 2.0E-26 T 29-03-2018 AL539_RS22185 8ed8ccf42dea5992af40e848fe062cbc 171 SUPERFAMILY SSF55729 2 170 1.83E-35 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS22185 8ed8ccf42dea5992af40e848fe062cbc 171 Pfam PF13302 Acetyltransferase (GNAT) domain 10 146 2.8E-21 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS00925 92a7fff4592a47801216d084b094ca11 314 SUPERFAMILY SSF90257 184 298 7.59E-5 T 29-03-2018 AL539_RS00925 92a7fff4592a47801216d084b094ca11 314 Pfam PF11740 Plasmid replication region DNA-binding N-term 11 122 3.5E-13 T 29-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain AL539_RS00925 92a7fff4592a47801216d084b094ca11 314 Gene3D G3DSA:1.20.1170.10 50 313 4.6E-10 T 29-03-2018 AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 Pfam PF07219 HemY protein N-terminus 26 132 3.6E-26 T 29-03-2018 IPR010817 HemY, N-terminal AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 Gene3D G3DSA:1.25.40.10 83 223 1.8E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 SMART SM00028 327 360 0.0011 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 9.0E-111 T 29-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 SUPERFAMILY SSF48452 260 359 1.41E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 SUPERFAMILY SSF48452 34 217 1.41E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 Gene3D G3DSA:1.25.40.10 255 393 3.0E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS11620 082f47c3a926f38c43a33593d4d9e65b 393 SUPERFAMILY SSF48452 273 392 1.18E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS15725 d91dffd8d7831318d2d2f6333ae53df0 119 Gene3D G3DSA:3.30.1450.10 35 103 4.4E-11 T 29-03-2018 AL539_RS15725 d91dffd8d7831318d2d2f6333ae53df0 119 Pfam PF04355 SmpA / OmlA family 35 103 2.3E-25 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AL539_RS15725 d91dffd8d7831318d2d2f6333ae53df0 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.066 T 29-03-2018 IPR026592 Outer membrane protein assembly factor BamE AL539_RS05150 47ed9be87a4afe82b9ab59393e55094f 94 Gene3D G3DSA:1.10.1220.10 2 42 7.5E-9 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL539_RS05150 47ed9be87a4afe82b9ab59393e55094f 94 Pfam PF04221 RelB antitoxin 5 44 4.8E-5 T 29-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.1E-81 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.1E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.1E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.1E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.1E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 SUPERFAMILY SSF55681 97 464 1.85E-95 T 29-03-2018 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 6.9E-12 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.2E-207 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 Gene3D G3DSA:2.40.50.140 8 109 5.4E-19 T 29-03-2018 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 SUPERFAMILY SSF50249 16 101 2.57E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.768 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL539_RS05640 b45b4a99d1222e7baed35224f0510e7c 466 Gene3D G3DSA:3.30.930.10 126 465 3.4E-92 T 29-03-2018 AL539_RS23525 c05928b65a603b9b9ddcda1f1369a810 289 Pfam PF00892 EamA-like transporter family 146 275 2.6E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS23525 c05928b65a603b9b9ddcda1f1369a810 289 Pfam PF00892 EamA-like transporter family 4 135 3.5E-6 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS23525 c05928b65a603b9b9ddcda1f1369a810 289 SUPERFAMILY SSF103481 39 139 4.05E-8 T 29-03-2018 AL539_RS23525 c05928b65a603b9b9ddcda1f1369a810 289 SUPERFAMILY SSF103481 184 280 3.01E-10 T 29-03-2018 AL539_RS21310 aa1ad287cfbe391e4aef8b0ce486e529 297 SUPERFAMILY SSF103481 39 137 2.75E-15 T 29-03-2018 AL539_RS21310 aa1ad287cfbe391e4aef8b0ce486e529 297 SUPERFAMILY SSF103481 187 283 2.48E-16 T 29-03-2018 AL539_RS21310 aa1ad287cfbe391e4aef8b0ce486e529 297 Pfam PF00892 EamA-like transporter family 150 281 4.4E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS21310 aa1ad287cfbe391e4aef8b0ce486e529 297 Pfam PF00892 EamA-like transporter family 9 136 3.5E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS15790 74958b2d3c9dbbb6bf02bc0e57249247 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 7.0E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS15790 74958b2d3c9dbbb6bf02bc0e57249247 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.8E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS00610 b2fa6b6ac74a3ba079211b531c67f7ea 1212 Pfam PF07916 TraG-like protein, N-terminal region 5 471 1.6E-93 T 29-03-2018 IPR012931 TraG-like, N-terminal AL539_RS08305 364b3aae2ae4b0d8effea1b16b815f5a 427 Pfam PF07670 Nucleoside recognition 99 195 6.9E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS08305 364b3aae2ae4b0d8effea1b16b815f5a 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 3.9E-154 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL539_RS08305 364b3aae2ae4b0d8effea1b16b815f5a 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 9.0E-74 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL539_RS08305 364b3aae2ae4b0d8effea1b16b815f5a 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.5E-27 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL539_RS06325 8cbe4bf464040b49b00174440a6a0adb 230 PIRSF PIRSF037290 1 230 1.9E-72 T 29-03-2018 IPR017166 Uncharacterised conserved protein UCP037290 AL539_RS06325 8cbe4bf464040b49b00174440a6a0adb 230 Pfam PF00154 recA bacterial DNA recombination protein 28 125 1.2E-5 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS06325 8cbe4bf464040b49b00174440a6a0adb 230 Gene3D G3DSA:3.40.50.300 46 160 1.5E-22 T 29-03-2018 AL539_RS06325 8cbe4bf464040b49b00174440a6a0adb 230 SUPERFAMILY SSF52540 56 158 7.79E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24480 44fbb581162ce8250e146b187dac9acd 276 SUPERFAMILY SSF52402 2 276 1.87E-79 T 29-03-2018 AL539_RS24480 44fbb581162ce8250e146b187dac9acd 276 Gene3D G3DSA:3.40.50.620 1 276 4.2E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS24480 44fbb581162ce8250e146b187dac9acd 276 Pfam PF02540 NAD synthase 21 270 1.0E-63 T 29-03-2018 IPR022310 NAD/GMP synthase AL539_RS24480 44fbb581162ce8250e146b187dac9acd 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 1.8E-65 T 29-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AL539_RS24480 44fbb581162ce8250e146b187dac9acd 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 15 274 31.449 T 29-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AL539_RS16470 c21e2ae6ceb847f75a2dbbf775bc5af1 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 4.3E-96 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS16470 c21e2ae6ceb847f75a2dbbf775bc5af1 437 SUPERFAMILY SSF117143 78 398 1.57E-69 T 29-03-2018 AL539_RS16470 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 1.7E-22 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AL539_RS16470 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 1.1E-15 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS16470 c21e2ae6ceb847f75a2dbbf775bc5af1 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL539_RS16470 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Pfam PF00460 Flagella basal body rod protein 3 32 7.3E-11 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS16470 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Gene3D G3DSA:2.60.98.20 154 319 6.4E-28 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AL539_RS03855 181a131f9b30f67a813ebadc9d5a8f3e 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.3E-26 T 29-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain AL539_RS03855 181a131f9b30f67a813ebadc9d5a8f3e 149 Gene3D G3DSA:1.10.1220.10 77 135 0.0027 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL539_RS03855 181a131f9b30f67a813ebadc9d5a8f3e 149 Pfam PF06303 MatP N-terminal domain 2 85 3.6E-42 T 29-03-2018 IPR035087 MatP, N-terminal AL539_RS03855 181a131f9b30f67a813ebadc9d5a8f3e 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.022 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL539_RS03855 181a131f9b30f67a813ebadc9d5a8f3e 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 5.0E-71 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL539_RS00595 c359dc4859e6c6351b6c27f852831534 180 Pfam PF01464 Transglycosylase SLT domain 29 150 1.1E-9 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS00595 c359dc4859e6c6351b6c27f852831534 180 SUPERFAMILY SSF53955 99 175 7.82E-18 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS00595 c359dc4859e6c6351b6c27f852831534 180 SUPERFAMILY SSF53955 28 52 7.82E-18 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS00595 c359dc4859e6c6351b6c27f852831534 180 Gene3D G3DSA:1.10.530.10 16 179 3.2E-15 T 29-03-2018 AL539_RS04485 7719eecc6806884af6d4bb71a099f5e2 143 SUPERFAMILY SSF69635 4 117 1.36E-26 T 29-03-2018 AL539_RS04485 7719eecc6806884af6d4bb71a099f5e2 143 Pfam PF05932 Tir chaperone protein (CesT) family 9 73 5.5E-7 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL539_RS04485 7719eecc6806884af6d4bb71a099f5e2 143 Gene3D G3DSA:3.30.1460.10 6 117 4.2E-17 T 29-03-2018 AL539_RS18825 9ff216dd2b857ee018aa5f93af5f329e 324 Gene3D G3DSA:3.60.10.10 8 324 7.2E-28 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS18825 9ff216dd2b857ee018aa5f93af5f329e 324 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 54 313 4.7E-7 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS18825 9ff216dd2b857ee018aa5f93af5f329e 324 SUPERFAMILY SSF56219 12 319 1.22E-28 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS19140 b67d16ee1c4a09b1e28a6b020abd6afe 128 Pfam PF01124 MAPEG family 3 118 3.6E-23 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AL539_RS19140 b67d16ee1c4a09b1e28a6b020abd6afe 128 SUPERFAMILY SSF161084 2 127 2.35E-29 T 29-03-2018 AL539_RS19140 b67d16ee1c4a09b1e28a6b020abd6afe 128 Gene3D G3DSA:1.20.120.550 1 123 3.0E-23 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AL539_RS17840 b1fed34b85f95763e95228acf4193f1a 353 SUPERFAMILY SSF142754 28 341 2.22E-105 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL539_RS17840 b1fed34b85f95763e95228acf4193f1a 353 Gene3D G3DSA:3.40.50.10800 115 209 1.2E-19 T 29-03-2018 AL539_RS17840 b1fed34b85f95763e95228acf4193f1a 353 Gene3D G3DSA:3.40.50.10800 20 110 1.4E-19 T 29-03-2018 AL539_RS17840 b1fed34b85f95763e95228acf4193f1a 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.188 T 29-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL539_RS17840 b1fed34b85f95763e95228acf4193f1a 353 Gene3D G3DSA:3.40.50.10800 210 323 2.5E-32 T 29-03-2018 AL539_RS17840 b1fed34b85f95763e95228acf4193f1a 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 4.0E-114 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL539_RS17840 b1fed34b85f95763e95228acf4193f1a 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 4.2E-101 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 Pfam PF13500 AAA domain 7 236 6.2E-23 T 29-03-2018 AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 SUPERFAMILY SSF52540 6 241 7.21E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 Gene3D G3DSA:3.40.50.300 4 243 2.4E-55 T 29-03-2018 AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 437 4.6E-58 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 480 2.8E-154 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 SUPERFAMILY SSF52317 255 446 3.97E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 Gene3D G3DSA:3.40.50.880 244 461 6.4E-22 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS18360 1207420738e4abc26b66900e7f8ffc11 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 197.098 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL539_RS09915 aaed83b2d9e91628cc80973259ea29be 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 1.0E-28 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL539_RS09915 aaed83b2d9e91628cc80973259ea29be 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.7E-27 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL539_RS09915 aaed83b2d9e91628cc80973259ea29be 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.6E-81 T 29-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 Pfam PF01235 Sodium:alanine symporter family 51 472 7.4E-150 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 7.9E-136 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.7E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.7E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 2.7E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.7E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 2.7E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.7E-57 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS15420 d0d4e600691986c99f70dfa65879a533 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL539_RS06545 b52f45460bf0ac3d99d1e64c632ec6f6 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 2.7E-43 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AL539_RS06545 b52f45460bf0ac3d99d1e64c632ec6f6 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.336 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB AL539_RS06545 b52f45460bf0ac3d99d1e64c632ec6f6 178 Gene3D G3DSA:1.20.1550.10 3 177 3.9E-51 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL539_RS06545 b52f45460bf0ac3d99d1e64c632ec6f6 178 SUPERFAMILY SSF158442 17 163 4.71E-44 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AL539_RS01765 b953cad04fbbbfa7613948297eb97496 263 Gene3D G3DSA:3.40.50.300 1 263 1.8E-63 T 29-03-2018 AL539_RS01765 b953cad04fbbbfa7613948297eb97496 263 Pfam PF00005 ABC transporter 30 178 4.0E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS01765 b953cad04fbbbfa7613948297eb97496 263 SUPERFAMILY SSF52540 3 253 1.06E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01765 b953cad04fbbbfa7613948297eb97496 263 SMART SM00382 38 227 5.3E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS01765 b953cad04fbbbfa7613948297eb97496 263 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS10190 85090077dc1c40733bae6c79c8c40bd0 219 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 6 219 1.7E-53 T 29-03-2018 IPR026387 Outer membrane protein AL539_RS10190 85090077dc1c40733bae6c79c8c40bd0 219 Pfam PF13505 Outer membrane protein beta-barrel domain 9 219 7.2E-8 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 Gene3D G3DSA:3.40.190.10 5 148 1.9E-37 T 29-03-2018 AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 251 6.5E-79 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 SMART SM00062 28 254 1.6E-66 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 SUPERFAMILY SSF53850 3 255 5.43E-70 T 29-03-2018 AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 252 2.1E-61 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 SMART SM00079 28 253 0.0031 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL539_RS17535 4ffe5d5ccd88a0a59f12a0f54b59cc30 258 Gene3D G3DSA:3.40.190.10 149 258 2.7E-17 T 29-03-2018 AL539_RS25150 6c6f58c018ab562f9c976caba7929b17 528 SUPERFAMILY SSF90123 19 310 4.19E-33 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS25150 6c6f58c018ab562f9c976caba7929b17 528 Gene3D G3DSA:1.20.1560.10 16 318 2.7E-19 T 29-03-2018 AL539_RS25150 6c6f58c018ab562f9c976caba7929b17 528 SMART SM00382 341 520 9.9E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS25150 6c6f58c018ab562f9c976caba7929b17 528 Pfam PF00005 ABC transporter 337 478 3.4E-10 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS25150 6c6f58c018ab562f9c976caba7929b17 528 Gene3D G3DSA:3.40.50.300 319 523 1.3E-17 T 29-03-2018 AL539_RS25150 6c6f58c018ab562f9c976caba7929b17 528 Pfam PF00664 ABC transporter transmembrane region 16 282 1.7E-9 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS25150 6c6f58c018ab562f9c976caba7929b17 528 SUPERFAMILY SSF52540 319 516 3.3E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS04090 48be9620e3f2da96194f9e9f9a671a6a 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 3.9E-121 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL539_RS04090 48be9620e3f2da96194f9e9f9a671a6a 436 Gene3D G3DSA:1.20.1600.10 20 426 6.5E-70 T 29-03-2018 AL539_RS04090 48be9620e3f2da96194f9e9f9a671a6a 436 SUPERFAMILY SSF56954 23 430 1.83E-87 T 29-03-2018 AL539_RS04090 48be9620e3f2da96194f9e9f9a671a6a 436 Pfam PF02321 Outer membrane efflux protein 233 416 4.6E-30 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS04090 48be9620e3f2da96194f9e9f9a671a6a 436 Pfam PF02321 Outer membrane efflux protein 24 210 6.5E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS08845 4ab2decbc77391936a3e5def56f157fa 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.3E-20 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL539_RS08845 4ab2decbc77391936a3e5def56f157fa 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.276 T 29-03-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL539_RS08845 4ab2decbc77391936a3e5def56f157fa 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.8E-19 T 29-03-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AL539_RS05805 5c5db81ff161fc287da2d17b6cef63d3 200 Gene3D G3DSA:3.90.10.10 142 199 8.0E-7 T 29-03-2018 AL539_RS05805 5c5db81ff161fc287da2d17b6cef63d3 200 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 188 1.0E-4 T 29-03-2018 IPR010177 Doubled CXXCH motif AL539_RS05805 5c5db81ff161fc287da2d17b6cef63d3 200 Gene3D G3DSA:3.90.10.10 24 141 5.5E-9 T 29-03-2018 AL539_RS05805 5c5db81ff161fc287da2d17b6cef63d3 200 SUPERFAMILY SSF48695 8 187 8.09E-26 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS05805 5c5db81ff161fc287da2d17b6cef63d3 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 2.3E-62 T 29-03-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 Gene3D G3DSA:2.40.110.10 128 224 1.5E-39 T 29-03-2018 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 SUPERFAMILY SSF47203 234 386 1.05E-47 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 Gene3D G3DSA:1.10.540.10 1 127 1.5E-38 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 Gene3D G3DSA:1.20.140.10 225 389 1.9E-56 T 29-03-2018 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 9.0E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 PIRSF PIRSF016578 15 102 0.57 T 29-03-2018 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 PIRSF PIRSF016578 141 389 3.1E-10 T 29-03-2018 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 SUPERFAMILY SSF56645 6 249 2.36E-83 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.1E-24 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL539_RS25710 5164d8e5d889262b9686646b931f2442 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 124 5.2E-35 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.077 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 29-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 Gene3D G3DSA:3.30.540.10 9 202 5.4E-65 T 29-03-2018 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 SUPERFAMILY SSF56655 3 331 1.83E-114 T 29-03-2018 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 29-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 Gene3D G3DSA:3.40.190.80 203 334 3.8E-59 T 29-03-2018 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 6.3E-75 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 6.3E-75 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 6.3E-75 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 6.3E-75 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 6.3E-75 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 6.3E-75 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PIRSF PIRSF000904 2 337 8.1E-126 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS13835 e1c1990ca510a32b8949e6d8d90a081a 338 PIRSF PIRSF500210 1 336 9.4E-129 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL539_RS10200 56232b08046c221cabae3b053a43a6c2 326 PIRSF PIRSF006621 1 323 2.1E-75 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS10200 56232b08046c221cabae3b053a43a6c2 326 SUPERFAMILY SSF51395 6 319 7.69E-75 T 29-03-2018 AL539_RS10200 56232b08046c221cabae3b053a43a6c2 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 1.6E-161 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL539_RS10200 56232b08046c221cabae3b053a43a6c2 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 315 1.2E-96 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS10200 56232b08046c221cabae3b053a43a6c2 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.548 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL539_RS10200 56232b08046c221cabae3b053a43a6c2 326 Gene3D G3DSA:3.20.20.70 3 244 1.5E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS10200 56232b08046c221cabae3b053a43a6c2 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS18295 13ea62c03c69f39e101c7459c06002df 96 Gene3D G3DSA:1.10.10.10 2 91 3.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18295 13ea62c03c69f39e101c7459c06002df 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 3.7E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS18295 13ea62c03c69f39e101c7459c06002df 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.7E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS18295 13ea62c03c69f39e101c7459c06002df 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 3.7E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS18295 13ea62c03c69f39e101c7459c06002df 96 SUPERFAMILY SSF46785 9 95 2.25E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18295 13ea62c03c69f39e101c7459c06002df 96 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 2.8E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS18295 13ea62c03c69f39e101c7459c06002df 96 SMART SM00418 14 95 2.6E-17 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS00070 9c05be8d24eefed787f0842e9e409332 449 Gene3D G3DSA:1.20.120.330 43 288 4.3E-7 T 29-03-2018 AL539_RS00070 9c05be8d24eefed787f0842e9e409332 449 Pfam PF03743 Bacterial conjugation TrbI-like protein 238 439 3.4E-35 T 29-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.0E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.0E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.0E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 Pfam PF09278 MerR, DNA binding 45 109 1.3E-17 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 Gene3D G3DSA:1.10.1660.10 58 132 1.6E-12 T 29-03-2018 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 SUPERFAMILY SSF46955 4 124 1.5E-28 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 Gene3D G3DSA:1.10.1660.10 1 57 1.5E-19 T 29-03-2018 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 140 1.8E-67 T 29-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS21165 ac6e20ce8bc500701f9042a0fc0436dd 144 SMART SM00422 3 71 5.9E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS13730 efa9a7ec6a5005ea2e7a0f9b587781b9 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 6.2E-10 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AL539_RS13730 efa9a7ec6a5005ea2e7a0f9b587781b9 419 Pfam PF02687 FtsX-like permease family 317 410 6.0E-11 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS24570 c521ab4d4dba14eab1a14bb978304267 178 SUPERFAMILY SSF89028 7 169 1.1E-36 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL539_RS24570 c521ab4d4dba14eab1a14bb978304267 178 Gene3D G3DSA:1.20.1200.10 16 174 1.4E-24 T 29-03-2018 AL539_RS24570 c521ab4d4dba14eab1a14bb978304267 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 5.5E-16 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL539_RS24570 c521ab4d4dba14eab1a14bb978304267 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 3.0E-60 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 PIRSF PIRSF003101 1 420 2.5E-147 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 SUPERFAMILY SSF53067 8 221 7.25E-60 T 29-03-2018 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.25 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.90.640.10 243 286 2.7E-20 T 29-03-2018 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.30.420.40 1 187 5.8E-34 T 29-03-2018 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.3E-151 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.30.420.40 197 242 1.4E-4 T 29-03-2018 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Pfam PF14450 Cell division protein FtsA 11 182 1.1E-7 T 29-03-2018 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Pfam PF14450 Cell division protein FtsA 207 381 6.1E-24 T 29-03-2018 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 SMART SM00842 10 196 4.3E-95 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.30.420.40 287 387 0.011 T 29-03-2018 AL539_RS14595 24c5c831e9f73961221c871c669bf461 420 SUPERFAMILY SSF53067 198 384 2.52E-45 T 29-03-2018 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 254 3.0E-85 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 7.3E-19 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.3E-19 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.3E-19 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 SUPERFAMILY SSF56601 1 275 1.09E-82 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 Gene3D G3DSA:2.60.410.10 276 365 6.8E-19 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 365 7.7E-22 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 SUPERFAMILY SSF69189 275 367 6.87E-23 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 Gene3D G3DSA:3.40.710.10 22 275 5.5E-54 T 29-03-2018 AL539_RS23435 877b4dac752c31e2240d4a0c91c3327f 385 SMART SM00936 275 365 1.5E-27 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS24375 640d50ead8231bba11a88c04e3517ade 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.5E-67 T 29-03-2018 IPR003362 Bacterial sugar transferase AL539_RS24375 640d50ead8231bba11a88c04e3517ade 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 466 9.6E-153 T 29-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL539_RS24375 640d50ead8231bba11a88c04e3517ade 466 SUPERFAMILY SSF51735 143 270 1.42E-5 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS24375 640d50ead8231bba11a88c04e3517ade 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 466 3.3E-171 T 29-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AL539_RS24375 640d50ead8231bba11a88c04e3517ade 466 Pfam PF13727 CoA-binding domain 66 240 2.3E-37 T 29-03-2018 AL539_RS24375 640d50ead8231bba11a88c04e3517ade 466 Gene3D G3DSA:3.40.50.720 140 265 6.3E-14 T 29-03-2018 AL539_RS25085 c67cace695ed39beb275a03a085f0916 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site AL539_RS25085 c67cace695ed39beb275a03a085f0916 299 Pfam PF01040 UbiA prenyltransferase family 32 277 1.2E-64 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL539_RS25085 c67cace695ed39beb275a03a085f0916 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 5.5E-100 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL539_RS25085 c67cace695ed39beb275a03a085f0916 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.544 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL539_RS23205 fd908f9e9191c56494884f49daec6c72 125 Gene3D G3DSA:2.60.40.10 16 124 1.1E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS04130 54e810284f1be5135032a6d9edec9833 301 SUPERFAMILY SSF51679 41 301 1.13E-46 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL539_RS04130 54e810284f1be5135032a6d9edec9833 301 Pfam PF00296 Luciferase-like monooxygenase 32 224 2.6E-29 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AL539_RS04130 54e810284f1be5135032a6d9edec9833 301 Gene3D G3DSA:3.20.20.30 37 301 3.0E-39 T 29-03-2018 AL539_RS04130 54e810284f1be5135032a6d9edec9833 301 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 6 300 1.7E-96 T 29-03-2018 IPR020020 Luciferase-type oxidoreductase AL539_RS17445 a8a897678557bf92acd1c7062315d458 751 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 3.6E-27 T 29-03-2018 IPR004477 ComEC/Rec2-related protein AL539_RS17445 a8a897678557bf92acd1c7062315d458 751 Pfam PF00753 Metallo-beta-lactamase superfamily 503 684 6.1E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS17445 a8a897678557bf92acd1c7062315d458 751 SUPERFAMILY SSF56281 494 736 1.16E-41 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS17445 a8a897678557bf92acd1c7062315d458 751 SMART SM00849 505 688 8.1E-8 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS17445 a8a897678557bf92acd1c7062315d458 751 Pfam PF03772 Competence protein 208 465 1.0E-55 T 29-03-2018 IPR004477 ComEC/Rec2-related protein AL539_RS17445 a8a897678557bf92acd1c7062315d458 751 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 132 716 3.2E-118 T 29-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AL539_RS17445 a8a897678557bf92acd1c7062315d458 751 Gene3D G3DSA:3.60.15.10 495 733 1.8E-21 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS12700 9d861af659b0017fa4f04a040ca01950 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 258 8.5E-103 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL539_RS12700 9d861af659b0017fa4f04a040ca01950 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL539_RS12700 9d861af659b0017fa4f04a040ca01950 259 Gene3D G3DSA:3.40.50.150 2 258 1.0E-48 T 29-03-2018 AL539_RS12700 9d861af659b0017fa4f04a040ca01950 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 6.4E-83 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL539_RS12700 9d861af659b0017fa4f04a040ca01950 259 SUPERFAMILY SSF53335 27 257 4.34E-53 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS12700 9d861af659b0017fa4f04a040ca01950 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.482 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL539_RS12700 9d861af659b0017fa4f04a040ca01950 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL539_RS21325 02ad3281dcbb87915c07d281ff3ce2bb 351 SUPERFAMILY SSF51412 10 330 1.47E-60 T 29-03-2018 AL539_RS21325 02ad3281dcbb87915c07d281ff3ce2bb 351 Gene3D G3DSA:3.20.20.70 5 349 8.6E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS21325 02ad3281dcbb87915c07d281ff3ce2bb 351 Pfam PF03060 Nitronate monooxygenase 8 346 2.0E-70 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AL539_RS25260 4953936b7bbc9c793b26bc2649e5f05e 102 Pfam PF14375 Cysteine-rich CWC 53 97 2.0E-6 T 29-03-2018 IPR032720 Cysteine-rich CWC AL539_RS25260 4953936b7bbc9c793b26bc2649e5f05e 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 3.2E-15 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 AL539_RS18450 b805b11cc7d46c4d8b86992d76f88f65 53 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 17.448 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 AL539_RS18450 b805b11cc7d46c4d8b86992d76f88f65 53 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 6.0E-18 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 AL539_RS18450 b805b11cc7d46c4d8b86992d76f88f65 53 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 4.1E-25 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 AL539_RS24705 516c6404a162f5f55b769e2ade1a9035 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 6.3E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS24705 516c6404a162f5f55b769e2ade1a9035 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 6.3E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS24705 516c6404a162f5f55b769e2ade1a9035 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.3E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS24705 516c6404a162f5f55b769e2ade1a9035 97 SUPERFAMILY SSF46785 1 93 4.71E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24705 516c6404a162f5f55b769e2ade1a9035 97 Pfam PF12840 Helix-turn-helix domain 8 69 2.6E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24705 516c6404a162f5f55b769e2ade1a9035 97 Gene3D G3DSA:1.10.10.10 1 83 3.9E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24705 516c6404a162f5f55b769e2ade1a9035 97 SMART SM00418 8 88 1.5E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Pfam PF01464 Transglycosylase SLT domain 126 227 2.3E-22 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 134 162 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 SUPERFAMILY SSF54106 473 520 3.27E-10 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Gene3D G3DSA:3.10.350.10 265 336 0.35 T 29-03-2018 AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Pfam PF01476 LysM domain 419 462 1.6E-12 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Pfam PF01476 LysM domain 476 518 1.5E-10 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Pfam PF01476 LysM domain 345 387 5.0E-13 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 SMART SM00257 475 519 4.5E-10 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 SMART SM00257 418 462 6.3E-13 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 SMART SM00257 344 387 4.5E-15 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Gene3D G3DSA:1.10.530.10 16 259 5.4E-35 T 29-03-2018 AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 SUPERFAMILY SSF54106 417 462 3.92E-11 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Gene3D G3DSA:3.10.350.10 340 402 5.4E-14 T 29-03-2018 AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 SUPERFAMILY SSF54106 344 387 5.62E-11 T 29-03-2018 IPR018392 LysM domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 SUPERFAMILY SSF53955 113 271 2.39E-41 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Gene3D G3DSA:3.10.350.10 471 524 5.5E-12 T 29-03-2018 AL539_RS07655 dafe19bae4033679dcba9d9c50810b77 527 Gene3D G3DSA:3.10.350.10 414 467 1.3E-15 T 29-03-2018 AL539_RS24095 1fdda47fc2988c1222e0e371f7714d56 287 Gene3D G3DSA:1.10.3720.10 6 281 5.3E-44 T 29-03-2018 AL539_RS24095 1fdda47fc2988c1222e0e371f7714d56 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.2E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24095 1fdda47fc2988c1222e0e371f7714d56 287 SUPERFAMILY SSF161098 22 274 1.59E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24095 1fdda47fc2988c1222e0e371f7714d56 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 1.3E-99 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL539_RS25640 b8fae825b58b68faa7c5c2e04abcbc16 419 Pfam PF04225 Opacity-associated protein A LysM-like domain 69 150 5.3E-7 T 29-03-2018 IPR007340 Opacity-associated protein A AL539_RS25640 b8fae825b58b68faa7c5c2e04abcbc16 419 Pfam PF01551 Peptidase family M23 291 384 6.2E-31 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS25640 b8fae825b58b68faa7c5c2e04abcbc16 419 SUPERFAMILY SSF51261 138 386 1.52E-64 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS25640 b8fae825b58b68faa7c5c2e04abcbc16 419 Gene3D G3DSA:2.70.70.10 260 391 3.1E-41 T 29-03-2018 AL539_RS25640 b8fae825b58b68faa7c5c2e04abcbc16 419 Gene3D G3DSA:3.10.350.10 64 121 2.4E-4 T 29-03-2018 AL539_RS23000 ed157e0b929e55bc5552a9ce01a2f091 148 SUPERFAMILY SSF103247 24 146 6.54E-35 T 29-03-2018 IPR005180 Domain of unknown function DUF302 AL539_RS23000 ed157e0b929e55bc5552a9ce01a2f091 148 Gene3D G3DSA:3.30.310.70 19 147 7.6E-31 T 29-03-2018 IPR005180 Domain of unknown function DUF302 AL539_RS23000 ed157e0b929e55bc5552a9ce01a2f091 148 Pfam PF03625 Domain of unknown function DUF302 54 116 3.2E-20 T 29-03-2018 IPR005180 Domain of unknown function DUF302 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 SMART SM00388 386 455 4.9E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 SMART SM00387 497 610 2.6E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 SUPERFAMILY SSF55874 444 608 2.23E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 608 2.0E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 451 5.4E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 Gene3D G3DSA:3.40.190.10 136 243 6.6E-14 T 29-03-2018 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 SUPERFAMILY SSF53850 64 291 1.13E-18 T 29-03-2018 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 SUPERFAMILY SSF47384 379 451 8.24E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 Gene3D G3DSA:1.10.287.130 367 451 1.2E-7 T 29-03-2018 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 588 3.6E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 558 3.6E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 61 295 2.0E-35 T 29-03-2018 AL539_RS06225 810db8a387fcd5305dbef65f1751308e 610 Gene3D G3DSA:3.30.565.10 455 610 4.9E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 7.0E-156 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.4E-6 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.4E-6 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.4E-6 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 Gene3D G3DSA:3.40.50.880 5 212 6.8E-50 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.388 T 29-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 3.8E-43 T 29-03-2018 IPR017926 Glutamine amidotransferase AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.8E-83 T 29-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 Pfam PF02540 NAD synthase 212 285 1.0E-7 T 29-03-2018 IPR022310 NAD/GMP synthase AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 Gene3D G3DSA:3.30.300.10 393 517 1.3E-52 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 SUPERFAMILY SSF52402 189 412 6.84E-58 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 Gene3D G3DSA:3.40.50.620 213 392 1.4E-34 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.5E-6 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.5E-6 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.5E-6 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 SUPERFAMILY SSF52317 5 196 3.32E-57 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 3.8E-7 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.8E-7 T 29-03-2018 AL539_RS15400 e0581aa466d4114c13f24fe62d33befc 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 3.8E-7 T 29-03-2018 AL539_RS23775 52810c66efca7ccba0665bfa3b5a36d4 129 Gene3D G3DSA:1.20.120.10 24 118 3.7E-13 T 29-03-2018 AL539_RS23775 52810c66efca7ccba0665bfa3b5a36d4 129 Pfam PF07361 Cytochrome b562 24 119 3.4E-30 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AL539_RS23775 52810c66efca7ccba0665bfa3b5a36d4 129 SUPERFAMILY SSF47175 24 119 1.41E-30 T 29-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AL539_RS19945 f10225490e543fbe0e7ff52e080f2111 497 SMART SM00240 29 80 5.4E-8 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL539_RS19945 f10225490e543fbe0e7ff52e080f2111 497 SUPERFAMILY SSF49879 21 106 1.57E-24 T 29-03-2018 IPR008984 SMAD/FHA domain GO:0005515 AL539_RS19945 f10225490e543fbe0e7ff52e080f2111 497 Gene3D G3DSA:2.60.200.20 4 111 2.5E-22 T 29-03-2018 AL539_RS19945 f10225490e543fbe0e7ff52e080f2111 497 Pfam PF00498 FHA domain 31 97 9.9E-17 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL539_RS18625 db514767a5c34329eb1d8dbefb882332 262 Gene3D G3DSA:3.30.2010.10 46 144 4.0E-25 T 29-03-2018 AL539_RS18625 db514767a5c34329eb1d8dbefb882332 262 Pfam PF01435 Peptidase family M48 60 246 2.9E-46 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 Gene3D G3DSA:1.10.3860.10 2 411 3.7E-116 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 7.9E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 SUPERFAMILY SSF118215 15 403 3.79E-110 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS06010 e6e265d7ab710fe70c6893613f9cede8 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.2E-118 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS18445 9b123dd7b44a918fc9a4792b2a58b5a6 373 Gene3D G3DSA:2.40.160.60 21 365 5.3E-30 T 29-03-2018 AL539_RS18445 9b123dd7b44a918fc9a4792b2a58b5a6 373 SUPERFAMILY SSF56925 217 342 1.22E-5 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS18445 9b123dd7b44a918fc9a4792b2a58b5a6 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 289 1.6E-65 T 29-03-2018 IPR032811 Putative conjugal transfer protein TraF-related AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 Gene3D G3DSA:3.40.50.1370 148 308 4.9E-51 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 SUPERFAMILY SSF53671 4 307 8.12E-102 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.2E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.2E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.2E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.2E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.827 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 Gene3D G3DSA:3.40.50.1370 1 147 2.8E-50 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.4E-33 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.9E-116 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.1E-44 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.7E-37 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.7E-37 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.7E-37 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.7E-37 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.7E-37 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS09860 116ce44c214c00b70864d6c4b4ab6776 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.7E-37 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS24820 0174748d72ba845bb9029638f6aad65c 366 Gene3D G3DSA:3.40.1710.10 41 186 1.2E-17 T 29-03-2018 AL539_RS24820 0174748d72ba845bb9029638f6aad65c 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 1.3E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS24820 0174748d72ba845bb9029638f6aad65c 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 1.3E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS24820 0174748d72ba845bb9029638f6aad65c 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 1.3E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS24820 0174748d72ba845bb9029638f6aad65c 366 Pfam PF12698 ABC-2 family transporter protein 25 357 1.1E-44 T 29-03-2018 AL539_RS12690 b6d3b43245a6e063d42bb8926a469f88 301 Pfam PF00892 EamA-like transporter family 9 141 9.2E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS12690 b6d3b43245a6e063d42bb8926a469f88 301 Pfam PF00892 EamA-like transporter family 155 286 4.2E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS12690 b6d3b43245a6e063d42bb8926a469f88 301 SUPERFAMILY SSF103481 65 144 7.98E-11 T 29-03-2018 AL539_RS12690 b6d3b43245a6e063d42bb8926a469f88 301 SUPERFAMILY SSF103481 189 291 1.7E-9 T 29-03-2018 AL539_RS13590 ea556bcdd8ce79a533e221010cf20bb0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.682 T 29-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AL539_RS13590 ea556bcdd8ce79a533e221010cf20bb0 101 Gene3D G3DSA:4.10.830.10 1 101 2.4E-32 T 29-03-2018 AL539_RS13590 ea556bcdd8ce79a533e221010cf20bb0 101 SUPERFAMILY SSF57716 2 101 9.27E-37 T 29-03-2018 AL539_RS13590 ea556bcdd8ce79a533e221010cf20bb0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 29-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13590 ea556bcdd8ce79a533e221010cf20bb0 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 29-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS25825 790868c6fe2a6725c46248f917f326b9 331 Gene3D G3DSA:3.40.190.10 157 322 2.3E-28 T 29-03-2018 AL539_RS25825 790868c6fe2a6725c46248f917f326b9 331 Gene3D G3DSA:3.40.190.10 19 156 1.5E-17 T 29-03-2018 AL539_RS25825 790868c6fe2a6725c46248f917f326b9 331 SUPERFAMILY SSF53850 22 326 2.44E-64 T 29-03-2018 AL539_RS25825 790868c6fe2a6725c46248f917f326b9 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 303 8.7E-56 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AL539_RS09260 b0d69f8ab75ad6b939342e1090dcfd28 233 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 5.3E-36 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL539_RS09260 b0d69f8ab75ad6b939342e1090dcfd28 233 Gene3D G3DSA:3.20.20.10 1 233 9.2E-72 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS09260 b0d69f8ab75ad6b939342e1090dcfd28 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 4.8E-89 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL539_RS09260 b0d69f8ab75ad6b939342e1090dcfd28 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL539_RS09260 b0d69f8ab75ad6b939342e1090dcfd28 233 PIRSF PIRSF004848 1 233 9.8E-79 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AL539_RS09260 b0d69f8ab75ad6b939342e1090dcfd28 233 SUPERFAMILY SSF51419 1 228 2.88E-82 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 Gene3D G3DSA:3.40.630.10 242 389 7.0E-18 T 29-03-2018 AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 Gene3D G3DSA:3.40.630.10 2 223 9.7E-40 T 29-03-2018 AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 SUPERFAMILY SSF53187 301 388 2.28E-79 T 29-03-2018 AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 SUPERFAMILY SSF53187 2 199 2.28E-79 T 29-03-2018 AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 SUPERFAMILY SSF55031 185 293 7.07E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 379 4.1E-99 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 PIRSF PIRSF005962 1 390 1.2E-120 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 Pfam PF07687 Peptidase dimerisation domain 190 284 1.3E-12 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS10560 ec0755d805d5e1799da7a810a581fc27 390 Pfam PF01546 Peptidase family M20/M25/M40 75 388 8.0E-30 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL539_RS20095 6327035d3b19c170fc76767e101f4a9a 100 SUPERFAMILY SSF52794 2 94 1.43E-33 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS20095 6327035d3b19c170fc76767e101f4a9a 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.4E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS20095 6327035d3b19c170fc76767e101f4a9a 100 Gene3D G3DSA:3.40.50.2300 2 99 1.6E-37 T 29-03-2018 AL539_RS20095 6327035d3b19c170fc76767e101f4a9a 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 1.1E-31 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AL539_RS11980 d6a12823d01218b3ec607f20ff7f52c8 161 SMART SM01001 1 152 4.1E-104 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL539_RS11980 d6a12823d01218b3ec607f20ff7f52c8 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 2.4E-67 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL539_RS11980 d6a12823d01218b3ec607f20ff7f52c8 161 Pfam PF00731 AIR carboxylase 2 150 5.7E-65 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL539_RS11980 d6a12823d01218b3ec607f20ff7f52c8 161 PIRSF PIRSF001338 1 160 2.5E-68 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AL539_RS11980 d6a12823d01218b3ec607f20ff7f52c8 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.534 T 29-03-2018 IPR033747 Class I PurE AL539_RS11980 d6a12823d01218b3ec607f20ff7f52c8 161 SUPERFAMILY SSF52255 2 158 8.76E-67 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL539_RS11980 d6a12823d01218b3ec607f20ff7f52c8 161 Gene3D G3DSA:3.40.50.7700 1 161 3.3E-66 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 Gene3D G3DSA:1.10.150.240 32 83 2.2E-18 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.1E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 Gene3D G3DSA:3.40.50.1000 84 227 9.3E-37 T 29-03-2018 IPR023214 HAD-like domain AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 5.0E-39 T 29-03-2018 IPR023214 HAD-like domain AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 Gene3D G3DSA:3.40.50.1000 1 31 0.0055 T 29-03-2018 IPR023214 HAD-like domain AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 194 5.3E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 2.8E-60 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 SUPERFAMILY SSF56784 5 224 5.82E-60 T 29-03-2018 IPR023214 HAD-like domain AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 34.966 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 82 193 6.3E-15 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 1.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS10590 513fafa057442a00cc628ef46d3f1c50 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.3E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS24600 0ad5a69c789a88844c0eac818793a43c 504 Gene3D G3DSA:3.10.105.10 285 475 1.1E-30 T 29-03-2018 AL539_RS24600 0ad5a69c789a88844c0eac818793a43c 504 PIRSF PIRSF002741 3 498 3.5E-59 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS24600 0ad5a69c789a88844c0eac818793a43c 504 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL539_RS24600 0ad5a69c789a88844c0eac818793a43c 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 425 1.2E-57 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS24600 0ad5a69c789a88844c0eac818793a43c 504 SUPERFAMILY SSF53850 34 491 4.71E-89 T 29-03-2018 AL539_RS24600 0ad5a69c789a88844c0eac818793a43c 504 Gene3D G3DSA:3.40.190.10 156 284 5.6E-26 T 29-03-2018 AL539_RS24600 0ad5a69c789a88844c0eac818793a43c 504 Gene3D G3DSA:3.90.76.10 67 155 1.0E-18 T 29-03-2018 AL539_RS18175 c77ca467b52ea2af20d9a9f23d20a0a0 723 Gene3D G3DSA:2.170.130.10 17 157 6.6E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS18175 c77ca467b52ea2af20d9a9f23d20a0a0 723 Gene3D G3DSA:2.40.170.20 158 723 1.7E-43 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS18175 c77ca467b52ea2af20d9a9f23d20a0a0 723 Pfam PF00593 TonB dependent receptor 246 721 1.9E-30 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS18175 c77ca467b52ea2af20d9a9f23d20a0a0 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 154 1.1E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS18175 c77ca467b52ea2af20d9a9f23d20a0a0 723 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 722 5.2E-82 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS18175 c77ca467b52ea2af20d9a9f23d20a0a0 723 SUPERFAMILY SSF56935 38 427 2.31E-89 T 29-03-2018 AL539_RS18175 c77ca467b52ea2af20d9a9f23d20a0a0 723 SUPERFAMILY SSF56935 458 722 2.31E-89 T 29-03-2018 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 3.5E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 3.5E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 3.5E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 Pfam PF08448 PAS fold 13 124 6.3E-27 T 29-03-2018 IPR013656 PAS fold-4 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 Gene3D G3DSA:3.30.450.20 9 120 4.4E-13 T 29-03-2018 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 SUPERFAMILY SSF46894 148 218 2.58E-13 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 SUPERFAMILY SSF55785 12 123 1.68E-14 T 29-03-2018 IPR000014 PAS domain AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 6.0E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 123 9.1E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 Gene3D G3DSA:1.10.10.10 121 221 5.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22790 d9051cc783cabc7b1238c69f35902723 239 SMART SM00421 156 213 4.5E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS08605 d5b217bf36a066d66c99fb0dee928f54 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.111 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL539_RS08605 d5b217bf36a066d66c99fb0dee928f54 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 2 120 3.4E-40 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL539_RS08605 d5b217bf36a066d66c99fb0dee928f54 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 9.0E-60 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL539_RS08605 d5b217bf36a066d66c99fb0dee928f54 122 PIRSF PIRSF006287 1 122 1.9E-47 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 AL539_RS15715 88f77c144bfda689444925dc6a47057e 147 SUPERFAMILY SSF55961 1 143 6.14E-34 T 29-03-2018 AL539_RS15715 88f77c144bfda689444925dc6a47057e 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 6.9E-31 T 29-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AL539_RS15715 88f77c144bfda689444925dc6a47057e 147 Gene3D G3DSA:3.30.530.20 1 144 1.7E-29 T 29-03-2018 IPR023393 START-like domain AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.9E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.9E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.9E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.9E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.9E-34 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02080 TrkA-C domain 390 451 1.5E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF51735 1 151 3.04E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.40.50.720 233 367 9.0E-25 T 29-03-2018 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02254 TrkA-N domain 3 123 2.7E-29 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02254 TrkA-N domain 235 350 5.6E-25 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.30.70.1450 368 458 1.6E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.30.70.1450 140 232 4.0E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.40.50.720 2 139 2.9E-26 T 29-03-2018 AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF51735 232 376 3.73E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS12025 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF116726 367 437 2.88E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS11540 eeef82b855ecb6e5739b3a79670ab232 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 3.5E-68 T 29-03-2018 IPR023214 HAD-like domain AL539_RS11540 eeef82b855ecb6e5739b3a79670ab232 274 SUPERFAMILY SSF56784 11 273 1.04E-67 T 29-03-2018 IPR023214 HAD-like domain AL539_RS11540 eeef82b855ecb6e5739b3a79670ab232 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 1.7E-34 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL539_RS11540 eeef82b855ecb6e5739b3a79670ab232 274 Gene3D G3DSA:3.40.50.1000 3 274 8.8E-40 T 29-03-2018 IPR023214 HAD-like domain AL539_RS11540 eeef82b855ecb6e5739b3a79670ab232 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 1.5E-60 T 29-03-2018 IPR000150 Cof family GO:0016787 AL539_RS11540 eeef82b855ecb6e5739b3a79670ab232 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 29-03-2018 AL539_RS11540 eeef82b855ecb6e5739b3a79670ab232 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 29-03-2018 AL539_RS16090 0634c9ed4f71cdf6755d4b823a5d6b87 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 9.2E-78 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL539_RS16090 0634c9ed4f71cdf6755d4b823a5d6b87 638 SUPERFAMILY SSF56519 58 254 1.83E-55 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL539_RS16090 0634c9ed4f71cdf6755d4b823a5d6b87 638 SUPERFAMILY SSF56601 256 619 3.09E-97 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS16090 0634c9ed4f71cdf6755d4b823a5d6b87 638 Gene3D G3DSA:3.90.1310.10 35 251 1.3E-54 T 29-03-2018 AL539_RS16090 0634c9ed4f71cdf6755d4b823a5d6b87 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 3.3E-51 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL539_RS16090 0634c9ed4f71cdf6755d4b823a5d6b87 638 Gene3D G3DSA:3.40.710.10 252 625 5.0E-85 T 29-03-2018 AL539_RS16090 0634c9ed4f71cdf6755d4b823a5d6b87 638 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.5E-241 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 AL539_RS09980 54bbb0ac14a6de8c8e02f461b6492b91 320 Gene3D G3DSA:3.40.50.720 5 115 3.7E-26 T 29-03-2018 AL539_RS09980 54bbb0ac14a6de8c8e02f461b6492b91 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 2.2E-54 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL539_RS09980 54bbb0ac14a6de8c8e02f461b6492b91 320 SUPERFAMILY SSF52283 4 139 1.89E-31 T 29-03-2018 AL539_RS09980 54bbb0ac14a6de8c8e02f461b6492b91 320 Gene3D G3DSA:3.40.50.720 116 292 1.3E-49 T 29-03-2018 AL539_RS09980 54bbb0ac14a6de8c8e02f461b6492b91 320 SUPERFAMILY SSF51735 103 290 8.88E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS09980 54bbb0ac14a6de8c8e02f461b6492b91 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_RS09980 54bbb0ac14a6de8c8e02f461b6492b91 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 320 4.9E-23 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 1.2E-103 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 Pfam PF00889 Elongation factor TS 71 261 1.1E-61 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 SUPERFAMILY SSF54713 142 280 1.7E-46 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 77.559 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 Gene3D G3DSA:3.30.479.20 58 146 3.3E-14 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 29-03-2018 IPR009060 UBA-like GO:0005515 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 Gene3D G3DSA:3.30.479.20 147 278 8.2E-42 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 SUPERFAMILY SSF54713 56 138 1.18E-18 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS07760 ab707560c26b40ef16c6b660894061bf 281 Gene3D G3DSA:1.10.8.10 1 56 3.7E-22 T 29-03-2018 AL539_RS04260 a4c9c7625dfd4aef98a48f39dc05c0cc 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.8E-66 T 29-03-2018 IPR023214 HAD-like domain AL539_RS04260 a4c9c7625dfd4aef98a48f39dc05c0cc 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 29-03-2018 AL539_RS04260 a4c9c7625dfd4aef98a48f39dc05c0cc 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 AL539_RS04260 a4c9c7625dfd4aef98a48f39dc05c0cc 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 8.5E-62 T 29-03-2018 IPR000150 Cof family GO:0016787 AL539_RS04260 a4c9c7625dfd4aef98a48f39dc05c0cc 269 SUPERFAMILY SSF56784 1 267 9.55E-76 T 29-03-2018 IPR023214 HAD-like domain AL539_RS04260 a4c9c7625dfd4aef98a48f39dc05c0cc 269 Gene3D G3DSA:3.40.50.1000 1 269 2.6E-47 T 29-03-2018 IPR023214 HAD-like domain AL539_RS04260 a4c9c7625dfd4aef98a48f39dc05c0cc 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 1.4E-26 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88946 115 453 8.77E-96 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 5.3E-37 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.83 T 29-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88659 516 618 1.74E-25 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.10.10 456 506 6.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04546 Sigma-70, non-essential region 139 355 3.5E-67 T 29-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.601.10 115 455 1.3E-103 T 29-03-2018 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.601.10 5 114 1.9E-14 T 29-03-2018 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.0E-120 T 29-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.10.10 550 619 9.0E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 7.0E-29 T 29-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS14295 a0a76e8cca4202e861af73badde5e5a7 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS01650 e21b39b1d5884dee583d282e80456c34 257 SUPERFAMILY SSF51366 1 256 1.57E-74 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL539_RS01650 e21b39b1d5884dee583d282e80456c34 257 Gene3D G3DSA:3.20.20.70 4 252 3.2E-58 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS01650 e21b39b1d5884dee583d282e80456c34 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.92 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL539_RS01650 e21b39b1d5884dee583d282e80456c34 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.3E-79 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AL539_RS01650 e21b39b1d5884dee583d282e80456c34 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 8.6E-115 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 SUPERFAMILY SSF56601 51 457 2.26E-83 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 Gene3D G3DSA:3.40.710.10 19 467 1.6E-30 T 29-03-2018 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 7.8E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 7.8E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 7.8E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 7.8E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 7.8E-28 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 436 6.3E-98 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS08475 307380ebbb77ce0c4af98d8ad8fdf28a 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 53 435 3.2E-97 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 SUPERFAMILY SSF53850 88 293 3.08E-23 T 29-03-2018 AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 Pfam PF03466 LysR substrate binding domain 87 293 1.5E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 SUPERFAMILY SSF46785 2 82 5.75E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 Gene3D G3DSA:1.10.10.10 4 85 6.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 Gene3D G3DSA:3.40.190.10 86 168 1.7E-7 T 29-03-2018 AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 Gene3D G3DSA:3.40.190.10 169 263 3.9E-11 T 29-03-2018 AL539_RS21265 81cd54444f4ae1abe0c749bb47836cef 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS01915 fa6ec8d2f5197b399dd4cd15cf59ff74 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.6E-18 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 AL539_RS23510 31acb591e43a771b4f8a8186729e0c75 548 Gene3D G3DSA:1.20.1600.10 22 499 1.2E-88 T 29-03-2018 AL539_RS23510 31acb591e43a771b4f8a8186729e0c75 548 Pfam PF02321 Outer membrane efflux protein 312 491 5.4E-22 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS23510 31acb591e43a771b4f8a8186729e0c75 548 Pfam PF02321 Outer membrane efflux protein 70 252 1.1E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS23510 31acb591e43a771b4f8a8186729e0c75 548 SUPERFAMILY SSF56954 292 496 1.02E-94 T 29-03-2018 AL539_RS23510 31acb591e43a771b4f8a8186729e0c75 548 SUPERFAMILY SSF56954 2 36 1.02E-94 T 29-03-2018 AL539_RS23510 31acb591e43a771b4f8a8186729e0c75 548 SUPERFAMILY SSF56954 61 263 1.02E-94 T 29-03-2018 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 Gene3D G3DSA:3.30.360.10 144 350 3.1E-61 T 29-03-2018 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.7E-22 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 5.8E-190 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 SUPERFAMILY SSF55347 133 354 8.26E-79 T 29-03-2018 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.876 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 SUPERFAMILY SSF51735 1 146 4.93E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 SMART SM00859 2 121 3.1E-23 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 Gene3D G3DSA:3.40.50.720 1 143 1.0E-18 T 29-03-2018 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.5E-58 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS06810 30bf74e56b04d7ac9f7fd76eba07143c 371 PIRSF PIRSF000148 1 371 1.1E-65 T 29-03-2018 AL539_RS24450 b1d8f2dd8c2a3872dc883999b685cdc0 306 SUPERFAMILY SSF53187 36 288 5.62E-39 T 29-03-2018 AL539_RS24450 b1d8f2dd8c2a3872dc883999b685cdc0 306 Gene3D G3DSA:3.40.630.10 16 303 5.5E-28 T 29-03-2018 AL539_RS24450 b1d8f2dd8c2a3872dc883999b685cdc0 306 Pfam PF00246 Zinc carboxypeptidase 74 146 4.0E-7 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 Gene3D G3DSA:2.160.10.10 1 196 2.2E-42 T 29-03-2018 AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 Gene3D G3DSA:1.20.1180.10 197 262 1.5E-20 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 PIRSF PIRSF000456 4 262 1.7E-95 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.8 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 2.8E-95 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.4E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 7.3E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS07705 5c364f1a860677f7619c53c97b0d1a53 262 SUPERFAMILY SSF51161 1 262 1.79E-73 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS20000 6aba80d05ba64b377ac5c0313c5c4bc6 666 Gene3D G3DSA:3.30.200.20 14 113 2.3E-4 T 29-03-2018 AL539_RS20000 6aba80d05ba64b377ac5c0313c5c4bc6 666 SMART SM00220 46 305 3.5E-12 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL539_RS20000 6aba80d05ba64b377ac5c0313c5c4bc6 666 Gene3D G3DSA:1.10.510.10 114 645 7.8E-32 T 29-03-2018 AL539_RS20000 6aba80d05ba64b377ac5c0313c5c4bc6 666 SUPERFAMILY SSF56112 43 273 6.47E-37 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS20000 6aba80d05ba64b377ac5c0313c5c4bc6 666 Pfam PF00069 Protein kinase domain 61 292 5.3E-29 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL539_RS20000 6aba80d05ba64b377ac5c0313c5c4bc6 666 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 29-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL539_RS21295 24857049f24655e41a3e9f8eee1a0a13 241 SUPERFAMILY SSF55811 16 159 6.58E-18 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS21295 24857049f24655e41a3e9f8eee1a0a13 241 Gene3D G3DSA:1.10.10.10 160 237 3.5E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21295 24857049f24655e41a3e9f8eee1a0a13 241 Gene3D G3DSA:3.90.79.10 2 159 6.8E-21 T 29-03-2018 AL539_RS21295 24857049f24655e41a3e9f8eee1a0a13 241 Pfam PF00293 NUDIX domain 19 148 1.8E-8 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 SUPERFAMILY SSF52172 2 177 1.99E-40 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 SUPERFAMILY SSF46689 346 444 1.72E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 Gene3D G3DSA:1.10.8.60 306 374 1.2E-20 T 29-03-2018 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 SMART SM00382 153 296 5.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 Pfam PF00158 Sigma-54 interaction domain 134 299 2.9E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 Gene3D G3DSA:1.10.10.60 375 446 4.4E-13 T 29-03-2018 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 Gene3D G3DSA:3.40.50.2300 1 119 8.2E-30 T 29-03-2018 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 4.6E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 SMART SM00448 1 108 6.2E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 SUPERFAMILY SSF52540 133 376 5.19E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 Gene3D G3DSA:3.40.50.300 128 305 6.6E-27 T 29-03-2018 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS06675 cb70bb2467ded2a6839e3ca69175883d 454 Pfam PF00072 Response regulator receiver domain 2 108 5.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS12165 e56fc2c35215b72899fbc442e3bac35f 156 Gene3D G3DSA:1.20.5.620 62 122 2.8E-14 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AL539_RS12165 e56fc2c35215b72899fbc442e3bac35f 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.629 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL539_RS12165 e56fc2c35215b72899fbc442e3bac35f 156 SUPERFAMILY SSF81573 63 121 6.93E-15 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AL539_RS12165 e56fc2c35215b72899fbc442e3bac35f 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.6E-61 T 29-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AL539_RS12165 e56fc2c35215b72899fbc442e3bac35f 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 9.7E-37 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL539_RS24305 c5f209178bf3b6a8645700667bfaf163 205 SUPERFAMILY SSF47616 72 198 1.67E-19 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS24305 c5f209178bf3b6a8645700667bfaf163 205 Gene3D G3DSA:3.40.30.10 1 100 8.5E-22 T 29-03-2018 AL539_RS24305 c5f209178bf3b6a8645700667bfaf163 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 9.9E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS24305 c5f209178bf3b6a8645700667bfaf163 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 192 3.1E-9 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL539_RS24305 c5f209178bf3b6a8645700667bfaf163 205 SUPERFAMILY SSF52833 1 77 1.86E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS24305 c5f209178bf3b6a8645700667bfaf163 205 Gene3D G3DSA:1.20.1050.10 101 204 2.7E-16 T 29-03-2018 AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 Pfam PF13193 AMP-binding enzyme C-terminal domain 560 633 2.4E-5 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 ProSitePatterns PS00455 Putative AMP-binding domain signature. 290 301 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 SUPERFAMILY SSF56801 38 663 2.35E-114 T 29-03-2018 AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 Pfam PF00501 AMP-binding enzyme 110 545 6.6E-46 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 Gene3D G3DSA:3.40.50.980 296 455 1.2E-22 T 29-03-2018 AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 Gene3D G3DSA:3.30.300.30 544 668 1.1E-14 T 29-03-2018 AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 Gene3D G3DSA:3.40.50.980 100 295 3.5E-33 T 29-03-2018 AL539_RS19835 f10f21ba5dddb2cc51772a43b559dcb3 676 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 665 7.1E-228 T 29-03-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 183 266 5.2E-26 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 95 177 4.0E-6 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 449 520 7.2E-14 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PIRSF PIRSF002111 1 534 2.1E-217 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.6E-230 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 429 539 2.09E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 103 171 1.2E-7 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 190 260 6.0E-28 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 275 347 1.8E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 362 434 1.9E-21 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 19 87 0.0012 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 449 520 1.9E-18 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 342 440 2.09E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 361 435 1.4E-20 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 274 348 2.6E-27 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 453 548 9.0E-19 T 29-03-2018 AL539_RS06305 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 1 92 3.4E-7 T 29-03-2018 AL539_RS09165 1917533530d1ca0721b8ffe885da336f 160 Pfam PF04073 Aminoacyl-tRNA editing domain 41 148 1.8E-17 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS09165 1917533530d1ca0721b8ffe885da336f 160 SUPERFAMILY SSF55826 6 152 3.53E-31 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS09165 1917533530d1ca0721b8ffe885da336f 160 Gene3D G3DSA:3.90.960.10 8 154 7.2E-19 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS14740 ba9c1f7e3cf55513b8207635019a3eb7 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.0E-68 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL539_RS14740 ba9c1f7e3cf55513b8207635019a3eb7 160 Gene3D G3DSA:3.50.30.40 3 159 2.0E-41 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL539_RS14740 ba9c1f7e3cf55513b8207635019a3eb7 160 SUPERFAMILY SSF89562 1 158 5.1E-47 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL539_RS14740 ba9c1f7e3cf55513b8207635019a3eb7 160 Pfam PF03737 Aldolase/RraA 5 152 4.2E-42 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 PIRSF PIRSF000089 6 321 4.6E-105 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 Pfam PF01012 Electron transfer flavoprotein domain 8 167 8.0E-38 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 SUPERFAMILY SSF52402 8 193 8.37E-45 T 29-03-2018 AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 SMART SM00893 8 194 7.2E-41 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 SUPERFAMILY SSF52467 201 321 1.64E-46 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 Gene3D G3DSA:3.40.50.1220 197 321 6.0E-58 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 Gene3D G3DSA:3.40.50.620 6 195 2.2E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS25885 9419e1203b193c3d97ebdfef5b968014 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 1.1E-35 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AL539_RS07295 5a4b8da24a34e0d988c4668c125380fa 259 SUPERFAMILY SSF52540 1 252 1.19E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07295 5a4b8da24a34e0d988c4668c125380fa 259 Pfam PF13614 AAA domain 4 174 5.7E-50 T 29-03-2018 IPR025669 AAA domain AL539_RS07295 5a4b8da24a34e0d988c4668c125380fa 259 Gene3D G3DSA:3.40.50.300 3 256 1.8E-49 T 29-03-2018 AL539_RS08485 091916b1f524792979108404902da9c6 395 SUPERFAMILY SSF55174 297 394 3.93E-16 T 29-03-2018 AL539_RS08485 091916b1f524792979108404902da9c6 395 Gene3D G3DSA:3.10.290.10 310 395 1.6E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS08485 091916b1f524792979108404902da9c6 395 Pfam PF01479 S4 domain 338 374 2.5E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS08485 091916b1f524792979108404902da9c6 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.359 T 29-03-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AL539_RS08485 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS08485 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS08485 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS08485 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS08485 091916b1f524792979108404902da9c6 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 4.3E-79 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS08485 091916b1f524792979108404902da9c6 395 Gene3D G3DSA:3.40.50.620 1 218 4.0E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS08485 091916b1f524792979108404902da9c6 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 1.3E-126 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL539_RS08485 091916b1f524792979108404902da9c6 395 SUPERFAMILY SSF52374 6 316 1.05E-97 T 29-03-2018 AL539_RS08485 091916b1f524792979108404902da9c6 395 Gene3D G3DSA:1.10.240.10 219 309 4.8E-27 T 29-03-2018 AL539_RS08485 091916b1f524792979108404902da9c6 395 SMART SM00363 334 393 9.5E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS08485 091916b1f524792979108404902da9c6 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS01900 1676256633185b4b433929b93b1ede86 569 Gene3D G3DSA:1.10.3720.10 1 284 3.2E-22 T 29-03-2018 AL539_RS01900 1676256633185b4b433929b93b1ede86 569 SUPERFAMILY SSF161098 301 540 2.52E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS01900 1676256633185b4b433929b93b1ede86 569 Gene3D G3DSA:1.10.3720.10 338 549 3.9E-17 T 29-03-2018 AL539_RS01900 1676256633185b4b433929b93b1ede86 569 SUPERFAMILY SSF161098 5 276 1.44E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02965 0c0f8466794bcbc76f5593c359db94bf 181 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 180 1.3E-67 T 29-03-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178 AL539_RS02965 0c0f8466794bcbc76f5593c359db94bf 181 Gene3D G3DSA:3.40.630.30 24 180 9.6E-21 T 29-03-2018 AL539_RS02965 0c0f8466794bcbc76f5593c359db94bf 181 Pfam PF00583 Acetyltransferase (GNAT) family 61 146 3.3E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS02965 0c0f8466794bcbc76f5593c359db94bf 181 SUPERFAMILY SSF55729 27 146 2.83E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 Gene3D G3DSA:1.10.275.10 13 151 1.7E-52 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 Gene3D G3DSA:1.10.40.30 429 478 1.1E-19 T 29-03-2018 AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 Pfam PF10415 Fumarase C C-terminus 421 473 4.2E-18 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.1E-252 T 29-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 Pfam PF00206 Lyase 23 355 1.5E-102 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 Gene3D G3DSA:1.20.200.10 152 428 8.4E-74 T 29-03-2018 AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 SUPERFAMILY SSF48557 14 467 1.41E-145 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS10920 0f14203da7447efad6332a2dd53d8c11 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 SUPERFAMILY SSF52540 304 553 7.56E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 Gene3D G3DSA:3.40.50.300 299 570 7.2E-72 T 29-03-2018 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 Gene3D G3DSA:3.40.50.300 1 286 1.3E-70 T 29-03-2018 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.7E-6 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 567 7.9E-4 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 SUPERFAMILY SSF52540 3 253 1.07E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF00005 ABC transporter 24 181 8.3E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF00005 ABC transporter 330 483 4.7E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 SMART SM00382 338 534 8.0E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS12485 a6fc534ab7c3091f7ec5892295820c12 571 SMART SM00382 32 231 2.3E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17290 1b71a388983433ec41c6ab799ed32f67 105 SUPERFAMILY SSF158757 8 85 3.66E-36 T 29-03-2018 IPR023163 SMc04008-like domain AL539_RS17290 1b71a388983433ec41c6ab799ed32f67 105 Gene3D G3DSA:1.10.3340.10 9 91 2.9E-39 T 29-03-2018 IPR023163 SMc04008-like domain AL539_RS17290 1b71a388983433ec41c6ab799ed32f67 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 4.1E-35 T 29-03-2018 IPR023163 SMc04008-like domain AL539_RS01835 4ed0b792283aec31556e2ec162c78054 309 Gene3D G3DSA:3.40.50.1820 26 309 7.9E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS01835 4ed0b792283aec31556e2ec162c78054 309 SUPERFAMILY SSF53474 28 305 2.63E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS01835 4ed0b792283aec31556e2ec162c78054 309 Pfam PF00561 alpha/beta hydrolase fold 33 182 3.2E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS13165 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13165 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13165 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 29-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13165 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL539_RS13165 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 Gene3D G3DSA:1.10.3860.10 1 413 1.6E-136 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 SUPERFAMILY SSF118215 9 407 5.36E-121 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 5.5E-131 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23340 a9bd719adb37a7439d74d5763f7d9f77 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 4.4E-52 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS23870 d56e36fc6d42d43ebe0f293f5fdda7bc 802 Pfam PF00577 Outer membrane usher protein 233 693 7.2E-33 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AL539_RS18425 244eaebcd7ef58a101d139edde66133e 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 1.0E-203 T 29-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL539_RS18425 244eaebcd7ef58a101d139edde66133e 458 Gene3D G3DSA:3.40.50.1220 285 458 8.4E-91 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS18425 244eaebcd7ef58a101d139edde66133e 458 PIRSF PIRSF000204 1 458 3.1E-235 T 29-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AL539_RS18425 244eaebcd7ef58a101d139edde66133e 458 SUPERFAMILY SSF52467 285 458 2.13E-78 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 Gene3D G3DSA:3.30.250.10 269 326 8.7E-25 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 SMART SM00382 57 228 4.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.0E-142 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.543 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 ProSitePatterns PS00321 recA signature. 213 221 - T 29-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 SUPERFAMILY SSF54752 269 325 4.32E-21 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 Gene3D G3DSA:3.40.50.300 26 268 2.9E-45 T 29-03-2018 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.4E-169 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 297 314 3.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 93 122 3.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 243 272 3.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 210 238 3.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 127 156 3.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS08920 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 165 194 3.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL539_RS07140 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 SMART SM00855 2 116 6.1E-7 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL539_RS07140 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 7.4E-37 T 29-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 AL539_RS07140 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 Gene3D G3DSA:3.40.50.1240 1 153 7.9E-21 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AL539_RS07140 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 SUPERFAMILY SSF53254 1 143 1.23E-21 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AL539_RS07140 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 9.1E-10 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL539_RS09295 421b7033b4333aa451338a7c713eb562 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.363 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL539_RS09295 421b7033b4333aa451338a7c713eb562 306 Gene3D G3DSA:3.40.710.10 1 306 1.1E-122 T 29-03-2018 AL539_RS09295 421b7033b4333aa451338a7c713eb562 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 7.0E-130 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL539_RS09295 421b7033b4333aa451338a7c713eb562 306 SUPERFAMILY SSF56601 6 306 9.65E-114 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS09295 421b7033b4333aa451338a7c713eb562 306 Pfam PF04960 Glutaminase 22 306 1.3E-112 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL539_RS25515 00a8e9cc5546dc07c5a35fed637767c2 484 SUPERFAMILY SSF52540 41 208 1.5E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25515 00a8e9cc5546dc07c5a35fed637767c2 484 Gene3D G3DSA:3.40.50.300 36 241 4.3E-25 T 29-03-2018 AL539_RS25515 00a8e9cc5546dc07c5a35fed637767c2 484 Gene3D G3DSA:3.40.50.300 242 462 4.9E-34 T 29-03-2018 AL539_RS25515 00a8e9cc5546dc07c5a35fed637767c2 484 Pfam PF00005 ABC transporter 271 422 5.4E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS25515 00a8e9cc5546dc07c5a35fed637767c2 484 Pfam PF00005 ABC transporter 40 159 2.0E-11 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS25515 00a8e9cc5546dc07c5a35fed637767c2 484 SMART SM00382 279 480 1.1E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS25515 00a8e9cc5546dc07c5a35fed637767c2 484 SUPERFAMILY SSF52540 237 456 1.33E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 SUPERFAMILY SSF47005 106 150 2.62E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 4.0E-82 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 5.1E-187 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 SUPERFAMILY SSF51230 1 94 5.89E-24 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 SUPERFAMILY SSF52777 173 401 3.51E-90 T 29-03-2018 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 Pfam PF00364 Biotin-requiring enzyme 4 76 2.5E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 Gene3D G3DSA:3.90.1170.30 1 47 7.6E-14 T 29-03-2018 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 Pfam PF02817 e3 binding domain 113 146 1.9E-13 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 Gene3D G3DSA:4.10.320.10 93 164 3.1E-18 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AL539_RS16795 b63245be625f656df068f41232d3f0e3 402 Gene3D G3DSA:3.30.559.10 165 400 1.1E-91 T 29-03-2018 AL539_RS03390 11ef5c1ce58b098f6ec8e369e90bbee4 288 Pfam PF00691 OmpA family 167 261 3.0E-21 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS03390 11ef5c1ce58b098f6ec8e369e90bbee4 288 SUPERFAMILY SSF103088 155 267 7.06E-31 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS03390 11ef5c1ce58b098f6ec8e369e90bbee4 288 Gene3D G3DSA:3.30.1330.60 108 281 2.8E-33 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS03390 11ef5c1ce58b098f6ec8e369e90bbee4 288 PRINTS PR01021 OMPA domain signature 212 228 3.8E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS03390 11ef5c1ce58b098f6ec8e369e90bbee4 288 PRINTS PR01021 OMPA domain signature 197 212 3.8E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS03390 11ef5c1ce58b098f6ec8e369e90bbee4 288 PRINTS PR01021 OMPA domain signature 167 189 3.8E-10 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 Gene3D G3DSA:3.40.50.10490 5 240 4.1E-95 T 29-03-2018 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.4E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.4E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.4E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.4E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.4E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.4E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 Pfam PF00318 Ribosomal protein S2 9 224 3.3E-94 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 SUPERFAMILY SSF52313 6 232 1.31E-95 T 29-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.1E-108 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL539_RS07765 ca025d5e217bc8065f1c3bf42e5c02cf 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.134 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS12950 b44c08d85173ff681abf887dc968d73a 189 SUPERFAMILY SSF55811 4 181 3.79E-41 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS12950 b44c08d85173ff681abf887dc968d73a 189 Pfam PF00293 NUDIX domain 46 157 8.7E-16 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS12950 b44c08d85173ff681abf887dc968d73a 189 Gene3D G3DSA:3.90.79.10 7 189 1.1E-38 T 29-03-2018 AL539_RS12950 b44c08d85173ff681abf887dc968d73a 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 171 353 1.7E-37 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 SUPERFAMILY SSF58104 88 389 3.66E-63 T 29-03-2018 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 225 252 6.0E-17 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 151 180 6.0E-17 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 283 6.0E-17 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 Gene3D G3DSA:1.10.287.950 167 392 3.8E-45 T 29-03-2018 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 Gene3D G3DSA:1.10.287.950 64 166 0.29 T 29-03-2018 AL539_RS13815 b59ea6e7d393d8bb15c7ecc57b22cf6e 393 SMART SM00283 127 385 6.3E-55 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 3.1E-17 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 3.1E-17 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 3.1E-17 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 3.1E-17 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 3.1E-17 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 3.1E-17 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 Pfam PF00813 FliP family 92 283 2.5E-79 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 1.6E-82 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS07355 810dc7729b04bce719219a57fdb13254 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS16815 cea01ecd08db2967aaf9bfcc52c850aa 262 SMART SM00382 29 199 1.2E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS16815 cea01ecd08db2967aaf9bfcc52c850aa 262 Gene3D G3DSA:3.40.50.300 1 240 1.1E-53 T 29-03-2018 AL539_RS16815 cea01ecd08db2967aaf9bfcc52c850aa 262 SUPERFAMILY SSF52540 4 217 3.09E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16815 cea01ecd08db2967aaf9bfcc52c850aa 262 Pfam PF00005 ABC transporter 20 148 1.7E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS01660 a577e07085697f748f73568cc4dbb0e7 171 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.464 T 29-03-2018 IPR023006 Uncharacterised protein family UPF0225 AL539_RS01660 a577e07085697f748f73568cc4dbb0e7 171 SUPERFAMILY SSF103642 151 171 3.76E-8 T 29-03-2018 AL539_RS01660 a577e07085697f748f73568cc4dbb0e7 171 SUPERFAMILY SSF54427 28 128 1.14E-34 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS01660 a577e07085697f748f73568cc4dbb0e7 171 Pfam PF02810 SEC-C motif 4 18 3.3E-6 T 29-03-2018 IPR004027 SEC-C motif AL539_RS01660 a577e07085697f748f73568cc4dbb0e7 171 Pfam PF02810 SEC-C motif 154 171 5.1E-10 T 29-03-2018 IPR004027 SEC-C motif AL539_RS01660 a577e07085697f748f73568cc4dbb0e7 171 Gene3D G3DSA:3.10.450.50 3 130 1.1E-42 T 29-03-2018 AL539_RS19995 ab70a681767fa212f79414e27f68ee2a 524 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 246 497 1.0E-67 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 AL539_RS19995 ab70a681767fa212f79414e27f68ee2a 524 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 1.0E-26 T 29-03-2018 IPR010657 ImpA, N-terminal AL539_RS19995 ab70a681767fa212f79414e27f68ee2a 524 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 497 1.4E-81 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 AL539_RS08140 52d1d44c34280655d7da6df5a25ad9b6 343 SUPERFAMILY SSF51161 90 323 1.14E-34 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS08140 52d1d44c34280655d7da6df5a25ad9b6 343 Gene3D G3DSA:2.160.10.10 172 340 5.0E-19 T 29-03-2018 AL539_RS08140 52d1d44c34280655d7da6df5a25ad9b6 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.124 T 29-03-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 AL539_RS08140 52d1d44c34280655d7da6df5a25ad9b6 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS08140 52d1d44c34280655d7da6df5a25ad9b6 343 Gene3D G3DSA:3.30.60.70 131 171 1.2E-15 T 29-03-2018 AL539_RS08140 52d1d44c34280655d7da6df5a25ad9b6 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.9E-16 T 29-03-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 AL539_RS08140 52d1d44c34280655d7da6df5a25ad9b6 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 3.3E-180 T 29-03-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 AL539_RS00940 5a565fadc09286ba23491205bed7bacf 322 Pfam PF00589 Phage integrase family 139 309 1.4E-35 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00940 5a565fadc09286ba23491205bed7bacf 322 Gene3D G3DSA:1.10.443.10 137 318 3.8E-40 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00940 5a565fadc09286ba23491205bed7bacf 322 SUPERFAMILY SSF56349 137 319 1.06E-48 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS05580 7647c7de0beffde3c644970e796ed748 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 4.0E-98 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL539_RS05580 7647c7de0beffde3c644970e796ed748 505 PIRSF PIRSF001394 1 505 1.9E-217 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AL539_RS05580 7647c7de0beffde3c644970e796ed748 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.8E-51 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL539_RS05580 7647c7de0beffde3c644970e796ed748 505 Pfam PF05683 Fumarase C-terminus 289 490 3.5E-84 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL539_RS05580 7647c7de0beffde3c644970e796ed748 505 Gene3D G3DSA:3.20.130.10 315 490 2.5E-68 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL539_RS05580 7647c7de0beffde3c644970e796ed748 505 SUPERFAMILY SSF117457 317 489 4.84E-64 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL539_RS05580 7647c7de0beffde3c644970e796ed748 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.9E-63 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 5.4E-43 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 SUPERFAMILY SSF55831 2 283 1.31E-91 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 Pfam PF00303 Thymidylate synthase 2 283 1.8E-74 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.5E-14 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.5E-14 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.5E-14 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.5E-14 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.29 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 29-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS14905 e255379f0a3be72d2f121958e07717f7 283 Gene3D G3DSA:3.30.572.10 1 283 4.5E-80 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL539_RS07955 2ffa4f8d439b6b066f330204fe031a91 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.836 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL539_RS07955 2ffa4f8d439b6b066f330204fe031a91 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.0E-62 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS07955 2ffa4f8d439b6b066f330204fe031a91 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 2.9E-109 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL539_RS07955 2ffa4f8d439b6b066f330204fe031a91 210 PIRSF PIRSF006102 3 210 6.4E-73 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS15590 821c8cf2cc0f1b24f427140ab55386b5 102 Gene3D G3DSA:3.60.21.10 5 102 2.6E-4 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS15590 821c8cf2cc0f1b24f427140ab55386b5 102 SUPERFAMILY SSF56300 5 82 4.74E-5 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 Pfam PF00266 Aminotransferase class-V 5 368 1.5E-89 T 29-03-2018 IPR000192 Aminotransferase class V domain AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.3E-229 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.558 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 SUPERFAMILY SSF53383 5 391 7.18E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 Gene3D G3DSA:3.40.640.10 1 231 6.9E-54 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 PIRSF PIRSF005572 2 384 2.5E-137 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AL539_RS15300 84903dc593931e26c7077aa0666b2454 404 Gene3D G3DSA:3.90.1150.10 232 404 8.2E-55 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS01410 5b82d5d6eca948d122680d4edc120255 53 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 11 28 4.1E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01410 5b82d5d6eca948d122680d4edc120255 53 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 28 48 4.1E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01410 5b82d5d6eca948d122680d4edc120255 53 SUPERFAMILY SSF46689 4 43 5.38E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS01410 5b82d5d6eca948d122680d4edc120255 53 Gene3D G3DSA:1.10.10.60 4 46 3.5E-9 T 29-03-2018 AL539_RS01410 5b82d5d6eca948d122680d4edc120255 53 Pfam PF02954 Bacterial regulatory protein, Fis family 8 42 2.1E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS01020 8d18029ad2e84ad6ea5a7bd4285bb672 279 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 81 184 6.0E-42 T 29-03-2018 AL539_RS01020 8d18029ad2e84ad6ea5a7bd4285bb672 279 SUPERFAMILY SSF109604 5 170 1.26E-26 T 29-03-2018 AL539_RS01020 8d18029ad2e84ad6ea5a7bd4285bb672 279 Gene3D G3DSA:1.10.3210.10 1 195 1.3E-33 T 29-03-2018 AL539_RS01020 8d18029ad2e84ad6ea5a7bd4285bb672 279 SMART SM00471 28 149 0.0022 T 29-03-2018 IPR003607 HD/PDEase domain AL539_RS01020 8d18029ad2e84ad6ea5a7bd4285bb672 279 Pfam PF13023 HD domain 16 128 8.1E-14 T 29-03-2018 IPR006674 HD domain AL539_RS01160 7f9dd75f254fa511732cef51bf60bfa3 336 SUPERFAMILY SSF52980 1 189 2.84E-42 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS01160 7f9dd75f254fa511732cef51bf60bfa3 336 Gene3D G3DSA:3.90.320.10 1 202 9.9E-38 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL539_RS01160 7f9dd75f254fa511732cef51bf60bfa3 336 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 159 3.3E-39 T 29-03-2018 IPR017482 Putative phage-type endonuclease AL539_RS01160 7f9dd75f254fa511732cef51bf60bfa3 336 Pfam PF09588 YqaJ-like viral recombinase domain 12 148 2.4E-23 T 29-03-2018 IPR019080 YqaJ viral recombinase AL539_RS08365 f2192b24356f8ce5981ee2bfcdbfcc71 296 Pfam PF01136 Peptidase family U32 86 241 2.6E-12 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL539_RS10985 e2a6fd9c74c833b3959abe0e7905f301 209 Pfam PF00929 Exonuclease 31 193 7.5E-19 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS10985 e2a6fd9c74c833b3959abe0e7905f301 209 Gene3D G3DSA:3.30.420.10 18 202 2.1E-30 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS10985 e2a6fd9c74c833b3959abe0e7905f301 209 SMART SM00479 29 202 1.0E-26 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS10985 e2a6fd9c74c833b3959abe0e7905f301 209 SUPERFAMILY SSF53098 27 198 2.48E-35 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS03090 7edd711a27ce0ba3d656b36d2baf9261 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 5.8E-50 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL539_RS03090 7edd711a27ce0ba3d656b36d2baf9261 472 PIRSF PIRSF002457 1 472 8.2E-120 T 29-03-2018 IPR030676 Citrate carrier CitT-related AL539_RS03090 7edd711a27ce0ba3d656b36d2baf9261 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 3.9E-78 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL539_RS11475 309b430a53fc84649ab6ac682133eb54 74 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 74 2.2E-24 T 29-03-2018 IPR019620 Putative metal-binding protein AL539_RS11475 309b430a53fc84649ab6ac682133eb54 74 Pfam PF10678 Protein of unknown function (DUF2492) 4 73 1.6E-23 T 29-03-2018 IPR019620 Putative metal-binding protein AL539_RS18465 0f13a706d4ad2f2567859b31c35e9655 279 SUPERFAMILY SSF53850 92 273 6.98E-21 T 29-03-2018 AL539_RS18465 0f13a706d4ad2f2567859b31c35e9655 279 SUPERFAMILY SSF46785 6 87 1.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18465 0f13a706d4ad2f2567859b31c35e9655 279 Gene3D G3DSA:1.10.10.10 2 84 8.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18465 0f13a706d4ad2f2567859b31c35e9655 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.8E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS18465 0f13a706d4ad2f2567859b31c35e9655 279 Pfam PF03466 LysR substrate binding domain 92 167 2.1E-12 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS18465 0f13a706d4ad2f2567859b31c35e9655 279 Gene3D G3DSA:3.40.190.10 88 184 1.0E-13 T 29-03-2018 AL539_RS18465 0f13a706d4ad2f2567859b31c35e9655 279 Gene3D G3DSA:3.40.190.10 188 237 0.025 T 29-03-2018 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 SUPERFAMILY SSF51735 108 295 7.02E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 5.7E-52 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 SUPERFAMILY SSF55021 335 409 2.82E-18 T 29-03-2018 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 Gene3D G3DSA:3.40.50.720 1 137 6.8E-45 T 29-03-2018 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 5.8E-39 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 SUPERFAMILY SSF52283 7 136 1.32E-49 T 29-03-2018 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 Gene3D G3DSA:3.40.50.720 138 295 1.5E-41 T 29-03-2018 AL539_RS09145 d8e2de14dad8609e2bff4b9b2d518959 410 Gene3D G3DSA:3.30.70.260 328 409 7.6E-17 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 SUPERFAMILY SSF51905 96 376 4.72E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 Gene3D G3DSA:3.50.50.60 192 331 2.0E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 Gene3D G3DSA:3.50.50.60 55 191 1.8E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 Gene3D G3DSA:3.50.50.60 336 393 1.9E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 SUPERFAMILY SSF57802 1 54 1.21E-20 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00163 Rubredoxin signature 3 19 1.4E-6 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00163 Rubredoxin signature 33 49 1.4E-6 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 Gene3D G3DSA:2.20.28.10 1 54 2.4E-23 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 323 337 1.2E-14 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 261 1.2E-14 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 1.2E-14 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 96 118 1.2E-14 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 Pfam PF00301 Rubredoxin 3 49 8.8E-21 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 97 374 3.3E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 116 1.7E-22 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 254 1.7E-22 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 192 210 1.7E-22 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 1.7E-22 T 29-03-2018 AL539_RS24245 e5b3495215409d88963fcb83ca8649dd 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 322 338 1.7E-22 T 29-03-2018 AL539_RS02545 060cf80f478933aeac9ff1c4e53812f6 327 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS02545 060cf80f478933aeac9ff1c4e53812f6 327 SUPERFAMILY SSF52540 1 249 1.47E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02545 060cf80f478933aeac9ff1c4e53812f6 327 Gene3D G3DSA:3.40.50.300 1 323 9.7E-75 T 29-03-2018 AL539_RS02545 060cf80f478933aeac9ff1c4e53812f6 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 294 2.1E-17 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS02545 060cf80f478933aeac9ff1c4e53812f6 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 313 7.5E-23 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS02545 060cf80f478933aeac9ff1c4e53812f6 327 SMART SM00382 30 228 4.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02545 060cf80f478933aeac9ff1c4e53812f6 327 Pfam PF00005 ABC transporter 22 178 4.5E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS10655 db5fe74d0067dd181dbfd341e3fcf645 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.209 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL539_RS10655 db5fe74d0067dd181dbfd341e3fcf645 310 Pfam PF01715 IPP transferase 42 287 5.4E-86 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL539_RS10655 db5fe74d0067dd181dbfd341e3fcf645 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 7.2E-115 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL539_RS10655 db5fe74d0067dd181dbfd341e3fcf645 310 Gene3D G3DSA:1.10.287.890 202 284 1.7E-24 T 29-03-2018 AL539_RS10655 db5fe74d0067dd181dbfd341e3fcf645 310 SUPERFAMILY SSF52540 10 153 3.32E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10655 db5fe74d0067dd181dbfd341e3fcf645 310 Gene3D G3DSA:3.40.50.300 4 200 2.7E-63 T 29-03-2018 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 SMART SM00562 3 140 6.2E-89 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.944 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.7E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.7E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.7E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.7E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.7E-38 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.7E-58 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 Gene3D G3DSA:3.30.70.141 56 140 3.3E-34 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 Gene3D G3DSA:3.30.70.141 1 55 7.8E-20 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 SUPERFAMILY SSF54919 1 139 6.68E-61 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL539_RS15340 0fe3cfff231c68c798cedd62e7db6b30 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 29-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL539_RS11755 86888fb7664da52f0249855d1fd9cf0b 290 Hamap MF_00697 UPF0276 protein . 10 282 44.036 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 AL539_RS11755 86888fb7664da52f0249855d1fd9cf0b 290 Gene3D G3DSA:3.20.20.150 5 286 6.7E-79 T 29-03-2018 AL539_RS11755 86888fb7664da52f0249855d1fd9cf0b 290 Pfam PF05114 Protein of unknown function (DUF692) 10 273 1.3E-106 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 AL539_RS11755 86888fb7664da52f0249855d1fd9cf0b 290 SUPERFAMILY SSF51658 31 255 3.48E-9 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL539_RS21105 2016a0981e41bef2dd59115055e3a6d2 442 Gene3D G3DSA:1.20.1600.10 78 279 1.1E-17 T 29-03-2018 AL539_RS21105 2016a0981e41bef2dd59115055e3a6d2 442 SUPERFAMILY SSF111369 198 356 3.53E-7 T 29-03-2018 AL539_RS21105 2016a0981e41bef2dd59115055e3a6d2 442 SUPERFAMILY SSF111369 150 169 3.53E-7 T 29-03-2018 AL539_RS21105 2016a0981e41bef2dd59115055e3a6d2 442 SUPERFAMILY SSF111369 64 121 3.53E-7 T 29-03-2018 AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.4E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.4E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.4E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.2E-60 T 29-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 6.2E-15 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 Gene3D G3DSA:3.10.20.30 6 112 6.8E-32 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS15325 6a385cc0f923178c4c39e71dfc8e3211 112 SUPERFAMILY SSF54292 5 107 2.77E-32 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS08240 ee224ba5a2f28370821b55ed0831a3d8 331 SUPERFAMILY SSF56935 49 302 9.16E-5 T 29-03-2018 AL539_RS08240 ee224ba5a2f28370821b55ed0831a3d8 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 186 324 6.4E-8 T 29-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AL539_RS08240 ee224ba5a2f28370821b55ed0831a3d8 331 Gene3D G3DSA:2.40.128.130 43 327 1.8E-13 T 29-03-2018 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 46.176 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 Gene3D G3DSA:3.90.1150.10 290 403 5.4E-24 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 SUPERFAMILY SSF53383 16 399 4.3E-131 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 PIRSF PIRSF000521 28 155 4.0E-7 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 PIRSF PIRSF000521 172 402 1.8E-37 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.2E-207 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 Pfam PF00202 Aminotransferase class-III 22 399 2.4E-128 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 2.2E-150 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL539_RS10535 1bf2a69ab192e437bf12e36e3bd15564 403 Gene3D G3DSA:3.40.640.10 49 289 5.2E-83 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS14330 ce340626838a829c5f9066b2b5d970bd 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 8.6E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL539_RS14330 ce340626838a829c5f9066b2b5d970bd 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 118 9.4E-36 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL539_RS14330 ce340626838a829c5f9066b2b5d970bd 119 SMART SM00905 6 116 1.1E-47 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL539_RS14330 ce340626838a829c5f9066b2b5d970bd 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 1.5E-29 T 29-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL539_RS14330 ce340626838a829c5f9066b2b5d970bd 119 SUPERFAMILY SSF55620 3 118 4.39E-37 T 29-03-2018 AL539_RS14330 ce340626838a829c5f9066b2b5d970bd 119 Gene3D G3DSA:3.30.1130.10 3 119 9.6E-36 T 29-03-2018 AL539_RS16095 d9a89c072b366066e513a0ca48dc9928 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 2.0E-78 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS16095 d9a89c072b366066e513a0ca48dc9928 156 SUPERFAMILY SSF75217 1 154 1.47E-50 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS16095 d9a89c072b366066e513a0ca48dc9928 156 PIRSF PIRSF004505 1 155 6.9E-44 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS16095 d9a89c072b366066e513a0ca48dc9928 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 7.8E-49 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS16095 d9a89c072b366066e513a0ca48dc9928 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.678 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS16095 d9a89c072b366066e513a0ca48dc9928 156 Gene3D G3DSA:3.40.1280.10 1 155 2.1E-52 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS18865 d9b4d270f858a3bcdc7900732964ad00 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 256 1.3E-12 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS18865 d9b4d270f858a3bcdc7900732964ad00 357 Gene3D G3DSA:2.40.50.100 155 292 7.7E-7 T 29-03-2018 AL539_RS18865 d9b4d270f858a3bcdc7900732964ad00 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 5.3E-70 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS18865 d9b4d270f858a3bcdc7900732964ad00 357 SUPERFAMILY SSF111369 57 274 4.32E-32 T 29-03-2018 AL539_RS18865 d9b4d270f858a3bcdc7900732964ad00 357 Gene3D G3DSA:2.40.50.100 60 112 8.7E-10 T 29-03-2018 AL539_RS18865 d9b4d270f858a3bcdc7900732964ad00 357 Gene3D G3DSA:1.10.287.470 113 154 3.5E-15 T 29-03-2018 AL539_RS05390 8dbda20df83f3594690241387428e9e1 131 Pfam PF11948 Protein of unknown function (DUF3465) 13 131 1.6E-58 T 29-03-2018 IPR021856 Protein of unknown function DUF3465 AL539_RS07445 25d278b2c7e3bd3645e0a49d06fc26fb 664 Gene3D G3DSA:1.20.140.50 187 501 0.014 T 29-03-2018 AL539_RS07445 25d278b2c7e3bd3645e0a49d06fc26fb 664 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 5.6E-21 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AL539_RS07445 25d278b2c7e3bd3645e0a49d06fc26fb 664 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 429 653 8.5E-56 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AL539_RS07445 25d278b2c7e3bd3645e0a49d06fc26fb 664 Pfam PF07196 Flagellin hook IN motif 125 177 2.1E-6 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS07445 25d278b2c7e3bd3645e0a49d06fc26fb 664 Gene3D G3DSA:1.20.5.50 542 663 0.0086 T 29-03-2018 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.148 T 29-03-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.8E-148 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 SMART SM00481 4 73 6.7E-7 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 Pfam PF02811 PHP domain 8 100 3.5E-8 T 29-03-2018 IPR004013 PHP domain GO:0003824 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 4.9E-14 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 1.2E-155 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 Gene3D G3DSA:2.40.50.140 873 1019 7.3E-11 T 29-03-2018 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 Gene3D G3DSA:3.20.20.140 1 235 3.3E-27 T 29-03-2018 AL539_RS06335 2b730525694c2c0abaf61ddb38feb712 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 996 4.1E-8 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL539_RS02955 c87c438e47dd923219d753effc9e07f8 248 SUPERFAMILY SSF53098 57 238 1.37E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS02955 c87c438e47dd923219d753effc9e07f8 248 SMART SM00479 57 238 1.8E-25 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS02955 c87c438e47dd923219d753effc9e07f8 248 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 53 239 2.3E-21 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS02955 c87c438e47dd923219d753effc9e07f8 248 Pfam PF00929 Exonuclease 59 229 1.5E-16 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS02955 c87c438e47dd923219d753effc9e07f8 248 Gene3D G3DSA:3.30.420.10 45 238 8.8E-30 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 333 1.0E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 Gene3D G3DSA:3.40.50.720 2 51 0.48 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 SUPERFAMILY SSF51905 225 373 2.05E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 SUPERFAMILY SSF51905 1 56 2.05E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 SUPERFAMILY SSF51905 103 191 2.05E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 Gene3D G3DSA:1.10.287.990 52 105 1.9E-15 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PIRSF PIRSF000350 1 473 5.0E-61 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 Gene3D G3DSA:3.50.50.60 172 349 6.6E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 3.6E-16 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.1E-40 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 7.0E-19 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 7.0E-19 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 7.0E-19 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.0E-19 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 7.0E-19 T 29-03-2018 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 SUPERFAMILY SSF55424 355 474 6.01E-24 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS10325 5925c4fcd0821faa1ea942c94808926f 490 Gene3D G3DSA:3.30.390.30 356 479 2.5E-22 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 SUPERFAMILY SSF53383 4 395 1.29E-121 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.5E-206 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 Gene3D G3DSA:3.40.640.10 105 278 1.9E-25 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 Gene3D G3DSA:3.90.1150.10 20 104 1.2E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 Gene3D G3DSA:3.90.1150.10 279 397 6.0E-41 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 Pfam PF00155 Aminotransferase class I and II 43 387 9.6E-75 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS23845 e1261b7d030f928d5575c320b7383ac4 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.325 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL539_RS02230 6412cc3be5bb6525fe13e9174b86c906 511 Gene3D G3DSA:1.20.200.10 199 507 1.2E-122 T 29-03-2018 AL539_RS02230 6412cc3be5bb6525fe13e9174b86c906 511 SUPERFAMILY SSF48557 4 506 4.24E-193 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL539_RS02230 6412cc3be5bb6525fe13e9174b86c906 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 29-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL539_RS02230 6412cc3be5bb6525fe13e9174b86c906 511 Gene3D G3DSA:1.10.275.10 2 197 2.2E-72 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AL539_RS02230 6412cc3be5bb6525fe13e9174b86c906 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 496 4.8E-215 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02230 6412cc3be5bb6525fe13e9174b86c906 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.347 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02230 6412cc3be5bb6525fe13e9174b86c906 511 Pfam PF00221 Aromatic amino acid lyase 12 470 8.0E-189 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL539_RS24115 30174f6c02f27540e69b002d87d28632 573 SUPERFAMILY SSF48452 350 446 3.97E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS24115 30174f6c02f27540e69b002d87d28632 573 Gene3D G3DSA:1.25.40.10 347 479 2.1E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS24115 30174f6c02f27540e69b002d87d28632 573 SMART SM00327 84 284 6.1E-5 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS24115 30174f6c02f27540e69b002d87d28632 573 Pfam PF13519 von Willebrand factor type A domain 88 194 4.1E-12 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS24115 30174f6c02f27540e69b002d87d28632 573 Gene3D G3DSA:3.40.50.410 83 289 5.2E-20 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS24115 30174f6c02f27540e69b002d87d28632 573 SUPERFAMILY SSF53300 87 270 1.31E-18 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS22725 226e4fdb89d7d0519b1517c6e12a93ca 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 3.0E-18 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL539_RS22725 226e4fdb89d7d0519b1517c6e12a93ca 283 SUPERFAMILY SSF53697 104 277 4.71E-38 T 29-03-2018 AL539_RS22725 226e4fdb89d7d0519b1517c6e12a93ca 283 Gene3D G3DSA:1.10.10.10 1 103 3.5E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22725 226e4fdb89d7d0519b1517c6e12a93ca 283 Gene3D G3DSA:3.40.50.10490 104 279 1.6E-34 T 29-03-2018 AL539_RS22725 226e4fdb89d7d0519b1517c6e12a93ca 283 SUPERFAMILY SSF46689 2 77 4.48E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22725 226e4fdb89d7d0519b1517c6e12a93ca 283 Pfam PF01380 SIS domain 129 257 1.1E-17 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS16830 695bd6eb5dcd03804cafb035c0b61c0d 75 Pfam PF04023 FeoA domain 1 74 4.7E-19 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL539_RS16830 695bd6eb5dcd03804cafb035c0b61c0d 75 SMART SM00899 1 74 1.3E-23 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL539_RS16830 695bd6eb5dcd03804cafb035c0b61c0d 75 Gene3D G3DSA:2.30.30.90 1 75 7.7E-21 T 29-03-2018 AL539_RS16830 695bd6eb5dcd03804cafb035c0b61c0d 75 SUPERFAMILY SSF50037 4 74 4.58E-19 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal AL539_RS21940 cee0555df030a661465080176e381227 306 SUPERFAMILY SSF52768 12 302 4.32E-95 T 29-03-2018 AL539_RS21940 cee0555df030a661465080176e381227 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 9.0E-93 T 29-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AL539_RS21940 cee0555df030a661465080176e381227 306 PIRSF PIRSF036979 13 305 7.8E-98 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AL539_RS21940 cee0555df030a661465080176e381227 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL539_RS21940 cee0555df030a661465080176e381227 306 Gene3D G3DSA:3.40.800.10 4 306 2.2E-98 T 29-03-2018 AL539_RS21940 cee0555df030a661465080176e381227 306 Pfam PF00491 Arginase family 33 298 3.8E-90 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AL539_RS25090 69c33c6306e2216c598dfdacb0ad6f72 157 Gene3D G3DSA:1.10.287.460 17 46 5.3E-7 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL539_RS25090 69c33c6306e2216c598dfdacb0ad6f72 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 1.9E-11 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL539_RS25090 69c33c6306e2216c598dfdacb0ad6f72 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 67 154 6.5E-26 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL539_RS25090 69c33c6306e2216c598dfdacb0ad6f72 157 Gene3D G3DSA:3.10.50.40 47 157 8.4E-42 T 29-03-2018 AL539_RS25090 69c33c6306e2216c598dfdacb0ad6f72 157 SUPERFAMILY SSF54534 19 156 9.53E-52 T 29-03-2018 AL539_RS19065 cffcbb507ec4c7c2ee6ae1137a36e94d 366 SUPERFAMILY SSF51395 3 364 9.16E-125 T 29-03-2018 AL539_RS19065 cffcbb507ec4c7c2ee6ae1137a36e94d 366 Gene3D G3DSA:3.20.20.70 1 366 1.2E-126 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS19065 cffcbb507ec4c7c2ee6ae1137a36e94d 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 6.8E-99 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 SUPERFAMILY SSF53720 5 454 1.31E-84 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 SUPERFAMILY SSF56796 452 863 1.24E-114 T 29-03-2018 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:3.40.50.1970 431 642 1.4E-48 T 29-03-2018 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:3.40.605.10 1 226 3.5E-31 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 7.4E-112 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 PIRSF PIRSF000111 1 865 0.0 T 29-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:3.40.309.10 227 405 1.6E-25 T 29-03-2018 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.9E-25 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS06795 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:1.20.1090.10 643 867 2.0E-58 T 29-03-2018 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 Gene3D G3DSA:3.40.190.10 21 143 1.8E-23 T 29-03-2018 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 Pfam PF13416 Bacterial extracellular solute-binding protein 41 307 3.8E-37 T 29-03-2018 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 SUPERFAMILY SSF53850 24 341 4.6E-87 T 29-03-2018 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PIRSF PIRSF019574 2 344 1.5E-107 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 4.2E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS21040 3fc7001511ac1e55b017f9917a4effdf 344 Gene3D G3DSA:3.40.190.10 144 283 9.8E-37 T 29-03-2018 AL539_RS13070 5c5ffafc58529d81cb138eee9b02df39 866 Pfam PF00593 TonB dependent receptor 354 864 3.5E-50 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS13070 5c5ffafc58529d81cb138eee9b02df39 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 169 1.0E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS13070 5c5ffafc58529d81cb138eee9b02df39 866 SUPERFAMILY SSF56935 617 866 1.53E-96 T 29-03-2018 AL539_RS13070 5c5ffafc58529d81cb138eee9b02df39 866 SUPERFAMILY SSF56935 300 572 1.53E-96 T 29-03-2018 AL539_RS13070 5c5ffafc58529d81cb138eee9b02df39 866 SUPERFAMILY SSF56935 28 229 1.53E-96 T 29-03-2018 AL539_RS13070 5c5ffafc58529d81cb138eee9b02df39 866 Gene3D G3DSA:2.40.170.20 173 866 1.5E-71 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS13070 5c5ffafc58529d81cb138eee9b02df39 866 Gene3D G3DSA:2.170.130.10 28 172 1.6E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS19005 b516f06aff0603e7999293009e78de30 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-29 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-29 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-29 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-29 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 5.6E-49 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 PIRSF PIRSF004749 1 168 1.5E-50 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 Pfam PF01327 Polypeptide deformylase 4 152 5.7E-46 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 SUPERFAMILY SSF56420 2 164 5.5E-55 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 Gene3D G3DSA:3.90.45.10 1 168 2.0E-52 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS19005 b516f06aff0603e7999293009e78de30 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.656 T 29-03-2018 IPR023635 Peptide deformylase AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 Gene3D G3DSA:3.90.1170.30 343 429 2.3E-26 T 29-03-2018 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 SUPERFAMILY SSF47648 2 70 1.14E-21 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 Gene3D G3DSA:3.40.1030.10 69 342 1.2E-83 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 9.3E-215 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.7E-23 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 SUPERFAMILY SSF54680 337 437 1.2E-28 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 SUPERFAMILY SSF52418 73 334 4.19E-89 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-21 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.554 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.5E-48 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 SMART SM00941 350 424 1.6E-28 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.5E-160 T 29-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 29-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 PIRSF PIRSF000478 1 438 5.7E-149 T 29-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS08295 39f060fe3c52e5d7191acde367971a02 442 Gene3D G3DSA:1.20.970.10 3 67 1.2E-23 T 29-03-2018 AL539_RS22150 ba3db6e36fb87e612b79da542226093c 316 Gene3D G3DSA:3.40.190.10 24 134 3.3E-19 T 29-03-2018 AL539_RS22150 ba3db6e36fb87e612b79da542226093c 316 Pfam PF09084 NMT1/THI5 like 37 248 5.2E-71 T 29-03-2018 IPR015168 SsuA/THI5-like AL539_RS22150 ba3db6e36fb87e612b79da542226093c 316 Gene3D G3DSA:3.40.190.10 135 315 5.8E-25 T 29-03-2018 AL539_RS22150 ba3db6e36fb87e612b79da542226093c 316 SUPERFAMILY SSF53850 29 311 2.7E-49 T 29-03-2018 AL539_RS21060 91765fc4956e4d669d5904077dbb2ece 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 49 526 6.5E-145 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS24045 7e7df0515c7342fe58733d60e8f89b94 84 Gene3D G3DSA:1.20.5.190 28 79 2.5E-13 T 29-03-2018 AL539_RS24045 7e7df0515c7342fe58733d60e8f89b94 84 SUPERFAMILY SSF58042 29 83 2.22E-16 T 29-03-2018 AL539_RS24045 7e7df0515c7342fe58733d60e8f89b94 84 PIRSF PIRSF002855 1 84 1.2E-31 T 29-03-2018 IPR016367 Murein-lipoprotein AL539_RS24045 7e7df0515c7342fe58733d60e8f89b94 84 Pfam PF04728 Lipoprotein leucine-zipper 32 84 1.5E-24 T 29-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AL539_RS20875 f73958c99dc8a367d6114e36eaffbd95 382 Gene3D G3DSA:3.90.1150.10 1 56 7.6E-4 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS20875 f73958c99dc8a367d6114e36eaffbd95 382 Gene3D G3DSA:3.40.640.10 57 282 1.2E-39 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS20875 f73958c99dc8a367d6114e36eaffbd95 382 SUPERFAMILY SSF53383 3 380 1.69E-89 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS20875 f73958c99dc8a367d6114e36eaffbd95 382 Gene3D G3DSA:3.90.1150.10 283 381 3.6E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS20875 f73958c99dc8a367d6114e36eaffbd95 382 Pfam PF00155 Aminotransferase class I and II 26 375 1.8E-31 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 Pfam PF00308 Bacterial dnaA protein 134 350 2.5E-98 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:3.40.50.300 130 297 5.1E-23 T 29-03-2018 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 SMART SM00760 376 445 3.4E-45 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 Pfam PF11638 DnaA N-terminal domain 4 65 7.8E-20 T 29-03-2018 IPR024633 DnaA N-terminal domain AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:1.10.1750.10 371 467 1.5E-36 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 SMART SM00382 165 378 4.7E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 SUPERFAMILY SSF52540 133 344 5.35E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.591 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 29-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:1.10.8.60 299 370 4.5E-29 T 29-03-2018 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.5E-187 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL539_RS12260 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL539_RS14550 49300cdbde40c330897d1e48378a5d20 597 SUPERFAMILY SSF56601 259 588 5.8E-91 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS14550 49300cdbde40c330897d1e48378a5d20 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 1.2E-76 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL539_RS14550 49300cdbde40c330897d1e48378a5d20 597 SUPERFAMILY SSF56519 87 258 8.24E-46 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL539_RS14550 49300cdbde40c330897d1e48378a5d20 597 Gene3D G3DSA:3.40.710.10 260 597 1.7E-83 T 29-03-2018 AL539_RS14550 49300cdbde40c330897d1e48378a5d20 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 2.5E-20 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL539_RS14550 49300cdbde40c330897d1e48378a5d20 597 Gene3D G3DSA:3.90.1310.10 60 259 1.2E-45 T 29-03-2018 AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 547 41.657 T 29-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 SUPERFAMILY SSF52540 74 361 3.98E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 Gene3D G3DSA:3.40.50.300 1 224 6.5E-58 T 29-03-2018 AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 Pfam PF00270 DEAD/DEAH box helicase 30 196 2.2E-50 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 SMART SM00490 259 340 1.3E-34 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 Gene3D G3DSA:3.40.50.300 225 485 4.6E-46 T 29-03-2018 AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.7E-30 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 Pfam PF03880 DbpA RNA binding domain 475 542 5.8E-16 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL539_RS25555 8cb15907b5b11de76de460ea3782d91c 643 SMART SM00487 25 223 2.7E-62 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS06130 798f4290a3093048f40aa8b19a8af307 286 Pfam PF03466 LysR substrate binding domain 89 285 3.6E-27 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS06130 798f4290a3093048f40aa8b19a8af307 286 SUPERFAMILY SSF46785 4 89 1.07E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06130 798f4290a3093048f40aa8b19a8af307 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.4E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS06130 798f4290a3093048f40aa8b19a8af307 286 SUPERFAMILY SSF53850 89 286 4.52E-30 T 29-03-2018 AL539_RS06130 798f4290a3093048f40aa8b19a8af307 286 Gene3D G3DSA:3.40.190.10 180 256 2.4E-15 T 29-03-2018 AL539_RS06130 798f4290a3093048f40aa8b19a8af307 286 Gene3D G3DSA:3.40.190.10 93 179 4.5E-4 T 29-03-2018 AL539_RS06130 798f4290a3093048f40aa8b19a8af307 286 Gene3D G3DSA:1.10.10.10 1 92 1.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 Gene3D G3DSA:1.10.10.10 118 218 6.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 4.8E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 4.8E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 4.8E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 214 5.7E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 SUPERFAMILY SSF46894 144 216 4.08E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 SMART SM00421 157 214 4.8E-24 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS24155 916e9452bc62bfa7781ace7a013d6cbc 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS08985 5804a20bf2b2d67d7b3f7ccfa839a63c 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 231 1.8E-5 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL539_RS08985 5804a20bf2b2d67d7b3f7ccfa839a63c 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 4.6E-28 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL539_RS08985 5804a20bf2b2d67d7b3f7ccfa839a63c 267 SUPERFAMILY SSF101386 138 240 5.42E-24 T 29-03-2018 AL539_RS08985 5804a20bf2b2d67d7b3f7ccfa839a63c 267 Gene3D G3DSA:1.10.287.1080 140 266 2.9E-26 T 29-03-2018 AL539_RS08985 5804a20bf2b2d67d7b3f7ccfa839a63c 267 Gene3D G3DSA:1.10.287.1080 4 123 5.6E-40 T 29-03-2018 AL539_RS08985 5804a20bf2b2d67d7b3f7ccfa839a63c 267 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 4.4E-104 T 29-03-2018 IPR011551 NTP pyrophosphohydrolase MazG AL539_RS08985 5804a20bf2b2d67d7b3f7ccfa839a63c 267 SUPERFAMILY SSF101386 3 105 6.54E-26 T 29-03-2018 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 3.7E-13 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 SUPERFAMILY SSF52540 4 183 3.62E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 Gene3D G3DSA:3.40.50.300 2 280 5.6E-34 T 29-03-2018 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 Pfam PF07670 Nucleoside recognition 509 691 1.2E-36 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 29-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 9.5E-181 T 29-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AL539_RS16835 da7ab04533ecf10ce46caf79d69223bf 758 Pfam PF02421 Ferrous iron transport protein B 4 161 8.6E-59 T 29-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 SUPERFAMILY SSF48600 4 88 6.78E-24 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 Gene3D G3DSA:1.20.59.10 2 91 2.6E-26 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 Pfam PF02153 Prephenate dehydrogenase 136 345 1.1E-30 T 29-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.9E-42 T 29-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 Gene3D G3DSA:1.10.3660.10 249 372 3.1E-30 T 29-03-2018 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 Pfam PF01817 Chorismate mutase type II 9 87 2.1E-21 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 SUPERFAMILY SSF48179 241 366 7.71E-40 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 PIRSF PIRSF001499 1 374 9.4E-184 T 29-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 SUPERFAMILY SSF51735 91 237 1.65E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 Gene3D G3DSA:3.40.50.720 92 247 1.4E-20 T 29-03-2018 AL539_RS15015 b0e62f7fac5dc1545d8ae95c46f47211 375 SMART SM00830 9 89 3.2E-29 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL539_RS07415 350c24c6fce0df42acdb52a661a792d9 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 11 102 2.7E-19 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS07415 350c24c6fce0df42acdb52a661a792d9 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 1.0E-28 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS07415 350c24c6fce0df42acdb52a661a792d9 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.2E-12 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS07415 350c24c6fce0df42acdb52a661a792d9 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.2E-12 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS07415 350c24c6fce0df42acdb52a661a792d9 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.2E-12 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS07415 350c24c6fce0df42acdb52a661a792d9 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.657 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS12750 405e31478401679fe62032b5816931b2 353 PIRSF PIRSF001415 2 336 7.7E-153 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 SUPERFAMILY SSF51569 7 335 1.08E-145 T 29-03-2018 AL539_RS12750 405e31478401679fe62032b5816931b2 353 Gene3D G3DSA:3.20.20.70 1 337 1.7E-154 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS12750 405e31478401679fe62032b5816931b2 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 29-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 SMART SM01004 9 333 4.0E-246 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS12750 405e31478401679fe62032b5816931b2 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.9E-142 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL539_RS18105 b14ef6f8c5b5a01d955812001756f6d7 445 SUPERFAMILY SSF55073 277 432 3.14E-42 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS18105 b14ef6f8c5b5a01d955812001756f6d7 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 271 429 1.5E-42 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18105 b14ef6f8c5b5a01d955812001756f6d7 445 SMART SM00267 261 433 1.7E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18105 b14ef6f8c5b5a01d955812001756f6d7 445 Gene3D G3DSA:3.30.70.270 261 436 6.8E-50 T 29-03-2018 AL539_RS18105 b14ef6f8c5b5a01d955812001756f6d7 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 273 427 7.3E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 Gene3D G3DSA:1.20.1560.10 3 328 9.7E-70 T 29-03-2018 AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 7.6E-243 T 29-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 Gene3D G3DSA:3.40.50.300 329 580 3.3E-79 T 29-03-2018 AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 Pfam PF00005 ABC transporter 359 509 2.3E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 SMART SM00382 368 555 1.1E-19 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 SUPERFAMILY SSF52540 331 580 1.02E-93 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 Pfam PF00664 ABC transporter transmembrane region 28 293 5.4E-57 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS17450 d236d874f3996b71cb1d6f387d153333 582 SUPERFAMILY SSF90123 14 327 3.92E-76 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS06825 3a62ab958904c82a74cf447030e8f5fa 442 SUPERFAMILY SSF47226 324 432 8.24E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS06825 3a62ab958904c82a74cf447030e8f5fa 442 Pfam PF01627 Hpt domain 346 422 4.5E-10 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS06825 3a62ab958904c82a74cf447030e8f5fa 442 Gene3D G3DSA:1.20.120.160 318 432 2.7E-15 T 29-03-2018 AL539_RS08955 7cf1604e7c6f733a14f7c8525afe9a1f 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 4.4E-23 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08955 7cf1604e7c6f733a14f7c8525afe9a1f 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 3.9E-42 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08955 7cf1604e7c6f733a14f7c8525afe9a1f 347 SUPERFAMILY SSF55120 6 339 8.2E-98 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08955 7cf1604e7c6f733a14f7c8525afe9a1f 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.952 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08955 7cf1604e7c6f733a14f7c8525afe9a1f 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 29-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AL539_RS08955 7cf1604e7c6f733a14f7c8525afe9a1f 347 Gene3D G3DSA:3.30.2340.10 170 303 6.7E-27 T 29-03-2018 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF53738 301 443 1.84E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.30.310.50 457 563 1.2E-22 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 309 2.2E-24 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.40.120.10 14 209 6.4E-62 T 29-03-2018 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.40.120.10 210 332 7.6E-32 T 29-03-2018 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF53738 28 231 3.81E-45 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 5.0E-18 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF53738 203 311 2.75E-21 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 5.1E-8 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 5.1E-8 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 5.1E-8 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 8.8E-42 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 478 531 3.0E-8 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF55957 432 555 9.94E-16 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.40.120.10 333 442 3.9E-36 T 29-03-2018 AL539_RS25040 434a383a52630d326a52df10c8dff6ea 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS21460 ed2cb420800a3a9b15610506e3ca111f 398 SUPERFAMILY SSF117143 73 359 1.31E-79 T 29-03-2018 AL539_RS21460 ed2cb420800a3a9b15610506e3ca111f 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 5.7E-25 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AL539_RS21460 ed2cb420800a3a9b15610506e3ca111f 398 Gene3D G3DSA:2.60.98.20 144 280 1.7E-34 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AL539_RS21460 ed2cb420800a3a9b15610506e3ca111f 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 3.9E-94 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS21460 ed2cb420800a3a9b15610506e3ca111f 398 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS21460 ed2cb420800a3a9b15610506e3ca111f 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 1.8E-17 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS23765 5469831aad5cbf69508cdfbc2eba02c5 148 SUPERFAMILY SSF55961 2 146 4.4E-18 T 29-03-2018 AL539_RS23765 5469831aad5cbf69508cdfbc2eba02c5 148 Gene3D G3DSA:3.30.530.20 2 148 5.0E-15 T 29-03-2018 IPR023393 START-like domain AL539_RS23765 5469831aad5cbf69508cdfbc2eba02c5 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 78 2.4E-5 T 29-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.2E-10 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.2E-10 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.2E-10 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 SMART SM01130 4 293 3.4E-96 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 PIRSF PIRSF001365 1 301 3.9E-85 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 7.5E-61 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 Gene3D G3DSA:3.20.20.70 1 303 1.9E-80 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS02505 22694b1802143b1ab0e381550aa6c9bc 304 SUPERFAMILY SSF51569 3 291 2.51E-85 T 29-03-2018 AL539_RS06560 6bf8240275a3081dd6a1ccd06b8770d9 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 2.2E-37 T 29-03-2018 IPR000160 GGDEF domain AL539_RS06560 6bf8240275a3081dd6a1ccd06b8770d9 486 SUPERFAMILY SSF55073 337 486 6.12E-36 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS06560 6bf8240275a3081dd6a1ccd06b8770d9 486 Gene3D G3DSA:3.30.450.20 223 257 0.0015 T 29-03-2018 AL539_RS06560 6bf8240275a3081dd6a1ccd06b8770d9 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 2.1E-42 T 29-03-2018 IPR000160 GGDEF domain AL539_RS06560 6bf8240275a3081dd6a1ccd06b8770d9 486 SMART SM00267 321 486 7.7E-40 T 29-03-2018 IPR000160 GGDEF domain AL539_RS06560 6bf8240275a3081dd6a1ccd06b8770d9 486 Gene3D G3DSA:3.30.70.270 325 486 8.2E-42 T 29-03-2018 AL539_RS06560 6bf8240275a3081dd6a1ccd06b8770d9 486 Gene3D G3DSA:3.30.450.20 25 222 5.3E-5 T 29-03-2018 AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.863 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 Gene3D G3DSA:2.140.10.10 30 187 1.5E-29 T 29-03-2018 AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 Pfam PF13360 PQQ-like domain 76 310 2.3E-50 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 63 94 7.2E-7 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 106 138 0.001 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 322 353 0.08 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 191 223 330.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 280 312 45.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 147 178 0.31 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 243 274 80.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 Gene3D G3DSA:2.140.10.10 213 382 1.1E-22 T 29-03-2018 AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 SUPERFAMILY SSF50998 32 375 1.83E-80 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL539_RS15370 e9b646f3ab468c61448faed37fd4e3a0 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 9.1E-141 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB AL539_RS25735 12e67121675010344e419de985be7772 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL539_RS25735 12e67121675010344e419de985be7772 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 260 7.8E-57 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL539_RS25735 12e67121675010344e419de985be7772 261 SUPERFAMILY SSF52096 4 261 3.2E-77 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS25735 12e67121675010344e419de985be7772 261 Gene3D G3DSA:1.10.12.10 219 261 4.0E-20 T 29-03-2018 IPR014748 Crontonase, C-terminal AL539_RS25735 12e67121675010344e419de985be7772 261 Gene3D G3DSA:3.90.226.10 7 218 1.7E-60 T 29-03-2018 AL539_RS04390 418b9c341664e77034121fa672129777 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 8.4E-50 T 29-03-2018 IPR012672 Type III secretion system YscX AL539_RS04390 418b9c341664e77034121fa672129777 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 5.5E-45 T 29-03-2018 IPR012672 Type III secretion system YscX AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 Pfam PF05746 DALR anticodon binding domain 580 677 4.2E-10 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 6.2E-206 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.971 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 5.0E-297 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 SUPERFAMILY SSF109604 351 489 6.59E-12 T 29-03-2018 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12310 c9f04a34a981455c75a6fbdcce044b4a 688 Gene3D G3DSA:1.10.730.10 573 683 4.2E-14 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 PIRSF PIRSF002599 1 72 1.0E-22 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 SMART SM00357 3 67 4.3E-25 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 Gene3D G3DSA:2.40.50.140 1 72 3.7E-26 T 29-03-2018 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 SUPERFAMILY SSF50249 1 67 6.0E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 9.6E-41 T 29-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.0E-28 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS17600 4a1fab5c7d11511cfcd9541fd6426540 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 29-03-2018 IPR019844 Cold-shock conserved site AL539_RS13995 ce194328ba2354f23294cbd8ca74f229 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-39 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS13995 ce194328ba2354f23294cbd8ca74f229 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.052 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL539_RS13995 ce194328ba2354f23294cbd8ca74f229 200 Gene3D G3DSA:3.20.19.10 1 176 5.2E-50 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS13995 ce194328ba2354f23294cbd8ca74f229 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 4.3E-98 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL539_RS13995 ce194328ba2354f23294cbd8ca74f229 200 SUPERFAMILY SSF52016 1 196 1.55E-60 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 SUPERFAMILY SSF53850 89 287 2.71E-28 T 29-03-2018 AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 Gene3D G3DSA:3.40.190.10 177 261 6.7E-16 T 29-03-2018 AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 Gene3D G3DSA:3.40.190.10 83 176 2.6E-12 T 29-03-2018 AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 Gene3D G3DSA:1.10.10.10 4 82 1.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 Pfam PF03466 LysR substrate binding domain 94 288 3.5E-26 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 SUPERFAMILY SSF46785 3 84 3.33E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 9.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.7E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.7E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21535 771415b7a5584f15ab6619a7059fd76a 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.7E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS17490 82e19068cad37fc12b9eb015986e87fd 166 SUPERFAMILY SSF116960 1 166 2.75E-66 T 29-03-2018 AL539_RS17490 82e19068cad37fc12b9eb015986e87fd 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-91 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL539_RS17490 82e19068cad37fc12b9eb015986e87fd 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 38.446 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL539_RS17490 82e19068cad37fc12b9eb015986e87fd 166 Pfam PF03887 YfbU domain 1 166 8.2E-71 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL539_RS17490 82e19068cad37fc12b9eb015986e87fd 166 PIRSF PIRSF006272 1 166 1.5E-79 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL539_RS17490 82e19068cad37fc12b9eb015986e87fd 166 Gene3D G3DSA:1.10.3190.10 54 166 6.9E-43 T 29-03-2018 IPR023146 YfbU, alpha-helical bundle domain AL539_RS17490 82e19068cad37fc12b9eb015986e87fd 166 Gene3D G3DSA:1.10.287.680 2 51 6.1E-25 T 29-03-2018 IPR023145 YfbU, helix-hairpin domain AL539_RS19865 57ee74e3ed81ef97cf3c4d3e0cafba38 158 Pfam PF01899 Na+/H+ ion antiporter subunit 8 155 1.0E-38 T 29-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AL539_RS19865 57ee74e3ed81ef97cf3c4d3e0cafba38 158 PIRSF PIRSF019239 1 158 2.7E-42 T 29-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 785 6.1E-169 T 29-03-2018 AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 610 5.9E-22 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 Pfam PF17092 Penicillin-binding protein OB-like domain 317 434 3.4E-33 T 29-03-2018 IPR031376 Penicillin-binding protein, OB-like domain AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 Pfam PF00912 Transglycosylase 55 229 1.9E-63 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 SUPERFAMILY SSF56601 432 620 2.82E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 SUPERFAMILY SSF56601 211 233 2.82E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 SUPERFAMILY SSF56601 262 314 2.82E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 SUPERFAMILY SSF56601 666 835 2.82E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 SUPERFAMILY SSF53955 43 256 2.7E-78 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 Gene3D G3DSA:1.10.3810.10 47 246 1.8E-80 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 Gene3D G3DSA:3.40.710.10 425 802 3.3E-90 T 29-03-2018 AL539_RS10310 51fe1fc646303347300c8ef7055fc3c5 853 Gene3D G3DSA:2.40.50.140 349 424 2.4E-26 T 29-03-2018 AL539_RS02330 cd84b08ba5ab5c19a5c7004c62fa29bd 293 Pfam PF03547 Membrane transport protein 152 284 7.1E-7 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL539_RS17970 417bec214392a6f3f2d0277b8039e170 126 Pfam PF00031 Cystatin domain 47 108 3.3E-5 T 29-03-2018 IPR000010 Cystatin domain GO:0004869 AL539_RS17970 417bec214392a6f3f2d0277b8039e170 126 SUPERFAMILY SSF54403 42 112 1.29E-13 T 29-03-2018 AL539_RS17970 417bec214392a6f3f2d0277b8039e170 126 Gene3D G3DSA:3.10.450.10 41 122 4.9E-9 T 29-03-2018 AL539_RS08275 3b51d8bfea5152e068388d68ca9d9684 326 Gene3D G3DSA:3.40.50.1000 165 310 3.2E-24 T 29-03-2018 IPR023214 HAD-like domain AL539_RS08275 3b51d8bfea5152e068388d68ca9d9684 326 SUPERFAMILY SSF56784 107 310 3.25E-49 T 29-03-2018 IPR023214 HAD-like domain AL539_RS08275 3b51d8bfea5152e068388d68ca9d9684 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 2.9E-14 T 29-03-2018 AL539_RS08275 3b51d8bfea5152e068388d68ca9d9684 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 9.5E-28 T 29-03-2018 AL539_RS08275 3b51d8bfea5152e068388d68ca9d9684 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 2.0E-84 T 29-03-2018 AL539_RS08275 3b51d8bfea5152e068388d68ca9d9684 326 Gene3D G3DSA:1.10.150.210 130 164 1.3E-25 T 29-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AL539_RS08275 3b51d8bfea5152e068388d68ca9d9684 326 Gene3D G3DSA:3.30.70.260 86 129 1.2E-5 T 29-03-2018 AL539_RS22120 07bb7ad39532b99e590c62e946e4c566 199 SUPERFAMILY SSF75217 1 198 1.44E-67 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS22120 07bb7ad39532b99e590c62e946e4c566 199 Gene3D G3DSA:3.40.1280.10 1 198 2.1E-29 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS22120 07bb7ad39532b99e590c62e946e4c566 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 1.3E-66 T 29-03-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL539_RS22120 07bb7ad39532b99e590c62e946e4c566 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 28.202 T 29-03-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 SUPERFAMILY SSF52540 39 265 8.38E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 Gene3D G3DSA:3.10.580.10 290 395 2.8E-4 T 29-03-2018 AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 SUPERFAMILY SSF54631 275 391 1.01E-8 T 29-03-2018 AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 SMART SM00382 54 243 1.8E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 Pfam PF00005 ABC transporter 45 193 1.6E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 Gene3D G3DSA:3.40.50.300 1 289 1.9E-73 T 29-03-2018 AL539_RS21240 baa32dccb67187a0792897f61d668b6d 409 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 393 1.1E-121 T 29-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AL539_RS22035 f5b1e0b32181bfa4a973196c3deddc1e 697 Gene3D G3DSA:2.170.130.10 19 158 1.5E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS22035 f5b1e0b32181bfa4a973196c3deddc1e 697 SUPERFAMILY SSF56935 20 697 1.12E-118 T 29-03-2018 AL539_RS22035 f5b1e0b32181bfa4a973196c3deddc1e 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 696 1.8E-92 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS22035 f5b1e0b32181bfa4a973196c3deddc1e 697 Pfam PF00593 TonB dependent receptor 237 696 3.7E-50 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS22035 f5b1e0b32181bfa4a973196c3deddc1e 697 Gene3D G3DSA:2.40.170.20 159 697 1.9E-69 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS22035 f5b1e0b32181bfa4a973196c3deddc1e 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 150 1.5E-16 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS15770 e9d596907f3b6975a9c7d8c83ff872d3 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 37 3.9E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS15770 e9d596907f3b6975a9c7d8c83ff872d3 143 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 38 122 1.6E-14 T 29-03-2018 IPR031982 Type IV minor pilin ComP AL539_RS15770 e9d596907f3b6975a9c7d8c83ff872d3 143 Gene3D G3DSA:3.30.700.10 18 142 9.7E-19 T 29-03-2018 AL539_RS15770 e9d596907f3b6975a9c7d8c83ff872d3 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 2.2E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS15770 e9d596907f3b6975a9c7d8c83ff872d3 143 SUPERFAMILY SSF54523 17 137 1.46E-17 T 29-03-2018 AL539_RS15770 e9d596907f3b6975a9c7d8c83ff872d3 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 Pfam PF10502 Signal peptidase, peptidase S26 217 269 8.9E-8 T 29-03-2018 IPR019533 Peptidase S26 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 1.2E-47 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 Gene3D G3DSA:2.10.109.10 76 295 5.5E-55 T 29-03-2018 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.4E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.4E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 4.4E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 Pfam PF00717 Peptidase S24-like 86 162 9.3E-22 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 SUPERFAMILY SSF51306 78 298 4.71E-70 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_RS09040 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 29-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AL539_RS01115 d4300840a871e707e75a82d19a87bb23 74 SUPERFAMILY SSF54292 8 74 5.64E-18 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS01115 d4300840a871e707e75a82d19a87bb23 74 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 27 35 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL539_RS01115 d4300840a871e707e75a82d19a87bb23 74 Gene3D G3DSA:3.10.20.30 2 74 4.6E-14 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS01115 d4300840a871e707e75a82d19a87bb23 74 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 66 3.2E-9 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS23885 46895ac177b47bef1f7fca5d3debaca1 367 SUPERFAMILY SSF82861 97 179 9.55E-15 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL539_RS23885 46895ac177b47bef1f7fca5d3debaca1 367 SUPERFAMILY SSF82689 252 351 1.12E-17 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL539_RS23885 46895ac177b47bef1f7fca5d3debaca1 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL539_RS23885 46895ac177b47bef1f7fca5d3debaca1 367 Gene3D G3DSA:3.30.70.100 249 347 2.4E-17 T 29-03-2018 AL539_RS23885 46895ac177b47bef1f7fca5d3debaca1 367 Pfam PF00924 Mechanosensitive ion channel 138 341 1.5E-55 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL539_RS23885 46895ac177b47bef1f7fca5d3debaca1 367 SUPERFAMILY SSF50182 180 247 4.58E-18 T 29-03-2018 IPR010920 LSM domain AL539_RS23885 46895ac177b47bef1f7fca5d3debaca1 367 Gene3D G3DSA:2.30.30.60 196 248 3.9E-15 T 29-03-2018 AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 162 7.3E-14 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 Gene3D G3DSA:1.10.287.950 54 437 1.3E-4 T 29-03-2018 AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 Gene3D G3DSA:1.10.287.950 438 666 2.8E-48 T 29-03-2018 AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 SMART SM00283 403 664 8.9E-61 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 SMART SM00304 335 388 2.3E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 SUPERFAMILY SSF58104 361 665 1.11E-65 T 29-03-2018 AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 628 2.3E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS25185 7778eca0f776234cafc5056912eb85f7 666 Pfam PF00672 HAMP domain 337 379 5.9E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS04760 f45d949407a9bc6857e6f293d1a7d74a 187 Pfam PF12464 Maltose acetyltransferase 6 57 1.2E-13 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL539_RS04760 f45d949407a9bc6857e6f293d1a7d74a 187 Gene3D G3DSA:2.160.10.10 1 187 1.2E-47 T 29-03-2018 AL539_RS04760 f45d949407a9bc6857e6f293d1a7d74a 187 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 2.3E-10 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS04760 f45d949407a9bc6857e6f293d1a7d74a 187 SUPERFAMILY SSF51161 2 183 3.88E-50 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS04760 f45d949407a9bc6857e6f293d1a7d74a 187 SMART SM01266 4 58 3.9E-20 T 29-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL539_RS05670 c222bae04f01dbc3c773b21f73154a7d 213 Pfam PF13505 Outer membrane protein beta-barrel domain 10 176 8.8E-13 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS05670 c222bae04f01dbc3c773b21f73154a7d 213 Gene3D G3DSA:2.40.128.130 27 88 3.9E-5 T 29-03-2018 AL539_RS05670 c222bae04f01dbc3c773b21f73154a7d 213 Gene3D G3DSA:2.40.160.20 89 213 3.8E-8 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS05670 c222bae04f01dbc3c773b21f73154a7d 213 SUPERFAMILY SSF56925 33 176 6.02E-18 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 Pfam PF00107 Zinc-binding dehydrogenase 208 336 2.2E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 9.3E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 Gene3D G3DSA:3.90.180.10 2 198 8.8E-60 T 29-03-2018 AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 1.5E-229 T 29-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 SUPERFAMILY SSF50129 329 379 4.19E-11 T 29-03-2018 IPR011032 GroES-like AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 SUPERFAMILY SSF51735 171 345 1.6E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 SUPERFAMILY SSF50129 10 196 3.83E-72 T 29-03-2018 IPR011032 GroES-like AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 SMART SM00829 23 378 7.4E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS22350 6375e61c69276491a29e72dc792f34ae 382 Gene3D G3DSA:3.40.50.720 199 321 9.0E-27 T 29-03-2018 AL539_RS24215 d73be5a35a29da1f5d8f6548a02b3905 217 Gene3D G3DSA:3.30.70.1450 137 215 8.8E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS24215 d73be5a35a29da1f5d8f6548a02b3905 217 Gene3D G3DSA:3.40.50.720 2 136 3.7E-24 T 29-03-2018 AL539_RS24215 d73be5a35a29da1f5d8f6548a02b3905 217 Pfam PF02254 TrkA-N domain 5 119 1.2E-23 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS24215 d73be5a35a29da1f5d8f6548a02b3905 217 SUPERFAMILY SSF51735 3 133 9.63E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS24215 d73be5a35a29da1f5d8f6548a02b3905 217 SUPERFAMILY SSF116726 134 213 4.58E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 1.6E-11 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 SUPERFAMILY SSF50129 2 145 5.33E-44 T 29-03-2018 IPR011032 GroES-like AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 SUPERFAMILY SSF51735 116 289 1.67E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 Gene3D G3DSA:3.40.50.720 158 293 8.5E-19 T 29-03-2018 AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 SMART SM00829 13 324 2.4E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.6E-5 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.1E-139 T 29-03-2018 IPR014188 Acrylyl-CoA reductase AcuI AL539_RS12345 4e59e2b3c0009ef9207c42a1a283a115 326 Gene3D G3DSA:3.90.180.10 1 157 4.1E-32 T 29-03-2018 AL539_RS09840 6920cb9d8301983ec84ab47728a7ed7b 137 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.881 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B AL539_RS09840 6920cb9d8301983ec84ab47728a7ed7b 137 Gene3D G3DSA:3.30.70.970 10 123 1.8E-44 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AL539_RS09840 6920cb9d8301983ec84ab47728a7ed7b 137 SUPERFAMILY SSF89946 8 126 2.35E-39 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AL539_RS09840 6920cb9d8301983ec84ab47728a7ed7b 137 PIRSF PIRSF018193 8 137 4.0E-58 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B AL539_RS09840 6920cb9d8301983ec84ab47728a7ed7b 137 Pfam PF06877 Regulator of ribonuclease activity B 18 120 1.7E-34 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AL539_RS19950 b1db0bb2b4c1ebf88b2de8a600552e21 199 Gene3D G3DSA:2.40.160.20 24 171 1.9E-9 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS19950 b1db0bb2b4c1ebf88b2de8a600552e21 199 SUPERFAMILY SSF56925 65 166 1.1E-5 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS21395 636839cf47178c3ab85471050282c9e1 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 1.2E-19 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL539_RS21395 636839cf47178c3ab85471050282c9e1 132 SUPERFAMILY SSF51316 2 131 3.03E-43 T 29-03-2018 IPR011057 Mss4-like AL539_RS21395 636839cf47178c3ab85471050282c9e1 132 Gene3D G3DSA:3.90.1590.10 1 132 1.9E-33 T 29-03-2018 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 Pfam PF12404 Peptidase 5 81 7.5E-34 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 66.035 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 2.7E-45 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 2.7E-45 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 2.7E-45 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 2.7E-45 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 2.7E-45 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 5.5E-104 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 SUPERFAMILY SSF53187 104 428 1.98E-101 T 29-03-2018 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 Gene3D G3DSA:3.40.630.10 93 432 4.2E-112 T 29-03-2018 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 PIRSF PIRSF036388 1 432 2.4E-225 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL539_RS15335 6d2969a8041d797369ba503af871425b 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL539_RS06205 e203252120b9a321ff62e5f997e0ae5c 171 Gene3D G3DSA:3.40.30.10 33 167 9.6E-19 T 29-03-2018 AL539_RS06205 e203252120b9a321ff62e5f997e0ae5c 171 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL539_RS06205 e203252120b9a321ff62e5f997e0ae5c 171 Pfam PF00085 Thioredoxin 52 159 2.1E-11 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL539_RS06205 e203252120b9a321ff62e5f997e0ae5c 171 SUPERFAMILY SSF52833 41 162 5.84E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS15290 76ea85b5d22176a4ba87555136fe5159 239 SUPERFAMILY SSF75217 5 175 4.32E-37 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS15290 76ea85b5d22176a4ba87555136fe5159 239 Gene3D G3DSA:3.40.1280.10 1 165 1.7E-41 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS15290 76ea85b5d22176a4ba87555136fe5159 239 PIRSF PIRSF004808 1 239 1.5E-72 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL539_RS15290 76ea85b5d22176a4ba87555136fe5159 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.5E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL539_RS15290 76ea85b5d22176a4ba87555136fe5159 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 8.4E-84 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 Gene3D G3DSA:1.10.10.10 125 220 2.3E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 Pfam PF00072 Response regulator receiver domain 6 112 5.7E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 SMART SM00862 147 218 1.4E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 1.6E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 SUPERFAMILY SSF46894 124 218 1.9E-29 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 Gene3D G3DSA:3.40.50.2300 3 124 2.4E-23 T 29-03-2018 AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 SMART SM00448 3 111 1.8E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS18435 4a1569b7a91b27cc753200ef06ad259e 220 SUPERFAMILY SSF52172 4 118 1.11E-27 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Gene3D G3DSA:2.40.30.10 206 299 9.8E-31 T 29-03-2018 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.6E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 SUPERFAMILY SSF52540 6 219 8.3E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Gene3D G3DSA:3.40.50.300 75 203 1.1E-31 T 29-03-2018 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Gene3D G3DSA:2.40.30.10 300 393 3.3E-33 T 29-03-2018 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.2E-230 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.563 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Gene3D G3DSA:3.40.50.300 2 74 1.6E-11 T 29-03-2018 AL539_RS11230 05b94e10c0d13e0059d5f408ccbfe860 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.6E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Gene3D G3DSA:3.40.630.40 162 395 1.5E-54 T 29-03-2018 AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Pfam PF11741 AMIN domain 34 135 2.2E-16 T 29-03-2018 IPR021731 AMIN domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Gene3D G3DSA:3.10.350.10 522 569 9.3E-13 T 29-03-2018 AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Pfam PF01476 LysM domain 525 567 1.5E-12 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Pfam PF01476 LysM domain 472 514 6.4E-12 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Pfam PF01476 LysM domain 409 451 1.1E-13 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 167 387 1.1E-49 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SMART SM00646 228 387 3.3E-63 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SUPERFAMILY SSF54106 407 451 4.45E-10 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SUPERFAMILY SSF54106 524 567 4.97E-10 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SMART SM00257 408 451 1.2E-14 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SMART SM00257 524 567 1.8E-14 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SMART SM00257 471 514 9.5E-15 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SUPERFAMILY SSF54106 469 514 6.02E-10 T 29-03-2018 IPR018392 LysM domain AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Gene3D G3DSA:3.10.350.10 466 521 7.4E-12 T 29-03-2018 AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 Gene3D G3DSA:3.10.350.10 401 465 1.1E-12 T 29-03-2018 AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SUPERFAMILY SSF53187 314 390 5.34E-53 T 29-03-2018 AL539_RS10665 782f3b4fc121fb5fdefd6e9854bf13c8 569 SUPERFAMILY SSF53187 165 262 5.34E-53 T 29-03-2018 AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 Gene3D G3DSA:3.90.1150.10 17 99 2.2E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 Gene3D G3DSA:3.90.1150.10 293 463 1.1E-74 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 Pfam PF01212 Beta-eliminating lyase 46 431 2.3E-98 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 Gene3D G3DSA:3.40.640.10 100 292 7.6E-6 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 106.564 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 SUPERFAMILY SSF53383 2 465 1.84E-145 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 29-03-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 AL539_RS21810 2d0f3fc228288493b06ccf63a79da5ef 466 PIRSF PIRSF001386 1 466 1.0E-228 T 29-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 SUPERFAMILY SSF53732 379 861 6.28E-148 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 SUPERFAMILY SSF74778 2 160 5.75E-68 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 SUPERFAMILY SSF52016 162 372 2.35E-72 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.20.19.10 162 363 3.8E-35 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.30.499.10 402 520 2.8E-11 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 5.6E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.7E-101 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.30.499.10 683 865 2.9E-51 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 PIRSF PIRSF036687 1 859 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.40.1060.10 521 682 6.1E-29 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS08610 7b5e2c1340e2fcedb39e467406456d4a 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.7E-67 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 1.3E-157 T 29-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.685 T 29-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 Gene3D G3DSA:3.40.50.150 7 252 3.4E-83 T 29-03-2018 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 Gene3D G3DSA:3.50.50.60 253 672 1.0E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 1.0E-46 T 29-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 SUPERFAMILY SSF51905 266 481 7.12E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 SUPERFAMILY SSF51905 574 663 7.12E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS07090 fdf4f6e8cdc05518e57568d6bf5b32c4 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 8.6E-45 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS16440 549512a0b4fe4c63798ea31fce448c37 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 8.5E-41 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL539_RS16440 549512a0b4fe4c63798ea31fce448c37 248 Gene3D G3DSA:3.90.1210.10 128 187 4.3E-7 T 29-03-2018 AL539_RS16440 549512a0b4fe4c63798ea31fce448c37 248 SMART SM00858 126 188 9.9E-11 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL539_RS16440 549512a0b4fe4c63798ea31fce448c37 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 2.7E-52 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL539_RS22015 1e8273eeb7dc38dcbda84d6c6d77d42f 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 5.4E-28 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL539_RS24420 5f274b8df1ae072a4e5b74e9e4a98083 563 SUPERFAMILY SSF90123 52 314 4.05E-17 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS24420 5f274b8df1ae072a4e5b74e9e4a98083 563 SMART SM00382 345 538 2.8E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24420 5f274b8df1ae072a4e5b74e9e4a98083 563 SUPERFAMILY SSF52540 334 526 1.41E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24420 5f274b8df1ae072a4e5b74e9e4a98083 563 Gene3D G3DSA:3.40.50.300 305 558 1.8E-50 T 29-03-2018 AL539_RS24420 5f274b8df1ae072a4e5b74e9e4a98083 563 Pfam PF00005 ABC transporter 337 485 3.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24420 5f274b8df1ae072a4e5b74e9e4a98083 563 Gene3D G3DSA:1.20.1560.10 14 304 6.0E-18 T 29-03-2018 AL539_RS24420 5f274b8df1ae072a4e5b74e9e4a98083 563 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS02575 0df2ae098be1054daffe339db7287ef4 376 SUPERFAMILY SSF51182 56 374 7.23E-92 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS02575 0df2ae098be1054daffe339db7287ef4 376 Gene3D G3DSA:2.60.120.10 161 352 1.2E-43 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS02575 0df2ae098be1054daffe339db7287ef4 376 Pfam PF04209 homogentisate 1,2-dioxygenase 84 374 3.1E-22 T 29-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AL539_RS02575 0df2ae098be1054daffe339db7287ef4 376 Gene3D G3DSA:2.60.120.10 19 160 2.4E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 Pfam PF00425 chorismate binding enzyme 191 444 4.5E-98 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 2.5E-28 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 3.6E-121 T 29-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 Gene3D G3DSA:3.60.120.10 2 454 7.2E-155 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AL539_RS05590 bc1c05725217266965e163a30cf63c80 454 SUPERFAMILY SSF56322 11 453 1.57E-142 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AL539_RS04265 ea169ee4d1e36bd5fd5845ff8fa82178 481 SUPERFAMILY SSF55811 32 163 4.6E-21 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS04265 ea169ee4d1e36bd5fd5845ff8fa82178 481 Gene3D G3DSA:3.90.79.10 20 163 3.5E-17 T 29-03-2018 AL539_RS04265 ea169ee4d1e36bd5fd5845ff8fa82178 481 Gene3D G3DSA:1.20.144.10 164 364 8.6E-9 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS04265 ea169ee4d1e36bd5fd5845ff8fa82178 481 SUPERFAMILY SSF48317 145 354 3.4E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS04265 ea169ee4d1e36bd5fd5845ff8fa82178 481 Pfam PF00293 NUDIX domain 32 125 4.9E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS04265 ea169ee4d1e36bd5fd5845ff8fa82178 481 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS12065 9edc605cae76404bcd4f781a4bd9a093 328 Pfam PF01636 Phosphotransferase enzyme family 35 264 7.2E-40 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AL539_RS12065 9edc605cae76404bcd4f781a4bd9a093 328 SUPERFAMILY SSF56112 5 328 1.9E-90 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS12065 9edc605cae76404bcd4f781a4bd9a093 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.692 T 29-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 AL539_RS12065 9edc605cae76404bcd4f781a4bd9a093 328 Gene3D G3DSA:3.90.1200.10 111 323 1.0E-21 T 29-03-2018 AL539_RS12065 9edc605cae76404bcd4f781a4bd9a093 328 Gene3D G3DSA:3.30.200.20 6 107 2.8E-18 T 29-03-2018 AL539_RS18540 1d0862bf6f29d03ec611f23b9ec802ac 227 SUPERFAMILY SSF50891 92 220 4.55E-35 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS18540 1d0862bf6f29d03ec611f23b9ec802ac 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 197 7.4E-55 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL539_RS18540 1d0862bf6f29d03ec611f23b9ec802ac 227 SMART SM00796 6 204 5.7E-60 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL539_RS18540 1d0862bf6f29d03ec611f23b9ec802ac 227 Gene3D G3DSA:2.40.100.10 90 222 5.8E-39 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS18540 1d0862bf6f29d03ec611f23b9ec802ac 227 Gene3D G3DSA:3.30.1360.40 6 85 3.3E-13 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AL539_RS18540 1d0862bf6f29d03ec611f23b9ec802ac 227 SUPERFAMILY SSF160467 8 97 1.14E-11 T 29-03-2018 AL539_RS26080 96b86407269657835e5168fe42e2e441 204 Gene3D G3DSA:1.20.1050.10 96 204 8.1E-20 T 29-03-2018 AL539_RS26080 96b86407269657835e5168fe42e2e441 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 1.5E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS26080 96b86407269657835e5168fe42e2e441 204 SUPERFAMILY SSF47616 72 203 1.06E-24 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS26080 96b86407269657835e5168fe42e2e441 204 Gene3D G3DSA:3.40.30.10 1 95 9.5E-24 T 29-03-2018 AL539_RS26080 96b86407269657835e5168fe42e2e441 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 200 7.4E-8 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL539_RS26080 96b86407269657835e5168fe42e2e441 204 SUPERFAMILY SSF52833 1 89 3.19E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 SUPERFAMILY SSF46689 7 57 2.46E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 3.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 3.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 SUPERFAMILY SSF46689 60 110 1.66E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 SUPERFAMILY SSF55136 138 286 6.54E-26 T 29-03-2018 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 SMART SM00342 23 107 3.4E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 Gene3D G3DSA:3.20.80.10 133 287 7.4E-22 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 SMART SM00871 137 287 1.4E-17 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 Gene3D G3DSA:1.10.10.60 1 60 6.3E-14 T 29-03-2018 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 Pfam PF12833 Helix-turn-helix domain 29 108 8.1E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 Gene3D G3DSA:1.10.10.60 62 121 1.1E-13 T 29-03-2018 AL539_RS20870 b17383c4ab1ab0c32b2466626a39d35d 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 2.7E-27 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 Gene3D G3DSA:1.10.10.350 369 475 1.5E-23 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 1.7E-196 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 SUPERFAMILY SSF52374 3 301 1.18E-110 T 29-03-2018 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 Gene3D G3DSA:1.10.8.70 321 363 2.5E-11 T 29-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.215 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 7.8E-117 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 Gene3D G3DSA:1.10.1160.10 235 316 1.0E-33 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 SUPERFAMILY SSF48163 302 465 1.96E-45 T 29-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 Gene3D G3DSA:3.40.50.620 124 234 2.0E-29 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16395 70fa40b6f313a6e93089726b1518ecc9 475 Gene3D G3DSA:3.40.50.620 3 123 2.0E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 846 3.7E-26 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Gene3D G3DSA:1.10.730.10 583 799 1.4E-46 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Gene3D G3DSA:3.40.50.620 42 123 3.7E-29 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Gene3D G3DSA:3.90.740.10 205 508 2.3E-98 T 29-03-2018 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.8E-219 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 SUPERFAMILY SSF50677 203 408 1.47E-54 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.52 T 29-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 1.3E-294 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Gene3D G3DSA:3.30.2320.20 807 900 1.6E-23 T 29-03-2018 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 Pfam PF06827 Zinc finger found in FPG and IleRS 902 930 6.0E-7 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 SUPERFAMILY SSF47323 657 933 1.63E-74 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 SUPERFAMILY SSF52374 408 652 4.59E-139 T 29-03-2018 AL539_RS14945 5044bd436bcd8d5bd08c377eaea72db6 942 SUPERFAMILY SSF52374 4 202 4.59E-139 T 29-03-2018 AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 Gene3D G3DSA:3.40.50.300 8 289 5.5E-57 T 29-03-2018 AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 SUPERFAMILY SSF52540 304 525 3.68E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.7E-293 T 29-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF12848 ABC transporter 230 306 4.1E-13 T 29-03-2018 IPR032781 ABC-transporter extension domain AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 SUPERFAMILY SSF52540 9 242 4.85E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 SMART SM00382 348 518 1.2E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 SMART SM00382 31 236 6.9E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF00005 ABC transporter 340 473 4.2E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF00005 ABC transporter 22 191 2.3E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS15030 41ee39a091fadcbadff9a230f98da04a 555 Gene3D G3DSA:3.40.50.300 290 548 8.8E-59 T 29-03-2018 AL539_RS18325 70293cf04df2d731fd1fbb6bc8f929bf 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 1.3E-62 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL539_RS18325 70293cf04df2d731fd1fbb6bc8f929bf 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL539_RS18325 70293cf04df2d731fd1fbb6bc8f929bf 156 Gene3D G3DSA:3.80.30.10 63 155 2.3E-11 T 29-03-2018 AL539_RS18325 70293cf04df2d731fd1fbb6bc8f929bf 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 6.6E-53 T 29-03-2018 AL539_RS18325 70293cf04df2d731fd1fbb6bc8f929bf 156 PIRSF PIRSF000368 1 156 3.5E-61 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL539_RS18325 70293cf04df2d731fd1fbb6bc8f929bf 156 SUPERFAMILY SSF102114 23 117 3.14E-8 T 29-03-2018 AL539_RS24860 837f7ea7991396facbfa4b91c6fedda1 194 Gene3D G3DSA:3.40.50.360 1 194 6.6E-32 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS24860 837f7ea7991396facbfa4b91c6fedda1 194 SUPERFAMILY SSF52218 1 192 2.19E-37 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS24860 837f7ea7991396facbfa4b91c6fedda1 194 Pfam PF02525 Flavodoxin-like fold 3 182 1.3E-35 T 29-03-2018 IPR003680 Flavodoxin-like fold AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 Gene3D G3DSA:3.40.50.300 181 431 4.3E-24 T 29-03-2018 AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 SUPERFAMILY SSF52540 188 501 1.35E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 Gene3D G3DSA:3.30.230.10 3 180 4.0E-37 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.7E-210 T 29-03-2018 IPR004482 Mg chelatase-related protein AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 6.4E-90 T 29-03-2018 IPR000523 Magnesium chelatase ChlI domain AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 SUPERFAMILY SSF54211 2 169 1.82E-30 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.4E-48 T 29-03-2018 AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 SMART SM00382 210 390 2.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS12085 1bb3e578cc67350c2e096b8de9bbea81 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 3.0E-29 T 29-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AL539_RS20895 2c805dd6ed70acdd657df3ebf86d5154 236 SUPERFAMILY SSF55681 4 232 4.57E-45 T 29-03-2018 AL539_RS20895 2c805dd6ed70acdd657df3ebf86d5154 236 Gene3D G3DSA:3.30.930.10 2 236 1.6E-23 T 29-03-2018 AL539_RS23405 84c82c414c6241e94862a9a239ed0de2 487 SUPERFAMILY SSF81296 24 203 1.68E-56 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS23405 84c82c414c6241e94862a9a239ed0de2 487 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 486 56.6 T 29-03-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 AL539_RS23405 84c82c414c6241e94862a9a239ed0de2 487 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 24 199 7.2E-36 T 29-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL539_RS23405 84c82c414c6241e94862a9a239ed0de2 487 Gene3D G3DSA:2.70.50.50 24 202 2.5E-55 T 29-03-2018 AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 Gene3D G3DSA:2.160.10.10 50 133 5.3E-12 T 29-03-2018 AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 9 329 5.1E-115 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 2.3E-9 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.6E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 Gene3D G3DSA:2.160.10.10 134 309 2.0E-44 T 29-03-2018 AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.485 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 3.1E-23 T 29-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AL539_RS07715 5d4434da5d61c59a5c9a0577315d12f8 343 SUPERFAMILY SSF51161 32 316 1.07E-82 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS12605 94e66a1e2dd0909c8c6539a96f7c4046 141 SUPERFAMILY SSF52402 3 139 1.34E-33 T 29-03-2018 AL539_RS12605 94e66a1e2dd0909c8c6539a96f7c4046 141 PIRSF PIRSF006276 1 141 4.1E-53 T 29-03-2018 IPR006015 Universal stress protein A AL539_RS12605 94e66a1e2dd0909c8c6539a96f7c4046 141 Pfam PF00582 Universal stress protein family 3 138 2.6E-21 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS12605 94e66a1e2dd0909c8c6539a96f7c4046 141 Gene3D G3DSA:3.40.50.620 2 141 2.5E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS09620 aae804bc08a5a93476672a4cc84feb3d 379 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 8.2E-78 T 29-03-2018 IPR024570 Murein transglycosylase-C, N-terminal AL539_RS09620 aae804bc08a5a93476672a4cc84feb3d 379 Gene3D G3DSA:1.10.530.10 194 377 2.1E-34 T 29-03-2018 AL539_RS09620 aae804bc08a5a93476672a4cc84feb3d 379 Pfam PF01464 Transglycosylase SLT domain 211 332 4.7E-28 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS09620 aae804bc08a5a93476672a4cc84feb3d 379 SUPERFAMILY SSF53955 206 371 4.79E-36 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS09620 aae804bc08a5a93476672a4cc84feb3d 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL539_RS16920 262933049ca045c5a4a9cde323fb849d 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 1.4E-31 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AL539_RS16920 262933049ca045c5a4a9cde323fb849d 220 SUPERFAMILY SSF63848 113 216 6.28E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AL539_RS16920 262933049ca045c5a4a9cde323fb849d 220 Gene3D G3DSA:2.160.20.70 96 219 1.6E-33 T 29-03-2018 AL539_RS16920 262933049ca045c5a4a9cde323fb849d 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.0E-32 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AL539_RS16920 262933049ca045c5a4a9cde323fb849d 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 2.0E-79 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL539_RS16920 262933049ca045c5a4a9cde323fb849d 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.227 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 SMART SM00965 180 228 7.6E-9 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 Pfam PF03958 Bacterial type II/III secretion system short domain 254 319 1.2E-12 T 29-03-2018 IPR005644 NolW-like AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 155 577 1.1E-163 T 29-03-2018 IPR013355 Type IV pilus secretin PilQ AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 542 560 7.6E-20 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 415 439 7.6E-20 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 450 460 7.6E-20 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 319 329 7.6E-20 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 565 579 7.6E-20 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 523 556 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL539_RS10285 14abd43c5eb8cc206f5dcd9655358036 579 Pfam PF00263 Bacterial type II and III secretion system protein 419 577 3.0E-46 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 SUPERFAMILY SSF54631 146 278 1.39E-28 T 29-03-2018 AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 Gene3D G3DSA:3.10.580.10 148 328 1.1E-27 T 29-03-2018 AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 SMART SM00116 232 279 1.6E-4 T 29-03-2018 IPR000644 CBS domain AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 SMART SM00116 159 215 0.011 T 29-03-2018 IPR000644 CBS domain AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 SUPERFAMILY SSF51206 7 133 1.7E-27 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 5.4E-47 T 29-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 Gene3D G3DSA:2.60.120.10 1 147 8.5E-25 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.6E-12 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 SMART SM00100 17 134 9.4E-10 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 6.0E-44 T 29-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF00571 CBS domain 225 277 4.2E-11 T 29-03-2018 IPR000644 CBS domain AL539_RS02950 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF00571 CBS domain 153 211 8.1E-8 T 29-03-2018 IPR000644 CBS domain AL539_RS04630 b3538b487bf312b46ab6b61380de5abc 471 Gene3D G3DSA:1.20.1600.10 15 452 1.4E-58 T 29-03-2018 AL539_RS04630 b3538b487bf312b46ab6b61380de5abc 471 SUPERFAMILY SSF56954 107 446 8.5E-68 T 29-03-2018 AL539_RS04630 b3538b487bf312b46ab6b61380de5abc 471 SUPERFAMILY SSF56954 4 79 8.5E-68 T 29-03-2018 AL539_RS04630 b3538b487bf312b46ab6b61380de5abc 471 Pfam PF02321 Outer membrane efflux protein 28 243 1.2E-24 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS04630 b3538b487bf312b46ab6b61380de5abc 471 Pfam PF02321 Outer membrane efflux protein 267 446 6.4E-24 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS06905 232621ee63ef07b5215c51580625bac3 146 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 21 143 4.4E-57 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL539_RS06905 232621ee63ef07b5215c51580625bac3 146 Pfam PF01641 SelR domain 25 143 7.0E-54 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL539_RS06905 232621ee63ef07b5215c51580625bac3 146 SUPERFAMILY SSF51316 19 144 1.15E-58 T 29-03-2018 IPR011057 Mss4-like AL539_RS06905 232621ee63ef07b5215c51580625bac3 146 Gene3D G3DSA:2.170.150.20 11 146 4.1E-60 T 29-03-2018 AL539_RS06905 232621ee63ef07b5215c51580625bac3 146 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 22 145 37.382 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL539_RS03445 76fe3a14b0fd563d432ce41aaeaa323e 159 SUPERFAMILY SSF54001 41 157 6.38E-40 T 29-03-2018 AL539_RS03445 76fe3a14b0fd563d432ce41aaeaa323e 159 Pfam PF00877 NlpC/P60 family 52 156 3.8E-31 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL539_RS03445 76fe3a14b0fd563d432ce41aaeaa323e 159 Gene3D G3DSA:3.90.1720.10 38 159 1.6E-36 T 29-03-2018 AL539_RS25635 e467b4fa4d38f748f914fb4de1121bfb 290 Gene3D G3DSA:3.40.630.10 5 290 3.0E-26 T 29-03-2018 AL539_RS25635 e467b4fa4d38f748f914fb4de1121bfb 290 PIRSF PIRSF018001 2 290 2.5E-54 T 29-03-2018 IPR016708 Aspartoacylase GO:0016811 AL539_RS25635 e467b4fa4d38f748f914fb4de1121bfb 290 Hamap MF_00704 Probable aspartoacylase. 2 289 28.373 T 29-03-2018 IPR016708 Aspartoacylase GO:0016811 AL539_RS25635 e467b4fa4d38f748f914fb4de1121bfb 290 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 6 284 1.1E-29 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS25635 e467b4fa4d38f748f914fb4de1121bfb 290 SUPERFAMILY SSF53187 5 287 3.64E-68 T 29-03-2018 AL539_RS22445 03184a5a40604ef0efb6c01d31c97473 196 SUPERFAMILY SSF46689 3 71 7.77E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22445 03184a5a40604ef0efb6c01d31c97473 196 Gene3D G3DSA:1.10.10.60 1 70 2.4E-11 T 29-03-2018 AL539_RS22445 03184a5a40604ef0efb6c01d31c97473 196 Gene3D G3DSA:1.10.357.10 71 193 2.5E-11 T 29-03-2018 AL539_RS22445 03184a5a40604ef0efb6c01d31c97473 196 SUPERFAMILY SSF48498 81 192 3.88E-19 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS22445 03184a5a40604ef0efb6c01d31c97473 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 2.4E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS22445 03184a5a40604ef0efb6c01d31c97473 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.5E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS22445 03184a5a40604ef0efb6c01d31c97473 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.5E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS10745 8878de42d4173d9ed6c38f05d57aeb8b 181 SMART SM00479 7 180 9.9E-22 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS10745 8878de42d4173d9ed6c38f05d57aeb8b 181 Gene3D G3DSA:3.30.420.10 2 181 9.7E-29 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS10745 8878de42d4173d9ed6c38f05d57aeb8b 181 SUPERFAMILY SSF53098 1 180 6.17E-50 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS10745 8878de42d4173d9ed6c38f05d57aeb8b 181 Pfam PF00929 Exonuclease 9 170 1.2E-37 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS10745 8878de42d4173d9ed6c38f05d57aeb8b 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.891 T 29-03-2018 IPR022894 Oligoribonuclease GO:0000175 AL539_RS11255 9f41513aef92e0cd7f72410276fa3a6f 307 Gene3D G3DSA:3.40.50.300 1 307 9.8E-55 T 29-03-2018 AL539_RS11255 9f41513aef92e0cd7f72410276fa3a6f 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 227 7.8E-12 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AL539_RS11255 9f41513aef92e0cd7f72410276fa3a6f 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 176.464 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL539_RS11255 9f41513aef92e0cd7f72410276fa3a6f 307 PIRSF PIRSF000545 1 307 2.0E-143 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL539_RS11255 9f41513aef92e0cd7f72410276fa3a6f 307 SUPERFAMILY SSF52540 3 306 5.13E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11255 9f41513aef92e0cd7f72410276fa3a6f 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 3.1E-143 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL539_RS21945 0e81d08f5b346cf2364cab5fb356eae4 401 Gene3D G3DSA:1.20.1250.20 6 196 2.7E-30 T 29-03-2018 AL539_RS21945 0e81d08f5b346cf2364cab5fb356eae4 401 Pfam PF07690 Major Facilitator Superfamily 15 354 1.9E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS21945 0e81d08f5b346cf2364cab5fb356eae4 401 SUPERFAMILY SSF103473 9 389 3.14E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS21945 0e81d08f5b346cf2364cab5fb356eae4 401 Gene3D G3DSA:1.20.1250.20 197 393 1.9E-13 T 29-03-2018 AL539_RS03710 c4f6b02bbd642fbaf40b0e13e3325aea 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL539_RS03710 c4f6b02bbd642fbaf40b0e13e3325aea 406 Pfam PF00909 Ammonium Transporter Family 23 399 4.4E-88 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL539_RS03710 c4f6b02bbd642fbaf40b0e13e3325aea 406 SUPERFAMILY SSF111352 17 384 1.31E-95 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL539_RS03710 c4f6b02bbd642fbaf40b0e13e3325aea 406 Gene3D G3DSA:1.10.3430.10 12 384 1.5E-92 T 29-03-2018 AL539_RS05405 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 1.0E-8 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS05405 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 SUPERFAMILY SSF143120 12 68 2.35E-8 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS05405 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 3.6E-5 T 29-03-2018 AL539_RS05405 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 Gene3D G3DSA:3.40.1620.10 10 64 3.3E-9 T 29-03-2018 AL539_RS05450 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 1.0E-8 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS05450 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 SUPERFAMILY SSF143120 12 68 2.35E-8 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS05450 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 3.6E-5 T 29-03-2018 AL539_RS05450 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 Gene3D G3DSA:3.40.1620.10 10 64 3.3E-9 T 29-03-2018 AL539_RS13100 501422448cf23d7054add308062c9d3c 279 SMART SM00382 40 232 3.0E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS13100 501422448cf23d7054add308062c9d3c 279 Gene3D G3DSA:3.40.50.300 2 279 1.9E-75 T 29-03-2018 AL539_RS13100 501422448cf23d7054add308062c9d3c 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS13100 501422448cf23d7054add308062c9d3c 279 SUPERFAMILY SSF52540 6 254 4.28E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13100 501422448cf23d7054add308062c9d3c 279 Pfam PF00005 ABC transporter 32 181 5.4E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 Gene3D G3DSA:3.30.1330.20 215 325 7.0E-46 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 399 38.164 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.2E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.2E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.2E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.2E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 Gene3D G3DSA:3.40.50.1440 9 214 7.8E-41 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 SUPERFAMILY SSF55307 204 320 6.64E-43 T 29-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 SMART SM00864 13 205 3.8E-112 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 333 2.5E-136 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 29-03-2018 IPR024757 Cell division protein FtsZ, C-terminal AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.4E-39 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 SUPERFAMILY SSF52490 13 208 2.88E-69 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL539_RS14600 821f071d9b13679daadb04a306e9daea 412 SMART SM00865 207 325 1.9E-56 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AL539_RS19550 0dd1111c781b8d19103d3c0a86dd6a26 322 PIRSF PIRSF000294 2 318 1.6E-75 T 29-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL539_RS19550 0dd1111c781b8d19103d3c0a86dd6a26 322 SUPERFAMILY SSF46626 178 314 5.74E-31 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS19550 0dd1111c781b8d19103d3c0a86dd6a26 322 Pfam PF03150 Di-haem cytochrome c peroxidase 47 189 5.6E-34 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL539_RS19550 0dd1111c781b8d19103d3c0a86dd6a26 322 Pfam PF00034 Cytochrome c 200 308 3.2E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS19550 0dd1111c781b8d19103d3c0a86dd6a26 322 SUPERFAMILY SSF46626 33 179 9.15E-36 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS19550 0dd1111c781b8d19103d3c0a86dd6a26 322 Gene3D G3DSA:1.10.760.10 195 311 2.9E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS19550 0dd1111c781b8d19103d3c0a86dd6a26 322 Gene3D G3DSA:1.10.760.10 34 194 1.2E-32 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06140 036a4270e70df73210d0126165cc7a38 339 PIRSF PIRSF029594 1 330 2.9E-95 T 29-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 AL539_RS06140 036a4270e70df73210d0126165cc7a38 339 Gene3D G3DSA:1.20.1250.20 2 159 1.9E-4 T 29-03-2018 AL539_RS06140 036a4270e70df73210d0126165cc7a38 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 3.5E-48 T 29-03-2018 IPR022604 Protein of unknown function DUF2955 AL539_RS06140 036a4270e70df73210d0126165cc7a38 339 Pfam PF13515 Fusaric acid resistance protein-like 182 313 4.2E-7 T 29-03-2018 AL539_RS12070 23246598253fe433b78ec960fa5874b2 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL539_RS12070 23246598253fe433b78ec960fa5874b2 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 3.5E-27 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL539_RS12070 23246598253fe433b78ec960fa5874b2 200 PIRSF PIRSF001488 1 200 1.6E-68 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL539_RS12070 23246598253fe433b78ec960fa5874b2 200 SUPERFAMILY SSF52833 20 197 6.26E-43 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS12070 23246598253fe433b78ec960fa5874b2 200 Gene3D G3DSA:3.40.30.10 17 200 3.5E-40 T 29-03-2018 AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 Pfam PF02384 N-6 DNA Methylase 160 468 1.2E-108 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 Pfam PF12161 HsdM N-terminal domain 12 145 1.9E-22 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 285 297 1.3E-12 T 29-03-2018 AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 199 1.3E-12 T 29-03-2018 AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 1.3E-12 T 29-03-2018 AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 479 8.2E-88 T 29-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 Gene3D G3DSA:3.40.50.150 181 463 3.8E-66 T 29-03-2018 AL539_RS00755 a46ed5a20f5f9e810cf69a9c10ce0e43 505 SUPERFAMILY SSF53335 10 504 9.74E-140 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS10660 002b511047b33904014b1c508b375d6d 670 Gene3D G3DSA:3.30.230.10 217 329 2.6E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS10660 002b511047b33904014b1c508b375d6d 670 SUPERFAMILY SSF55874 1 207 9.82E-54 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10660 002b511047b33904014b1c508b375d6d 670 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 1.2E-39 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AL539_RS10660 002b511047b33904014b1c508b375d6d 670 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 3.4E-11 T 29-03-2018 AL539_RS10660 002b511047b33904014b1c508b375d6d 670 Gene3D G3DSA:3.30.565.10 1 216 3.4E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10660 002b511047b33904014b1c508b375d6d 670 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 668 25.187 T 29-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AL539_RS10660 002b511047b33904014b1c508b375d6d 670 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 29-03-2018 IPR014762 DNA mismatch repair, conserved site AL539_RS10660 002b511047b33904014b1c508b375d6d 670 SUPERFAMILY SSF118116 484 669 1.96E-37 T 29-03-2018 AL539_RS10660 002b511047b33904014b1c508b375d6d 670 SUPERFAMILY SSF54211 191 330 4.17E-38 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS10660 002b511047b33904014b1c508b375d6d 670 Pfam PF08676 MutL C terminal dimerisation domain 484 624 2.0E-27 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL539_RS10660 002b511047b33904014b1c508b375d6d 670 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.5E-103 T 29-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AL539_RS10660 002b511047b33904014b1c508b375d6d 670 SMART SM01340 212 330 3.1E-59 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AL539_RS10660 002b511047b33904014b1c508b375d6d 670 SMART SM00853 487 629 9.7E-14 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL539_RS00245 3fea9340ad55859464e3cba55a444058 315 Pfam PF00665 Integrase core domain 167 269 4.1E-11 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL539_RS00245 3fea9340ad55859464e3cba55a444058 315 Gene3D G3DSA:1.10.10.60 3 71 1.1E-12 T 29-03-2018 AL539_RS00245 3fea9340ad55859464e3cba55a444058 315 Pfam PF13936 Helix-turn-helix domain 3 45 1.3E-12 T 29-03-2018 IPR025246 Transposase IS30-like HTH domain AL539_RS00245 3fea9340ad55859464e3cba55a444058 315 Gene3D G3DSA:3.30.420.10 158 314 3.0E-18 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS00245 3fea9340ad55859464e3cba55a444058 315 SUPERFAMILY SSF53098 165 311 1.52E-24 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS00245 3fea9340ad55859464e3cba55a444058 315 SUPERFAMILY SSF46689 2 113 1.43E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS08325 c18960b8aec9ed851d26ffeed4ff1352 151 SUPERFAMILY SSF55729 2 147 5.06E-32 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS08325 c18960b8aec9ed851d26ffeed4ff1352 151 Pfam PF00583 Acetyltransferase (GNAT) family 17 121 1.1E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS08325 c18960b8aec9ed851d26ffeed4ff1352 151 Gene3D G3DSA:3.40.630.30 2 150 2.3E-33 T 29-03-2018 AL539_RS08325 c18960b8aec9ed851d26ffeed4ff1352 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 6.3E-39 T 29-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AL539_RS23495 98e950495e831a3e51addeda75cbfd5e 232 Gene3D G3DSA:1.10.287.70 116 223 2.2E-18 T 29-03-2018 AL539_RS23495 98e950495e831a3e51addeda75cbfd5e 232 Pfam PF07885 Ion channel 138 221 1.4E-17 T 29-03-2018 IPR013099 Potassium channel domain AL539_RS23495 98e950495e831a3e51addeda75cbfd5e 232 SUPERFAMILY SSF81324 130 224 1.57E-18 T 29-03-2018 AL539_RS16640 cd2845587a785ee7475edac126aadec4 92 SUPERFAMILY SSF52833 5 87 1.07E-28 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS16640 cd2845587a785ee7475edac126aadec4 92 Pfam PF10262 Rdx family 6 78 4.3E-31 T 29-03-2018 IPR011893 Selenoprotein, Rdx type AL539_RS16640 cd2845587a785ee7475edac126aadec4 92 Gene3D G3DSA:3.40.30.10 1 92 2.7E-38 T 29-03-2018 AL539_RS16640 cd2845587a785ee7475edac126aadec4 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.6E-24 T 29-03-2018 IPR011893 Selenoprotein, Rdx type AL539_RS05535 e24bc7676f75fd8b7ef90a848e859915 343 SUPERFAMILY SSF81301 6 212 5.07E-34 T 29-03-2018 AL539_RS05535 e24bc7676f75fd8b7ef90a848e859915 343 Gene3D G3DSA:3.30.460.10 6 167 6.8E-23 T 29-03-2018 AL539_RS05535 e24bc7676f75fd8b7ef90a848e859915 343 SMART SM00954 51 186 1.1E-21 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AL539_RS05535 e24bc7676f75fd8b7ef90a848e859915 343 Pfam PF04607 Region found in RelA / SpoT proteins 51 183 1.0E-19 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AL539_RS05535 e24bc7676f75fd8b7ef90a848e859915 343 Gene3D G3DSA:1.10.287.860 169 215 9.7E-12 T 29-03-2018 AL539_RS02760 a1be5f8ec84d1001daebec118703ef02 462 SMART SM01230 128 385 1.8E-85 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS02760 a1be5f8ec84d1001daebec118703ef02 462 SUPERFAMILY SSF54368 31 123 8.11E-7 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS02760 a1be5f8ec84d1001daebec118703ef02 462 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 266 281 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL539_RS02760 a1be5f8ec84d1001daebec118703ef02 462 Gene3D G3DSA:3.10.20.70 27 123 3.4E-11 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS02760 a1be5f8ec84d1001daebec118703ef02 462 SUPERFAMILY SSF55931 131 459 4.77E-88 T 29-03-2018 AL539_RS02760 a1be5f8ec84d1001daebec118703ef02 462 Pfam PF00120 Glutamine synthetase, catalytic domain 132 457 1.8E-86 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL539_RS02760 a1be5f8ec84d1001daebec118703ef02 462 Gene3D G3DSA:3.30.590.10 125 462 8.9E-82 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL539_RS02980 755ebcbe68687af5bde688320c5ca56e 473 SUPERFAMILY SSF55021 398 463 9.16E-9 T 29-03-2018 AL539_RS02980 755ebcbe68687af5bde688320c5ca56e 473 SUPERFAMILY SSF53633 5 307 8.25E-55 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS02980 755ebcbe68687af5bde688320c5ca56e 473 Pfam PF00696 Amino acid kinase family 4 293 1.6E-23 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS02980 755ebcbe68687af5bde688320c5ca56e 473 Gene3D G3DSA:3.30.70.260 303 473 1.2E-15 T 29-03-2018 AL539_RS02980 755ebcbe68687af5bde688320c5ca56e 473 Gene3D G3DSA:3.40.1160.10 2 302 7.5E-42 T 29-03-2018 AL539_RS15980 15a8c9a5afd91827b220bead0a3b1998 521 SUPERFAMILY SSF55073 366 518 8.63E-35 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS15980 15a8c9a5afd91827b220bead0a3b1998 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 9.8E-36 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15980 15a8c9a5afd91827b220bead0a3b1998 521 Gene3D G3DSA:1.20.5.50 234 366 0.0081 T 29-03-2018 AL539_RS15980 15a8c9a5afd91827b220bead0a3b1998 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.1E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15980 15a8c9a5afd91827b220bead0a3b1998 521 SMART SM00267 351 521 1.1E-33 T 29-03-2018 IPR000160 GGDEF domain AL539_RS15980 15a8c9a5afd91827b220bead0a3b1998 521 Gene3D G3DSA:3.30.70.270 367 521 1.4E-39 T 29-03-2018 AL539_RS05935 6c3ad074f17f66e20387a96a544659b0 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.434 T 29-03-2018 IPR007376 dsDNA mimic, putative AL539_RS05935 6c3ad074f17f66e20387a96a544659b0 106 SUPERFAMILY SSF102816 3 105 8.37E-50 T 29-03-2018 IPR007376 dsDNA mimic, putative AL539_RS05935 6c3ad074f17f66e20387a96a544659b0 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.8E-45 T 29-03-2018 IPR007376 dsDNA mimic, putative AL539_RS05935 6c3ad074f17f66e20387a96a544659b0 106 PIRSF PIRSF004916 1 105 1.4E-52 T 29-03-2018 IPR007376 dsDNA mimic, putative AL539_RS05935 6c3ad074f17f66e20387a96a544659b0 106 Gene3D G3DSA:3.10.450.140 6 104 2.9E-45 T 29-03-2018 IPR007376 dsDNA mimic, putative AL539_RS05935 6c3ad074f17f66e20387a96a544659b0 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 4.0E-50 T 29-03-2018 IPR007376 dsDNA mimic, putative AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 Gene3D G3DSA:3.40.350.10 155 297 3.1E-13 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 131 7.6E-20 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 Gene3D G3DSA:3.40.350.10 1 146 2.1E-40 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 Pfam PF00557 Metallopeptidase family M24 309 524 1.8E-43 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 SUPERFAMILY SSF53092 6 130 9.07E-21 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 Gene3D G3DSA:3.90.230.10 300 553 1.9E-62 T 29-03-2018 AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 SUPERFAMILY SSF55920 303 559 3.93E-56 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 Pfam PF16188 C-terminal region of peptidase_M24 534 592 3.6E-22 T 29-03-2018 IPR032416 Peptidase M24, C-terminal domain AL539_RS11785 a8974f9471b1ec188563fb8b78bfb980 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.1E-35 T 29-03-2018 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 SUPERFAMILY SSF46689 65 115 3.49E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 SUPERFAMILY SSF55136 140 304 1.67E-23 T 29-03-2018 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 Gene3D G3DSA:1.10.10.60 66 129 1.4E-11 T 29-03-2018 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 9.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 9.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 Pfam PF12833 Helix-turn-helix domain 35 112 9.8E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 Pfam PF14526 Integron-associated effector binding protein 142 302 6.0E-20 T 29-03-2018 IPR029441 Integron-associated effector binding protein AL539_RS04605 eeec043685942a6915d2b32900c78889 316 Gene3D G3DSA:3.20.80.10 136 308 1.5E-30 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AL539_RS04605 eeec043685942a6915d2b32900c78889 316 SMART SM00871 139 303 5.2E-21 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AL539_RS04605 eeec043685942a6915d2b32900c78889 316 Gene3D G3DSA:1.10.10.60 9 65 9.5E-14 T 29-03-2018 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 SMART SM00342 28 111 5.8E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04605 eeec043685942a6915d2b32900c78889 316 SUPERFAMILY SSF46689 11 62 5.38E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 Gene3D G3DSA:3.40.50.1000 1 35 7.2E-4 T 29-03-2018 IPR023214 HAD-like domain AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 189 9.7E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 Gene3D G3DSA:1.10.150.240 36 78 4.7E-15 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 Gene3D G3DSA:3.40.50.1000 79 218 1.3E-22 T 29-03-2018 IPR023214 HAD-like domain AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 SUPERFAMILY SSF56784 5 218 2.67E-44 T 29-03-2018 IPR023214 HAD-like domain AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 2.1E-27 T 29-03-2018 IPR023214 HAD-like domain AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 7.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 7.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 7.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS18740 35ddba849620c23b31842e6e4998a257 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 7.1E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.9E-34 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 SMART SM00411 1 90 4.1E-44 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL539_RS17145 84db6800118b3f1188e01ec53ac1d371 90 Gene3D G3DSA:4.10.520.10 1 90 1.7E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Gene3D G3DSA:3.30.830.10 271 471 4.8E-32 T 29-03-2018 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Gene3D G3DSA:3.30.830.10 737 942 8.8E-31 T 29-03-2018 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 SUPERFAMILY SSF63411 515 717 5.1E-45 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 SUPERFAMILY SSF63411 45 254 9.67E-56 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 1.3E-10 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Pfam PF00675 Insulinase (Peptidase family M16) 62 150 2.8E-17 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Gene3D G3DSA:3.30.830.10 44 268 3.7E-59 T 29-03-2018 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Pfam PF05193 Peptidase M16 inactive domain 682 853 3.4E-22 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 3.2E-31 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 Gene3D G3DSA:3.30.830.10 515 720 1.0E-42 T 29-03-2018 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 SUPERFAMILY SSF63411 736 936 7.83E-41 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS08820 ce63cbd831d1a2f1ce6a4f738cb8d196 947 SUPERFAMILY SSF63411 274 464 2.2E-32 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 16 323 39.606 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 323 8.5E-139 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Gene3D G3DSA:1.10.10.10 252 321 1.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Pfam PF04542 Sigma-70 region 2 89 158 6.8E-20 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 SUPERFAMILY SSF88659 162 235 2.09E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 311 3.5E-36 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 SUPERFAMILY SSF88659 219 318 2.06E-24 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 4.0E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Gene3D G3DSA:1.10.601.10 3 158 1.5E-59 T 29-03-2018 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Pfam PF04545 Sigma-70, region 4 257 310 2.2E-17 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Gene3D G3DSA:1.10.10.10 159 209 7.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 Pfam PF04539 Sigma-70 region 3 169 242 2.5E-22 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 SUPERFAMILY SSF88946 50 159 9.42E-46 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 6.2E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 6.2E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 6.2E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 6.2E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS08935 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 6.2E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS23880 119d62eb61abb46e55e3774627534bad 239 SUPERFAMILY SSF51069 22 236 2.22E-75 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS23880 119d62eb61abb46e55e3774627534bad 239 Gene3D G3DSA:3.10.200.10 14 239 1.3E-71 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS23880 119d62eb61abb46e55e3774627534bad 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 5.4E-54 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS23880 119d62eb61abb46e55e3774627534bad 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 29-03-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AL539_RS23880 119d62eb61abb46e55e3774627534bad 239 SMART SM01057 23 239 4.5E-99 T 29-03-2018 IPR001148 Alpha carbonic anhydrase AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 Gene3D G3DSA:2.60.40.290 4 112 1.6E-5 T 29-03-2018 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 Gene3D G3DSA:3.30.379.10 131 257 2.1E-19 T 29-03-2018 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 1.9E-49 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PIRSF PIRSF001093 198 638 1.7E-95 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 PIRSF PIRSF001093 114 201 74.0 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 Gene3D G3DSA:3.20.20.80 258 639 3.2E-133 T 29-03-2018 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 SUPERFAMILY SSF55545 126 259 3.74E-25 T 29-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 SUPERFAMILY SSF51445 260 620 3.28E-128 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 1.9E-13 T 29-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS08565 997627d8536dcaa52d31179b0ab25aef 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 2.8E-118 T 29-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS02305 00a1a2d216c7498b0fc43b02527082ef 793 SUPERFAMILY SSF82866 159 383 5.49E-30 T 29-03-2018 AL539_RS02305 00a1a2d216c7498b0fc43b02527082ef 793 Gene3D G3DSA:1.20.1640.10 180 397 4.4E-34 T 29-03-2018 AL539_RS02305 00a1a2d216c7498b0fc43b02527082ef 793 Gene3D G3DSA:1.20.1640.10 564 780 5.5E-35 T 29-03-2018 AL539_RS02305 00a1a2d216c7498b0fc43b02527082ef 793 Pfam PF03176 MMPL family 555 767 1.0E-16 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL539_RS02305 00a1a2d216c7498b0fc43b02527082ef 793 Pfam PF03176 MMPL family 128 383 1.6E-20 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL539_RS02305 00a1a2d216c7498b0fc43b02527082ef 793 SUPERFAMILY SSF82866 617 768 3.79E-34 T 29-03-2018 AL539_RS03715 0a68852eb698379cd48b6765586803b0 243 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.662 T 29-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AL539_RS03715 0a68852eb698379cd48b6765586803b0 243 Gene3D G3DSA:3.40.50.1220 148 242 6.4E-16 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS03715 0a68852eb698379cd48b6765586803b0 243 Pfam PF02146 Sir2 family 13 186 3.3E-51 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 AL539_RS03715 0a68852eb698379cd48b6765586803b0 243 Gene3D G3DSA:3.30.1600.10 32 147 4.1E-33 T 29-03-2018 IPR026591 Sirtuin family, catalytic core small domain AL539_RS03715 0a68852eb698379cd48b6765586803b0 243 SUPERFAMILY SSF52467 6 234 3.71E-72 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS03715 0a68852eb698379cd48b6765586803b0 243 Gene3D G3DSA:3.40.50.1220 5 31 0.15 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS20405 04db79a8aabc3412545b140515b5bdbc 206 Pfam PF01810 LysE type translocator 15 205 1.5E-25 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS20405 04db79a8aabc3412545b140515b5bdbc 206 PIRSF PIRSF006324 1 206 1.2E-45 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS07835 6a376ccb5be34d39bff2b91bae5c1afa 287 SUPERFAMILY SSF56281 29 274 4.74E-24 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS07835 6a376ccb5be34d39bff2b91bae5c1afa 287 SMART SM00849 34 263 0.0028 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS07835 6a376ccb5be34d39bff2b91bae5c1afa 287 Gene3D G3DSA:3.60.15.10 1 278 7.9E-25 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS07835 6a376ccb5be34d39bff2b91bae5c1afa 287 Pfam PF00753 Metallo-beta-lactamase superfamily 34 119 7.0E-10 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS10750 5cf4d6a39c30a09ec9e0a7afe164c2df 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 2.7E-90 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL539_RS10750 5cf4d6a39c30a09ec9e0a7afe164c2df 354 Gene3D G3DSA:1.10.40.50 278 346 6.7E-22 T 29-03-2018 AL539_RS10750 5cf4d6a39c30a09ec9e0a7afe164c2df 354 Gene3D G3DSA:2.40.50.140 36 102 7.1E-15 T 29-03-2018 AL539_RS10750 5cf4d6a39c30a09ec9e0a7afe164c2df 354 Pfam PF03193 RsgA GTPase 100 277 9.0E-57 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL539_RS10750 5cf4d6a39c30a09ec9e0a7afe164c2df 354 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 41 341 37.716 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL539_RS10750 5cf4d6a39c30a09ec9e0a7afe164c2df 354 Gene3D G3DSA:3.40.50.300 112 276 7.6E-26 T 29-03-2018 AL539_RS10750 5cf4d6a39c30a09ec9e0a7afe164c2df 354 SUPERFAMILY SSF52540 114 338 1.09E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25205 321417a84c25f12115813d824e36346e 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL539_RS25205 321417a84c25f12115813d824e36346e 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 2.0E-127 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL539_RS25205 321417a84c25f12115813d824e36346e 382 SUPERFAMILY SSF56796 5 381 3.01E-137 T 29-03-2018 AL539_RS25205 321417a84c25f12115813d824e36346e 382 Gene3D G3DSA:3.40.50.1970 8 181 1.5E-49 T 29-03-2018 AL539_RS25205 321417a84c25f12115813d824e36346e 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL539_RS25205 321417a84c25f12115813d824e36346e 382 Gene3D G3DSA:1.20.1090.10 183 382 8.3E-72 T 29-03-2018 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 Pfam PF00149 Calcineurin-like phosphoesterase 39 259 1.2E-15 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 SUPERFAMILY SSF56300 34 359 1.85E-91 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 PRINTS PR01607 Apyrase family signature 212 229 9.2E-45 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 PRINTS PR01607 Apyrase family signature 416 439 9.2E-45 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 PRINTS PR01607 Apyrase family signature 288 308 9.2E-45 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 PRINTS PR01607 Apyrase family signature 37 55 9.2E-45 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 PRINTS PR01607 Apyrase family signature 243 266 9.2E-45 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 PRINTS PR01607 Apyrase family signature 485 504 9.2E-45 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 Gene3D G3DSA:3.60.21.10 31 359 3.5E-77 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 SUPERFAMILY SSF55816 361 539 4.58E-40 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 Pfam PF02872 5'-nucleotidase, C-terminal domain 361 510 5.8E-29 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS01930 d77b4d203fa30f72a463a7ff4f274daf 562 Gene3D G3DSA:3.90.780.10 360 547 2.6E-36 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS24020 f3c9b545f9965e1c2a28f4d823dda948 236 Gene3D G3DSA:3.40.50.1580 9 236 7.3E-55 T 29-03-2018 AL539_RS24020 f3c9b545f9965e1c2a28f4d823dda948 236 SUPERFAMILY SSF53167 3 234 9.56E-92 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS24020 f3c9b545f9965e1c2a28f4d823dda948 236 Pfam PF01048 Phosphorylase superfamily 17 222 2.1E-34 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS24020 f3c9b545f9965e1c2a28f4d823dda948 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.853 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL539_RS24020 f3c9b545f9965e1c2a28f4d823dda948 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 5.7E-113 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL539_RS02590 15cac37d301ba49f285f187dab2506ab 219 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.2E-33 T 29-03-2018 IPR024402 Domain of unknown function DUF2726 AL539_RS02590 15cac37d301ba49f285f187dab2506ab 219 Gene3D G3DSA:3.30.65.10 163 216 4.4E-11 T 29-03-2018 AL539_RS02590 15cac37d301ba49f285f187dab2506ab 219 PIRSF PIRSF028063 1 219 3.3E-140 T 29-03-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger AL539_RS00910 4df60968afd9dfbef630d8c9be471230 133 Pfam PF07205 Domain of unknown function (DUF1413) 62 123 1.1E-5 T 29-03-2018 IPR010813 Protein of unknown function DUF1413 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 29-03-2018 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 29-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13930 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 20 84 2.7E-31 T 29-03-2018 AL539_RS06185 4e0b8aed6f547f3bb4f3dfcbe28b3f62 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 2.8E-35 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS06185 4e0b8aed6f547f3bb4f3dfcbe28b3f62 377 Gene3D G3DSA:2.40.50.100 37 89 6.5E-7 T 29-03-2018 AL539_RS06185 4e0b8aed6f547f3bb4f3dfcbe28b3f62 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 8.4E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS06185 4e0b8aed6f547f3bb4f3dfcbe28b3f62 377 Gene3D G3DSA:1.20.1600.10 90 283 8.4E-15 T 29-03-2018 AL539_RS06185 4e0b8aed6f547f3bb4f3dfcbe28b3f62 377 SUPERFAMILY SSF111369 49 253 3.01E-15 T 29-03-2018 AL539_RS07325 9b144bcb8d48ba0e98b62b54010681a1 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.4E-22 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL539_RS07325 9b144bcb8d48ba0e98b62b54010681a1 295 PIRSF PIRSF003092 6 287 7.9E-86 T 29-03-2018 IPR025501 ATP binding protein MinD AL539_RS07325 9b144bcb8d48ba0e98b62b54010681a1 295 Gene3D G3DSA:3.40.50.300 21 265 1.1E-50 T 29-03-2018 AL539_RS07325 9b144bcb8d48ba0e98b62b54010681a1 295 SUPERFAMILY SSF52540 22 283 1.15E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01565 6326a81f7e5e7687f3edadf6e1eb0a10 418 PIRSF PIRSF003085 15 418 9.4E-118 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL539_RS01565 6326a81f7e5e7687f3edadf6e1eb0a10 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 9.3E-79 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS01565 6326a81f7e5e7687f3edadf6e1eb0a10 418 SUPERFAMILY SSF53335 21 370 8.02E-91 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS01565 6326a81f7e5e7687f3edadf6e1eb0a10 418 Gene3D G3DSA:3.40.50.150 138 417 9.5E-57 T 29-03-2018 AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 46 153 4.0E-12 T 29-03-2018 IPR000014 PAS domain AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 310 4.8E-40 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 Pfam PF08447 PAS fold 54 140 8.2E-21 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 SMART SM00086 103 146 3.3E-5 T 29-03-2018 IPR001610 PAC motif AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 Gene3D G3DSA:1.20.5.370 4 33 4.7E-4 T 29-03-2018 AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 Gene3D G3DSA:3.30.70.270 148 318 1.8E-50 T 29-03-2018 AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 SMART SM00267 146 315 9.3E-49 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 SUPERFAMILY SSF55785 46 148 1.77E-18 T 29-03-2018 IPR000014 PAS domain AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 Gene3D G3DSA:3.30.450.20 34 147 6.0E-20 T 29-03-2018 AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 314 4.3E-36 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18115 6a03614879acf0ef905b42efe8a78323 319 SUPERFAMILY SSF55073 162 316 9.42E-40 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS14770 544dbce5d5dd70a43fb79fe6f22a08df 219 Gene3D G3DSA:3.40.50.360 1 200 1.5E-29 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS14770 544dbce5d5dd70a43fb79fe6f22a08df 219 SUPERFAMILY SSF52218 1 183 3.69E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS14770 544dbce5d5dd70a43fb79fe6f22a08df 219 Pfam PF03358 NADPH-dependent FMN reductase 1 150 1.7E-22 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL539_RS18185 02d7181338e38debc0f4b1da1835fcc9 169 SUPERFAMILY SSF55729 2 156 1.57E-38 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS18185 02d7181338e38debc0f4b1da1835fcc9 169 Gene3D G3DSA:3.40.630.30 1 169 1.1E-26 T 29-03-2018 AL539_RS18185 02d7181338e38debc0f4b1da1835fcc9 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 9.0E-27 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS16055 12e48c9875cad93ce87325e7b97397ba 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL539_RS16055 12e48c9875cad93ce87325e7b97397ba 416 SUPERFAMILY SSF53383 6 415 4.26E-185 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS16055 12e48c9875cad93ce87325e7b97397ba 416 PIRSF PIRSF000412 1 416 4.3E-170 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL539_RS16055 12e48c9875cad93ce87325e7b97397ba 416 Gene3D G3DSA:3.40.640.10 37 274 1.7E-55 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS16055 12e48c9875cad93ce87325e7b97397ba 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 2.6E-183 T 29-03-2018 AL539_RS16055 12e48c9875cad93ce87325e7b97397ba 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.634 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL539_RS16055 12e48c9875cad93ce87325e7b97397ba 416 Gene3D G3DSA:3.90.1150.10 275 414 6.0E-59 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS17540 8879adee863c1ef0627e588494604cee 246 Gene3D G3DSA:1.10.3720.10 3 246 1.9E-37 T 29-03-2018 AL539_RS17540 8879adee863c1ef0627e588494604cee 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 3.2E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS17540 8879adee863c1ef0627e588494604cee 246 SUPERFAMILY SSF161098 11 78 1.14E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS17540 8879adee863c1ef0627e588494604cee 246 SUPERFAMILY SSF161098 110 233 1.14E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS17540 8879adee863c1ef0627e588494604cee 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 5.3E-16 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 5.8E-139 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 1.2E-162 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 2.5E-65 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS11735 8a0cf8dce1001824ff19ec447a511868 588 SUPERFAMILY SSF56235 45 587 2.51E-175 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS17845 fc3af0508ba8dd1636007e57defc0cb8 347 SUPERFAMILY SSF51735 121 240 2.17E-11 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS17845 fc3af0508ba8dd1636007e57defc0cb8 347 Pfam PF07885 Ion channel 23 102 1.0E-14 T 29-03-2018 IPR013099 Potassium channel domain AL539_RS17845 fc3af0508ba8dd1636007e57defc0cb8 347 SUPERFAMILY SSF81324 23 138 1.09E-17 T 29-03-2018 AL539_RS17845 fc3af0508ba8dd1636007e57defc0cb8 347 Gene3D G3DSA:3.40.50.720 112 237 1.0E-11 T 29-03-2018 AL539_RS17845 fc3af0508ba8dd1636007e57defc0cb8 347 Gene3D G3DSA:1.10.287.70 5 106 3.4E-12 T 29-03-2018 AL539_RS24690 839db81624eab67cc7c04770556e91ea 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 2.2E-23 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL539_RS24690 839db81624eab67cc7c04770556e91ea 125 SUPERFAMILY SSF69118 4 122 1.13E-36 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL539_RS24690 839db81624eab67cc7c04770556e91ea 125 Gene3D G3DSA:1.20.1290.10 6 125 8.5E-36 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL539_RS19585 13589579ca8f2f520f2dc3b5a816907d 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 1.1E-59 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AL539_RS19585 13589579ca8f2f520f2dc3b5a816907d 312 SUPERFAMILY SSF53850 20 296 8.25E-89 T 29-03-2018 AL539_RS19585 13589579ca8f2f520f2dc3b5a816907d 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 307 3.4E-144 T 29-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 AL539_RS19585 13589579ca8f2f520f2dc3b5a816907d 312 Gene3D G3DSA:3.40.190.10 153 312 6.6E-35 T 29-03-2018 AL539_RS19585 13589579ca8f2f520f2dc3b5a816907d 312 Gene3D G3DSA:3.40.190.10 19 152 9.8E-21 T 29-03-2018 AL539_RS23400 e80ed7281d07aba60dd85132300f82e9 290 SUPERFAMILY SSF52151 4 246 2.51E-32 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS23400 e80ed7281d07aba60dd85132300f82e9 290 Gene3D G3DSA:3.40.1090.10 2 218 2.5E-23 T 29-03-2018 AL539_RS23400 e80ed7281d07aba60dd85132300f82e9 290 Pfam PF01734 Patatin-like phospholipase 7 170 5.5E-13 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL539_RS19435 2240a7e57f82c2a83c3294dc3715bb20 243 Gene3D G3DSA:3.40.50.1580 10 242 3.8E-48 T 29-03-2018 AL539_RS19435 2240a7e57f82c2a83c3294dc3715bb20 243 Pfam PF01048 Phosphorylase superfamily 17 200 1.4E-35 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS19435 2240a7e57f82c2a83c3294dc3715bb20 243 SUPERFAMILY SSF53167 4 220 1.31E-67 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS01855 f7926c1491413bfeedbfa6815ab174b1 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 4.1E-27 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS01855 f7926c1491413bfeedbfa6815ab174b1 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 2.5E-108 T 29-03-2018 IPR006508 Pseudouridine synthase, RluA-like AL539_RS01855 f7926c1491413bfeedbfa6815ab174b1 230 Gene3D G3DSA:3.30.2350.10 1 208 1.0E-49 T 29-03-2018 AL539_RS01855 f7926c1491413bfeedbfa6815ab174b1 230 SUPERFAMILY SSF55120 2 198 1.44E-47 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS01855 f7926c1491413bfeedbfa6815ab174b1 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS08680 4b73849013db2fb4f47ff73e1b92a4d9 305 Pfam PF00005 ABC transporter 20 164 2.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS08680 4b73849013db2fb4f47ff73e1b92a4d9 305 Gene3D G3DSA:3.40.50.300 1 274 1.4E-62 T 29-03-2018 AL539_RS08680 4b73849013db2fb4f47ff73e1b92a4d9 305 SUPERFAMILY SSF52540 3 229 4.49E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08680 4b73849013db2fb4f47ff73e1b92a4d9 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS08680 4b73849013db2fb4f47ff73e1b92a4d9 305 SMART SM00382 29 213 2.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03935 47b6a7feb4a50cad68bd053aa85c874d 157 Gene3D G3DSA:3.30.450.40 2 150 1.1E-20 T 29-03-2018 IPR029016 GAF domain-like AL539_RS03935 47b6a7feb4a50cad68bd053aa85c874d 157 SUPERFAMILY SSF55781 4 144 1.06E-39 T 29-03-2018 IPR029016 GAF domain-like AL539_RS03935 47b6a7feb4a50cad68bd053aa85c874d 157 Pfam PF13185 GAF domain 41 142 7.0E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS03935 47b6a7feb4a50cad68bd053aa85c874d 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 29-03-2018 IPR000614 Free Met sulfoxide reductase conserved site AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 482 2.6E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 SMART SM00283 257 518 5.0E-64 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 SUPERFAMILY SSF58104 248 517 1.7E-70 T 29-03-2018 AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 107 1.9E-10 T 29-03-2018 IPR000014 PAS domain AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 Gene3D G3DSA:1.10.287.950 271 482 5.9E-49 T 29-03-2018 AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 Pfam PF08447 PAS fold 28 110 8.2E-19 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 Gene3D G3DSA:3.40.50.10600 10 124 1.9E-24 T 29-03-2018 AL539_RS25520 a0c36c6416b81688afa6dc4d48672601 518 SUPERFAMILY SSF55785 17 110 1.95E-22 T 29-03-2018 IPR000014 PAS domain AL539_RS08310 60f2e061b088c4adfff27798cd45bd85 257 Gene3D G3DSA:3.20.20.140 1 257 2.0E-75 T 29-03-2018 AL539_RS08310 60f2e061b088c4adfff27798cd45bd85 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL539_RS08310 60f2e061b088c4adfff27798cd45bd85 257 SUPERFAMILY SSF51556 1 255 7.49E-76 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS08310 60f2e061b088c4adfff27798cd45bd85 257 PIRSF PIRSF005902 1 257 7.0E-66 T 29-03-2018 IPR001130 TatD family GO:0016788 AL539_RS08310 60f2e061b088c4adfff27798cd45bd85 257 Pfam PF01026 TatD related DNase 4 253 1.9E-64 T 29-03-2018 IPR001130 TatD family GO:0016788 AL539_RS08310 60f2e061b088c4adfff27798cd45bd85 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 75 1.7E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 Pfam PF07702 UTRA domain 97 234 2.6E-32 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 Gene3D G3DSA:1.10.10.10 1 74 5.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 SMART SM00866 96 235 2.2E-21 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 SUPERFAMILY SSF64288 63 238 9.42E-37 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 SMART SM00345 16 75 5.8E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 SUPERFAMILY SSF46785 15 89 1.14E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21065 b82e83c73b64eb60b28392b2bebc347a 242 Gene3D G3DSA:3.40.1410.10 75 240 6.1E-30 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS06555 a0a1b568f6d7f2c58dba3f0378221f4a 319 Gene3D G3DSA:3.20.20.70 1 242 3.9E-46 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS06555 a0a1b568f6d7f2c58dba3f0378221f4a 319 SUPERFAMILY SSF51395 1 312 3.3E-73 T 29-03-2018 AL539_RS06555 a0a1b568f6d7f2c58dba3f0378221f4a 319 PIRSF PIRSF006621 1 318 3.1E-75 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS06555 a0a1b568f6d7f2c58dba3f0378221f4a 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS06555 a0a1b568f6d7f2c58dba3f0378221f4a 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.387 T 29-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AL539_RS06555 a0a1b568f6d7f2c58dba3f0378221f4a 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 300 3.9E-78 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS02445 b438b15327adf6f7839a84fd793f27e8 76 SUPERFAMILY SSF52833 3 68 6.13E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS02445 b438b15327adf6f7839a84fd793f27e8 76 Gene3D G3DSA:3.40.30.10 1 76 4.4E-15 T 29-03-2018 AL539_RS02445 b438b15327adf6f7839a84fd793f27e8 76 Pfam PF00462 Glutaredoxin 4 60 6.3E-12 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL539_RS02445 b438b15327adf6f7839a84fd793f27e8 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 SUPERFAMILY SSF55874 449 602 9.16E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 Gene3D G3DSA:1.10.287.130 341 440 4.0E-5 T 29-03-2018 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 SUPERFAMILY SSF103190 51 185 2.55E-17 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 2.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 2.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 2.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 2.2E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 599 4.0E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 Pfam PF02743 Cache domain 40 229 1.6E-16 T 29-03-2018 IPR033479 Double Cache domain 1 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 Gene3D G3DSA:3.30.450.20 59 164 1.5E-17 T 29-03-2018 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 SUPERFAMILY SSF47384 362 441 1.96E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 SMART SM00387 488 602 2.1E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 PIRSF PIRSF036431 4 609 3.5E-190 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 Gene3D G3DSA:3.30.450.20 165 295 5.8E-8 T 29-03-2018 AL539_RS22780 ae546091dd79541f905c38e8cd08f217 615 Gene3D G3DSA:3.30.565.10 447 611 1.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 SMART SM00345 7 66 5.3E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 SUPERFAMILY SSF53383 91 462 5.24E-96 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.8E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 Gene3D G3DSA:1.10.10.10 1 54 2.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 Pfam PF00155 Aminotransferase class I and II 145 457 1.3E-34 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 Gene3D G3DSA:3.40.640.10 126 367 3.4E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 Gene3D G3DSA:3.90.1150.10 368 463 2.3E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 Gene3D G3DSA:3.90.1150.10 55 99 0.25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS05650 af263163bf050941e49a8cc0386e2671 463 SUPERFAMILY SSF46785 1 68 9.25E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01670 909db44924576b8612c072f23254267a 245 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 122.338 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL539_RS01670 909db44924576b8612c072f23254267a 245 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 8.0E-105 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL539_RS01670 909db44924576b8612c072f23254267a 245 SUPERFAMILY SSF56300 1 223 6.77E-31 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS01670 909db44924576b8612c072f23254267a 245 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 202 4.5E-7 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AL539_RS01670 909db44924576b8612c072f23254267a 245 Gene3D G3DSA:3.60.21.10 1 238 5.6E-23 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS13620 0f1e8baca098fab2e799150fe28fa0c9 144 Gene3D G3DSA:3.100.10.10 40 144 3.5E-24 T 29-03-2018 AL539_RS13620 0f1e8baca098fab2e799150fe28fa0c9 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 3.5E-50 T 29-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13620 0f1e8baca098fab2e799150fe28fa0c9 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-31 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P AL539_RS13620 0f1e8baca098fab2e799150fe28fa0c9 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.069 T 29-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AL539_RS13620 0f1e8baca098fab2e799150fe28fa0c9 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 29-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13620 0f1e8baca098fab2e799150fe28fa0c9 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P AL539_RS04000 36a1cd83aff220ddd0d4c22d03f8ac7b 401 SUPERFAMILY SSF161098 193 382 7.85E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04000 36a1cd83aff220ddd0d4c22d03f8ac7b 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 5.9E-17 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS04000 36a1cd83aff220ddd0d4c22d03f8ac7b 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 5.5E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04000 36a1cd83aff220ddd0d4c22d03f8ac7b 401 Gene3D G3DSA:1.10.3720.10 190 401 4.4E-36 T 29-03-2018 AL539_RS04000 36a1cd83aff220ddd0d4c22d03f8ac7b 401 Gene3D G3DSA:1.10.3720.10 24 186 7.2E-18 T 29-03-2018 AL539_RS04000 36a1cd83aff220ddd0d4c22d03f8ac7b 401 SUPERFAMILY SSF161098 91 160 1.83E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 Pfam PF00085 Thioredoxin 43 140 1.2E-27 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 29-03-2018 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 29-03-2018 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 29-03-2018 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 1.1E-34 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 PIRSF PIRSF000077 39 142 3.3E-32 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 Gene3D G3DSA:3.40.30.10 40 144 4.9E-34 T 29-03-2018 AL539_RS18200 7a5343c3386eb4812f9434f1676e2e05 144 SUPERFAMILY SSF52833 27 143 1.06E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 11 366 7.0E-161 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 9 366 52.162 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 PIRSF PIRSF000525 5 367 2.2E-153 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 Gene3D G3DSA:3.40.640.10 23 264 3.1E-28 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 SUPERFAMILY SSF53383 10 365 4.24E-116 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 Gene3D G3DSA:3.90.1150.10 265 365 6.0E-37 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 Pfam PF00266 Aminotransferase class-V 11 355 1.5E-63 T 29-03-2018 IPR000192 Aminotransferase class V domain AL539_RS02105 1dfdc05d4b9be77b47063c687827dd9f 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL539_RS14270 55ba549e0c89caad893439906e10966e 376 Pfam PF14350 Beta protein 8 350 5.9E-71 T 29-03-2018 IPR025683 Protein beta AL539_RS02795 00d524251a6e39adc30dcf713cfad60f 360 SUPERFAMILY SSF55909 3 360 3.93E-137 T 29-03-2018 AL539_RS02795 00d524251a6e39adc30dcf713cfad60f 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 2.4E-118 T 29-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AL539_RS02795 00d524251a6e39adc30dcf713cfad60f 360 Gene3D G3DSA:3.75.10.10 1 360 6.5E-135 T 29-03-2018 AL539_RS02795 00d524251a6e39adc30dcf713cfad60f 360 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 1.9E-171 T 29-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AL539_RS02795 00d524251a6e39adc30dcf713cfad60f 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.661 T 29-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AL539_RS08185 6cc815606181445f95cbcc9460b3c2f8 394 Pfam PF05940 NnrS protein 16 388 1.2E-107 T 29-03-2018 IPR010266 NnrS AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Gene3D G3DSA:1.10.150.200 128 180 1.6E-4 T 29-03-2018 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Gene3D G3DSA:1.25.40.10 215 249 4.6E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Pfam PF16331 TolA binding protein trimerisation 42 116 1.6E-24 T 29-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 250 17.463 T 29-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Pfam PF13174 Tetratricopeptide repeat 208 240 8.9E-8 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Gene3D G3DSA:3.90.20.10 13 127 6.1E-4 T 29-03-2018 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 SMART SM00028 171 204 22.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 SMART SM00028 207 240 0.27 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 SUPERFAMILY SSF48452 135 245 1.23E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Gene3D G3DSA:1.25.40.10 181 214 3.1E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 250 3.1E-39 T 29-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal AL539_RS17835 c64614654bea96fcb5f4adaf5d283166 250 Pfam PF13432 Tetratricopeptide repeat 145 196 6.9E-7 T 29-03-2018 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PIRSF PIRSF001336 2 640 9.0E-251 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 Gene3D G3DSA:2.40.37.10 1 83 1.5E-13 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 Gene3D G3DSA:2.40.37.10 387 587 3.0E-63 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 638 6.0E-267 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 SUPERFAMILY SSF51419 70 352 1.96E-63 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 Gene3D G3DSA:3.20.20.10 84 352 2.0E-41 T 29-03-2018 IPR029066 PLP-binding barrel AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 42.405 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 3.4E-63 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.2E-12 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 2.2E-12 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.2E-12 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 2.2E-12 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL539_RS21935 b75f26aa24a748423fdaffe1f9a22c0a 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 83 350 5.3E-49 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL539_RS18795 5feab9ed132c917bda3ffc138cd45ae8 244 PIRSF PIRSF039085 4 243 5.4E-102 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL539_RS18795 5feab9ed132c917bda3ffc138cd45ae8 244 SUPERFAMILY SSF52540 8 237 9.58E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18795 5feab9ed132c917bda3ffc138cd45ae8 244 Pfam PF00005 ABC transporter 23 167 1.7E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS18795 5feab9ed132c917bda3ffc138cd45ae8 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS18795 5feab9ed132c917bda3ffc138cd45ae8 244 SMART SM00382 32 215 3.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS18795 5feab9ed132c917bda3ffc138cd45ae8 244 Gene3D G3DSA:3.40.50.300 4 243 2.9E-76 T 29-03-2018 AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 SUPERFAMILY SSF53613 1 305 1.42E-82 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 Pfam PF00294 pfkB family carbohydrate kinase 1 297 8.4E-69 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 Gene3D G3DSA:3.40.1190.20 3 307 6.5E-72 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 PRINTS PR00990 Ribokinase signature 22 41 1.0E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 PRINTS PR00990 Ribokinase signature 175 190 1.0E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS20800 bb8d69a0d082ca6dd325c1c1cfdadd2c 307 PRINTS PR00990 Ribokinase signature 214 225 1.0E-5 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL539_RS24295 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Gene3D G3DSA:3.40.50.720 4 166 6.0E-33 T 29-03-2018 AL539_RS24295 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.3E-31 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL539_RS24295 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 3.8E-48 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL539_RS24295 d0a3e2b352668e4ff9c7e9aa8560eac7 292 PIRSF PIRSF000103 1 292 3.0E-78 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL539_RS24295 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Gene3D G3DSA:1.10.1040.10 167 292 7.8E-33 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS24295 d0a3e2b352668e4ff9c7e9aa8560eac7 292 SUPERFAMILY SSF51735 4 166 1.77E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS24295 d0a3e2b352668e4ff9c7e9aa8560eac7 292 SUPERFAMILY SSF48179 167 290 6.69E-39 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS24120 1d5b37eca9aae9147ceebdd0eb992cff 328 SUPERFAMILY SSF53300 88 287 6.68E-39 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS24120 1d5b37eca9aae9147ceebdd0eb992cff 328 Gene3D G3DSA:3.40.50.410 85 308 1.6E-46 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS24120 1d5b37eca9aae9147ceebdd0eb992cff 328 SMART SM00327 90 266 2.0E-19 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS24120 1d5b37eca9aae9147ceebdd0eb992cff 328 Pfam PF00092 von Willebrand factor type A domain 92 284 5.8E-31 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 Gene3D G3DSA:1.10.10.60 220 266 2.2E-9 T 29-03-2018 AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 SUPERFAMILY SSF46689 219 266 1.97E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 Pfam PF12833 Helix-turn-helix domain 190 264 5.2E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 Gene3D G3DSA:2.60.120.10 4 173 1.6E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 SUPERFAMILY SSF51182 25 191 7.44E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 SMART SM00342 182 264 2.7E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22870 c7d63bc5d07d861b0f1635298dceaa56 271 Gene3D G3DSA:1.10.10.60 174 219 6.6E-9 T 29-03-2018 AL539_RS02420 84ed5ecb89ca2bd0300a0f5e6232459a 255 SMART SM00382 22 217 4.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02420 84ed5ecb89ca2bd0300a0f5e6232459a 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 255 44.431 T 29-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 AL539_RS02420 84ed5ecb89ca2bd0300a0f5e6232459a 255 Gene3D G3DSA:3.40.50.300 12 248 4.1E-42 T 29-03-2018 AL539_RS02420 84ed5ecb89ca2bd0300a0f5e6232459a 255 Pfam PF00005 ABC transporter 15 168 5.1E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS02420 84ed5ecb89ca2bd0300a0f5e6232459a 255 SUPERFAMILY SSF52540 16 232 2.28E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23770 c5116ba5bdee40d05966f83f0bf33e9e 251 SUPERFAMILY SSF89550 5 245 6.54E-60 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL539_RS23770 c5116ba5bdee40d05966f83f0bf33e9e 251 SMART SM00481 6 80 9.3E-8 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_RS23770 c5116ba5bdee40d05966f83f0bf33e9e 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 3 246 52.015 T 29-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AL539_RS23770 c5116ba5bdee40d05966f83f0bf33e9e 251 Gene3D G3DSA:3.20.20.140 2 248 3.6E-35 T 29-03-2018 AL539_RS01775 f42e2cf6199c88bf86643a4d299a5f7f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 3.0E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS01775 f42e2cf6199c88bf86643a4d299a5f7f 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.1E-13 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_RS01775 f42e2cf6199c88bf86643a4d299a5f7f 295 Gene3D G3DSA:1.10.3720.10 14 284 2.4E-32 T 29-03-2018 AL539_RS01775 f42e2cf6199c88bf86643a4d299a5f7f 295 SUPERFAMILY SSF161098 89 276 1.96E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS11490 aeaf47241d5f1500f165afd332b08f6a 122 Pfam PF13643 Domain of unknown function (DUF4145) 9 73 6.1E-5 T 29-03-2018 IPR025285 Domain of unknown function DUF4145 AL539_RS22975 f02d91279a8993d7d14a0da1bfb56354 374 Gene3D G3DSA:2.40.370.10 252 374 1.4E-40 T 29-03-2018 IPR023374 AttH-like domain AL539_RS22975 f02d91279a8993d7d14a0da1bfb56354 374 Pfam PF17186 Lipocalin-like domain 252 374 2.4E-41 T 29-03-2018 AL539_RS22975 f02d91279a8993d7d14a0da1bfb56354 374 SUPERFAMILY SSF159245 49 374 6.8E-104 T 29-03-2018 AL539_RS22975 f02d91279a8993d7d14a0da1bfb56354 374 Pfam PF07143 CrtC N-terminal lipocalin domain 72 247 2.5E-55 T 29-03-2018 IPR010791 AttH domain AL539_RS22975 f02d91279a8993d7d14a0da1bfb56354 374 Gene3D G3DSA:2.40.370.10 60 250 6.2E-68 T 29-03-2018 IPR023374 AttH-like domain AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 Gene3D G3DSA:2.40.30.10 4 107 4.9E-22 T 29-03-2018 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 SUPERFAMILY SSF52343 118 253 1.57E-31 T 29-03-2018 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 7.8E-16 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 Gene3D G3DSA:3.10.20.30 251 350 1.0E-21 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 Gene3D G3DSA:3.40.50.80 116 250 2.5E-25 T 29-03-2018 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.9E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.9E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.9E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 SUPERFAMILY SSF63380 4 110 2.79E-27 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 SUPERFAMILY SSF54292 242 350 8.91E-24 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 341 1.1E-11 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS01865 07bd4e3ce0afbffc10d659ea542ff1f5 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 5.2E-13 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 SUPERFAMILY SSF52518 333 525 2.5E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 Gene3D G3DSA:3.40.50.970 363 539 2.7E-42 T 29-03-2018 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 SUPERFAMILY SSF52518 5 328 6.92E-121 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 SMART SM00861 353 524 1.0E-66 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 SUPERFAMILY SSF52922 532 663 3.4E-45 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.6E-47 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 Gene3D G3DSA:3.40.50.970 1 362 5.3E-127 T 29-03-2018 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 Gene3D G3DSA:3.40.50.920 540 663 9.6E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 2.9E-167 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 Pfam PF02780 Transketolase, C-terminal domain 542 654 4.4E-21 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS20270 7acdb610f56817e59d3367f841c64f68 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL539_RS16085 959c382a9c92492482b000ea06264402 373 Pfam PF01098 Cell cycle protein 24 367 1.6E-112 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AL539_RS16085 959c382a9c92492482b000ea06264402 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 3.3E-134 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AL539_RS16085 959c382a9c92492482b000ea06264402 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AL539_RS19930 5eb51a298f3229ae80a0181fea69641e 268 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 258 1.3E-60 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AL539_RS19930 5eb51a298f3229ae80a0181fea69641e 268 Pfam PF09850 Type VI secretion system protein DotU 52 251 1.2E-49 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AL539_RS06145 59e3d59a796a3f270824d2cbf2111557 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 1.2E-36 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL539_RS06145 59e3d59a796a3f270824d2cbf2111557 342 Gene3D G3DSA:3.20.20.210 1 341 7.5E-91 T 29-03-2018 AL539_RS06145 59e3d59a796a3f270824d2cbf2111557 342 SUPERFAMILY SSF51726 3 339 8.37E-70 T 29-03-2018 AL539_RS06145 59e3d59a796a3f270824d2cbf2111557 342 PIRSF PIRSF005632 1 342 4.9E-195 T 29-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AL539_RS19570 74f4b9b5c80ddc5670cef33fb4f4aacc 244 SUPERFAMILY SSF55469 32 242 7.72E-55 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS19570 74f4b9b5c80ddc5670cef33fb4f4aacc 244 Pfam PF00881 Nitroreductase family 36 219 2.7E-18 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL539_RS19570 74f4b9b5c80ddc5670cef33fb4f4aacc 244 Gene3D G3DSA:3.40.109.10 27 244 2.8E-34 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 SUPERFAMILY SSF52540 285 515 3.33E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Gene3D G3DSA:3.30.450.40 16 188 2.9E-4 T 29-03-2018 IPR029016 GAF domain-like AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 369 384 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Gene3D G3DSA:1.10.10.60 521 586 2.7E-14 T 29-03-2018 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 306 319 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Pfam PF02954 Bacterial regulatory protein, Fis family 557 582 9.9E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Gene3D G3DSA:3.40.50.300 290 454 9.8E-24 T 29-03-2018 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Gene3D G3DSA:1.10.8.60 455 520 2.9E-11 T 29-03-2018 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 SMART SM00382 302 446 1.6E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Pfam PF00158 Sigma-54 interaction domain 286 449 2.8E-61 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 567 587 1.1E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 550 567 1.1E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Pfam PF01590 GAF domain 83 186 1.6E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 Gene3D G3DSA:3.30.450.20 189 289 0.037 T 29-03-2018 AL539_RS04575 bc13551703d6d18543da9d62aba4f758 588 SUPERFAMILY SSF46689 491 586 1.69E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 Pfam PF13091 PLD-like domain 78 224 1.5E-15 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 Pfam PF13091 PLD-like domain 310 449 1.3E-24 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 SUPERFAMILY SSF56024 60 237 6.8E-39 T 29-03-2018 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 SUPERFAMILY SSF56024 280 456 4.12E-36 T 29-03-2018 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 Gene3D G3DSA:3.30.870.10 294 489 1.4E-24 T 29-03-2018 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 Gene3D G3DSA:3.30.870.10 66 269 2.5E-29 T 29-03-2018 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 SMART SM00155 399 426 4.2E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS21140 32591e1a609d7a00a5ac0ca5de0b340b 505 SMART SM00155 165 192 0.027 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL539_RS15220 8c4641eda80f5693cf2116e137c84833 203 Pfam PF00578 AhpC/TSA family 4 139 8.0E-34 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS15220 8c4641eda80f5693cf2116e137c84833 203 SUPERFAMILY SSF52833 1 194 5.48E-66 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS15220 8c4641eda80f5693cf2116e137c84833 203 PIRSF PIRSF000239 1 201 2.1E-58 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS15220 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.40.30.10 3 161 1.5E-40 T 29-03-2018 AL539_RS15220 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.30.1020.10 162 199 7.0E-13 T 29-03-2018 AL539_RS15220 8c4641eda80f5693cf2116e137c84833 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 SUPERFAMILY SSF52518 386 563 6.6E-27 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 550 1.7E-8 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 189 397 1.1E-37 T 29-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 444 2.3E-126 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 Gene3D G3DSA:3.40.50.1220 219 365 3.3E-15 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 568 31.591 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 SUPERFAMILY SSF52518 9 178 1.39E-30 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 Gene3D G3DSA:3.40.50.970 366 571 5.9E-20 T 29-03-2018 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 Gene3D G3DSA:3.40.50.970 4 208 5.6E-46 T 29-03-2018 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 141 7.9E-30 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL539_RS17190 9c40c2b25b30a30b6535ddd569cf33f8 572 PIRSF PIRSF004983 3 572 3.8E-180 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 SUPERFAMILY SSF52540 3 94 9.31E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 SUPERFAMILY SSF52540 126 245 9.31E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 Gene3D G3DSA:3.40.50.300 4 283 1.5E-54 T 29-03-2018 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 SUPERFAMILY SSF52540 310 518 1.52E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 Gene3D G3DSA:3.40.50.300 284 551 2.4E-58 T 29-03-2018 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 Pfam PF00005 ABC transporter 336 469 2.7E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 Pfam PF00005 ABC transporter 19 185 2.8E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 SMART SM00382 28 230 8.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 SMART SM00382 344 514 1.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 Pfam PF12848 ABC transporter 224 297 3.9E-11 T 29-03-2018 IPR032781 ABC-transporter extension domain AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 7.9E-22 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AL539_RS03880 f84ac2ea134d873dc745639fcec3fd29 639 Gene3D G3DSA:1.20.58.410 555 638 5.6E-5 T 29-03-2018 AL539_RS17025 d0bb6f1347a05f17beeb0aedfc57ea09 86 SUPERFAMILY SSF47336 5 85 7.33E-14 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL539_RS17025 d0bb6f1347a05f17beeb0aedfc57ea09 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 7.1E-10 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL539_RS17025 d0bb6f1347a05f17beeb0aedfc57ea09 86 Gene3D G3DSA:1.10.1200.10 2 86 8.3E-18 T 29-03-2018 AL539_RS06210 4baf15a43f70b299621aa73e2d863839 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 515 3.8E-15 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL539_RS06210 4baf15a43f70b299621aa73e2d863839 703 Pfam PF13899 Thioredoxin-like 587 673 2.2E-11 T 29-03-2018 AL539_RS06210 4baf15a43f70b299621aa73e2d863839 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 164 6.8E-17 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL539_RS06210 4baf15a43f70b299621aa73e2d863839 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL539_RS06210 4baf15a43f70b299621aa73e2d863839 703 Gene3D G3DSA:3.40.30.10 572 682 7.6E-8 T 29-03-2018 AL539_RS06210 4baf15a43f70b299621aa73e2d863839 703 SUPERFAMILY SSF52833 579 673 1.97E-12 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 SUPERFAMILY SSF160544 238 345 3.92E-32 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.6E-44 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.6E-44 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.6E-44 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.6E-44 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.6E-44 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 4.8E-134 T 29-03-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 340 1.5E-112 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS04445 c1b9c82459c39377b7694e6bef3188e0 349 Gene3D G3DSA:3.40.1690.10 212 347 3.1E-49 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_RS01555 2d58bbbc4cdf13e9dc5de70cb45565ed 436 Gene3D G3DSA:3.90.660.20 52 417 4.6E-32 T 29-03-2018 AL539_RS01555 2d58bbbc4cdf13e9dc5de70cb45565ed 436 Gene3D G3DSA:3.50.50.60 1 51 1.3E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS01555 2d58bbbc4cdf13e9dc5de70cb45565ed 436 SUPERFAMILY SSF51905 388 419 4.92E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS01555 2d58bbbc4cdf13e9dc5de70cb45565ed 436 SUPERFAMILY SSF51905 7 305 4.92E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS01555 2d58bbbc4cdf13e9dc5de70cb45565ed 436 Pfam PF01593 Flavin containing amine oxidoreductase 16 308 1.2E-17 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL539_RS23975 743065c324a6f8b2ef78581a386c1b82 93 Pfam PF14145 YrhK-like protein 21 74 4.9E-17 T 29-03-2018 IPR025424 YrhK domain AL539_RS23975 743065c324a6f8b2ef78581a386c1b82 93 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 15 78 2.0E-27 T 29-03-2018 AL539_RS19410 f7e6243b1ca0b05186392ed9b15c2e4d 251 Pfam PF00005 ABC transporter 18 164 6.7E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS19410 f7e6243b1ca0b05186392ed9b15c2e4d 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS19410 f7e6243b1ca0b05186392ed9b15c2e4d 251 SUPERFAMILY SSF52540 2 227 7.06E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19410 f7e6243b1ca0b05186392ed9b15c2e4d 251 SMART SM00382 26 213 5.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS19410 f7e6243b1ca0b05186392ed9b15c2e4d 251 Gene3D G3DSA:3.40.50.300 1 233 1.5E-53 T 29-03-2018 AL539_RS01520 f14b5fc9d94ec4193ed324cbf3451da1 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AL539_RS01520 f14b5fc9d94ec4193ed324cbf3451da1 395 SUPERFAMILY SSF53383 16 391 1.01E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS01520 f14b5fc9d94ec4193ed324cbf3451da1 395 Gene3D G3DSA:3.40.640.10 73 290 5.0E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS01520 f14b5fc9d94ec4193ed324cbf3451da1 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 34 388 3.0E-134 T 29-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL539_RS01520 f14b5fc9d94ec4193ed324cbf3451da1 395 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 16 392 45.701 T 29-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL539_RS01520 f14b5fc9d94ec4193ed324cbf3451da1 395 Gene3D G3DSA:3.90.1150.10 291 395 9.4E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS01520 f14b5fc9d94ec4193ed324cbf3451da1 395 Pfam PF00155 Aminotransferase class I and II 54 384 2.1E-50 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS00875 45ff72bbaa1aeb8f7558fd8d06521af4 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 162 3.5E-69 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AL539_RS00875 45ff72bbaa1aeb8f7558fd8d06521af4 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 85.143 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AL539_RS00875 45ff72bbaa1aeb8f7558fd8d06521af4 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 5.0E-33 T 29-03-2018 IPR005134 Uncharacterised protein family UPF0114 AL539_RS07750 bb4b0e3518f3fa5c906dad05ed80aaad 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.3E-77 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL539_RS07750 bb4b0e3518f3fa5c906dad05ed80aaad 185 SUPERFAMILY SSF55194 2 185 4.19E-72 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL539_RS07750 bb4b0e3518f3fa5c906dad05ed80aaad 185 Gene3D G3DSA:1.10.132.20 75 184 6.8E-38 T 29-03-2018 AL539_RS07750 bb4b0e3518f3fa5c906dad05ed80aaad 185 Gene3D G3DSA:1.10.132.20 2 74 2.4E-13 T 29-03-2018 AL539_RS07750 bb4b0e3518f3fa5c906dad05ed80aaad 185 Pfam PF01765 Ribosome recycling factor 20 183 3.9E-63 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL539_RS07750 bb4b0e3518f3fa5c906dad05ed80aaad 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.852 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 SUPERFAMILY SSF103190 207 298 6.67E-23 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 1.4E-38 T 29-03-2018 IPR000160 GGDEF domain AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Gene3D G3DSA:3.30.450.20 73 205 3.2E-35 T 29-03-2018 AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Gene3D G3DSA:3.30.450.20 336 472 4.9E-21 T 29-03-2018 AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Gene3D G3DSA:3.30.450.20 212 298 6.2E-17 T 29-03-2018 AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 614 3.4E-35 T 29-03-2018 IPR000160 GGDEF domain AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 SUPERFAMILY SSF103190 36 206 3.14E-50 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 SUPERFAMILY SSF55073 470 618 2.67E-39 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Pfam PF13426 PAS domain 352 452 3.5E-8 T 29-03-2018 IPR000014 PAS domain AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Pfam PF02743 Cache domain 38 283 6.8E-14 T 29-03-2018 IPR033479 Double Cache domain 1 AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 SUPERFAMILY SSF55785 352 462 2.26E-16 T 29-03-2018 IPR000014 PAS domain AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Gene3D G3DSA:3.30.70.270 473 624 5.7E-44 T 29-03-2018 AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 SMART SM00267 454 619 1.5E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 Gene3D G3DSA:1.20.5.170 27 72 2.1E-22 T 29-03-2018 AL539_RS14055 08b11c45b23ced4a3cc6e9446a4665bd 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 7.2E-10 T 29-03-2018 IPR000014 PAS domain AL539_RS05540 7422a68993c0a1848b0b7ada5f28b6b3 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 9.9E-23 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL539_RS05540 7422a68993c0a1848b0b7ada5f28b6b3 320 SUPERFAMILY SSF56349 99 185 2.03E-48 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS05540 7422a68993c0a1848b0b7ada5f28b6b3 320 SUPERFAMILY SSF56349 214 315 2.03E-48 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS05540 7422a68993c0a1848b0b7ada5f28b6b3 320 Gene3D G3DSA:1.10.443.10 101 309 2.2E-47 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS05540 7422a68993c0a1848b0b7ada5f28b6b3 320 Gene3D G3DSA:1.10.150.130 1 94 4.6E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS05540 7422a68993c0a1848b0b7ada5f28b6b3 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 1.5E-152 T 29-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AL539_RS05540 7422a68993c0a1848b0b7ada5f28b6b3 320 Pfam PF00589 Phage integrase family 105 305 2.0E-43 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 SUPERFAMILY SSF55874 198 347 6.81E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 SMART SM00387 233 348 4.3E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 Pfam PF00989 PAS fold 7 111 7.8E-17 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 SMART SM00388 129 194 2.7E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 Gene3D G3DSA:1.10.287.130 123 190 2.2E-13 T 29-03-2018 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.1E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 2.7E-7 T 29-03-2018 IPR000014 PAS domain AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 5.6E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 SUPERFAMILY SSF55785 8 102 5.06E-9 T 29-03-2018 IPR000014 PAS domain AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.3E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.3E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 SUPERFAMILY SSF47384 125 190 4.71E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 Gene3D G3DSA:3.30.565.10 191 348 2.3E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 Gene3D G3DSA:3.30.450.20 4 122 7.6E-15 T 29-03-2018 AL539_RS12820 47ae781ebf445af35c65ccbfed3cb433 348 SMART SM00091 4 72 6.6E-8 T 29-03-2018 IPR000014 PAS domain AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 Gene3D G3DSA:1.25.40.80 152 288 9.0E-35 T 29-03-2018 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 Pfam PF00875 DNA photolyase 7 163 3.8E-26 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 SUPERFAMILY SSF48173 198 419 3.01E-70 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 419 1.5E-177 T 29-03-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 Gene3D G3DSA:3.40.50.620 1 151 6.2E-32 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 Pfam PF03441 FAD binding domain of DNA photolyase 274 417 7.7E-42 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 PRINTS PR00147 DNA photolyase signature 321 337 2.4E-11 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 PRINTS PR00147 DNA photolyase signature 380 394 2.4E-11 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 PRINTS PR00147 DNA photolyase signature 341 359 2.4E-11 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 Gene3D G3DSA:1.10.579.10 289 439 1.5E-45 T 29-03-2018 AL539_RS21755 39fbb8cbd60b2af18aed0223311ad6d0 450 SUPERFAMILY SSF52425 2 189 1.44E-36 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 Gene3D G3DSA:3.40.50.10490 140 259 4.1E-53 T 29-03-2018 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 Gene3D G3DSA:1.10.1390.10 514 550 7.8E-21 T 29-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 Pfam PF00342 Phosphoglucose isomerase 53 542 2.3E-255 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.206 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 SUPERFAMILY SSF53697 6 548 2.56E-226 T 29-03-2018 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 Gene3D G3DSA:3.40.50.10490 8 139 8.8E-45 T 29-03-2018 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS10215 32eed219a154c22fe96c1a3e5b5a64c3 550 Gene3D G3DSA:3.40.50.10490 260 513 2.7E-127 T 29-03-2018 AL539_RS11610 054021d3ce303ccb96eb77579eb26761 242 SUPERFAMILY SSF69618 1 241 1.83E-50 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11610 054021d3ce303ccb96eb77579eb26761 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 236 7.6E-32 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL539_RS11610 054021d3ce303ccb96eb77579eb26761 242 Gene3D G3DSA:3.40.50.10090 138 242 3.9E-16 T 29-03-2018 AL539_RS11610 054021d3ce303ccb96eb77579eb26761 242 Gene3D G3DSA:3.40.50.10090 35 137 1.2E-18 T 29-03-2018 AL539_RS24745 7aadb0982140f129e489990274c8ccf7 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 371 1.0E-84 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS24745 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13437 HlyD family secretion protein 173 287 8.6E-8 T 29-03-2018 AL539_RS24745 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13533 Biotin-lipoyl like 63 110 4.3E-14 T 29-03-2018 AL539_RS24745 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.50.100 167 374 9.4E-6 T 29-03-2018 AL539_RS24745 7aadb0982140f129e489990274c8ccf7 380 SUPERFAMILY SSF111369 50 295 1.31E-59 T 29-03-2018 AL539_RS24745 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.50.100 61 133 4.1E-21 T 29-03-2018 AL539_RS03805 f4702d8c6e8d955e1328b2204ed9f898 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 3.9E-81 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL539_RS03805 f4702d8c6e8d955e1328b2204ed9f898 206 Gene3D G3DSA:1.10.760.10 40 206 1.4E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS03805 f4702d8c6e8d955e1328b2204ed9f898 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.5E-80 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL539_RS03805 f4702d8c6e8d955e1328b2204ed9f898 206 SUPERFAMILY SSF46626 21 202 3.93E-28 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS00495 896e94b7cfa4083879e5f7efd929453a 169 SMART SM00318 22 154 1.4E-37 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AL539_RS00495 896e94b7cfa4083879e5f7efd929453a 169 SUPERFAMILY SSF50199 19 155 4.58E-37 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AL539_RS00495 896e94b7cfa4083879e5f7efd929453a 169 ProSitePatterns PS01284 Thermonuclease family signature 2. 99 109 - T 29-03-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 AL539_RS00495 896e94b7cfa4083879e5f7efd929453a 169 Gene3D G3DSA:2.40.50.90 17 160 8.3E-36 T 29-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain AL539_RS00495 896e94b7cfa4083879e5f7efd929453a 169 Pfam PF00565 Staphylococcal nuclease homologue 59 153 8.7E-25 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AL539_RS01545 7c97612941542f4d47e65fffc23abcb3 139 Pfam PF12680 SnoaL-like domain 9 108 6.1E-11 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AL539_RS01545 7c97612941542f4d47e65fffc23abcb3 139 SUPERFAMILY SSF54427 5 130 9.91E-22 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS01545 7c97612941542f4d47e65fffc23abcb3 139 Gene3D G3DSA:3.10.450.50 3 121 1.1E-18 T 29-03-2018 AL539_RS18620 7766cf4026dc7fca4de898ff8a72763a 144 Pfam PF03061 Thioesterase superfamily 52 128 2.2E-14 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL539_RS18620 7766cf4026dc7fca4de898ff8a72763a 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 4.9E-37 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL539_RS18620 7766cf4026dc7fca4de898ff8a72763a 144 Gene3D G3DSA:3.10.129.10 1 144 2.3E-25 T 29-03-2018 AL539_RS18620 7766cf4026dc7fca4de898ff8a72763a 144 SUPERFAMILY SSF54637 1 137 4.41E-29 T 29-03-2018 IPR029069 HotDog domain AL539_RS12790 0c9eb5ce912ba672fe0a8b488e55154a 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.502 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 AL539_RS12790 0c9eb5ce912ba672fe0a8b488e55154a 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 7.2E-45 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 SUPERFAMILY SSF52172 2 109 7.54E-27 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 Pfam PF01339 CheB methylesterase 185 362 3.1E-58 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 PIRSF PIRSF000876 1 368 9.0E-128 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 Pfam PF00072 Response regulator receiver domain 5 109 2.4E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 Gene3D G3DSA:3.40.50.2300 2 153 7.1E-30 T 29-03-2018 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 SUPERFAMILY SSF52738 179 364 7.59E-63 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 Gene3D G3DSA:3.40.50.180 172 367 1.8E-68 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 368 38.945 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL539_RS07300 b229c40efca28cf9fd8288b05e595118 370 SMART SM00448 3 126 1.3E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 29-03-2018 IPR008991 Translation protein SH3-like domain AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.2E-70 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 123 181 1.5E-19 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 6 119 2.1E-41 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 29-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 29-03-2018 IPR005824 KOW AL539_RS11215 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 29-03-2018 IPR005824 KOW AL539_RS13290 9a1a3e9774924283822d725c6bb2501e 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 25 219 1.1E-56 T 29-03-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AL539_RS13290 9a1a3e9774924283822d725c6bb2501e 225 SUPERFAMILY SSF159270 28 223 1.31E-57 T 29-03-2018 IPR023373 YmcC-like domain AL539_RS13290 9a1a3e9774924283822d725c6bb2501e 225 Gene3D G3DSA:2.40.360.10 27 225 1.1E-58 T 29-03-2018 IPR023373 YmcC-like domain AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 26 91 6.5E-11 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Gene3D G3DSA:3.10.560.10 385 474 1.0E-13 T 29-03-2018 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Gene3D G3DSA:3.10.560.10 103 183 1.2E-15 T 29-03-2018 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Gene3D G3DSA:3.10.560.10 197 288 2.2E-18 T 29-03-2018 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Gene3D G3DSA:3.10.560.10 482 577 8.1E-16 T 29-03-2018 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Gene3D G3DSA:3.10.560.10 578 672 2.9E-19 T 29-03-2018 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Gene3D G3DSA:3.10.560.10 289 379 9.4E-17 T 29-03-2018 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Pfam PF10531 SLBB domain 212 253 1.6E-7 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Pfam PF10531 SLBB domain 396 447 6.8E-8 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Pfam PF10531 SLBB domain 590 633 2.0E-11 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Pfam PF10531 SLBB domain 495 538 8.9E-5 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Pfam PF10531 SLBB domain 105 149 1.9E-4 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Pfam PF10531 SLBB domain 299 352 3.2E-12 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS03385 77cf44b3f140843eedeb87d5080c4532 700 Gene3D G3DSA:3.30.1950.10 32 102 6.9E-11 T 29-03-2018 AL539_RS10910 f4e4be27fffe83e233fc3691e3d1131e 159 PIRSF PIRSF029256 1 159 4.7E-67 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL539_RS10910 f4e4be27fffe83e233fc3691e3d1131e 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 2.3E-59 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL539_RS10910 f4e4be27fffe83e233fc3691e3d1131e 159 SUPERFAMILY SSF75217 2 157 2.09E-43 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS10910 f4e4be27fffe83e233fc3691e3d1131e 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.869 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AL539_RS10910 f4e4be27fffe83e233fc3691e3d1131e 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 2.8E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL539_RS10910 f4e4be27fffe83e233fc3691e3d1131e 159 Gene3D G3DSA:3.40.1280.10 1 158 3.3E-38 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS07225 a007bab26285fee3a4631fae34d7dae4 223 Gene3D G3DSA:1.10.10.60 20 65 8.4E-11 T 29-03-2018 AL539_RS07225 a007bab26285fee3a4631fae34d7dae4 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 50 79 1.5E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS07225 a007bab26285fee3a4631fae34d7dae4 223 Gene3D G3DSA:1.10.10.60 66 140 6.0E-10 T 29-03-2018 AL539_RS07225 a007bab26285fee3a4631fae34d7dae4 223 SUPERFAMILY SSF46689 28 90 3.99E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS00730 a007bab26285fee3a4631fae34d7dae4 223 Gene3D G3DSA:1.10.10.60 20 65 8.4E-11 T 29-03-2018 AL539_RS00730 a007bab26285fee3a4631fae34d7dae4 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 50 79 1.5E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS00730 a007bab26285fee3a4631fae34d7dae4 223 Gene3D G3DSA:1.10.10.60 66 140 6.0E-10 T 29-03-2018 AL539_RS00730 a007bab26285fee3a4631fae34d7dae4 223 SUPERFAMILY SSF46689 28 90 3.99E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS02775 ff4345880b34d6c7cde74eb97f6bf7ed 185 Gene3D G3DSA:2.60.120.10 69 185 7.9E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS02775 ff4345880b34d6c7cde74eb97f6bf7ed 185 Pfam PF01381 Helix-turn-helix 12 64 1.0E-17 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS02775 ff4345880b34d6c7cde74eb97f6bf7ed 185 Pfam PF07883 Cupin domain 112 178 3.8E-16 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AL539_RS02775 ff4345880b34d6c7cde74eb97f6bf7ed 185 SUPERFAMILY SSF51182 49 183 8.91E-26 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS02775 ff4345880b34d6c7cde74eb97f6bf7ed 185 SMART SM00530 9 64 5.0E-18 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS02775 ff4345880b34d6c7cde74eb97f6bf7ed 185 Gene3D G3DSA:1.10.260.40 1 68 3.2E-22 T 29-03-2018 AL539_RS02775 ff4345880b34d6c7cde74eb97f6bf7ed 185 SUPERFAMILY SSF47413 2 71 5.63E-21 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.9E-46 T 29-03-2018 AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 1.9E-159 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 SUPERFAMILY SSF52954 327 421 9.32E-27 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 PIRSF PIRSF001549 2 422 5.0E-126 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 Gene3D G3DSA:3.30.930.10 2 324 7.9E-74 T 29-03-2018 AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 Pfam PF03129 Anticodon binding domain 329 420 9.9E-11 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 SUPERFAMILY SSF55681 5 320 3.38E-105 T 29-03-2018 AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 Gene3D G3DSA:3.40.50.800 325 422 6.8E-18 T 29-03-2018 IPR004154 Anticodon-binding AL539_RS15360 639e489fa3024b4839e85fa87c056058 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.91 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 2.6E-90 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 4.2E-147 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 PIRSF PIRSF000164 10 336 4.5E-105 T 29-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 SUPERFAMILY SSF51395 1 336 4.0E-108 T 29-03-2018 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.393 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL539_RS03900 c633226647227088df2bdef9eda475d7 336 Gene3D G3DSA:3.20.20.70 1 336 5.2E-80 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 5.2E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 SUPERFAMILY SSF118215 5 406 2.09E-105 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 4.6E-115 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS15755 fcde3bcb225d7ef91e37e1e031cca090 424 Gene3D G3DSA:1.10.3860.10 1 412 4.7E-108 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL539_RS20765 72480b5ed0b171740c6248a931245532 157 Gene3D G3DSA:3.40.30.10 1 157 4.3E-27 T 29-03-2018 AL539_RS20765 72480b5ed0b171740c6248a931245532 157 Pfam PF08534 Redoxin 4 154 4.6E-38 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL539_RS20765 72480b5ed0b171740c6248a931245532 157 SUPERFAMILY SSF52833 1 156 2.01E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS12570 38206c7ca920d8f7537f4f2696ba78ed 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.393 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL539_RS12570 38206c7ca920d8f7537f4f2696ba78ed 279 SUPERFAMILY SSF53335 9 273 7.59E-96 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS12570 38206c7ca920d8f7537f4f2696ba78ed 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.8E-116 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL539_RS12570 38206c7ca920d8f7537f4f2696ba78ed 279 Gene3D G3DSA:3.40.50.150 1 279 1.2E-91 T 29-03-2018 AL539_RS13025 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13025 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 90 2.2E-28 T 29-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL539_RS13025 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.1E-17 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL539_RS13025 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL539_RS13025 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AL539_RS13025 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS02495 ef9d9c1792cd4823f73c4c675659ab69 357 SUPERFAMILY SSF53850 25 355 2.95E-59 T 29-03-2018 AL539_RS02495 ef9d9c1792cd4823f73c4c675659ab69 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 1.4E-34 T 29-03-2018 AL539_RS02495 ef9d9c1792cd4823f73c4c675659ab69 357 Gene3D G3DSA:3.40.190.10 18 150 2.3E-11 T 29-03-2018 AL539_RS02495 ef9d9c1792cd4823f73c4c675659ab69 357 Gene3D G3DSA:3.40.190.10 151 295 5.2E-20 T 29-03-2018 AL539_RS06250 6cef9d7f3a040cfb75c0aa906f65ba65 350 Gene3D G3DSA:1.10.760.10 58 156 1.8E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06250 6cef9d7f3a040cfb75c0aa906f65ba65 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 301 5.9E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06250 6cef9d7f3a040cfb75c0aa906f65ba65 350 Gene3D G3DSA:1.10.760.10 198 309 1.3E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06250 6cef9d7f3a040cfb75c0aa906f65ba65 350 SUPERFAMILY SSF46626 54 163 2.97E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06250 6cef9d7f3a040cfb75c0aa906f65ba65 350 SUPERFAMILY SSF46626 209 313 1.89E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS02080 7ea7b7aedf897216f5f00bf31192e71f 195 Pfam PF04993 TfoX N-terminal domain 11 100 5.5E-23 T 29-03-2018 IPR007076 TfoX, N-terminal AL539_RS02080 7ea7b7aedf897216f5f00bf31192e71f 195 Gene3D G3DSA:3.30.1460.30 4 103 4.7E-13 T 29-03-2018 AL539_RS02080 7ea7b7aedf897216f5f00bf31192e71f 195 PIRSF PIRSF028788 7 195 1.4E-33 T 29-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL539_RS02080 7ea7b7aedf897216f5f00bf31192e71f 195 Gene3D G3DSA:1.10.150.20 115 194 2.6E-17 T 29-03-2018 AL539_RS02080 7ea7b7aedf897216f5f00bf31192e71f 195 Pfam PF04994 TfoX C-terminal domain 114 192 4.7E-26 T 29-03-2018 IPR007077 TfoX, C-terminal AL539_RS02080 7ea7b7aedf897216f5f00bf31192e71f 195 SUPERFAMILY SSF159894 3 103 1.67E-26 T 29-03-2018 AL539_RS21485 28e4cada753d308a359ffd38c6300e99 93 SUPERFAMILY SSF101498 12 89 1.05E-8 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL539_RS21485 28e4cada753d308a359ffd38c6300e99 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.4E-14 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL539_RS21485 28e4cada753d308a359ffd38c6300e99 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 86 4.5E-6 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AL539_RS12845 1c2d4f3d3a470bb2a887f77a88fcb205 213 Gene3D G3DSA:1.20.5.50 112 213 0.0013 T 29-03-2018 AL539_RS12845 1c2d4f3d3a470bb2a887f77a88fcb205 213 Gene3D G3DSA:1.20.1480.30 23 111 0.039 T 29-03-2018 AL539_RS12845 1c2d4f3d3a470bb2a887f77a88fcb205 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 1.0E-90 T 29-03-2018 IPR021342 Protein of unknown function DUF2959 AL539_RS14825 541e46f67ce3862607c2ed99f4825bc2 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 3.6E-133 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL539_RS14825 541e46f67ce3862607c2ed99f4825bc2 436 Pfam PF05525 Branched-chain amino acid transport protein 8 426 2.3E-150 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL539_RS23740 0a2612bf272fae5e08fd791b3818b2c7 448 SUPERFAMILY SSF52540 102 370 3.12E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23740 0a2612bf272fae5e08fd791b3818b2c7 448 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 444 3.4E-189 T 29-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS23740 0a2612bf272fae5e08fd791b3818b2c7 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 3.6E-72 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS23740 0a2612bf272fae5e08fd791b3818b2c7 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 445 1.3E-164 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS23740 0a2612bf272fae5e08fd791b3818b2c7 448 SMART SM00382 166 349 0.0014 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23740 0a2612bf272fae5e08fd791b3818b2c7 448 Gene3D G3DSA:3.40.50.300 55 365 3.5E-84 T 29-03-2018 AL539_RS23740 0a2612bf272fae5e08fd791b3818b2c7 448 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS02780 4203a9507bd31359eb585a9d3506a53f 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS02780 4203a9507bd31359eb585a9d3506a53f 494 Pfam PF00171 Aldehyde dehydrogenase family 33 487 1.3E-173 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS02780 4203a9507bd31359eb585a9d3506a53f 494 Gene3D G3DSA:3.40.605.10 6 280 2.5E-96 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS02780 4203a9507bd31359eb585a9d3506a53f 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS02780 4203a9507bd31359eb585a9d3506a53f 494 SUPERFAMILY SSF53720 7 492 2.62E-169 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS02780 4203a9507bd31359eb585a9d3506a53f 494 Gene3D G3DSA:3.40.309.10 281 474 8.1E-74 T 29-03-2018 AL539_RS20560 29135c3984857ecab4065dcae7688581 420 Pfam PF13520 Amino acid permease 9 367 9.3E-31 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS20560 29135c3984857ecab4065dcae7688581 420 PIRSF PIRSF006060 1 412 1.8E-56 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 Gene3D G3DSA:3.40.190.10 151 392 1.1E-37 T 29-03-2018 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 4.9E-44 T 29-03-2018 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 Gene3D G3DSA:3.40.190.10 19 150 2.6E-23 T 29-03-2018 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 SUPERFAMILY SSF53850 24 391 1.55E-89 T 29-03-2018 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 167 186 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 32 50 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 229 248 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 66 84 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 147 166 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 126 145 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 295 316 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 353 372 2.4E-80 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 AL539_RS24385 2949b7ce99341cd27febf860a35b8ba0 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 AL539_RS11955 f55f328ca6f6ab8fc206170f3bc715ff 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.7E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS11955 f55f328ca6f6ab8fc206170f3bc715ff 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 3.1E-4 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS11955 f55f328ca6f6ab8fc206170f3bc715ff 182 SUPERFAMILY SSF51161 5 175 2.22E-44 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS11955 f55f328ca6f6ab8fc206170f3bc715ff 182 Gene3D G3DSA:2.160.10.10 1 182 1.1E-40 T 29-03-2018 AL539_RS18565 7eca54b0117198198b770777d1dfa62a 200 Gene3D G3DSA:3.40.50.1110 19 200 5.3E-38 T 29-03-2018 AL539_RS18565 7eca54b0117198198b770777d1dfa62a 200 SUPERFAMILY SSF52266 22 199 1.21E-51 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL539_RS18565 7eca54b0117198198b770777d1dfa62a 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 3.0E-23 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL539_RS18565 7eca54b0117198198b770777d1dfa62a 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 29-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL539_RS03310 16a3d444c382060a9ef312217481e4cd 526 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.6E-169 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS03310 16a3d444c382060a9ef312217481e4cd 526 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 3.4E-134 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS03310 16a3d444c382060a9ef312217481e4cd 526 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 3.9E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 3.9E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 3.9E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 3.9E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 SUPERFAMILY SSF52172 721 837 4.98E-31 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 4.1E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 Gene3D G3DSA:3.40.50.2300 703 844 3.1E-33 T 29-03-2018 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 Gene3D G3DSA:3.30.565.10 534 690 7.3E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 Gene3D G3DSA:1.10.287.130 452 525 9.2E-6 T 29-03-2018 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 5.2E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 SMART SM00387 574 683 1.7E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 SMART SM00388 461 530 8.3E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 SUPERFAMILY SSF55874 532 683 7.07E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 SMART SM00448 721 831 1.2E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 SUPERFAMILY SSF47384 452 519 4.71E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS06020 07e1c21d8c56381fecacbc1e209e3a48 846 Pfam PF00072 Response regulator receiver domain 723 830 3.3E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22050 765ab65848dc1623feb06c25f76c0f49 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 2.4E-38 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL539_RS22050 765ab65848dc1623feb06c25f76c0f49 236 Gene3D G3DSA:3.20.20.190 1 235 3.7E-63 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL539_RS22050 765ab65848dc1623feb06c25f76c0f49 236 SUPERFAMILY SSF51695 3 234 1.13E-66 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL539_RS08585 f69ce52de3ad5843bb40d36022e9a02f 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 7.9E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS08585 f69ce52de3ad5843bb40d36022e9a02f 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 533 6.2E-7 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS08585 f69ce52de3ad5843bb40d36022e9a02f 541 Gene3D G3DSA:1.10.3720.10 316 540 1.3E-27 T 29-03-2018 AL539_RS08585 f69ce52de3ad5843bb40d36022e9a02f 541 SUPERFAMILY SSF161098 9 258 7.59E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS08585 f69ce52de3ad5843bb40d36022e9a02f 541 Gene3D G3DSA:1.10.3720.10 38 264 5.9E-32 T 29-03-2018 AL539_RS08585 f69ce52de3ad5843bb40d36022e9a02f 541 SUPERFAMILY SSF161098 282 535 4.58E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS11465 1b6b48ab0b7ad075b084f1e581971a54 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.3E-19 T 29-03-2018 IPR009525 Protein of unknown function DUF1145 AL539_RS19660 3f4832b4ce63a8374c5fe8dee391d0a1 267 Gene3D G3DSA:3.90.226.10 6 214 1.7E-48 T 29-03-2018 AL539_RS19660 3f4832b4ce63a8374c5fe8dee391d0a1 267 Gene3D G3DSA:1.10.12.10 215 266 3.6E-13 T 29-03-2018 IPR014748 Crontonase, C-terminal AL539_RS19660 3f4832b4ce63a8374c5fe8dee391d0a1 267 SUPERFAMILY SSF52096 10 265 2.64E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS19660 3f4832b4ce63a8374c5fe8dee391d0a1 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 265 4.4E-47 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL539_RS03020 a91b93de8abe93ce86b229bfab228afd 483 Gene3D G3DSA:3.30.1120.10 367 450 2.4E-8 T 29-03-2018 AL539_RS03020 a91b93de8abe93ce86b229bfab228afd 483 Pfam PF00884 Sulfatase 28 343 5.0E-56 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS03020 a91b93de8abe93ce86b229bfab228afd 483 Gene3D G3DSA:3.40.720.10 28 366 1.4E-73 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS03020 a91b93de8abe93ce86b229bfab228afd 483 SUPERFAMILY SSF53649 27 427 6.98E-101 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS14410 aac5b42b7b359419eda8977a78758d26 215 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 197 4.1E-65 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AL539_RS14410 aac5b42b7b359419eda8977a78758d26 215 ProSitePatterns PS00893 Nudix box signature. 95 116 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS14410 aac5b42b7b359419eda8977a78758d26 215 Gene3D G3DSA:3.90.79.10 1 207 8.9E-44 T 29-03-2018 AL539_RS14410 aac5b42b7b359419eda8977a78758d26 215 SUPERFAMILY SSF55811 8 205 1.9E-45 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS14410 aac5b42b7b359419eda8977a78758d26 215 Pfam PF00293 NUDIX domain 56 174 5.3E-10 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS19920 61794ee49c18601f8cd20e02eb514ac3 725 Gene3D G3DSA:2.70.70.10 16 318 7.0E-22 T 29-03-2018 AL539_RS19920 61794ee49c18601f8cd20e02eb514ac3 725 Gene3D G3DSA:3.30.20.10 598 663 1.1E-14 T 29-03-2018 AL539_RS19920 61794ee49c18601f8cd20e02eb514ac3 725 SUPERFAMILY SSF53955 596 720 3.09E-29 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS19920 61794ee49c18601f8cd20e02eb514ac3 725 SUPERFAMILY SSF53955 505 554 3.09E-29 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 3.3E-46 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 PIRSF PIRSF001467 1 164 9.1E-26 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.5E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.5E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.5E-10 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 Gene3D G3DSA:2.40.100.10 1 164 1.3E-48 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL539_RS22570 570a852561c1c51cdef1dcb4049e2894 164 SUPERFAMILY SSF50891 2 162 5.11E-57 T 29-03-2018 IPR029000 Cyclophilin-like domain AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 Gene3D G3DSA:3.40.50.2300 1 124 5.8E-27 T 29-03-2018 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 SUPERFAMILY SSF52172 7 125 6.83E-30 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 1.2E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 SMART SM00421 139 196 8.0E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 Gene3D G3DSA:1.10.10.10 125 199 6.8E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.0E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.0E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.0E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 SMART SM00448 8 119 7.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 Pfam PF00072 Response regulator receiver domain 10 119 8.0E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS06220 a6a8030934b91e57b8bbc073ef5b2df6 200 SUPERFAMILY SSF46894 130 197 2.38E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS15390 5f282d883da759a084be289da2011e5d 443 Gene3D G3DSA:2.40.50.140 3 104 1.3E-6 T 29-03-2018 AL539_RS15390 5f282d883da759a084be289da2011e5d 443 Gene3D G3DSA:3.40.50.1970 113 245 2.9E-5 T 29-03-2018 AL539_RS15390 5f282d883da759a084be289da2011e5d 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.287 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS15390 5f282d883da759a084be289da2011e5d 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 353 4.7E-133 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS15390 5f282d883da759a084be289da2011e5d 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.1E-100 T 29-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AL539_RS15390 5f282d883da759a084be289da2011e5d 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.9E-30 T 29-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AL539_RS24135 0251d4033a069ee83869cd9b5e51f2e3 318 Gene3D G3DSA:3.40.50.300 17 183 1.0E-27 T 29-03-2018 AL539_RS24135 0251d4033a069ee83869cd9b5e51f2e3 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-62 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL539_RS24135 0251d4033a069ee83869cd9b5e51f2e3 318 Gene3D G3DSA:1.10.8.300 199 315 3.1E-36 T 29-03-2018 AL539_RS24135 0251d4033a069ee83869cd9b5e51f2e3 318 SUPERFAMILY SSF52540 6 290 3.01E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24135 0251d4033a069ee83869cd9b5e51f2e3 318 PIRSF PIRSF002849 1 318 7.5E-129 T 29-03-2018 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 Gene3D G3DSA:1.20.1080.10 11 288 5.1E-75 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 Pfam PF01226 Formate/nitrite transporter 17 277 1.4E-70 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 28 280 8.2E-75 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 SUPERFAMILY SSF54631 447 464 5.07E-23 T 29-03-2018 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 SUPERFAMILY SSF54631 312 417 5.07E-23 T 29-03-2018 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 5.1E-112 T 29-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 Gene3D G3DSA:3.10.580.10 289 468 4.0E-27 T 29-03-2018 AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 Pfam PF00571 CBS domain 313 365 6.6E-11 T 29-03-2018 IPR000644 CBS domain AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 Pfam PF00571 CBS domain 382 464 1.6E-4 T 29-03-2018 IPR000644 CBS domain AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 SMART SM00116 320 368 1.7E-7 T 29-03-2018 IPR000644 CBS domain AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 SMART SM00116 418 465 13.0 T 29-03-2018 IPR000644 CBS domain AL539_RS18685 7125e8d0d440f1d36ea81c52ed892d8c 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site AL539_RS05760 be1c25c6feb58a720224e5aa06060240 460 Gene3D G3DSA:1.10.760.10 58 229 7.8E-4 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS05760 be1c25c6feb58a720224e5aa06060240 460 Gene3D G3DSA:1.10.760.10 301 460 1.3E-25 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS05760 be1c25c6feb58a720224e5aa06060240 460 PIRSF PIRSF028099 5 460 2.0E-184 T 29-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL539_RS05760 be1c25c6feb58a720224e5aa06060240 460 SUPERFAMILY SSF46626 319 460 1.35E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS05760 be1c25c6feb58a720224e5aa06060240 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 1.6E-143 T 29-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 5.0E-30 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 PRINTS PR00050 Cold shock protein signature 43 61 3.0E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 PRINTS PR00050 Cold shock protein signature 28 37 3.0E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 PRINTS PR00050 Cold shock protein signature 7 22 3.0E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 Gene3D G3DSA:2.40.50.140 1 70 2.7E-29 T 29-03-2018 AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 SMART SM00357 6 70 9.3E-30 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 SUPERFAMILY SSF50249 4 69 2.79E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS14205 a59676c4febfb2120f6a5c3e98fed5f7 70 PIRSF PIRSF002599 1 70 8.5E-24 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL539_RS07275 437f30f37f300225406143a604412f2b 205 Pfam PF00005 ABC transporter 18 158 1.9E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS07275 437f30f37f300225406143a604412f2b 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 4.1E-77 T 29-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AL539_RS07275 437f30f37f300225406143a604412f2b 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS07275 437f30f37f300225406143a604412f2b 205 Gene3D G3DSA:3.40.50.300 1 197 1.7E-40 T 29-03-2018 AL539_RS07275 437f30f37f300225406143a604412f2b 205 SUPERFAMILY SSF52540 2 193 3.59E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07275 437f30f37f300225406143a604412f2b 205 SMART SM00382 26 205 4.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS06605 910275589d791464f7c8f4ee1ce7f314 315 SUPERFAMILY SSF47616 165 313 6.96E-36 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS06605 910275589d791464f7c8f4ee1ce7f314 315 Gene3D G3DSA:1.20.1050.10 177 315 4.1E-44 T 29-03-2018 AL539_RS06605 910275589d791464f7c8f4ee1ce7f314 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 4.0E-13 T 29-03-2018 AL539_RS06605 910275589d791464f7c8f4ee1ce7f314 315 SUPERFAMILY SSF52833 31 149 1.42E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS06605 910275589d791464f7c8f4ee1ce7f314 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.9E-22 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS06605 910275589d791464f7c8f4ee1ce7f314 315 PIRSF PIRSF015753 5 312 5.4E-136 T 29-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AL539_RS06605 910275589d791464f7c8f4ee1ce7f314 315 Gene3D G3DSA:3.40.30.10 31 176 7.4E-38 T 29-03-2018 AL539_RS19230 e5dc1b36706a99bb355cc061c6c3fb5b 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 2.8E-140 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AL539_RS19230 e5dc1b36706a99bb355cc061c6c3fb5b 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 6.6E-124 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL539_RS13640 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 3 129 8.1E-45 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL539_RS13640 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL539_RS13640 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 29-03-2018 AL539_RS13640 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.753 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL539_RS13640 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 29-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13640 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL539_RS13640 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 29-03-2018 IPR018102 Ribosomal S11, conserved site AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 Pfam PF06826 Predicted Permease Membrane Region 15 180 1.6E-30 T 29-03-2018 IPR006512 YidE/YbjL duplication AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 Pfam PF06826 Predicted Permease Membrane Region 393 562 4.4E-32 T 29-03-2018 IPR006512 YidE/YbjL duplication AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 397 548 7.0E-25 T 29-03-2018 IPR006512 YidE/YbjL duplication AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 SUPERFAMILY SSF116726 222 287 4.58E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 SUPERFAMILY SSF116726 309 379 1.57E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 Gene3D G3DSA:3.30.70.1450 220 293 3.4E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 Pfam PF02080 TrkA-C domain 223 286 1.0E-6 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 Gene3D G3DSA:3.30.70.1450 299 384 1.1E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS04675 de9be2c0d7db7e6a36d9aa92a6902536 571 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 2 564 2.8E-202 T 29-03-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 SMART SM00984 300 387 4.4E-14 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 SUPERFAMILY SSF51735 1 194 2.44E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.6E-27 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 Gene3D G3DSA:1.20.5.100 194 211 4.9E-14 T 29-03-2018 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 SUPERFAMILY SSF52413 283 387 2.88E-28 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 Gene3D G3DSA:3.40.50.720 1 193 1.1E-50 T 29-03-2018 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 PIRSF PIRSF500134 338 388 0.0017 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 PIRSF PIRSF500134 1 343 1.4E-122 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 Gene3D G3DSA:1.10.1040.10 212 287 4.5E-28 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 5.9E-9 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 SUPERFAMILY SSF48179 191 287 1.26E-30 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 1.4E-33 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 9.8E-107 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 PIRSF PIRSF000124 1 388 8.6E-138 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL539_RS13390 77a66d161282d6f1636c0c0048bc1160 388 Gene3D G3DSA:3.40.50.720 288 388 5.2E-18 T 29-03-2018 AL539_RS07980 e1cd6babaaa789f746ebc68249f2f511 384 Gene3D G3DSA:3.40.50.150 186 383 5.9E-26 T 29-03-2018 AL539_RS07980 e1cd6babaaa789f746ebc68249f2f511 384 PIRSF PIRSF037565 1 377 2.9E-171 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS07980 e1cd6babaaa789f746ebc68249f2f511 384 Pfam PF05175 Methyltransferase small domain 200 373 5.2E-53 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL539_RS07980 e1cd6babaaa789f746ebc68249f2f511 384 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.72 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS07980 e1cd6babaaa789f746ebc68249f2f511 384 SUPERFAMILY SSF53335 190 370 5.82E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS07980 e1cd6babaaa789f746ebc68249f2f511 384 Pfam PF08468 Methyltransferase small domain N-terminal 47 166 1.2E-5 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS08245 b15d2f06db4b1e16d644d98b2c86b1ba 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS08245 b15d2f06db4b1e16d644d98b2c86b1ba 568 SUPERFAMILY SSF56801 21 552 4.58E-108 T 29-03-2018 AL539_RS08245 b15d2f06db4b1e16d644d98b2c86b1ba 568 Gene3D G3DSA:3.40.50.980 193 366 1.1E-35 T 29-03-2018 AL539_RS08245 b15d2f06db4b1e16d644d98b2c86b1ba 568 Gene3D G3DSA:3.40.50.980 22 192 6.1E-31 T 29-03-2018 AL539_RS08245 b15d2f06db4b1e16d644d98b2c86b1ba 568 Pfam PF00501 AMP-binding enzyme 28 445 1.5E-85 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS08245 b15d2f06db4b1e16d644d98b2c86b1ba 568 Gene3D G3DSA:2.30.38.10 367 438 1.2E-18 T 29-03-2018 AL539_RS08245 b15d2f06db4b1e16d644d98b2c86b1ba 568 Gene3D G3DSA:3.30.300.30 440 555 6.6E-10 T 29-03-2018 AL539_RS20615 0a51d4e81ee5187a2c176a7b9a26db4c 440 Gene3D G3DSA:3.30.200.20 104 243 1.2E-20 T 29-03-2018 AL539_RS20615 0a51d4e81ee5187a2c176a7b9a26db4c 440 Pfam PF03109 ABC1 family 115 230 4.0E-29 T 29-03-2018 IPR004147 UbiB domain AL539_RS20615 0a51d4e81ee5187a2c176a7b9a26db4c 440 SUPERFAMILY SSF56112 193 325 6.94E-17 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS20615 0a51d4e81ee5187a2c176a7b9a26db4c 440 SUPERFAMILY SSF56112 98 160 6.94E-17 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS11105 6863284abc04c99aaace43f37c131ddb 447 PIRSF PIRSF006060 1 445 2.6E-48 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS11105 6863284abc04c99aaace43f37c131ddb 447 Pfam PF13520 Amino acid permease 8 421 1.6E-37 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS17930 f501ede5cb4c547ababe11175d4e86b3 321 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 11 306 1.7E-58 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AL539_RS17930 f501ede5cb4c547ababe11175d4e86b3 321 Pfam PF06996 Type VI secretion, TssG 11 306 5.2E-65 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 Gene3D G3DSA:2.30.42.10 367 455 8.5E-15 T 29-03-2018 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 Gene3D G3DSA:2.40.10.10 28 139 3.6E-31 T 29-03-2018 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 9.1E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 2.9E-31 T 29-03-2018 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 SMART SM00228 267 349 4.9E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 SMART SM00228 374 447 2.2E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 SUPERFAMILY SSF50156 225 350 1.1E-26 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.5E-56 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.5E-56 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.5E-56 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.5E-56 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.5E-56 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.5E-56 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 Pfam PF13180 PDZ domain 268 358 1.4E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 7.6E-163 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 Gene3D G3DSA:2.30.42.10 262 366 2.1E-29 T 29-03-2018 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 Gene3D G3DSA:2.40.10.10 140 257 2.4E-42 T 29-03-2018 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 SUPERFAMILY SSF50156 378 454 1.31E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14445 dbefec6bd4acafd34b1982dc40dbae96 455 SUPERFAMILY SSF50494 37 258 1.93E-64 T 29-03-2018 IPR009003 Peptidase S1, PA clan AL539_RS08360 a9e346cf58febf208928dc7e4a7b9346 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL539_RS08360 a9e346cf58febf208928dc7e4a7b9346 337 Pfam PF01136 Peptidase family U32 75 336 3.0E-69 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL539_RS08360 a9e346cf58febf208928dc7e4a7b9346 337 Gene3D G3DSA:3.20.20.150 10 335 4.1E-16 T 29-03-2018 AL539_RS05710 e831d80499bc8304cbcdf05c4e8491c5 428 PIRSF PIRSF006066 1 427 5.3E-74 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL539_RS05710 e831d80499bc8304cbcdf05c4e8491c5 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.2E-100 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_RS05710 e831d80499bc8304cbcdf05c4e8491c5 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.0E-105 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL539_RS04340 37271ae184c183109165e5064c7ea02b 323 Pfam PF16868 NMT1-like family 31 320 2.4E-97 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL539_RS04340 37271ae184c183109165e5064c7ea02b 323 Gene3D G3DSA:3.40.190.10 171 322 2.7E-36 T 29-03-2018 AL539_RS04340 37271ae184c183109165e5064c7ea02b 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 320 2.0E-120 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL539_RS04340 37271ae184c183109165e5064c7ea02b 323 SUPERFAMILY SSF53850 27 322 3.86E-90 T 29-03-2018 AL539_RS04340 37271ae184c183109165e5064c7ea02b 323 Gene3D G3DSA:3.40.190.10 23 164 8.8E-28 T 29-03-2018 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 SUPERFAMILY SSF50692 881 1003 6.1E-22 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 Gene3D G3DSA:2.20.25.90 66 158 5.9E-11 T 29-03-2018 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 SUPERFAMILY SSF53706 69 111 3.99E-115 T 29-03-2018 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 SUPERFAMILY SSF53706 138 883 3.99E-115 T 29-03-2018 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 SMART SM00926 72 154 1.5E-13 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 Gene3D G3DSA:3.40.50.740 159 329 5.2E-21 T 29-03-2018 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 Gene3D G3DSA:2.40.40.20 858 1030 1.4E-25 T 29-03-2018 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 695 4.2E-22 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 Gene3D G3DSA:3.40.50.740 464 802 1.3E-29 T 29-03-2018 AL539_RS06240 dc27ef535e8f842bbcf42f3cf20059b9 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 9.5E-11 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AL539_RS15680 d82d4243c5492a6e32f54a0770255587 197 SUPERFAMILY SSF116734 26 186 8.01E-21 T 29-03-2018 AL539_RS15680 d82d4243c5492a6e32f54a0770255587 197 Pfam PF01420 Type I restriction modification DNA specificity domain 42 170 9.1E-8 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS15680 d82d4243c5492a6e32f54a0770255587 197 Gene3D G3DSA:3.90.220.20 13 186 3.5E-19 T 29-03-2018 AL539_RS18145 0b54ec418aa9d9058588fa99dc6c60d2 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS18145 0b54ec418aa9d9058588fa99dc6c60d2 252 SUPERFAMILY SSF53790 6 250 1.13E-78 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS18145 0b54ec418aa9d9058588fa99dc6c60d2 252 Gene3D G3DSA:3.30.950.10 136 252 6.6E-38 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS18145 0b54ec418aa9d9058588fa99dc6c60d2 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 222 6.1E-48 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS18145 0b54ec418aa9d9058588fa99dc6c60d2 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS18145 0b54ec418aa9d9058588fa99dc6c60d2 252 Gene3D G3DSA:3.40.1010.10 11 135 6.1E-36 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS18145 0b54ec418aa9d9058588fa99dc6c60d2 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 11 244 1.8E-93 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS07780 953b27b8cfc5006a9c5bdfb251c207d0 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 6.0E-64 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 AL539_RS07780 953b27b8cfc5006a9c5bdfb251c207d0 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 1.6E-56 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 AL539_RS07780 953b27b8cfc5006a9c5bdfb251c207d0 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.317 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 AL539_RS13960 fcaff88343d530d386eca6d96698e133 126 Pfam PF04379 ApaG domain 18 103 2.0E-33 T 29-03-2018 IPR007474 ApaG domain AL539_RS13960 fcaff88343d530d386eca6d96698e133 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.686 T 29-03-2018 IPR023065 Uncharacterised protein family ApaG AL539_RS13960 fcaff88343d530d386eca6d96698e133 126 Gene3D G3DSA:2.60.40.1470 1 126 3.2E-42 T 29-03-2018 IPR007474 ApaG domain AL539_RS13960 fcaff88343d530d386eca6d96698e133 126 SUPERFAMILY SSF110069 5 126 8.11E-47 T 29-03-2018 IPR007474 ApaG domain AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 52 1.3E-18 T 29-03-2018 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS14310 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 29-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS06670 f391726ac000ad758c1d8d37f5c14053 114 SUPERFAMILY SSF47226 2 113 3.27E-24 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS06670 f391726ac000ad758c1d8d37f5c14053 114 Gene3D G3DSA:1.20.120.160 2 114 1.6E-15 T 29-03-2018 AL539_RS06670 f391726ac000ad758c1d8d37f5c14053 114 Pfam PF01627 Hpt domain 26 105 4.7E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AL539_RS21625 0fa35c22091ef9c38838a279193beac9 199 Gene3D G3DSA:1.10.357.10 54 189 1.9E-13 T 29-03-2018 AL539_RS21625 0fa35c22091ef9c38838a279193beac9 199 SUPERFAMILY SSF46689 4 82 8.21E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS21625 0fa35c22091ef9c38838a279193beac9 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 2.5E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS21625 0fa35c22091ef9c38838a279193beac9 199 SUPERFAMILY SSF48498 79 176 1.27E-15 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS21625 0fa35c22091ef9c38838a279193beac9 199 Gene3D G3DSA:1.10.10.60 2 53 1.6E-11 T 29-03-2018 AL539_RS05550 3372010696093c483ed97e756bfb9c93 195 Gene3D G3DSA:1.10.3210.10 1 195 2.8E-44 T 29-03-2018 AL539_RS05550 3372010696093c483ed97e756bfb9c93 195 Pfam PF13023 HD domain 15 172 8.7E-52 T 29-03-2018 IPR006674 HD domain AL539_RS05550 3372010696093c483ed97e756bfb9c93 195 SUPERFAMILY SSF109604 4 182 5.1E-43 T 29-03-2018 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 SUPERFAMILY SSF55021 79 162 6.27E-27 T 29-03-2018 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 Gene3D G3DSA:3.30.70.260 1 87 2.8E-26 T 29-03-2018 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 SUPERFAMILY SSF55021 1 75 6.87E-23 T 29-03-2018 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 Gene3D G3DSA:3.30.70.1150 88 161 1.2E-26 T 29-03-2018 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 4.0E-37 T 29-03-2018 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.5E-25 T 29-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 3.1E-64 T 29-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL539_RS14050 217b767c942babec9fd2df1f6f4491e9 164 Pfam PF13710 ACT domain 11 73 1.8E-17 T 29-03-2018 AL539_RS24100 21de71f873fa7f88cbdf8752ddddd47f 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS24100 21de71f873fa7f88cbdf8752ddddd47f 249 Pfam PF00005 ABC transporter 19 174 1.1E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24100 21de71f873fa7f88cbdf8752ddddd47f 249 SUPERFAMILY SSF52540 4 236 1.05E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24100 21de71f873fa7f88cbdf8752ddddd47f 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 2.2E-126 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL539_RS24100 21de71f873fa7f88cbdf8752ddddd47f 249 SMART SM00382 28 220 1.3E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24100 21de71f873fa7f88cbdf8752ddddd47f 249 Gene3D G3DSA:3.40.50.300 1 247 9.4E-59 T 29-03-2018 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 29-03-2018 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 29-03-2018 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 29-03-2018 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 29-03-2018 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 29-03-2018 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 Gene3D G3DSA:3.30.230.10 1 164 2.9E-26 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 PIRSF PIRSF000676 1 316 6.1E-80 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 8.2E-110 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.9E-13 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 30.228 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 Pfam PF08544 GHMP kinases C terminal 218 291 1.9E-9 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 SUPERFAMILY SSF55060 178 294 4.32E-33 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 SUPERFAMILY SSF54211 3 191 5.01E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS14760 b4e7f4667e40880c5e4308ea8590ca04 318 Gene3D G3DSA:3.30.70.890 173 317 2.1E-29 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AL539_RS14380 d31d6ceb8e692adb76072a03521eecc3 510 Gene3D G3DSA:2.40.320.10 1 216 7.7E-43 T 29-03-2018 AL539_RS14380 d31d6ceb8e692adb76072a03521eecc3 510 SMART SM01118 2 208 6.7E-43 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL539_RS14380 d31d6ceb8e692adb76072a03521eecc3 510 SMART SM00880 234 502 1.5E-21 T 29-03-2018 IPR007899 CHAD domain AL539_RS14380 d31d6ceb8e692adb76072a03521eecc3 510 Pfam PF01928 CYTH domain 3 202 2.5E-31 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL539_RS14380 d31d6ceb8e692adb76072a03521eecc3 510 SUPERFAMILY SSF55154 1 218 8.67E-51 T 29-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AL539_RS14380 d31d6ceb8e692adb76072a03521eecc3 510 Pfam PF05235 CHAD domain 236 427 2.0E-8 T 29-03-2018 IPR007899 CHAD domain AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 Gene3D G3DSA:1.10.10.10 2 138 4.2E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 SUPERFAMILY SSF46785 8 135 1.17E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 Pfam PF12802 MarR family 28 85 2.0E-13 T 29-03-2018 AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 6.4E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 6.4E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 6.4E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 6.4E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 SUPERFAMILY SSF55729 144 301 4.8E-28 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 Gene3D G3DSA:3.40.630.30 139 299 5.6E-26 T 29-03-2018 AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 Pfam PF00583 Acetyltransferase (GNAT) family 191 278 2.7E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS09830 0bfe2e62e57b1839559fbcc63f09c220 301 SMART SM00347 22 121 1.2E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 4.5E-5 T 29-03-2018 AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 4.5E-5 T 29-03-2018 AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 4.5E-5 T 29-03-2018 AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 SUPERFAMILY SSF53335 34 189 3.44E-33 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 54.079 T 29-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 Gene3D G3DSA:3.40.50.150 30 233 9.9E-38 T 29-03-2018 AL539_RS14820 b5030fda9bb3c948331990c6d5495ba1 239 Pfam PF05175 Methyltransferase small domain 39 129 1.4E-17 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL539_RS07545 8e71efd521d117c28e0a53a05decfc7b 81 Gene3D G3DSA:3.30.110.40 2 78 6.7E-18 T 29-03-2018 IPR001455 TusA-like domain AL539_RS07545 8e71efd521d117c28e0a53a05decfc7b 81 Pfam PF01206 Sulfurtransferase TusA 6 75 9.2E-9 T 29-03-2018 IPR001455 TusA-like domain AL539_RS07545 8e71efd521d117c28e0a53a05decfc7b 81 SUPERFAMILY SSF64307 4 73 1.44E-7 T 29-03-2018 IPR001455 TusA-like domain AL539_RS22515 62a30c9d7a267cadb68899432c2578a6 266 Gene3D G3DSA:3.40.50.1360 1 266 3.4E-85 T 29-03-2018 AL539_RS22515 62a30c9d7a267cadb68899432c2578a6 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.6E-141 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AL539_RS22515 62a30c9d7a267cadb68899432c2578a6 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.11 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AL539_RS22515 62a30c9d7a267cadb68899432c2578a6 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 218 1.5E-20 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL539_RS22515 62a30c9d7a267cadb68899432c2578a6 266 SUPERFAMILY SSF100950 1 263 4.37E-103 T 29-03-2018 AL539_RS22515 62a30c9d7a267cadb68899432c2578a6 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 SUPERFAMILY SSF53901 210 391 1.08E-46 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 351 1.0E-27 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 SMART SM00825 Beta-ketoacyl synthase 61 338 9.7E-10 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 Gene3D G3DSA:3.40.47.10 248 395 1.2E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 100 236 3.8E-20 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 SUPERFAMILY SSF53901 7 236 1.1E-38 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS16970 1dba2dd54f4419a3095630dc262c8e1f 395 Gene3D G3DSA:3.40.47.10 4 241 1.6E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS25230 4d7a3c43f46658b21d6cc8865be5a7da 195 Pfam PF13489 Methyltransferase domain 39 176 7.4E-15 T 29-03-2018 AL539_RS25230 4d7a3c43f46658b21d6cc8865be5a7da 195 SUPERFAMILY SSF53335 9 190 1.53E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS25230 4d7a3c43f46658b21d6cc8865be5a7da 195 Gene3D G3DSA:3.40.50.150 1 190 7.1E-25 T 29-03-2018 AL539_RS19000 e578d7d083b26134a228e9ef8ad6b9f7 139 Gene3D G3DSA:1.10.1660.10 61 134 8.1E-10 T 29-03-2018 AL539_RS19000 e578d7d083b26134a228e9ef8ad6b9f7 139 Pfam PF13411 MerR HTH family regulatory protein 5 72 2.7E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19000 e578d7d083b26134a228e9ef8ad6b9f7 139 Gene3D G3DSA:1.10.1660.10 1 60 2.9E-14 T 29-03-2018 AL539_RS19000 e578d7d083b26134a228e9ef8ad6b9f7 139 SUPERFAMILY SSF46955 5 126 9.52E-23 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS19000 e578d7d083b26134a228e9ef8ad6b9f7 139 SMART SM00422 5 73 4.5E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19300 943674dab3bb881cdb9701ca567be0bb 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.1E-60 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL539_RS19300 943674dab3bb881cdb9701ca567be0bb 327 SUPERFAMILY SSF52540 5 302 6.81E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19300 943674dab3bb881cdb9701ca567be0bb 327 PIRSF PIRSF002849 1 327 4.2E-128 T 29-03-2018 AL539_RS19300 943674dab3bb881cdb9701ca567be0bb 327 Gene3D G3DSA:3.40.50.300 19 187 1.9E-27 T 29-03-2018 AL539_RS19300 943674dab3bb881cdb9701ca567be0bb 327 Gene3D G3DSA:1.10.8.300 208 324 1.3E-31 T 29-03-2018 AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 SMART SM00382 34 217 2.1E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 Pfam PF08402 TOBE domain 283 361 2.8E-16 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 Gene3D G3DSA:3.40.50.300 4 253 1.6E-74 T 29-03-2018 AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 SUPERFAMILY SSF52540 9 246 3.55E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 359 1.6E-118 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 SUPERFAMILY SSF50331 242 361 7.65E-18 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL539_RS02510 d4209ab651b3db5b7200c304aa67d27f 373 Pfam PF00005 ABC transporter 26 167 4.1E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS18720 3b63fa06dc7fdb74246e72871fed01a0 200 PIRSF PIRSF011489 1 196 1.2E-82 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL539_RS18720 3b63fa06dc7fdb74246e72871fed01a0 200 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 5.5E-30 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL539_RS08520 776728955e4d89557e40b5890d2a0ba2 341 Gene3D G3DSA:3.40.50.150 155 341 8.2E-26 T 29-03-2018 AL539_RS08520 776728955e4d89557e40b5890d2a0ba2 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS08520 776728955e4d89557e40b5890d2a0ba2 341 SUPERFAMILY SSF53335 153 330 1.76E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS08520 776728955e4d89557e40b5890d2a0ba2 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.527 T 29-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS08520 776728955e4d89557e40b5890d2a0ba2 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 1.7E-56 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS08520 776728955e4d89557e40b5890d2a0ba2 341 Pfam PF05175 Methyltransferase small domain 172 336 2.9E-61 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AL539_RS02010 213cc65cccc08a4a9395cb3026f2f293 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.587 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL539_RS02010 213cc65cccc08a4a9395cb3026f2f293 383 Gene3D G3DSA:1.20.1530.10 3 379 9.5E-148 T 29-03-2018 IPR023171 Na/H antiporter domain AL539_RS02010 213cc65cccc08a4a9395cb3026f2f293 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 8.8E-145 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL539_RS02010 213cc65cccc08a4a9395cb3026f2f293 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.6E-193 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 SUPERFAMILY SSF48403 11 164 1.13E-21 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 PRINTS PR01415 Ankyrin repeat signature 73 88 1.9E-6 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 PRINTS PR01415 Ankyrin repeat signature 120 134 1.9E-6 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 Gene3D G3DSA:1.20.120.660 117 168 4.1E-5 T 29-03-2018 AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 Pfam PF12796 Ankyrin repeats (3 copies) 43 133 4.6E-15 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 Gene3D G3DSA:1.25.40.20 1 116 5.8E-23 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 SMART SM00248 72 101 0.11 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 SMART SM00248 34 67 88.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL539_RS03705 cd3dddb338d09f55f3600a3e068f00fd 168 SMART SM00248 104 133 0.15 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AL539_RS08970 4c1e5be21747879d1f2cd2e4743c31c1 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.254 T 29-03-2018 IPR023081 Cell division protein FtsB AL539_RS08970 4c1e5be21747879d1f2cd2e4743c31c1 93 Pfam PF04977 Septum formation initiator 11 89 7.1E-29 T 29-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AL539_RS14980 810d298a694a596eeec97eb3679eeacb 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.2E-21 T 29-03-2018 IPR025299 CstA, C-terminal domain AL539_RS14980 810d298a694a596eeec97eb3679eeacb 494 Pfam PF02554 Carbon starvation protein CstA 4 144 6.4E-33 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL539_RS14980 810d298a694a596eeec97eb3679eeacb 494 Pfam PF02554 Carbon starvation protein CstA 156 293 7.1E-20 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL539_RS09550 a9b56ea13fd91011a924075698d65e1d 173 Gene3D G3DSA:3.40.630.30 1 171 1.8E-18 T 29-03-2018 AL539_RS09550 a9b56ea13fd91011a924075698d65e1d 173 Pfam PF13673 Acetyltransferase (GNAT) domain 39 138 5.6E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS09550 a9b56ea13fd91011a924075698d65e1d 173 SUPERFAMILY SSF55729 1 146 1.63E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS24365 0b7a5260506a14c6895095b58a0aa057 177 Gene3D G3DSA:3.30.1950.10 32 94 2.0E-14 T 29-03-2018 AL539_RS24365 0b7a5260506a14c6895095b58a0aa057 177 Pfam PF10531 SLBB domain 105 158 1.0E-16 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS24365 0b7a5260506a14c6895095b58a0aa057 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 4.1E-17 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL539_RS24365 0b7a5260506a14c6895095b58a0aa057 177 Gene3D G3DSA:3.10.560.10 95 174 6.1E-17 T 29-03-2018 AL539_RS24365 0b7a5260506a14c6895095b58a0aa057 177 SUPERFAMILY SSF142984 103 139 6.02E-5 T 29-03-2018 AL539_RS24855 d7ea70a1dad6f34438be0e7a03d5fdbd 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS24855 d7ea70a1dad6f34438be0e7a03d5fdbd 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS24855 d7ea70a1dad6f34438be0e7a03d5fdbd 113 SUPERFAMILY SSF46785 16 104 2.02E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24855 d7ea70a1dad6f34438be0e7a03d5fdbd 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS24855 d7ea70a1dad6f34438be0e7a03d5fdbd 113 Gene3D G3DSA:1.10.10.10 1 108 7.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24855 d7ea70a1dad6f34438be0e7a03d5fdbd 113 SMART SM00418 28 106 8.5E-11 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL539_RS16050 55b7983f3d87a55050d0ac6c3c6a1d42 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 189 4.2E-35 T 29-03-2018 IPR003740 Uncharacterised membrane protein YitT AL539_RS22940 995b8e746367699260edcffc9cc6aa48 80 SUPERFAMILY SSF143120 1 64 1.7E-10 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS22940 995b8e746367699260edcffc9cc6aa48 80 Gene3D G3DSA:3.40.1620.10 1 54 6.2E-7 T 29-03-2018 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.2E-256 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 Pfam PF01578 Cytochrome C assembly protein 89 297 2.4E-54 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-62 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-62 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-62 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.1E-62 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-62 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-62 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-62 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07250 88e5ae2a654d9996b537ba692006ceb6 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.1E-126 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.6E-64 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 Gene3D G3DSA:3.50.50.60 1 164 7.7E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 5.1E-215 T 29-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PIRSF PIRSF000350 1 445 2.1E-82 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.1E-29 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.1E-29 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.1E-29 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.1E-29 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-29 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 SUPERFAMILY SSF51905 1 365 4.97E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 2.5E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 Gene3D G3DSA:3.30.390.30 325 451 2.0E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.3E-33 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 Gene3D G3DSA:3.40.50.720 165 324 7.3E-35 T 29-03-2018 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL539_RS12565 d89c6e6ef431e0f6f0be9d9648079adf 451 SUPERFAMILY SSF55424 337 451 4.3E-35 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.20.200.10 118 391 1.1E-84 T 29-03-2018 AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF00206 Lyase 14 313 4.2E-75 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 SUPERFAMILY SSF48557 4 448 5.5E-109 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.9E-18 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.9E-18 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 3.9E-18 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 3.9E-18 T 29-03-2018 IPR000362 Fumarate lyase family AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.40.30 392 446 3.7E-32 T 29-03-2018 AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 1.3E-151 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.6E-52 T 29-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AL539_RS01585 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.275.10 1 117 5.4E-43 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 5.1E-191 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 1.2E-178 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 SMART SM00788 4 431 0.0 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 219.812 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 29-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 29-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 SUPERFAMILY SSF52540 3 436 1.7E-179 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 Gene3D G3DSA:3.40.440.10 1 151 4.2E-56 T 29-03-2018 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 Gene3D G3DSA:3.40.440.10 152 266 3.0E-27 T 29-03-2018 AL539_RS10625 3de5dfdff42157e12a12467a2e97fdb7 438 Gene3D G3DSA:3.90.170.10 267 438 1.7E-64 T 29-03-2018 AL539_RS04525 80f8bc2351fa94d57a8496ffa1abbc2c 67 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 63 1.2E-11 T 29-03-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AL539_RS04525 80f8bc2351fa94d57a8496ffa1abbc2c 67 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 62 9.4E-12 T 29-03-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AL539_RS10220 c9825ad1307c9c0fe6d623005d4570e7 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.4E-45 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL539_RS10220 c9825ad1307c9c0fe6d623005d4570e7 139 SUPERFAMILY SSF111038 1 139 6.02E-50 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL539_RS10220 c9825ad1307c9c0fe6d623005d4570e7 139 Gene3D G3DSA:2.60.120.460 1 139 7.7E-61 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL539_RS10220 c9825ad1307c9c0fe6d623005d4570e7 139 PIRSF PIRSF004681 1 139 3.7E-47 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL539_RS10220 c9825ad1307c9c0fe6d623005d4570e7 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 1.0E-39 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL539_RS10220 c9825ad1307c9c0fe6d623005d4570e7 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AL539_RS21410 ea422d40eee1b86495f924439b205e1c 599 Pfam PF02254 TrkA-N domain 399 490 2.8E-8 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS21410 ea422d40eee1b86495f924439b205e1c 599 Pfam PF00999 Sodium/hydrogen exchanger family 16 386 2.2E-33 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL539_RS21410 ea422d40eee1b86495f924439b205e1c 599 Gene3D G3DSA:3.40.50.720 396 507 1.4E-5 T 29-03-2018 AL539_RS21410 ea422d40eee1b86495f924439b205e1c 599 SUPERFAMILY SSF51735 399 491 6.38E-8 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 Gene3D G3DSA:3.40.50.980 2 178 2.7E-39 T 29-03-2018 AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 1.7E-16 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 Pfam PF00501 AMP-binding enzyme 8 416 7.7E-115 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 Gene3D G3DSA:3.30.300.30 409 511 1.3E-26 T 29-03-2018 AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 Gene3D G3DSA:3.40.50.980 179 326 1.0E-52 T 29-03-2018 AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 SUPERFAMILY SSF56801 4 508 3.79E-162 T 29-03-2018 AL539_RS06000 85fcd6aa2086ef821fb828d045c63a6f 513 Gene3D G3DSA:2.30.38.10 327 408 2.7E-30 T 29-03-2018 AL539_RS01770 7477ab4d52356651824d7ebd6a17bd4a 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.8E-16 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS01770 7477ab4d52356651824d7ebd6a17bd4a 331 SMART SM00382 32 230 5.0E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS01770 7477ab4d52356651824d7ebd6a17bd4a 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.4E-20 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS01770 7477ab4d52356651824d7ebd6a17bd4a 331 Pfam PF00005 ABC transporter 24 187 3.8E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS01770 7477ab4d52356651824d7ebd6a17bd4a 331 SUPERFAMILY SSF52540 4 268 9.84E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01770 7477ab4d52356651824d7ebd6a17bd4a 331 Gene3D G3DSA:3.40.50.300 1 331 1.7E-55 T 29-03-2018 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 Gene3D G3DSA:3.40.190.10 94 179 6.0E-34 T 29-03-2018 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 9.1E-106 T 29-03-2018 IPR017685 HTH-type transcriptional regulator ArgP AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 SUPERFAMILY SSF53850 94 295 6.88E-22 T 29-03-2018 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 SUPERFAMILY SSF46785 4 112 4.63E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.362 T 29-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 Pfam PF03466 LysR substrate binding domain 95 271 3.5E-15 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 Gene3D G3DSA:3.40.190.10 180 266 2.2E-10 T 29-03-2018 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 60 1.4E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS09155 fcffec474b61cee8e33125fe438139c7 298 Gene3D G3DSA:1.10.10.10 1 88 1.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 5.0E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 Pfam PF00114 Pilin (bacterial filament) 41 142 1.0E-10 T 29-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 3.6E-11 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 SUPERFAMILY SSF54523 12 142 1.57E-24 T 29-03-2018 AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 Gene3D G3DSA:3.30.700.10 12 146 4.8E-26 T 29-03-2018 AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 5.8E-12 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL539_RS08735 fb4a77f62f06491ad2d9a07a670da6da 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 5.8E-12 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL539_RS00045 8ef124f34d92e466c3d7ee2d6b2235ba 234 SUPERFAMILY SSF52833 96 231 6.5E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS00045 8ef124f34d92e466c3d7ee2d6b2235ba 234 Pfam PF10411 Disulfide bond isomerase protein N-terminus 31 75 1.4E-8 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL539_RS00045 8ef124f34d92e466c3d7ee2d6b2235ba 234 Gene3D G3DSA:3.40.30.10 98 232 4.6E-12 T 29-03-2018 AL539_RS00045 8ef124f34d92e466c3d7ee2d6b2235ba 234 Pfam PF13098 Thioredoxin-like domain 109 215 2.9E-11 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS00045 8ef124f34d92e466c3d7ee2d6b2235ba 234 Gene3D G3DSA:3.10.450.70 17 76 1.1E-9 T 29-03-2018 AL539_RS00045 8ef124f34d92e466c3d7ee2d6b2235ba 234 SUPERFAMILY SSF54423 27 77 3.14E-9 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL539_RS10345 c047366b331b50ff488329759caa3117 263 PIRSF PIRSF000728 1 263 2.1E-69 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS10345 c047366b331b50ff488329759caa3117 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 7.6E-63 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS10345 c047366b331b50ff488329759caa3117 263 SUPERFAMILY SSF53633 9 261 7.07E-58 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS10345 c047366b331b50ff488329759caa3117 263 Pfam PF00696 Amino acid kinase family 9 238 3.0E-35 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS10345 c047366b331b50ff488329759caa3117 263 Gene3D G3DSA:3.40.1160.10 6 262 1.6E-42 T 29-03-2018 AL539_RS10345 c047366b331b50ff488329759caa3117 263 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.353 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01021 OMPA domain signature 263 279 1.5E-15 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01021 OMPA domain signature 248 263 1.5E-15 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01021 OMPA domain signature 218 240 1.5E-15 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 SUPERFAMILY SSF56925 24 181 1.23E-33 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 Gene3D G3DSA:3.30.1330.60 199 329 6.0E-43 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 Gene3D G3DSA:2.40.160.20 5 198 3.0E-35 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 Pfam PF13505 Outer membrane protein beta-barrel domain 6 181 2.3E-26 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 Pfam PF00691 OmpA family 217 312 9.1E-25 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 ProSitePatterns PS01068 OmpA-like domain. 250 294 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 301 321 5.8E-11 T 29-03-2018 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 263 280 5.8E-11 T 29-03-2018 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 281 300 5.8E-11 T 29-03-2018 AL539_RS20295 4883a65d64501f4df5becd235eed41c9 330 SUPERFAMILY SSF103088 211 318 6.93E-38 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS11035 921308bb3952c24cd623a116866816a7 523 Gene3D G3DSA:3.40.50.300 4 285 5.6E-50 T 29-03-2018 AL539_RS11035 921308bb3952c24cd623a116866816a7 523 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS11035 921308bb3952c24cd623a116866816a7 523 Pfam PF00005 ABC transporter 340 465 1.7E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS11035 921308bb3952c24cd623a116866816a7 523 Pfam PF00005 ABC transporter 19 188 2.1E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS11035 921308bb3952c24cd623a116866816a7 523 SMART SM00382 28 235 7.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS11035 921308bb3952c24cd623a116866816a7 523 SMART SM00382 345 511 8.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS11035 921308bb3952c24cd623a116866816a7 523 SUPERFAMILY SSF52540 7 238 3.27E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11035 921308bb3952c24cd623a116866816a7 523 Pfam PF12848 ABC transporter 228 305 3.2E-17 T 29-03-2018 IPR032781 ABC-transporter extension domain AL539_RS11035 921308bb3952c24cd623a116866816a7 523 SUPERFAMILY SSF52540 339 507 4.17E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11035 921308bb3952c24cd623a116866816a7 523 Gene3D G3DSA:3.40.50.300 286 522 3.8E-40 T 29-03-2018 AL539_RS08630 c55ab63e6f863134b30df430c27e4d81 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.456 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AL539_RS08630 c55ab63e6f863134b30df430c27e4d81 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 2.3E-75 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AL539_RS08630 c55ab63e6f863134b30df430c27e4d81 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 230 1.4E-77 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AL539_RS08960 d28c37bdf883460d6f65223cd48fae4d 158 Pfam PF02542 YgbB family 2 155 1.6E-65 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL539_RS08960 d28c37bdf883460d6f65223cd48fae4d 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.6E-68 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL539_RS08960 d28c37bdf883460d6f65223cd48fae4d 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.984 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL539_RS08960 d28c37bdf883460d6f65223cd48fae4d 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 29-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL539_RS08960 d28c37bdf883460d6f65223cd48fae4d 158 SUPERFAMILY SSF69765 1 157 1.07E-65 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL539_RS08960 d28c37bdf883460d6f65223cd48fae4d 158 Gene3D G3DSA:3.30.1330.50 1 158 6.0E-72 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL539_RS13550 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.8E-40 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL539_RS13550 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13550 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 110 7.9E-46 T 29-03-2018 AL539_RS13550 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL539_RS13550 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13550 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 29-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS11270 d1b6187d2090e1d58564e3ea63081941 153 Gene3D G3DSA:3.40.630.30 15 122 1.0E-8 T 29-03-2018 AL539_RS11270 d1b6187d2090e1d58564e3ea63081941 153 Pfam PF13508 Acetyltransferase (GNAT) domain 39 112 1.4E-7 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS11270 d1b6187d2090e1d58564e3ea63081941 153 SUPERFAMILY SSF55729 5 120 1.62E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS07905 83bd55ec0f6fbf04fdb44407a78cd1e4 247 Gene3D G3DSA:1.20.120.20 61 238 5.0E-5 T 29-03-2018 AL539_RS07905 83bd55ec0f6fbf04fdb44407a78cd1e4 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 2.9E-72 T 29-03-2018 IPR021307 Protein of unknown function DUF2884 AL539_RS23275 38cb2b0741706507ae220f5f41ab6dd1 817 SUPERFAMILY SSF53756 8 815 0.0 T 29-03-2018 AL539_RS23275 38cb2b0741706507ae220f5f41ab6dd1 817 Gene3D G3DSA:3.40.50.2000 2 481 1.7E-188 T 29-03-2018 AL539_RS23275 38cb2b0741706507ae220f5f41ab6dd1 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL539_RS23275 38cb2b0741706507ae220f5f41ab6dd1 817 PIRSF PIRSF000460 1 817 5.0E-215 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL539_RS23275 38cb2b0741706507ae220f5f41ab6dd1 817 Gene3D G3DSA:3.40.50.2000 482 797 7.0E-130 T 29-03-2018 AL539_RS23275 38cb2b0741706507ae220f5f41ab6dd1 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL539_RS23275 38cb2b0741706507ae220f5f41ab6dd1 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL539_RS08795 caa1bfc6d6619b2c6542210cd924b446 264 Pfam PF01578 Cytochrome C assembly protein 39 262 2.1E-46 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL539_RS07375 8cb0dd913c9c17308826881d34c3d508 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 5.1E-20 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL539_RS19860 697495208d88f0cc0dd56481948a2acb 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 2.1E-15 T 29-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AL539_RS19860 697495208d88f0cc0dd56481948a2acb 92 PIRSF PIRSF028784 1 92 2.2E-28 T 29-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AL539_RS15860 a5ec8c828b8c481892e21f16b6ab0f78 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 6.0E-229 T 29-03-2018 IPR010520 UPF0255 family AL539_RS15860 a5ec8c828b8c481892e21f16b6ab0f78 415 Gene3D G3DSA:3.40.50.1820 150 400 7.5E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS15860 a5ec8c828b8c481892e21f16b6ab0f78 415 SUPERFAMILY SSF53474 47 411 2.34E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS15860 a5ec8c828b8c481892e21f16b6ab0f78 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.133 T 29-03-2018 IPR010520 UPF0255 family AL539_RS15860 a5ec8c828b8c481892e21f16b6ab0f78 415 Gene3D G3DSA:1.20.1440.110 49 149 6.0E-18 T 29-03-2018 AL539_RS00340 8deda9ab4bcf1cf7104a76e2e1fd182b 197 Pfam PF00589 Phage integrase family 31 182 2.3E-17 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00340 8deda9ab4bcf1cf7104a76e2e1fd182b 197 Gene3D G3DSA:1.10.443.10 12 193 5.0E-24 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00340 8deda9ab4bcf1cf7104a76e2e1fd182b 197 SUPERFAMILY SSF56349 10 194 7.65E-37 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS24765 93b60061119ce46af41998e622a9a8e9 179 Pfam PF13302 Acetyltransferase (GNAT) domain 6 139 3.4E-21 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS24765 93b60061119ce46af41998e622a9a8e9 179 Gene3D G3DSA:3.40.630.30 4 173 3.4E-39 T 29-03-2018 AL539_RS24765 93b60061119ce46af41998e622a9a8e9 179 SUPERFAMILY SSF55729 4 164 1.92E-42 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS21640 5326c636319a248966fcf2b40e0e9348 654 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS21640 5326c636319a248966fcf2b40e0e9348 654 Pfam PF00005 ABC transporter 25 173 2.1E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS21640 5326c636319a248966fcf2b40e0e9348 654 Pfam PF02687 FtsX-like permease family 559 647 1.3E-11 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS21640 5326c636319a248966fcf2b40e0e9348 654 Pfam PF12704 MacB-like periplasmic core domain 279 496 1.0E-40 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AL539_RS21640 5326c636319a248966fcf2b40e0e9348 654 SUPERFAMILY SSF52540 5 236 4.15E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21640 5326c636319a248966fcf2b40e0e9348 654 SMART SM00382 34 221 1.1E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS21640 5326c636319a248966fcf2b40e0e9348 654 Gene3D G3DSA:3.40.50.300 1 257 3.3E-67 T 29-03-2018 AL539_RS23640 b6ae38adb9d776202ddbe41cb2a4b3ed 357 Pfam PF02120 Flagellar hook-length control protein FliK 238 317 1.6E-20 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 SMART SM00388 222 286 1.7E-4 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 SMART SM00304 168 221 1.3E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 Gene3D G3DSA:1.10.287.130 212 282 3.4E-9 T 29-03-2018 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 Gene3D G3DSA:3.30.565.10 283 440 6.3E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 SUPERFAMILY SSF47384 205 284 6.08E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 SUPERFAMILY SSF55874 326 437 1.7E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 283 3.6E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 2.3E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 SMART SM00387 330 440 2.1E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.2E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.2E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.2E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS20575 13063cf1700c252ac8a811379ee352cb 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.2E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS19760 5b291354031b1dcddbb4984588d5116f 64 SUPERFAMILY SSF46626 9 54 1.98E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS19580 f94dd8c4d44bb5be9766f4f07c9db88d 280 Gene3D G3DSA:1.10.3720.10 82 278 5.5E-32 T 29-03-2018 AL539_RS19580 f94dd8c4d44bb5be9766f4f07c9db88d 280 SUPERFAMILY SSF161098 88 272 1.7E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS19580 f94dd8c4d44bb5be9766f4f07c9db88d 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 1.1E-126 T 29-03-2018 IPR017784 ABC transporter, choline, permease protein AL539_RS19580 f94dd8c4d44bb5be9766f4f07c9db88d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 6.7E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS10400 250fda2232792a4c5e9a6773babd6de7 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 3.0E-13 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_RS17545 fd5555a7000e403ca00cd6d100a71a0e 225 Gene3D G3DSA:1.10.3720.10 2 222 1.0E-38 T 29-03-2018 AL539_RS17545 fd5555a7000e403ca00cd6d100a71a0e 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 1.5E-22 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS17545 fd5555a7000e403ca00cd6d100a71a0e 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 217 1.2E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS17545 fd5555a7000e403ca00cd6d100a71a0e 225 SUPERFAMILY SSF161098 11 203 7.85E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS09935 dbf69108022181cc556cffadcf9aaed5 241 SMART SM00382 28 231 9.7E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS09935 dbf69108022181cc556cffadcf9aaed5 241 Gene3D G3DSA:3.40.50.300 1 238 6.0E-64 T 29-03-2018 AL539_RS09935 dbf69108022181cc556cffadcf9aaed5 241 Pfam PF00005 ABC transporter 20 166 2.2E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS09935 dbf69108022181cc556cffadcf9aaed5 241 SUPERFAMILY SSF52540 3 237 2.32E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09935 dbf69108022181cc556cffadcf9aaed5 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.0E-9 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL539_RS09935 dbf69108022181cc556cffadcf9aaed5 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS09935 dbf69108022181cc556cffadcf9aaed5 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 6.8E-126 T 29-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AL539_RS16745 b24434898e249e00164570840d27854b 180 SUPERFAMILY SSF82808 67 179 2.88E-49 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL539_RS16745 b24434898e249e00164570840d27854b 180 SUPERFAMILY SSF47598 1 35 4.67E-14 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL539_RS16745 b24434898e249e00164570840d27854b 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.4E-24 T 29-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AL539_RS16745 b24434898e249e00164570840d27854b 180 Gene3D G3DSA:1.20.1380.10 75 176 6.7E-42 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL539_RS16745 b24434898e249e00164570840d27854b 180 Gene3D G3DSA:1.10.1220.10 1 37 3.1E-25 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL539_RS16745 b24434898e249e00164570840d27854b 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 1.3E-46 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL539_RS16745 b24434898e249e00164570840d27854b 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 42.491 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL539_RS16745 b24434898e249e00164570840d27854b 180 PIRSF PIRSF019401 1 180 2.4E-55 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL539_RS02285 21a4de2d946817a85eab8a4aad1692b4 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.677 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL539_RS02285 21a4de2d946817a85eab8a4aad1692b4 105 Gene3D G3DSA:3.30.110.70 1 103 2.2E-34 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 AL539_RS02285 21a4de2d946817a85eab8a4aad1692b4 105 Pfam PF01906 Putative heavy-metal-binding 1 103 1.3E-38 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL539_RS02285 21a4de2d946817a85eab8a4aad1692b4 105 SUPERFAMILY SSF117782 1 104 3.53E-37 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL539_RS17095 05a8fed10b39c894c9d86369b37f630e 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 2.1E-27 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Gene3D G3DSA:3.20.20.80 330 817 7.6E-122 T 29-03-2018 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.9E-13 T 29-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Gene3D G3DSA:2.60.40.290 25 167 4.3E-36 T 29-03-2018 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 SUPERFAMILY SSF51445 332 772 9.69E-144 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.2E-48 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 4.8E-62 T 29-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 1.5E-109 T 29-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 SMART SM01081 34 195 1.6E-91 T 29-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 SUPERFAMILY SSF55545 208 331 2.24E-23 T 29-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 SUPERFAMILY SSF49384 26 198 2.72E-65 T 29-03-2018 IPR008965 Carbohydrate-binding domain GO:0030246 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Gene3D G3DSA:2.60.40.10 818 882 4.4E-8 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 7.1E-28 T 29-03-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 SUPERFAMILY SSF81296 781 882 1.68E-37 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS16360 81f8fd51b5aca0fd55d5e42f03d15450 883 Gene3D G3DSA:3.30.379.10 204 329 5.5E-14 T 29-03-2018 AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 Gene3D G3DSA:3.40.50.720 1 272 3.8E-51 T 29-03-2018 AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 Pfam PF00106 short chain dehydrogenase 3 187 3.1E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 SUPERFAMILY SSF51735 2 270 3.49E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.0E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.0E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.0E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS16600 f53b9024d7792c27449777b1695b7105 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.0E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS11765 a1f118e524e1f9003af7de48beaed65d 151 Pfam PF07681 DoxX 27 108 1.2E-17 T 29-03-2018 IPR032808 DoxX family AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SUPERFAMILY SSF55073 399 558 2.35E-46 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Gene3D G3DSA:3.30.70.270 385 557 2.2E-56 T 29-03-2018 AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Pfam PF00563 EAL domain 572 807 2.0E-75 T 29-03-2018 IPR001633 EAL domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Gene3D G3DSA:3.20.20.450 558 815 2.6E-98 T 29-03-2018 IPR001633 EAL domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 268 1.6E-6 T 29-03-2018 IPR000014 PAS domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 3.0E-24 T 29-03-2018 IPR000014 PAS domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SMART SM00086 219 261 5.3 T 29-03-2018 IPR001610 PAC motif AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SMART SM00086 341 383 7.5E-8 T 29-03-2018 IPR001610 PAC motif AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SUPERFAMILY SSF141868 572 813 3.01E-89 T 29-03-2018 IPR001633 EAL domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SUPERFAMILY SSF55785 152 262 9.95E-16 T 29-03-2018 IPR000014 PAS domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SMART SM00052 566 812 7.2E-118 T 29-03-2018 IPR001633 EAL domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SMART SM00091 146 212 17.0 T 29-03-2018 IPR000014 PAS domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SMART SM00091 269 335 1.7E-8 T 29-03-2018 IPR000014 PAS domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SMART SM00267 383 556 2.7E-62 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 554 5.9E-43 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Gene3D G3DSA:3.40.50.10600 268 384 2.5E-28 T 29-03-2018 AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 551 7.8E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Pfam PF08448 PAS fold 158 262 8.5E-10 T 29-03-2018 IPR013656 PAS fold-4 AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Gene3D G3DSA:3.30.450.20 125 267 2.0E-16 T 29-03-2018 AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 Pfam PF13426 PAS domain 280 381 9.3E-19 T 29-03-2018 IPR000014 PAS domain AL539_RS12685 bd5f77ea13353e212bf24d4e6147b6c1 815 SUPERFAMILY SSF55785 277 380 3.49E-29 T 29-03-2018 IPR000014 PAS domain AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 Gene3D G3DSA:3.40.50.20 2 129 4.9E-53 T 29-03-2018 AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.319 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 Gene3D G3DSA:3.30.470.20 191 300 1.6E-17 T 29-03-2018 AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 Gene3D G3DSA:3.30.1490.20 138 190 4.6E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 4.8E-140 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.5E-48 T 29-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 SUPERFAMILY SSF52440 2 122 1.52E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 29-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL539_RS09235 4a5470ee68668ce4e37ff25bb674100d 316 SUPERFAMILY SSF56059 123 313 3.98E-59 T 29-03-2018 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 393 412 2.4E-7 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 315 330 2.4E-7 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 188 203 2.4E-7 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 350 367 2.4E-7 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.4E-7 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 317 619 2.5E-65 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 Pfam PF01578 Cytochrome C assembly protein 89 294 9.4E-39 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05790 883a130e5caf8d7454eaf31329328fa3 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.2E-66 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.692 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 2.9E-43 T 29-03-2018 IPR001162 UvrC family homology region AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 9.7E-217 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.4E-12 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Gene3D G3DSA:3.40.1440.10 6 101 8.9E-24 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Pfam PF02151 UvrB/uvrC motif 205 238 1.2E-8 T 29-03-2018 IPR001943 UVR domain GO:0005515 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 SMART SM00465 17 98 5.7E-23 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Gene3D G3DSA:1.10.150.20 554 610 1.2E-12 T 29-03-2018 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 SUPERFAMILY SSF47781 521 609 3.81E-19 T 29-03-2018 IPR010994 RuvA domain 2-like AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 2.3E-9 T 29-03-2018 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 SUPERFAMILY SSF82771 16 100 2.48E-23 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 Gene3D G3DSA:4.10.860.10 182 241 5.3E-14 T 29-03-2018 IPR001943 UVR domain GO:0005515 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 SUPERFAMILY SSF46600 190 243 2.22E-13 T 29-03-2018 IPR001943 UVR domain GO:0005515 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 SMART SM00278 588 607 300.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS05910 b1afaeb2e1bb8ba15c703ade9e6a15bd 610 SMART SM00278 556 575 0.14 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL539_RS19880 f019916c19034af0f692b765e393589c 889 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 761 878 7.7E-26 T 29-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AL539_RS19880 f019916c19034af0f692b765e393589c 889 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 49 101 3.9E-10 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS19880 f019916c19034af0f692b765e393589c 889 Pfam PF13244 Domain of unknown function (DUF4040) 592 657 2.4E-13 T 29-03-2018 IPR025383 Domain of unknown function DUF4040 AL539_RS19880 f019916c19034af0f692b765e393589c 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 204 225 5.2E-33 T 29-03-2018 AL539_RS19880 f019916c19034af0f692b765e393589c 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 111 5.2E-33 T 29-03-2018 AL539_RS19880 f019916c19034af0f692b765e393589c 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 252 5.2E-33 T 29-03-2018 AL539_RS19880 f019916c19034af0f692b765e393589c 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 294 306 5.2E-33 T 29-03-2018 AL539_RS19880 f019916c19034af0f692b765e393589c 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 63 88 5.2E-33 T 29-03-2018 AL539_RS19880 f019916c19034af0f692b765e393589c 889 Pfam PF00361 Proton-conducting membrane transporter 114 401 2.6E-61 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 1.1E-83 T 29-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 Pfam PF17391 Urocanase N-terminal domain 17 143 1.0E-62 T 29-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 SUPERFAMILY SSF111326 11 557 9.94E-260 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 29-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.341 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 3.7E-291 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 PIRSF PIRSF001423 1 563 1.5E-294 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 Pfam PF17392 Urocanase C-terminal domain 354 548 9.0E-92 T 29-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 Gene3D G3DSA:3.40.1770.10 15 158 1.0E-29 T 29-03-2018 AL539_RS02235 beb559d604d4e772d2bfec4505bb200e 565 Gene3D G3DSA:3.40.1770.10 201 557 1.8E-160 T 29-03-2018 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 PIRSF PIRSF000813 1 406 3.0E-203 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 SUPERFAMILY SSF81891 120 401 2.49E-55 T 29-03-2018 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 Pfam PF01966 HD domain 229 326 7.7E-9 T 29-03-2018 IPR006674 HD domain AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.7E-13 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 Pfam PF01743 Poly A polymerase head domain 3 122 3.3E-20 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.213 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 SUPERFAMILY SSF81301 2 119 5.23E-31 T 29-03-2018 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 Gene3D G3DSA:3.30.460.10 1 118 7.1E-29 T 29-03-2018 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 Gene3D G3DSA:1.10.3090.10 119 406 1.3E-59 T 29-03-2018 AL539_RS14345 ea0eae7e4d58d8ee24760cdafe7912a1 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.155 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL539_RS22385 689572d2480ecee4e72d9d859a0d63ed 288 SUPERFAMILY SSF56281 7 263 2.94E-39 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS22385 689572d2480ecee4e72d9d859a0d63ed 288 Pfam PF00753 Metallo-beta-lactamase superfamily 38 223 4.9E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS22385 689572d2480ecee4e72d9d859a0d63ed 288 SMART SM00849 38 223 6.6E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS22385 689572d2480ecee4e72d9d859a0d63ed 288 Gene3D G3DSA:3.60.15.10 19 250 5.4E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS07025 4bbba57d18a0f741f18cbd0c9604dced 291 Gene3D G3DSA:3.40.190.10 175 260 7.8E-21 T 29-03-2018 AL539_RS07025 4bbba57d18a0f741f18cbd0c9604dced 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS07025 4bbba57d18a0f741f18cbd0c9604dced 291 SUPERFAMILY SSF53850 89 287 4.62E-38 T 29-03-2018 AL539_RS07025 4bbba57d18a0f741f18cbd0c9604dced 291 Pfam PF03466 LysR substrate binding domain 88 286 1.2E-40 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS07025 4bbba57d18a0f741f18cbd0c9604dced 291 Gene3D G3DSA:1.10.10.10 1 88 1.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07025 4bbba57d18a0f741f18cbd0c9604dced 291 Gene3D G3DSA:3.40.190.10 89 174 7.9E-12 T 29-03-2018 AL539_RS07025 4bbba57d18a0f741f18cbd0c9604dced 291 SUPERFAMILY SSF46785 1 84 6.01E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 3.6E-152 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 SUPERFAMILY SSF52540 5 334 2.06E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 Pfam PF00437 Type II/IV secretion system protein 12 270 2.9E-47 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 Gene3D G3DSA:3.30.450.90 1 100 8.2E-26 T 29-03-2018 AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 Gene3D G3DSA:3.40.50.300 118 272 1.5E-28 T 29-03-2018 AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 Gene3D G3DSA:3.40.50.300 273 344 7.8E-12 T 29-03-2018 AL539_RS09255 68e5feab93ce9f868c0ca9df2dcd71b1 346 SMART SM00382 122 247 0.0059 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS25955 4040740628b149224c07509addacb076 222 SMART SM00862 146 220 3.3E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS25955 4040740628b149224c07509addacb076 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.9E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS25955 4040740628b149224c07509addacb076 222 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS25955 4040740628b149224c07509addacb076 222 SMART SM00448 1 113 1.3E-43 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS25955 4040740628b149224c07509addacb076 222 SUPERFAMILY SSF52172 1 165 2.85E-38 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS25955 4040740628b149224c07509addacb076 222 Gene3D G3DSA:1.10.10.10 121 222 8.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25955 4040740628b149224c07509addacb076 222 Gene3D G3DSA:3.40.50.2300 1 120 2.5E-37 T 29-03-2018 AL539_RS05475 455bd97e9976d9f42daeb32bf8ab9f9f 185 Gene3D G3DSA:3.30.460.10 22 151 3.4E-18 T 29-03-2018 AL539_RS05475 455bd97e9976d9f42daeb32bf8ab9f9f 185 SUPERFAMILY SSF81301 28 131 1.5E-6 T 29-03-2018 AL539_RS16980 ded59ee561d9444b17ca24574053fc9a 780 SUPERFAMILY SSF82866 601 771 7.46E-21 T 29-03-2018 AL539_RS16980 ded59ee561d9444b17ca24574053fc9a 780 Gene3D G3DSA:1.20.1640.10 181 409 1.3E-19 T 29-03-2018 AL539_RS16980 ded59ee561d9444b17ca24574053fc9a 780 SUPERFAMILY SSF82866 209 408 1.31E-20 T 29-03-2018 AL539_RS16980 ded59ee561d9444b17ca24574053fc9a 780 Pfam PF03176 MMPL family 72 414 8.9E-12 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL539_RS16980 ded59ee561d9444b17ca24574053fc9a 780 Gene3D G3DSA:1.20.1640.10 598 773 5.7E-18 T 29-03-2018 AL539_RS00080 8fe832aab61e61ab5653f6c27c060707 209 Pfam PF05309 TraE protein 2 180 6.9E-24 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 AL539_RS13385 06a9d06e8745eaefad975b57d60737eb 648 SUPERFAMILY SSF51735 144 268 2.01E-16 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13385 06a9d06e8745eaefad975b57d60737eb 648 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 4.5E-128 T 29-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AL539_RS13385 06a9d06e8745eaefad975b57d60737eb 648 Pfam PF13727 CoA-binding domain 68 238 8.7E-10 T 29-03-2018 AL539_RS13385 06a9d06e8745eaefad975b57d60737eb 648 Gene3D G3DSA:3.40.50.720 276 617 5.9E-55 T 29-03-2018 AL539_RS13385 06a9d06e8745eaefad975b57d60737eb 648 SUPERFAMILY SSF51735 281 600 1.57E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13385 06a9d06e8745eaefad975b57d60737eb 648 Gene3D G3DSA:3.40.50.720 140 264 1.0E-23 T 29-03-2018 AL539_RS22260 93a4fec3ea5a7e1c02a68cb9f6ba84ac 178 Gene3D G3DSA:1.20.58.320 1 77 7.4E-26 T 29-03-2018 AL539_RS22260 93a4fec3ea5a7e1c02a68cb9f6ba84ac 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 5.0E-62 T 29-03-2018 IPR010323 Protein of unknown function DUF924 AL539_RS22260 93a4fec3ea5a7e1c02a68cb9f6ba84ac 178 SUPERFAMILY SSF48452 2 174 1.71E-67 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22260 93a4fec3ea5a7e1c02a68cb9f6ba84ac 178 Gene3D G3DSA:1.25.40.10 78 178 6.2E-36 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS14325 c928001cb5215d241ca78880112d833d 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 5.4E-49 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL539_RS14325 c928001cb5215d241ca78880112d833d 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 9.0E-73 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL539_RS14325 c928001cb5215d241ca78880112d833d 203 SMART SM01207 10 185 5.3E-82 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL539_RS14325 c928001cb5215d241ca78880112d833d 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.713 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL539_RS12360 c1fcc9ee268f4dc877594c779617b575 207 SUPERFAMILY SSF54211 5 134 9.48E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS12360 c1fcc9ee268f4dc877594c779617b575 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.2E-25 T 29-03-2018 IPR001498 Impact, N-terminal AL539_RS12360 c1fcc9ee268f4dc877594c779617b575 207 Gene3D G3DSA:3.30.230.30 8 136 3.0E-36 T 29-03-2018 IPR001498 Impact, N-terminal AL539_RS12360 c1fcc9ee268f4dc877594c779617b575 207 SUPERFAMILY SSF54980 139 204 4.03E-9 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS12360 c1fcc9ee268f4dc877594c779617b575 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.7E-11 T 29-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AL539_RS12360 c1fcc9ee268f4dc877594c779617b575 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 200 1.1E-65 T 29-03-2018 IPR015796 Impact family, bacterial/archaeal AL539_RS12360 c1fcc9ee268f4dc877594c779617b575 207 Gene3D G3DSA:3.30.70.240 138 201 1.9E-9 T 29-03-2018 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.3E-143 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 SUPERFAMILY SSF103263 4 354 2.35E-150 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.76 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 Gene3D G3DSA:3.60.150.10 3 360 3.5E-163 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 PIRSF PIRSF001456 3 360 1.2E-142 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07125 7cef66adfe28330af9dd69005b653300 361 Pfam PF01264 Chorismate synthase 10 345 2.6E-144 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL539_RS07595 008dc4409785bcc6a7283a46efdbc436 281 SUPERFAMILY SSF56235 2 253 1.45E-50 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS07595 008dc4409785bcc6a7283a46efdbc436 281 Pfam PF13230 Glutamine amidotransferases class-II 1 260 3.1E-114 T 29-03-2018 IPR026869 Putative glutamine amidotransferase type 2 AL539_RS07595 008dc4409785bcc6a7283a46efdbc436 281 Gene3D G3DSA:3.60.20.10 1 259 2.5E-46 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS05735 9f8437cb361bf34e62550a3dfaeb0f46 218 Gene3D G3DSA:3.60.15.10 3 216 5.7E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS05735 9f8437cb361bf34e62550a3dfaeb0f46 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 4.0E-29 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS05735 9f8437cb361bf34e62550a3dfaeb0f46 218 SUPERFAMILY SSF56281 5 211 2.57E-53 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS05735 9f8437cb361bf34e62550a3dfaeb0f46 218 SMART SM00849 14 195 1.4E-36 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 SUPERFAMILY SSF143437 1 173 4.01E-47 T 29-03-2018 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 Gene3D G3DSA:3.30.2300.10 84 160 1.4E-21 T 29-03-2018 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 SMART SM00981 75 165 5.7E-24 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 Gene3D G3DSA:3.40.250.10 402 481 5.1E-13 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 SUPERFAMILY SSF52821 402 481 2.1E-12 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 7.6E-114 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 Gene3D G3DSA:3.30.70.1510 2 82 1.4E-19 T 29-03-2018 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 224.283 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.2E-42 T 29-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 Pfam PF02926 THUMP domain 44 158 2.3E-23 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 Gene3D G3DSA:3.40.50.620 175 401 9.8E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-72 T 29-03-2018 IPR020536 Thil, AANH domain GO:0004810 AL539_RS15945 36cbfa9244a394a7f6cd5998b87778a5 482 SUPERFAMILY SSF52402 174 372 4.41E-42 T 29-03-2018 AL539_RS03975 ea3b5dba8503dc62c7b18bed3e3a05e0 352 Gene3D G3DSA:3.20.20.70 8 352 5.5E-122 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS03975 ea3b5dba8503dc62c7b18bed3e3a05e0 352 SUPERFAMILY SSF51569 8 349 1.2E-130 T 29-03-2018 AL539_RS03975 ea3b5dba8503dc62c7b18bed3e3a05e0 352 Pfam PF00793 DAHP synthetase I family 44 338 1.1E-98 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL539_RS03975 ea3b5dba8503dc62c7b18bed3e3a05e0 352 PIRSF PIRSF001361 1 352 3.4E-155 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL539_RS03975 ea3b5dba8503dc62c7b18bed3e3a05e0 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.2E-159 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL539_RS03050 f2bfac2deca028828a996d4a1ee9cd5f 280 SUPERFAMILY SSF53850 44 269 3.91E-15 T 29-03-2018 AL539_RS03050 f2bfac2deca028828a996d4a1ee9cd5f 280 Gene3D G3DSA:3.40.190.10 34 269 8.0E-9 T 29-03-2018 AL539_RS15965 e0a565a6f31248d14009ad4b8c326769 363 SUPERFAMILY SSF53335 186 302 1.23E-12 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS15965 e0a565a6f31248d14009ad4b8c326769 363 PIRSF PIRSF028774 1 362 4.1E-193 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AL539_RS15965 e0a565a6f31248d14009ad4b8c326769 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.8E-5 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL539_RS15965 e0a565a6f31248d14009ad4b8c326769 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.959 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AL539_RS15965 e0a565a6f31248d14009ad4b8c326769 363 Gene3D G3DSA:3.40.50.150 178 358 6.2E-19 T 29-03-2018 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 8.7E-126 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 PIRSF PIRSF000109 1 477 1.6E-240 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 8.7E-234 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 1.4E-51 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 Gene3D G3DSA:1.20.5.320 435 482 8.6E-24 T 29-03-2018 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 SUPERFAMILY SSF51735 4 174 6.79E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 29-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.9E-85 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.9E-85 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.9E-85 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.9E-85 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.9E-85 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.9E-85 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 SUPERFAMILY SSF48179 177 472 7.48E-126 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 Gene3D G3DSA:3.40.50.720 2 180 3.3E-36 T 29-03-2018 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 Gene3D G3DSA:1.10.1040.10 181 434 2.0E-105 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS04590 307876df6b48fde8d13f37569ac5bf20 482 SMART SM01350 179 469 1.8E-213 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL539_RS05960 0641307743f86b0908a2bc81d22afd89 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 2.0E-7 T 29-03-2018 IPR012639 Tryptophan operon leader peptide AL539_RS05960 0641307743f86b0908a2bc81d22afd89 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 5.3E-30 T 29-03-2018 IPR012639 Tryptophan operon leader peptide AL539_RS06830 3a9e18a6cfcd5c25026fd2c93d0e91b5 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 2.3E-99 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL539_RS06830 3a9e18a6cfcd5c25026fd2c93d0e91b5 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.58 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 Pfam PF02253 Phospholipase A1 48 308 2.4E-95 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 281 301 9.1E-30 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 226 244 9.1E-30 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 140 159 9.1E-30 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 276 9.1E-30 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 94 111 9.1E-30 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 Gene3D G3DSA:2.40.230.10 45 312 8.4E-90 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS18985 f37ac9ae938c3b2714b18398ea8870ee 312 SUPERFAMILY SSF56931 48 311 6.02E-89 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AL539_RS13945 dfccefaf78d64c8704a5c0444ef2c0da 161 Pfam PF12821 Threonine/Serine exporter, ThrE 17 151 6.4E-38 T 29-03-2018 IPR024528 Threonine/Serine exporter, ThrE AL539_RS07650 61895d22e0b9b66399b4983b0606c8d2 252 Gene3D G3DSA:3.60.15.10 1 252 2.8E-70 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS07650 61895d22e0b9b66399b4983b0606c8d2 252 PIRSF PIRSF005457 1 252 1.9E-97 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL539_RS07650 61895d22e0b9b66399b4983b0606c8d2 252 SUPERFAMILY SSF56281 2 252 5.9E-68 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS07650 61895d22e0b9b66399b4983b0606c8d2 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.234 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL539_RS07650 61895d22e0b9b66399b4983b0606c8d2 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.2E-26 T 29-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL539_RS07650 61895d22e0b9b66399b4983b0606c8d2 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 6.7E-103 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL539_RS07650 61895d22e0b9b66399b4983b0606c8d2 252 SMART SM00849 12 166 8.9E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 Gene3D G3DSA:2.40.10.10 56 145 1.0E-13 T 29-03-2018 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 Gene3D G3DSA:2.40.10.10 146 323 8.9E-25 T 29-03-2018 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 Pfam PF00089 Trypsin 45 315 3.3E-27 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 2.8E-15 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 2.8E-15 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 2.8E-15 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 29-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 SMART SM00020 25 315 2.4E-21 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 SUPERFAMILY SSF50494 48 319 1.94E-39 T 29-03-2018 IPR009003 Peptidase S1, PA clan AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 29-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL539_RS15245 005ec0a68022bcb92719b4d7816c8a17 388 Gene3D G3DSA:2.40.10.10 20 55 3.2E-8 T 29-03-2018 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 SUPERFAMILY SSF47384 234 310 6.67E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 5.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 5.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 5.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 5.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 SMART SM00388 248 310 1.8E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 Gene3D G3DSA:1.10.287.130 238 306 3.3E-12 T 29-03-2018 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 3.2E-58 T 29-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 SMART SM00304 194 247 2.6E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 461 6.3E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 309 1.5E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 Pfam PF00672 HAMP domain 195 242 7.2E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 SUPERFAMILY SSF55874 300 462 2.36E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 Gene3D G3DSA:3.30.565.10 313 464 3.3E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS10900 4db57762b5cbc477524165f37f0c37a7 464 SMART SM00387 354 464 7.6E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 SUPERFAMILY SSF47384 271 340 8.83E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 332 2.6E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 SMART SM00387 381 479 1.8E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 Gene3D G3DSA:1.10.287.130 268 327 0.002 T 29-03-2018 AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 SUPERFAMILY SSF55874 348 479 1.3E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 9.0E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 Gene3D G3DSA:3.30.565.10 328 479 1.3E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 SMART SM00388 276 343 5.0E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS18430 1935f2005dd9a4c7120669e0ecf294bd 484 Pfam PF11884 Domain of unknown function (DUF3404) 17 275 5.8E-111 T 29-03-2018 IPR021821 Protein of unknown function DUF3404 AL539_RS04970 f49da9a6bd64e08342a5d9b38c5093b7 83 Pfam PF01527 Transposase 4 64 1.4E-8 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AL539_RS04970 f49da9a6bd64e08342a5d9b38c5093b7 83 Gene3D G3DSA:1.10.10.60 1 77 6.5E-14 T 29-03-2018 AL539_RS04970 f49da9a6bd64e08342a5d9b38c5093b7 83 SUPERFAMILY SSF46689 5 80 4.48E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS02345 c712520d48ac27735c9718670d55d8c2 216 Gene3D G3DSA:3.40.50.150 17 216 2.9E-27 T 29-03-2018 AL539_RS02345 c712520d48ac27735c9718670d55d8c2 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 4.7E-79 T 29-03-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AL539_RS02345 c712520d48ac27735c9718670d55d8c2 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.897 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL539_RS02345 c712520d48ac27735c9718670d55d8c2 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 2.1E-74 T 29-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL539_RS02345 c712520d48ac27735c9718670d55d8c2 216 SUPERFAMILY SSF53335 3 214 8.77E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS02345 c712520d48ac27735c9718670d55d8c2 216 PIRSF PIRSF023956 1 216 1.8E-73 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 SMART SM00922 137 230 3.0E-16 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 SUPERFAMILY SSF51604 123 319 2.23E-52 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 Pfam PF13378 Enolase C-terminal domain-like 140 326 1.4E-27 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 109 2.4E-9 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 Gene3D G3DSA:3.30.390.10 1 127 6.0E-23 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 SUPERFAMILY SSF54826 2 110 1.79E-21 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL539_RS21190 c0bdfd4944c1df307fde9a565c41ada7 330 Gene3D G3DSA:3.20.20.120 128 330 4.6E-43 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS01940 6973f3e1692c8e67a8442ae8e2cb5a76 92 Pfam PF01386 Ribosomal L25p family 4 89 4.3E-22 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL539_RS01940 6973f3e1692c8e67a8442ae8e2cb5a76 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-38 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL539_RS01940 6973f3e1692c8e67a8442ae8e2cb5a76 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.525 T 29-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL539_RS01940 6973f3e1692c8e67a8442ae8e2cb5a76 92 Gene3D G3DSA:2.40.240.10 1 92 1.1E-27 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS01940 6973f3e1692c8e67a8442ae8e2cb5a76 92 SUPERFAMILY SSF50715 1 92 4.19E-28 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 145 153 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 Gene3D G3DSA:1.10.441.10 184 283 5.0E-30 T 29-03-2018 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 Pfam PF01238 Phosphomannose isomerase type I 23 378 5.5E-88 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 Gene3D G3DSA:2.60.120.10 25 183 1.8E-51 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PIRSF PIRSF001480 18 410 1.7E-101 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 Gene3D G3DSA:2.60.120.10 316 410 5.4E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 21 405 5.6E-89 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 24 42 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 52 67 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 295 314 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 145 168 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 241 256 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 PRINTS PR00714 Phosphomannose isomerase type I signature 100 121 5.0E-69 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 SUPERFAMILY SSF51182 19 395 2.84E-105 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS20115 a6e77794dd4218616ff5001d9cb37c0e 410 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 276 301 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 AL539_RS13565 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 63 3.1E-25 T 29-03-2018 AL539_RS13565 d5416c7f0eac08b463d8687425d13580 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-23 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13565 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.7E-25 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13565 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13565 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 29-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13565 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS20135 0236b090c816fb09971f0ce802ab113c 806 SUPERFAMILY SSF48208 307 776 5.95E-22 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20135 0236b090c816fb09971f0ce802ab113c 806 Gene3D G3DSA:2.70.98.10 41 368 2.0E-87 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL539_RS20135 0236b090c816fb09971f0ce802ab113c 806 Gene3D G3DSA:1.20.1050.60 393 486 4.0E-22 T 29-03-2018 AL539_RS20135 0236b090c816fb09971f0ce802ab113c 806 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 41 794 2.3E-149 T 29-03-2018 IPR005887 Alpha-1,2-mannosidase, putative AL539_RS20135 0236b090c816fb09971f0ce802ab113c 806 Pfam PF07971 Glycosyl hydrolase family 92 285 793 1.8E-138 T 29-03-2018 IPR012939 Glycosyl hydrolase family 92 AL539_RS20135 0236b090c816fb09971f0ce802ab113c 806 Gene3D G3DSA:3.30.2080.10 642 805 3.8E-55 T 29-03-2018 AL539_RS14520 72b11c237fcd25840854b4c40d7b4b21 603 SUPERFAMILY SSF53822 456 599 3.18E-69 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS14520 72b11c237fcd25840854b4c40d7b4b21 603 SUPERFAMILY SSF53822 260 428 3.18E-69 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS14520 72b11c237fcd25840854b4c40d7b4b21 603 Gene3D G3DSA:1.25.40.10 40 250 4.3E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS14520 72b11c237fcd25840854b4c40d7b4b21 603 Pfam PF04348 LppC putative lipoprotein 40 599 1.1E-162 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA AL539_RS14520 72b11c237fcd25840854b4c40d7b4b21 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 30.292 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA AL539_RS14520 72b11c237fcd25840854b4c40d7b4b21 603 Gene3D G3DSA:3.40.50.2300 257 442 1.1E-20 T 29-03-2018 AL539_RS14520 72b11c237fcd25840854b4c40d7b4b21 603 Gene3D G3DSA:3.40.50.2300 443 596 1.0E-9 T 29-03-2018 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 SUPERFAMILY SSF48256 14 380 6.28E-124 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 PIRSF PIRSF001369 7 380 1.4E-116 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 1.3E-160 T 29-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 Gene3D G3DSA:1.10.580.10 310 360 5.3E-8 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 Gene3D G3DSA:1.10.580.10 20 268 1.9E-76 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.2E-111 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 PRINTS PR00143 Citrate synthase signature 130 143 1.3E-35 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 PRINTS PR00143 Citrate synthase signature 256 276 1.3E-35 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 PRINTS PR00143 Citrate synthase signature 181 196 1.3E-35 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 PRINTS PR00143 Citrate synthase signature 313 329 1.3E-35 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 PRINTS PR00143 Citrate synthase signature 203 231 1.3E-35 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 PRINTS PR00143 Citrate synthase signature 333 347 1.3E-35 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS04295 7c87464ef9e30aa18eb458d223ddbbe8 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL539_RS10520 fd2545da02bf5f1dfa7209b6090a8099 263 SMART SM01150 3 262 1.8E-115 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 AL539_RS10520 fd2545da02bf5f1dfa7209b6090a8099 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 261 9.5E-46 T 29-03-2018 IPR009770 Domain of unknown function DUF1338 AL539_RS08650 8b6b1567d52d0531e4929df1354e0e71 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.4E-46 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS08650 8b6b1567d52d0531e4929df1354e0e71 161 SUPERFAMILY SSF55083 1 159 3.79E-54 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS08650 8b6b1567d52d0531e4929df1354e0e71 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS08650 8b6b1567d52d0531e4929df1354e0e71 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 6.6E-38 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS08650 8b6b1567d52d0531e4929df1354e0e71 161 Gene3D G3DSA:3.30.70.560 1 158 1.0E-57 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS23105 821fde4f88862653ee2ba6661c239467 577 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 434 2.7E-75 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS23105 821fde4f88862653ee2ba6661c239467 577 Pfam PF00474 Sodium:solute symporter family 36 432 2.4E-55 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS02415 5b02cfa89fc5fcf269908b9ffad1d2e7 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.355 T 29-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 AL539_RS02415 5b02cfa89fc5fcf269908b9ffad1d2e7 331 Pfam PF01032 FecCD transport family 25 326 4.9E-79 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS02415 5b02cfa89fc5fcf269908b9ffad1d2e7 331 SUPERFAMILY SSF81345 7 326 2.22E-77 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS02415 5b02cfa89fc5fcf269908b9ffad1d2e7 331 Gene3D G3DSA:1.10.3470.10 9 331 5.2E-56 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS26110 5bd9655460e4b1e8efa3ade71ccf3ef4 717 Gene3D G3DSA:1.10.510.10 167 716 8.4E-43 T 29-03-2018 AL539_RS26110 5bd9655460e4b1e8efa3ade71ccf3ef4 717 Gene3D G3DSA:3.30.200.20 4 166 3.3E-19 T 29-03-2018 AL539_RS26110 5bd9655460e4b1e8efa3ade71ccf3ef4 717 SMART SM00220 94 365 3.5E-34 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL539_RS26110 5bd9655460e4b1e8efa3ade71ccf3ef4 717 SUPERFAMILY SSF56112 91 339 5.4E-56 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS26110 5bd9655460e4b1e8efa3ade71ccf3ef4 717 Pfam PF00069 Protein kinase domain 94 326 3.5E-39 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL539_RS26110 5bd9655460e4b1e8efa3ade71ccf3ef4 717 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 221 233 - T 29-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL539_RS07500 c29b197b8ea5e8d2ba7b1ce2ff514052 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 1.5E-32 T 29-03-2018 IPR006504 Transcriptional regulator Spx/MgsR AL539_RS07500 c29b197b8ea5e8d2ba7b1ce2ff514052 116 Pfam PF03960 ArsC family 6 112 1.7E-19 T 29-03-2018 IPR006660 Arsenate reductase-like AL539_RS07500 c29b197b8ea5e8d2ba7b1ce2ff514052 116 SUPERFAMILY SSF52833 3 114 1.74E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS07500 c29b197b8ea5e8d2ba7b1ce2ff514052 116 Gene3D G3DSA:3.40.30.10 2 115 1.8E-39 T 29-03-2018 AL539_RS19130 b3ec753bcc1944bc18b7a12680d87864 454 SUPERFAMILY SSF56219 253 450 1.27E-13 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS19130 b3ec753bcc1944bc18b7a12680d87864 454 SUPERFAMILY SSF56219 32 48 1.27E-13 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS19130 b3ec753bcc1944bc18b7a12680d87864 454 SUPERFAMILY SSF56219 171 215 1.27E-13 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS19130 b3ec753bcc1944bc18b7a12680d87864 454 SUPERFAMILY SSF56219 81 132 1.27E-13 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS19130 b3ec753bcc1944bc18b7a12680d87864 454 Gene3D G3DSA:3.60.10.10 28 454 5.4E-16 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS19130 b3ec753bcc1944bc18b7a12680d87864 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 445 1.9E-27 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS12040 c68a75d888aacc8516c1c8e3d5845835 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 214 3.3E-69 T 29-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AL539_RS12040 c68a75d888aacc8516c1c8e3d5845835 218 Pfam PF03006 Haemolysin-III related 11 208 1.5E-38 T 29-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 Pfam PF12833 Helix-turn-helix domain 221 300 7.5E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 SUPERFAMILY SSF46689 251 301 6.27E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 SUPERFAMILY SSF46689 198 249 6.0E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 SMART SM00342 215 298 1.0E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 SUPERFAMILY SSF52317 1 178 3.27E-27 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 Gene3D G3DSA:3.40.50.880 1 207 5.0E-28 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 Gene3D G3DSA:1.10.10.60 249 302 5.8E-12 T 29-03-2018 AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 Pfam PF01965 DJ-1/PfpI family 57 159 3.7E-10 T 29-03-2018 IPR002818 DJ-1/PfpI AL539_RS04155 830cac6d20a5bc23edc90038a72228d6 303 Gene3D G3DSA:1.10.10.60 208 248 4.9E-13 T 29-03-2018 AL539_RS03160 5f2006ffaf97d09c0230b8f9b4ded89b 374 SUPERFAMILY SSF55781 13 138 3.27E-6 T 29-03-2018 IPR029016 GAF domain-like AL539_RS03160 5f2006ffaf97d09c0230b8f9b4ded89b 374 Gene3D G3DSA:3.30.450.40 10 163 3.6E-5 T 29-03-2018 IPR029016 GAF domain-like AL539_RS03160 5f2006ffaf97d09c0230b8f9b4ded89b 374 Pfam PF13487 HD domain 274 304 8.4E-9 T 29-03-2018 AL539_RS03160 5f2006ffaf97d09c0230b8f9b4ded89b 374 SUPERFAMILY SSF109604 171 352 3.49E-12 T 29-03-2018 AL539_RS03160 5f2006ffaf97d09c0230b8f9b4ded89b 374 Gene3D G3DSA:1.10.3210.10 164 371 7.6E-18 T 29-03-2018 AL539_RS16690 7b21ff84a6648608b59e5d17466eaf1d 529 SUPERFAMILY SSF51735 387 517 1.01E-13 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16690 7b21ff84a6648608b59e5d17466eaf1d 529 Gene3D G3DSA:3.40.50.720 379 529 3.5E-15 T 29-03-2018 AL539_RS16690 7b21ff84a6648608b59e5d17466eaf1d 529 Pfam PF02254 TrkA-N domain 388 504 1.1E-17 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS16690 7b21ff84a6648608b59e5d17466eaf1d 529 Gene3D G3DSA:1.20.91.10 210 287 2.8E-4 T 29-03-2018 AL539_RS16690 7b21ff84a6648608b59e5d17466eaf1d 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 1.4E-39 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 456 3.0E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 1.1E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 Gene3D G3DSA:3.30.565.10 297 457 1.3E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 SMART SM00388 234 298 4.1E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 Gene3D G3DSA:1.10.287.130 224 294 3.7E-12 T 29-03-2018 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 SMART SM00304 178 233 9.5E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 SMART SM00387 343 457 8.0E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 2.1E-29 T 29-03-2018 IPR031930 2-component histidine kinase, sensor domain AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 Pfam PF00672 HAMP domain 178 229 1.7E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.1E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.1E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.1E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 SUPERFAMILY SSF158472 178 230 2.35E-6 T 29-03-2018 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 SUPERFAMILY SSF47384 217 298 1.69E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS22040 cfb3f6b8b1c5fe9efad8465a4d64d0f2 457 SUPERFAMILY SSF55874 287 456 8.25E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS16390 631801eef90aabd9226a91026144ddee 197 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 191 4.1E-31 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL539_RS16390 631801eef90aabd9226a91026144ddee 197 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 194 24.323 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL539_RS24070 2ef9b59d69003a8de6459c71d0dc1811 483 Pfam PF07603 Protein of unknown function (DUF1566) 291 424 2.0E-11 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 Gene3D G3DSA:1.10.10.10 1 157 1.4E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 SMART SM00347 42 143 1.5E-20 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 2.0E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 2.0E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 2.0E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 2.0E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 ProSitePatterns PS01117 MarR-type HTH domain signature. 82 116 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 SUPERFAMILY SSF46785 9 155 2.51E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10545 8719ae844ff41224f78846b2128436fb 159 Pfam PF01047 MarR family 50 107 9.6E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PIRSF PIRSF019574 1 343 3.7E-109 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 Gene3D G3DSA:3.40.190.10 19 190 1.3E-31 T 29-03-2018 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 Gene3D G3DSA:3.40.190.10 191 313 1.3E-17 T 29-03-2018 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 1.9E-36 T 29-03-2018 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03725 4e10f6178df66e4af2a84881cceefe1c 343 SUPERFAMILY SSF53850 26 332 3.22E-84 T 29-03-2018 AL539_RS14060 9c2c17be005f2c21251d0312ffa126e4 228 SUPERFAMILY SSF46785 4 78 1.68E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14060 9c2c17be005f2c21251d0312ffa126e4 228 SMART SM00345 12 70 1.9E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS14060 9c2c17be005f2c21251d0312ffa126e4 228 SUPERFAMILY SSF48008 76 216 1.99E-5 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS14060 9c2c17be005f2c21251d0312ffa126e4 228 Gene3D G3DSA:1.20.120.530 67 224 1.8E-9 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS14060 9c2c17be005f2c21251d0312ffa126e4 228 Gene3D G3DSA:1.10.10.10 3 66 8.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14060 9c2c17be005f2c21251d0312ffa126e4 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 7.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS24935 5550518a4ec530516ffc69cc2e0be1cf 454 Pfam PF07670 Nucleoside recognition 140 234 9.8E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.7E-66 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 Gene3D G3DSA:1.10.520.20 2 106 2.4E-32 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 7.6E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 7.6E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 7.6E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 7.6E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 7.6E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.253 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 6.1E-54 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 29-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12160 696dbf42f2a01152756f2aea964f547a 177 SUPERFAMILY SSF47928 3 105 1.83E-28 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL539_RS12365 34b069b623c63771ba5ffdfc220bf66c 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 3.8E-116 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL539_RS12365 34b069b623c63771ba5ffdfc220bf66c 485 PIRSF PIRSF006247 1 485 7.6E-176 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL539_RS12365 34b069b623c63771ba5ffdfc220bf66c 485 Pfam PF02386 Cation transport protein 39 477 1.9E-87 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL539_RS12365 34b069b623c63771ba5ffdfc220bf66c 485 Gene3D G3DSA:1.10.287.70 276 482 0.026 T 29-03-2018 AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 SMART SM00244 19 176 9.2E-65 T 29-03-2018 IPR001107 Band 7 domain AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 SUPERFAMILY SSF117892 50 183 2.62E-43 T 29-03-2018 IPR001107 Band 7 domain AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 Pfam PF01145 SPFH domain / Band 7 family 24 192 2.8E-35 T 29-03-2018 IPR001107 Band 7 domain AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 152 170 1.8E-63 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 73 94 1.8E-63 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 108 125 1.8E-63 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 128 151 1.8E-63 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 26 48 1.8E-63 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 171 192 1.8E-63 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS19560 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 196 219 1.8E-63 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AL539_RS07450 469e1e54666c81af3bd622c573c47414 144 Pfam PF03646 FlaG protein 44 142 3.9E-24 T 29-03-2018 IPR005186 FlaG protein AL539_RS07450 469e1e54666c81af3bd622c573c47414 144 SUPERFAMILY SSF160214 62 140 7.85E-22 T 29-03-2018 IPR005186 FlaG protein AL539_RS07450 469e1e54666c81af3bd622c573c47414 144 Gene3D G3DSA:3.30.160.170 35 137 5.9E-22 T 29-03-2018 IPR005186 FlaG protein AL539_RS13830 fc2b2e59ab9a569747aaae45930d537c 176 Gene3D G3DSA:3.90.80.10 2 176 2.0E-50 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL539_RS13830 fc2b2e59ab9a569747aaae45930d537c 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.545 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL539_RS13830 fc2b2e59ab9a569747aaae45930d537c 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.5E-51 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL539_RS13830 fc2b2e59ab9a569747aaae45930d537c 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL539_RS13830 fc2b2e59ab9a569747aaae45930d537c 176 SUPERFAMILY SSF50324 3 174 4.58E-64 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL539_RS16020 fdfb7dac3c66ecaaa051b58958adf3ba 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.6E-81 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL539_RS16020 fdfb7dac3c66ecaaa051b58958adf3ba 183 Pfam PF13242 HAD-hyrolase-like 107 176 5.8E-13 T 29-03-2018 AL539_RS16020 fdfb7dac3c66ecaaa051b58958adf3ba 183 PIRSF PIRSF004682 1 183 4.9E-64 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL539_RS16020 fdfb7dac3c66ecaaa051b58958adf3ba 183 Gene3D G3DSA:3.40.50.1000 2 183 6.4E-32 T 29-03-2018 IPR023214 HAD-like domain AL539_RS16020 fdfb7dac3c66ecaaa051b58958adf3ba 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-38 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL539_RS16020 fdfb7dac3c66ecaaa051b58958adf3ba 183 SUPERFAMILY SSF56784 4 181 2.07E-49 T 29-03-2018 IPR023214 HAD-like domain AL539_RS16020 fdfb7dac3c66ecaaa051b58958adf3ba 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 4.1E-36 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL539_RS02040 d9c78d8d5141497cdabb1f93084717cb 414 Gene3D G3DSA:3.40.50.1970 1 180 2.4E-38 T 29-03-2018 AL539_RS02040 d9c78d8d5141497cdabb1f93084717cb 414 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 5.7E-90 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL539_RS02040 d9c78d8d5141497cdabb1f93084717cb 414 SUPERFAMILY SSF56796 1 380 9.16E-88 T 29-03-2018 AL539_RS02040 d9c78d8d5141497cdabb1f93084717cb 414 Gene3D G3DSA:1.20.1090.10 183 389 2.8E-38 T 29-03-2018 AL539_RS03140 88b5d77fb6327f0a26f34ce3429951ef 200 SMART SM00702 11 187 3.9E-35 T 29-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AL539_RS03140 88b5d77fb6327f0a26f34ce3429951ef 200 Gene3D G3DSA:2.60.120.620 1 193 1.9E-35 T 29-03-2018 AL539_RS03140 88b5d77fb6327f0a26f34ce3429951ef 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 3.3E-21 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL539_RS19180 d508cab215b53f9e93cb1e86570fe333 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 307 453 1.1E-33 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19180 d508cab215b53f9e93cb1e86570fe333 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 306 453 2.2E-34 T 29-03-2018 IPR000160 GGDEF domain AL539_RS19180 d508cab215b53f9e93cb1e86570fe333 456 Gene3D G3DSA:3.30.70.270 297 456 5.3E-38 T 29-03-2018 AL539_RS19180 d508cab215b53f9e93cb1e86570fe333 456 SUPERFAMILY SSF55073 310 452 1.02E-32 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS19180 d508cab215b53f9e93cb1e86570fe333 456 SMART SM00267 295 454 1.3E-33 T 29-03-2018 IPR000160 GGDEF domain AL539_RS12770 12a6156e0d5d7f87936a57572940bf17 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.1E-20 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS12770 12a6156e0d5d7f87936a57572940bf17 219 SUPERFAMILY SSF52540 16 205 6.37E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12770 12a6156e0d5d7f87936a57572940bf17 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.588 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL539_RS12770 12a6156e0d5d7f87936a57572940bf17 219 Gene3D G3DSA:3.40.50.300 3 207 4.9E-27 T 29-03-2018 AL539_RS12770 12a6156e0d5d7f87936a57572940bf17 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.7E-74 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL539_RS23590 4ad2022a58838cb273fc00aa61a7c835 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 6.4E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS23590 4ad2022a58838cb273fc00aa61a7c835 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 6.4E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS23590 4ad2022a58838cb273fc00aa61a7c835 181 SUPERFAMILY SSF46689 2 71 7.48E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS23590 4ad2022a58838cb273fc00aa61a7c835 181 Gene3D G3DSA:1.10.10.60 2 51 2.6E-11 T 29-03-2018 AL539_RS23590 4ad2022a58838cb273fc00aa61a7c835 181 Gene3D G3DSA:1.10.357.10 52 172 1.6E-18 T 29-03-2018 AL539_RS23590 4ad2022a58838cb273fc00aa61a7c835 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 1.3E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS23590 4ad2022a58838cb273fc00aa61a7c835 181 SUPERFAMILY SSF48498 91 165 2.22E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SUPERFAMILY SSF58104 318 627 3.14E-76 T 29-03-2018 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Gene3D G3DSA:3.30.450.20 155 268 7.8E-23 T 29-03-2018 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Gene3D G3DSA:1.10.287.950 406 627 2.0E-50 T 29-03-2018 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Gene3D G3DSA:1.10.287.950 326 405 3.2E-8 T 29-03-2018 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SMART SM00304 353 403 5.3 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SMART SM00304 296 350 3.2E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Gene3D G3DSA:3.30.450.20 60 154 8.0E-27 T 29-03-2018 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Pfam PF02743 Cache domain 40 258 3.2E-32 T 29-03-2018 IPR033479 Double Cache domain 1 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SMART SM00283 365 626 4.4E-64 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 593 9.6E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Pfam PF00672 HAMP domain 300 346 2.4E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS05685 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SUPERFAMILY SSF103190 86 174 1.52E-11 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 SUPERFAMILY SSF47413 1 60 1.31E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.0E-43 T 29-03-2018 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 SMART SM00354 1 72 6.3E-34 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 SUPERFAMILY SSF53822 61 332 5.8E-95 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.1E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 Gene3D G3DSA:3.40.50.2300 56 176 1.4E-32 T 29-03-2018 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 Gene3D G3DSA:3.40.50.2300 177 335 4.7E-46 T 29-03-2018 AL539_RS19450 abba66faa26f4a274a3fcea27c827f23 335 Gene3D G3DSA:1.10.260.40 2 55 3.4E-20 T 29-03-2018 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 SUPERFAMILY SSF64518 1 376 5.62E-96 T 29-03-2018 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 8.3E-26 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.1E-11 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.3E-42 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 Gene3D G3DSA:1.20.1330.10 40 349 1.4E-69 T 29-03-2018 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16520 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS06900 d5082c787675277289207f4c0707ee62 273 Gene3D G3DSA:1.25.20.10 56 260 3.8E-6 T 29-03-2018 AL539_RS06900 d5082c787675277289207f4c0707ee62 273 SUPERFAMILY SSF81901 144 224 5.75E-5 T 29-03-2018 AL539_RS06900 d5082c787675277289207f4c0707ee62 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 7.1E-75 T 29-03-2018 IPR021372 Protein of unknown function DUF2989 AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 Pfam PF00271 Helicase conserved C-terminal domain 232 338 9.3E-27 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 SUPERFAMILY SSF52540 74 359 5.09E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.1E-47 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 Gene3D G3DSA:3.40.50.300 8 220 1.2E-56 T 29-03-2018 AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 Gene3D G3DSA:3.40.50.300 221 372 7.7E-42 T 29-03-2018 AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 SMART SM00490 257 338 3.1E-30 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL539_RS17060 f8557fe0ad24c0a8fcb4b19fb31bafae 402 SMART SM00487 20 221 1.1E-59 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS22205 3ade27c2ea9dd68ebd185a53a4aefbbe 175 Gene3D G3DSA:3.40.630.30 1 174 5.0E-30 T 29-03-2018 AL539_RS22205 3ade27c2ea9dd68ebd185a53a4aefbbe 175 SUPERFAMILY SSF55729 1 155 1.28E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS22205 3ade27c2ea9dd68ebd185a53a4aefbbe 175 Pfam PF00583 Acetyltransferase (GNAT) family 40 139 2.4E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS17005 5f9d24d9c0016e173eb81a6047a0f373 122 PIRSF PIRSF030962 1 122 2.7E-49 T 29-03-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS17005 5f9d24d9c0016e173eb81a6047a0f373 122 SUPERFAMILY SSF54637 12 108 6.53E-16 T 29-03-2018 IPR029069 HotDog domain AL539_RS17005 5f9d24d9c0016e173eb81a6047a0f373 122 Gene3D G3DSA:3.10.129.10 7 122 8.0E-17 T 29-03-2018 AL539_RS19975 45047c81c63549278171511951d2631a 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 9.6E-202 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AL539_RS19975 45047c81c63549278171511951d2631a 582 Pfam PF05947 Type VI secretion system, TssF 5 580 1.1E-186 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AL539_RS19975 45047c81c63549278171511951d2631a 582 PIRSF PIRSF028304 2 582 7.9E-207 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AL539_RS02465 acdbddf349339f8faaf3da527e713243 531 Pfam PF03572 Peptidase family S41 263 410 1.0E-22 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL539_RS02465 acdbddf349339f8faaf3da527e713243 531 SUPERFAMILY SSF52096 142 172 1.28E-31 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS02465 acdbddf349339f8faaf3da527e713243 531 SUPERFAMILY SSF52096 257 461 1.28E-31 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS02465 acdbddf349339f8faaf3da527e713243 531 Gene3D G3DSA:3.90.226.10 240 459 1.4E-30 T 29-03-2018 AL539_RS02465 acdbddf349339f8faaf3da527e713243 531 Gene3D G3DSA:2.30.42.10 143 239 1.7E-6 T 29-03-2018 AL539_RS02465 acdbddf349339f8faaf3da527e713243 531 SMART SM00245 234 452 7.2E-4 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL539_RS02465 acdbddf349339f8faaf3da527e713243 531 SUPERFAMILY SSF50156 149 214 2.13E-7 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS02485 d406928337782ee71d1fef9cdd023fdb 333 Gene3D G3DSA:3.10.310.10 151 308 8.3E-57 T 29-03-2018 AL539_RS02485 d406928337782ee71d1fef9cdd023fdb 333 PIRSF PIRSF029792 1 333 1.2E-138 T 29-03-2018 IPR008794 Proline racemase family AL539_RS02485 d406928337782ee71d1fef9cdd023fdb 333 Pfam PF05544 Proline racemase 8 330 3.5E-129 T 29-03-2018 IPR008794 Proline racemase family AL539_RS02485 d406928337782ee71d1fef9cdd023fdb 333 Gene3D G3DSA:3.10.310.10 1 150 4.8E-34 T 29-03-2018 AL539_RS02485 d406928337782ee71d1fef9cdd023fdb 333 SUPERFAMILY SSF54506 3 330 2.47E-118 T 29-03-2018 AL539_RS04055 6f58a0a91bc2378d029a5676389958da 213 Gene3D G3DSA:3.30.1330.60 28 208 2.5E-31 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS04055 6f58a0a91bc2378d029a5676389958da 213 SUPERFAMILY SSF103088 86 193 3.14E-30 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS04055 6f58a0a91bc2378d029a5676389958da 213 Pfam PF00691 OmpA family 92 187 3.9E-18 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS04055 6f58a0a91bc2378d029a5676389958da 213 PRINTS PR01021 OMPA domain signature 93 115 1.7E-6 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS04055 6f58a0a91bc2378d029a5676389958da 213 PRINTS PR01021 OMPA domain signature 138 154 1.7E-6 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS04055 6f58a0a91bc2378d029a5676389958da 213 PRINTS PR01021 OMPA domain signature 123 138 1.7E-6 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS04055 6f58a0a91bc2378d029a5676389958da 213 SUPERFAMILY SSF103647 24 81 6.93E-9 T 29-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL539_RS17820 88d948a1f79aa1bdaf830e37ca24db62 355 Gene3D G3DSA:3.30.1150.10 274 349 8.0E-15 T 29-03-2018 AL539_RS17820 88d948a1f79aa1bdaf830e37ca24db62 355 TIGRFAM TIGR02794 tolA_full: protein TolA 13 353 1.0E-86 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AL539_RS17820 88d948a1f79aa1bdaf830e37ca24db62 355 Pfam PF06519 TolA C-terminal 254 352 5.1E-30 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AL539_RS17820 88d948a1f79aa1bdaf830e37ca24db62 355 SUPERFAMILY SSF74653 264 354 4.71E-13 T 29-03-2018 AL539_RS08280 8a276579576ee36d91ecb6ccc7e2de1b 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 1.9E-38 T 29-03-2018 IPR019305 Uncharacterised protein family Smp AL539_RS11895 6b8428e6a451f2c18be6fd5b36fba8d7 411 Pfam PF13356 Arm DNA-binding domain 9 100 1.1E-14 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AL539_RS11895 6b8428e6a451f2c18be6fd5b36fba8d7 411 Gene3D G3DSA:1.10.443.10 211 396 1.3E-37 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS11895 6b8428e6a451f2c18be6fd5b36fba8d7 411 Pfam PF00589 Phage integrase family 218 377 1.5E-27 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS11895 6b8428e6a451f2c18be6fd5b36fba8d7 411 SUPERFAMILY SSF56349 109 383 5.89E-46 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 SUPERFAMILY SSF52922 492 619 2.22E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 Gene3D G3DSA:3.40.50.920 495 621 2.9E-37 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 SMART SM00861 319 483 1.7E-63 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 3.5E-28 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 4.0E-37 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.852 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 Gene3D G3DSA:3.40.50.970 2 297 2.4E-74 T 29-03-2018 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 SUPERFAMILY SSF52518 317 504 5.89E-58 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 8.6E-302 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 SUPERFAMILY SSF52518 243 381 1.75E-75 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 SUPERFAMILY SSF52518 9 199 1.75E-75 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 4.2E-118 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 Gene3D G3DSA:3.40.50.970 298 490 8.8E-64 T 29-03-2018 AL539_RS15920 7968bb5c7f27f2e66dcf5cbde31ea057 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL539_RS06435 5e335a494adc1d7b19461b3575daaa98 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.119 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS06435 5e335a494adc1d7b19461b3575daaa98 316 Gene3D G3DSA:3.40.47.10 4 161 1.4E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS06435 5e335a494adc1d7b19461b3575daaa98 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.0E-34 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS06435 5e335a494adc1d7b19461b3575daaa98 316 SUPERFAMILY SSF53901 3 315 4.22E-72 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS06435 5e335a494adc1d7b19461b3575daaa98 316 Gene3D G3DSA:3.40.47.10 162 316 9.9E-40 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS06435 5e335a494adc1d7b19461b3575daaa98 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 5.1E-146 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS06435 5e335a494adc1d7b19461b3575daaa98 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.7E-32 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS14920 730fa7c8affae0e06523a623a7753368 296 SUPERFAMILY SSF53850 90 288 1.12E-24 T 29-03-2018 AL539_RS14920 730fa7c8affae0e06523a623a7753368 296 Gene3D G3DSA:1.10.10.10 1 85 1.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14920 730fa7c8affae0e06523a623a7753368 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.6E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS14920 730fa7c8affae0e06523a623a7753368 296 SUPERFAMILY SSF46785 2 85 1.03E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14920 730fa7c8affae0e06523a623a7753368 296 Gene3D G3DSA:3.40.190.10 89 228 3.0E-4 T 29-03-2018 AL539_RS14920 730fa7c8affae0e06523a623a7753368 296 Pfam PF03466 LysR substrate binding domain 96 288 4.3E-13 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 SUPERFAMILY SSF53067 5 256 9.26E-94 T 29-03-2018 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 1.7E-86 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 Gene3D G3DSA:3.30.420.40 250 505 8.1E-80 T 29-03-2018 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 Gene3D G3DSA:3.30.420.40 1 249 6.1E-86 T 29-03-2018 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 SUPERFAMILY SSF53067 255 497 2.59E-85 T 29-03-2018 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 8.7E-61 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.151 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 PIRSF PIRSF000538 4 503 1.8E-176 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL539_RS08165 f2c32980d3c048a59c2778b1da40010a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 3.1E-226 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 33 859 7.0E-291 T 29-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 Gene3D G3DSA:3.30.499.10 4 231 5.4E-59 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 Gene3D G3DSA:3.30.499.10 363 551 2.1E-55 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 Gene3D G3DSA:3.40.1060.10 232 362 1.5E-40 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 29-03-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 Pfam PF00694 Aconitase C-terminal domain 660 791 2.3E-30 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 SUPERFAMILY SSF52016 602 860 1.9E-67 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 209 224 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 271 284 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 468 481 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 142 155 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 166 174 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 195 208 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 285 298 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 406 417 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 PRINTS PR00415 Aconitase family signature 364 378 1.6E-26 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 SUPERFAMILY SSF53732 17 598 1.7E-189 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 Gene3D G3DSA:3.20.19.10 623 862 6.5E-67 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS04290 e1cb5b9a5ed22bada291b0b60a4f8299 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 1.4E-146 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 Pfam PF00664 ABC transporter transmembrane region 24 292 2.2E-43 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.9E-179 T 29-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 SUPERFAMILY SSF90123 5 333 5.23E-59 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 Gene3D G3DSA:3.40.50.300 335 588 4.0E-54 T 29-03-2018 AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 SUPERFAMILY SSF52540 349 581 4.8E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 SMART SM00382 375 594 6.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 Pfam PF00005 ABC transporter 369 512 2.8E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS02120 384507935b51af38a32862c3a8fd4aa1 595 Gene3D G3DSA:1.20.1560.10 2 334 6.4E-47 T 29-03-2018 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 SUPERFAMILY SSF160544 244 351 9.55E-36 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.8E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.8E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.8E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.8E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.8E-37 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.1E-118 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 4.0E-118 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AL539_RS23680 6a7550ddf4fbcb5e82c40bd598ac101a 375 Gene3D G3DSA:3.40.1690.10 218 352 7.6E-51 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_RS04480 2242d40456a8469ebf6f8d0b903a296c 387 Pfam PF02661 Fic/DOC family 278 362 2.6E-5 T 29-03-2018 IPR003812 Fido domain AL539_RS04480 2242d40456a8469ebf6f8d0b903a296c 387 Gene3D G3DSA:1.10.3290.10 250 385 2.9E-7 T 29-03-2018 IPR003812 Fido domain AL539_RS04480 2242d40456a8469ebf6f8d0b903a296c 387 SUPERFAMILY SSF140931 263 370 8.76E-7 T 29-03-2018 IPR003812 Fido domain AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 Gene3D G3DSA:1.10.260.40 58 99 2.8E-16 T 29-03-2018 AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 ProSitePatterns PS00356 LacI-type HTH domain signature. 46 64 - T 29-03-2018 AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 SUPERFAMILY SSF53822 101 355 6.85E-55 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 Gene3D G3DSA:1.10.10.60 36 57 0.0019 T 29-03-2018 AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 SUPERFAMILY SSF47413 43 101 1.69E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 Gene3D G3DSA:3.40.50.2300 210 369 7.0E-40 T 29-03-2018 AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 SMART SM00354 43 113 1.0E-25 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 102 350 6.7E-29 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 Gene3D G3DSA:3.40.50.2300 100 209 3.4E-23 T 29-03-2018 AL539_RS12515 7ac3a919dc5409535925b3eb7e7c8488 369 Pfam PF00356 Bacterial regulatory proteins, lacI family 45 90 3.6E-17 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS06390 1f64e2296e15cb179216f5e26a966fdd 255 PIRSF PIRSF005902 1 255 2.1E-82 T 29-03-2018 IPR001130 TatD family GO:0016788 AL539_RS06390 1f64e2296e15cb179216f5e26a966fdd 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL539_RS06390 1f64e2296e15cb179216f5e26a966fdd 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL539_RS06390 1f64e2296e15cb179216f5e26a966fdd 255 SUPERFAMILY SSF51556 1 253 2.53E-88 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS06390 1f64e2296e15cb179216f5e26a966fdd 255 Pfam PF01026 TatD related DNase 3 253 3.2E-78 T 29-03-2018 IPR001130 TatD family GO:0016788 AL539_RS06390 1f64e2296e15cb179216f5e26a966fdd 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 4.1E-94 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL539_RS06390 1f64e2296e15cb179216f5e26a966fdd 255 Gene3D G3DSA:3.20.20.140 1 254 5.8E-79 T 29-03-2018 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 PIRSF PIRSF000149 1 331 5.1E-115 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 Gene3D G3DSA:3.30.360.10 162 315 4.3E-60 T 29-03-2018 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 SUPERFAMILY SSF51735 1 173 1.02E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 9.3E-120 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.9E-60 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 Gene3D G3DSA:3.40.50.720 1 161 6.1E-61 T 29-03-2018 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 1.1E-30 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 SUPERFAMILY SSF55347 152 314 4.17E-64 T 29-03-2018 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 SMART SM00846 3 152 2.7E-69 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 7.1E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 7.1E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.1E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 7.1E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS11515 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 7.1E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS12635 a732e4cc119d9d19ac5fe048177ec73e 58 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 6.6E-12 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AL539_RS12635 a732e4cc119d9d19ac5fe048177ec73e 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 17.124 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AL539_RS12635 a732e4cc119d9d19ac5fe048177ec73e 58 PIRSF PIRSF036466 1 55 6.5E-20 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 7.0E-167 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.467 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 Pfam PF00815 Histidinol dehydrogenase 27 424 7.7E-172 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PIRSF PIRSF000099 1 427 5.4E-171 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 SUPERFAMILY SSF53720 4 424 4.71E-93 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 Gene3D G3DSA:3.40.50.1980 26 222 6.1E-89 T 29-03-2018 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 Gene3D G3DSA:3.40.50.1980 223 368 1.7E-68 T 29-03-2018 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS01625 2185925c3d7d6dda3a79027a6747dfb7 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 3.9E-103 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL539_RS00740 f4aaa32915675b9633a76ba88c825ad0 197 SUPERFAMILY SSF56349 10 194 7.95E-37 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS00740 f4aaa32915675b9633a76ba88c825ad0 197 Gene3D G3DSA:1.10.443.10 12 193 2.4E-25 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00740 f4aaa32915675b9633a76ba88c825ad0 197 Pfam PF00589 Phage integrase family 30 182 5.4E-18 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS13090 a5582fa7708e537331a9c8dd31f9c8da 608 Gene3D G3DSA:3.90.76.10 74 169 9.6E-21 T 29-03-2018 AL539_RS13090 a5582fa7708e537331a9c8dd31f9c8da 608 SUPERFAMILY SSF53850 41 561 1.05E-97 T 29-03-2018 AL539_RS13090 a5582fa7708e537331a9c8dd31f9c8da 608 Gene3D G3DSA:3.40.190.10 170 333 5.3E-16 T 29-03-2018 AL539_RS13090 a5582fa7708e537331a9c8dd31f9c8da 608 PIRSF PIRSF002741 1 563 1.8E-70 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS13090 a5582fa7708e537331a9c8dd31f9c8da 608 Gene3D G3DSA:3.10.105.10 334 539 8.1E-36 T 29-03-2018 AL539_RS13090 a5582fa7708e537331a9c8dd31f9c8da 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 1.3E-59 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 5906 6037 0.17 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 5160 5302 0.029 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 5775 5905 0.014 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1526 1664 5.0E-54 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3118 3259 1.3E-40 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2527 2667 5.5E-56 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1669 1809 4.9E-55 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2098 2237 1.0E-53 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2969 3116 1.5E-46 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 954 1094 1.7E-57 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1240 1380 1.1E-53 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2384 2524 3.9E-54 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2816 2962 4.7E-43 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1812 1952 1.7E-57 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1383 1521 2.7E-54 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2670 2811 7.0E-54 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1097 1237 8.8E-56 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 668 807 1.6E-51 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2241 2379 5.0E-55 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1955 2089 6.0E-55 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 811 951 6.5E-53 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3420 3565 6.7E-43 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3267 3413 9.3E-46 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 507 666 1.6E-27 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3570 3703 6.3E-48 T 29-03-2018 IPR019959 T1SS-143 repeat-containing domain AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 2509 2643 0.046 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 2088 2214 0.033 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 1372 1503 0.046 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 1224 1356 0.12 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6071 6089 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.500.10 3985 4111 0.22 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1867 1939 0.0014 T 29-03-2018 IPR010221 VCBS repeat AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1009 1081 6.6E-4 T 29-03-2018 IPR010221 VCBS repeat AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 5308 5450 1.7E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19375 379534902a3658447b27585af23e2ead 6205 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6080 6098 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL539_RS19375 379534902a3658447b27585af23e2ead 6205 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 6113 6202 2.5E-13 T 29-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL539_RS19375 379534902a3658447b27585af23e2ead 6205 PRINTS PR00313 NodO calcium binding signature 6084 6092 1.5E-5 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 PRINTS PR00313 NodO calcium binding signature 6093 6102 1.5E-5 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 PRINTS PR00313 NodO calcium binding signature 6075 6083 1.5E-5 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 PRINTS PR00313 NodO calcium binding signature 6063 6074 1.5E-5 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 SUPERFAMILY SSF51120 5988 6140 4.06E-17 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 5569 5677 2.9E-13 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 5468 5568 2.6E-14 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 2661 2797 0.077 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 2373 2508 0.0097 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 1811 1939 0.0062 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 1088 1223 0.023 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 667 787 0.013 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 954 1081 0.0093 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 1513 1655 0.013 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 3588 3697 0.012 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 1954 2082 0.017 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 3144 3245 0.0077 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 5678 5774 4.0E-13 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 3724 3836 2.5E-4 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.120.640 788 937 0.23 T 29-03-2018 AL539_RS19375 379534902a3658447b27585af23e2ead 6205 Gene3D G3DSA:2.60.40.10 2233 2351 0.011 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 452 3.3E-59 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Pfam PF13361 UvrD-like helicase C-terminal domain 459 842 2.9E-17 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 25 1209 0.0 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 SUPERFAMILY SSF52540 341 793 8.48E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 SUPERFAMILY SSF52540 136 220 8.48E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 SUPERFAMILY SSF52540 823 870 8.48E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 SUPERFAMILY SSF52540 31 98 8.48E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Pfam PF12705 PD-(D/E)XK nuclease superfamily 985 1211 4.1E-7 T 29-03-2018 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Gene3D G3DSA:3.40.50.300 460 607 3.4E-14 T 29-03-2018 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Gene3D G3DSA:3.40.50.300 608 915 7.8E-29 T 29-03-2018 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 SUPERFAMILY SSF52980 928 1211 2.09E-87 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 23 1210 22.913 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Gene3D G3DSA:3.40.50.300 19 180 2.1E-6 T 29-03-2018 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Gene3D G3DSA:1.10.3170.10 181 365 1.4E-54 T 29-03-2018 AL539_RS08100 dbe1257ccd03e1bed8a9ca93c23b8ac9 1227 Gene3D G3DSA:3.90.320.10 918 1217 1.3E-81 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AL539_RS21055 01ec89deed88e504322765e835972dd9 802 Gene3D G3DSA:2.60.120.260 1 191 2.3E-34 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS21055 01ec89deed88e504322765e835972dd9 802 SUPERFAMILY SSF49303 733 801 2.73E-7 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL539_RS21055 01ec89deed88e504322765e835972dd9 802 Gene3D G3DSA:3.20.20.80 285 629 1.4E-82 T 29-03-2018 AL539_RS21055 01ec89deed88e504322765e835972dd9 802 Gene3D G3DSA:2.60.40.10 192 281 3.8E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS21055 01ec89deed88e504322765e835972dd9 802 SUPERFAMILY SSF49303 637 710 6.23E-5 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL539_RS21055 01ec89deed88e504322765e835972dd9 802 SUPERFAMILY SSF49785 3 188 6.46E-49 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS21055 01ec89deed88e504322765e835972dd9 802 SUPERFAMILY SSF49303 193 285 1.21E-13 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AL539_RS21055 01ec89deed88e504322765e835972dd9 802 Gene3D G3DSA:2.60.40.10 727 802 4.5E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS21055 01ec89deed88e504322765e835972dd9 802 Gene3D G3DSA:2.60.40.10 633 726 1.3E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS21055 01ec89deed88e504322765e835972dd9 802 SUPERFAMILY SSF51445 283 631 1.17E-102 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 8.1E-95 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 Gene3D G3DSA:3.40.50.150 155 271 4.2E-15 T 29-03-2018 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 SUPERFAMILY SSF53335 5 268 4.98E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 4.6E-68 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 Gene3D G3DSA:1.10.1020.10 57 154 4.6E-33 T 29-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AL539_RS10265 649114000fff74ab2e6db322a84f474f 279 PIRSF PIRSF000398 1 274 6.4E-73 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AL539_RS21215 5c9756bd16784fefe6e14fd0a321dc4b 69 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 1.2E-17 T 29-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL539_RS01315 c9108e2a32874abb6e09267311773b34 254 PIRSF PIRSF020736 1 253 2.1E-87 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL539_RS01315 c9108e2a32874abb6e09267311773b34 254 Gene3D G3DSA:1.20.1260.10 3 254 3.1E-68 T 29-03-2018 IPR012347 Ferritin-related AL539_RS01315 c9108e2a32874abb6e09267311773b34 254 SUPERFAMILY SSF47240 7 57 1.37E-72 T 29-03-2018 IPR009078 Ferritin-like superfamily AL539_RS01315 c9108e2a32874abb6e09267311773b34 254 SUPERFAMILY SSF47240 105 251 1.37E-72 T 29-03-2018 IPR009078 Ferritin-like superfamily AL539_RS01315 c9108e2a32874abb6e09267311773b34 254 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 2.7E-103 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL539_RS00665 ed9d3c171518773328329d933eb2f5b7 251 SUPERFAMILY SSF52540 92 231 8.52E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00665 ed9d3c171518773328329d933eb2f5b7 251 Gene3D G3DSA:3.40.50.300 20 232 3.6E-14 T 29-03-2018 AL539_RS00665 ed9d3c171518773328329d933eb2f5b7 251 Pfam PF01695 IstB-like ATP binding protein 54 230 1.7E-59 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AL539_RS00665 ed9d3c171518773328329d933eb2f5b7 251 PIRSF PIRSF003073 1 251 9.6E-73 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AL539_RS00665 ed9d3c171518773328329d933eb2f5b7 251 SMART SM00382 97 234 5.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS25210 53d3ceff90ba30ea04fe8536028ff020 216 Gene3D G3DSA:3.40.50.880 2 216 1.9E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS25210 53d3ceff90ba30ea04fe8536028ff020 216 PIRSF PIRSF006320 1 216 1.9E-104 T 29-03-2018 IPR026041 Glyoxalase ElbB AL539_RS25210 53d3ceff90ba30ea04fe8536028ff020 216 SUPERFAMILY SSF52317 1 215 3.48E-57 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS06315 181122f7e0df1fc0e4af83981cf5adfc 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 4.0E-56 T 29-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AL539_RS06315 181122f7e0df1fc0e4af83981cf5adfc 353 Gene3D G3DSA:3.90.226.10 23 312 1.1E-30 T 29-03-2018 AL539_RS06315 181122f7e0df1fc0e4af83981cf5adfc 353 Pfam PF01343 Peptidase family S49 166 314 4.6E-47 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL539_RS06315 181122f7e0df1fc0e4af83981cf5adfc 353 SUPERFAMILY SSF52096 103 213 4.21E-29 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS06315 181122f7e0df1fc0e4af83981cf5adfc 353 SUPERFAMILY SSF52096 244 303 4.21E-29 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 Gene3D G3DSA:1.10.45.10 467 533 7.5E-11 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 Gene3D G3DSA:1.10.1060.10 534 702 2.7E-12 T 29-03-2018 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 4.4E-62 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 Gene3D G3DSA:3.30.43.10 36 105 2.5E-16 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 SUPERFAMILY SSF46548 649 685 4.32E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 SUPERFAMILY SSF46548 516 617 4.32E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 5.0E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 Gene3D G3DSA:3.30.465.10 106 299 1.9E-44 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 Pfam PF01565 FAD binding domain 52 191 4.5E-36 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 SUPERFAMILY SSF56176 235 277 5.72E-51 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 SUPERFAMILY SSF56176 29 192 5.72E-51 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL539_RS02215 80f2ae4958aa3de45d65cc3a29355a37 1011 SUPERFAMILY SSF55103 252 538 1.11E-53 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 Gene3D G3DSA:2.60.40.1290 837 960 2.9E-4 T 29-03-2018 AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 Pfam PF00932 Lamin Tail Domain 20 129 3.2E-15 T 29-03-2018 IPR001322 Lamin Tail Domain AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 SUPERFAMILY SSF74853 26 121 6.28E-6 T 29-03-2018 IPR001322 Lamin Tail Domain AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 478 836 1.8E-8 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 962 982 0.0026 T 29-03-2018 IPR020008 GlyGly-CTERM domain AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 Gene3D G3DSA:3.60.10.10 475 836 6.0E-28 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 Gene3D G3DSA:2.60.40.1260 13 130 4.4E-12 T 29-03-2018 IPR001322 Lamin Tail Domain AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 Gene3D G3DSA:2.40.50.200 172 297 0.0012 T 29-03-2018 AL539_RS10575 b14a48245a5dc705b97a78a285aceefa 983 SUPERFAMILY SSF56219 473 844 4.75E-34 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 Gene3D G3DSA:2.40.50.140 67 129 6.7E-25 T 29-03-2018 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 SUPERFAMILY SSF50249 70 128 3.17E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.868 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 PIRSF PIRSF005901 2 188 4.1E-63 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 1.5E-76 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 SMART SM01185 69 123 3.5E-25 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.5E-25 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 Gene3D G3DSA:2.40.50.140 131 186 1.3E-26 T 29-03-2018 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 Gene3D G3DSA:2.30.30.30 4 63 4.2E-23 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 29-03-2018 IPR008991 Translation protein SH3-like domain AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 SUPERFAMILY SSF50249 130 187 7.02E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 SMART SM00841 131 186 1.0E-30 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL539_RS10845 288334448acdd28671fb4fb445d7ac25 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.1E-22 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL539_RS25625 8f241adbd39453e6e0ec6bcd401e18b6 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 44 1.5E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS25625 8f241adbd39453e6e0ec6bcd401e18b6 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 112 1.2E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS25625 8f241adbd39453e6e0ec6bcd401e18b6 186 Gene3D G3DSA:2.160.10.10 8 180 1.0E-32 T 29-03-2018 AL539_RS25625 8f241adbd39453e6e0ec6bcd401e18b6 186 SUPERFAMILY SSF51161 7 138 2.88E-30 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS17735 4bddaee4f981d97adf07ed139585b6b7 248 SUPERFAMILY SSF50630 107 242 7.5E-42 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS17735 4bddaee4f981d97adf07ed139585b6b7 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 244 2.2E-47 T 29-03-2018 AL539_RS17735 4bddaee4f981d97adf07ed139585b6b7 248 Gene3D G3DSA:1.20.5.50 17 99 1.3E-4 T 29-03-2018 AL539_RS17735 4bddaee4f981d97adf07ed139585b6b7 248 Gene3D G3DSA:2.40.70.10 104 235 6.4E-45 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS19105 11afabcfdf3cc06487f00398f3c90d0c 470 SUPERFAMILY SSF53720 14 441 5.37E-119 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS19105 11afabcfdf3cc06487f00398f3c90d0c 470 Gene3D G3DSA:3.40.605.10 3 235 1.5E-58 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS19105 11afabcfdf3cc06487f00398f3c90d0c 470 Pfam PF00171 Aldehyde dehydrogenase family 29 440 6.6E-95 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS19105 11afabcfdf3cc06487f00398f3c90d0c 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS19105 11afabcfdf3cc06487f00398f3c90d0c 470 PIRSF PIRSF036492 2 470 3.4E-162 T 29-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 AL539_RS19105 11afabcfdf3cc06487f00398f3c90d0c 470 Gene3D G3DSA:3.40.309.10 236 425 8.0E-62 T 29-03-2018 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 SUPERFAMILY SSF52540 137 378 1.84E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 SMART SM00382 157 301 3.6E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 Pfam PF00158 Sigma-54 interaction domain 137 304 5.4E-73 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 Gene3D G3DSA:1.10.10.60 378 487 7.3E-16 T 29-03-2018 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 Gene3D G3DSA:3.40.50.300 133 309 3.4E-28 T 29-03-2018 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 Gene3D G3DSA:1.10.8.60 310 377 7.1E-21 T 29-03-2018 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 SUPERFAMILY SSF46689 349 392 7.62E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 SUPERFAMILY SSF46689 434 486 7.62E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 1.1E-30 T 29-03-2018 IPR010518 Flagellar regulatory FleQ AL539_RS07430 89b33a7e0fa87057c7fbf67253ec5c60 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 1.0E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL539_RS26025 c082b04176e56dfcca5c3070afb19bf4 195 Gene3D G3DSA:1.10.10.10 137 190 1.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS26025 c082b04176e56dfcca5c3070afb19bf4 195 SMART SM01012 133 188 1.6E-17 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 AL539_RS26025 c082b04176e56dfcca5c3070afb19bf4 195 Pfam PF03861 ANTAR domain 137 188 7.9E-17 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 AL539_RS26025 c082b04176e56dfcca5c3070afb19bf4 195 SUPERFAMILY SSF52172 2 188 1.89E-24 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS14705 535b42244f8336d7c5764ba16ef80bb8 319 SMART SM00729 23 247 6.2E-46 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS14705 535b42244f8336d7c5764ba16ef80bb8 319 SUPERFAMILY SSF102114 13 268 6.54E-49 T 29-03-2018 AL539_RS14705 535b42244f8336d7c5764ba16ef80bb8 319 Pfam PF04055 Radical SAM superfamily 43 202 2.6E-17 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS14705 535b42244f8336d7c5764ba16ef80bb8 319 Gene3D G3DSA:3.20.20.70 1 314 1.8E-37 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS14705 535b42244f8336d7c5764ba16ef80bb8 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 2.3E-17 T 29-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AL539_RS14705 535b42244f8336d7c5764ba16ef80bb8 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 5.1E-135 T 29-03-2018 IPR005911 Protein YhcC-like GO:0051536 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 Gene3D G3DSA:2.40.50.140 5 82 5.7E-34 T 29-03-2018 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.318 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 Pfam PF00366 Ribosomal protein S17 10 77 1.1E-34 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.4E-15 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.4E-15 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.4E-15 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 1.0E-36 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 3.4E-38 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 SUPERFAMILY SSF50249 6 83 3.9E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS13570 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 29-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS00845 49834b37e98bb3c6964400ac1bf6b5c7 165 SUPERFAMILY SSF102712 57 132 1.57E-6 T 29-03-2018 AL539_RS00845 49834b37e98bb3c6964400ac1bf6b5c7 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 165 1.1E-44 T 29-03-2018 IPR001405 RadC protein AL539_RS00845 49834b37e98bb3c6964400ac1bf6b5c7 165 Gene3D G3DSA:3.40.140.10 40 165 1.4E-48 T 29-03-2018 AL539_RS00845 49834b37e98bb3c6964400ac1bf6b5c7 165 Pfam PF04002 RadC-like JAB domain 44 163 1.7E-44 T 29-03-2018 IPR025657 RadC-like JAB domain AL539_RS00845 49834b37e98bb3c6964400ac1bf6b5c7 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL539_RS17850 4744ec2b9af4b41269ee591533921d2f 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.6E-13 T 29-03-2018 IPR007140 Protein of unknown function DUF350 AL539_RS17850 4744ec2b9af4b41269ee591533921d2f 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 4.8E-12 T 29-03-2018 IPR007140 Protein of unknown function DUF350 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 SMART SM00382 93 246 7.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.4E-9 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.11 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 Pfam PF13481 AAA domain 85 224 1.4E-13 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 SUPERFAMILY SSF54211 305 456 4.55E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 SUPERFAMILY SSF54211 257 271 4.55E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 8.4E-226 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 SUPERFAMILY SSF52540 70 294 5.74E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 Gene3D G3DSA:3.40.50.300 53 252 2.1E-18 T 29-03-2018 AL539_RS08265 069f691cb6ef24cb948e602125d8e9ea 459 Gene3D G3DSA:3.30.230.10 253 459 1.3E-48 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS21420 9ed4e234e4391f9bb5ebf01689ef0291 346 SUPERFAMILY SSF64518 61 210 1.44E-5 T 29-03-2018 AL539_RS21420 9ed4e234e4391f9bb5ebf01689ef0291 346 SUPERFAMILY SSF64518 246 305 1.44E-5 T 29-03-2018 AL539_RS21420 9ed4e234e4391f9bb5ebf01689ef0291 346 Gene3D G3DSA:1.20.1330.10 54 312 1.0E-7 T 29-03-2018 AL539_RS24565 574b306835f1250f304420fb82de2bd5 176 Gene3D G3DSA:2.30.110.10 9 175 2.4E-27 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS24565 574b306835f1250f304420fb82de2bd5 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 4.7E-91 T 29-03-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL539_RS24565 574b306835f1250f304420fb82de2bd5 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 7.6E-18 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL539_RS24565 574b306835f1250f304420fb82de2bd5 176 SUPERFAMILY SSF50475 12 162 1.55E-35 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS24565 574b306835f1250f304420fb82de2bd5 176 PIRSF PIRSF004633 1 176 4.2E-78 T 29-03-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL539_RS04455 7e0d22628d5db275e6aa76c407a5cb1d 298 SUPERFAMILY SSF103481 199 294 1.96E-9 T 29-03-2018 AL539_RS04455 7e0d22628d5db275e6aa76c407a5cb1d 298 Pfam PF00892 EamA-like transporter family 161 294 5.6E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS04455 7e0d22628d5db275e6aa76c407a5cb1d 298 Pfam PF00892 EamA-like transporter family 11 145 8.7E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 Gene3D G3DSA:2.40.50.140 1 69 2.1E-28 T 29-03-2018 AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 SUPERFAMILY SSF50249 3 68 6.21E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 7.4E-29 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 PRINTS PR00050 Cold shock protein signature 27 36 2.9E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 PRINTS PR00050 Cold shock protein signature 42 60 2.9E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 PRINTS PR00050 Cold shock protein signature 6 21 2.9E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 PIRSF PIRSF002599 1 69 1.4E-24 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL539_RS20745 dbde29372d2c54bab5a9b0b021581d4e 69 SMART SM00357 5 69 2.7E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.0E-51 T 29-03-2018 AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.0E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.0E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.0E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.0E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 Gene3D G3DSA:3.40.50.720 1 44 8.4E-9 T 29-03-2018 AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 Gene3D G3DSA:3.40.50.720 45 252 2.3E-54 T 29-03-2018 AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 1.9E-4 T 29-03-2018 AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.4E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.4E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.4E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS19610 d4fd5a18670eeeac8074aa7f2c199d2c 252 SUPERFAMILY SSF51735 1 252 1.84E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06295 4e8366d6adc97d2d723d463a4af37e7a 98 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.446 T 29-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AL539_RS06295 4e8366d6adc97d2d723d463a4af37e7a 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 4.9E-18 T 29-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AL539_RS23015 9207dfd48585f28d253ee4dc2bc17fd3 401 Gene3D G3DSA:1.20.1250.20 192 386 3.3E-17 T 29-03-2018 AL539_RS23015 9207dfd48585f28d253ee4dc2bc17fd3 401 SUPERFAMILY SSF103473 5 386 1.31E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS23015 9207dfd48585f28d253ee4dc2bc17fd3 401 Gene3D G3DSA:1.20.1250.20 2 191 9.7E-24 T 29-03-2018 AL539_RS23015 9207dfd48585f28d253ee4dc2bc17fd3 401 Pfam PF07690 Major Facilitator Superfamily 8 265 6.5E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS03560 45d90aa9bdc7b64feee05601b4ac72f2 208 Pfam PF02613 Nitrate reductase delta subunit 43 156 1.0E-30 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL539_RS03560 45d90aa9bdc7b64feee05601b4ac72f2 208 SUPERFAMILY SSF89155 4 188 1.05E-52 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL539_RS03560 45d90aa9bdc7b64feee05601b4ac72f2 208 Gene3D G3DSA:1.10.3480.10 1 195 1.9E-45 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 SUPERFAMILY SSF56176 8 197 7.19E-39 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 79.596 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 SUPERFAMILY SSF56194 207 341 3.53E-46 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 Gene3D G3DSA:3.30.43.10 1 71 1.2E-19 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 2.5E-90 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 Gene3D G3DSA:3.90.78.10 225 337 2.9E-36 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 2.1E-30 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 Gene3D G3DSA:3.30.465.10 73 222 3.9E-43 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL539_RS11265 4519398cdba571b7a65ebac1e1d3e2ec 347 Pfam PF01565 FAD binding domain 23 144 3.4E-17 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 Gene3D G3DSA:1.10.10.10 1 76 4.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 SUPERFAMILY SSF46785 3 72 5.01E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 SMART SM00866 91 228 2.9E-28 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.7E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.7E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 Pfam PF07702 UTRA domain 92 228 9.0E-34 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 SMART SM00345 9 68 1.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 SUPERFAMILY SSF64288 56 230 9.26E-37 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 1.2E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 4.4E-91 T 29-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AL539_RS02250 4d1f3a5829970e321b9816a8c99bc1d7 235 Gene3D G3DSA:3.40.1410.10 77 233 4.5E-36 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS15200 0b48effb490aa5136d2a1bf75a7fc4be 272 Gene3D G3DSA:3.40.50.300 13 270 9.8E-63 T 29-03-2018 AL539_RS15200 0b48effb490aa5136d2a1bf75a7fc4be 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS15200 0b48effb490aa5136d2a1bf75a7fc4be 272 SUPERFAMILY SSF52540 22 258 4.02E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15200 0b48effb490aa5136d2a1bf75a7fc4be 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 3.8E-124 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL539_RS15200 0b48effb490aa5136d2a1bf75a7fc4be 272 SMART SM00382 50 252 9.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS15200 0b48effb490aa5136d2a1bf75a7fc4be 272 Pfam PF00005 ABC transporter 41 197 2.3E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS02790 bd54e9985bcfb5f9e4059bfde30b633c 288 SUPERFAMILY SSF56317 4 281 1.31E-83 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS02790 bd54e9985bcfb5f9e4059bfde30b633c 288 Gene3D G3DSA:3.60.110.10 4 282 1.4E-81 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS02790 bd54e9985bcfb5f9e4059bfde30b633c 288 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.6E-143 T 29-03-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 AL539_RS02790 bd54e9985bcfb5f9e4059bfde30b633c 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 1.5E-59 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 Pfam PF07196 Flagellin hook IN motif 195 252 1.3E-10 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 SUPERFAMILY SSF64518 1 384 2.75E-96 T 29-03-2018 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.9E-43 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 PRINTS PR00207 Flagellin signature 111 134 2.3E-24 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 PRINTS PR00207 Flagellin signature 37 54 2.3E-24 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 PRINTS PR00207 Flagellin signature 76 95 2.3E-24 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS16510 5f7375a4ca4625d2054fa46148fefccb 384 Gene3D G3DSA:1.20.1330.10 40 356 6.2E-69 T 29-03-2018 AL539_RS08760 761dd2f0f9c37231390630028c8bb199 246 Gene3D G3DSA:1.10.3900.10 12 173 7.7E-60 T 29-03-2018 AL539_RS08760 761dd2f0f9c37231390630028c8bb199 246 Gene3D G3DSA:2.60.440.10 174 245 3.6E-28 T 29-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain AL539_RS08760 761dd2f0f9c37231390630028c8bb199 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.881 T 29-03-2018 IPR009777 Cell division protein ZapD AL539_RS08760 761dd2f0f9c37231390630028c8bb199 246 SUPERFAMILY SSF160950 1 245 1.31E-93 T 29-03-2018 IPR009777 Cell division protein ZapD AL539_RS08760 761dd2f0f9c37231390630028c8bb199 246 Pfam PF07072 Cell division protein 18 224 1.3E-75 T 29-03-2018 IPR009777 Cell division protein ZapD AL539_RS12120 fb1d0f1a781dc84328a491793b3dcfb4 401 Gene3D G3DSA:1.20.1250.20 188 383 2.2E-15 T 29-03-2018 AL539_RS12120 fb1d0f1a781dc84328a491793b3dcfb4 401 Gene3D G3DSA:1.20.1250.20 4 185 5.6E-24 T 29-03-2018 AL539_RS12120 fb1d0f1a781dc84328a491793b3dcfb4 401 Pfam PF07690 Major Facilitator Superfamily 13 338 9.6E-36 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS12120 fb1d0f1a781dc84328a491793b3dcfb4 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 3.2E-81 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL539_RS12120 fb1d0f1a781dc84328a491793b3dcfb4 401 SUPERFAMILY SSF103473 5 377 7.59E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS08270 f2434cc66825f935a7c50b11438a0089 782 Pfam PF07238 PilZ domain 145 228 1.1E-7 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AL539_RS08270 f2434cc66825f935a7c50b11438a0089 782 Pfam PF07238 PilZ domain 470 560 1.5E-12 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AL539_RS08270 f2434cc66825f935a7c50b11438a0089 782 Gene3D G3DSA:2.40.10.220 465 593 1.7E-14 T 29-03-2018 AL539_RS08270 f2434cc66825f935a7c50b11438a0089 782 SUPERFAMILY SSF141371 466 554 1.7E-7 T 29-03-2018 AL539_RS08270 f2434cc66825f935a7c50b11438a0089 782 Gene3D G3DSA:2.40.10.220 141 263 3.9E-8 T 29-03-2018 AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 SUPERFAMILY SSF46785 4 117 9.3E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 2.2E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 SUPERFAMILY SSF53850 95 300 1.18E-34 T 29-03-2018 AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 Gene3D G3DSA:1.10.10.10 2 87 4.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 Pfam PF03466 LysR substrate binding domain 96 299 1.6E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 Gene3D G3DSA:3.40.190.10 95 183 6.1E-16 T 29-03-2018 AL539_RS15225 c343c2f7b81d76e68171f8a74ef5d810 301 Gene3D G3DSA:3.40.190.10 184 275 7.5E-13 T 29-03-2018 AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 SUPERFAMILY SSF52540 1 239 9.98E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 Gene3D G3DSA:3.30.70.260 255 344 3.3E-28 T 29-03-2018 AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 Gene3D G3DSA:3.40.50.300 1 254 4.0E-75 T 29-03-2018 AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 8.4E-198 T 29-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 Pfam PF00005 ABC transporter 21 169 2.7E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 SMART SM00930 265 340 1.8E-28 T 29-03-2018 IPR018449 NIL domain AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 SUPERFAMILY SSF55021 248 343 1.26E-26 T 29-03-2018 AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 SMART SM00382 30 235 8.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS16015 40ad0cefc653631103d064199d7298d7 344 Pfam PF09383 NIL domain 268 339 1.5E-21 T 29-03-2018 IPR018449 NIL domain AL539_RS06915 6958ca37a08d6b7db308d1e752836197 294 Gene3D G3DSA:2.70.98.10 5 293 5.2E-66 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL539_RS06915 6958ca37a08d6b7db308d1e752836197 294 SUPERFAMILY SSF74650 8 289 2.13E-76 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL539_RS06915 6958ca37a08d6b7db308d1e752836197 294 Pfam PF01263 Aldose 1-epimerase 27 291 9.5E-53 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL539_RS06915 6958ca37a08d6b7db308d1e752836197 294 PIRSF PIRSF016020 4 294 1.5E-65 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AL539_RS18790 6cb49e330e61bdede43d2dbf73c2552f 218 Pfam PF07947 YhhN family 24 204 1.5E-41 T 29-03-2018 IPR012506 YhhN-like GO:0016021 AL539_RS18005 388b41fe99f869acab7216bbaf2d25e2 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 1.9E-19 T 29-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 AL539_RS18005 388b41fe99f869acab7216bbaf2d25e2 553 SMART SM00382 46 189 1.1E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS18005 388b41fe99f869acab7216bbaf2d25e2 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.9E-22 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AL539_RS18005 388b41fe99f869acab7216bbaf2d25e2 553 Gene3D G3DSA:3.40.50.300 3 239 2.0E-19 T 29-03-2018 AL539_RS18005 388b41fe99f869acab7216bbaf2d25e2 553 SUPERFAMILY SSF52540 18 294 1.63E-20 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18005 388b41fe99f869acab7216bbaf2d25e2 553 Gene3D G3DSA:3.40.50.300 398 544 0.22 T 29-03-2018 AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 SMART SM00382 385 572 1.8E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 Pfam PF00664 ABC transporter transmembrane region 24 312 3.5E-30 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 Gene3D G3DSA:1.20.1560.10 3 345 2.6E-46 T 29-03-2018 AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 SUPERFAMILY SSF90123 12 347 8.5E-57 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 SUPERFAMILY SSF52540 357 591 8.56E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 Pfam PF00005 ABC transporter 376 524 1.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03940 67fdfda9ae61d07de7b4ee5481830e99 598 Gene3D G3DSA:3.40.50.300 348 597 4.3E-69 T 29-03-2018 AL539_RS22655 a7296168fde6d9f840b370fa39735de0 310 SMART SM00382 39 233 1.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS22655 a7296168fde6d9f840b370fa39735de0 310 SUPERFAMILY SSF52540 5 254 6.08E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22655 a7296168fde6d9f840b370fa39735de0 310 Gene3D G3DSA:3.40.50.300 2 287 2.2E-70 T 29-03-2018 AL539_RS22655 a7296168fde6d9f840b370fa39735de0 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 4.3E-8 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS22655 a7296168fde6d9f840b370fa39735de0 310 Pfam PF00005 ABC transporter 30 184 1.4E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS22655 a7296168fde6d9f840b370fa39735de0 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS18140 f1003e317b00e76352010492554c2986 283 Gene3D G3DSA:1.20.1080.10 2 270 6.0E-63 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL539_RS18140 f1003e317b00e76352010492554c2986 283 Pfam PF01226 Formate/nitrite transporter 9 258 1.5E-57 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL539_RS23535 f29b3ca5ce3befb04dfa0b639f5f9808 396 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 396 41.672 T 29-03-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 AL539_RS23535 f29b3ca5ce3befb04dfa0b639f5f9808 396 Pfam PF07690 Major Facilitator Superfamily 10 344 1.7E-41 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS23535 f29b3ca5ce3befb04dfa0b639f5f9808 396 SUPERFAMILY SSF103473 3 387 5.49E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS23535 f29b3ca5ce3befb04dfa0b639f5f9808 396 Gene3D G3DSA:1.20.1250.20 1 188 3.9E-34 T 29-03-2018 AL539_RS23535 f29b3ca5ce3befb04dfa0b639f5f9808 396 Gene3D G3DSA:1.20.1250.20 189 393 4.7E-6 T 29-03-2018 AL539_RS23535 f29b3ca5ce3befb04dfa0b639f5f9808 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 SMART SM00642 27 438 4.1E-57 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 Gene3D G3DSA:3.20.20.80 36 199 9.1E-17 T 29-03-2018 AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 PIRSF PIRSF001021 3 507 2.2E-226 T 29-03-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 Gene3D G3DSA:3.20.20.80 200 426 1.7E-52 T 29-03-2018 AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 SUPERFAMILY SSF51011 420 504 3.29E-31 T 29-03-2018 AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 SUPERFAMILY SSF51445 28 393 8.72E-95 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 Pfam PF00128 Alpha amylase, catalytic domain 57 387 7.8E-25 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS18065 b4dac3e7669247ab8cd123337eeff367 507 Gene3D G3DSA:2.60.40.1180 427 507 5.1E-26 T 29-03-2018 AL539_RS13880 5ef9e5eae63c4dcbd9f69f30125977d7 145 Gene3D G3DSA:3.40.50.620 1 145 1.8E-33 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS13880 5ef9e5eae63c4dcbd9f69f30125977d7 145 PRINTS PR01438 Universal stress protein signature 102 114 2.3E-11 T 29-03-2018 IPR006015 Universal stress protein A AL539_RS13880 5ef9e5eae63c4dcbd9f69f30125977d7 145 PRINTS PR01438 Universal stress protein signature 2 20 2.3E-11 T 29-03-2018 IPR006015 Universal stress protein A AL539_RS13880 5ef9e5eae63c4dcbd9f69f30125977d7 145 PRINTS PR01438 Universal stress protein signature 120 142 2.3E-11 T 29-03-2018 IPR006015 Universal stress protein A AL539_RS13880 5ef9e5eae63c4dcbd9f69f30125977d7 145 SUPERFAMILY SSF52402 2 143 7.7E-35 T 29-03-2018 AL539_RS13880 5ef9e5eae63c4dcbd9f69f30125977d7 145 Pfam PF00582 Universal stress protein family 1 142 2.1E-32 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS13880 5ef9e5eae63c4dcbd9f69f30125977d7 145 PIRSF PIRSF006276 1 145 1.5E-19 T 29-03-2018 IPR006015 Universal stress protein A AL539_RS08660 e5fa6e7070ad4389d277fd16edaff4db 301 Gene3D G3DSA:3.40.50.620 1 176 1.1E-77 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS08660 e5fa6e7070ad4389d277fd16edaff4db 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 7.9E-104 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL539_RS08660 e5fa6e7070ad4389d277fd16edaff4db 301 Gene3D G3DSA:3.30.1300.10 177 296 2.1E-27 T 29-03-2018 AL539_RS08660 e5fa6e7070ad4389d277fd16edaff4db 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.123 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL539_RS08660 e5fa6e7070ad4389d277fd16edaff4db 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 5.5E-9 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS08660 e5fa6e7070ad4389d277fd16edaff4db 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.7E-100 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL539_RS08660 e5fa6e7070ad4389d277fd16edaff4db 301 SUPERFAMILY SSF52374 1 280 1.27E-106 T 29-03-2018 AL539_RS16605 44edeea4d7ef9f6cd739c280e0004428 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.5E-103 T 29-03-2018 IPR010099 Epimerase family protein SDR39U1 AL539_RS16605 44edeea4d7ef9f6cd739c280e0004428 304 SUPERFAMILY SSF51735 1 299 2.2E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS16605 44edeea4d7ef9f6cd739c280e0004428 304 Gene3D G3DSA:3.40.50.720 1 304 1.6E-38 T 29-03-2018 AL539_RS16605 44edeea4d7ef9f6cd739c280e0004428 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 1.1E-23 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL539_RS16605 44edeea4d7ef9f6cd739c280e0004428 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 8.0E-16 T 29-03-2018 IPR013549 Domain of unknown function DUF1731 AL539_RS23760 b276a9e0b2a4d3d5a4b436a808f96459 307 Pfam PF00892 EamA-like transporter family 6 136 8.1E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS23760 b276a9e0b2a4d3d5a4b436a808f96459 307 Pfam PF00892 EamA-like transporter family 150 288 2.6E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS23760 b276a9e0b2a4d3d5a4b436a808f96459 307 SUPERFAMILY SSF103481 182 288 6.8E-9 T 29-03-2018 AL539_RS23760 b276a9e0b2a4d3d5a4b436a808f96459 307 SUPERFAMILY SSF103481 41 140 5.49E-11 T 29-03-2018 AL539_RS12190 8224803e89d505f7b567aa96fd04a1e3 257 Pfam PF13614 AAA domain 2 178 5.6E-62 T 29-03-2018 IPR025669 AAA domain AL539_RS12190 8224803e89d505f7b567aa96fd04a1e3 257 PIRSF PIRSF009320 88 251 6.6E-9 T 29-03-2018 AL539_RS12190 8224803e89d505f7b567aa96fd04a1e3 257 PIRSF PIRSF009320 2 70 1.6E-13 T 29-03-2018 AL539_RS12190 8224803e89d505f7b567aa96fd04a1e3 257 Gene3D G3DSA:3.40.50.300 1 255 4.2E-60 T 29-03-2018 AL539_RS12190 8224803e89d505f7b567aa96fd04a1e3 257 SUPERFAMILY SSF52540 2 254 6.9E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 1.3E-135 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 SUPERFAMILY SSF52402 7 170 1.26E-47 T 29-03-2018 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 Pfam PF00764 Arginosuccinate synthase 10 396 1.5E-145 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 SUPERFAMILY SSF69864 177 402 6.15E-88 T 29-03-2018 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 Gene3D G3DSA:3.90.1260.10 168 358 4.2E-82 T 29-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.766 T 29-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 Gene3D G3DSA:3.40.50.620 2 167 7.8E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 Gene3D G3DSA:1.20.5.470 368 400 4.1E-14 T 29-03-2018 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS10340 49cfdfcd05b1b6c5ea6f284dc15a5122 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 Gene3D G3DSA:3.90.780.10 372 576 1.5E-29 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 374 540 3.7E-24 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 Gene3D G3DSA:3.60.21.10 1 370 1.3E-71 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 PRINTS PR01607 Apyrase family signature 216 233 3.2E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 PRINTS PR01607 Apyrase family signature 10 28 3.2E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 PRINTS PR01607 Apyrase family signature 275 295 3.2E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 PRINTS PR01607 Apyrase family signature 235 258 3.2E-12 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 252 4.3E-9 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 SUPERFAMILY SSF55816 369 564 4.71E-39 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL539_RS18665 df92eb31d0637ad8467c4e8ed3a07035 580 SUPERFAMILY SSF56300 11 327 5.06E-73 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS08055 660f8c73ee1390f635c855f6ed3c3285 269 SUPERFAMILY SSF69572 9 268 1.15E-64 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL539_RS08055 660f8c73ee1390f635c855f6ed3c3285 269 Gene3D G3DSA:3.40.50.720 6 269 5.0E-53 T 29-03-2018 AL539_RS08055 660f8c73ee1390f635c855f6ed3c3285 269 Pfam PF00899 ThiF family 24 195 2.8E-38 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.3E-170 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.377 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.1E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:3.10.20.30 263 362 1.3E-45 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 8.0E-40 T 29-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:3.40.50.300 1 79 5.2E-8 T 29-03-2018 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 SUPERFAMILY SSF52540 3 301 6.99E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:1.10.150.300 110 200 5.6E-26 T 29-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 SUPERFAMILY SSF81271 279 360 4.36E-37 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL539_RS16265 0e080b36246df5ebebb34f0e62a2563a 363 PIRSF PIRSF006641 1 363 4.2E-158 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL539_RS06365 ef8db576c59980f83aa3441cb3b3c870 196 SUPERFAMILY SSF56925 28 196 1.39E-19 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS06365 ef8db576c59980f83aa3441cb3b3c870 196 Gene3D G3DSA:2.40.160.20 13 196 3.3E-16 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS06365 ef8db576c59980f83aa3441cb3b3c870 196 Pfam PF13505 Outer membrane protein beta-barrel domain 10 194 2.2E-8 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS04005 c6caaad377202a62759922d3c4e2acb9 365 Gene3D G3DSA:1.10.3720.10 26 365 1.4E-40 T 29-03-2018 AL539_RS04005 c6caaad377202a62759922d3c4e2acb9 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 6.4E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04005 c6caaad377202a62759922d3c4e2acb9 365 SUPERFAMILY SSF161098 154 346 7.85E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04005 c6caaad377202a62759922d3c4e2acb9 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 8.1E-23 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS24185 f3df5e95ae9f196f818dd904ad146e44 309 Gene3D G3DSA:3.40.50.1980 148 305 2.4E-22 T 29-03-2018 AL539_RS24185 f3df5e95ae9f196f818dd904ad146e44 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 64 82 5.9E-6 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS24185 f3df5e95ae9f196f818dd904ad146e44 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 5.9E-6 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS24185 f3df5e95ae9f196f818dd904ad146e44 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 95 110 5.9E-6 T 29-03-2018 IPR008091 Ferrichrome-binding periplasmic protein AL539_RS24185 f3df5e95ae9f196f818dd904ad146e44 309 SUPERFAMILY SSF53807 42 302 1.92E-54 T 29-03-2018 AL539_RS24185 f3df5e95ae9f196f818dd904ad146e44 309 Pfam PF01497 Periplasmic binding protein 47 276 1.5E-21 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL539_RS24185 f3df5e95ae9f196f818dd904ad146e44 309 Gene3D G3DSA:3.40.50.1980 27 147 1.6E-27 T 29-03-2018 AL539_RS17030 4f6376186dbd62157b37bf9ea559cf89 259 Pfam PF01553 Acyltransferase 80 193 3.4E-14 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS17030 4f6376186dbd62157b37bf9ea559cf89 259 Gene3D G3DSA:3.40.1130.10 38 257 2.5E-25 T 29-03-2018 AL539_RS17030 4f6376186dbd62157b37bf9ea559cf89 259 SUPERFAMILY SSF69593 4 253 9.81E-24 T 29-03-2018 AL539_RS17030 4f6376186dbd62157b37bf9ea559cf89 259 SMART SM00563 90 200 1.9E-12 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 SUPERFAMILY SSF103190 30 164 6.67E-23 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 Gene3D G3DSA:1.10.287.950 282 519 2.1E-53 T 29-03-2018 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 302 483 9.8E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 Pfam PF00672 HAMP domain 190 236 2.0E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 SMART SM00304 188 242 1.7E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 SUPERFAMILY SSF58104 210 519 1.44E-75 T 29-03-2018 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 Pfam PF17203 Single cache domain 3 57 164 8.0E-12 T 29-03-2018 IPR033463 Single cache domain 3 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 Gene3D G3DSA:3.30.450.20 17 164 3.1E-14 T 29-03-2018 AL539_RS24660 ef83d0e30efa823c0ef68495eb04f477 519 SMART SM00283 257 518 4.6E-73 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS08035 369008577ff6efef842ec4867969e77d 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 183 6.4E-63 T 29-03-2018 IPR006287 Protein DJ-1 AL539_RS08035 369008577ff6efef842ec4867969e77d 199 Gene3D G3DSA:3.40.50.880 1 190 1.1E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS08035 369008577ff6efef842ec4867969e77d 199 SUPERFAMILY SSF52317 3 189 1.63E-43 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS08035 369008577ff6efef842ec4867969e77d 199 Pfam PF01965 DJ-1/PfpI family 3 169 8.2E-39 T 29-03-2018 IPR002818 DJ-1/PfpI AL539_RS24825 e1572bc28bf5c0a297bc2df5b2a4eae3 308 Pfam PF00005 ABC transporter 22 165 2.6E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24825 e1572bc28bf5c0a297bc2df5b2a4eae3 308 Gene3D G3DSA:3.40.50.300 1 245 8.6E-71 T 29-03-2018 AL539_RS24825 e1572bc28bf5c0a297bc2df5b2a4eae3 308 SUPERFAMILY SSF52540 4 227 4.44E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24825 e1572bc28bf5c0a297bc2df5b2a4eae3 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS24825 e1572bc28bf5c0a297bc2df5b2a4eae3 308 SMART SM00382 30 212 2.0E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 Gene3D G3DSA:3.40.50.1980 18 180 1.7E-30 T 29-03-2018 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00691 Adhesin B signature 72 91 3.8E-9 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00691 Adhesin B signature 28 49 3.8E-9 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00691 Adhesin B signature 128 147 3.8E-9 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00691 Adhesin B signature 53 71 3.8E-9 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00691 Adhesin B signature 235 252 3.8E-9 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00690 Adhesin family signature 239 257 1.3E-7 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00690 Adhesin family signature 72 89 1.3E-7 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00690 Adhesin family signature 59 72 1.3E-7 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 PRINTS PR00690 Adhesin family signature 186 207 1.3E-7 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 295 1.4E-45 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 SUPERFAMILY SSF53807 27 297 1.96E-62 T 29-03-2018 AL539_RS21975 d066d3dceedada41ede1fd82f74f0222 308 Gene3D G3DSA:3.40.50.1980 181 298 1.2E-23 T 29-03-2018 AL539_RS25930 4484ffe7b0d965b8ad609ab5938e2121 349 Gene3D G3DSA:1.10.10.10 282 347 0.0029 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.24 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 Gene3D G3DSA:3.30.413.10 146 351 1.1E-48 T 29-03-2018 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 SUPERFAMILY SSF56014 154 350 9.29E-58 T 29-03-2018 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 SUPERFAMILY SSF55124 352 429 9.72E-21 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 Gene3D G3DSA:3.30.413.10 432 570 1.5E-24 T 29-03-2018 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 SUPERFAMILY SSF56014 435 567 3.27E-32 T 29-03-2018 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 7.9E-45 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 562 1.6E-5 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.3E-13 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 5.7E-14 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 SUPERFAMILY SSF55124 19 150 3.27E-27 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS10175 895b59036d3f296ba9a83ba72cea7765 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 1.1E-282 T 29-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.6E-36 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.2E-163 T 29-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 Gene3D G3DSA:1.10.730.10 442 577 4.8E-48 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 SUPERFAMILY SSF55190 2 96 3.4E-22 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 1.0E-199 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 SUPERFAMILY SSF47323 455 577 6.54E-36 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 Gene3D G3DSA:3.30.1360.70 1 106 1.1E-27 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.157 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 SMART SM00836 461 577 9.0E-42 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 Gene3D G3DSA:3.40.50.620 107 441 2.7E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 SUPERFAMILY SSF52374 111 454 2.58E-93 T 29-03-2018 AL539_RS16855 41b261a09de1a0d4a5aa23ebd147c036 577 SMART SM01016 5 87 2.0E-28 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL539_RS10170 22f04af6fd7f27ba0bdca733261087f8 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 2.9E-87 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL539_RS10170 22f04af6fd7f27ba0bdca733261087f8 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.149 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL539_RS10170 22f04af6fd7f27ba0bdca733261087f8 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 7.1E-50 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AL539_RS10170 22f04af6fd7f27ba0bdca733261087f8 259 PIRSF PIRSF000857 6 253 2.2E-55 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL539_RS10170 22f04af6fd7f27ba0bdca733261087f8 259 SUPERFAMILY SSF52402 26 213 4.61E-55 T 29-03-2018 AL539_RS10170 22f04af6fd7f27ba0bdca733261087f8 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 8.3E-93 T 29-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AL539_RS10170 22f04af6fd7f27ba0bdca733261087f8 259 Gene3D G3DSA:3.40.50.620 13 257 7.7E-41 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS07290 a0fc651bc957557a18ddd87a9eb37fbe 354 Gene3D G3DSA:2.40.50.180 232 322 2.6E-4 T 29-03-2018 AL539_RS07290 a0fc651bc957557a18ddd87a9eb37fbe 354 Pfam PF01584 CheW-like domain 211 343 1.3E-15 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS07290 a0fc651bc957557a18ddd87a9eb37fbe 354 SUPERFAMILY SSF50341 209 344 1.7E-14 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS07290 a0fc651bc957557a18ddd87a9eb37fbe 354 PIRSF PIRSF020479 5 354 5.2E-134 T 29-03-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AL539_RS07290 a0fc651bc957557a18ddd87a9eb37fbe 354 SMART SM00260 207 341 2.9E-4 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 Pfam PF00005 ABC transporter 352 500 1.3E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 Pfam PF00664 ABC transporter transmembrane region 21 291 7.6E-44 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 Gene3D G3DSA:1.20.1560.10 2 320 2.7E-63 T 29-03-2018 AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 SUPERFAMILY SSF52540 335 571 5.13E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 SMART SM00382 361 547 2.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 SUPERFAMILY SSF90123 7 320 2.09E-73 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS03200 cefdd5de16da56a0e71639cfd65a1791 579 Gene3D G3DSA:3.40.50.300 322 577 4.4E-61 T 29-03-2018 AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 247 314 1.1E-20 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 Gene3D G3DSA:2.30.330.10 156 227 1.8E-8 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 SUPERFAMILY SSF101801 166 220 1.44E-6 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 278 291 1.6E-7 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 291 306 1.6E-7 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 245 261 1.6E-7 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 262 278 1.6E-7 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 40 314 1.2E-65 T 29-03-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 SUPERFAMILY SSF101801 242 318 5.36E-20 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS04425 325fd25edb9f6c5735e5d0c06af4466a 322 Gene3D G3DSA:2.30.330.10 228 321 9.2E-22 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.718 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 Gene3D G3DSA:3.30.1360.80 3 161 3.3E-64 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 8.8E-62 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 SUPERFAMILY SSF63411 4 162 3.85E-67 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 1.0E-80 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.1E-51 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.1E-51 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.1E-51 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.1E-51 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.1E-51 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS08805 ff3966a4034e5ebaf206519fb069bf04 172 PIRSF PIRSF006160 1 162 1.1E-67 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL539_RS15905 f2046fb0f29595da3100024846804c41 155 SUPERFAMILY SSF48013 7 153 4.97E-39 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL539_RS15905 f2046fb0f29595da3100024846804c41 155 Pfam PF01029 NusB family 11 149 1.9E-35 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL539_RS15905 f2046fb0f29595da3100024846804c41 155 Gene3D G3DSA:1.10.940.10 5 155 1.8E-41 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL539_RS15905 f2046fb0f29595da3100024846804c41 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 23.114 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 AL539_RS15905 f2046fb0f29595da3100024846804c41 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 151 2.9E-43 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 AL539_RS11665 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 Gene3D G3DSA:3.10.20.30 1 89 3.0E-21 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS11665 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 78 4.3E-14 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS11665 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL539_RS11665 4017c0dd6aaddcfbb1abfd9fdab5fbe3 89 SUPERFAMILY SSF54292 1 87 9.04E-26 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 SUPERFAMILY SSF48452 27 145 2.39E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 Gene3D G3DSA:1.25.40.10 21 161 3.0E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 Pfam PF07720 Tetratricopeptide repeat 77 98 0.11 T 29-03-2018 IPR011716 Tetratricopeptide TPR-3 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 Pfam PF07720 Tetratricopeptide repeat 39 70 2.9E-7 T 29-03-2018 IPR011716 Tetratricopeptide TPR-3 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 49 68 3.0E-34 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 24 47 3.0E-34 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 73 95 3.0E-34 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 105 127 3.0E-34 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 155 2.4E-44 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AL539_RS04360 4a1a0084411129df47ff2a83e461c321 161 PIRSF PIRSF003165 1 161 3.9E-59 T 29-03-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 29-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 Gene3D G3DSA:3.40.50.10490 13 241 5.8E-52 T 29-03-2018 AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 2.4E-135 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.48 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 SUPERFAMILY SSF53697 8 250 7.56E-72 T 29-03-2018 AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 Pfam PF01380 SIS domain 129 212 2.3E-7 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 Gene3D G3DSA:1.10.8.10 242 270 1.9E-10 T 29-03-2018 AL539_RS22715 dd49c472ef20c1388f8a95ff7f969663 300 Gene3D G3DSA:1.10.8.10 271 297 4.0E-4 T 29-03-2018 AL539_RS12300 e4423cb3baa9cc5ef10e369ecb9820c5 417 SUPERFAMILY SSF53383 13 411 1.75E-61 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS12300 e4423cb3baa9cc5ef10e369ecb9820c5 417 Pfam PF00155 Aminotransferase class I and II 67 401 1.2E-27 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS12300 e4423cb3baa9cc5ef10e369ecb9820c5 417 Gene3D G3DSA:3.40.640.10 69 297 2.1E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS12300 e4423cb3baa9cc5ef10e369ecb9820c5 417 Gene3D G3DSA:3.90.1150.10 298 413 1.3E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS05950 2e3873ad08238934c8bee7bf4f25ff04 206 Pfam PF01300 Telomere recombination 23 198 1.2E-46 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AL539_RS05950 2e3873ad08238934c8bee7bf4f25ff04 206 Gene3D G3DSA:3.90.870.10 1 205 5.0E-61 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS05950 2e3873ad08238934c8bee7bf4f25ff04 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 5.5E-72 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AL539_RS05950 2e3873ad08238934c8bee7bf4f25ff04 206 SUPERFAMILY SSF55821 1 203 6.71E-65 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 Gene3D G3DSA:1.10.10.10 5 89 2.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 SUPERFAMILY SSF53850 92 306 2.53E-48 T 29-03-2018 AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 Pfam PF03466 LysR substrate binding domain 97 308 3.1E-29 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 SUPERFAMILY SSF46785 7 86 1.59E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 Gene3D G3DSA:3.40.190.10 194 281 1.3E-15 T 29-03-2018 AL539_RS11780 43008f5159aca7ce1d31917968e6f78b 313 Gene3D G3DSA:3.40.190.10 97 193 2.2E-9 T 29-03-2018 AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 SMART SM00267 401 577 3.9E-60 T 29-03-2018 IPR000160 GGDEF domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Gene3D G3DSA:3.30.450.20 36 140 0.0029 T 29-03-2018 AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Pfam PF08448 PAS fold 285 395 5.6E-14 T 29-03-2018 IPR013656 PAS fold-4 AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Pfam PF13188 PAS domain 40 91 2.1E-4 T 29-03-2018 IPR000014 PAS domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Gene3D G3DSA:3.30.450.20 141 217 2.2E-5 T 29-03-2018 AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 SUPERFAMILY SSF55785 266 392 1.01E-18 T 29-03-2018 IPR000014 PAS domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Gene3D G3DSA:3.30.450.20 278 419 5.8E-24 T 29-03-2018 AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Gene3D G3DSA:3.30.450.20 218 277 1.5E-4 T 29-03-2018 AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 SMART SM00091 158 227 12.0 T 29-03-2018 IPR000014 PAS domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 SMART SM00091 279 346 0.013 T 29-03-2018 IPR000014 PAS domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 SMART SM00091 38 104 18.0 T 29-03-2018 IPR000014 PAS domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 575 1.2E-48 T 29-03-2018 IPR000160 GGDEF domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 SUPERFAMILY SSF55073 417 577 8.63E-46 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Gene3D G3DSA:3.30.70.270 420 581 2.5E-50 T 29-03-2018 AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 5.4E-49 T 29-03-2018 IPR000160 GGDEF domain AL539_RS14710 bed35ead4929aefc53f29e011db45746 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 6.9E-15 T 29-03-2018 IPR000014 PAS domain AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 1.3E-149 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 SUPERFAMILY SSF102114 52 315 3.92E-68 T 29-03-2018 AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.346 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 SMART SM00729 84 293 2.2E-19 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 Pfam PF04055 Radical SAM superfamily 91 251 4.4E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 7.1E-8 T 29-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 Gene3D G3DSA:3.20.20.70 29 302 9.5E-28 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS16060 2334983b96524dafb7fc48e2d6e6cd37 321 PIRSF PIRSF005963 1 321 2.0E-129 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL539_RS23860 cf7afa48f0f3b4cb4bb45b218d9493a6 177 Pfam PF05229 Spore Coat Protein U domain 24 174 5.9E-31 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS23860 cf7afa48f0f3b4cb4bb45b218d9493a6 177 SMART SM00972 117 174 9.2E-4 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 Pfam PF07549 SecD/SecF GG Motif 116 141 2.5E-7 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 3.6E-5 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 3.6E-5 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 3.6E-5 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 3.2E-82 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 Pfam PF02355 Protein export membrane protein 436 597 2.3E-17 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 4.2E-151 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 Gene3D G3DSA:1.20.1640.10 391 608 3.1E-29 T 29-03-2018 AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 SUPERFAMILY SSF82866 413 609 5.23E-44 T 29-03-2018 AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 49.699 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL539_RS15265 4587fc8b736e03ae612d96d777822885 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 8.1E-37 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 Gene3D G3DSA:1.10.287.990 20 85 1.3E-24 T 29-03-2018 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 PIRSF PIRSF000349 1 202 2.4E-81 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 SUPERFAMILY SSF46609 1 90 3.4E-30 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 SUPERFAMILY SSF54719 87 200 1.02E-43 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.8E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.8E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.8E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.8E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.8E-21 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 3.8E-40 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS10905 a456c7b9b3740f1be2b651335e097632 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.0E-27 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 Gene3D G3DSA:3.30.70.20 194 227 2.8E-6 T 29-03-2018 AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 Gene3D G3DSA:3.30.70.20 228 259 3.9E-8 T 29-03-2018 AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 Pfam PF12801 4Fe-4S binding domain 174 211 3.0E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 Pfam PF12801 4Fe-4S binding domain 82 127 1.2E-13 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 Gene3D G3DSA:3.30.70.20 260 284 1.1E-5 T 29-03-2018 AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 2.9E-110 T 29-03-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 3.7E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 SUPERFAMILY SSF54862 94 142 7.74E-20 T 29-03-2018 AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 SUPERFAMILY SSF54862 190 277 7.74E-20 T 29-03-2018 AL539_RS23965 6caf63a85fcc1b212983726366a305bf 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS08940 dd13e2ef4dc364a5e3b5adec521a023b 307 SUPERFAMILY SSF51261 48 306 1.36E-51 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS08940 dd13e2ef4dc364a5e3b5adec521a023b 307 Pfam PF01476 LysM domain 49 91 5.1E-11 T 29-03-2018 IPR018392 LysM domain AL539_RS08940 dd13e2ef4dc364a5e3b5adec521a023b 307 Gene3D G3DSA:3.10.350.10 42 135 7.5E-13 T 29-03-2018 AL539_RS08940 dd13e2ef4dc364a5e3b5adec521a023b 307 Pfam PF01551 Peptidase family M23 208 302 5.7E-31 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS08940 dd13e2ef4dc364a5e3b5adec521a023b 307 Gene3D G3DSA:2.70.70.10 136 307 2.1E-40 T 29-03-2018 AL539_RS08940 dd13e2ef4dc364a5e3b5adec521a023b 307 SMART SM00257 48 92 1.1E-10 T 29-03-2018 IPR018392 LysM domain AL539_RS01280 15c0046c7c289967b6ee218b2271b86e 318 Pfam PF03547 Membrane transport protein 164 307 5.4E-15 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 SMART SM01068 1 63 1.5E-21 T 29-03-2018 IPR009342 Putative carbohydrate binding domain AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 4.6E-209 T 29-03-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 Gene3D G3DSA:1.50.10.10 311 694 8.7E-73 T 29-03-2018 AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 Gene3D G3DSA:2.70.98.40 1 278 8.7E-84 T 29-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 SUPERFAMILY SSF74650 1 269 1.32E-81 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 SUPERFAMILY SSF48208 274 801 2.99E-108 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 Pfam PF06165 Glycosyltransferase family 36 21 267 1.5E-83 T 29-03-2018 IPR010383 Glycosyl hydrolase 94 AL539_RS08570 84944cfbd615f836b794eff83fb8e402 802 Gene3D G3DSA:2.60.420.10 718 802 2.5E-25 T 29-03-2018 AL539_RS01590 a7fbadf53d67284e67d5b9298cc1949c 205 Gene3D G3DSA:1.10.3890.10 4 203 7.4E-81 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL539_RS01590 a7fbadf53d67284e67d5b9298cc1949c 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.903 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL539_RS01590 a7fbadf53d67284e67d5b9298cc1949c 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.2E-76 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL539_RS01590 a7fbadf53d67284e67d5b9298cc1949c 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 1.0E-102 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL539_RS01590 a7fbadf53d67284e67d5b9298cc1949c 205 SUPERFAMILY SSF101322 2 204 9.29E-80 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AL539_RS07005 3625f7d0aedfd288f31565ab02084d42 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.561 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL539_RS07005 3625f7d0aedfd288f31565ab02084d42 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 7.9E-15 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL539_RS07005 3625f7d0aedfd288f31565ab02084d42 181 SUPERFAMILY SSF53271 11 178 3.23E-52 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS07005 3625f7d0aedfd288f31565ab02084d42 181 Gene3D G3DSA:3.40.50.2020 2 180 9.5E-41 T 29-03-2018 AL539_RS07005 3625f7d0aedfd288f31565ab02084d42 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 1.8E-71 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL539_RS13670 250c325b7f576135bf02c0592781591f 198 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 1.5E-6 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal AL539_RS13670 250c325b7f576135bf02c0592781591f 198 Gene3D G3DSA:3.10.350.10 111 169 1.1E-4 T 29-03-2018 AL539_RS13670 250c325b7f576135bf02c0592781591f 198 Pfam PF04225 Opacity-associated protein A LysM-like domain 114 198 1.1E-37 T 29-03-2018 IPR007340 Opacity-associated protein A AL539_RS22200 5782112d482a437d872d83ee0b99b865 155 SUPERFAMILY SSF56784 4 141 5.29E-24 T 29-03-2018 IPR023214 HAD-like domain AL539_RS22200 5782112d482a437d872d83ee0b99b865 155 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 130 3.0E-11 T 29-03-2018 IPR023214 HAD-like domain AL539_RS22200 5782112d482a437d872d83ee0b99b865 155 Gene3D G3DSA:3.40.50.1000 18 148 3.6E-21 T 29-03-2018 IPR023214 HAD-like domain AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.1E-82 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 Gene3D G3DSA:1.20.5.420 85 139 2.9E-25 T 29-03-2018 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PIRSF PIRSF002560 1 157 3.1E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 Pfam PF00210 Ferritin-like domain 8 143 9.7E-41 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 23 43 6.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 86 106 6.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 44 64 6.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 107 127 6.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 3 22 6.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 65 85 6.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 128 149 6.3E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 Gene3D G3DSA:1.20.1260.10 1 78 1.0E-16 T 29-03-2018 IPR012347 Ferritin-related AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 SUPERFAMILY SSF47240 1 153 6.67E-56 T 29-03-2018 IPR009078 Ferritin-like superfamily AL539_RS10395 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL539_RS12785 1cb11085f861b6eca7f6f159406164de 224 Pfam PF13489 Methyltransferase domain 75 204 1.4E-16 T 29-03-2018 AL539_RS12785 1cb11085f861b6eca7f6f159406164de 224 SUPERFAMILY SSF53335 59 211 3.45E-19 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS12785 1cb11085f861b6eca7f6f159406164de 224 Gene3D G3DSA:3.40.50.150 123 213 8.3E-9 T 29-03-2018 AL539_RS12785 1cb11085f861b6eca7f6f159406164de 224 Gene3D G3DSA:3.40.50.150 47 122 0.0057 T 29-03-2018 AL539_RS01245 01f5c1b130ccabec14c0686d7fa3dda1 443 PIRSF PIRSF006446 1 442 3.2E-174 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS01245 01f5c1b130ccabec14c0686d7fa3dda1 443 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 429 8.9E-156 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS22360 9e5ec41632ba3683efd4b21fa24319cf 151 Gene3D G3DSA:3.90.420.10 16 150 4.8E-17 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL539_RS22360 9e5ec41632ba3683efd4b21fa24319cf 151 SUPERFAMILY SSF56524 29 148 3.01E-12 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.484 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 Gene3D G3DSA:1.20.58.180 217 295 8.4E-33 T 29-03-2018 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 Gene3D G3DSA:3.30.930.10 1 215 6.6E-86 T 29-03-2018 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 3.8E-148 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 2.9E-169 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 SUPERFAMILY SSF55681 8 293 5.36E-133 T 29-03-2018 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS12315 a072cb094ea8a39f132c3fdd9aa17b30 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL539_RS22390 a0094aa19ebd3925b5a85b3f36a5db85 206 SUPERFAMILY SSF52833 3 203 7.27E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS22390 a0094aa19ebd3925b5a85b3f36a5db85 206 Gene3D G3DSA:3.40.30.10 1 206 5.5E-26 T 29-03-2018 AL539_RS22390 a0094aa19ebd3925b5a85b3f36a5db85 206 Pfam PF01323 DSBA-like thioredoxin domain 3 182 2.0E-9 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL539_RS21290 0834a7a2f35326dd4e049d3399147ae9 436 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 412 3.6E-155 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL539_RS21290 0834a7a2f35326dd4e049d3399147ae9 436 SUPERFAMILY SSF51690 129 409 3.92E-86 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL539_RS21290 0834a7a2f35326dd4e049d3399147ae9 436 Gene3D G3DSA:3.20.140.10 4 422 1.8E-92 T 29-03-2018 AL539_RS21290 0834a7a2f35326dd4e049d3399147ae9 436 PIRSF PIRSF000484 1 396 1.4E-66 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL539_RS21290 0834a7a2f35326dd4e049d3399147ae9 436 SUPERFAMILY SSF54675 8 145 4.41E-34 T 29-03-2018 AL539_RS21290 0834a7a2f35326dd4e049d3399147ae9 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 4.0E-80 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL539_RS21290 0834a7a2f35326dd4e049d3399147ae9 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.132 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL539_RS03505 b8ff172bdf4ab949a6e61d011ff4f386 239 SMART SM00382 29 201 5.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03505 b8ff172bdf4ab949a6e61d011ff4f386 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS03505 b8ff172bdf4ab949a6e61d011ff4f386 239 SUPERFAMILY SSF52540 5 216 5.43E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03505 b8ff172bdf4ab949a6e61d011ff4f386 239 Pfam PF00005 ABC transporter 25 165 7.7E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03505 b8ff172bdf4ab949a6e61d011ff4f386 239 Gene3D G3DSA:3.40.50.300 2 236 1.4E-48 T 29-03-2018 AL539_RS02195 85f0d3d33263243544ca1fc7d4fc51d7 324 SUPERFAMILY SSF81901 33 143 2.49E-8 T 29-03-2018 AL539_RS02195 85f0d3d33263243544ca1fc7d4fc51d7 324 SUPERFAMILY SSF46565 268 321 3.66E-13 T 29-03-2018 IPR001623 DnaJ domain AL539_RS02195 85f0d3d33263243544ca1fc7d4fc51d7 324 Gene3D G3DSA:1.10.287.110 249 324 1.4E-8 T 29-03-2018 IPR001623 DnaJ domain AL539_RS13755 dee2c85cc6ee11db506f28f74b2d01de 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 2.2E-25 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 AL539_RS13755 dee2c85cc6ee11db506f28f74b2d01de 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 1.0E-26 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 AL539_RS13755 dee2c85cc6ee11db506f28f74b2d01de 66 Gene3D G3DSA:3.30.1910.10 2 63 4.2E-26 T 29-03-2018 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 SUPERFAMILY SSF51366 23 276 1.18E-82 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 35.197 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 Gene3D G3DSA:3.20.20.70 282 479 1.3E-55 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 30.049 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 Gene3D G3DSA:3.20.20.70 12 279 1.3E-62 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 473 6.1E-58 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 SUPERFAMILY SSF51366 282 477 3.45E-54 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AL539_RS05980 03c62d54298dbab6ba3ccd67d1ebdfc5 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 1.9E-95 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 Gene3D G3DSA:1.25.40.10 30 155 0.0048 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 Gene3D G3DSA:1.10.150.160 296 346 2.1E-5 T 29-03-2018 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 Gene3D G3DSA:3.30.70.270 513 699 2.6E-5 T 29-03-2018 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 SUPERFAMILY SSF48452 176 364 6.5E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 254 287 27.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 174 207 330.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 334 367 31.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 294 327 0.054 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 88 121 3.8 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 SUPERFAMILY SSF48452 336 445 1.86E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 Gene3D G3DSA:1.25.40.10 347 471 3.4E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS15985 583b5d021203bc8ef337a3def0a8cf11 760 Gene3D G3DSA:1.25.40.10 175 295 7.6E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS21825 ed51751ea4bb039ccf72eebbb44feb89 332 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 4.8E-48 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS21825 ed51751ea4bb039ccf72eebbb44feb89 332 PIRSF PIRSF000267 1 332 2.3E-90 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS21825 ed51751ea4bb039ccf72eebbb44feb89 332 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 321 9.0E-94 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS22270 abcc601b0ab129c03ee2d579495ed488 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL539_RS22270 abcc601b0ab129c03ee2d579495ed488 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 6.6E-16 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS22270 abcc601b0ab129c03ee2d579495ed488 161 Gene3D G3DSA:3.10.180.10 1 153 7.5E-29 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS22270 abcc601b0ab129c03ee2d579495ed488 161 SUPERFAMILY SSF54593 1 150 9.93E-29 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS07035 3da6a78c35770ae46f7099dfa1c2d305 163 Pfam PF02674 Colicin V production protein 4 142 2.5E-35 T 29-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AL539_RS18125 304f62f3eb943f95204ee7243a82a123 135 Gene3D G3DSA:1.10.286.20 4 43 3.1E-11 T 29-03-2018 AL539_RS18125 304f62f3eb943f95204ee7243a82a123 135 Pfam PF14760 Rnk N-terminus 6 43 4.2E-12 T 29-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AL539_RS18125 304f62f3eb943f95204ee7243a82a123 135 Gene3D G3DSA:3.10.50.30 45 135 7.8E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS18125 304f62f3eb943f95204ee7243a82a123 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 8.4E-17 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS18125 304f62f3eb943f95204ee7243a82a123 135 PIRSF PIRSF006092 22 127 1.0E-30 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL539_RS18125 304f62f3eb943f95204ee7243a82a123 135 PIRSF PIRSF006092 1 27 8.7 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL539_RS18125 304f62f3eb943f95204ee7243a82a123 135 SUPERFAMILY SSF54534 49 126 7.46E-17 T 29-03-2018 AL539_RS08380 73abb0e283a68ab8f6879b48a089cc51 306 SUPERFAMILY SSF48452 34 286 1.59E-67 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS08380 73abb0e283a68ab8f6879b48a089cc51 306 Gene3D G3DSA:1.25.40.10 19 298 3.0E-37 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS08380 73abb0e283a68ab8f6879b48a089cc51 306 SMART SM00028 100 133 0.0087 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS08380 73abb0e283a68ab8f6879b48a089cc51 306 SMART SM00028 66 99 0.45 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS08380 73abb0e283a68ab8f6879b48a089cc51 306 SMART SM00028 238 271 120.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS08380 73abb0e283a68ab8f6879b48a089cc51 306 SMART SM00028 134 167 110.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS08380 73abb0e283a68ab8f6879b48a089cc51 306 PIRSF PIRSF004654 1 296 2.7E-91 T 29-03-2018 IPR023605 Lipoprotein NlpI AL539_RS05955 3d2b89327bdad32503afd75f8b2ed377 285 SUPERFAMILY SSF89550 165 275 1.16E-55 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL539_RS05955 3d2b89327bdad32503afd75f8b2ed377 285 SUPERFAMILY SSF89550 1 83 1.16E-55 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL539_RS05955 3d2b89327bdad32503afd75f8b2ed377 285 Pfam PF02811 PHP domain 4 181 3.4E-11 T 29-03-2018 IPR004013 PHP domain GO:0003824 AL539_RS05955 3d2b89327bdad32503afd75f8b2ed377 285 SMART SM00481 3 70 3.3E-17 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_RS05955 3d2b89327bdad32503afd75f8b2ed377 285 Gene3D G3DSA:3.20.20.140 1 261 3.2E-47 T 29-03-2018 AL539_RS19015 2fc99be13d8e8d6a57c0ab72aed8cba1 179 Gene3D G3DSA:2.60.40.1180 33 159 3.3E-8 T 29-03-2018 AL539_RS19015 2fc99be13d8e8d6a57c0ab72aed8cba1 179 SUPERFAMILY SSF81901 41 153 6.93E-13 T 29-03-2018 AL539_RS17465 64a694a801d09ef2b4f793e98b9605df 251 Pfam PF02348 Cytidylyltransferase 5 221 2.0E-66 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AL539_RS17465 64a694a801d09ef2b4f793e98b9605df 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 5.5E-119 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL539_RS17465 64a694a801d09ef2b4f793e98b9605df 251 Gene3D G3DSA:3.90.550.10 1 251 2.5E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS17465 64a694a801d09ef2b4f793e98b9605df 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 47.454 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL539_RS17465 64a694a801d09ef2b4f793e98b9605df 251 SUPERFAMILY SSF53448 1 249 4.93E-64 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS21580 2a45234eedf3c72d409f74554c6f0dc0 574 Gene3D G3DSA:1.10.3720.10 30 290 1.2E-34 T 29-03-2018 AL539_RS21580 2a45234eedf3c72d409f74554c6f0dc0 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 2.2E-10 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21580 2a45234eedf3c72d409f74554c6f0dc0 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 558 1.3E-8 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21580 2a45234eedf3c72d409f74554c6f0dc0 574 SUPERFAMILY SSF161098 308 558 9.03E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21580 2a45234eedf3c72d409f74554c6f0dc0 574 Gene3D G3DSA:1.10.3720.10 352 567 8.8E-23 T 29-03-2018 AL539_RS21580 2a45234eedf3c72d409f74554c6f0dc0 574 SUPERFAMILY SSF161098 31 284 9.81E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21580 2a45234eedf3c72d409f74554c6f0dc0 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 3.7E-257 T 29-03-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AL539_RS05820 ce59ea53a970dfa3999e185eb76f9f44 220 SUPERFAMILY SSF48452 88 203 3.52E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS05820 ce59ea53a970dfa3999e185eb76f9f44 220 Gene3D G3DSA:1.25.40.10 75 120 1.9E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS05820 ce59ea53a970dfa3999e185eb76f9f44 220 Gene3D G3DSA:1.25.40.10 139 220 2.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS05820 ce59ea53a970dfa3999e185eb76f9f44 220 Gene3D G3DSA:1.10.287.1110 121 138 0.21 T 29-03-2018 AL539_RS05820 ce59ea53a970dfa3999e185eb76f9f44 220 Pfam PF07719 Tetratricopeptide repeat 98 128 3.5E-5 T 29-03-2018 IPR013105 Tetratricopeptide repeat 2 AL539_RS13375 9c1c94e42e7556994f33e5aa38518a09 174 SUPERFAMILY SSF51161 15 144 1.34E-27 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS13375 9c1c94e42e7556994f33e5aa38518a09 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 53 0.0013 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS13375 9c1c94e42e7556994f33e5aa38518a09 174 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 101 134 2.4E-8 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS13375 9c1c94e42e7556994f33e5aa38518a09 174 Gene3D G3DSA:2.160.10.10 3 174 1.1E-30 T 29-03-2018 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 Gene3D G3DSA:4.10.520.10 1 92 5.2E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 SMART SM00411 1 91 4.4E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.9E-31 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.6E-49 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 SUPERFAMILY SSF47729 1 91 2.5E-30 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS06300 45abfc487e87b19bbb988576a7241553 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.557 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL539_RS00945 777075ea93d63f0fa28641331298d438 182 Gene3D G3DSA:3.90.190.10 12 171 1.1E-4 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL539_RS00945 777075ea93d63f0fa28641331298d438 182 SUPERFAMILY SSF52799 75 122 7.77E-8 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AL539_RS00945 777075ea93d63f0fa28641331298d438 182 Pfam PF00782 Dual specificity phosphatase, catalytic domain 80 127 1.2E-6 T 29-03-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AL539_RS00945 777075ea93d63f0fa28641331298d438 182 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 99 109 - T 29-03-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AL539_RS01780 dc69f4a57abccdd239c13c7480604b61 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.1E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS01780 dc69f4a57abccdd239c13c7480604b61 320 SUPERFAMILY SSF161098 69 137 2.94E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS01780 dc69f4a57abccdd239c13c7480604b61 320 SUPERFAMILY SSF161098 177 298 2.94E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS01780 dc69f4a57abccdd239c13c7480604b61 320 Gene3D G3DSA:1.10.3720.10 4 302 8.7E-39 T 29-03-2018 AL539_RS20850 ef5473e9fcae3f67e2eda8a88a152b6a 223 Gene3D G3DSA:2.60.120.10 3 114 6.0E-23 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS20850 ef5473e9fcae3f67e2eda8a88a152b6a 223 Gene3D G3DSA:2.60.120.10 115 221 1.6E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS20850 ef5473e9fcae3f67e2eda8a88a152b6a 223 Pfam PF12973 ChrR Cupin-like domain 18 108 1.4E-40 T 29-03-2018 IPR025979 ChrR-like cupin domain AL539_RS20850 ef5473e9fcae3f67e2eda8a88a152b6a 223 Pfam PF12973 ChrR Cupin-like domain 127 211 2.3E-28 T 29-03-2018 IPR025979 ChrR-like cupin domain AL539_RS20850 ef5473e9fcae3f67e2eda8a88a152b6a 223 SUPERFAMILY SSF51182 116 216 1.22E-23 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS20850 ef5473e9fcae3f67e2eda8a88a152b6a 223 SUPERFAMILY SSF51182 2 127 2.11E-36 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS03210 994b01c733959dee747fe3441e9b3077 447 Pfam PF03616 Sodium/glutamate symporter 8 350 2.8E-13 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL539_RS00895 ddd64d3124ad1b381f78433617deae67 101 SMART SM00530 33 88 1.8E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS00895 ddd64d3124ad1b381f78433617deae67 101 SUPERFAMILY SSF47413 21 95 3.1E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS00895 ddd64d3124ad1b381f78433617deae67 101 Gene3D G3DSA:3.30.1190.10 52 98 4.0E-11 T 29-03-2018 AL539_RS00895 ddd64d3124ad1b381f78433617deae67 101 Pfam PF13744 Helix-turn-helix domain 15 90 2.1E-12 T 29-03-2018 AL539_RS00895 ddd64d3124ad1b381f78433617deae67 101 Gene3D G3DSA:1.10.10.10 17 51 8.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13005 1ed660a89834ce60a2beb0c35ab89d3b 469 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 451 2.4E-126 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL539_RS13005 1ed660a89834ce60a2beb0c35ab89d3b 469 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 369 389 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL539_RS13005 1ed660a89834ce60a2beb0c35ab89d3b 469 TIGRFAM TIGR03173 pbuX: xanthine permease 34 453 1.2E-130 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AL539_RS13005 1ed660a89834ce60a2beb0c35ab89d3b 469 Pfam PF00860 Permease family 29 421 1.9E-97 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS20045 f43d2b396061449dc13b5ec05849e34d 1563 SUPERFAMILY SSF103088 627 730 6.02E-17 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS20045 f43d2b396061449dc13b5ec05849e34d 1563 Gene3D G3DSA:3.30.1330.60 607 744 5.5E-17 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS20045 f43d2b396061449dc13b5ec05849e34d 1563 Pfam PF00691 OmpA family 630 692 4.4E-8 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS20045 f43d2b396061449dc13b5ec05849e34d 1563 PRINTS PR01021 OMPA domain signature 660 675 8.0E-5 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS20045 f43d2b396061449dc13b5ec05849e34d 1563 PRINTS PR01021 OMPA domain signature 675 691 8.0E-5 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS20045 f43d2b396061449dc13b5ec05849e34d 1563 PRINTS PR01021 OMPA domain signature 630 652 8.0E-5 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 1.3E-112 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 252 2.0E-16 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 5.7E-29 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 Gene3D G3DSA:3.40.50.620 119 218 3.7E-24 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.6E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.6E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.6E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.6E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.6E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 SUPERFAMILY SSF52374 4 280 3.75E-86 T 29-03-2018 AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 Gene3D G3DSA:3.40.50.620 1 118 2.2E-33 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS08640 572a8cc3d6bb6a42a9866c1b4bb2a8a6 287 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.269 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AL539_RS03820 80845d1292a488317d579da85156dbaf 393 Pfam PF08495 FIST N domain 32 221 1.5E-22 T 29-03-2018 IPR013702 FIST domain, N-terminal AL539_RS03820 80845d1292a488317d579da85156dbaf 393 Pfam PF10442 FIST C domain 223 369 5.6E-19 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL539_RS03820 80845d1292a488317d579da85156dbaf 393 SMART SM01204 223 370 2.1E-27 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL539_RS03820 80845d1292a488317d579da85156dbaf 393 SMART SM00897 27 222 3.1E-32 T 29-03-2018 IPR013702 FIST domain, N-terminal AL539_RS17000 5e980132d6c8cfe3f5bd9820a01c3318 571 Pfam PF00535 Glycosyl transferase family 2 11 131 1.4E-17 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL539_RS17000 5e980132d6c8cfe3f5bd9820a01c3318 571 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 264 560 1.8E-14 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS17000 5e980132d6c8cfe3f5bd9820a01c3318 571 Gene3D G3DSA:3.90.550.10 10 327 3.4E-23 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS17000 5e980132d6c8cfe3f5bd9820a01c3318 571 SUPERFAMILY SSF53448 11 240 5.53E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS14910 31191c394f3e2475656430d4e5787ecd 380 SMART SM01154 41 380 6.2E-157 T 29-03-2018 IPR012548 Protein of unknown function DUF1704 AL539_RS14910 31191c394f3e2475656430d4e5787ecd 380 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 16 373 1.1E-131 T 29-03-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA AL539_RS14910 31191c394f3e2475656430d4e5787ecd 380 Pfam PF08014 Domain of unknown function (DUF1704) 42 378 6.4E-114 T 29-03-2018 IPR012548 Protein of unknown function DUF1704 AL539_RS04755 64d0f4365bb32e3d57771265db3ffb5a 181 SUPERFAMILY SSF55729 3 174 9.08E-51 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS04755 64d0f4365bb32e3d57771265db3ffb5a 181 Gene3D G3DSA:3.40.630.30 2 180 1.9E-33 T 29-03-2018 AL539_RS04755 64d0f4365bb32e3d57771265db3ffb5a 181 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 1.3E-32 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS17790 945c63c289f698f515339ba68eb2aae8 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.0E-108 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS17790 945c63c289f698f515339ba68eb2aae8 378 PIRSF PIRSF000267 2 377 5.6E-123 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS17790 945c63c289f698f515339ba68eb2aae8 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.4E-171 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS13470 cbfb637a59dbca46651a884951e3019f 143 Pfam PF10980 Protein of unknown function (DUF2787) 14 138 2.9E-33 T 29-03-2018 IPR021248 Protein of unknown function DUF2787 AL539_RS12030 e237f1efd80664274b675dd658becda7 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 2.2E-115 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL539_RS12030 e237f1efd80664274b675dd658becda7 481 Pfam PF02386 Cation transport protein 51 475 2.2E-48 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL539_RS12030 e237f1efd80664274b675dd658becda7 481 PIRSF PIRSF006247 1 481 3.4E-166 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 SUPERFAMILY SSF52540 20 326 5.34E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 Gene3D G3DSA:3.40.50.300 3 151 5.9E-20 T 29-03-2018 AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 Pfam PF00271 Helicase conserved C-terminal domain 200 314 1.7E-15 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 SMART SM00487 1 174 4.1E-14 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 Pfam PF00270 DEAD/DEAH box helicase 20 152 5.7E-9 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 Pfam PF04408 Helicase associated domain (HA2) 375 439 9.6E-6 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 Gene3D G3DSA:3.40.50.300 168 333 8.6E-39 T 29-03-2018 AL539_RS02165 dfa432a32dbd32a5a479b17bbc734c1b 784 SMART SM00490 219 315 2.1E-14 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS12075 8f5685adf1d1f4a975292b3445c15223 292 Pfam PF01553 Acyltransferase 72 226 2.8E-15 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS12075 8f5685adf1d1f4a975292b3445c15223 292 Gene3D G3DSA:3.40.1130.10 38 258 1.4E-23 T 29-03-2018 AL539_RS12075 8f5685adf1d1f4a975292b3445c15223 292 SMART SM00563 85 227 6.6E-19 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS12075 8f5685adf1d1f4a975292b3445c15223 292 SUPERFAMILY SSF69593 43 288 4.32E-27 T 29-03-2018 AL539_RS06420 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL539_RS06420 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL539_RS06420 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 77 5.8E-28 T 29-03-2018 AL539_RS06420 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL539_RS06420 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AL539_RS06420 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL539_RS19910 ab78f48724e210e823fbf86d2be697e9 378 Pfam PF07690 Major Facilitator Superfamily 19 342 1.2E-41 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS19910 ab78f48724e210e823fbf86d2be697e9 378 PRINTS PR01035 Tetracycline resistance protein signature 127 149 8.6E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS19910 ab78f48724e210e823fbf86d2be697e9 378 PRINTS PR01035 Tetracycline resistance protein signature 4 20 8.6E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS19910 ab78f48724e210e823fbf86d2be697e9 378 PRINTS PR01035 Tetracycline resistance protein signature 294 314 8.6E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS19910 ab78f48724e210e823fbf86d2be697e9 378 SUPERFAMILY SSF103473 6 369 2.49E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS19910 ab78f48724e210e823fbf86d2be697e9 378 Gene3D G3DSA:1.20.1250.20 191 370 4.4E-9 T 29-03-2018 AL539_RS19910 ab78f48724e210e823fbf86d2be697e9 378 Gene3D G3DSA:1.20.1250.20 2 190 9.0E-33 T 29-03-2018 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 SUPERFAMILY SSF46785 19 87 8.17E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 Gene3D G3DSA:3.40.640.10 153 371 2.4E-37 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 Pfam PF00155 Aminotransferase class I and II 147 442 3.9E-28 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 SUPERFAMILY SSF53383 116 477 5.69E-80 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 SMART SM00345 27 86 1.9E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 Gene3D G3DSA:3.90.1150.10 372 480 4.7E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.6E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.6E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 86 4.8E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS20565 7caf03b45520ea283b1e74eb929c2b3d 481 Gene3D G3DSA:1.10.10.10 14 88 2.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08400 35b0381e91cd2d1c1585aa008c4eae50 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 29-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AL539_RS08400 35b0381e91cd2d1c1585aa008c4eae50 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 9.0E-47 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL539_RS08400 35b0381e91cd2d1c1585aa008c4eae50 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 6.1E-35 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL539_RS08400 35b0381e91cd2d1c1585aa008c4eae50 131 SUPERFAMILY SSF89919 2 105 3.4E-32 T 29-03-2018 IPR023799 Ribosome-binding factor A domain AL539_RS08400 35b0381e91cd2d1c1585aa008c4eae50 131 Gene3D G3DSA:3.30.300.20 5 118 2.4E-33 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS08400 35b0381e91cd2d1c1585aa008c4eae50 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.326 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL539_RS08400 35b0381e91cd2d1c1585aa008c4eae50 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.3E-30 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL539_RS09350 dfd27c493a620cc1166c67c7d90fdac2 641 Pfam PF13245 AAA domain 34 251 2.7E-15 T 29-03-2018 AL539_RS09350 dfd27c493a620cc1166c67c7d90fdac2 641 Gene3D G3DSA:3.40.50.300 274 637 5.4E-22 T 29-03-2018 AL539_RS09350 dfd27c493a620cc1166c67c7d90fdac2 641 Gene3D G3DSA:3.40.50.300 22 273 5.6E-25 T 29-03-2018 AL539_RS09350 dfd27c493a620cc1166c67c7d90fdac2 641 SUPERFAMILY SSF52540 32 382 1.13E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09350 dfd27c493a620cc1166c67c7d90fdac2 641 SUPERFAMILY SSF52540 593 617 1.13E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09350 dfd27c493a620cc1166c67c7d90fdac2 641 SUPERFAMILY SSF52540 454 561 1.13E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 2.4E-148 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 1.7E-14 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 Gene3D G3DSA:3.20.20.80 1 462 2.1E-149 T 29-03-2018 AL539_RS21880 fcda40bc9bb76f552614f503210b09a8 463 SUPERFAMILY SSF51445 1 455 2.5E-158 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS03595 8051f4c1fba22780864d466b1f5ba18f 300 Pfam PF15575 Immunity protein 49 71 284 8.2E-40 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 9.4E-26 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 4.0E-51 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 SUPERFAMILY SSF56645 1 240 7.46E-82 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 SUPERFAMILY SSF47203 225 379 5.8E-61 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 Gene3D G3DSA:1.10.540.10 1 119 5.0E-35 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 Gene3D G3DSA:1.20.140.10 216 384 2.4E-62 T 29-03-2018 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 Gene3D G3DSA:2.40.110.10 120 215 6.0E-38 T 29-03-2018 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 PIRSF PIRSF016578 208 382 4.9E-14 T 29-03-2018 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 PIRSF PIRSF016578 3 193 1.6E-10 T 29-03-2018 AL539_RS25730 45300ebaede5e183269baa67316175a0 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.5E-29 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 170.586 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 3.7E-147 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 Gene3D G3DSA:3.30.420.40 5 195 8.3E-67 T 29-03-2018 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 Gene3D G3DSA:3.30.420.40 196 397 2.9E-72 T 29-03-2018 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 PRINTS PR00471 Acetate kinase family signature 173 186 7.6E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 PRINTS PR00471 Acetate kinase family signature 378 390 7.6E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 PRINTS PR00471 Acetate kinase family signature 299 312 7.6E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 PRINTS PR00471 Acetate kinase family signature 203 224 7.6E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 PRINTS PR00471 Acetate kinase family signature 6 17 7.6E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 PRINTS PR00471 Acetate kinase family signature 321 337 7.6E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 SUPERFAMILY SSF53067 158 396 6.2E-83 T 29-03-2018 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 SUPERFAMILY SSF53067 5 196 1.55E-63 T 29-03-2018 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 Pfam PF00871 Acetokinase family 6 391 4.3E-143 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS25570 586f823e9c5f5940f25537ab0783381c 397 PIRSF PIRSF000722 2 397 2.7E-134 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06490 ab21ab50d256b94cf8486c9dbc545ecb 201 PIRSF PIRSF015617 6 201 3.5E-65 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AL539_RS06490 ab21ab50d256b94cf8486c9dbc545ecb 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 29-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AL539_RS06490 ab21ab50d256b94cf8486c9dbc545ecb 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 7.5E-68 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AL539_RS06490 ab21ab50d256b94cf8486c9dbc545ecb 201 SUPERFAMILY SSF52540 12 201 1.06E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06490 ab21ab50d256b94cf8486c9dbc545ecb 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 2.6E-57 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AL539_RS06490 ab21ab50d256b94cf8486c9dbc545ecb 201 Gene3D G3DSA:3.40.50.300 11 201 2.2E-67 T 29-03-2018 AL539_RS13320 12a948c9dff5727ab783e836fe4b5a7a 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 6.7E-158 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL539_RS13320 12a948c9dff5727ab783e836fe4b5a7a 295 SUPERFAMILY SSF53448 1 287 5.18E-93 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS13320 12a948c9dff5727ab783e836fe4b5a7a 295 Pfam PF00483 Nucleotidyl transferase 2 238 1.6E-72 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL539_RS13320 12a948c9dff5727ab783e836fe4b5a7a 295 Gene3D G3DSA:3.90.550.10 1 295 7.8E-74 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS10850 409493b1838313086a84f6745fa82fa6 340 Gene3D G3DSA:3.20.20.70 99 325 1.3E-17 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS10850 409493b1838313086a84f6745fa82fa6 340 Pfam PF13353 4Fe-4S single cluster domain 115 182 4.4E-7 T 29-03-2018 AL539_RS10850 409493b1838313086a84f6745fa82fa6 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.2E-155 T 29-03-2018 IPR022462 Lysine-2,3-aminomutase-like AL539_RS10850 409493b1838313086a84f6745fa82fa6 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 1.2E-128 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL539_RS10850 409493b1838313086a84f6745fa82fa6 340 PIRSF PIRSF004911 3 340 3.4E-117 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL539_RS10850 409493b1838313086a84f6745fa82fa6 340 Pfam PF04055 Radical SAM superfamily 117 280 1.1E-8 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS10850 409493b1838313086a84f6745fa82fa6 340 SUPERFAMILY SSF102114 102 324 1.83E-26 T 29-03-2018 AL539_RS05430 277fc3052f55919a095e5180db7d6dfe 164 Pfam PF13302 Acetyltransferase (GNAT) domain 64 142 1.3E-7 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS05430 277fc3052f55919a095e5180db7d6dfe 164 Gene3D G3DSA:3.40.630.30 1 163 1.9E-13 T 29-03-2018 AL539_RS05430 277fc3052f55919a095e5180db7d6dfe 164 SUPERFAMILY SSF55729 61 146 1.78E-14 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS06855 4a1784de2228093f633f432a89047762 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.3E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.3E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.3E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 Pfam PF00106 short chain dehydrogenase 3 190 2.4E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 SUPERFAMILY SSF51735 3 229 4.45E-78 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06855 4a1784de2228093f633f432a89047762 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.0E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06855 4a1784de2228093f633f432a89047762 229 Gene3D G3DSA:3.40.50.720 2 229 5.4E-49 T 29-03-2018 AL539_RS03350 71109fa06f769c439259528d13862a61 491 Pfam PF01943 Polysaccharide biosynthesis protein 22 283 1.8E-11 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL539_RS22295 854cf298946904a59344af24bf7cc764 341 Gene3D G3DSA:1.20.1600.10 27 336 2.6E-29 T 29-03-2018 AL539_RS22295 854cf298946904a59344af24bf7cc764 341 SUPERFAMILY SSF111369 52 122 2.09E-8 T 29-03-2018 AL539_RS22295 854cf298946904a59344af24bf7cc764 341 SUPERFAMILY SSF111369 185 264 2.48E-11 T 29-03-2018 AL539_RS22295 854cf298946904a59344af24bf7cc764 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 284 7.0E-14 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS22295 854cf298946904a59344af24bf7cc764 341 SUPERFAMILY SSF111369 119 173 6.15E-6 T 29-03-2018 AL539_RS06035 68cf8aac7b5c60887b936d695ff56f83 131 Gene3D G3DSA:3.10.129.10 1 131 2.9E-34 T 29-03-2018 AL539_RS06035 68cf8aac7b5c60887b936d695ff56f83 131 SUPERFAMILY SSF54637 9 129 2.64E-38 T 29-03-2018 IPR029069 HotDog domain AL539_RS06035 68cf8aac7b5c60887b936d695ff56f83 131 Pfam PF03061 Thioesterase superfamily 26 97 2.1E-19 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL539_RS10070 61fee157a08a379570cd8fe93e311e5c 214 SMART SM00421 151 208 2.1E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10070 61fee157a08a379570cd8fe93e311e5c 214 Gene3D G3DSA:1.10.10.10 114 213 1.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10070 61fee157a08a379570cd8fe93e311e5c 214 SUPERFAMILY SSF46894 141 210 1.94E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS10070 61fee157a08a379570cd8fe93e311e5c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10070 61fee157a08a379570cd8fe93e311e5c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10070 61fee157a08a379570cd8fe93e311e5c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10070 61fee157a08a379570cd8fe93e311e5c 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 5.3E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS03265 b84661cc905627279fe4f0a59e7ca80b 146 Pfam PF05099 Tellurite resistance protein TerB 19 143 1.6E-38 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AL539_RS03265 b84661cc905627279fe4f0a59e7ca80b 146 SUPERFAMILY SSF158682 1 144 1.57E-28 T 29-03-2018 AL539_RS03265 b84661cc905627279fe4f0a59e7ca80b 146 Gene3D G3DSA:1.10.3680.10 6 146 7.5E-32 T 29-03-2018 IPR029024 TerB-like AL539_RS05425 cc6d19a609ab0ed121454b3cb72e8a2b 169 Gene3D G3DSA:3.40.50.300 1 151 9.1E-14 T 29-03-2018 AL539_RS05425 cc6d19a609ab0ed121454b3cb72e8a2b 169 SUPERFAMILY SSF52540 2 127 1.08E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08515 4b76fa4f32ce8d204c19730b2674cdff 361 Pfam PF01594 AI-2E family transporter 14 347 1.6E-51 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AL539_RS17925 1ba126c0d7beb456e168a085c67b52a7 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 6.1E-197 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AL539_RS17925 1ba126c0d7beb456e168a085c67b52a7 607 Pfam PF05947 Type VI secretion system, TssF 6 605 1.2E-177 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AL539_RS17925 1ba126c0d7beb456e168a085c67b52a7 607 PIRSF PIRSF028304 1 606 1.7E-153 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AL539_RS18000 56f1ba868c8f6ef4db0a684ff53cad5a 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS18000 56f1ba868c8f6ef4db0a684ff53cad5a 171 SUPERFAMILY SSF55811 2 169 5.42E-44 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS18000 56f1ba868c8f6ef4db0a684ff53cad5a 171 Pfam PF00293 NUDIX domain 32 147 3.6E-16 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS18000 56f1ba868c8f6ef4db0a684ff53cad5a 171 Gene3D G3DSA:3.90.79.10 1 168 2.8E-35 T 29-03-2018 AL539_RS18800 6206954b07ac6df7967b000b82251490 265 SUPERFAMILY SSF161098 60 245 1.28E-45 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS18800 6206954b07ac6df7967b000b82251490 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 5.6E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS18800 6206954b07ac6df7967b000b82251490 265 Gene3D G3DSA:1.10.3720.10 5 264 2.8E-44 T 29-03-2018 AL539_RS18800 6206954b07ac6df7967b000b82251490 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 2.5E-26 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 SUPERFAMILY SSF55073 160 320 1.88E-42 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 SUPERFAMILY SSF52172 10 160 2.85E-37 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 Gene3D G3DSA:3.30.70.270 157 322 2.1E-45 T 29-03-2018 AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 316 5.2E-41 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 SMART SM00267 144 320 1.2E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 Gene3D G3DSA:3.40.50.2300 9 156 1.6E-35 T 29-03-2018 AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 Pfam PF00072 Response regulator receiver domain 14 121 1.2E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 319 8.3E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS18385 ad21cdbbc41ff4a1aa8ec9aa54979867 323 SMART SM00448 12 124 5.9E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS15760 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF100934 534 606 1.8E-5 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL539_RS15760 48a33f65768c75615baea13001110efc 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.053 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AL539_RS15760 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF53067 186 381 4.2E-65 T 29-03-2018 AL539_RS15760 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:3.30.420.40 196 364 4.7E-44 T 29-03-2018 AL539_RS15760 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:2.60.34.10 389 531 6.0E-64 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF100920 383 539 4.05E-60 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF53067 1 182 9.46E-65 T 29-03-2018 AL539_RS15760 48a33f65768c75615baea13001110efc 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 5.8E-284 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AL539_RS15760 48a33f65768c75615baea13001110efc 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 2.1E-78 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 Pfam PF00012 Hsp70 protein 4 601 9.8E-261 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL539_RS15760 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:1.20.1270.10 532 617 7.5E-20 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AL539_RS15760 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:3.30.420.40 1 195 1.3E-78 T 29-03-2018 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 Pfam PF01687 Riboflavin kinase 184 306 4.9E-39 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 SMART SM00904 183 307 4.2E-64 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 PIRSF PIRSF004491 1 311 4.1E-108 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 Gene3D G3DSA:2.40.30.30 180 310 3.7E-41 T 29-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 6.0E-109 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 SUPERFAMILY SSF52374 15 175 1.89E-36 T 29-03-2018 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 Gene3D G3DSA:3.40.50.620 1 179 1.5E-50 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 Pfam PF06574 FAD synthetase 13 167 2.2E-59 T 29-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 56 7.5E-9 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS14940 24073bdfd93b69858ee79619850a8cc5 311 SUPERFAMILY SSF82114 174 309 2.4E-45 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL539_RS10765 4117149bd13656ff31bcaf3217a60195 295 Pfam PF00892 EamA-like transporter family 157 294 5.4E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS10765 4117149bd13656ff31bcaf3217a60195 295 Pfam PF00892 EamA-like transporter family 4 135 3.7E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS10765 4117149bd13656ff31bcaf3217a60195 295 SUPERFAMILY SSF103481 207 293 2.62E-10 T 29-03-2018 AL539_RS10765 4117149bd13656ff31bcaf3217a60195 295 SUPERFAMILY SSF103481 36 140 2.88E-12 T 29-03-2018 AL539_RS19110 b7ba62e81b7b451f99481d40c1552a4b 190 Pfam PF13302 Acetyltransferase (GNAT) domain 24 163 3.2E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS19110 b7ba62e81b7b451f99481d40c1552a4b 190 SUPERFAMILY SSF55729 22 165 7.85E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS19110 b7ba62e81b7b451f99481d40c1552a4b 190 Gene3D G3DSA:3.40.630.30 15 188 1.1E-16 T 29-03-2018 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 Pfam PF01343 Peptidase family S49 391 541 3.6E-46 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 Pfam PF01343 Peptidase family S49 138 294 1.0E-30 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 1.5E-52 T 29-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 Gene3D G3DSA:3.40.1750.10 186 291 4.5E-20 T 29-03-2018 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 Gene3D G3DSA:3.40.50.261 84 155 0.052 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 PIRSF PIRSF001217 8 616 2.5E-228 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 Gene3D G3DSA:3.90.226.10 319 611 1.2E-51 T 29-03-2018 AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 SUPERFAMILY SSF52096 209 284 9.94E-30 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 SUPERFAMILY SSF52096 53 178 9.94E-30 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 SUPERFAMILY SSF52096 315 439 2.69E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 SUPERFAMILY SSF52096 467 529 2.69E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS06885 bdaa062e326e00564438fd23beefd619 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 3.2E-193 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL539_RS15215 f2d82b5e488ad265c1a52d47bcfc1120 247 SUPERFAMILY SSF110395 4 247 1.57E-74 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL539_RS15215 f2d82b5e488ad265c1a52d47bcfc1120 247 Pfam PF03932 CutC family 4 205 2.4E-81 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL539_RS15215 f2d82b5e488ad265c1a52d47bcfc1120 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 41.306 T 29-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL539_RS15215 f2d82b5e488ad265c1a52d47bcfc1120 247 Gene3D G3DSA:3.20.20.380 2 247 7.4E-90 T 29-03-2018 AL539_RS14930 83151c744029396f73fa497014920730 86 SUPERFAMILY SSF46992 3 86 1.1E-32 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS14930 83151c744029396f73fa497014920730 86 Pfam PF01649 Ribosomal protein S20 2 84 5.4E-28 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS14930 83151c744029396f73fa497014920730 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.696 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS14930 83151c744029396f73fa497014920730 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS14930 83151c744029396f73fa497014920730 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.9E-32 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS14930 83151c744029396f73fa497014920730 86 Gene3D G3DSA:1.20.58.110 1 86 8.0E-30 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS02290 7e683f6eface63618f4f99cebb6bb589 269 SMART SM00530 12 66 0.0013 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS02290 7e683f6eface63618f4f99cebb6bb589 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 8.2E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS02290 7e683f6eface63618f4f99cebb6bb589 269 SUPERFAMILY SSF47413 6 71 1.19E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS02290 7e683f6eface63618f4f99cebb6bb589 269 Gene3D G3DSA:1.10.10.10 100 166 0.08 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02290 7e683f6eface63618f4f99cebb6bb589 269 Gene3D G3DSA:1.10.260.40 4 77 6.3E-9 T 29-03-2018 AL539_RS11200 6d35316e65a8d95859d7353871fd62c2 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.085 T 29-03-2018 IPR022973 Ribosomal protein L10 AL539_RS11200 6d35316e65a8d95859d7353871fd62c2 164 Pfam PF00466 Ribosomal protein L10 5 101 7.2E-27 T 29-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AL539_RS11200 6d35316e65a8d95859d7353871fd62c2 164 Gene3D G3DSA:3.40.50.720 1 105 5.4E-4 T 29-03-2018 AL539_RS11200 6d35316e65a8d95859d7353871fd62c2 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 29-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS11200 6d35316e65a8d95859d7353871fd62c2 164 SUPERFAMILY SSF160369 4 158 1.44E-44 T 29-03-2018 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 SMART SM00448 2 115 9.8E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 SMART SM00421 143 200 3.0E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 SUPERFAMILY SSF52172 3 131 2.85E-33 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 3.7E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 SUPERFAMILY SSF46894 131 202 1.87E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 Pfam PF00072 Response regulator receiver domain 4 115 3.4E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 4.6E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 4.6E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 4.6E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 Gene3D G3DSA:1.10.10.10 127 204 8.4E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20345 4d80e60b18ca55c2398cfe347213fb1b 208 Gene3D G3DSA:3.40.50.2300 1 126 3.3E-34 T 29-03-2018 AL539_RS00810 5da86c4e138b0f1f9a1f2d4f4922c573 272 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 15 189 5.0E-25 T 29-03-2018 IPR010183 Bacteriophage lambda, Bet AL539_RS00810 5da86c4e138b0f1f9a1f2d4f4922c573 272 Pfam PF03837 RecT family 38 193 4.6E-23 T 29-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 AL539_RS08785 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.03 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08785 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08785 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 1.2E-23 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08785 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 29-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS08785 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 79 6.6E-32 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08785 19aaa7b972ebbb60be8854dfb6662233 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.8E-27 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Gene3D G3DSA:3.40.50.2300 717 887 2.0E-42 T 29-03-2018 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SUPERFAMILY SSF158472 378 429 2.09E-9 T 29-03-2018 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Gene3D G3DSA:3.30.450.20 238 356 4.6E-8 T 29-03-2018 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Gene3D G3DSA:3.30.565.10 531 693 2.6E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Gene3D G3DSA:1.10.287.130 449 523 1.2E-17 T 29-03-2018 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SUPERFAMILY SSF47384 444 527 1.24E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 9.3E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SUPERFAMILY SSF55785 860 927 3.84E-8 T 29-03-2018 IPR000014 PAS domain AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Gene3D G3DSA:3.30.450.20 124 237 0.0032 T 29-03-2018 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SMART SM00388 459 527 2.8E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SMART SM00448 722 835 3.3E-44 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Gene3D G3DSA:3.30.450.20 888 1115 1.7E-8 T 29-03-2018 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SMART SM00387 573 684 2.2E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SMART SM00091 873 938 1.2E-5 T 29-03-2018 IPR000014 PAS domain AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.0E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 1.1E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SMART SM00304 377 430 7.4E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SUPERFAMILY SSF55874 516 687 5.37E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Pfam PF00989 PAS fold 876 924 5.7E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 SUPERFAMILY SSF52172 718 843 1.18E-40 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS08525 6acb667c468b2985648e6ce9c4a3ccd5 1128 Pfam PF00672 HAMP domain 379 427 8.1E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS09015 469031da486311a22adf252186311af9 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 8.9E-23 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL539_RS09015 469031da486311a22adf252186311af9 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 1.0E-36 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL539_RS09015 469031da486311a22adf252186311af9 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.261 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL539_RS09015 469031da486311a22adf252186311af9 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 1.9E-31 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL539_RS09015 469031da486311a22adf252186311af9 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 2.4E-43 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AL539_RS09015 469031da486311a22adf252186311af9 126 SUPERFAMILY SSF56214 3 125 4.97E-31 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL539_RS09015 469031da486311a22adf252186311af9 126 Gene3D G3DSA:3.90.470.20 1 126 1.3E-38 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AL539_RS25155 7ad42cff801b5465a532ebfe87a262c5 474 Pfam PF02321 Outer membrane efflux protein 242 430 5.2E-34 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS25155 7ad42cff801b5465a532ebfe87a262c5 474 Pfam PF02321 Outer membrane efflux protein 28 213 3.0E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS25155 7ad42cff801b5465a532ebfe87a262c5 474 Gene3D G3DSA:1.20.1600.10 19 436 1.1E-61 T 29-03-2018 AL539_RS25155 7ad42cff801b5465a532ebfe87a262c5 474 SUPERFAMILY SSF56954 3 432 9.81E-72 T 29-03-2018 AL539_RS10830 2e77446d68474e830ab1e9975649be88 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.6E-49 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL539_RS10830 2e77446d68474e830ab1e9975649be88 127 Gene3D G3DSA:1.20.1300.10 2 127 8.3E-52 T 29-03-2018 AL539_RS10830 2e77446d68474e830ab1e9975649be88 127 PIRSF PIRSF000180 1 127 2.1E-57 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL539_RS10830 2e77446d68474e830ab1e9975649be88 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-52 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL539_RS10830 2e77446d68474e830ab1e9975649be88 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL539_RS10830 2e77446d68474e830ab1e9975649be88 127 SUPERFAMILY SSF81343 1 127 1.02E-52 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS13665 52c34768c316555be8df2001ef32396e 206 SUPERFAMILY SSF54534 7 205 1.18E-53 T 29-03-2018 AL539_RS13665 52c34768c316555be8df2001ef32396e 206 Gene3D G3DSA:1.10.287.460 1 89 2.7E-20 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL539_RS13665 52c34768c316555be8df2001ef32396e 206 Gene3D G3DSA:3.10.50.40 90 206 1.3E-39 T 29-03-2018 AL539_RS13665 52c34768c316555be8df2001ef32396e 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.7E-23 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL539_RS13665 52c34768c316555be8df2001ef32396e 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.4E-26 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL539_RS17495 848802b42868732a4b2d93af10a23aa3 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 10 205 3.0E-9 T 29-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 AL539_RS05495 5505ccd4b152f1ed0f67939f48f52ba4 97 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 14 78 5.4E-17 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS05495 5505ccd4b152f1ed0f67939f48f52ba4 97 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 16 67 2.6E-13 T 29-03-2018 AL539_RS05495 5505ccd4b152f1ed0f67939f48f52ba4 97 Gene3D G3DSA:3.40.1620.10 13 70 1.4E-13 T 29-03-2018 AL539_RS05495 5505ccd4b152f1ed0f67939f48f52ba4 97 SUPERFAMILY SSF143120 14 85 2.75E-17 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS25765 de760169c6054064b7c79024dee00a99 200 SUPERFAMILY SSF81452 7 198 3.53E-59 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25765 de760169c6054064b7c79024dee00a99 200 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 21 200 7.8E-84 T 29-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AL539_RS25765 de760169c6054064b7c79024dee00a99 200 Gene3D G3DSA:1.20.120.80 15 200 1.6E-52 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25765 de760169c6054064b7c79024dee00a99 200 Pfam PF00510 Cytochrome c oxidase subunit III 17 198 6.3E-17 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS09030 43634dd4254772181960bb275cf1f381 320 SUPERFAMILY SSF54814 200 316 2.75E-41 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AL539_RS09030 43634dd4254772181960bb275cf1f381 320 Gene3D G3DSA:3.30.300.20 205 319 7.7E-42 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS09030 43634dd4254772181960bb275cf1f381 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS09030 43634dd4254772181960bb275cf1f381 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS09030 43634dd4254772181960bb275cf1f381 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.5E-110 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS09030 43634dd4254772181960bb275cf1f381 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.738 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS09030 43634dd4254772181960bb275cf1f381 320 SUPERFAMILY SSF52540 29 224 8.64E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09030 43634dd4254772181960bb275cf1f381 320 Gene3D G3DSA:3.40.50.300 20 204 3.8E-34 T 29-03-2018 AL539_RS09030 43634dd4254772181960bb275cf1f381 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 3.2E-39 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 6.9E-4 T 29-03-2018 AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 SUPERFAMILY SSF51735 4 238 1.71E-80 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 1.6E-61 T 29-03-2018 AL539_RS20830 efe7287cf26563c92c8f81e88e698c12 239 Gene3D G3DSA:3.40.50.720 4 239 3.4E-75 T 29-03-2018 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 SUPERFAMILY SSF50447 262 393 3.53E-27 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.6E-19 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 SUPERFAMILY SSF52540 10 277 7.5E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 SUPERFAMILY SSF54980 393 468 2.77E-17 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 4.5E-46 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 Gene3D G3DSA:3.30.70.870 388 465 1.7E-10 T 29-03-2018 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 6.8E-298 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 Gene3D G3DSA:2.40.30.10 274 386 2.0E-22 T 29-03-2018 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.1E-7 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 3.3E-46 T 29-03-2018 IPR032090 Peptide chain release factor 3, C-terminal AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 Gene3D G3DSA:3.40.50.300 9 273 1.4E-33 T 29-03-2018 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS08320 28599caf4369513035d39a9bdb86b22f 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.682 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL539_RS13575 98717f215155676eca4114be3006e924 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 29-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13575 98717f215155676eca4114be3006e924 123 SUPERFAMILY SSF50193 2 122 4.19E-51 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL539_RS13575 98717f215155676eca4114be3006e924 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 29-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AL539_RS13575 98717f215155676eca4114be3006e924 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-54 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL539_RS13575 98717f215155676eca4114be3006e924 123 Gene3D G3DSA:2.40.150.20 1 123 1.3E-52 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL539_RS13575 98717f215155676eca4114be3006e924 123 SMART SM01374 1 123 1.3E-85 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL539_RS13575 98717f215155676eca4114be3006e924 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.2 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Gene3D G3DSA:3.40.50.2300 1 122 7.5E-28 T 29-03-2018 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.8E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Pfam PF00072 Response regulator receiver domain 7 120 1.2E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 SMART SM00448 5 119 1.6E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 SUPERFAMILY SSF52172 4 173 1.43E-27 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 SMART SM00421 147 204 5.0E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS10935 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Gene3D G3DSA:1.10.10.10 123 208 4.6E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14670 ac38677db09adcc0ce4e0876047b48a9 317 Pfam PF03186 CobD/Cbib protein 19 286 4.5E-29 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:3.20.20.80 520 848 3.3E-40 T 29-03-2018 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.60.40.10 204 266 0.0073 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.60.40.10 109 159 1.2E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 SMART SM00636 525 827 3.7E-4 T 29-03-2018 IPR011583 Chitinase II GO:0008061 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.40.50.70 77 108 5.3E-13 T 29-03-2018 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.40.50.70 160 203 2.7E-10 T 29-03-2018 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.40.50.70 334 366 1.6E-13 T 29-03-2018 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.40.50.70 412 467 3.0E-7 T 29-03-2018 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 ProSitePatterns PS01095 Chitinases family 18 active site. 639 647 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 SMART SM00495 28 74 5.0E-10 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 SMART SM00495 279 328 2.7E-4 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.10.10.20 13 76 1.4E-12 T 29-03-2018 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.10.10.20 267 333 9.6E-9 T 29-03-2018 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Pfam PF00704 Glycosyl hydrolases family 18 527 827 4.5E-24 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 SUPERFAMILY SSF51055 16 78 3.66E-13 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.60.40.10 367 411 3.4E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS07900 2f62b081dc5a1e09c5b86a8f073f8625 848 SUPERFAMILY SSF51445 524 835 1.11E-47 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS12115 41bcfa5a8bb8a63dc4ca6722e7501fa5 300 Gene3D G3DSA:1.10.10.10 2 84 3.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12115 41bcfa5a8bb8a63dc4ca6722e7501fa5 300 SUPERFAMILY SSF46785 6 87 5.99E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS12115 41bcfa5a8bb8a63dc4ca6722e7501fa5 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.2E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12115 41bcfa5a8bb8a63dc4ca6722e7501fa5 300 SUPERFAMILY SSF53850 89 291 6.03E-24 T 29-03-2018 AL539_RS12115 41bcfa5a8bb8a63dc4ca6722e7501fa5 300 Gene3D G3DSA:3.40.190.10 180 261 2.5E-7 T 29-03-2018 AL539_RS12115 41bcfa5a8bb8a63dc4ca6722e7501fa5 300 Gene3D G3DSA:3.40.190.10 89 179 1.9E-6 T 29-03-2018 AL539_RS12115 41bcfa5a8bb8a63dc4ca6722e7501fa5 300 Pfam PF03466 LysR substrate binding domain 88 287 1.6E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS25895 df108cc0b188a92548175895ed1e73e0 327 SMART SM00861 4 179 8.0E-62 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS25895 df108cc0b188a92548175895ed1e73e0 327 SUPERFAMILY SSF52518 4 191 1.55E-64 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS25895 df108cc0b188a92548175895ed1e73e0 327 SUPERFAMILY SSF52922 190 323 1.28E-37 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS25895 df108cc0b188a92548175895ed1e73e0 327 Gene3D G3DSA:3.40.50.920 196 325 6.3E-32 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AL539_RS25895 df108cc0b188a92548175895ed1e73e0 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 1.9E-48 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_RS25895 df108cc0b188a92548175895ed1e73e0 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 3.1E-36 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AL539_RS25895 df108cc0b188a92548175895ed1e73e0 327 Gene3D G3DSA:3.40.50.970 1 195 7.1E-61 T 29-03-2018 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 Pfam PF00551 Formyl transferase 82 259 4.6E-49 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 Gene3D G3DSA:3.40.50.170 87 277 7.8E-54 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 PIRSF PIRSF036480 1 277 3.8E-112 T 29-03-2018 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 Gene3D G3DSA:3.30.70.260 1 86 1.3E-10 T 29-03-2018 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 SUPERFAMILY SSF55021 4 55 2.33E-8 T 29-03-2018 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.9E-122 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.3E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.3E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.3E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.3E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.3E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.3E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.114 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 Pfam PF01842 ACT domain 5 65 1.2E-6 T 29-03-2018 IPR002912 ACT domain AL539_RS16870 f646f8cb3bab327b6c24e28b66c5a598 277 SUPERFAMILY SSF53328 82 276 1.83E-60 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL539_RS20965 7887909d68114308d3d643b4b8ce5f67 335 Gene3D G3DSA:2.40.50.100 260 328 1.8E-4 T 29-03-2018 AL539_RS20965 7887909d68114308d3d643b4b8ce5f67 335 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 48 328 3.8E-66 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS20965 7887909d68114308d3d643b4b8ce5f67 335 Gene3D G3DSA:3.40.630.10 39 259 4.2E-27 T 29-03-2018 AL539_RS20965 7887909d68114308d3d643b4b8ce5f67 335 TIGRFAM TIGR02994 ectoine_eutE: ectoine utilization protein EutE 2 328 1.5E-143 T 29-03-2018 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB AL539_RS20965 7887909d68114308d3d643b4b8ce5f67 335 SUPERFAMILY SSF53187 4 328 9.26E-56 T 29-03-2018 AL539_RS20965 7887909d68114308d3d643b4b8ce5f67 335 PIRSF PIRSF039012 1 333 7.1E-79 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS01460 a9c3af3d03770b3a8afbb3799a852101 398 Gene3D G3DSA:3.40.50.150 98 355 2.4E-4 T 29-03-2018 AL539_RS01460 a9c3af3d03770b3a8afbb3799a852101 398 Pfam PF13679 Methyltransferase domain 108 230 4.4E-18 T 29-03-2018 IPR025714 Methyltransferase domain AL539_RS01460 a9c3af3d03770b3a8afbb3799a852101 398 SUPERFAMILY SSF53335 121 202 4.82E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 Gene3D G3DSA:3.40.50.300 82 188 2.9E-34 T 29-03-2018 AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 29-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.184 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 Gene3D G3DSA:3.40.50.300 1 51 3.6E-4 T 29-03-2018 AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 Gene3D G3DSA:3.30.63.10 52 81 4.0E-27 T 29-03-2018 AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 SUPERFAMILY SSF52540 3 189 2.36E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 SMART SM00072 3 187 9.1E-77 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 Pfam PF00625 Guanylate kinase 5 185 1.8E-62 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL539_RS13030 a51e2090db776f3b7dddd3fe0e59e45e 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.1E-76 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL539_RS22375 49b925b1669f970230d28fb7e6d6adf1 267 SUPERFAMILY SSF56784 5 264 5.39E-67 T 29-03-2018 IPR023214 HAD-like domain AL539_RS22375 49b925b1669f970230d28fb7e6d6adf1 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.5E-51 T 29-03-2018 IPR000150 Cof family GO:0016787 AL539_RS22375 49b925b1669f970230d28fb7e6d6adf1 267 Gene3D G3DSA:3.30.1240.10 100 189 2.0E-30 T 29-03-2018 AL539_RS22375 49b925b1669f970230d28fb7e6d6adf1 267 Gene3D G3DSA:3.40.50.1000 4 99 1.4E-14 T 29-03-2018 IPR023214 HAD-like domain AL539_RS22375 49b925b1669f970230d28fb7e6d6adf1 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 2.1E-61 T 29-03-2018 IPR023214 HAD-like domain AL539_RS22375 49b925b1669f970230d28fb7e6d6adf1 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 1.5E-23 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL539_RS01495 865e3a9e13e1bbb85222fbecdafe8c4e 300 Pfam PF11860 N-acetylmuramidase 127 293 1.2E-63 T 29-03-2018 IPR024408 N-acetylmuramidase AL539_RS01495 865e3a9e13e1bbb85222fbecdafe8c4e 300 Gene3D G3DSA:1.10.530.10 113 298 3.8E-5 T 29-03-2018 AL539_RS01495 865e3a9e13e1bbb85222fbecdafe8c4e 300 Gene3D G3DSA:1.10.101.10 9 97 1.4E-5 T 29-03-2018 IPR002477 Peptidoglycan binding-like AL539_RS12305 995c0f7649b8af218a8f3ec5c54a7088 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 9.1E-38 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS12305 995c0f7649b8af218a8f3ec5c54a7088 694 Gene3D G3DSA:2.60.40.1180 662 692 0.011 T 29-03-2018 AL539_RS12305 995c0f7649b8af218a8f3ec5c54a7088 694 SUPERFAMILY SSF51445 190 665 3.0E-79 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS12305 995c0f7649b8af218a8f3ec5c54a7088 694 Gene3D G3DSA:2.60.40.1180 131 185 0.01 T 29-03-2018 AL539_RS12305 995c0f7649b8af218a8f3ec5c54a7088 694 SMART SM00642 203 656 4.6E-77 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS12305 995c0f7649b8af218a8f3ec5c54a7088 694 PIRSF PIRSF036917 1 694 0.0 T 29-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AL539_RS12305 995c0f7649b8af218a8f3ec5c54a7088 694 Gene3D G3DSA:3.20.20.80 194 661 3.7E-81 T 29-03-2018 AL539_RS04980 016cbb63445f80ff3247f3b0a74dfa8c 155 Pfam PF00293 NUDIX domain 22 129 3.7E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS04980 016cbb63445f80ff3247f3b0a74dfa8c 155 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS04980 016cbb63445f80ff3247f3b0a74dfa8c 155 SUPERFAMILY SSF55811 10 140 1.15E-29 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS04980 016cbb63445f80ff3247f3b0a74dfa8c 155 PRINTS PR00502 NUDIX hydrolase family signature 45 59 3.5E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS04980 016cbb63445f80ff3247f3b0a74dfa8c 155 PRINTS PR00502 NUDIX hydrolase family signature 59 74 3.5E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL539_RS04980 016cbb63445f80ff3247f3b0a74dfa8c 155 Gene3D G3DSA:3.90.79.10 1 139 1.4E-29 T 29-03-2018 AL539_RS18455 b6e097630b8f630eccef5e157a3b2d6b 129 Pfam PF00582 Universal stress protein family 2 125 5.6E-14 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS18455 b6e097630b8f630eccef5e157a3b2d6b 129 Gene3D G3DSA:3.40.50.620 2 128 1.9E-16 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS18455 b6e097630b8f630eccef5e157a3b2d6b 129 PIRSF PIRSF006276 1 129 3.5E-37 T 29-03-2018 IPR006015 Universal stress protein A AL539_RS18455 b6e097630b8f630eccef5e157a3b2d6b 129 SUPERFAMILY SSF52402 3 125 2.34E-21 T 29-03-2018 AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.81 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 SUPERFAMILY SSF54862 63 209 2.83E-24 T 29-03-2018 AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 3.4E-77 T 29-03-2018 IPR004494 MauM/NapG ferredoxin-type protein AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Gene3D G3DSA:3.30.70.20 73 120 1.1E-10 T 29-03-2018 AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Gene3D G3DSA:3.30.70.20 25 72 1.3E-6 T 29-03-2018 AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Gene3D G3DSA:3.30.70.20 121 160 1.6E-8 T 29-03-2018 AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 8.9E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Gene3D G3DSA:3.30.70.20 161 190 2.5E-7 T 29-03-2018 AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 Gene3D G3DSA:3.30.70.20 191 250 5.6E-4 T 29-03-2018 AL539_RS23960 8a8c42a8160549d3f0090bbbcc80829b 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 9.6E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS13850 034c2cd25610ea2721ba1db848d15406 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 13 206 3.4E-57 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AL539_RS13850 034c2cd25610ea2721ba1db848d15406 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 11 208 34.851 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AL539_RS13850 034c2cd25610ea2721ba1db848d15406 212 SUPERFAMILY SSF52507 11 207 4.45E-57 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL539_RS13850 034c2cd25610ea2721ba1db848d15406 212 Pfam PF02441 Flavoprotein 12 187 1.8E-25 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL539_RS13850 034c2cd25610ea2721ba1db848d15406 212 Gene3D G3DSA:3.40.50.1950 11 212 3.2E-50 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL539_RS18485 e7b3df5ba18bb7b1cc3190ca4abb60f3 103 Gene3D G3DSA:3.30.780.10 11 101 1.3E-20 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL539_RS18485 e7b3df5ba18bb7b1cc3190ca4abb60f3 103 SUPERFAMILY SSF55159 3 99 1.57E-26 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL539_RS18485 e7b3df5ba18bb7b1cc3190ca4abb60f3 103 PIRSF PIRSF037511 1 103 3.9E-32 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL539_RS18485 e7b3df5ba18bb7b1cc3190ca4abb60f3 103 Pfam PF01253 Translation initiation factor SUI1 28 96 1.1E-18 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL539_RS18485 e7b3df5ba18bb7b1cc3190ca4abb60f3 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.4E-38 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL539_RS22600 54155c68dba2e9a82e21cad7fb5393b4 422 Pfam PF12704 MacB-like periplasmic core domain 23 249 3.2E-16 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AL539_RS22600 54155c68dba2e9a82e21cad7fb5393b4 422 Pfam PF02687 FtsX-like permease family 315 411 7.5E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS12535 416dac0a7d1930cb6b56d651c1c34659 598 Pfam PF00920 Dehydratase family 68 594 2.3E-148 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS12535 416dac0a7d1930cb6b56d651c1c34659 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.3E-250 T 29-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AL539_RS12535 416dac0a7d1930cb6b56d651c1c34659 598 SUPERFAMILY SSF52016 418 596 4.16E-52 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_RS12535 416dac0a7d1930cb6b56d651c1c34659 598 SUPERFAMILY SSF143975 3 417 5.49E-131 T 29-03-2018 AL539_RS12535 416dac0a7d1930cb6b56d651c1c34659 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS12535 416dac0a7d1930cb6b56d651c1c34659 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL539_RS25100 62d0f8060676ca5ee87d2336c6f4349f 208 SUPERFAMILY SSF103088 92 204 2.88E-30 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS25100 62d0f8060676ca5ee87d2336c6f4349f 208 Gene3D G3DSA:3.30.1330.60 53 208 4.9E-31 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS25100 62d0f8060676ca5ee87d2336c6f4349f 208 PRINTS PR01021 OMPA domain signature 104 126 1.6E-8 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS25100 62d0f8060676ca5ee87d2336c6f4349f 208 PRINTS PR01021 OMPA domain signature 134 149 1.6E-8 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS25100 62d0f8060676ca5ee87d2336c6f4349f 208 PRINTS PR01021 OMPA domain signature 149 165 1.6E-8 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS25100 62d0f8060676ca5ee87d2336c6f4349f 208 Pfam PF00691 OmpA family 104 198 2.1E-17 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS23875 8ca79de1d87d0a702c873a1ccf6be354 322 Pfam PF05229 Spore Coat Protein U domain 18 156 9.3E-12 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS23875 8ca79de1d87d0a702c873a1ccf6be354 322 Pfam PF05229 Spore Coat Protein U domain 182 318 2.3E-30 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS23875 8ca79de1d87d0a702c873a1ccf6be354 322 Gene3D G3DSA:2.60.40.1090 18 161 6.5E-4 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AL539_RS23875 8ca79de1d87d0a702c873a1ccf6be354 322 SMART SM00972 253 319 2.0E-8 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS23875 8ca79de1d87d0a702c873a1ccf6be354 322 SMART SM00972 93 157 2.4E-8 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 SMART SM00267 267 434 6.7E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 Gene3D G3DSA:2.60.120.430 27 217 1.2E-11 T 29-03-2018 AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 Gene3D G3DSA:3.30.70.270 261 435 7.2E-46 T 29-03-2018 AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 9.7E-39 T 29-03-2018 IPR000160 GGDEF domain AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 SUPERFAMILY SSF55073 283 434 1.65E-40 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 39 167 3.3E-4 T 29-03-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 SUPERFAMILY SSF49785 39 215 4.42E-12 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS02145 dfac1e893f6ec9f57507003ddfa5ee6f 439 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 433 1.1E-41 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03225 241176ccd2f1fdb64ca229c7927d2594 325 SUPERFAMILY SSF51735 2 150 8.4E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS03225 241176ccd2f1fdb64ca229c7927d2594 325 Gene3D G3DSA:3.40.50.720 1 142 3.5E-38 T 29-03-2018 AL539_RS03225 241176ccd2f1fdb64ca229c7927d2594 325 SUPERFAMILY SSF55347 125 293 1.8E-18 T 29-03-2018 AL539_RS03225 241176ccd2f1fdb64ca229c7927d2594 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 3.0E-19 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL539_RS03225 241176ccd2f1fdb64ca229c7927d2594 325 Gene3D G3DSA:3.30.360.10 143 323 2.4E-19 T 29-03-2018 AL539_RS22180 59846b666bf64822c87816dec4ef3b21 364 SUPERFAMILY SSF48695 8 176 5.17E-50 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS22180 59846b666bf64822c87816dec4ef3b21 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 5.8E-67 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL539_RS22180 59846b666bf64822c87816dec4ef3b21 364 Gene3D G3DSA:3.90.10.10 36 360 4.5E-28 T 29-03-2018 AL539_RS22180 59846b666bf64822c87816dec4ef3b21 364 PIRSF PIRSF000014 1 364 7.2E-162 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL539_RS03040 d7a1cbd4f1f9187419b54a844a1a9778 437 SUPERFAMILY SSF56954 5 419 9.16E-85 T 29-03-2018 AL539_RS03040 d7a1cbd4f1f9187419b54a844a1a9778 437 Gene3D G3DSA:1.20.1600.10 12 427 2.0E-68 T 29-03-2018 AL539_RS03040 d7a1cbd4f1f9187419b54a844a1a9778 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 432 9.7E-87 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL539_RS03040 d7a1cbd4f1f9187419b54a844a1a9778 437 Pfam PF02321 Outer membrane efflux protein 233 417 2.7E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS03040 d7a1cbd4f1f9187419b54a844a1a9778 437 Pfam PF02321 Outer membrane efflux protein 22 213 7.5E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS13230 9bc8d8400d9c7844076cf37c359182ed 294 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 289 1.2E-100 T 29-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL539_RS13230 9bc8d8400d9c7844076cf37c359182ed 294 Gene3D G3DSA:3.40.50.720 2 198 2.9E-28 T 29-03-2018 AL539_RS13230 9bc8d8400d9c7844076cf37c359182ed 294 Pfam PF04321 RmlD substrate binding domain 3 289 8.8E-104 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL539_RS13230 9bc8d8400d9c7844076cf37c359182ed 294 SUPERFAMILY SSF51735 1 290 1.84E-98 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13230 9bc8d8400d9c7844076cf37c359182ed 294 Gene3D G3DSA:3.90.25.10 199 280 5.5E-22 T 29-03-2018 AL539_RS18180 12f43a4950ed9bae5c0da8c513b26be8 63 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 5.2E-21 T 29-03-2018 IPR021677 Protein of unknown function DUF2986 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:1.10.8.50 1 66 4.4E-24 T 29-03-2018 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 29-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.3E-53 T 29-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:4.10.910.10 67 84 1.3E-19 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.865 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 PIRSF PIRSF002134 1 118 2.5E-41 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:4.10.910.10 85 118 1.4E-25 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 SUPERFAMILY SSF46946 2 114 3.24E-45 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL539_RS13635 8cdcd737f9076fe59ef6e51b524c5913 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-32 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Gene3D G3DSA:3.30.70.920 58 150 1.1E-26 T 29-03-2018 AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.3E-22 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 3.8E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 3.8E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 3.8E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 SUPERFAMILY SSF46785 3 64 7.58E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 1.6E-15 T 29-03-2018 AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 SMART SM00344 5 114 3.7E-42 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Gene3D G3DSA:1.10.10.10 5 56 3.4E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_RS22840 6a1f1ae1dc5278b0fa59744a68d7bfef 158 SUPERFAMILY SSF54909 65 150 1.88E-20 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS01985 ae7ee7a576b6405e35969eff7552d329 483 Pfam PF13460 NAD(P)H-binding 8 150 1.8E-14 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS01985 ae7ee7a576b6405e35969eff7552d329 483 Gene3D G3DSA:3.40.50.720 1 302 1.3E-25 T 29-03-2018 AL539_RS01985 ae7ee7a576b6405e35969eff7552d329 483 SUPERFAMILY SSF51735 1 295 6.44E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS01985 ae7ee7a576b6405e35969eff7552d329 483 Pfam PF11066 Protein of unknown function (DUF2867) 334 466 1.8E-12 T 29-03-2018 IPR021295 Protein of unknown function DUF2867 AL539_RS25280 39b349938182a27ff75f789a62b62391 463 Gene3D G3DSA:1.10.10.10 235 350 1.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25280 39b349938182a27ff75f789a62b62391 463 Gene3D G3DSA:1.10.10.10 17 233 2.7E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25280 39b349938182a27ff75f789a62b62391 463 SUPERFAMILY SSF46785 223 302 1.45E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25280 39b349938182a27ff75f789a62b62391 463 Pfam PF01051 Initiator Replication protein 146 337 3.6E-15 T 29-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 Gene3D G3DSA:2.40.50.140 1 83 2.7E-26 T 29-03-2018 AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 SUPERFAMILY SSF53335 77 438 6.72E-84 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 4.2E-127 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 5.0E-31 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 SUPERFAMILY SSF50249 18 74 2.63E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 Pfam PF01938 TRAM domain 16 68 1.4E-8 T 29-03-2018 IPR002792 TRAM domain AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 Gene3D G3DSA:3.40.50.150 84 437 4.2E-56 T 29-03-2018 AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL539_RS09000 27947b85c27de9cbf54c0a3de9f39523 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 63.339 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL539_RS09290 f253d7e3ab86c44ef077120344490779 392 Pfam PF04055 Radical SAM superfamily 11 181 3.5E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS09290 f253d7e3ab86c44ef077120344490779 392 Gene3D G3DSA:1.10.10.10 326 380 0.012 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09290 f253d7e3ab86c44ef077120344490779 392 SUPERFAMILY SSF102114 4 386 1.16E-110 T 29-03-2018 AL539_RS09290 f253d7e3ab86c44ef077120344490779 392 Pfam PF06969 HemN C-terminal domain 314 374 1.5E-8 T 29-03-2018 IPR010723 HemN, C-terminal AL539_RS09290 f253d7e3ab86c44ef077120344490779 392 SMART SM00729 6 227 7.7E-54 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS09290 f253d7e3ab86c44ef077120344490779 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 1.5E-136 T 29-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL539_RS09290 f253d7e3ab86c44ef077120344490779 392 Gene3D G3DSA:3.20.20.70 3 308 7.8E-46 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 SUPERFAMILY SSF52096 3 304 1.31E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Gene3D G3DSA:3.90.226.10 1 205 1.2E-54 T 29-03-2018 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 SUPERFAMILY SSF48179 494 593 3.06E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 216 2.1E-40 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 7.2E-54 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Gene3D G3DSA:1.10.1040.10 610 701 1.1E-19 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Gene3D G3DSA:1.10.1040.10 493 592 1.8E-23 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 3.2E-25 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 9.0E-5 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 29-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 SUPERFAMILY SSF48179 610 703 2.98E-26 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 53.004 T 29-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 SUPERFAMILY SSF51735 310 491 3.94E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS07155 1c103607a030ec3344aaf1edede4967a 703 Gene3D G3DSA:3.40.50.720 254 492 4.9E-54 T 29-03-2018 AL539_RS01525 aba74487de685685e8fc55a96897f90c 273 SUPERFAMILY SSF53335 25 205 3.19E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS01525 aba74487de685685e8fc55a96897f90c 273 Pfam PF08241 Methyltransferase domain 63 155 2.1E-26 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL539_RS01525 aba74487de685685e8fc55a96897f90c 273 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 27 271 9.9E-69 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AL539_RS01525 aba74487de685685e8fc55a96897f90c 273 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 19 273 32.039 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AL539_RS01525 aba74487de685685e8fc55a96897f90c 273 Gene3D G3DSA:3.40.50.150 10 257 2.8E-37 T 29-03-2018 AL539_RS20930 6d6ec71a6aa8c609d1c6eb94c19cd0aa 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 1.9E-96 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL539_RS20930 6d6ec71a6aa8c609d1c6eb94c19cd0aa 374 Gene3D G3DSA:3.20.20.70 1 374 6.7E-128 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS20930 6d6ec71a6aa8c609d1c6eb94c19cd0aa 374 SUPERFAMILY SSF51395 3 369 1.53E-125 T 29-03-2018 AL539_RS02255 dc30ca7c6de042c8596a68440fa36d01 247 Pfam PF07070 SpoOM protein 2 215 3.4E-63 T 29-03-2018 IPR009776 Sporulation stage 0, protein M AL539_RS07535 82936f8438fbadbb397f4cdb42f38f2f 156 PIRSF PIRSF000239 1 147 2.2E-17 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS07535 82936f8438fbadbb397f4cdb42f38f2f 156 Pfam PF00578 AhpC/TSA family 7 134 2.7E-35 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL539_RS07535 82936f8438fbadbb397f4cdb42f38f2f 156 SUPERFAMILY SSF52833 4 154 7.37E-48 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS07535 82936f8438fbadbb397f4cdb42f38f2f 156 Gene3D G3DSA:3.40.30.10 1 153 2.9E-40 T 29-03-2018 AL539_RS19625 c525edbda9861c563a8630d3bbc41362 258 SUPERFAMILY SSF52096 3 257 1.14E-76 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS19625 c525edbda9861c563a8630d3bbc41362 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 7.4E-58 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL539_RS19625 c525edbda9861c563a8630d3bbc41362 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL539_RS19625 c525edbda9861c563a8630d3bbc41362 258 Gene3D G3DSA:3.90.226.10 4 215 4.7E-61 T 29-03-2018 AL539_RS19625 c525edbda9861c563a8630d3bbc41362 258 Gene3D G3DSA:1.10.12.10 216 258 1.3E-17 T 29-03-2018 IPR014748 Crontonase, C-terminal AL539_RS16140 016ba7322e0f36b0d7c15c8a595c3024 365 Pfam PF02562 PhoH-like protein 120 323 2.5E-93 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 AL539_RS16140 016ba7322e0f36b0d7c15c8a595c3024 365 SUPERFAMILY SSF52540 119 320 6.54E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS16140 016ba7322e0f36b0d7c15c8a595c3024 365 Gene3D G3DSA:3.40.50.300 116 324 1.4E-26 T 29-03-2018 AL539_RS05765 951f98bcd31dabb8823d6f572dae4e78 429 Pfam PF09375 Imelysin 49 406 1.7E-97 T 29-03-2018 IPR018976 Peptidase M75, Imelysin AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 Gene3D G3DSA:3.30.70.20 54 113 6.4E-17 T 29-03-2018 AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 1.7E-131 T 29-03-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 Gene3D G3DSA:3.30.70.20 114 149 7.4E-20 T 29-03-2018 AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 3.0E-26 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 Pfam PF12800 4Fe-4S binding domain 49 61 0.14 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 Gene3D G3DSA:3.30.70.20 26 53 1.1E-4 T 29-03-2018 AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 Gene3D G3DSA:3.30.70.20 150 227 2.4E-24 T 29-03-2018 AL539_RS05800 3e54c8274aef1b513edba2c19b7bbf67 228 SUPERFAMILY SSF54862 40 220 9.63E-65 T 29-03-2018 AL539_RS23055 f712eb7acc6d3784a8731fca150065b9 254 Pfam PF00005 ABC transporter 19 165 2.1E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS23055 f712eb7acc6d3784a8731fca150065b9 254 Gene3D G3DSA:3.40.50.300 1 239 6.2E-62 T 29-03-2018 AL539_RS23055 f712eb7acc6d3784a8731fca150065b9 254 SMART SM00382 26 213 2.1E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS23055 f712eb7acc6d3784a8731fca150065b9 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS23055 f712eb7acc6d3784a8731fca150065b9 254 SUPERFAMILY SSF52540 2 226 9.87E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24430 a5134ae779bcfb120fe7d9b479a13822 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 174 9.3E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS24430 a5134ae779bcfb120fe7d9b479a13822 726 Pfam PF00593 TonB dependent receptor 202 723 1.5E-33 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS24430 a5134ae779bcfb120fe7d9b479a13822 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 726 2.1E-162 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS24430 a5134ae779bcfb120fe7d9b479a13822 726 Gene3D G3DSA:2.170.130.10 39 195 8.5E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS24430 a5134ae779bcfb120fe7d9b479a13822 726 Gene3D G3DSA:2.40.170.20 196 726 5.1E-62 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS24430 a5134ae779bcfb120fe7d9b479a13822 726 SUPERFAMILY SSF56935 72 726 3.66E-104 T 29-03-2018 AL539_RS09950 a68f900556782ae01341d61618b185e1 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 1.1E-37 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS09950 a68f900556782ae01341d61618b185e1 148 Gene3D G3DSA:3.40.930.10 1 148 1.5E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS09950 a68f900556782ae01341d61618b185e1 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AL539_RS09950 a68f900556782ae01341d61618b185e1 148 SUPERFAMILY SSF55804 1 145 7.85E-41 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AL539_RS09950 a68f900556782ae01341d61618b185e1 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 1.3E-51 T 29-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AL539_RS25675 5791af6d53c7e5a7719057d3d77a54a8 146 Pfam PF06146 Phosphate-starvation-inducible E 64 130 6.6E-19 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL539_RS22335 91b809325e3b36668594153b5214f0fe 257 Gene3D G3DSA:2.40.30.10 1 120 3.8E-30 T 29-03-2018 AL539_RS22335 91b809325e3b36668594153b5214f0fe 257 Gene3D G3DSA:3.40.50.80 122 257 3.0E-37 T 29-03-2018 AL539_RS22335 91b809325e3b36668594153b5214f0fe 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 5.8E-33 T 29-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AL539_RS22335 91b809325e3b36668594153b5214f0fe 257 Pfam PF04954 Siderophore-interacting protein 127 239 1.4E-31 T 29-03-2018 IPR007037 Siderophore-interacting protein AL539_RS22335 91b809325e3b36668594153b5214f0fe 257 SUPERFAMILY SSF63380 6 117 1.97E-11 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AL539_RS06690 bd03a5f0c7c2494245a4cd6c30f95733 765 PIRSF PIRSF000379 8 765 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL539_RS06690 bd03a5f0c7c2494245a4cd6c30f95733 765 SUPERFAMILY SSF51998 7 763 3.97E-277 T 29-03-2018 AL539_RS06690 bd03a5f0c7c2494245a4cd6c30f95733 765 Pfam PF01228 Glycine radical 630 746 6.3E-42 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AL539_RS06690 bd03a5f0c7c2494245a4cd6c30f95733 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 7.0E-196 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL539_RS06690 bd03a5f0c7c2494245a4cd6c30f95733 765 Gene3D G3DSA:3.20.70.20 3 765 9.0E-283 T 29-03-2018 AL539_RS06690 bd03a5f0c7c2494245a4cd6c30f95733 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 764 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL539_RS06690 bd03a5f0c7c2494245a4cd6c30f95733 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_RS06550 0ae7ce12371c88df2b95fee4456ab255 205 Pfam PF03695 Uncharacterised protein family (UPF0149) 18 151 2.1E-7 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS06550 0ae7ce12371c88df2b95fee4456ab255 205 SUPERFAMILY SSF103642 182 202 1.57E-7 T 29-03-2018 AL539_RS06550 0ae7ce12371c88df2b95fee4456ab255 205 Gene3D G3DSA:3.10.450.50 44 204 3.9E-14 T 29-03-2018 AL539_RS06550 0ae7ce12371c88df2b95fee4456ab255 205 Pfam PF02810 SEC-C motif 184 202 9.1E-10 T 29-03-2018 IPR004027 SEC-C motif AL539_RS07530 220127384b38cc0ef3030460cc4b2142 180 SUPERFAMILY SSF55021 1 81 6.01E-18 T 29-03-2018 AL539_RS07530 220127384b38cc0ef3030460cc4b2142 180 PIRSF PIRSF028103 1 178 5.6E-68 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL539_RS07530 220127384b38cc0ef3030460cc4b2142 180 SUPERFAMILY SSF55021 90 176 6.59E-21 T 29-03-2018 AL539_RS07530 220127384b38cc0ef3030460cc4b2142 180 Gene3D G3DSA:3.30.70.260 86 175 1.5E-13 T 29-03-2018 AL539_RS07530 220127384b38cc0ef3030460cc4b2142 180 Gene3D G3DSA:3.30.70.260 1 85 1.1E-12 T 29-03-2018 AL539_RS07530 220127384b38cc0ef3030460cc4b2142 180 Pfam PF13740 ACT domain 3 78 1.5E-22 T 29-03-2018 AL539_RS03490 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 2.4E-36 T 29-03-2018 IPR021343 Protein of unknown function DUF2960 AL539_RS08685 14b0ceeb31a463b731e2a382ff5b970a 556 Gene3D G3DSA:3.30.750.24 427 550 1.2E-13 T 29-03-2018 IPR002645 STAS domain AL539_RS08685 14b0ceeb31a463b731e2a382ff5b970a 556 Pfam PF00916 Sulfate permease family 11 376 3.5E-85 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL539_RS08685 14b0ceeb31a463b731e2a382ff5b970a 556 SUPERFAMILY SSF52091 439 541 1.81E-11 T 29-03-2018 IPR002645 STAS domain AL539_RS08685 14b0ceeb31a463b731e2a382ff5b970a 556 Pfam PF01740 STAS domain 440 533 7.3E-12 T 29-03-2018 IPR002645 STAS domain AL539_RS05620 c26b393a19650831cd36415aa92304f5 571 SMART SM00052 343 570 1.3E-13 T 29-03-2018 IPR001633 EAL domain AL539_RS05620 c26b393a19650831cd36415aa92304f5 571 SUPERFAMILY SSF141868 358 567 8.5E-47 T 29-03-2018 IPR001633 EAL domain AL539_RS05620 c26b393a19650831cd36415aa92304f5 571 Pfam PF00563 EAL domain 358 567 2.5E-40 T 29-03-2018 IPR001633 EAL domain AL539_RS05620 c26b393a19650831cd36415aa92304f5 571 Gene3D G3DSA:3.20.20.450 347 568 6.3E-45 T 29-03-2018 IPR001633 EAL domain AL539_RS21490 2eca0aaed04163eb531b3d0ca4e4f564 145 Pfam PF05130 FlgN protein 8 132 9.8E-15 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL539_RS21490 2eca0aaed04163eb531b3d0ca4e4f564 145 Gene3D G3DSA:1.20.58.300 7 135 2.9E-21 T 29-03-2018 AL539_RS21490 2eca0aaed04163eb531b3d0ca4e4f564 145 SUPERFAMILY SSF140566 8 136 7.32E-27 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL539_RS18040 4ef6c1585e0f007939c84b4f7ed934ce 243 Pfam PF03591 AzlC protein 32 171 1.4E-34 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease AL539_RS20785 f6d9f28101c69fc7811fffc2e1afa934 285 SUPERFAMILY SSF52833 38 130 1.56E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS20785 f6d9f28101c69fc7811fffc2e1afa934 285 Gene3D G3DSA:3.40.30.10 44 144 2.0E-22 T 29-03-2018 AL539_RS20785 f6d9f28101c69fc7811fffc2e1afa934 285 Gene3D G3DSA:1.20.1050.10 145 282 1.4E-27 T 29-03-2018 AL539_RS20785 f6d9f28101c69fc7811fffc2e1afa934 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 126 1.0E-5 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS20785 f6d9f28101c69fc7811fffc2e1afa934 285 SUPERFAMILY SSF47616 180 258 1.5E-31 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS20785 f6d9f28101c69fc7811fffc2e1afa934 285 SUPERFAMILY SSF47616 116 151 1.5E-31 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS20785 f6d9f28101c69fc7811fffc2e1afa934 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 242 2.5E-9 T 29-03-2018 AL539_RS24525 de42dd1ad85cec23fae602f5620211d9 260 Gene3D G3DSA:3.40.50.300 1 246 2.0E-53 T 29-03-2018 AL539_RS24525 de42dd1ad85cec23fae602f5620211d9 260 SUPERFAMILY SSF52540 5 233 2.06E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24525 de42dd1ad85cec23fae602f5620211d9 260 Pfam PF00005 ABC transporter 21 170 3.7E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24525 de42dd1ad85cec23fae602f5620211d9 260 SMART SM00382 30 219 5.5E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS18080 347647c165d6a7ce540fd6ea3e19291b 309 SMART SM00880 24 287 6.0E-26 T 29-03-2018 IPR007899 CHAD domain AL539_RS18080 347647c165d6a7ce540fd6ea3e19291b 309 Pfam PF05235 CHAD domain 32 252 3.3E-45 T 29-03-2018 IPR007899 CHAD domain AL539_RS19075 f2e3725c6cb39fcbca61ac9a3ae4fe7f 632 SUPERFAMILY SSF52266 402 599 1.33E-5 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AL539_RS19075 f2e3725c6cb39fcbca61ac9a3ae4fe7f 632 Gene3D G3DSA:3.40.50.1110 394 608 8.6E-10 T 29-03-2018 AL539_RS19075 f2e3725c6cb39fcbca61ac9a3ae4fe7f 632 Pfam PF01757 Acyltransferase family 5 318 6.1E-29 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL539_RS16615 679ba7265baf80c43e1965b21e4f71fb 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 6.3E-70 T 29-03-2018 IPR011435 Protein of unknown function DUF1538 AL539_RS19745 b02b104fbe0d98d40a0f553c8bbad7ad 637 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 51 503 5.4E-148 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS19745 b02b104fbe0d98d40a0f553c8bbad7ad 637 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AL539_RS19745 b02b104fbe0d98d40a0f553c8bbad7ad 637 Gene3D G3DSA:1.20.1000.10 294 623 4.1E-4 T 29-03-2018 AL539_RS19745 b02b104fbe0d98d40a0f553c8bbad7ad 637 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 3.7E-161 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 SUPERFAMILY SSF53613 9 296 7.64E-70 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 Gene3D G3DSA:3.40.1190.20 50 315 9.1E-50 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 Gene3D G3DSA:2.20.150.10 15 49 3.2E-11 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 Pfam PF00294 pfkB family carbohydrate kinase 18 297 1.2E-53 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 8 311 4.3E-102 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 PIRSF PIRSF000535 5 314 2.2E-96 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 8 311 2.5E-102 T 29-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AL539_RS18840 fa0a502bbf29bbd08c8292c8b2043519 323 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 42 66 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 SUPERFAMILY SSF88723 7 68 4.12E-14 T 29-03-2018 IPR029060 PIN domain-like AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 SUPERFAMILY SSF88723 104 160 4.12E-14 T 29-03-2018 IPR029060 PIN domain-like AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 Pfam PF02562 PhoH-like protein 248 452 1.6E-53 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 SUPERFAMILY SSF52540 247 437 2.14E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 Gene3D G3DSA:3.40.50.300 253 453 3.8E-20 T 29-03-2018 AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 SMART SM00670 7 141 2.7E-11 T 29-03-2018 IPR002716 PIN domain AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 Pfam PF13638 PIN domain 9 150 4.7E-35 T 29-03-2018 IPR002716 PIN domain AL539_RS10000 f3aef50867ffb613aa0a11f72c1507f0 458 Gene3D G3DSA:3.40.50.1010 6 252 9.2E-32 T 29-03-2018 IPR029060 PIN domain-like AL539_RS22280 f7f231dc563f97ed4bae2e5fde4ca7ba 378 SUPERFAMILY SSF56281 98 175 1.11E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS22280 f7f231dc563f97ed4bae2e5fde4ca7ba 378 SUPERFAMILY SSF56281 202 354 1.11E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS22280 f7f231dc563f97ed4bae2e5fde4ca7ba 378 Pfam PF12706 Beta-lactamase superfamily domain 116 316 7.7E-38 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS22280 f7f231dc563f97ed4bae2e5fde4ca7ba 378 Gene3D G3DSA:3.60.15.10 77 369 5.0E-46 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS06440 9475ec818662488277e054e06503a4ad 341 Pfam PF02504 Fatty acid synthesis protein 5 327 9.8E-102 T 29-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AL539_RS06440 9475ec818662488277e054e06503a4ad 341 SUPERFAMILY SSF53659 4 336 1.97E-103 T 29-03-2018 AL539_RS06440 9475ec818662488277e054e06503a4ad 341 Gene3D G3DSA:3.40.718.10 1 337 7.5E-105 T 29-03-2018 AL539_RS06440 9475ec818662488277e054e06503a4ad 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 7.1E-107 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL539_RS06440 9475ec818662488277e054e06503a4ad 341 PIRSF PIRSF002465 2 339 8.1E-125 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL539_RS06440 9475ec818662488277e054e06503a4ad 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 138.62 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.1E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 7.1E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 7.1E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 7.1E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 7.1E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:2.40.30.10 294 406 8.7E-32 T 29-03-2018 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF54980 608 695 2.45E-30 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.40.50.300 2 293 4.9E-60 T 29-03-2018 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF00009 Elongation factor Tu GTP binding domain 10 288 1.2E-65 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.0E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.30.70.870 407 496 1.2E-35 T 29-03-2018 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF52540 6 288 4.35E-105 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF54211 484 604 7.08E-47 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 187 5.8E-34 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 SMART SM00889 485 603 5.5E-76 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.1E-48 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.131 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF14492 Elongation Factor G, domain II 409 483 5.7E-33 T 29-03-2018 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 SMART SM00838 605 693 4.8E-57 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF50447 271 409 2.65E-36 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF00679 Elongation factor G C-terminus 605 692 1.0E-31 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.30.70.240 614 692 1.7E-32 T 29-03-2018 AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS10410 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.30.230.10 497 613 2.3E-44 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS09910 364303803b61e1c54b27cdad6e4906ef 267 Gene3D G3DSA:3.40.50.300 3 262 7.2E-65 T 29-03-2018 AL539_RS09910 364303803b61e1c54b27cdad6e4906ef 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS09910 364303803b61e1c54b27cdad6e4906ef 267 Pfam PF00005 ABC transporter 23 170 1.4E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS09910 364303803b61e1c54b27cdad6e4906ef 267 SMART SM00382 31 228 2.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS09910 364303803b61e1c54b27cdad6e4906ef 267 SUPERFAMILY SSF52540 6 236 2.41E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02515 ca031fe540e11903ed02f8f903853e86 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 412 7.4E-9 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02515 ca031fe540e11903ed02f8f903853e86 426 SUPERFAMILY SSF161098 37 63 5.36E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02515 ca031fe540e11903ed02f8f903853e86 426 SUPERFAMILY SSF161098 170 416 5.36E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02515 ca031fe540e11903ed02f8f903853e86 426 Gene3D G3DSA:1.10.3720.10 39 418 1.9E-45 T 29-03-2018 AL539_RS16550 a9f2049d181ab3789a07a66b6b9322bf 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AL539_RS16550 a9f2049d181ab3789a07a66b6b9322bf 322 Gene3D G3DSA:3.40.50.1100 138 322 2.2E-60 T 29-03-2018 AL539_RS16550 a9f2049d181ab3789a07a66b6b9322bf 322 SUPERFAMILY SSF53686 3 313 1.57E-96 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS16550 a9f2049d181ab3789a07a66b6b9322bf 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.1E-142 T 29-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL539_RS16550 a9f2049d181ab3789a07a66b6b9322bf 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.5E-135 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL539_RS16550 a9f2049d181ab3789a07a66b6b9322bf 322 Gene3D G3DSA:3.40.50.1100 40 137 1.1E-31 T 29-03-2018 AL539_RS16550 a9f2049d181ab3789a07a66b6b9322bf 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.0E-68 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS03220 98ad45f48a5ec051a928287d3258ffd8 95 Gene3D G3DSA:3.30.70.100 1 94 3.6E-15 T 29-03-2018 AL539_RS03220 98ad45f48a5ec051a928287d3258ffd8 95 SUPERFAMILY SSF54909 4 88 7.15E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS03220 98ad45f48a5ec051a928287d3258ffd8 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 80 3.2E-10 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 SMART SM00862 149 225 7.0E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 SUPERFAMILY SSF46894 125 226 2.07E-24 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 Gene3D G3DSA:3.40.50.2300 1 123 2.6E-36 T 29-03-2018 AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 SMART SM00448 2 111 1.9E-43 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 SUPERFAMILY SSF52172 1 127 1.57E-39 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 Gene3D G3DSA:1.10.10.10 124 229 1.7E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS10895 83bb81318c19476ee6f1a1918e6ef4dc 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 2.8E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS13970 0441593f42b55e29362bf88f3a66695b 332 SUPERFAMILY SSF53659 7 329 2.4E-110 T 29-03-2018 AL539_RS13970 0441593f42b55e29362bf88f3a66695b 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 3.6E-107 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL539_RS13970 0441593f42b55e29362bf88f3a66695b 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 328 35.921 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL539_RS13970 0441593f42b55e29362bf88f3a66695b 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 2.6E-127 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AL539_RS13970 0441593f42b55e29362bf88f3a66695b 332 Gene3D G3DSA:3.40.718.10 1 332 1.8E-128 T 29-03-2018 AL539_RS23485 50b239469584fd3b3e200cca66622c81 223 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 222 29.435 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL539_RS23485 50b239469584fd3b3e200cca66622c81 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 218 2.0E-52 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 SUPERFAMILY SSF47729 1 90 3.97E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 SMART SM00411 1 90 1.4E-46 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 Gene3D G3DSA:4.10.520.10 1 90 2.8E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AL539_RS11145 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL539_RS24970 d1fd40451153689ebf02508434a47562 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.5E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24970 d1fd40451153689ebf02508434a47562 295 Gene3D G3DSA:1.10.10.10 5 80 1.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24970 d1fd40451153689ebf02508434a47562 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24970 d1fd40451153689ebf02508434a47562 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24970 d1fd40451153689ebf02508434a47562 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24970 d1fd40451153689ebf02508434a47562 295 Gene3D G3DSA:3.40.190.10 177 260 2.6E-16 T 29-03-2018 AL539_RS24970 d1fd40451153689ebf02508434a47562 295 SUPERFAMILY SSF53850 89 291 2.17E-28 T 29-03-2018 AL539_RS24970 d1fd40451153689ebf02508434a47562 295 Pfam PF03466 LysR substrate binding domain 88 289 1.5E-27 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS24970 d1fd40451153689ebf02508434a47562 295 SUPERFAMILY SSF46785 8 88 9.53E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24970 d1fd40451153689ebf02508434a47562 295 Gene3D G3DSA:3.40.190.10 81 176 1.8E-8 T 29-03-2018 AL539_RS01945 1968fac112dc4484bff8ea543128ebe8 449 SMART SM00387 342 448 4.6E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS01945 1968fac112dc4484bff8ea543128ebe8 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 446 6.4E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS01945 1968fac112dc4484bff8ea543128ebe8 449 SUPERFAMILY SSF47384 224 287 1.18E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS01945 1968fac112dc4484bff8ea543128ebe8 449 Gene3D G3DSA:3.30.565.10 305 449 1.3E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS01945 1968fac112dc4484bff8ea543128ebe8 449 SUPERFAMILY SSF55874 309 444 2.23E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS01945 1968fac112dc4484bff8ea543128ebe8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 7.7E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS01945 1968fac112dc4484bff8ea543128ebe8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 7.7E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS21025 b54c7577c9725927ab22ea5b9170601a 259 Gene3D G3DSA:1.10.287.700 18 145 6.4E-8 T 29-03-2018 AL539_RS15385 f8f998f0235f39895d94577ab2dbacc2 74 Pfam PF07191 zinc-ribbons 5 68 7.0E-27 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 AL539_RS15385 f8f998f0235f39895d94577ab2dbacc2 74 SUPERFAMILY SSF161187 3 70 2.22E-26 T 29-03-2018 IPR029037 YfgJ-like AL539_RS15385 f8f998f0235f39895d94577ab2dbacc2 74 Gene3D G3DSA:2.10.290.10 2 71 9.3E-5 T 29-03-2018 AL539_RS15385 f8f998f0235f39895d94577ab2dbacc2 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 2.0E-27 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 AL539_RS12885 b3a078ea31d161ac5b060ab0ece712b3 308 SUPERFAMILY SSF50156 212 308 1.71E-19 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS12885 b3a078ea31d161ac5b060ab0ece712b3 308 Gene3D G3DSA:2.30.42.10 179 307 2.4E-10 T 29-03-2018 AL539_RS12885 b3a078ea31d161ac5b060ab0ece712b3 308 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 308 2.0E-74 T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL539_RS12885 b3a078ea31d161ac5b060ab0ece712b3 308 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 246 272 - T 29-03-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL539_RS12885 b3a078ea31d161ac5b060ab0ece712b3 308 Pfam PF11356 Type II secretion system protein C 37 177 1.1E-43 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal AL539_RS22315 66f76f1da5f5dd4d4fdb360c864c0c81 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 4.3E-25 T 29-03-2018 AL539_RS22315 66f76f1da5f5dd4d4fdb360c864c0c81 206 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 2.3E-30 T 29-03-2018 AL539_RS22315 66f76f1da5f5dd4d4fdb360c864c0c81 206 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 195 1.2E-32 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL539_RS22315 66f76f1da5f5dd4d4fdb360c864c0c81 206 SUPERFAMILY SSF56784 7 195 6.43E-22 T 29-03-2018 IPR023214 HAD-like domain AL539_RS22315 66f76f1da5f5dd4d4fdb360c864c0c81 206 Gene3D G3DSA:3.40.50.1000 2 203 8.1E-14 T 29-03-2018 IPR023214 HAD-like domain AL539_RS04350 a00047ea60ebbe0309d82af471a3cecc 334 Pfam PF05844 YopD protein 66 331 7.9E-36 T 29-03-2018 IPR008898 YopD-like AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.283 T 29-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 3.4E-238 T 29-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 SUPERFAMILY SSF52540 4 580 1.21E-214 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 29-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 Gene3D G3DSA:3.10.410.10 470 558 9.4E-31 T 29-03-2018 AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 29-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 Gene3D G3DSA:3.40.50.300 12 253 7.3E-89 T 29-03-2018 AL539_RS18760 ce558e98fa4c5ec93f10166d253c04ce 582 Gene3D G3DSA:3.40.50.300 254 468 2.2E-61 T 29-03-2018 AL539_RS16580 c0b47143fb7c4c645fcc09b50beabf4f 153 SUPERFAMILY SSF141322 96 149 7.19E-6 T 29-03-2018 AL539_RS16580 c0b47143fb7c4c645fcc09b50beabf4f 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 151 5.1E-25 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain AL539_RS16580 c0b47143fb7c4c645fcc09b50beabf4f 153 Gene3D G3DSA:2.40.50.140 82 153 4.1E-15 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Pfam PF10531 SLBB domain 198 246 3.8E-8 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Pfam PF10531 SLBB domain 546 590 3.0E-8 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Pfam PF10531 SLBB domain 281 327 2.3E-11 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Pfam PF06251 Capsule biosynthesis GfcC 651 852 1.7E-11 T 29-03-2018 IPR010425 Domain of unknown function DUF1017 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 SUPERFAMILY SSF142984 281 315 7.72E-5 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 SUPERFAMILY SSF142984 641 675 9.55E-5 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Pfam PF02563 Polysaccharide biosynthesis/export protein 117 185 1.3E-13 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Gene3D G3DSA:3.10.560.10 278 358 5.7E-15 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Gene3D G3DSA:3.10.560.10 630 771 3.6E-17 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Gene3D G3DSA:3.10.560.10 772 851 1.3E-9 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Gene3D G3DSA:3.30.1950.10 125 185 7.9E-11 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Gene3D G3DSA:3.10.560.10 186 276 1.6E-18 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Gene3D G3DSA:3.10.560.10 359 450 8.1E-11 T 29-03-2018 AL539_RS13305 5c773aadce92608ae19f0d2112b5bf04 879 Gene3D G3DSA:3.10.560.10 533 629 8.9E-15 T 29-03-2018 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 Gene3D G3DSA:2.30.42.10 254 354 3.0E-23 T 29-03-2018 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 Gene3D G3DSA:2.40.10.10 148 250 3.8E-33 T 29-03-2018 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 9.0E-47 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 9.0E-47 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.0E-47 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.0E-47 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.0E-47 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 9.0E-47 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 SMART SM00228 256 338 2.9E-6 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 SUPERFAMILY SSF50156 239 346 1.84E-20 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 SUPERFAMILY SSF50494 43 265 5.15E-62 T 29-03-2018 IPR009003 Peptidase S1, PA clan AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 1.2E-32 T 29-03-2018 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 6.7E-166 T 29-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 Pfam PF13180 PDZ domain 257 346 3.1E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS14440 9c6c9464eb3ff014b3fcdf98effee83d 354 Gene3D G3DSA:2.40.10.10 44 147 2.5E-36 T 29-03-2018 AL539_RS10925 399898e9ed1aa938ab05a33a31ccb470 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 1.9E-179 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL539_RS10925 399898e9ed1aa938ab05a33a31ccb470 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 3.5E-145 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL539_RS10925 399898e9ed1aa938ab05a33a31ccb470 435 PIRSF PIRSF004539 1 435 5.6E-177 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.527 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.3E-108 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.7E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.7E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.7E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.7E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 Gene3D G3DSA:3.20.20.70 1 291 3.3E-93 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 SMART SM01130 1 290 1.2E-140 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 2.6E-117 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 SUPERFAMILY SSF51569 2 289 1.57E-100 T 29-03-2018 AL539_RS07525 3c84417114837d14a1851dbfab1f5c23 292 PIRSF PIRSF001365 1 291 2.6E-94 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AL539_RS06875 ad99304960418465e9ed6e5ef3bc8366 438 Gene3D G3DSA:1.20.1250.20 250 431 1.7E-9 T 29-03-2018 AL539_RS06875 ad99304960418465e9ed6e5ef3bc8366 438 Pfam PF07690 Major Facilitator Superfamily 40 399 4.2E-16 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS06875 ad99304960418465e9ed6e5ef3bc8366 438 SUPERFAMILY SSF103473 37 430 5.89E-28 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS06875 ad99304960418465e9ed6e5ef3bc8366 438 Gene3D G3DSA:1.20.1250.20 34 232 6.7E-13 T 29-03-2018 AL539_RS24835 ae9a28178bb8fcdb27e2018ffef7fe03 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 258 3.8E-53 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL539_RS24835 ae9a28178bb8fcdb27e2018ffef7fe03 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 221 1.3E-28 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL539_RS24835 ae9a28178bb8fcdb27e2018ffef7fe03 263 SUPERFAMILY SSF54506 1 262 9.74E-73 T 29-03-2018 AL539_RS24835 ae9a28178bb8fcdb27e2018ffef7fe03 263 PIRSF PIRSF016184 1 263 9.3E-50 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL539_RS24835 ae9a28178bb8fcdb27e2018ffef7fe03 263 Gene3D G3DSA:3.10.310.10 1 125 6.2E-29 T 29-03-2018 AL539_RS24835 ae9a28178bb8fcdb27e2018ffef7fe03 263 Gene3D G3DSA:3.10.310.10 126 251 7.6E-31 T 29-03-2018 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 29-03-2018 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 199 256 2.3E-27 T 29-03-2018 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 164 198 5.0E-4 T 29-03-2018 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 29-03-2018 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 257 321 1.8E-8 T 29-03-2018 AL539_RS10040 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 8 163 3.8E-43 T 29-03-2018 AL539_RS19200 c3da32b89e7926000b1ac130c163df27 314 Gene3D G3DSA:1.10.1580.10 179 278 2.4E-22 T 29-03-2018 IPR023179 GTP-binding protein, orthogonal bundle domain AL539_RS19200 c3da32b89e7926000b1ac130c163df27 314 PIRSF PIRSF006230 2 280 8.6E-105 T 29-03-2018 IPR016478 GTPase, MTG1 AL539_RS19200 c3da32b89e7926000b1ac130c163df27 314 Pfam PF01926 50S ribosome-binding GTPase 120 186 3.3E-14 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS19200 c3da32b89e7926000b1ac130c163df27 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 9.0E-107 T 29-03-2018 IPR019991 GTP-binding protein, ribosome biogenesis AL539_RS19200 c3da32b89e7926000b1ac130c163df27 314 SUPERFAMILY SSF52540 12 186 2.7E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19200 c3da32b89e7926000b1ac130c163df27 314 Gene3D G3DSA:1.20.120.430 13 178 5.0E-27 T 29-03-2018 AL539_RS09885 c81500cd1f66a5aebc01d48124f4b2d2 84 PIRSF PIRSF003113 2 83 2.0E-22 T 29-03-2018 IPR002634 BolA protein AL539_RS09885 c81500cd1f66a5aebc01d48124f4b2d2 84 Gene3D G3DSA:3.30.300.90 1 83 3.0E-25 T 29-03-2018 AL539_RS09885 c81500cd1f66a5aebc01d48124f4b2d2 84 SUPERFAMILY SSF82657 4 82 2.35E-28 T 29-03-2018 IPR002634 BolA protein AL539_RS09885 c81500cd1f66a5aebc01d48124f4b2d2 84 Pfam PF01722 BolA-like protein 18 74 9.6E-15 T 29-03-2018 IPR002634 BolA protein AL539_RS04245 714231e95974dd56e0819fef2885dd48 112 SMART SM00530 10 69 3.6E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS04245 714231e95974dd56e0819fef2885dd48 112 SUPERFAMILY SSF47413 5 75 1.49E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS04245 714231e95974dd56e0819fef2885dd48 112 Gene3D G3DSA:1.10.260.40 7 102 2.6E-18 T 29-03-2018 AL539_RS04245 714231e95974dd56e0819fef2885dd48 112 Pfam PF12844 Helix-turn-helix domain 10 70 4.9E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS20310 2afe2a991b2898f055a93f16c842317f 589 SUPERFAMILY SSF58104 278 586 1.96E-69 T 29-03-2018 AL539_RS20310 2afe2a991b2898f055a93f16c842317f 589 Gene3D G3DSA:1.10.287.950 346 557 3.7E-50 T 29-03-2018 AL539_RS20310 2afe2a991b2898f055a93f16c842317f 589 SMART SM00283 324 585 3.0E-62 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS20310 2afe2a991b2898f055a93f16c842317f 589 Gene3D G3DSA:1.20.58.60 64 345 4.5E-5 T 29-03-2018 AL539_RS20310 2afe2a991b2898f055a93f16c842317f 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 552 3.4E-40 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 29-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 SUPERFAMILY SSF53738 305 446 8.24E-31 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 2.4E-40 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Gene3D G3DSA:3.40.120.10 213 325 1.9E-21 T 29-03-2018 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 SUPERFAMILY SSF55957 433 543 2.96E-19 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.3E-28 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Gene3D G3DSA:3.40.120.10 326 443 1.3E-26 T 29-03-2018 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 SUPERFAMILY SSF53738 209 317 1.77E-8 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Gene3D G3DSA:3.30.310.50 444 546 7.3E-21 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 2.5E-8 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Gene3D G3DSA:3.40.120.10 12 212 4.0E-48 T 29-03-2018 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 SUPERFAMILY SSF53738 27 235 6.83E-52 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.0E-17 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS16750 9bd42788dfd5de4d760e072a02329eb8 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL539_RS10030 aba33e1f2d20c1489dfbb5505e8cd494 162 PIRSF PIRSF018472 1 162 6.7E-42 T 29-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AL539_RS10030 aba33e1f2d20c1489dfbb5505e8cd494 162 Pfam PF04093 rod shape-determining protein MreD 9 154 4.6E-40 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL539_RS10030 aba33e1f2d20c1489dfbb5505e8cd494 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.3E-36 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL539_RS13760 e3301d51ea0ea23071d3589ecdcda0f1 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 1.3E-67 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS13760 e3301d51ea0ea23071d3589ecdcda0f1 212 Gene3D G3DSA:3.30.1060.10 24 203 3.6E-80 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS13760 e3301d51ea0ea23071d3589ecdcda0f1 212 SUPERFAMILY SSF55068 3 207 3.92E-80 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS13760 e3301d51ea0ea23071d3589ecdcda0f1 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 1.2E-67 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS13760 e3301d51ea0ea23071d3589ecdcda0f1 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.25 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL539_RS06625 ca927ab60fed1718ba786df1cbf59d02 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.5E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS06625 ca927ab60fed1718ba786df1cbf59d02 306 Gene3D G3DSA:1.10.3720.10 2 294 3.8E-42 T 29-03-2018 AL539_RS06625 ca927ab60fed1718ba786df1cbf59d02 306 SUPERFAMILY SSF161098 88 291 1.85E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS03100 32f1afa5ada9104bd9049baa007c96c0 157 Pfam PF00072 Response regulator receiver domain 6 125 9.9E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03100 32f1afa5ada9104bd9049baa007c96c0 157 SUPERFAMILY SSF52172 1 131 2.7E-20 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS03100 32f1afa5ada9104bd9049baa007c96c0 157 Gene3D G3DSA:3.40.50.2300 1 149 8.1E-19 T 29-03-2018 AL539_RS03100 32f1afa5ada9104bd9049baa007c96c0 157 SMART SM00448 4 125 6.5E-12 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 PRINTS PR00110 Alpha-amylase signature 230 248 2.2E-15 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 PRINTS PR00110 Alpha-amylase signature 88 99 2.2E-15 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 PRINTS PR00110 Alpha-amylase signature 55 72 2.2E-15 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 PRINTS PR00110 Alpha-amylase signature 201 212 2.2E-15 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 PRINTS PR00110 Alpha-amylase signature 296 308 2.2E-15 T 29-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 SMART SM00642 13 374 5.5E-23 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 Gene3D G3DSA:3.20.20.80 9 378 9.1E-48 T 29-03-2018 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 Gene3D G3DSA:2.60.40.1180 379 445 1.7E-4 T 29-03-2018 AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 SUPERFAMILY SSF51445 10 344 2.39E-62 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS24700 7321556e0dcbf3e54674a3b36b439800 449 Pfam PF00128 Alpha amylase, catalytic domain 28 238 1.1E-16 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS03865 a4abe8bb68a25ec83a228c82b8560f7f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.377 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS03865 a4abe8bb68a25ec83a228c82b8560f7f 172 Gene3D G3DSA:3.10.129.10 1 172 7.8E-49 T 29-03-2018 AL539_RS03865 a4abe8bb68a25ec83a228c82b8560f7f 172 SUPERFAMILY SSF54637 4 169 5.47E-57 T 29-03-2018 IPR029069 HotDog domain AL539_RS03865 a4abe8bb68a25ec83a228c82b8560f7f 172 Pfam PF07977 FabA-like domain 29 158 3.0E-54 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS03865 a4abe8bb68a25ec83a228c82b8560f7f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.3E-92 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS19645 bdb1696f7b8901fbe06871e42f49c1a3 128 SMART SM00422 4 71 1.5E-21 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19645 bdb1696f7b8901fbe06871e42f49c1a3 128 SUPERFAMILY SSF46955 4 117 2.97E-26 T 29-03-2018 IPR009061 Putative DNA-binding domain AL539_RS19645 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF09278 MerR, DNA binding 47 110 6.0E-17 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AL539_RS19645 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF00376 MerR family regulatory protein 5 40 7.1E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL539_RS19645 bdb1696f7b8901fbe06871e42f49c1a3 128 Gene3D G3DSA:1.10.1660.10 57 127 1.3E-14 T 29-03-2018 AL539_RS19645 bdb1696f7b8901fbe06871e42f49c1a3 128 Gene3D G3DSA:1.10.1660.10 1 56 2.7E-19 T 29-03-2018 AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 SUPERFAMILY SSF51338 1 72 4.46E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 SUPERFAMILY SSF51338 373 411 4.46E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 Pfam PF01979 Amidohydrolase family 69 408 2.4E-16 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.314 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 SUPERFAMILY SSF51556 72 371 4.44E-82 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 Gene3D G3DSA:3.20.20.140 88 371 9.7E-53 T 29-03-2018 AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 Gene3D G3DSA:2.30.40.10 2 87 2.4E-20 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS02245 a9621afd6784ed5a0e68771d7e8f5ea5 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 1.1E-150 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL539_RS15065 defcae243fc49e4dfaa5314534165cb4 242 SUPERFAMILY SSF48452 30 119 6.07E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS15065 defcae243fc49e4dfaa5314534165cb4 242 Gene3D G3DSA:1.25.20.10 30 241 6.7E-16 T 29-03-2018 AL539_RS15065 defcae243fc49e4dfaa5314534165cb4 242 Pfam PF13525 Outer membrane lipoprotein 26 234 2.0E-79 T 29-03-2018 AL539_RS15065 defcae243fc49e4dfaa5314534165cb4 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.44 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD AL539_RS15065 defcae243fc49e4dfaa5314534165cb4 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 9.3E-80 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD AL539_RS14370 46f78949d3bd12b9f927868899fc36bf 419 Pfam PF01384 Phosphate transporter family 26 407 9.9E-113 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.9E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.9E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.7E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 SUPERFAMILY SSF64288 56 232 2.04E-47 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 Pfam PF07702 UTRA domain 89 226 2.7E-38 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 SMART SM00345 8 67 8.0E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 Gene3D G3DSA:1.10.10.10 1 72 8.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 SMART SM00866 88 227 1.2E-34 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 SUPERFAMILY SSF46785 3 71 1.52E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS19850 8b45c3c17123e05cf4423b5d3aebc750 235 Gene3D G3DSA:3.40.1410.10 73 235 8.7E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.694 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.9E-164 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.3E-49 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.3E-49 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.3E-49 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.3E-49 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.3E-49 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.3E-49 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 3.9E-63 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 Gene3D G3DSA:3.90.226.10 30 316 7.1E-67 T 29-03-2018 AL539_RS07685 ccba6b51aabf49b4329d44b68035a781 319 SUPERFAMILY SSF52096 5 318 2.3E-105 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS24550 a334b59b3ca87b1cee9de1e586d380a4 248 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 169 246 7.0E-22 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL539_RS24550 a334b59b3ca87b1cee9de1e586d380a4 248 Gene3D G3DSA:3.30.1150.10 50 248 9.4E-20 T 29-03-2018 AL539_RS24550 a334b59b3ca87b1cee9de1e586d380a4 248 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 170 246 5.9E-22 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL539_RS24550 a334b59b3ca87b1cee9de1e586d380a4 248 SUPERFAMILY SSF74653 168 244 9.94E-22 T 29-03-2018 AL539_RS12130 97b8817f5529b37b3bc394b8b371c702 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 242 2.0E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS12130 97b8817f5529b37b3bc394b8b371c702 246 SUPERFAMILY SSF161098 41 227 4.58E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS12130 97b8817f5529b37b3bc394b8b371c702 246 Gene3D G3DSA:1.10.3720.10 1 245 4.6E-46 T 29-03-2018 AL539_RS12130 97b8817f5529b37b3bc394b8b371c702 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 6.7E-29 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS23570 423a46851e8eb62521d63c9bdc606438 142 Pfam PF10990 Protein of unknown function (DUF2809) 50 132 4.6E-24 T 29-03-2018 IPR021257 Protein of unknown function DUF2809 AL539_RS20265 d70b4f3feef540026160dd3a25db13ad 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL539_RS20265 d70b4f3feef540026160dd3a25db13ad 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL539_RS20265 d70b4f3feef540026160dd3a25db13ad 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.7E-101 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL539_RS20265 d70b4f3feef540026160dd3a25db13ad 316 SUPERFAMILY SSF51569 1 315 2.41E-114 T 29-03-2018 AL539_RS20265 d70b4f3feef540026160dd3a25db13ad 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.915 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL539_RS20265 d70b4f3feef540026160dd3a25db13ad 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 7.3E-155 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AL539_RS20265 d70b4f3feef540026160dd3a25db13ad 316 Gene3D G3DSA:3.20.20.70 2 316 1.1E-119 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS17020 d5fc703d0565f725ccf050f015599793 85 Gene3D G3DSA:1.10.1200.10 1 85 1.5E-17 T 29-03-2018 AL539_RS17020 d5fc703d0565f725ccf050f015599793 85 SUPERFAMILY SSF47336 4 83 1.57E-18 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL539_RS17020 d5fc703d0565f725ccf050f015599793 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 6.0E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AL539_RS17020 d5fc703d0565f725ccf050f015599793 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.639 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL539_RS21680 30026e5d0516ad62c5dfca9baeb05a51 179 Pfam PF00293 NUDIX domain 44 153 5.7E-6 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS21680 30026e5d0516ad62c5dfca9baeb05a51 179 SUPERFAMILY SSF55811 4 176 4.33E-37 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS21680 30026e5d0516ad62c5dfca9baeb05a51 179 Gene3D G3DSA:3.90.79.10 4 177 1.7E-28 T 29-03-2018 AL539_RS00675 1e7ceeb79fedf55ea6d8f62711a0835d 117 Pfam PF05717 IS66 Orf2 like protein 9 103 2.2E-33 T 29-03-2018 IPR008878 Transposase IS66, Orf2 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 SUPERFAMILY SSF103190 51 184 8.37E-18 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 SUPERFAMILY SSF58104 314 623 1.31E-74 T 29-03-2018 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 589 1.0E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 Pfam PF02743 Cache domain 33 255 1.3E-34 T 29-03-2018 IPR033479 Double Cache domain 1 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 Pfam PF00672 HAMP domain 292 343 1.5E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 Gene3D G3DSA:3.30.450.20 160 271 8.8E-25 T 29-03-2018 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 Gene3D G3DSA:1.10.287.950 278 395 1.9E-7 T 29-03-2018 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 Gene3D G3DSA:1.10.287.950 396 623 1.4E-50 T 29-03-2018 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 SMART SM00283 361 622 1.1E-68 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 SMART SM00304 292 346 2.9E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS24930 9e67df4dba4f246f50d882c40a87178a 623 Gene3D G3DSA:3.30.450.20 18 159 1.5E-21 T 29-03-2018 AL539_RS21030 c39d5fec2dfb56eb7e3704979154b760 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 219 1.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS21030 c39d5fec2dfb56eb7e3704979154b760 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 235 247 1.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS21030 c39d5fec2dfb56eb7e3704979154b760 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 235 1.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS21030 c39d5fec2dfb56eb7e3704979154b760 268 SMART SM00421 202 259 4.3E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS21030 c39d5fec2dfb56eb7e3704979154b760 268 Gene3D G3DSA:1.10.10.10 59 268 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21030 c39d5fec2dfb56eb7e3704979154b760 268 SUPERFAMILY SSF46894 194 262 1.26E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS21030 c39d5fec2dfb56eb7e3704979154b760 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 204 258 2.6E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 Gene3D G3DSA:3.40.50.720 4 247 1.8E-59 T 29-03-2018 AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 SUPERFAMILY SSF51735 5 244 2.47E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.2E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.2E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.2E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.2E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.2E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.2E-52 T 29-03-2018 AL539_RS20945 e529d8bcf46a50e18027234d5fe81455 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS25080 cc7e645f117c86d926686dfa684ed72c 339 Pfam PF02628 Cytochrome oxidase assembly protein 7 315 1.2E-82 T 29-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 SUPERFAMILY SSF89000 297 462 1.22E-52 T 29-03-2018 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 Pfam PF00682 HMGL-like 6 270 6.3E-60 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 Pfam PF02436 Conserved carboxylase domain 292 493 7.3E-60 T 29-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 Gene3D G3DSA:3.20.20.70 1 284 1.0E-76 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 SUPERFAMILY SSF51569 1 300 3.85E-90 T 29-03-2018 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 Pfam PF00364 Biotin-requiring enzyme 528 593 6.7E-17 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 SUPERFAMILY SSF51230 519 593 1.44E-20 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 Gene3D G3DSA:2.40.50.100 521 594 5.2E-20 T 29-03-2018 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 1.2E-268 T 29-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AL539_RS08840 e5f571442659d174e7d6e562825335dc 594 Gene3D G3DSA:1.10.10.60 399 453 6.3E-16 T 29-03-2018 AL539_RS24190 79ef5a413cf34e50bd8e0b682f8bb4f9 261 SUPERFAMILY SSF52540 3 230 1.13E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24190 79ef5a413cf34e50bd8e0b682f8bb4f9 261 SMART SM00382 26 214 1.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24190 79ef5a413cf34e50bd8e0b682f8bb4f9 261 Gene3D G3DSA:3.40.50.300 1 237 1.8E-54 T 29-03-2018 AL539_RS24190 79ef5a413cf34e50bd8e0b682f8bb4f9 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS24190 79ef5a413cf34e50bd8e0b682f8bb4f9 261 Pfam PF00005 ABC transporter 22 166 1.2E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 Gene3D G3DSA:1.10.287.950 191 294 1.1E-4 T 29-03-2018 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 Gene3D G3DSA:1.10.287.950 295 519 5.3E-41 T 29-03-2018 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 SMART SM00091 8 75 0.0017 T 29-03-2018 IPR000014 PAS domain AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 SMART SM00283 257 518 1.0E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 SUPERFAMILY SSF58104 263 517 3.53E-58 T 29-03-2018 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 Gene3D G3DSA:3.40.50.10600 2 146 4.1E-30 T 29-03-2018 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 Pfam PF08447 PAS fold 31 114 5.3E-14 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 484 9.6E-34 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 SUPERFAMILY SSF55785 18 114 1.68E-25 T 29-03-2018 IPR000014 PAS domain AL539_RS20275 9be094b031003e725a7c9a57bc7898ef 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 112 2.8E-13 T 29-03-2018 IPR000014 PAS domain AL539_RS01710 e12758b3ab85e3846cc8314c6ba53f7e 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 4.5E-42 T 29-03-2018 IPR013468 Conserved hypothetical protein CHP02647 AL539_RS01710 e12758b3ab85e3846cc8314c6ba53f7e 77 Pfam PF06146 Phosphate-starvation-inducible E 8 68 1.7E-10 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL539_RS03860 622c528218ecbf866121db1a018d5339 546 SUPERFAMILY SSF54211 314 506 4.93E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS03860 622c528218ecbf866121db1a018d5339 546 Gene3D G3DSA:3.30.230.10 295 532 1.0E-30 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS03860 622c528218ecbf866121db1a018d5339 546 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 505 2.3E-10 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL539_RS03860 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.3E-10 T 29-03-2018 AL539_RS03860 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.3E-10 T 29-03-2018 AL539_RS03860 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.3E-10 T 29-03-2018 AL539_RS03860 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.3E-10 T 29-03-2018 AL539_RS03860 622c528218ecbf866121db1a018d5339 546 Pfam PF13654 AAA domain 107 288 1.3E-23 T 29-03-2018 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.3E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.3E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.3E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.3E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.3E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.3E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 SUPERFAMILY SSF53335 76 269 1.05E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 Gene3D G3DSA:3.40.50.150 75 274 4.7E-47 T 29-03-2018 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 Gene3D G3DSA:1.10.155.10 1 74 4.2E-12 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 SMART SM00138 8 272 1.6E-131 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL539_RS16450 68f96dff178ff79656a033031893f5a1 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.1E-68 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL539_RS10210 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 29-03-2018 IPR028976 CheC-like domain AL539_RS10210 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.7E-33 T 29-03-2018 IPR028976 CheC-like domain AL539_RS10210 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 29-03-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AL539_RS16990 578eb7294bb603ab022e0f6ad9955ebd 148 SUPERFAMILY SSF54637 10 143 3.28E-30 T 29-03-2018 IPR029069 HotDog domain AL539_RS16990 578eb7294bb603ab022e0f6ad9955ebd 148 Pfam PF13279 Thioesterase-like superfamily 19 124 2.6E-12 T 29-03-2018 AL539_RS16990 578eb7294bb603ab022e0f6ad9955ebd 148 Gene3D G3DSA:3.10.129.10 9 146 4.6E-25 T 29-03-2018 AL539_RS01080 bd3f9ffabce62ff59d73adbe4d3238d9 76 Pfam PF01206 Sulfurtransferase TusA 7 74 1.2E-25 T 29-03-2018 IPR001455 TusA-like domain AL539_RS01080 bd3f9ffabce62ff59d73adbe4d3238d9 76 SUPERFAMILY SSF64307 3 74 1.96E-25 T 29-03-2018 IPR001455 TusA-like domain AL539_RS01080 bd3f9ffabce62ff59d73adbe4d3238d9 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 29-03-2018 IPR001455 TusA-like domain AL539_RS01080 bd3f9ffabce62ff59d73adbe4d3238d9 76 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 1 76 24.4 T 29-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AL539_RS01080 bd3f9ffabce62ff59d73adbe4d3238d9 76 Gene3D G3DSA:3.30.110.40 1 76 9.8E-29 T 29-03-2018 IPR001455 TusA-like domain AL539_RS25705 f3b1b7a49afe2f3ac7c13715c34cf542 534 Pfam PF01039 Carboxyl transferase domain 48 524 1.4E-147 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL539_RS25705 f3b1b7a49afe2f3ac7c13715c34cf542 534 Gene3D G3DSA:3.90.226.10 10 273 5.0E-66 T 29-03-2018 AL539_RS25705 f3b1b7a49afe2f3ac7c13715c34cf542 534 SUPERFAMILY SSF52096 276 534 1.74E-84 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS25705 f3b1b7a49afe2f3ac7c13715c34cf542 534 Gene3D G3DSA:3.90.226.10 274 530 1.0E-69 T 29-03-2018 AL539_RS25705 f3b1b7a49afe2f3ac7c13715c34cf542 534 SUPERFAMILY SSF52096 23 265 2.34E-70 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS06505 c222997c817430f69e26432e22ffb0d8 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.576 T 29-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein AL539_RS06505 c222997c817430f69e26432e22ffb0d8 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 29-03-2018 IPR000808 Mrp, conserved site GO:0005524 AL539_RS06505 c222997c817430f69e26432e22ffb0d8 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 6.4E-99 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL539_RS06505 c222997c817430f69e26432e22ffb0d8 358 SUPERFAMILY SSF52540 88 318 2.88E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06505 c222997c817430f69e26432e22ffb0d8 358 Gene3D G3DSA:3.40.50.300 79 315 6.1E-63 T 29-03-2018 AL539_RS26120 0537fe8d7f4311f1bf453aff5881a5ea 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 144 1.0E-39 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL539_RS26120 0537fe8d7f4311f1bf453aff5881a5ea 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 146 2.0E-49 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 137 7.5E-17 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 Pfam PF00557 Metallopeptidase family M24 324 526 1.1E-41 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 1.5E-39 T 29-03-2018 AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 Gene3D G3DSA:3.40.350.10 2 151 1.3E-44 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 SUPERFAMILY SSF53092 166 251 7.5E-5 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 9.4E-21 T 29-03-2018 IPR032416 Peptidase M24, C-terminal domain AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 Gene3D G3DSA:3.90.230.10 320 556 3.9E-57 T 29-03-2018 AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 Gene3D G3DSA:3.40.350.10 157 319 2.8E-19 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 SUPERFAMILY SSF55920 308 562 7.07E-50 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS02535 0c6ff9f9e2fe10cbea5013d0f70c6f14 598 SUPERFAMILY SSF53092 14 141 5.76E-12 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AL539_RS12430 61af94c29d2354df719e59d9447850f0 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 4.9E-77 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS12430 61af94c29d2354df719e59d9447850f0 367 Gene3D G3DSA:3.90.1170.30 41 112 7.5E-4 T 29-03-2018 AL539_RS12430 61af94c29d2354df719e59d9447850f0 367 Gene3D G3DSA:1.20.1600.10 113 291 2.4E-28 T 29-03-2018 AL539_RS12430 61af94c29d2354df719e59d9447850f0 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 268 1.2E-29 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS12430 61af94c29d2354df719e59d9447850f0 367 SUPERFAMILY SSF111369 57 272 7.32E-43 T 29-03-2018 AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 Gene3D G3DSA:2.30.30.240 102 177 9.8E-22 T 29-03-2018 AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.743 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 Gene3D G3DSA:2.40.30.60 12 100 3.1E-26 T 29-03-2018 IPR002676 RimM protein GO:0006364 AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 Pfam PF05239 PRC-barrel domain 103 177 9.7E-12 T 29-03-2018 IPR027275 PRC-barrel domain AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 SUPERFAMILY SSF50346 106 182 4.51E-20 T 29-03-2018 IPR011033 PRC-barrel-like AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.4E-55 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 SUPERFAMILY SSF50447 13 100 9.18E-24 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS08780 7c29242eb73d252655ca6c957d6d1b5c 182 Pfam PF01782 RimM N-terminal domain 15 95 7.6E-25 T 29-03-2018 IPR002676 RimM protein GO:0006364 AL539_RS25115 dae6e44d2760b78f521b1c4188936a41 181 Gene3D G3DSA:3.10.640.10 1 172 8.6E-64 T 29-03-2018 AL539_RS25115 dae6e44d2760b78f521b1c4188936a41 181 SUPERFAMILY SSF52980 2 176 1.69E-61 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS25115 dae6e44d2760b78f521b1c4188936a41 181 Pfam PF07152 YaeQ protein 1 171 3.1E-63 T 29-03-2018 IPR009822 YaeQ AL539_RS25115 dae6e44d2760b78f521b1c4188936a41 181 PIRSF PIRSF011484 1 179 4.4E-62 T 29-03-2018 IPR009822 YaeQ AL539_RS25115 dae6e44d2760b78f521b1c4188936a41 181 SMART SM01322 1 174 1.2E-95 T 29-03-2018 IPR009822 YaeQ AL539_RS05275 dd9ce9b29b5d027df9f0edf4e08dca6c 50 Pfam PF11665 Protein of unknown function (DUF3265) 23 50 1.2E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 5.9E-113 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 1.1E-21 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.4E-44 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.0E-17 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.0E-17 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.0E-17 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.0E-17 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 SMART SM00846 127 288 2.5E-52 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 SUPERFAMILY SSF55347 288 451 1.93E-52 T 29-03-2018 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 Gene3D G3DSA:3.40.50.720 123 297 1.5E-48 T 29-03-2018 AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 SUPERFAMILY SSF51735 128 304 7.04E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS20525 02a8d97e15e1f8de1a2a8304e87da01e 477 Gene3D G3DSA:3.30.360.10 298 452 4.8E-48 T 29-03-2018 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 55 116 4.1E-29 T 29-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 29-03-2018 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS02280 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS07895 e97ecaec34a2602ad4a62710615d396b 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS07895 e97ecaec34a2602ad4a62710615d396b 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS07895 e97ecaec34a2602ad4a62710615d396b 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS07895 e97ecaec34a2602ad4a62710615d396b 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 9.0E-26 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS07895 e97ecaec34a2602ad4a62710615d396b 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 132 3.8E-22 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL539_RS07895 e97ecaec34a2602ad4a62710615d396b 454 SUPERFAMILY SSF161070 10 453 1.01E-118 T 29-03-2018 AL539_RS08125 2dbc8b3892c3a3698f5d4009338c648d 99 Pfam PF07130 YebG protein 1 72 1.5E-31 T 29-03-2018 IPR009813 Uncharacterised protein family YebG AL539_RS08125 2dbc8b3892c3a3698f5d4009338c648d 99 Gene3D G3DSA:1.10.10.710 22 85 3.8E-22 T 29-03-2018 AL539_RS15975 c21a414d68813188524efc7fa16bf240 458 Pfam PF03641 Possible lysine decarboxylase 187 326 1.5E-35 T 29-03-2018 IPR031100 LOG family AL539_RS15975 c21a414d68813188524efc7fa16bf240 458 Gene3D G3DSA:3.40.50.450 121 450 1.4E-99 T 29-03-2018 AL539_RS15975 c21a414d68813188524efc7fa16bf240 458 Gene3D G3DSA:3.30.1850.10 3 111 4.3E-52 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 AL539_RS15975 c21a414d68813188524efc7fa16bf240 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 2.1E-56 T 29-03-2018 IPR021826 Domain of unknown function DUF3412 AL539_RS15975 c21a414d68813188524efc7fa16bf240 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 7.3E-51 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 AL539_RS15975 c21a414d68813188524efc7fa16bf240 458 SUPERFAMILY SSF102405 119 327 1.02E-41 T 29-03-2018 AL539_RS07995 64bfdb2115a436b3cbe84032dc70a39d 450 SUPERFAMILY SSF103473 11 436 1.57E-32 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS07995 64bfdb2115a436b3cbe84032dc70a39d 450 Pfam PF07690 Major Facilitator Superfamily 24 397 2.0E-16 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS07995 64bfdb2115a436b3cbe84032dc70a39d 450 Gene3D G3DSA:1.20.1250.20 245 450 7.7E-14 T 29-03-2018 AL539_RS07995 64bfdb2115a436b3cbe84032dc70a39d 450 Gene3D G3DSA:1.20.1250.20 5 225 4.2E-17 T 29-03-2018 AL539_RS25000 181542b8f42a7dda09e8e9f4c1769b92 323 Gene3D G3DSA:2.40.160.10 10 323 3.0E-40 T 29-03-2018 AL539_RS25000 181542b8f42a7dda09e8e9f4c1769b92 323 SUPERFAMILY SSF56935 22 323 2.66E-50 T 29-03-2018 AL539_RS25000 181542b8f42a7dda09e8e9f4c1769b92 323 Pfam PF13609 Gram-negative porin 11 293 5.5E-27 T 29-03-2018 AL539_RS07600 364dfe806394f2099bdf4e1895ea698d 191 Pfam PF13580 SIS domain 12 146 9.5E-30 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS07600 364dfe806394f2099bdf4e1895ea698d 191 SUPERFAMILY SSF53697 1 189 4.45E-51 T 29-03-2018 AL539_RS07600 364dfe806394f2099bdf4e1895ea698d 191 Gene3D G3DSA:3.40.50.10490 1 191 5.7E-40 T 29-03-2018 AL539_RS07600 364dfe806394f2099bdf4e1895ea698d 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.527 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL539_RS07600 364dfe806394f2099bdf4e1895ea698d 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 5.3E-81 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL539_RS09955 6a68cbd81f7a8c61dc811d4fc0841f17 287 PIRSF PIRSF005052 1 286 1.3E-105 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AL539_RS09955 6a68cbd81f7a8c61dc811d4fc0841f17 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.745 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AL539_RS09955 6a68cbd81f7a8c61dc811d4fc0841f17 287 Gene3D G3DSA:3.40.50.300 1 155 7.3E-13 T 29-03-2018 AL539_RS09955 6a68cbd81f7a8c61dc811d4fc0841f17 287 Pfam PF03668 P-loop ATPase protein family 1 284 2.9E-109 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AL539_RS09955 6a68cbd81f7a8c61dc811d4fc0841f17 287 SUPERFAMILY SSF52540 2 151 1.15E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11450 20ddf5c69983250983c979dc1c424b49 224 SMART SM00382 27 215 4.9E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS11450 20ddf5c69983250983c979dc1c424b49 224 Pfam PF00005 ABC transporter 18 165 2.4E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS11450 20ddf5c69983250983c979dc1c424b49 224 SUPERFAMILY SSF52540 1 220 3.59E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS11450 20ddf5c69983250983c979dc1c424b49 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS11450 20ddf5c69983250983c979dc1c424b49 224 Gene3D G3DSA:3.40.50.300 1 223 1.9E-60 T 29-03-2018 AL539_RS11450 20ddf5c69983250983c979dc1c424b49 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.6E-90 T 29-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AL539_RS23295 d76dd5c4e1806db5f633a768722d227e 686 Gene3D G3DSA:2.60.40.1180 652 685 0.05 T 29-03-2018 AL539_RS23295 d76dd5c4e1806db5f633a768722d227e 686 Gene3D G3DSA:3.20.20.80 194 651 3.6E-88 T 29-03-2018 AL539_RS23295 d76dd5c4e1806db5f633a768722d227e 686 SMART SM00642 203 646 6.6E-94 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23295 d76dd5c4e1806db5f633a768722d227e 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 1.9E-52 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23295 d76dd5c4e1806db5f633a768722d227e 686 SUPERFAMILY SSF51445 148 655 2.9E-94 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23295 d76dd5c4e1806db5f633a768722d227e 686 PIRSF PIRSF036917 1 685 0.0 T 29-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AL539_RS23295 d76dd5c4e1806db5f633a768722d227e 686 Gene3D G3DSA:2.60.40.1180 128 181 0.022 T 29-03-2018 AL539_RS21465 0334f1e9ff2346aa1a473394f487bf94 227 Pfam PF13861 FlgD Tudor-like domain 94 223 5.3E-11 T 29-03-2018 IPR025963 FlgD Tudor-like domain AL539_RS21465 0334f1e9ff2346aa1a473394f487bf94 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 85 2.3E-17 T 29-03-2018 IPR005648 Flagellar hook capping protein AL539_RS21465 0334f1e9ff2346aa1a473394f487bf94 227 Pfam PF13860 FlgD Ig-like domain 114 182 2.9E-8 T 29-03-2018 IPR025965 FlgD Ig-like domain AL539_RS23735 ff7cdfa67e01c96881510cda5ac056e9 251 Pfam PF02108 Flagellar assembly protein FliH 106 228 3.2E-28 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL539_RS23735 ff7cdfa67e01c96881510cda5ac056e9 251 SUPERFAMILY SSF160527 132 241 2.75E-6 T 29-03-2018 AL539_RS22115 be7d44b6d6e30a049101551244d453dd 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 1.3E-65 T 29-03-2018 IPR021438 Protein of unknown function DUF3087 AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 4.0E-38 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 Gene3D G3DSA:3.40.50.2300 1 149 6.8E-48 T 29-03-2018 AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 SUPERFAMILY SSF52788 1 149 2.09E-48 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.3E-24 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.3E-24 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 1.3E-24 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.3E-24 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.3E-24 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS06485 faa8f1f0a548c98b407a1dd24e013c2e 149 SMART SM00226 2 148 1.3E-44 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 11 239 1.5E-80 T 29-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 Gene3D G3DSA:1.25.40.10 99 123 3.5E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 Gene3D G3DSA:1.25.40.10 31 98 8.8E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 SUPERFAMILY SSF81901 34 201 2.88E-21 T 29-03-2018 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 SMART SM00028 143 176 0.81 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 SMART SM00028 107 140 35.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 SMART SM00028 39 72 48.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 SMART SM00028 73 106 37.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 Gene3D G3DSA:1.25.40.10 124 241 5.7E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02865 ff413c04667a0cbbe6d2b3007ae4e0fe 241 Pfam PF13431 Tetratricopeptide repeat 95 127 2.1E-5 T 29-03-2018 AL539_RS17390 62483a1a0f85976c39144192779cfd01 293 Pfam PF01636 Phosphotransferase enzyme family 30 231 4.5E-12 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AL539_RS17390 62483a1a0f85976c39144192779cfd01 293 Gene3D G3DSA:3.90.1200.10 63 277 6.8E-22 T 29-03-2018 AL539_RS17390 62483a1a0f85976c39144192779cfd01 293 SUPERFAMILY SSF56112 24 270 5.25E-34 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS17390 62483a1a0f85976c39144192779cfd01 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 3.4E-95 T 29-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AL539_RS08430 787b05c80b7a2740ed27d5aabdc8a5e8 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 9.7E-25 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL539_RS08430 787b05c80b7a2740ed27d5aabdc8a5e8 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL539_RS08430 787b05c80b7a2740ed27d5aabdc8a5e8 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 5.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL539_RS08430 787b05c80b7a2740ed27d5aabdc8a5e8 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL539_RS08430 787b05c80b7a2740ed27d5aabdc8a5e8 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 5.8E-44 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL539_RS08430 787b05c80b7a2740ed27d5aabdc8a5e8 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.1E-21 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL539_RS01640 4a9181bf9244d735bb6584ffd7b6aed7 204 PIRSF PIRSF000495 4 204 1.0E-64 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL539_RS01640 4a9181bf9244d735bb6584ffd7b6aed7 204 SUPERFAMILY SSF52317 5 203 4.74E-53 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS01640 4a9181bf9244d735bb6584ffd7b6aed7 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.695 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL539_RS01640 4a9181bf9244d735bb6584ffd7b6aed7 204 Gene3D G3DSA:3.40.50.880 2 204 1.8E-43 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS01640 4a9181bf9244d735bb6584ffd7b6aed7 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 5.5E-18 T 29-03-2018 IPR017926 Glutamine amidotransferase AL539_RS01640 4a9181bf9244d735bb6584ffd7b6aed7 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 7.8E-69 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL539_RS03365 c34074195d5d07af68a489c3fa819b02 356 Gene3D G3DSA:3.40.50.2000 18 185 5.9E-7 T 29-03-2018 AL539_RS03365 c34074195d5d07af68a489c3fa819b02 356 Pfam PF13692 Glycosyl transferases group 1 190 311 2.8E-20 T 29-03-2018 AL539_RS03365 c34074195d5d07af68a489c3fa819b02 356 SUPERFAMILY SSF53756 23 351 5.76E-51 T 29-03-2018 AL539_RS03365 c34074195d5d07af68a489c3fa819b02 356 Gene3D G3DSA:3.40.50.2000 186 334 5.1E-29 T 29-03-2018 AL539_RS03365 c34074195d5d07af68a489c3fa819b02 356 Pfam PF13439 Glycosyltransferase Family 4 25 167 1.1E-14 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 Gene3D G3DSA:3.40.50.720 56 208 7.4E-49 T 29-03-2018 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 Gene3D G3DSA:3.40.50.720 1 42 0.0011 T 29-03-2018 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.956 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.6E-24 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 5.6E-17 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.1E-124 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 SUPERFAMILY SSF48179 348 487 1.34E-42 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 Gene3D G3DSA:1.10.1040.10 210 490 3.0E-81 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.2E-59 T 29-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 SUPERFAMILY SSF51735 28 209 1.34E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS12415 aaf1c132ba02969a42dce9d173bf948a 494 SUPERFAMILY SSF48179 210 341 1.7E-38 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS20460 74e4b023cdfb8d95c896404da63ddb33 220 SUPERFAMILY SSF141371 116 217 2.55E-16 T 29-03-2018 AL539_RS20460 74e4b023cdfb8d95c896404da63ddb33 220 SUPERFAMILY SSF141371 3 115 1.41E-29 T 29-03-2018 AL539_RS20460 74e4b023cdfb8d95c896404da63ddb33 220 Pfam PF07238 PilZ domain 113 205 3.3E-11 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AL539_RS20460 74e4b023cdfb8d95c896404da63ddb33 220 Pfam PF12945 Flagellar protein YcgR 15 105 7.4E-13 T 29-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL539_RS20460 74e4b023cdfb8d95c896404da63ddb33 220 Gene3D G3DSA:2.40.10.220 112 215 2.2E-11 T 29-03-2018 AL539_RS20460 74e4b023cdfb8d95c896404da63ddb33 220 Gene3D G3DSA:2.30.110.10 13 111 1.3E-17 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS22520 edd5c25e4fd5326bb32370b21c059dfa 288 Gene3D G3DSA:1.10.10.10 2 50 0.024 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22520 edd5c25e4fd5326bb32370b21c059dfa 288 Gene3D G3DSA:3.40.91.30 185 286 3.1E-9 T 29-03-2018 AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 PIRSF PIRSF002599 1 69 1.0E-21 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 5.0E-26 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 SUPERFAMILY SSF50249 4 68 1.54E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 29-03-2018 IPR019844 Cold-shock conserved site AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 Gene3D G3DSA:2.40.50.140 5 69 9.4E-26 T 29-03-2018 AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 PRINTS PR00050 Cold shock protein signature 7 22 7.8E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 PRINTS PR00050 Cold shock protein signature 27 36 7.8E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 PRINTS PR00050 Cold shock protein signature 42 60 7.8E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS14220 1dec6398a657ec2f86c6f279e64965d5 69 SMART SM00357 6 69 2.9E-25 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS07720 697633d53611d421ed1b83ccce705d27 166 SMART SM00935 12 166 9.3E-43 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL539_RS07720 697633d53611d421ed1b83ccce705d27 166 SUPERFAMILY SSF111384 23 166 1.57E-31 T 29-03-2018 IPR024930 Skp domain AL539_RS07720 697633d53611d421ed1b83ccce705d27 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 165 6.9E-27 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL539_RS07720 697633d53611d421ed1b83ccce705d27 166 Gene3D G3DSA:3.30.910.20 12 166 4.3E-22 T 29-03-2018 AL539_RS07720 697633d53611d421ed1b83ccce705d27 166 PIRSF PIRSF002094 1 166 6.5E-41 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01021 OMPA domain signature 256 272 2.5E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01021 OMPA domain signature 211 233 2.5E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01021 OMPA domain signature 241 256 2.5E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 Pfam PF00691 OmpA family 211 305 1.3E-24 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 SUPERFAMILY SSF56925 18 171 6.02E-29 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 Gene3D G3DSA:3.30.1330.60 187 320 1.9E-41 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 294 314 3.3E-5 T 29-03-2018 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 256 273 3.3E-5 T 29-03-2018 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 274 293 3.3E-5 T 29-03-2018 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 Pfam PF01389 OmpA-like transmembrane domain 18 170 2.3E-33 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 Gene3D G3DSA:2.40.160.20 4 186 1.5E-31 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS16400 33baf730575ae665bab519ceb018a99b 320 SUPERFAMILY SSF103088 183 311 4.05E-38 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 SUPERFAMILY SSF50993 20 386 1.67E-30 T 29-03-2018 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 SUPERFAMILY SSF53474 404 654 4.32E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 Pfam PF00326 Prolyl oligopeptidase family 446 659 2.5E-56 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 20 389 3.9E-22 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 Gene3D G3DSA:3.40.50.1820 16 660 9.5E-58 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 431 449 2.2E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 485 504 2.2E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 457 481 2.2E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 612 2.2E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 534 2.2E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24055 5977bee35ebdb35e8383e0634d46b85a 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 587 2.2E-35 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS23355 06a3eea84282dda21b44b492d2496fed 102 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 2.4E-41 T 29-03-2018 IPR014910 Putative monooxygenase YdhR AL539_RS23355 06a3eea84282dda21b44b492d2496fed 102 SUPERFAMILY SSF54909 3 96 9.12E-34 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS21930 c8561336bb699c2e7eafa8e868e95aab 253 Gene3D G3DSA:3.60.15.10 1 242 1.5E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS21930 c8561336bb699c2e7eafa8e868e95aab 253 Pfam PF00753 Metallo-beta-lactamase superfamily 10 209 1.5E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS21930 c8561336bb699c2e7eafa8e868e95aab 253 SUPERFAMILY SSF56281 8 244 5.11E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS21930 c8561336bb699c2e7eafa8e868e95aab 253 SMART SM00849 10 209 1.2E-17 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS19775 60db95b85584dbd4935aeb8d46ad5534 198 SUPERFAMILY SSF53335 5 197 6.39E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS19775 60db95b85584dbd4935aeb8d46ad5534 198 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 8 194 1.1E-29 T 29-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL539_RS19775 60db95b85584dbd4935aeb8d46ad5534 198 Gene3D G3DSA:3.40.50.150 3 198 5.4E-22 T 29-03-2018 AL539_RS25200 c39aaad55679ee6028d9ddeabc0a5e07 358 SUPERFAMILY SSF50952 17 350 1.57E-39 T 29-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AL539_RS25200 c39aaad55679ee6028d9ddeabc0a5e07 358 Gene3D G3DSA:2.120.10.30 14 259 9.1E-45 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL539_RS25200 c39aaad55679ee6028d9ddeabc0a5e07 358 Gene3D G3DSA:2.120.10.30 260 357 1.6E-11 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL539_RS25200 c39aaad55679ee6028d9ddeabc0a5e07 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 2.5E-111 T 29-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 PIRSF PIRSF015855 1 622 1.9E-168 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 411 425 1.3E-10 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 181 200 1.3E-10 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 117 129 1.3E-10 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 Pfam PF01555 DNA methylase 117 447 9.7E-45 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 Gene3D G3DSA:3.40.50.150 94 487 4.2E-54 T 29-03-2018 AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 SUPERFAMILY SSF53335 169 302 8.86E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 SUPERFAMILY SSF53335 91 138 8.86E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS01430 567ace08563259b15458b93d95b6eaf0 627 SUPERFAMILY SSF53335 360 467 8.86E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS17370 fa835d9367ae309cca93dfe9365d8486 116 Pfam PF01230 HIT domain 12 109 2.0E-29 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AL539_RS17370 fa835d9367ae309cca93dfe9365d8486 116 PRINTS PR00332 Histidine triad family signature 6 22 5.2E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AL539_RS17370 fa835d9367ae309cca93dfe9365d8486 116 PRINTS PR00332 Histidine triad family signature 95 105 5.2E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AL539_RS17370 fa835d9367ae309cca93dfe9365d8486 116 PRINTS PR00332 Histidine triad family signature 27 45 5.2E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AL539_RS17370 fa835d9367ae309cca93dfe9365d8486 116 Gene3D G3DSA:3.30.428.10 1 112 7.4E-28 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AL539_RS17370 fa835d9367ae309cca93dfe9365d8486 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 29-03-2018 IPR019808 Histidine triad, conserved site AL539_RS17370 fa835d9367ae309cca93dfe9365d8486 116 SUPERFAMILY SSF54197 2 112 5.26E-35 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AL539_RS16895 f97b5eb1c347d6a17addc43c09d152af 284 Pfam PF00561 alpha/beta hydrolase fold 27 263 6.4E-19 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS16895 f97b5eb1c347d6a17addc43c09d152af 284 Gene3D G3DSA:3.40.50.1820 1 280 1.9E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS16895 f97b5eb1c347d6a17addc43c09d152af 284 SUPERFAMILY SSF53474 2 282 1.08E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS20950 dd25323ecf12286de0bb4f040fcae83d 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 202 1.7E-20 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AL539_RS20950 dd25323ecf12286de0bb4f040fcae83d 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 1.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20950 dd25323ecf12286de0bb4f040fcae83d 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 1.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20950 dd25323ecf12286de0bb4f040fcae83d 340 Gene3D G3DSA:1.10.10.60 269 330 1.1E-13 T 29-03-2018 AL539_RS20950 dd25323ecf12286de0bb4f040fcae83d 340 SMART SM00342 245 327 4.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS20950 dd25323ecf12286de0bb4f040fcae83d 340 Pfam PF12833 Helix-turn-helix domain 251 328 4.1E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS20950 dd25323ecf12286de0bb4f040fcae83d 340 SUPERFAMILY SSF46689 280 331 1.25E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS19855 8f77d797b89b352ad9313e2ccfc354af 97 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 8 94 2.8E-26 T 29-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AL539_RS19855 8f77d797b89b352ad9313e2ccfc354af 97 Pfam PF03334 Na+/H+ antiporter subunit 8 86 1.5E-24 T 29-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AL539_RS09785 1f98a08e567dd59d0832709f0ea1d9ef 221 SUPERFAMILY SSF51735 2 207 3.64E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS09785 1f98a08e567dd59d0832709f0ea1d9ef 221 Pfam PF00106 short chain dehydrogenase 2 183 7.7E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS09785 1f98a08e567dd59d0832709f0ea1d9ef 221 Gene3D G3DSA:3.40.50.720 1 220 2.2E-42 T 29-03-2018 AL539_RS09785 1f98a08e567dd59d0832709f0ea1d9ef 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 18 2.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS09785 1f98a08e567dd59d0832709f0ea1d9ef 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS09785 1f98a08e567dd59d0832709f0ea1d9ef 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22365 8472a916f50ca9ced15a72e9bedd08e9 365 Gene3D G3DSA:3.30.70.270 213 365 1.4E-39 T 29-03-2018 AL539_RS22365 8472a916f50ca9ced15a72e9bedd08e9 365 SMART SM00267 205 365 1.6E-26 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22365 8472a916f50ca9ced15a72e9bedd08e9 365 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 362 3.9E-32 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22365 8472a916f50ca9ced15a72e9bedd08e9 365 SUPERFAMILY SSF55073 222 363 2.98E-35 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS22365 8472a916f50ca9ced15a72e9bedd08e9 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 363 5.9E-32 T 29-03-2018 IPR000160 GGDEF domain AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 Gene3D G3DSA:2.60.40.380 37 129 5.0E-7 T 29-03-2018 AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 Pfam PF09423 PhoD-like phosphatase 136 528 7.9E-117 T 29-03-2018 IPR018946 Alkaline phosphatase D-related AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 SUPERFAMILY SSF56300 136 308 9.49E-32 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 SUPERFAMILY SSF56300 340 368 9.49E-32 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 SUPERFAMILY SSF56300 416 532 9.49E-32 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 5.2E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 5.1E-29 T 29-03-2018 IPR032093 Phospholipase D, N-terminal AL539_RS02175 e39dce14934bcf24a1e68be206b918a2 557 Gene3D G3DSA:3.60.21.10 132 555 2.8E-51 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 Gene3D G3DSA:3.40.50.1360 73 238 1.8E-30 T 29-03-2018 AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 Pfam PF08220 DeoR-like helix-turn-helix domain 11 57 7.8E-11 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 SUPERFAMILY SSF100950 75 235 2.6E-21 T 29-03-2018 AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 SMART SM00420 6 58 1.7E-6 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 SMART SM01134 71 235 1.2E-47 T 29-03-2018 AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 SUPERFAMILY SSF46785 4 71 6.61E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 Pfam PF00455 DeoR C terminal sensor domain 75 234 1.8E-38 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AL539_RS03055 030c89ee0b4e2aacc51d9b31b3722d4d 257 Gene3D G3DSA:1.10.10.10 1 58 1.6E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.1E-28 T 29-03-2018 AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 SUPERFAMILY SSF52833 3 113 6.61E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 Gene3D G3DSA:1.25.40.10 125 196 6.8E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 Gene3D G3DSA:3.40.30.10 1 124 2.0E-23 T 29-03-2018 AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 Pfam PF14559 Tetratricopeptide repeat 124 190 4.7E-13 T 29-03-2018 AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 SUPERFAMILY SSF69103 112 192 5.75E-5 T 29-03-2018 IPR006789 Actin-related protein 2/3 complex subunit 5 GO:0005885|GO:0015629|GO:0030833|GO:0034314 AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 Gene3D G3DSA:1.25.40.10 197 284 3.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS16590 766ba4763afb594ddd40fdd839e8f14d 284 Pfam PF00085 Thioredoxin 6 109 1.3E-15 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL539_RS22730 5ae74216e4e4dcf6808cba62a0d1ae35 236 SUPERFAMILY SSF53187 13 106 1.06E-28 T 29-03-2018 AL539_RS22730 5ae74216e4e4dcf6808cba62a0d1ae35 236 SUPERFAMILY SSF53187 133 213 1.06E-28 T 29-03-2018 AL539_RS22730 5ae74216e4e4dcf6808cba62a0d1ae35 236 Gene3D G3DSA:3.40.630.10 38 234 3.9E-24 T 29-03-2018 AL539_RS22730 5ae74216e4e4dcf6808cba62a0d1ae35 236 Pfam PF00246 Zinc carboxypeptidase 18 156 5.7E-11 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL539_RS15555 dacce352a34b00e99e27b0d9980f8932 234 Gene3D G3DSA:3.50.40.10 56 202 1.8E-26 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL539_RS15555 dacce352a34b00e99e27b0d9980f8932 234 Pfam PF03483 B3/4 domain 63 192 6.9E-21 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL539_RS15555 dacce352a34b00e99e27b0d9980f8932 234 SUPERFAMILY SSF56037 52 209 1.91E-26 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL539_RS15555 dacce352a34b00e99e27b0d9980f8932 234 SMART SM00873 62 217 9.8E-15 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL539_RS09240 dc1b7598e9f023e48a8a3b9c31a6a0c1 187 SUPERFAMILY SSF143456 1 187 2.75E-67 T 29-03-2018 AL539_RS09240 dc1b7598e9f023e48a8a3b9c31a6a0c1 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.28 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 AL539_RS09240 dc1b7598e9f023e48a8a3b9c31a6a0c1 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 9.6E-51 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 AL539_RS09240 dc1b7598e9f023e48a8a3b9c31a6a0c1 187 Gene3D G3DSA:3.40.1740.10 112 179 6.3E-13 T 29-03-2018 AL539_RS09240 dc1b7598e9f023e48a8a3b9c31a6a0c1 187 Gene3D G3DSA:3.40.1740.10 1 95 2.3E-29 T 29-03-2018 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 2.1E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.1E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.1E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.1E-8 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 SUPERFAMILY SSF64518 539 645 4.05E-26 T 29-03-2018 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 SUPERFAMILY SSF64518 177 411 4.05E-26 T 29-03-2018 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 328 2.8E-60 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL539_RS16500 9e3f93b5e36c6decd83a42b53929574d 646 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 600 645 8.8E-10 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS04150 6aa2176078556c56875b870a3bb43733 349 Gene3D G3DSA:3.90.180.10 1 349 1.9E-65 T 29-03-2018 AL539_RS04150 6aa2176078556c56875b870a3bb43733 349 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 179 200 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AL539_RS04150 6aa2176078556c56875b870a3bb43733 349 Pfam PF00107 Zinc-binding dehydrogenase 190 310 1.1E-21 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL539_RS04150 6aa2176078556c56875b870a3bb43733 349 SMART SM00829 17 346 3.5E-14 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS04150 6aa2176078556c56875b870a3bb43733 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 147 2.5E-10 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL539_RS04150 6aa2176078556c56875b870a3bb43733 349 SUPERFAMILY SSF50129 4 186 3.14E-32 T 29-03-2018 IPR011032 GroES-like AL539_RS04150 6aa2176078556c56875b870a3bb43733 349 SUPERFAMILY SSF51735 152 320 6.09E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.0E-23 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 375 7.9E-60 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 Gene3D G3DSA:3.40.50.720 1 76 1.7E-6 T 29-03-2018 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 Gene3D G3DSA:3.40.50.720 77 201 1.9E-26 T 29-03-2018 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 SUPERFAMILY SSF48179 205 382 2.38E-46 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 SUPERFAMILY SSF51735 3 203 2.63E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.191 T 29-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL539_RS14160 59da832340a92e4240fc0649b62e9d34 382 Gene3D G3DSA:1.10.1040.10 208 382 5.8E-47 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS23670 fbb68e38db463ac4e387027633e48ca2 265 Gene3D G3DSA:3.20.20.450 27 258 4.2E-11 T 29-03-2018 IPR001633 EAL domain AL539_RS23670 fbb68e38db463ac4e387027633e48ca2 265 SUPERFAMILY SSF141868 30 257 8.63E-10 T 29-03-2018 IPR001633 EAL domain AL539_RS23670 fbb68e38db463ac4e387027633e48ca2 265 Pfam PF00563 EAL domain 31 250 2.1E-9 T 29-03-2018 IPR001633 EAL domain AL539_RS05720 4383273c6eec6b5f3a13c90f04d8c872 363 PIRSF PIRSF039026 3 362 2.7E-144 T 29-03-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL539_RS05720 4383273c6eec6b5f3a13c90f04d8c872 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 1.3E-70 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL539_RS05720 4383273c6eec6b5f3a13c90f04d8c872 363 Gene3D G3DSA:3.40.190.10 165 342 2.5E-4 T 29-03-2018 AL539_RS05905 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL539_RS05905 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 PIRSF PIRSF000847 1 184 3.6E-46 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL539_RS05905 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL539_RS05905 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 4.3E-55 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL539_RS10815 1e2b367142adf691ae4db2083cce50c7 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 4.9E-127 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL539_RS10815 1e2b367142adf691ae4db2083cce50c7 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 319 7.8E-44 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL539_RS10815 1e2b367142adf691ae4db2083cce50c7 323 Gene3D G3DSA:3.30.930.10 5 321 1.7E-64 T 29-03-2018 AL539_RS10815 1e2b367142adf691ae4db2083cce50c7 323 SUPERFAMILY SSF55681 10 320 8.81E-80 T 29-03-2018 AL539_RS10815 1e2b367142adf691ae4db2083cce50c7 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.007 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL539_RS13250 00d5179c1f1efb3d03573c471d22df1b 193 Gene3D G3DSA:2.160.10.10 6 189 1.7E-26 T 29-03-2018 AL539_RS13250 00d5179c1f1efb3d03573c471d22df1b 193 SUPERFAMILY SSF51161 12 73 1.44E-24 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS13250 00d5179c1f1efb3d03573c471d22df1b 193 SUPERFAMILY SSF51161 101 173 1.44E-24 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS17800 85a97c2256da88d56b0f3fb0097cc04d 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 2.4E-30 T 29-03-2018 IPR011846 Cyd operon protein YbgE AL539_RS17800 85a97c2256da88d56b0f3fb0097cc04d 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 100 1.1E-39 T 29-03-2018 IPR011846 Cyd operon protein YbgE AL539_RS14415 c8ef69df48ed101609b1847ce736ac06 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.4E-38 T 29-03-2018 IPR009659 Protein of unknown function DUF1249 AL539_RS22220 f1fdfa967ef2606816f5cc2d7cbac1a0 299 SUPERFAMILY SSF103481 188 285 1.83E-12 T 29-03-2018 AL539_RS22220 f1fdfa967ef2606816f5cc2d7cbac1a0 299 Pfam PF00892 EamA-like transporter family 151 283 1.0E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS22220 f1fdfa967ef2606816f5cc2d7cbac1a0 299 Pfam PF00892 EamA-like transporter family 9 135 1.1E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS22220 f1fdfa967ef2606816f5cc2d7cbac1a0 299 SUPERFAMILY SSF103481 42 138 1.31E-12 T 29-03-2018 AL539_RS18640 d4179d143047418f71059ffa7059c048 802 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 789 1.6E-257 T 29-03-2018 IPR020009 Extracellular lipase, Pla-1/cef family AL539_RS18640 d4179d143047418f71059ffa7059c048 802 SUPERFAMILY SSF53474 441 499 7.25E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS18640 d4179d143047418f71059ffa7059c048 802 SUPERFAMILY SSF53474 557 602 7.25E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS18640 d4179d143047418f71059ffa7059c048 802 Gene3D G3DSA:3.40.50.1820 422 760 1.0E-13 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS18640 d4179d143047418f71059ffa7059c048 802 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 271 6.4E-129 T 29-03-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain AL539_RS15995 7509daa4b87b32badac1c0c6bd8cbe92 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 1.0E-69 T 29-03-2018 IPR009948 Syd GO:0009898 AL539_RS15995 7509daa4b87b32badac1c0c6bd8cbe92 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.885 T 29-03-2018 IPR009948 Syd GO:0009898 AL539_RS03435 662f8dc7b3499f9292416b94fc207322 320 SUPERFAMILY SSF55073 161 318 3.06E-50 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS03435 662f8dc7b3499f9292416b94fc207322 320 Gene3D G3DSA:3.30.70.270 151 318 8.1E-55 T 29-03-2018 AL539_RS03435 662f8dc7b3499f9292416b94fc207322 320 SUPERFAMILY SSF55785 13 94 1.08E-7 T 29-03-2018 IPR000014 PAS domain AL539_RS03435 662f8dc7b3499f9292416b94fc207322 320 SMART SM00267 145 317 9.7E-58 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03435 662f8dc7b3499f9292416b94fc207322 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 316 1.1E-53 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03435 662f8dc7b3499f9292416b94fc207322 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 2.2E-43 T 29-03-2018 IPR000160 GGDEF domain AL539_RS03435 662f8dc7b3499f9292416b94fc207322 320 Gene3D G3DSA:3.30.450.20 10 150 3.3E-11 T 29-03-2018 AL539_RS24910 db30b6546fe65f5a8b3ba1a4a3d86f54 110 SMART SM00530 9 64 1.5E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS24910 db30b6546fe65f5a8b3ba1a4a3d86f54 110 Pfam PF13560 Helix-turn-helix domain 10 61 1.6E-9 T 29-03-2018 AL539_RS24910 db30b6546fe65f5a8b3ba1a4a3d86f54 110 SUPERFAMILY SSF47413 6 61 3.94E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS24910 db30b6546fe65f5a8b3ba1a4a3d86f54 110 Gene3D G3DSA:1.10.260.40 2 76 1.5E-12 T 29-03-2018 AL539_RS25785 e83400c84a46449c1aef1a850a07835e 296 SUPERFAMILY SSF53850 89 290 3.96E-34 T 29-03-2018 AL539_RS25785 e83400c84a46449c1aef1a850a07835e 296 SUPERFAMILY SSF46785 2 111 1.22E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25785 e83400c84a46449c1aef1a850a07835e 296 Gene3D G3DSA:3.40.190.10 93 177 2.1E-21 T 29-03-2018 AL539_RS25785 e83400c84a46449c1aef1a850a07835e 296 Gene3D G3DSA:1.10.10.10 3 92 2.6E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25785 e83400c84a46449c1aef1a850a07835e 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS25785 e83400c84a46449c1aef1a850a07835e 296 Gene3D G3DSA:3.40.190.10 178 263 1.7E-8 T 29-03-2018 AL539_RS25785 e83400c84a46449c1aef1a850a07835e 296 Pfam PF03466 LysR substrate binding domain 88 286 3.5E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS06230 8f63337d7302b3579d1b196e6c915c0a 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS06230 8f63337d7302b3579d1b196e6c915c0a 255 Gene3D G3DSA:3.30.70.20 26 59 0.0083 T 29-03-2018 AL539_RS06230 8f63337d7302b3579d1b196e6c915c0a 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 1.0E-29 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS06230 8f63337d7302b3579d1b196e6c915c0a 255 Gene3D G3DSA:3.30.70.20 162 242 1.6E-24 T 29-03-2018 AL539_RS06230 8f63337d7302b3579d1b196e6c915c0a 255 Gene3D G3DSA:3.30.70.20 60 123 5.4E-18 T 29-03-2018 AL539_RS06230 8f63337d7302b3579d1b196e6c915c0a 255 SUPERFAMILY SSF54862 47 231 1.99E-66 T 29-03-2018 AL539_RS06230 8f63337d7302b3579d1b196e6c915c0a 255 Gene3D G3DSA:3.30.70.20 124 161 6.1E-19 T 29-03-2018 AL539_RS19150 9cd16fcebdb4af352b56b942d95046e0 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 230 1.7E-25 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL539_RS07770 d512043e44414d58d3397eff8ee08926 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.558 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL539_RS07770 d512043e44414d58d3397eff8ee08926 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL539_RS07770 d512043e44414d58d3397eff8ee08926 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 5.1E-83 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL539_RS07770 d512043e44414d58d3397eff8ee08926 292 Pfam PF00557 Metallopeptidase family M24 12 271 6.2E-46 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS07770 d512043e44414d58d3397eff8ee08926 292 SUPERFAMILY SSF55920 3 282 1.83E-81 T 29-03-2018 IPR000994 Peptidase M24 AL539_RS07770 d512043e44414d58d3397eff8ee08926 292 Gene3D G3DSA:3.90.230.10 2 292 3.9E-84 T 29-03-2018 AL539_RS13045 fd98438c392222dafc366bc0ca917d0e 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 1.2E-12 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL539_RS13045 fd98438c392222dafc366bc0ca917d0e 210 Gene3D G3DSA:3.30.1150.10 45 210 1.2E-15 T 29-03-2018 AL539_RS13045 fd98438c392222dafc366bc0ca917d0e 210 SUPERFAMILY SSF74653 122 207 7.72E-18 T 29-03-2018 AL539_RS13045 fd98438c392222dafc366bc0ca917d0e 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 3.0E-15 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 SMART SM00487 150 342 3.9E-15 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.111 T 29-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 Pfam PF00176 SNF2 family N-terminal domain 174 343 1.7E-14 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.2E-147 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 SUPERFAMILY SSF52540 273 337 6.99E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 SUPERFAMILY SSF52540 482 653 6.99E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 9.5E-16 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 SMART SM00490 519 603 2.7E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 Gene3D G3DSA:3.40.50.10810 155 410 4.8E-25 T 29-03-2018 AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 SUPERFAMILY SSF52540 127 377 2.38E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09995 fdba060317fa9f70b01649840b3d6c17 969 Gene3D G3DSA:3.40.50.300 485 936 7.7E-23 T 29-03-2018 AL539_RS24405 1cb95f0e3c16d6e33f1f8ddfa00e67c0 161 Gene3D G3DSA:3.10.129.10 4 150 2.3E-39 T 29-03-2018 AL539_RS24405 1cb95f0e3c16d6e33f1f8ddfa00e67c0 161 Pfam PF03061 Thioesterase superfamily 22 97 8.7E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL539_RS24405 1cb95f0e3c16d6e33f1f8ddfa00e67c0 161 SUPERFAMILY SSF54637 6 150 3.44E-41 T 29-03-2018 IPR029069 HotDog domain AL539_RS13265 ab1145eec3f02dda557945a27b3e31b2 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 7.4E-70 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL539_RS13265 ab1145eec3f02dda557945a27b3e31b2 352 Gene3D G3DSA:3.40.50.2000 1 145 3.6E-35 T 29-03-2018 AL539_RS13265 ab1145eec3f02dda557945a27b3e31b2 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 345 9.2E-151 T 29-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AL539_RS13265 ab1145eec3f02dda557945a27b3e31b2 352 SUPERFAMILY SSF53756 2 344 4.39E-97 T 29-03-2018 AL539_RS13265 ab1145eec3f02dda557945a27b3e31b2 352 Gene3D G3DSA:3.40.50.2000 165 346 5.3E-47 T 29-03-2018 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 Gene3D G3DSA:3.30.540.10 4 163 5.4E-44 T 29-03-2018 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 4.9E-5 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 4.9E-5 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 4.9E-5 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 SUPERFAMILY SSF56655 6 272 3.4E-78 T 29-03-2018 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 Pfam PF00459 Inositol monophosphatase family 7 253 7.9E-51 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 Gene3D G3DSA:3.40.190.80 164 273 8.7E-30 T 29-03-2018 AL539_RS12945 ec5763a04614d9961e5c571ce4cd0d0d 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.1E-106 T 29-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AL539_RS15830 b92f8fa4a47ade8dce8748662689359d 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 142 4.8E-13 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS15830 b92f8fa4a47ade8dce8748662689359d 728 Pfam PF00593 TonB dependent receptor 246 727 4.1E-29 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS15830 b92f8fa4a47ade8dce8748662689359d 728 Gene3D G3DSA:2.170.130.10 24 157 5.7E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS15830 b92f8fa4a47ade8dce8748662689359d 728 SUPERFAMILY SSF56935 32 728 4.88E-82 T 29-03-2018 AL539_RS15830 b92f8fa4a47ade8dce8748662689359d 728 Gene3D G3DSA:2.40.170.20 158 728 5.5E-60 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS10025 140d04ab1701591227d47b1487a0221c 189 PIRSF PIRSF006305 2 189 5.5E-58 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS10025 140d04ab1701591227d47b1487a0221c 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.74 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS10025 140d04ab1701591227d47b1487a0221c 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 2.8E-55 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS10025 140d04ab1701591227d47b1487a0221c 189 Gene3D G3DSA:3.90.950.10 3 189 2.2E-69 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS10025 140d04ab1701591227d47b1487a0221c 189 SUPERFAMILY SSF52972 5 187 2.62E-63 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS10025 140d04ab1701591227d47b1487a0221c 189 Pfam PF02545 Maf-like protein 7 187 1.4E-60 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 PIRSF PIRSF001369 38 429 1.4E-174 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.1E-238 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 SUPERFAMILY SSF48256 4 428 1.03E-170 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 5.5E-135 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:1.10.580.10 30 281 4.6E-90 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AL539_RS16765 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:1.10.230.10 282 379 5.7E-38 T 29-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 SUPERFAMILY SSF51735 5 159 1.85E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 2.3E-61 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 Gene3D G3DSA:3.30.360.10 144 315 3.5E-73 T 29-03-2018 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 9.2E-32 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.6E-129 T 29-03-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 PIRSF PIRSF000148 4 337 1.7E-133 T 29-03-2018 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 SUPERFAMILY SSF55347 131 320 4.76E-78 T 29-03-2018 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 SMART SM00859 6 121 7.3E-41 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.305 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AL539_RS07070 3bb57d19418bdac6c5adb05dcca2d44a 337 Gene3D G3DSA:3.40.50.720 1 143 1.3E-32 T 29-03-2018 AL539_RS07330 64cbe185c56139c48006ebca6de3c243 505 SMART SM00382 291 444 7.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS07330 64cbe185c56139c48006ebca6de3c243 505 Gene3D G3DSA:3.40.50.300 289 486 9.8E-23 T 29-03-2018 AL539_RS07330 64cbe185c56139c48006ebca6de3c243 505 Pfam PF00448 SRP54-type protein, GTPase domain 294 481 5.2E-38 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS07330 64cbe185c56139c48006ebca6de3c243 505 SMART SM00962 292 485 2.9E-63 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL539_RS07330 64cbe185c56139c48006ebca6de3c243 505 SUPERFAMILY SSF52540 288 479 2.17E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07330 64cbe185c56139c48006ebca6de3c243 505 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 148 380 8.0E-70 T 29-03-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 2.2E-64 T 29-03-2018 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10420 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 Pfam PF00871 Acetokinase family 5 390 2.8E-167 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 172 185 7.4E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 377 389 7.4E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 298 311 7.4E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 321 337 7.4E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 5 16 7.4E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 202 223 7.4E-45 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 PIRSF PIRSF000722 1 397 1.3E-147 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 SUPERFAMILY SSF53067 3 195 1.68E-64 T 29-03-2018 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 Gene3D G3DSA:3.30.420.40 4 194 7.9E-70 T 29-03-2018 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 SUPERFAMILY SSF53067 156 395 7.66E-85 T 29-03-2018 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 188.284 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 7.5E-174 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL539_RS06590 410543532bab2fbb256b7b44604f956d 398 Gene3D G3DSA:3.30.420.40 195 397 2.4E-80 T 29-03-2018 AL539_RS06630 97779c9bb2c5566f1d04083c3ed9159a 558 Gene3D G3DSA:3.10.105.10 323 528 2.8E-57 T 29-03-2018 AL539_RS06630 97779c9bb2c5566f1d04083c3ed9159a 558 PIRSF PIRSF002741 3 558 3.6E-117 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS06630 97779c9bb2c5566f1d04083c3ed9159a 558 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 104 125 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL539_RS06630 97779c9bb2c5566f1d04083c3ed9159a 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 478 4.8E-95 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS06630 97779c9bb2c5566f1d04083c3ed9159a 558 Gene3D G3DSA:3.40.190.10 226 322 7.9E-27 T 29-03-2018 AL539_RS06630 97779c9bb2c5566f1d04083c3ed9159a 558 SUPERFAMILY SSF53850 56 546 4.16E-150 T 29-03-2018 AL539_RS06630 97779c9bb2c5566f1d04083c3ed9159a 558 Gene3D G3DSA:3.90.76.10 66 225 6.8E-42 T 29-03-2018 AL539_RS06245 211a7dd5d51459624a5e532edf0300b0 203 SUPERFAMILY SSF46626 29 98 2.93E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06245 211a7dd5d51459624a5e532edf0300b0 203 Pfam PF00034 Cytochrome c 133 201 1.2E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06245 211a7dd5d51459624a5e532edf0300b0 203 Gene3D G3DSA:1.10.760.10 14 97 1.4E-13 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06245 211a7dd5d51459624a5e532edf0300b0 203 Gene3D G3DSA:1.10.760.10 100 201 2.6E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06245 211a7dd5d51459624a5e532edf0300b0 203 SUPERFAMILY SSF46626 120 201 1.75E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS06245 211a7dd5d51459624a5e532edf0300b0 203 PIRSF PIRSF000005 1 203 5.9E-62 T 29-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL539_RS16335 d837f7933407b723473e8c73a42f2df2 193 SMART SM00463 92 175 2.5E-14 T 29-03-2018 IPR002625 Smr domain AL539_RS16335 d837f7933407b723473e8c73a42f2df2 193 Pfam PF01713 Smr domain 95 175 1.3E-21 T 29-03-2018 IPR002625 Smr domain AL539_RS16335 d837f7933407b723473e8c73a42f2df2 193 SUPERFAMILY SSF160443 93 175 4.32E-14 T 29-03-2018 IPR002625 Smr domain AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.3E-19 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 PIRSF PIRSF001435 1 211 1.0E-49 T 29-03-2018 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 Gene3D G3DSA:1.10.340.30 12 117 3.2E-22 T 29-03-2018 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 Gene3D G3DSA:1.10.1670.10 118 213 1.4E-29 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.986 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.5E-88 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 SMART SM00525 186 206 5.9E-6 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 SUPERFAMILY SSF48150 5 207 8.32E-71 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 SMART SM00478 38 185 8.1E-56 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL539_RS06725 2963d9daf921c116074a2a4bbfecf247 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL539_RS18955 cf775585ff1a5e45b300db9bc204b710 214 Pfam PF00929 Exonuclease 18 173 2.5E-31 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS18955 cf775585ff1a5e45b300db9bc204b710 214 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 17 196 6.6E-30 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS18955 cf775585ff1a5e45b300db9bc204b710 214 SUPERFAMILY SSF53098 11 185 1.07E-52 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS18955 cf775585ff1a5e45b300db9bc204b710 214 Gene3D G3DSA:1.20.5.140 168 186 5.4E-7 T 29-03-2018 AL539_RS18955 cf775585ff1a5e45b300db9bc204b710 214 Gene3D G3DSA:3.30.420.10 2 167 3.0E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS18955 cf775585ff1a5e45b300db9bc204b710 214 SMART SM00479 16 183 1.3E-41 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS08330 9b763ad20578f940beeeeadc718e1cf5 133 PIRSF PIRSF029225 2 133 2.1E-43 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS08330 9b763ad20578f940beeeeadc718e1cf5 133 Gene3D G3DSA:3.40.50.10220 37 132 5.4E-31 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS08330 9b763ad20578f940beeeeadc718e1cf5 133 Pfam PF03603 DNA polymerase III psi subunit 4 130 6.2E-38 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS08330 9b763ad20578f940beeeeadc718e1cf5 133 SUPERFAMILY SSF102220 33 132 4.05E-28 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS08330 9b763ad20578f940beeeeadc718e1cf5 133 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 56 128 7.0E-6 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS15480 cdfa795df14a0ac7784fc8cae2bb562a 154 Gene3D G3DSA:2.60.40.10 4 88 2.6E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS12645 855a04d7dcf7e930843921df4d388b68 143 Pfam PF01814 Hemerythrin HHE cation binding domain 4 121 4.2E-12 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL539_RS12645 855a04d7dcf7e930843921df4d388b68 143 Gene3D G3DSA:1.20.120.520 1 140 3.5E-14 T 29-03-2018 AL539_RS17055 81c929ec9587a34a13034b3d272e019f 246 Gene3D G3DSA:1.10.530.10 47 194 3.4E-10 T 29-03-2018 AL539_RS17055 81c929ec9587a34a13034b3d272e019f 246 SUPERFAMILY SSF53955 72 193 2.81E-12 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS17055 81c929ec9587a34a13034b3d272e019f 246 Pfam PF01464 Transglycosylase SLT domain 99 152 1.4E-4 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 Gene3D G3DSA:3.40.50.720 203 383 2.1E-58 T 29-03-2018 AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 2.7E-46 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 7.9E-75 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 6.6E-271 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 PIRSF PIRSF000203 1 516 9.8E-270 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 2.1E-36 T 29-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 Gene3D G3DSA:3.40.50.720 1 199 3.7E-48 T 29-03-2018 AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 SMART SM01003 4 143 7.8E-67 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 29-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 SUPERFAMILY SSF51735 143 319 2.34E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 SMART SM01002 152 317 3.5E-83 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL539_RS18420 f4e5a8cf639dcda5e93e77019e818ab1 518 SUPERFAMILY SSF52283 2 174 6.55E-51 T 29-03-2018 AL539_RS19490 5589932367210f59b15591289f5835f1 213 Gene3D G3DSA:2.40.440.10 66 211 6.1E-4 T 29-03-2018 AL539_RS19490 5589932367210f59b15591289f5835f1 213 Pfam PF13645 L,D-transpeptidase catalytic domain 50 211 9.8E-66 T 29-03-2018 IPR032676 Putative L,D-transpeptidase catalytic domain AL539_RS10510 b5816944a32e84f21e2739970c1aa8d6 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL539_RS10510 b5816944a32e84f21e2739970c1aa8d6 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL539_RS10510 b5816944a32e84f21e2739970c1aa8d6 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL539_RS10510 b5816944a32e84f21e2739970c1aa8d6 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 29-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL539_RS10510 b5816944a32e84f21e2739970c1aa8d6 289 SUPERFAMILY SSF52540 4 286 3.58E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10510 b5816944a32e84f21e2739970c1aa8d6 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 5.1E-70 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AL539_RS10510 b5816944a32e84f21e2739970c1aa8d6 289 Gene3D G3DSA:3.40.50.300 1 289 2.1E-42 T 29-03-2018 AL539_RS15035 29155af1e947ffb4323182ee1b416d97 648 Gene3D G3DSA:1.25.20.10 32 394 8.5E-37 T 29-03-2018 AL539_RS15035 29155af1e947ffb4323182ee1b416d97 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 6.0E-23 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL539_RS15035 29155af1e947ffb4323182ee1b416d97 648 SUPERFAMILY SSF53955 484 643 4.93E-48 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS15035 29155af1e947ffb4323182ee1b416d97 648 Gene3D G3DSA:1.10.1240.20 412 476 8.9E-15 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL539_RS15035 29155af1e947ffb4323182ee1b416d97 648 Pfam PF01464 Transglycosylase SLT domain 489 600 2.9E-29 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS15035 29155af1e947ffb4323182ee1b416d97 648 SUPERFAMILY SSF48435 33 481 1.15E-128 T 29-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AL539_RS15035 29155af1e947ffb4323182ee1b416d97 648 Gene3D G3DSA:1.10.530.10 477 648 2.9E-37 T 29-03-2018 AL539_RS06930 923c80a0bcf53334a787e4ac502adca8 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 56 255 1.4E-60 T 29-03-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AL539_RS06930 923c80a0bcf53334a787e4ac502adca8 315 PIRSF PIRSF020419 1 299 2.2E-80 T 29-03-2018 IPR016773 Ferric uptake regulator, CjrA, predicted AL539_RS06930 923c80a0bcf53334a787e4ac502adca8 315 SUPERFAMILY SSF159501 33 282 8.37E-75 T 29-03-2018 AL539_RS23655 90a1fb32acff77b3af14170e1204b032 448 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 7.1E-49 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AL539_RS23655 90a1fb32acff77b3af14170e1204b032 448 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 8.1E-14 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AL539_RS23655 90a1fb32acff77b3af14170e1204b032 448 Gene3D G3DSA:1.10.1330.10 45 148 0.33 T 29-03-2018 AL539_RS23655 90a1fb32acff77b3af14170e1204b032 448 Gene3D G3DSA:1.10.1330.10 149 368 0.019 T 29-03-2018 AL539_RS23655 90a1fb32acff77b3af14170e1204b032 448 Pfam PF07196 Flagellin hook IN motif 124 181 1.3E-6 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 SUPERFAMILY SSF111369 50 265 6.93E-27 T 29-03-2018 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 Pfam PF13533 Biotin-lipoyl like 62 103 2.2E-11 T 29-03-2018 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 346 361 2.4E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 2.4E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 354 7.6E-65 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:3.90.1170.30 74 101 3.2E-4 T 29-03-2018 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 Pfam PF13437 HlyD family secretion protein 155 253 6.0E-8 T 29-03-2018 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:2.40.50.100 20 73 5.1E-4 T 29-03-2018 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:1.10.287.470 102 145 1.6E-9 T 29-03-2018 AL539_RS01815 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:2.40.50.100 146 359 3.9E-5 T 29-03-2018 AL539_RS07975 aaea61eafaa95fe71ff02819926f7267 102 Pfam PF01722 BolA-like protein 10 83 6.8E-30 T 29-03-2018 IPR002634 BolA protein AL539_RS07975 aaea61eafaa95fe71ff02819926f7267 102 PIRSF PIRSF003113 1 99 5.5E-37 T 29-03-2018 IPR002634 BolA protein AL539_RS07975 aaea61eafaa95fe71ff02819926f7267 102 SUPERFAMILY SSF82657 1 88 1.44E-31 T 29-03-2018 IPR002634 BolA protein AL539_RS07975 aaea61eafaa95fe71ff02819926f7267 102 Gene3D G3DSA:3.30.300.90 1 90 3.2E-28 T 29-03-2018 AL539_RS03300 57c59c516b14c3ea7957cf0bb218061e 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 2.1E-17 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS03300 57c59c516b14c3ea7957cf0bb218061e 159 SUPERFAMILY SSF56925 17 158 2.04E-20 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS03300 57c59c516b14c3ea7957cf0bb218061e 159 Gene3D G3DSA:2.40.160.20 5 159 3.7E-14 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS19840 31a6b3a74b8f699252830315049d3df7 522 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 459 476 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS19840 31a6b3a74b8f699252830315049d3df7 522 Gene3D G3DSA:3.30.1360.60 445 520 1.6E-22 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS19840 31a6b3a74b8f699252830315049d3df7 522 SUPERFAMILY SSF55604 446 520 4.05E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS19840 31a6b3a74b8f699252830315049d3df7 522 Pfam PF02378 Phosphotransferase system, EIIC 16 347 3.3E-63 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS19840 31a6b3a74b8f699252830315049d3df7 522 Pfam PF00367 phosphotransferase system, EIIB 450 480 2.2E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL539_RS19840 31a6b3a74b8f699252830315049d3df7 522 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 410 506 6.3E-14 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL539_RS19840 31a6b3a74b8f699252830315049d3df7 522 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 10 520 5.0E-209 T 29-03-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 AL539_RS05715 b7f0bdece06c131a4ad3e0c54c559a7d 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.9E-27 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL539_RS22735 50491d11e98d7b42094e45f8e2250d65 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 2.0E-85 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS22735 50491d11e98d7b42094e45f8e2250d65 541 Gene3D G3DSA:3.40.190.10 176 310 2.0E-36 T 29-03-2018 AL539_RS22735 50491d11e98d7b42094e45f8e2250d65 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AL539_RS22735 50491d11e98d7b42094e45f8e2250d65 541 SUPERFAMILY SSF53850 36 533 1.86E-140 T 29-03-2018 AL539_RS22735 50491d11e98d7b42094e45f8e2250d65 541 Gene3D G3DSA:3.90.76.10 63 175 7.2E-35 T 29-03-2018 AL539_RS22735 50491d11e98d7b42094e45f8e2250d65 541 Gene3D G3DSA:3.10.105.10 311 511 3.7E-56 T 29-03-2018 AL539_RS22735 50491d11e98d7b42094e45f8e2250d65 541 PIRSF PIRSF002741 1 541 2.8E-114 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 72 4.5E-9 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 Gene3D G3DSA:1.10.10.10 72 157 1.2E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 1.2E-38 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 1.9E-33 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 SUPERFAMILY SSF53155 4 80 5.89E-19 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.617 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 SUPERFAMILY SSF46767 75 156 1.96E-33 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL539_RS22475 16bf66a89d3c1cb8f92b44013f2c9edc 160 Gene3D G3DSA:3.30.160.70 1 71 1.5E-19 T 29-03-2018 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 Pfam PF07690 Major Facilitator Superfamily 34 401 3.6E-50 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 1.7E-151 T 29-03-2018 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 4.6E-235 T 29-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 Gene3D G3DSA:1.20.1250.20 18 224 5.6E-33 T 29-03-2018 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 PIRSF PIRSF002808 5 452 4.1E-170 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 Gene3D G3DSA:1.20.1250.20 241 454 1.4E-35 T 29-03-2018 AL539_RS08150 118c80e56aecdb2663de5bac45fc724c 454 SUPERFAMILY SSF103473 16 450 1.1E-86 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS04320 34789b498eb6e6b352879ac657e678d0 166 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 22 157 1.6E-16 T 29-03-2018 IPR009936 Protein of unknown function DUF1468 AL539_RS13255 5120461518c07f054e7468d649a78ae0 279 Gene3D G3DSA:3.90.550.10 6 210 3.0E-9 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS13255 5120461518c07f054e7468d649a78ae0 279 Pfam PF00535 Glycosyl transferase family 2 9 105 3.0E-5 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL539_RS13255 5120461518c07f054e7468d649a78ae0 279 SUPERFAMILY SSF53448 8 251 2.63E-12 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS15930 404066f0bb7e974bf8325b596a26efac 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS15930 404066f0bb7e974bf8325b596a26efac 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS15930 404066f0bb7e974bf8325b596a26efac 80 SUPERFAMILY SSF116842 2 72 9.29E-21 T 29-03-2018 AL539_RS15930 404066f0bb7e974bf8325b596a26efac 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS15930 404066f0bb7e974bf8325b596a26efac 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS15930 404066f0bb7e974bf8325b596a26efac 80 PIRSF PIRSF006488 1 80 9.0E-21 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS15930 404066f0bb7e974bf8325b596a26efac 80 Gene3D G3DSA:1.10.287.1040 8 72 4.3E-22 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL539_RS21790 d5ace7c96345b6f6c7b95bae8e231504 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 4.3E-141 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL539_RS21790 d5ace7c96345b6f6c7b95bae8e231504 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.0E-23 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL539_RS21790 d5ace7c96345b6f6c7b95bae8e231504 402 Pfam PF07670 Nucleoside recognition 90 185 2.9E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS21790 d5ace7c96345b6f6c7b95bae8e231504 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 2.9E-73 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL539_RS13710 6cc612c1cee2d683028c75c97cc5b381 574 Gene3D G3DSA:3.30.70.1450 205 286 6.1E-15 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS13710 6cc612c1cee2d683028c75c97cc5b381 574 Gene3D G3DSA:3.30.70.1450 289 363 1.0E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS13710 6cc612c1cee2d683028c75c97cc5b381 574 SUPERFAMILY SSF116726 206 283 3.4E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS13710 6cc612c1cee2d683028c75c97cc5b381 574 SUPERFAMILY SSF116726 290 349 1.44E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS13710 6cc612c1cee2d683028c75c97cc5b381 574 Pfam PF03600 Citrate transporter 28 518 7.0E-26 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL539_RS13710 6cc612c1cee2d683028c75c97cc5b381 574 Pfam PF02080 TrkA-C domain 293 349 1.0E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS13710 6cc612c1cee2d683028c75c97cc5b381 574 Pfam PF02080 TrkA-C domain 209 276 7.3E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS17385 5f380bd40f07046908e3b60c4951e66a 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 3.1E-55 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB AL539_RS17385 5f380bd40f07046908e3b60c4951e66a 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 7.5E-75 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB AL539_RS17385 5f380bd40f07046908e3b60c4951e66a 196 Gene3D G3DSA:3.40.50.10070 58 194 7.9E-18 T 29-03-2018 AL539_RS14355 1df4187e10dc356d4d2547dfaa553bc8 228 Pfam PF16537 Type II secretion system protein B 163 222 5.3E-25 T 29-03-2018 IPR032389 Type II secretion system protein B AL539_RS25070 019a4a89aa315f84069385dcd1a0d3f5 236 Pfam PF02104 SURF1 family 2 209 3.0E-20 T 29-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.7E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.7E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.7E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.7E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 Gene3D G3DSA:1.10.10.10 7 115 3.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 Pfam PF01047 MarR family 37 95 3.3E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 SUPERFAMILY SSF46785 10 146 1.29E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 SMART SM00347 30 131 2.2E-21 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_RS20475 0c282b55fde39911004486016ad9fd85 151 Gene3D G3DSA:1.10.287.100 116 146 2.8E-4 T 29-03-2018 AL539_RS02390 302e177108b14ec1805efbd343bda20c 268 Pfam PF02654 Cobalamin-5-phosphate synthase 25 259 1.0E-52 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02390 302e177108b14ec1805efbd343bda20c 268 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 268 46.739 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02390 302e177108b14ec1805efbd343bda20c 268 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 25 260 4.8E-36 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS07205 2d81f26e86d22ec632adea932cb06730 152 Gene3D G3DSA:1.10.287.540 7 144 3.0E-4 T 29-03-2018 AL539_RS00710 2d81f26e86d22ec632adea932cb06730 152 Gene3D G3DSA:1.10.287.540 7 144 3.0E-4 T 29-03-2018 AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 SUPERFAMILY SSF51735 9 242 2.68E-65 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0058 T 29-03-2018 AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 Pfam PF00106 short chain dehydrogenase 13 208 1.7E-54 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 Gene3D G3DSA:3.40.50.720 192 248 5.8E-6 T 29-03-2018 AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.4E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.4E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.4E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.4E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.4E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.1E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.1E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.1E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL539_RS06320 8c923ae584f7c396a7df4f233b0beb91 248 Gene3D G3DSA:3.40.50.720 2 191 4.3E-56 T 29-03-2018 AL539_RS19030 5a66976f8e0cb5f5981df990493538f6 180 SUPERFAMILY SSF52540 3 172 4.73E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19030 5a66976f8e0cb5f5981df990493538f6 180 Pfam PF13521 AAA domain 5 168 8.1E-41 T 29-03-2018 AL539_RS19030 5a66976f8e0cb5f5981df990493538f6 180 Gene3D G3DSA:3.40.50.300 2 173 2.7E-12 T 29-03-2018 AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 438 1.3E-199 T 29-03-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 SUPERFAMILY SSF52540 95 364 1.19E-95 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 Gene3D G3DSA:3.40.50.300 56 358 5.3E-87 T 29-03-2018 AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 2.1E-9 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 4.2E-78 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 SMART SM00382 161 342 7.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS04410 0e1ca21694c9d3980109e7bdfd834f48 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 15 437 8.2E-174 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AL539_RS22285 5bd16cf06939f101dd3cf40fcc2cfdac 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 3.1E-28 T 29-03-2018 IPR009778 Modulator of Rho-dependent transcription termination AL539_RS22285 5bd16cf06939f101dd3cf40fcc2cfdac 81 Gene3D G3DSA:2.30.30.400 2 80 2.9E-23 T 29-03-2018 AL539_RS22285 5bd16cf06939f101dd3cf40fcc2cfdac 81 SUPERFAMILY SSF101744 1 80 1.31E-21 T 29-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AL539_RS24015 94ed88f80530dc83e84fa456b0fb3b04 489 Gene3D G3DSA:1.10.10.10 132 201 1.0E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS06540 5347d2e2eafff0791835b755f12fa809 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL539_RS06540 5347d2e2eafff0791835b755f12fa809 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 1.5E-303 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL539_RS06540 5347d2e2eafff0791835b755f12fa809 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.386 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 Gene3D G3DSA:2.60.40.1180 456 537 1.6E-11 T 29-03-2018 AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 Gene3D G3DSA:3.20.20.80 191 455 2.5E-29 T 29-03-2018 AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 SUPERFAMILY SSF51445 56 458 5.15E-68 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 SUPERFAMILY SSF51011 457 535 1.66E-8 T 29-03-2018 AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 Pfam PF00128 Alpha amylase, catalytic domain 88 174 5.0E-26 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 Pfam PF00128 Alpha amylase, catalytic domain 206 391 1.2E-14 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 SMART SM00642 62 448 1.0E-34 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL539_RS23210 7489bf173c686c988a958cca3e90486c 537 Gene3D G3DSA:3.20.20.80 24 190 1.0E-32 T 29-03-2018 AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 SUPERFAMILY SSF56176 500 571 1.06E-6 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 Pfam PF02080 TrkA-C domain 417 484 9.4E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 SMART SM01091 493 572 7.8E-8 T 29-03-2018 IPR005170 Transporter-associated domain AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 Gene3D G3DSA:3.30.465.10 490 574 1.3E-5 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 Gene3D G3DSA:3.30.70.1450 414 489 3.3E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 50.999 T 29-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 Pfam PF03471 Transporter associated domain 497 570 3.3E-6 T 29-03-2018 IPR005170 Transporter-associated domain AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.7E-56 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL539_RS10940 a34201308f381e571a587c42a1e4068c 583 SUPERFAMILY SSF116726 413 481 1.31E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL539_RS12195 ae60035dd3ba96077f666b315504031c 211 Gene3D G3DSA:3.40.50.150 4 211 1.3E-37 T 29-03-2018 AL539_RS12195 ae60035dd3ba96077f666b315504031c 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.669 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL539_RS12195 ae60035dd3ba96077f666b315504031c 211 SUPERFAMILY SSF53335 8 209 8.74E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS12195 ae60035dd3ba96077f666b315504031c 211 PIRSF PIRSF003078 2 211 1.3E-58 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL539_RS12195 ae60035dd3ba96077f666b315504031c 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 1.7E-57 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL539_RS12195 ae60035dd3ba96077f666b315504031c 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 5.1E-63 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL539_RS24800 4f27bebb057acf7623881200ead5fcaa 463 SUPERFAMILY SSF56954 8 448 2.09E-49 T 29-03-2018 AL539_RS24800 4f27bebb057acf7623881200ead5fcaa 463 Pfam PF02321 Outer membrane efflux protein 48 230 6.4E-5 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS24800 4f27bebb057acf7623881200ead5fcaa 463 Pfam PF02321 Outer membrane efflux protein 267 446 2.6E-17 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS24800 4f27bebb057acf7623881200ead5fcaa 463 Gene3D G3DSA:1.20.1600.10 32 448 8.4E-44 T 29-03-2018 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.01 T 29-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 Pfam PF00230 Major intrinsic protein 2 222 1.3E-46 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 2.0E-58 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 4.4E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 4.4E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 4.4E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 4.4E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 4.4E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 4.4E-50 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 SUPERFAMILY SSF81338 2 227 6.54E-67 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 Gene3D G3DSA:1.20.1080.10 1 230 7.8E-68 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL539_RS06985 c51ae18931454d061ddaf5bd21cb2b95 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS00300 20f6071986748424b1c13ebb3d8008bf 260 SUPERFAMILY SSF52540 1 259 2.72E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00300 20f6071986748424b1c13ebb3d8008bf 260 Pfam PF13614 AAA domain 3 185 4.0E-35 T 29-03-2018 IPR025669 AAA domain AL539_RS00300 20f6071986748424b1c13ebb3d8008bf 260 Gene3D G3DSA:3.40.50.300 1 260 1.5E-40 T 29-03-2018 AL539_RS24630 d7283a5449851cf62937bad05ad0935d 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 2.2E-34 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL539_RS24630 d7283a5449851cf62937bad05ad0935d 258 Gene3D G3DSA:3.20.20.150 1 258 5.6E-56 T 29-03-2018 AL539_RS24630 d7283a5449851cf62937bad05ad0935d 258 SUPERFAMILY SSF51658 1 258 6.91E-83 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL539_RS24630 d7283a5449851cf62937bad05ad0935d 258 PIRSF PIRSF006241 1 258 4.4E-98 T 29-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AL539_RS25900 6adadb7e27e23ffd9c28622d02e3d096 364 SUPERFAMILY SSF52518 22 357 1.4E-91 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AL539_RS25900 6adadb7e27e23ffd9c28622d02e3d096 364 Gene3D G3DSA:3.40.50.970 1 351 4.3E-79 T 29-03-2018 AL539_RS25900 6adadb7e27e23ffd9c28622d02e3d096 364 Pfam PF00676 Dehydrogenase E1 component 36 321 4.4E-75 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AL539_RS25900 6adadb7e27e23ffd9c28622d02e3d096 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 4.7E-135 T 29-03-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL539_RS21475 d805cd0809284ef8bd27dc87841da953 120 PIRSF PIRSF002889 1 120 1.5E-31 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL539_RS21475 d805cd0809284ef8bd27dc87841da953 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS21475 d805cd0809284ef8bd27dc87841da953 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 6.9E-33 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL539_RS21475 d805cd0809284ef8bd27dc87841da953 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 PIRSF PIRSF018282 1 445 1.8E-248 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.49 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 SUPERFAMILY SSF140570 124 286 3.27E-76 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 Pfam PF17193 MukF C-terminal domain 288 445 1.5E-77 T 29-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 Pfam PF17192 MukF middle domain 126 286 1.6E-78 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 Gene3D G3DSA:1.10.10.10 29 121 2.6E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 Pfam PF03882 MukF winged-helix domain 10 122 4.0E-53 T 29-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AL539_RS17705 a20c137259adc25f9bcd62da7dea892c 445 SUPERFAMILY SSF46785 13 123 1.14E-43 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07870 e13665cc267609cc8b8098f92ecd1b3c 231 Gene3D G3DSA:2.40.30.70 3 147 1.9E-51 T 29-03-2018 IPR023370 TsaA-like domain AL539_RS07870 e13665cc267609cc8b8098f92ecd1b3c 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 4.5E-39 T 29-03-2018 IPR023370 TsaA-like domain AL539_RS07870 e13665cc267609cc8b8098f92ecd1b3c 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 29-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AL539_RS07870 e13665cc267609cc8b8098f92ecd1b3c 231 SUPERFAMILY SSF118196 1 226 6.8E-79 T 29-03-2018 IPR023370 TsaA-like domain AL539_RS07870 e13665cc267609cc8b8098f92ecd1b3c 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 1.2E-48 T 29-03-2018 IPR023370 TsaA-like domain AL539_RS07870 e13665cc267609cc8b8098f92ecd1b3c 231 Gene3D G3DSA:3.30.2310.10 148 227 4.2E-24 T 29-03-2018 AL539_RS01485 61a745386ef965740a871169946f98f2 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 2.1E-67 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal AL539_RS01485 61a745386ef965740a871169946f98f2 449 Gene3D G3DSA:3.40.50.300 8 154 1.3E-30 T 29-03-2018 AL539_RS01485 61a745386ef965740a871169946f98f2 449 Gene3D G3DSA:1.20.272.10 253 347 2.6E-38 T 29-03-2018 AL539_RS01485 61a745386ef965740a871169946f98f2 449 Gene3D G3DSA:1.10.8.60 155 244 4.6E-19 T 29-03-2018 AL539_RS01485 61a745386ef965740a871169946f98f2 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.9E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL539_RS01485 61a745386ef965740a871169946f98f2 449 SMART SM00382 50 166 1.6E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS01485 61a745386ef965740a871169946f98f2 449 Gene3D G3DSA:1.10.3710.10 349 449 6.0E-33 T 29-03-2018 AL539_RS01485 61a745386ef965740a871169946f98f2 449 SUPERFAMILY SSF52540 11 236 1.22E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01485 61a745386ef965740a871169946f98f2 449 Pfam PF16193 AAA C-terminal domain 190 268 1.6E-21 T 29-03-2018 IPR032423 AAA C-terminal domain AL539_RS01485 61a745386ef965740a871169946f98f2 449 SUPERFAMILY SSF48019 253 435 2.72E-73 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 4.0E-126 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 Gene3D G3DSA:1.10.601.10 3 122 4.5E-35 T 29-03-2018 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.146 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 Gene3D G3DSA:1.10.10.10 223 283 1.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF04545 Sigma-70, region 4 229 279 7.7E-16 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 3.1E-33 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 SUPERFAMILY SSF88946 11 122 5.97E-40 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 SUPERFAMILY SSF88659 198 281 1.68E-18 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS11440 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.0E-9 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS13990 5e8b75a7afa7142e0a61a285f5247c10 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 1.5E-22 T 29-03-2018 IPR006869 Domain of unknown function DUF547 AL539_RS17960 ba1d9b23220eaf9b6b560e734976596a 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 9.8E-17 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS17960 ba1d9b23220eaf9b6b560e734976596a 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 1.1E-58 T 29-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AL539_RS17960 ba1d9b23220eaf9b6b560e734976596a 377 Gene3D G3DSA:3.60.21.10 74 267 5.9E-29 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS17960 ba1d9b23220eaf9b6b560e734976596a 377 Gene3D G3DSA:3.60.21.10 1 73 2.1E-15 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS17960 ba1d9b23220eaf9b6b560e734976596a 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 351 6.8E-9 T 29-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AL539_RS17960 ba1d9b23220eaf9b6b560e734976596a 377 SUPERFAMILY SSF56300 1 320 8.62E-61 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS25855 1043fc3d21e946f02b42f567e197bb1c 190 Gene3D G3DSA:2.60.130.10 15 169 1.4E-41 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AL539_RS25855 1043fc3d21e946f02b42f567e197bb1c 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AL539_RS25855 1043fc3d21e946f02b42f567e197bb1c 190 SUPERFAMILY SSF49482 18 189 2.09E-47 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AL539_RS25855 1043fc3d21e946f02b42f567e197bb1c 190 Pfam PF00775 Dioxygenase 32 156 2.0E-23 T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AL539_RS18355 8208a4b220236c82014f82c4ac536578 124 Pfam PF04076 Bacterial OB fold (BOF) protein 51 121 1.7E-9 T 29-03-2018 IPR005220 Bacterial OB-fold AL539_RS18355 8208a4b220236c82014f82c4ac536578 124 Gene3D G3DSA:2.40.50.200 18 124 2.9E-15 T 29-03-2018 AL539_RS18355 8208a4b220236c82014f82c4ac536578 124 SUPERFAMILY SSF101756 25 123 4.45E-22 T 29-03-2018 IPR005220 Bacterial OB-fold AL539_RS07490 c88ae4efe6a50f726a2c68d4bdefec21 110 Pfam PF13698 Domain of unknown function (DUF4156) 24 108 4.2E-24 T 29-03-2018 IPR025294 Protein of unknown function DUF4156 AL539_RS12720 0bc1dfc6b573f444b593adc87ccc42d7 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.4E-27 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL539_RS12720 0bc1dfc6b573f444b593adc87ccc42d7 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.4E-27 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL539_RS12720 0bc1dfc6b573f444b593adc87ccc42d7 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.4E-27 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AL539_RS12720 0bc1dfc6b573f444b593adc87ccc42d7 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 123 18.273 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL539_RS12720 0bc1dfc6b573f444b593adc87ccc42d7 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.7E-32 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL539_RS12720 0bc1dfc6b573f444b593adc87ccc42d7 132 Pfam PF02416 mttA/Hcf106 family 4 48 3.7E-5 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL539_RS24605 6633d8734bdd203b463961cad1c95e97 584 SUPERFAMILY SSF161098 397 560 1.7E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24605 6633d8734bdd203b463961cad1c95e97 584 Gene3D G3DSA:1.10.3720.10 331 582 4.5E-20 T 29-03-2018 AL539_RS24605 6633d8734bdd203b463961cad1c95e97 584 Gene3D G3DSA:1.10.3720.10 20 323 1.4E-18 T 29-03-2018 AL539_RS24605 6633d8734bdd203b463961cad1c95e97 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 318 4.5E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24605 6633d8734bdd203b463961cad1c95e97 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 416 582 1.3E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24605 6633d8734bdd203b463961cad1c95e97 584 SUPERFAMILY SSF161098 113 306 1.46E-7 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS00590 3d2718179a4a300d40252bb02740c78d 193 Gene3D G3DSA:1.10.4000.10 9 83 1.0E-11 T 29-03-2018 AL539_RS00590 3d2718179a4a300d40252bb02740c78d 193 Gene3D G3DSA:1.10.4000.10 99 187 1.2E-11 T 29-03-2018 AL539_RS00590 3d2718179a4a300d40252bb02740c78d 193 SUPERFAMILY SSF63592 101 171 8.63E-5 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.971 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.6E-138 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS16490 bdc057acc1e38d451bc605a32586b1f1 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 9.7E-86 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 30 478 5.9E-188 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 Pfam PF01225 Mur ligase family, catalytic domain 30 126 3.4E-28 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 Pfam PF08245 Mur ligase middle domain 132 312 4.9E-29 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 SUPERFAMILY SSF53623 113 327 1.03E-72 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 27 484 43.923 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 SUPERFAMILY SSF51984 28 114 3.53E-29 T 29-03-2018 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 SUPERFAMILY SSF53244 331 478 1.23E-48 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 422 3.6E-21 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 Gene3D G3DSA:3.40.1190.10 116 332 1.1E-52 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 Gene3D G3DSA:3.90.190.20 333 482 7.7E-36 T 29-03-2018 AL539_RS14585 d9e7e792ceaf5ae18e123ed3b0e99a61 490 Gene3D G3DSA:3.40.50.720 9 115 5.2E-18 T 29-03-2018 AL539_RS00670 6631518061b258c63b31db5f87d4aa0e 505 Pfam PF13817 IS66 C-terminal element 464 500 4.7E-8 T 29-03-2018 AL539_RS00670 6631518061b258c63b31db5f87d4aa0e 505 Pfam PF03050 Transposase IS66 family 174 457 1.8E-97 T 29-03-2018 IPR004291 Transposase, IS66 AL539_RS00670 6631518061b258c63b31db5f87d4aa0e 505 Pfam PF13005 zinc-finger binding domain of transposase IS66 110 154 8.7E-15 T 29-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AL539_RS00670 6631518061b258c63b31db5f87d4aa0e 505 Pfam PF13007 Transposase C of IS166 homeodomain 31 102 8.6E-14 T 29-03-2018 IPR024463 Transposase TnpC, homeodomain AL539_RS22585 d3938cf8b34a296452897bce5a132ff3 340 SMART SM00387 242 340 6.8E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22585 d3938cf8b34a296452897bce5a132ff3 340 Pfam PF06580 Histidine kinase 149 227 8.5E-23 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL539_RS22585 d3938cf8b34a296452897bce5a132ff3 340 Gene3D G3DSA:3.30.565.10 134 339 8.0E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22585 d3938cf8b34a296452897bce5a132ff3 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 339 5.1E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS22585 d3938cf8b34a296452897bce5a132ff3 340 SUPERFAMILY SSF55874 213 337 1.96E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 SUPERFAMILY SSF53383 130 562 2.41E-106 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 Gene3D G3DSA:3.40.640.10 130 424 3.1E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.8E-46 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 PIRSF PIRSF009393 1 711 1.3E-288 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 Gene3D G3DSA:3.90.1150.10 425 594 3.4E-56 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 SUPERFAMILY SSF55904 568 708 5.75E-43 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 Gene3D G3DSA:3.90.100.10 595 711 3.0E-36 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.5E-189 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL539_RS11100 78ac69135fee3c366ee4324873db16fc 711 Gene3D G3DSA:3.40.50.2300 15 129 0.0022 T 29-03-2018 AL539_RS17345 39ce1d093c46418eabea3170639194c5 139 Pfam PF00571 CBS domain 6 61 1.9E-7 T 29-03-2018 IPR000644 CBS domain AL539_RS17345 39ce1d093c46418eabea3170639194c5 139 Pfam PF00571 CBS domain 73 127 1.8E-12 T 29-03-2018 IPR000644 CBS domain AL539_RS17345 39ce1d093c46418eabea3170639194c5 139 SMART SM00116 13 61 0.049 T 29-03-2018 IPR000644 CBS domain AL539_RS17345 39ce1d093c46418eabea3170639194c5 139 SMART SM00116 80 128 1.0E-8 T 29-03-2018 IPR000644 CBS domain AL539_RS17345 39ce1d093c46418eabea3170639194c5 139 Gene3D G3DSA:3.10.580.10 1 137 1.6E-30 T 29-03-2018 AL539_RS17345 39ce1d093c46418eabea3170639194c5 139 SUPERFAMILY SSF54631 1 127 4.42E-31 T 29-03-2018 AL539_RS06135 c58870110ef5460a00e2497e38aeba70 354 SUPERFAMILY SSF111369 109 166 4.84E-6 T 29-03-2018 AL539_RS06135 c58870110ef5460a00e2497e38aeba70 354 SUPERFAMILY SSF111369 38 96 1.44E-9 T 29-03-2018 AL539_RS06135 c58870110ef5460a00e2497e38aeba70 354 Gene3D G3DSA:2.40.50.100 44 119 2.5E-15 T 29-03-2018 AL539_RS06135 c58870110ef5460a00e2497e38aeba70 354 SUPERFAMILY SSF111369 178 253 1.07E-5 T 29-03-2018 AL539_RS06135 c58870110ef5460a00e2497e38aeba70 354 Gene3D G3DSA:1.10.287.470 120 165 1.4E-11 T 29-03-2018 AL539_RS06135 c58870110ef5460a00e2497e38aeba70 354 Pfam PF13533 Biotin-lipoyl like 44 88 9.7E-17 T 29-03-2018 AL539_RS06135 c58870110ef5460a00e2497e38aeba70 354 Pfam PF13437 HlyD family secretion protein 200 268 3.1E-6 T 29-03-2018 AL539_RS01205 f646ae64ee0a4e6e908e87bada7dc31f 373 Gene3D G3DSA:3.90.350.10 101 305 8.5E-9 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AL539_RS01205 f646ae64ee0a4e6e908e87bada7dc31f 373 Pfam PF01609 Transposase DDE domain 103 335 2.6E-26 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL539_RS01205 f646ae64ee0a4e6e908e87bada7dc31f 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 8.0E-26 T 29-03-2018 IPR032806 H repeat-associated protein, N-terminal AL539_RS03395 a2fbd0d2a7f4864e7c6fa38ec87ea0bf 106 Pfam PF13466 STAS domain 19 95 2.7E-9 T 29-03-2018 IPR002645 STAS domain AL539_RS03395 a2fbd0d2a7f4864e7c6fa38ec87ea0bf 106 SUPERFAMILY SSF52091 6 101 7.46E-20 T 29-03-2018 IPR002645 STAS domain AL539_RS03395 a2fbd0d2a7f4864e7c6fa38ec87ea0bf 106 Gene3D G3DSA:3.30.750.24 1 105 1.5E-9 T 29-03-2018 IPR002645 STAS domain AL539_RS21235 993037631070937530f4b6ae55298d6b 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 283 3.0E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21235 993037631070937530f4b6ae55298d6b 299 Gene3D G3DSA:1.10.3720.10 55 293 1.6E-34 T 29-03-2018 AL539_RS21235 993037631070937530f4b6ae55298d6b 299 SUPERFAMILY SSF161098 99 281 3.92E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS23550 0ce6a7f0f32df2ea263c91095f5254d5 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.0E-24 T 29-03-2018 IPR021242 Protein of unknown function DUF2799 AL539_RS19310 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Pfam PF00884 Sulfatase 34 359 1.6E-65 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS19310 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Gene3D G3DSA:3.30.1120.10 396 492 5.0E-16 T 29-03-2018 AL539_RS19310 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Pfam PF14707 C-terminal region of aryl-sulfatase 399 500 4.5E-7 T 29-03-2018 AL539_RS19310 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Gene3D G3DSA:3.40.720.10 30 258 5.6E-53 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS19310 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Gene3D G3DSA:3.40.720.10 259 395 1.1E-29 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS19310 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 SUPERFAMILY SSF53649 30 482 9.3E-128 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 Gene3D G3DSA:3.40.50.150 156 560 2.0E-55 T 29-03-2018 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 158 174 2.3E-17 T 29-03-2018 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 267 279 2.3E-17 T 29-03-2018 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 329 353 2.3E-17 T 29-03-2018 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 196 2.3E-17 T 29-03-2018 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 Pfam PF02384 N-6 DNA Methylase 136 441 3.5E-54 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 Pfam PF12161 HsdM N-terminal domain 6 128 8.4E-17 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 SUPERFAMILY SSF53335 5 281 9.29E-111 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 SUPERFAMILY SSF53335 548 597 9.29E-111 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS14105 fc19bf529b57e2a588d8657946d16b3e 597 SUPERFAMILY SSF53335 321 491 9.29E-111 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS10440 a8977bcb658d40c4ab716d65c18cb929 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 29-03-2018 IPR013559 YheO-like AL539_RS10440 a8977bcb658d40c4ab716d65c18cb929 240 Pfam PF13309 HTH domain 174 231 1.8E-18 T 29-03-2018 AL539_RS10440 a8977bcb658d40c4ab716d65c18cb929 240 Pfam PF08348 YheO-like PAS domain 31 139 9.5E-36 T 29-03-2018 IPR013559 YheO-like AL539_RS10440 a8977bcb658d40c4ab716d65c18cb929 240 Gene3D G3DSA:1.10.10.60 187 240 6.1E-5 T 29-03-2018 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 PIRSF PIRSF000137 1 546 1.7E-148 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 SUPERFAMILY SSF51905 478 538 2.59E-84 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 SUPERFAMILY SSF51905 1 295 2.59E-84 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 558 59.731 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 SUPERFAMILY SSF54373 297 479 2.75E-61 T 29-03-2018 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 Gene3D G3DSA:3.30.560.10 314 494 2.0E-36 T 29-03-2018 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 Gene3D G3DSA:3.30.560.10 105 313 2.5E-68 T 29-03-2018 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 Pfam PF05199 GMC oxidoreductase 393 531 5.8E-40 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 Gene3D G3DSA:4.10.450.10 36 104 7.7E-27 T 29-03-2018 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 Pfam PF00732 GMC oxidoreductase 5 302 3.6E-87 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL539_RS19590 c94f0b1c59a828eb23902e916bd36e01 571 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 537 6.0E-234 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL539_RS08700 d9eed71763ee51e4972189c38cc6f3c1 204 Gene3D G3DSA:1.10.357.10 1 204 2.2E-31 T 29-03-2018 AL539_RS08700 d9eed71763ee51e4972189c38cc6f3c1 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS08700 d9eed71763ee51e4972189c38cc6f3c1 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS08700 d9eed71763ee51e4972189c38cc6f3c1 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS08700 d9eed71763ee51e4972189c38cc6f3c1 204 SUPERFAMILY SSF46689 8 84 7.98E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS08700 d9eed71763ee51e4972189c38cc6f3c1 204 SUPERFAMILY SSF48498 89 197 5.34E-10 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS06950 e3aeb6edc562b0c3404a260d51bdfd83 99 Pfam PF13467 Ribbon-helix-helix domain 16 82 9.2E-25 T 29-03-2018 IPR027373 Ribbon-helix-helix domain AL539_RS06950 e3aeb6edc562b0c3404a260d51bdfd83 99 Gene3D G3DSA:1.10.3990.20 11 95 6.8E-30 T 29-03-2018 AL539_RS20985 0f8cb758ae6d706ed7c8095adf5ac85f 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 1.2E-60 T 29-03-2018 IPR018636 Protein of unknown function DUF2058 AL539_RS09945 1ec7847d046e78a22ee229fc93fe952c 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.5E-28 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS09945 1ec7847d046e78a22ee229fc93fe952c 95 Gene3D G3DSA:3.30.160.100 1 95 9.0E-34 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS09945 1ec7847d046e78a22ee229fc93fe952c 95 SUPERFAMILY SSF69754 1 95 4.97E-35 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS09945 1ec7847d046e78a22ee229fc93fe952c 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.3E-34 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 8.0E-52 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 Gene3D G3DSA:1.10.285.10 3 57 4.2E-7 T 29-03-2018 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 Gene3D G3DSA:1.10.285.10 376 450 2.7E-24 T 29-03-2018 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 Gene3D G3DSA:3.40.50.720 206 375 1.3E-39 T 29-03-2018 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 Gene3D G3DSA:3.40.50.10860 58 187 1.3E-55 T 29-03-2018 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 SUPERFAMILY SSF51735 199 449 8.83E-70 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 6.8E-29 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 6.8E-29 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 6.8E-29 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 6.8E-29 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 PIRSF PIRSF000185 19 450 1.2E-113 T 29-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 SUPERFAMILY SSF53223 5 193 3.2E-73 T 29-03-2018 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 SMART SM00839 201 448 9.4E-76 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS19535 66e1fc8a09041383dfd4896c369f1432 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 448 4.4E-80 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 1.7E-45 T 29-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 SUPERFAMILY SSF48179 191 343 4.08E-56 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 6.6E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 6.6E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 6.6E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 6.6E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 6.6E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 6.6E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 SUPERFAMILY SSF51735 16 190 2.11E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.023 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 Gene3D G3DSA:3.40.50.720 10 190 5.8E-29 T 29-03-2018 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 PIRSF PIRSF000114 10 344 1.8E-95 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 2.7E-52 T 29-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AL539_RS10785 c77c97665215dcc876fa51d7354bbaf9 345 Gene3D G3DSA:1.10.1040.10 201 345 6.8E-54 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS09190 e21c1afb18aad1e70b9615062bc8f34d 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 1.0E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS09190 e21c1afb18aad1e70b9615062bc8f34d 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 29-03-2018 IPR010916 TonB box, conserved site AL539_RS09190 e21c1afb18aad1e70b9615062bc8f34d 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AL539_RS09190 e21c1afb18aad1e70b9615062bc8f34d 652 Gene3D G3DSA:2.40.170.20 167 652 8.1E-82 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS09190 e21c1afb18aad1e70b9615062bc8f34d 652 Gene3D G3DSA:2.170.130.10 23 163 1.8E-36 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS09190 e21c1afb18aad1e70b9615062bc8f34d 652 Pfam PF00593 TonB dependent receptor 194 650 2.5E-60 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS09190 e21c1afb18aad1e70b9615062bc8f34d 652 SUPERFAMILY SSF56935 33 652 7.73E-128 T 29-03-2018 AL539_RS10435 00144bc33faf672edfe8f97efd00fc17 131 Pfam PF02635 DsrE/DsrF-like family 6 131 2.1E-29 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL539_RS10435 00144bc33faf672edfe8f97efd00fc17 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 5.6E-55 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AL539_RS10435 00144bc33faf672edfe8f97efd00fc17 131 Gene3D G3DSA:3.40.1260.10 4 131 1.8E-30 T 29-03-2018 AL539_RS10435 00144bc33faf672edfe8f97efd00fc17 131 SUPERFAMILY SSF75169 6 131 5.3E-39 T 29-03-2018 IPR027396 DsrEFH-like AL539_RS12100 ca5ea1879c67aa95f4bd41c50b9d1296 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.8E-142 T 29-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AL539_RS12100 ca5ea1879c67aa95f4bd41c50b9d1296 312 Pfam PF01063 Amino-transferase class IV 36 268 2.3E-45 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL539_RS12100 ca5ea1879c67aa95f4bd41c50b9d1296 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL539_RS12100 ca5ea1879c67aa95f4bd41c50b9d1296 312 Gene3D G3DSA:3.30.470.10 1 142 1.1E-41 T 29-03-2018 AL539_RS12100 ca5ea1879c67aa95f4bd41c50b9d1296 312 Gene3D G3DSA:3.20.10.10 143 303 8.3E-52 T 29-03-2018 AL539_RS12100 ca5ea1879c67aa95f4bd41c50b9d1296 312 SUPERFAMILY SSF56752 7 307 1.18E-102 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 Pfam PF05552 Conserved TM helix 21 69 3.2E-12 T 29-03-2018 IPR008910 Conserved TM helix AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 29-03-2018 IPR010920 LSM domain AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 Gene3D G3DSA:3.30.70.100 186 279 5.4E-29 T 29-03-2018 AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 SUPERFAMILY SSF82861 33 118 1.44E-17 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 Gene3D G3DSA:2.30.30.60 135 185 6.7E-18 T 29-03-2018 AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 SUPERFAMILY SSF82689 187 284 1.27E-34 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL539_RS09170 67963b5be6738829c346c295f3ad5dd0 288 Pfam PF00924 Mechanosensitive ion channel 77 274 5.8E-59 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL539_RS08025 1f21412ee7ac39feeb9828a6a03f19b9 265 SUPERFAMILY SSF111364 30 265 3.53E-86 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL539_RS08025 1f21412ee7ac39feeb9828a6a03f19b9 265 Gene3D G3DSA:2.40.230.20 25 265 8.8E-88 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL539_RS08025 1f21412ee7ac39feeb9828a6a03f19b9 265 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 265 1.8E-99 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL539_RS04660 485880873d23b96ca066f24a77a7e199 389 Gene3D G3DSA:3.40.1090.10 62 347 5.2E-32 T 29-03-2018 AL539_RS04660 485880873d23b96ca066f24a77a7e199 389 Pfam PF01734 Patatin-like phospholipase 80 265 2.9E-19 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL539_RS04660 485880873d23b96ca066f24a77a7e199 389 SUPERFAMILY SSF52151 77 268 4.97E-34 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 Gene3D G3DSA:1.20.120.530 85 237 6.3E-34 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 SMART SM00895 92 219 3.0E-23 T 29-03-2018 IPR011711 GntR, C-terminal AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 Gene3D G3DSA:1.10.10.10 5 84 2.6E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 6.3E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 Pfam PF07729 FCD domain 92 217 4.1E-26 T 29-03-2018 IPR011711 GntR, C-terminal AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 5.0E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 5.0E-5 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 SUPERFAMILY SSF46785 16 110 1.73E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 SUPERFAMILY SSF48008 88 224 8.37E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_RS04305 cabcb1aa27f65f1e369f4cddfc19dce3 237 SMART SM00345 24 82 1.4E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL539_RS22620 68ab4c989ae3242d7a7bdb452fb0af07 238 Gene3D G3DSA:3.30.70.980 80 174 2.0E-24 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS22620 68ab4c989ae3242d7a7bdb452fb0af07 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.093 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS22620 68ab4c989ae3242d7a7bdb452fb0af07 238 Pfam PF01709 Transcriptional regulator 5 236 4.3E-71 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS22620 68ab4c989ae3242d7a7bdb452fb0af07 238 Gene3D G3DSA:3.30.70.980 175 238 3.6E-10 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS22620 68ab4c989ae3242d7a7bdb452fb0af07 238 Gene3D G3DSA:1.10.10.200 21 74 1.3E-20 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AL539_RS22620 68ab4c989ae3242d7a7bdb452fb0af07 238 SUPERFAMILY SSF75625 1 237 2.75E-75 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS22995 578b8756b72527836d9ca6ff44d15735 663 Pfam PF01136 Peptidase family U32 78 293 4.5E-65 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL539_RS22995 578b8756b72527836d9ca6ff44d15735 663 Pfam PF01136 Peptidase family U32 447 592 7.7E-9 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 28.901 T 29-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 Pfam PF01197 Ribosomal protein L31 1 79 2.8E-27 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.0E-18 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 SUPERFAMILY SSF143800 1 81 5.1E-23 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-16 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.4E-16 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS07865 5b03fb0843b858fd0a7b97155c3210d7 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.4E-16 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS10015 d0217e79dcdf9e548e9d27cfcaf6847f 1293 Pfam PF13502 AsmA-like C-terminal region 1031 1271 8.3E-57 T 29-03-2018 IPR032712 AsmA-like, C-terminal AL539_RS10015 d0217e79dcdf9e548e9d27cfcaf6847f 1293 Gene3D G3DSA:3.15.10.10 980 1177 0.096 T 29-03-2018 AL539_RS10015 d0217e79dcdf9e548e9d27cfcaf6847f 1293 Pfam PF13116 Protein of unknown function 506 792 9.8E-93 T 29-03-2018 IPR025263 Domain of unknown function DUF3971 AL539_RS10015 d0217e79dcdf9e548e9d27cfcaf6847f 1293 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1281 0.0 T 29-03-2018 IPR011836 Conserved hypothetical protein CHP02099 AL539_RS07360 0aef92c42d88250acaffe270db8c2c0f 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 1.2E-22 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL539_RS07360 0aef92c42d88250acaffe270db8c2c0f 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 7.4E-20 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL539_RS07675 43979b79813b84a4119b1c8f2977702a 104 Pfam PF00034 Cytochrome c 30 104 3.4E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS07675 43979b79813b84a4119b1c8f2977702a 104 Gene3D G3DSA:1.10.760.10 7 103 2.2E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS07675 43979b79813b84a4119b1c8f2977702a 104 PRINTS PR00605 Class IC cytochrome C signature 78 100 7.7E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL539_RS07675 43979b79813b84a4119b1c8f2977702a 104 PRINTS PR00605 Class IC cytochrome C signature 33 44 7.7E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL539_RS07675 43979b79813b84a4119b1c8f2977702a 104 SUPERFAMILY SSF46626 4 104 6.11E-24 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS21605 9de6c49f338f3d83e32bd200a51143a4 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 1.5E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS21605 9de6c49f338f3d83e32bd200a51143a4 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 1.0E-8 T 29-03-2018 IPR023214 HAD-like domain AL539_RS21605 9de6c49f338f3d83e32bd200a51143a4 271 Gene3D G3DSA:3.40.50.1000 91 260 2.9E-18 T 29-03-2018 IPR023214 HAD-like domain AL539_RS21605 9de6c49f338f3d83e32bd200a51143a4 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 142.533 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL539_RS21605 9de6c49f338f3d83e32bd200a51143a4 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 2.5E-117 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL539_RS21605 9de6c49f338f3d83e32bd200a51143a4 271 SUPERFAMILY SSF56784 6 260 8.58E-52 T 29-03-2018 IPR023214 HAD-like domain AL539_RS21605 9de6c49f338f3d83e32bd200a51143a4 271 Gene3D G3DSA:1.10.150.240 24 90 8.8E-31 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_RS24025 9064d5b36dc51508f43bdbd4633e20de 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 1.7E-43 T 29-03-2018 IPR013560 Domain of unknown function DUF1722 AL539_RS24025 9064d5b36dc51508f43bdbd4633e20de 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 1.5E-36 T 29-03-2018 IPR007553 Domain of unknown function DUF523 AL539_RS24025 9064d5b36dc51508f43bdbd4633e20de 316 PIRSF PIRSF037004 1 316 3.8E-138 T 29-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 AL539_RS20235 d27cc9b56b4e2e1a09faba091794860d 701 Pfam PF16130 Domain of unknown function (DUF4842) 473 690 8.0E-60 T 29-03-2018 IPR032295 Domain of unknown function DUF4842 AL539_RS20235 d27cc9b56b4e2e1a09faba091794860d 701 TIGRFAM TIGR04456 LruC_dom: LruC domain 440 691 7.7E-86 T 29-03-2018 IPR031025 LruC domain AL539_RS20235 d27cc9b56b4e2e1a09faba091794860d 701 Gene3D G3DSA:2.120.10.30 31 244 5.1E-12 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL539_RS20235 d27cc9b56b4e2e1a09faba091794860d 701 SUPERFAMILY SSF101898 43 230 1.49E-14 T 29-03-2018 AL539_RS12990 0ec10ff5b674fbe5f48eb7be8c97ad89 131 Pfam PF06476 Protein of unknown function (DUF1090) 18 119 1.1E-33 T 29-03-2018 IPR009468 Protein of unknown function DUF1090 AL539_RS09615 16b512687f99b264cea1e9ad400d9ea2 90 Gene3D G3DSA:1.10.3880.10 2 89 1.5E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL539_RS09615 16b512687f99b264cea1e9ad400d9ea2 90 SUPERFAMILY SSF111148 1 89 1.7E-40 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL539_RS09615 16b512687f99b264cea1e9ad400d9ea2 90 PIRSF PIRSF029827 1 90 1.5E-43 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL539_RS09615 16b512687f99b264cea1e9ad400d9ea2 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 8.6E-42 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL539_RS09615 16b512687f99b264cea1e9ad400d9ea2 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.339 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL539_RS09615 16b512687f99b264cea1e9ad400d9ea2 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL539_RS24555 974639bc6332887ba9b4777211553c42 456 SUPERFAMILY SSF102114 60 439 4.45E-81 T 29-03-2018 AL539_RS24555 974639bc6332887ba9b4777211553c42 456 Pfam PF04055 Radical SAM superfamily 67 237 8.0E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS24555 974639bc6332887ba9b4777211553c42 456 SMART SM00729 62 285 6.5E-43 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AL539_RS24555 974639bc6332887ba9b4777211553c42 456 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 5.9E-178 T 29-03-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW AL539_RS24555 974639bc6332887ba9b4777211553c42 456 Gene3D G3DSA:3.20.20.70 43 372 8.1E-30 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS24715 66a93e469ea75664d443bfcadcb0526c 654 Gene3D G3DSA:1.20.91.10 248 332 3.9E-12 T 29-03-2018 AL539_RS24715 66a93e469ea75664d443bfcadcb0526c 654 SUPERFAMILY SSF51735 420 560 9.68E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS24715 66a93e469ea75664d443bfcadcb0526c 654 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 3.9E-73 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AL539_RS24715 66a93e469ea75664d443bfcadcb0526c 654 Pfam PF02254 TrkA-N domain 422 534 2.7E-25 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL539_RS24715 66a93e469ea75664d443bfcadcb0526c 654 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 4.9E-57 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL539_RS24715 66a93e469ea75664d443bfcadcb0526c 654 Gene3D G3DSA:3.40.50.720 416 580 5.8E-18 T 29-03-2018 AL539_RS05325 2b5c02cdb6dcf4084846ba5a3126000b 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 4.8E-12 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS15685 8a9f1fc6056f6637847a7d99c29bf17a 619 Gene3D G3DSA:3.40.50.300 18 605 1.2E-9 T 29-03-2018 AL539_RS15685 8a9f1fc6056f6637847a7d99c29bf17a 619 SUPERFAMILY SSF52540 23 310 3.99E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19780 42998ebeda3dbe014f7a884de0f8f51e 400 SUPERFAMILY SSF56801 116 340 8.24E-30 T 29-03-2018 AL539_RS19780 42998ebeda3dbe014f7a884de0f8f51e 400 Pfam PF00501 AMP-binding enzyme 123 275 1.2E-12 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS19780 42998ebeda3dbe014f7a884de0f8f51e 400 Gene3D G3DSA:3.40.50.980 101 250 1.3E-12 T 29-03-2018 AL539_RS24720 3079e37ede0ea8e54dca54dfd78c226f 205 SUPERFAMILY SSF52218 4 180 7.12E-50 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS24720 3079e37ede0ea8e54dca54dfd78c226f 205 Gene3D G3DSA:3.40.50.360 1 183 5.0E-37 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS24720 3079e37ede0ea8e54dca54dfd78c226f 205 Pfam PF02525 Flavodoxin-like fold 4 173 1.2E-44 T 29-03-2018 IPR003680 Flavodoxin-like fold AL539_RS06180 51a968963576fd4d5003545120d92b23 423 Gene3D G3DSA:1.20.1600.10 22 413 7.0E-72 T 29-03-2018 AL539_RS06180 51a968963576fd4d5003545120d92b23 423 SUPERFAMILY SSF56954 6 412 1.7E-77 T 29-03-2018 AL539_RS06180 51a968963576fd4d5003545120d92b23 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.2E-26 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS06180 51a968963576fd4d5003545120d92b23 423 Pfam PF02321 Outer membrane efflux protein 28 204 6.7E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS25010 602720fde680c8ffb08bb120a33b4bdf 204 Gene3D G3DSA:3.90.850.10 6 200 3.5E-45 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL539_RS25010 602720fde680c8ffb08bb120a33b4bdf 204 SUPERFAMILY SSF56529 12 186 1.01E-46 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL539_RS25010 602720fde680c8ffb08bb120a33b4bdf 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 195 9.3E-28 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 7.5E-69 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 4.9E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 4.9E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 4.9E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 4.9E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 4.9E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 4.9E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 Gene3D G3DSA:1.20.1080.10 3 260 2.2E-78 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 Pfam PF00230 Major intrinsic protein 6 252 4.3E-64 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AL539_RS08160 196a87d3ba4bd89a3ab745f6647eede6 284 SUPERFAMILY SSF81338 9 254 4.32E-75 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL539_RS10835 8c6c97925595fbff4efb1cf9783d7e6a 125 SUPERFAMILY SSF81343 7 125 4.14E-51 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS10835 8c6c97925595fbff4efb1cf9783d7e6a 125 PIRSF PIRSF000179 6 125 1.4E-56 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL539_RS10835 8c6c97925595fbff4efb1cf9783d7e6a 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 3.0E-49 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL539_RS10835 8c6c97925595fbff4efb1cf9783d7e6a 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.916 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL539_RS10835 8c6c97925595fbff4efb1cf9783d7e6a 125 Gene3D G3DSA:1.20.1300.10 6 125 7.1E-24 T 29-03-2018 AL539_RS10835 8c6c97925595fbff4efb1cf9783d7e6a 125 Pfam PF02313 Fumarate reductase subunit D 11 123 3.6E-44 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL539_RS22415 bb2aa1f312a4937aa0be3e50abe16971 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 2 94 24.242 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AL539_RS22415 bb2aa1f312a4937aa0be3e50abe16971 94 SUPERFAMILY SSF51182 3 93 2.71E-33 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS22415 bb2aa1f312a4937aa0be3e50abe16971 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 2.5E-34 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AL539_RS22415 bb2aa1f312a4937aa0be3e50abe16971 94 Gene3D G3DSA:2.60.120.10 4 93 1.0E-35 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 29-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 SUPERFAMILY SSF63737 7 192 1.7E-45 T 29-03-2018 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 Gene3D G3DSA:1.10.390.10 279 442 3.4E-50 T 29-03-2018 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 Gene3D G3DSA:1.25.50.10 545 867 2.5E-117 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 Pfam PF01433 Peptidase family M1 domain 208 435 1.5E-57 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 SUPERFAMILY SSF55486 202 449 6.11E-75 T 29-03-2018 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 1.6E-33 T 29-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 Gene3D G3DSA:2.60.40.1730 15 193 5.0E-32 T 29-03-2018 AL539_RS03915 bd95ef96d485573615d277816a9cd123 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 1.8E-113 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL539_RS02520 4b7cf7c08b123c9dfe198fe11084f372 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 265 6.3E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02520 4b7cf7c08b123c9dfe198fe11084f372 282 Gene3D G3DSA:1.10.3720.10 14 278 1.0E-43 T 29-03-2018 AL539_RS02520 4b7cf7c08b123c9dfe198fe11084f372 282 SUPERFAMILY SSF161098 12 279 3.4E-55 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04015 95c5e88a6dcd525d9afcda2b03a17091 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 29-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 AL539_RS04015 95c5e88a6dcd525d9afcda2b03a17091 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 6.7E-39 T 29-03-2018 IPR006214 Bax inhibitor 1-related AL539_RS02410 cd479dafbfb0f16998aa8b3e0080c526 342 Gene3D G3DSA:3.40.630.10 47 310 9.0E-21 T 29-03-2018 AL539_RS02410 cd479dafbfb0f16998aa8b3e0080c526 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 8.4E-70 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS02410 cd479dafbfb0f16998aa8b3e0080c526 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 132.727 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL539_RS02410 cd479dafbfb0f16998aa8b3e0080c526 342 PIRSF PIRSF017020 4 336 7.7E-126 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL539_RS02410 cd479dafbfb0f16998aa8b3e0080c526 342 SUPERFAMILY SSF53187 9 329 1.5E-75 T 29-03-2018 AL539_RS15850 d6b37128137a06f3a4e65b49e1b8ee76 429 Pfam PF00860 Permease family 17 391 1.1E-55 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS15850 d6b37128137a06f3a4e65b49e1b8ee76 429 PIRSF PIRSF005353 1 429 4.9E-188 T 29-03-2018 IPR026033 Purine permease PbuG-like AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 Gene3D G3DSA:1.20.1640.10 823 1047 5.8E-36 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 Gene3D G3DSA:1.20.1640.10 287 510 3.4E-46 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 SUPERFAMILY SSF82693 46 127 3.14E-20 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 Gene3D G3DSA:3.30.2090.10 183 271 2.6E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 Gene3D G3DSA:3.30.70.1430 45 142 1.4E-19 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 SUPERFAMILY SSF82714 185 269 3.27E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 SUPERFAMILY SSF82714 716 800 3.4E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 SUPERFAMILY SSF82866 798 1035 2.09E-51 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 SUPERFAMILY SSF82693 271 328 1.26E-22 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 SUPERFAMILY SSF82693 137 184 1.26E-22 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 SUPERFAMILY SSF82866 294 498 9.42E-43 T 29-03-2018 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.2E-32 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 7.2E-32 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 7.2E-32 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.2E-32 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 7.2E-32 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.2E-32 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 7.2E-32 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 Gene3D G3DSA:3.30.2090.10 716 802 2.1E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 2.2E-247 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AL539_RS24790 63a92e9ec6ede5d7a1c1dea39396507e 1059 Gene3D G3DSA:3.30.70.1430 560 658 3.5E-11 T 29-03-2018 AL539_RS06650 1d9c85430fa9ea42b9490e14e0d4617c 159 SUPERFAMILY SSF55040 11 155 1.96E-61 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL539_RS06650 1d9c85430fa9ea42b9490e14e0d4617c 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.0E-71 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AL539_RS06650 1d9c85430fa9ea42b9490e14e0d4617c 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.907 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AL539_RS06650 1d9c85430fa9ea42b9490e14e0d4617c 159 Pfam PF01967 MoaC family 15 150 1.0E-55 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL539_RS06650 1d9c85430fa9ea42b9490e14e0d4617c 159 Gene3D G3DSA:3.30.70.640 2 158 4.9E-69 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AL539_RS06265 26768ed0252088ba10852ee8287637c6 192 SUPERFAMILY SSF159594 28 191 6.8E-29 T 29-03-2018 AL539_RS06265 26768ed0252088ba10852ee8287637c6 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 189 1.7E-36 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AL539_RS06265 26768ed0252088ba10852ee8287637c6 192 Gene3D G3DSA:3.40.50.10610 14 192 1.5E-36 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AL539_RS06720 fe887bc68fe818041be93c201295c94b 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 6.5E-65 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS06720 fe887bc68fe818041be93c201295c94b 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 8.7E-88 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AL539_RS06720 fe887bc68fe818041be93c201295c94b 230 PIRSF PIRSF006102 1 220 3.3E-77 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS06720 fe887bc68fe818041be93c201295c94b 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.969 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AL539_RS05850 eb9a45db6611d589ca3fa5959676d4b8 93 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 5.1E-9 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS05850 eb9a45db6611d589ca3fa5959676d4b8 93 SUPERFAMILY SSF54292 3 81 1.57E-18 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS05850 eb9a45db6611d589ca3fa5959676d4b8 93 Gene3D G3DSA:3.10.20.30 1 93 1.7E-15 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS05850 eb9a45db6611d589ca3fa5959676d4b8 93 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL539_RS07610 6ca4f5404aa8f17505cf0b8594373314 591 Pfam PF01740 STAS domain 451 543 2.7E-16 T 29-03-2018 IPR002645 STAS domain AL539_RS07610 6ca4f5404aa8f17505cf0b8594373314 591 Gene3D G3DSA:3.30.750.24 425 559 6.7E-20 T 29-03-2018 IPR002645 STAS domain AL539_RS07610 6ca4f5404aa8f17505cf0b8594373314 591 SUPERFAMILY SSF52091 450 540 4.51E-13 T 29-03-2018 IPR002645 STAS domain AL539_RS07610 6ca4f5404aa8f17505cf0b8594373314 591 Pfam PF00916 Sulfate permease family 28 393 2.4E-83 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL539_RS08555 00999d1d9c89d52999f1ab6c493feb78 579 Pfam PF00759 Glycosyl hydrolase family 9 98 500 1.7E-23 T 29-03-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL539_RS08555 00999d1d9c89d52999f1ab6c493feb78 579 SUPERFAMILY SSF81296 2 88 1.75E-14 T 29-03-2018 IPR014756 Immunoglobulin E-set AL539_RS08555 00999d1d9c89d52999f1ab6c493feb78 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 1.3E-10 T 29-03-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AL539_RS08555 00999d1d9c89d52999f1ab6c493feb78 579 SUPERFAMILY SSF48208 84 565 1.02E-93 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS08555 00999d1d9c89d52999f1ab6c493feb78 579 Gene3D G3DSA:1.50.10.10 96 567 1.5E-65 T 29-03-2018 AL539_RS08555 00999d1d9c89d52999f1ab6c493feb78 579 Gene3D G3DSA:2.60.40.10 2 92 1.1E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 SUPERFAMILY SSF103473 5 370 4.05E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 PRINTS PR01035 Tetracycline resistance protein signature 39 58 1.4E-8 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 PRINTS PR01035 Tetracycline resistance protein signature 293 313 1.4E-8 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 PRINTS PR01035 Tetracycline resistance protein signature 127 149 1.4E-8 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 PRINTS PR01035 Tetracycline resistance protein signature 237 257 1.4E-8 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 PRINTS PR01035 Tetracycline resistance protein signature 97 118 1.4E-8 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 Gene3D G3DSA:1.20.1250.20 187 373 3.2E-14 T 29-03-2018 AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 Pfam PF07690 Major Facilitator Superfamily 7 315 5.5E-35 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS11030 93086cb339f02eea3c90a21cc13bf102 385 Gene3D G3DSA:1.20.1250.20 3 186 2.0E-27 T 29-03-2018 AL539_RS00575 d6cdeaf3c941b9c394385311f338c494 325 Gene3D G3DSA:3.30.420.40 2 176 3.9E-25 T 29-03-2018 AL539_RS00575 d6cdeaf3c941b9c394385311f338c494 325 SUPERFAMILY SSF53067 171 324 3.37E-15 T 29-03-2018 AL539_RS00575 d6cdeaf3c941b9c394385311f338c494 325 Gene3D G3DSA:3.30.420.40 177 308 4.2E-7 T 29-03-2018 AL539_RS00575 d6cdeaf3c941b9c394385311f338c494 325 SUPERFAMILY SSF53067 1 158 1.17E-28 T 29-03-2018 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 Gene3D G3DSA:3.40.50.1360 73 239 9.1E-34 T 29-03-2018 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 SMART SM00420 6 58 9.8E-19 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 SUPERFAMILY SSF100950 75 233 2.93E-26 T 29-03-2018 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 SMART SM01134 73 233 5.8E-62 T 29-03-2018 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 Pfam PF00455 DeoR C terminal sensor domain 75 232 9.8E-48 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.4E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 SUPERFAMILY SSF46785 5 58 4.37E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 Gene3D G3DSA:1.10.10.10 1 61 2.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24610 406bf1beb78a0934c47c599ea4e4233f 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL539_RS20325 cff34560e2b4f82197f44b8bbead6bc9 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 7.0E-25 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL539_RS20325 cff34560e2b4f82197f44b8bbead6bc9 154 Gene3D G3DSA:3.40.140.10 1 152 4.7E-32 T 29-03-2018 AL539_RS20325 cff34560e2b4f82197f44b8bbead6bc9 154 PIRSF PIRSF006019 1 147 1.8E-43 T 29-03-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL539_RS20325 cff34560e2b4f82197f44b8bbead6bc9 154 SUPERFAMILY SSF53927 8 142 3.81E-31 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS20325 cff34560e2b4f82197f44b8bbead6bc9 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL539_RS06870 124494ddfb486e1c43d3919d576d8c5d 182 Gene3D G3DSA:3.40.109.10 1 182 2.3E-34 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS06870 124494ddfb486e1c43d3919d576d8c5d 182 Pfam PF00881 Nitroreductase family 8 161 9.9E-24 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL539_RS06870 124494ddfb486e1c43d3919d576d8c5d 182 PIRSF PIRSF000232 1 182 3.5E-63 T 29-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AL539_RS06870 124494ddfb486e1c43d3919d576d8c5d 182 SUPERFAMILY SSF55469 1 181 2.22E-42 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS10455 d2415ea40ef245a1bfcbf468d1c72765 75 Gene3D G3DSA:1.20.5.300 7 52 3.4E-16 T 29-03-2018 AL539_RS10455 d2415ea40ef245a1bfcbf468d1c72765 75 Pfam PF04102 SlyX 9 75 9.1E-24 T 29-03-2018 IPR007236 SlyX AL539_RS10455 d2415ea40ef245a1bfcbf468d1c72765 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.417 T 29-03-2018 IPR007236 SlyX AL539_RS14420 d95e51d4e1f2152bb8b9e6d48208cb92 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 2.0E-23 T 29-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AL539_RS14420 d95e51d4e1f2152bb8b9e6d48208cb92 268 Gene3D G3DSA:3.60.21.10 2 259 2.1E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS14420 d95e51d4e1f2152bb8b9e6d48208cb92 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 8.2E-15 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS14420 d95e51d4e1f2152bb8b9e6d48208cb92 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 41.681 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AL539_RS14420 d95e51d4e1f2152bb8b9e6d48208cb92 268 SUPERFAMILY SSF56300 6 244 1.41E-56 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS17875 4c240389465f4ba302e06d910e096761 430 Pfam PF09850 Type VI secretion system protein DotU 51 252 1.5E-55 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AL539_RS17875 4c240389465f4ba302e06d910e096761 430 Gene3D G3DSA:3.30.1330.60 256 430 4.7E-30 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS17875 4c240389465f4ba302e06d910e096761 430 SUPERFAMILY SSF103088 310 426 1.12E-25 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS17875 4c240389465f4ba302e06d910e096761 430 Pfam PF00691 OmpA family 322 420 3.5E-15 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS17875 4c240389465f4ba302e06d910e096761 430 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 291 426 7.5E-44 T 29-03-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain AL539_RS17875 4c240389465f4ba302e06d910e096761 430 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 49 258 8.5E-66 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AL539_RS23595 6e8710870f665f99360bf59cbd1985ae 157 Pfam PF04982 HPP family 34 144 6.7E-34 T 29-03-2018 IPR007065 HPP AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 Pfam PF08238 Sel1 repeat 74 106 0.19 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 Pfam PF08238 Sel1 repeat 109 143 1.3E-4 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 SUPERFAMILY SSF81901 64 177 8.24E-22 T 29-03-2018 AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 SMART SM00671 108 143 3.2E-5 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 SMART SM00671 72 107 0.011 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 SMART SM00671 144 179 38.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 Gene3D G3DSA:2.60.40.1180 44 120 8.4E-11 T 29-03-2018 AL539_RS10615 a32d466f68cbcb00f8a036ec47b9dc41 211 Gene3D G3DSA:2.60.40.1180 121 211 3.1E-14 T 29-03-2018 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 227 238 - T 29-03-2018 IPR033116 Serine proteases, trypsin family, serine active site AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 Pfam PF00089 Trypsin 38 278 1.9E-41 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 SUPERFAMILY SSF50494 1 282 4.61E-60 T 29-03-2018 IPR009003 Peptidase S1, PA clan AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 29-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 Gene3D G3DSA:2.40.10.10 75 146 4.4E-16 T 29-03-2018 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 Gene3D G3DSA:2.40.10.10 38 74 1.3E-12 T 29-03-2018 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 Gene3D G3DSA:2.40.10.10 147 286 2.4E-31 T 29-03-2018 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 134 148 7.3E-13 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 226 238 7.3E-13 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 70 85 7.3E-13 T 29-03-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL539_RS23750 2cb62e1fc97a4f15fdedec4df2e711e5 352 SMART SM00020 37 278 2.6E-48 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL539_RS16655 557e4c3f2f33034e2069f90a02f73f0c 292 Gene3D G3DSA:1.10.10.10 3 113 1.2E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16655 557e4c3f2f33034e2069f90a02f73f0c 292 SMART SM00862 30 107 1.8E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS16655 557e4c3f2f33034e2069f90a02f73f0c 292 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 1.4E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS16655 557e4c3f2f33034e2069f90a02f73f0c 292 SUPERFAMILY SSF46894 10 107 3.68E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS08695 7985a6a7fbfb21f8bcd6a5768528cc69 176 Gene3D G3DSA:3.40.50.2020 2 176 3.1E-46 T 29-03-2018 AL539_RS08695 7985a6a7fbfb21f8bcd6a5768528cc69 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 1.1E-24 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL539_RS08695 7985a6a7fbfb21f8bcd6a5768528cc69 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.1E-74 T 29-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AL539_RS08695 7985a6a7fbfb21f8bcd6a5768528cc69 176 SUPERFAMILY SSF53271 3 175 1.1E-55 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS07385 33ff2c0cc82239c2e952b21c228f2550 104 Gene3D G3DSA:3.30.70.100 2 103 8.5E-14 T 29-03-2018 AL539_RS07385 33ff2c0cc82239c2e952b21c228f2550 104 Pfam PF07978 NIPSNAP 5 74 1.4E-6 T 29-03-2018 IPR012577 NIPSNAP AL539_RS07385 33ff2c0cc82239c2e952b21c228f2550 104 SUPERFAMILY SSF54909 3 96 1.53E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 PRINTS PR01171 Bacterial lipocalin signature 48 64 1.0E-33 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 PRINTS PR01171 Bacterial lipocalin signature 101 115 1.0E-33 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 PRINTS PR01171 Bacterial lipocalin signature 133 144 1.0E-33 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 PRINTS PR01171 Bacterial lipocalin signature 160 170 1.0E-33 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 PRINTS PR01171 Bacterial lipocalin signature 31 45 1.0E-33 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 PRINTS PR01171 Bacterial lipocalin signature 67 76 1.0E-33 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 Gene3D G3DSA:2.40.128.20 1 173 1.6E-42 T 29-03-2018 IPR012674 Calycin AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 Pfam PF08212 Lipocalin-like domain 31 171 5.2E-38 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 SUPERFAMILY SSF50814 7 172 9.35E-49 T 29-03-2018 IPR012674 Calycin AL539_RS17975 cdecadaa227af1178201c3c605fc6410 177 PIRSF PIRSF036893 1 177 7.3E-46 T 29-03-2018 IPR022271 Lipocalin, ApoD type AL539_RS09975 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Gene3D G3DSA:1.10.60.30 30 98 3.2E-27 T 29-03-2018 AL539_RS09975 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.976 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AL539_RS09975 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Gene3D G3DSA:1.10.60.30 103 174 4.4E-25 T 29-03-2018 AL539_RS09975 188f1bf42ca3f25f5e09f93aa9eb68ea 175 SUPERFAMILY SSF158710 28 170 3.53E-52 T 29-03-2018 IPR023153 PSPTO4464-like domain AL539_RS09975 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 7.3E-56 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AL539_RS09975 188f1bf42ca3f25f5e09f93aa9eb68ea 175 PIRSF PIRSF016183 1 174 6.8E-72 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 SMART SM00419 172 218 8.0E-4 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 6.1E-5 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 6.1E-5 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 Gene3D G3DSA:1.10.10.10 142 231 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 Gene3D G3DSA:2.60.120.10 1 141 5.7E-24 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 SUPERFAMILY SSF51206 1 142 6.68E-26 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 Pfam PF00027 Cyclic nucleotide-binding domain 34 119 3.1E-13 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 SUPERFAMILY SSF46785 149 227 8.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 Pfam PF13545 Crp-like helix-turn-helix domain 151 225 2.5E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL539_RS05995 82b3d5b22db05626dfb1c4770f30d158 231 SMART SM00100 13 131 1.6E-7 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AL539_RS25670 184851deddfa7d7ba6e36264e66668b1 202 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 196 1.5E-40 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS25670 184851deddfa7d7ba6e36264e66668b1 202 Pfam PF01914 MarC family integral membrane protein 4 199 2.9E-46 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 Gene3D G3DSA:2.40.50.100 4 153 9.9E-22 T 29-03-2018 AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 SUPERFAMILY SSF51230 78 153 1.83E-26 T 29-03-2018 IPR011053 Single hybrid motif AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 5.4E-19 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 5.4E-19 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 5.4E-19 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 Pfam PF00364 Biotin-requiring enzyme 78 152 1.7E-25 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AL539_RS11000 940b5af3330751b8b7216453be27e0b0 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 5.8E-63 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL539_RS25775 9a4d057cd42db74441d9e5f46b9ccf3c 288 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.967 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL539_RS25775 9a4d057cd42db74441d9e5f46b9ccf3c 288 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 276 7.4E-83 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL539_RS25775 9a4d057cd42db74441d9e5f46b9ccf3c 288 Pfam PF01040 UbiA prenyltransferase family 18 269 6.9E-54 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL539_RS25775 9a4d057cd42db74441d9e5f46b9ccf3c 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 Gene3D G3DSA:1.10.287.950 436 663 5.6E-52 T 29-03-2018 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 Gene3D G3DSA:1.20.1170.10 30 309 0.023 T 29-03-2018 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 2.7E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 SMART SM00283 401 662 3.4E-75 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 SMART SM00304 334 386 1.9E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 5.5E-6 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 5.5E-6 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 Gene3D G3DSA:1.10.287.850 355 435 0.023 T 29-03-2018 AL539_RS17365 678b3caad92f7024caf0ac1c18afa3fa 663 SUPERFAMILY SSF58104 354 663 3.92E-73 T 29-03-2018 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 246 329 8.6E-29 T 29-03-2018 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 29-03-2018 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 4 89 1.0E-19 T 29-03-2018 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 119 232 3.1E-27 T 29-03-2018 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 53 3.53E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS13650 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 180 234 3.53E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 Gene3D G3DSA:3.30.565.10 274 437 6.4E-50 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 4.7E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 4.7E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 4.7E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 4.7E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 2.4E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 Gene3D G3DSA:1.10.287.130 204 273 1.4E-18 T 29-03-2018 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 2.1E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 SMART SM00388 214 279 6.5E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 SMART SM00387 326 437 4.9E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 Gene3D G3DSA:3.30.450.40 8 152 8.7E-4 T 29-03-2018 IPR029016 GAF domain-like AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 Gene3D G3DSA:3.40.50.2300 451 573 1.5E-39 T 29-03-2018 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 SUPERFAMILY SSF52172 456 572 5.12E-36 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 Pfam PF00072 Response regulator receiver domain 459 570 6.8E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 SMART SM00448 456 569 9.6E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 SUPERFAMILY SSF47384 200 280 2.75E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS03825 7aec2dadcdefaac272050580a7432499 573 SUPERFAMILY SSF55874 268 436 1.24E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS02860 0f1d7376290bb59431ff01930b5937e8 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 290 3.2E-52 T 29-03-2018 AL539_RS02860 0f1d7376290bb59431ff01930b5937e8 309 SUPERFAMILY SSF53850 24 274 2.79E-22 T 29-03-2018 AL539_RS02860 0f1d7376290bb59431ff01930b5937e8 309 Gene3D G3DSA:3.40.190.10 123 288 2.1E-17 T 29-03-2018 AL539_RS02860 0f1d7376290bb59431ff01930b5937e8 309 Gene3D G3DSA:3.40.190.10 38 118 0.009 T 29-03-2018 AL539_RS01220 398bee2cfba4258a81b14db14a834cfb 926 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 460 616 9.1E-14 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AL539_RS01220 398bee2cfba4258a81b14db14a834cfb 926 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 764 838 6.5E-26 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AL539_RS01220 398bee2cfba4258a81b14db14a834cfb 926 Gene3D G3DSA:1.20.120.20 366 746 1.2E-4 T 29-03-2018 AL539_RS07135 d143a43b4495c6a39c99ab950e500061 176 Pfam PF01713 Smr domain 97 171 1.9E-17 T 29-03-2018 IPR002625 Smr domain AL539_RS07135 d143a43b4495c6a39c99ab950e500061 176 SUPERFAMILY SSF160443 95 171 2.35E-11 T 29-03-2018 IPR002625 Smr domain AL539_RS07135 d143a43b4495c6a39c99ab950e500061 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.541 T 29-03-2018 IPR022990 Uncharacterised protein family UPF0115 AL539_RS07135 d143a43b4495c6a39c99ab950e500061 176 SMART SM00463 94 172 3.4E-16 T 29-03-2018 IPR002625 Smr domain AL539_RS02555 0189dbcd3f43cc639faec73b960ef00f 306 Gene3D G3DSA:1.10.3720.10 4 294 3.0E-39 T 29-03-2018 AL539_RS02555 0189dbcd3f43cc639faec73b960ef00f 306 SUPERFAMILY SSF161098 91 290 9.29E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02555 0189dbcd3f43cc639faec73b960ef00f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 7.6E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS23835 beb47e1baf2f96a4b5e56f79073a9c2a 321 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 128 302 1.0E-16 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS23835 beb47e1baf2f96a4b5e56f79073a9c2a 321 SUPERFAMILY SSF53850 21 303 1.47E-37 T 29-03-2018 AL539_RS23835 beb47e1baf2f96a4b5e56f79073a9c2a 321 SMART SM00062 49 305 6.7E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS23835 beb47e1baf2f96a4b5e56f79073a9c2a 321 Gene3D G3DSA:3.40.190.10 205 302 2.6E-10 T 29-03-2018 AL539_RS23835 beb47e1baf2f96a4b5e56f79073a9c2a 321 Gene3D G3DSA:3.40.190.10 39 186 6.3E-22 T 29-03-2018 AL539_RS21820 9a4319dff86b7c6986ab490e6c62b312 462 Gene3D G3DSA:1.20.1250.20 13 359 3.9E-4 T 29-03-2018 AL539_RS21820 9a4319dff86b7c6986ab490e6c62b312 462 PIRSF PIRSF006446 1 459 1.9E-205 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS21820 9a4319dff86b7c6986ab490e6c62b312 462 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 435 3.8E-168 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 Gene3D G3DSA:3.50.50.60 1 362 5.0E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 1.2E-17 T 29-03-2018 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-17 T 29-03-2018 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 1.2E-17 T 29-03-2018 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-17 T 29-03-2018 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 Pfam PF01494 FAD binding domain 4 341 4.0E-25 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 SUPERFAMILY SSF51905 3 175 1.01E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 SUPERFAMILY SSF51905 273 384 1.01E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS16155 06ebc2eb63452ba288ed656dc90b5230 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 1.6E-107 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL539_RS21660 330ff5f732242d0fb3574a48f6efd891 447 Gene3D G3DSA:2.40.160.60 24 447 5.5E-75 T 29-03-2018 AL539_RS21660 330ff5f732242d0fb3574a48f6efd891 447 SUPERFAMILY SSF56935 24 85 1.28E-88 T 29-03-2018 AL539_RS21660 330ff5f732242d0fb3574a48f6efd891 447 SUPERFAMILY SSF56935 117 447 1.28E-88 T 29-03-2018 AL539_RS21660 330ff5f732242d0fb3574a48f6efd891 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 447 2.0E-104 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL539_RS10755 bc43574a0ff75d4b68ed09fc2ba441b4 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.922 T 29-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AL539_RS10755 bc43574a0ff75d4b68ed09fc2ba441b4 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 4.8E-62 T 29-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL539_RS10755 bc43574a0ff75d4b68ed09fc2ba441b4 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 5.3E-88 T 29-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 SUPERFAMILY SSF88946 6 87 4.32E-16 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 Gene3D G3DSA:1.10.1740.10 2 78 1.5E-14 T 29-03-2018 AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 Pfam PF08281 Sigma-70, region 4 103 153 2.5E-10 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 Pfam PF04542 Sigma-70 region 2 14 75 6.0E-13 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 SUPERFAMILY SSF88659 99 155 1.81E-11 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 154 2.2E-17 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 Gene3D G3DSA:1.10.10.10 94 161 8.8E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22885 f9b573ae2b3ecab869968821f9292c2d 161 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.747 T 29-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 Gene3D G3DSA:1.25.40.10 36 121 1.9E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.021 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 Gene3D G3DSA:1.25.40.10 212 269 1.2E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 Gene3D G3DSA:1.25.40.10 122 211 1.1E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 Gene3D G3DSA:1.25.40.10 270 354 0.059 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 SUPERFAMILY SSF81901 39 274 1.86E-20 T 29-03-2018 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 Pfam PF14559 Tetratricopeptide repeat 194 248 5.6E-6 T 29-03-2018 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 35 68 430.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 182 215 0.088 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 216 249 21.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS06290 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 69 102 81.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS19320 616f8053c25a8b0c3739370bc0320d35 515 Pfam PF14707 C-terminal region of aryl-sulfatase 396 470 6.4E-8 T 29-03-2018 AL539_RS19320 616f8053c25a8b0c3739370bc0320d35 515 Gene3D G3DSA:3.30.1120.10 393 490 1.1E-21 T 29-03-2018 AL539_RS19320 616f8053c25a8b0c3739370bc0320d35 515 Pfam PF00884 Sulfatase 31 356 3.4E-61 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS19320 616f8053c25a8b0c3739370bc0320d35 515 Gene3D G3DSA:3.40.720.10 27 253 2.2E-47 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS19320 616f8053c25a8b0c3739370bc0320d35 515 Gene3D G3DSA:3.40.720.10 254 392 2.6E-33 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS19320 616f8053c25a8b0c3739370bc0320d35 515 SUPERFAMILY SSF53649 27 507 9.45E-127 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS23300 f83590be619c009283eb0d7a28c9f6ed 238 Pfam PF13462 Thioredoxin 77 234 3.9E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS23300 f83590be619c009283eb0d7a28c9f6ed 238 SUPERFAMILY SSF52833 69 233 1.92E-31 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS23300 f83590be619c009283eb0d7a28c9f6ed 238 Gene3D G3DSA:3.40.30.10 66 238 4.7E-29 T 29-03-2018 AL539_RS08345 a0246ca5c347ce32dffe9aa7cd1b1ddc 177 SUPERFAMILY SSF55718 46 141 1.44E-20 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS08345 a0246ca5c347ce32dffe9aa7cd1b1ddc 177 Gene3D G3DSA:3.30.1050.10 21 150 4.2E-17 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS08345 a0246ca5c347ce32dffe9aa7cd1b1ddc 177 Pfam PF02036 SCP-2 sterol transfer family 44 136 4.9E-19 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS08345 a0246ca5c347ce32dffe9aa7cd1b1ddc 177 PIRSF PIRSF025550 3 176 7.1E-86 T 29-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AL539_RS09285 f832157e8cf9cce0eabdd877fb83681e 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 4.9E-65 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AL539_RS09285 f832157e8cf9cce0eabdd877fb83681e 200 Gene3D G3DSA:3.90.950.10 1 199 2.0E-81 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS09285 f832157e8cf9cce0eabdd877fb83681e 200 Pfam PF01725 Ham1 family 4 191 7.0E-58 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AL539_RS09285 f832157e8cf9cce0eabdd877fb83681e 200 SUPERFAMILY SSF52972 1 195 7.59E-74 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_RS09285 f832157e8cf9cce0eabdd877fb83681e 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.994 T 29-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 AL539_RS13475 3e467119c51592ecc128238999264c0e 157 SUPERFAMILY SSF102712 52 124 7.45E-6 T 29-03-2018 AL539_RS13475 3e467119c51592ecc128238999264c0e 157 Pfam PF04002 RadC-like JAB domain 39 155 1.2E-43 T 29-03-2018 IPR025657 RadC-like JAB domain AL539_RS13475 3e467119c51592ecc128238999264c0e 157 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL539_RS13475 3e467119c51592ecc128238999264c0e 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 21 157 3.1E-44 T 29-03-2018 IPR001405 RadC protein AL539_RS13475 3e467119c51592ecc128238999264c0e 157 Gene3D G3DSA:3.40.140.10 33 157 2.7E-44 T 29-03-2018 AL539_RS17210 86a3845006525324471f769b17db3cf2 475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 29-03-2018 IPR020845 AMP-binding, conserved site AL539_RS17210 86a3845006525324471f769b17db3cf2 475 Pfam PF00501 AMP-binding enzyme 16 377 3.6E-46 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AL539_RS17210 86a3845006525324471f769b17db3cf2 475 Gene3D G3DSA:3.40.50.980 166 308 3.4E-29 T 29-03-2018 AL539_RS17210 86a3845006525324471f769b17db3cf2 475 SUPERFAMILY SSF56801 13 470 1.31E-79 T 29-03-2018 AL539_RS17210 86a3845006525324471f769b17db3cf2 475 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 465 1.1E-126 T 29-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AL539_RS17210 86a3845006525324471f769b17db3cf2 475 Gene3D G3DSA:3.30.300.30 372 475 1.0E-17 T 29-03-2018 AL539_RS17210 86a3845006525324471f769b17db3cf2 475 Gene3D G3DSA:3.40.50.980 5 165 5.7E-22 T 29-03-2018 AL539_RS17210 86a3845006525324471f769b17db3cf2 475 Gene3D G3DSA:2.30.38.10 309 371 0.0013 T 29-03-2018 AL539_RS22900 d3fb3a3427bc60d145defafec27bad5a 318 Gene3D G3DSA:3.40.190.10 175 265 9.8E-21 T 29-03-2018 AL539_RS22900 d3fb3a3427bc60d145defafec27bad5a 318 SUPERFAMILY SSF53850 90 297 4.34E-42 T 29-03-2018 AL539_RS22900 d3fb3a3427bc60d145defafec27bad5a 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.2E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22900 d3fb3a3427bc60d145defafec27bad5a 318 Gene3D G3DSA:3.40.190.10 89 174 4.8E-12 T 29-03-2018 AL539_RS22900 d3fb3a3427bc60d145defafec27bad5a 318 Gene3D G3DSA:1.10.10.10 3 84 7.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22900 d3fb3a3427bc60d145defafec27bad5a 318 Pfam PF03466 LysR substrate binding domain 89 293 2.9E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS22900 d3fb3a3427bc60d145defafec27bad5a 318 SUPERFAMILY SSF46785 3 112 5.16E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS08900 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL539_RS08900 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL539_RS08900 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL539_RS08900 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL539_RS08900 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.524 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AL539_RS11975 75ada1a3b1212f56f6f5a57d1cf5e55f 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.075 T 29-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AL539_RS11975 75ada1a3b1212f56f6f5a57d1cf5e55f 185 Gene3D G3DSA:3.90.870.10 1 185 1.8E-56 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS11975 75ada1a3b1212f56f6f5a57d1cf5e55f 185 Pfam PF01300 Telomere recombination 10 185 7.3E-51 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AL539_RS11975 75ada1a3b1212f56f6f5a57d1cf5e55f 185 SUPERFAMILY SSF55821 2 182 5.49E-59 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_RS11975 75ada1a3b1212f56f6f5a57d1cf5e55f 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 1.1E-40 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AL539_RS13865 9b7b205b410eebfe667f6d38721a380d 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 1.0E-101 T 29-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 AL539_RS13865 9b7b205b410eebfe667f6d38721a380d 234 Gene3D G3DSA:3.40.50.300 1 233 2.0E-58 T 29-03-2018 AL539_RS13865 9b7b205b410eebfe667f6d38721a380d 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS13865 9b7b205b410eebfe667f6d38721a380d 234 Pfam PF00005 ABC transporter 18 157 7.9E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS13865 9b7b205b410eebfe667f6d38721a380d 234 SUPERFAMILY SSF52540 1 231 5.33E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13865 9b7b205b410eebfe667f6d38721a380d 234 SMART SM00382 24 209 5.1E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 Pfam PF13437 HlyD family secretion protein 301 408 6.9E-18 T 29-03-2018 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 Gene3D G3DSA:2.40.50.100 72 331 3.0E-16 T 29-03-2018 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 SUPERFAMILY SSF111369 72 127 3.27E-5 T 29-03-2018 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 Pfam PF13533 Biotin-lipoyl like 79 112 7.6E-7 T 29-03-2018 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 2.7E-40 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 2.7E-40 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 2.7E-40 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 2.7E-40 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 2.7E-40 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 2.7E-40 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL539_RS24170 2f029f416a37c7e993235ffead7bfd33 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 446 7.4E-100 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL539_RS04170 2447a46f05ed0429be5ec8d7528f1c38 364 SUPERFAMILY SSF103473 229 363 1.44E-6 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS04170 2447a46f05ed0429be5ec8d7528f1c38 364 SUPERFAMILY SSF103473 84 151 1.44E-6 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS04170 2447a46f05ed0429be5ec8d7528f1c38 364 Pfam PF03773 Predicted permease 10 359 1.7E-61 T 29-03-2018 IPR005524 Predicted permease DUF318 AL539_RS16485 10ed2814a8981689ede391d133a60088 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.773 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS16485 10ed2814a8981689ede391d133a60088 259 Pfam PF02107 Flagellar L-ring protein 80 257 1.8E-57 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS16485 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 9.5E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS16485 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 9.5E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS16485 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 9.5E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS16485 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 9.5E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS16485 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 9.5E-21 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL539_RS25620 c1d6de456b211fdeae9352d7e4c46696 444 Gene3D G3DSA:2.30.40.10 3 69 4.5E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS25620 c1d6de456b211fdeae9352d7e4c46696 444 Gene3D G3DSA:3.20.20.140 70 391 2.1E-93 T 29-03-2018 AL539_RS25620 c1d6de456b211fdeae9352d7e4c46696 444 SUPERFAMILY SSF51556 55 371 3.74E-89 T 29-03-2018 IPR032466 Metal-dependent hydrolase AL539_RS25620 c1d6de456b211fdeae9352d7e4c46696 444 SUPERFAMILY SSF51338 1 54 1.12E-30 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS25620 c1d6de456b211fdeae9352d7e4c46696 444 SUPERFAMILY SSF51338 370 434 1.12E-30 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AL539_RS25620 c1d6de456b211fdeae9352d7e4c46696 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL539_RS25620 c1d6de456b211fdeae9352d7e4c46696 444 Pfam PF01979 Amidohydrolase family 51 424 3.5E-18 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AL539_RS09270 2dcc2af71ca35e8be66c83ef9f022e77 185 Pfam PF02325 YGGT family 109 173 7.1E-19 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 AL539_RS09270 2dcc2af71ca35e8be66c83ef9f022e77 185 Pfam PF02325 YGGT family 10 78 2.2E-19 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 3.6E-111 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.9E-9 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 Gene3D G3DSA:1.20.140.10 301 449 7.4E-17 T 29-03-2018 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 SUPERFAMILY SSF47203 301 453 1.26E-20 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.8E-8 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 Gene3D G3DSA:2.40.110.10 177 299 6.7E-19 T 29-03-2018 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 7.2E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 Gene3D G3DSA:1.10.540.10 17 176 1.1E-27 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS02020 0b55f992f301802ed6f52fb05da79b78 760 SUPERFAMILY SSF56645 61 296 3.01E-46 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 Gene3D G3DSA:3.40.50.2300 55 174 6.9E-29 T 29-03-2018 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.7E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 Gene3D G3DSA:3.40.50.2300 175 306 1.0E-43 T 29-03-2018 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 SUPERFAMILY SSF47413 2 59 1.13E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 Pfam PF13377 Periplasmic binding protein-like domain 168 325 1.8E-30 T 29-03-2018 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 SUPERFAMILY SSF53822 61 326 5.78E-68 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 Gene3D G3DSA:1.10.260.40 2 54 5.3E-22 T 29-03-2018 AL539_RS09745 7b0ad2c94cb0ea962c59338414d126b9 332 SMART SM00354 1 71 5.7E-31 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 SUPERFAMILY SSF52540 353 512 1.01E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 SMART SM00382 360 521 1.2E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 SMART SM00382 28 215 3.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 Gene3D G3DSA:3.40.50.300 281 517 3.5E-33 T 29-03-2018 AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 Gene3D G3DSA:3.40.50.300 1 275 1.6E-37 T 29-03-2018 AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 Pfam PF00005 ABC transporter 354 480 1.8E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 Pfam PF00005 ABC transporter 29 170 1.8E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24730 8887f3576225c88b8cfd3ce5bab8bd89 523 SUPERFAMILY SSF52540 3 237 3.6E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 SUPERFAMILY SSF81324 28 239 1.41E-50 T 29-03-2018 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 Gene3D G3DSA:1.10.287.70 154 202 2.3E-13 T 29-03-2018 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 Gene3D G3DSA:1.20.120.350 25 153 2.7E-29 T 29-03-2018 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 Gene3D G3DSA:1.20.5.110 204 239 7.2E-12 T 29-03-2018 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 Pfam PF00520 Ion transport protein 28 239 1.8E-30 T 29-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 21 49 7.7E-36 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 212 238 7.7E-36 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 63 86 7.7E-36 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 89 109 7.7E-36 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 125 151 7.7E-36 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 183 205 7.7E-36 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS06805 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 154 177 7.7E-36 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF08180 B melanoma antigen family 9 36 4.8E-15 T 29-03-2018 IPR012530 B melanoma antigen AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 8.2E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 Gene3D G3DSA:2.30.42.10 246 339 1.9E-12 T 29-03-2018 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 Gene3D G3DSA:3.90.226.10 340 625 5.9E-55 T 29-03-2018 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF03572 Peptidase family S41 356 525 1.3E-51 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 8.7E-113 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 SMART SM00228 246 323 4.8E-7 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 SMART SM00245 326 527 4.7E-61 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 SUPERFAMILY SSF50156 217 338 4.15E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 5.2E-39 T 29-03-2018 IPR020992 Tail specific protease, C-terminal AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 SUPERFAMILY SSF52096 166 264 6.46E-73 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 SUPERFAMILY SSF52096 350 532 6.46E-73 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS03925 431aec90375e9a74fa22008a792b7d2b 668 Gene3D G3DSA:3.30.750.44 155 245 6.6E-24 T 29-03-2018 AL539_RS06735 0a52d1ada8c1d71ca0bb47372b51e605 144 Gene3D G3DSA:1.25.40.10 1 126 1.9E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS06735 0a52d1ada8c1d71ca0bb47372b51e605 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 1.0E-70 T 29-03-2018 IPR020206 Uncharacterised protein family, VP2110 AL539_RS06735 0a52d1ada8c1d71ca0bb47372b51e605 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 2.3E-76 T 29-03-2018 IPR020206 Uncharacterised protein family, VP2110 AL539_RS17685 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 1.3E-36 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL539_RS17685 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 SUPERFAMILY SSF89155 8 212 3.01E-51 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL539_RS17685 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 Gene3D G3DSA:1.10.3480.10 1 214 1.9E-45 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AL539_RS17685 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.85 T 29-03-2018 IPR023069 Chaperone TorD AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.2E-63 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 Pfam PF07549 SecD/SecF GG Motif 29 55 2.2E-8 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 Gene3D G3DSA:1.20.1640.10 88 286 1.7E-25 T 29-03-2018 AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 4.4E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 4.4E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 4.4E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 4.4E-24 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 Pfam PF02355 Protein export membrane protein 100 284 2.1E-53 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 108 274 1.7E-45 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 21.496 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL539_RS20415 9015b187ff4423192022fd1950b011d8 300 SUPERFAMILY SSF82866 81 283 5.23E-35 T 29-03-2018 AL539_RS19345 4055c476d6246ab8e8b9042fa371c4a6 334 Gene3D G3DSA:3.40.50.2300 29 150 3.2E-14 T 29-03-2018 AL539_RS19345 4055c476d6246ab8e8b9042fa371c4a6 334 Gene3D G3DSA:3.40.50.2300 151 299 3.1E-17 T 29-03-2018 AL539_RS19345 4055c476d6246ab8e8b9042fa371c4a6 334 SUPERFAMILY SSF53822 32 296 5.5E-38 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS19345 4055c476d6246ab8e8b9042fa371c4a6 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 323 1.8E-33 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL539_RS19345 4055c476d6246ab8e8b9042fa371c4a6 334 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 32 330 1.1E-131 T 29-03-2018 IPR014301 TMAO reductase system, periplasmic protein TorT AL539_RS14025 44d2fde2434f8f094975be851426dbb9 182 SMART SM00014 71 177 1.4E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS14025 44d2fde2434f8f094975be851426dbb9 182 Gene3D G3DSA:1.20.144.10 18 179 4.3E-28 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS14025 44d2fde2434f8f094975be851426dbb9 182 SUPERFAMILY SSF48317 12 179 1.83E-36 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS14025 44d2fde2434f8f094975be851426dbb9 182 Pfam PF01569 PAP2 superfamily 67 179 6.9E-18 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS19890 09a75f294ba1e5ec6e4acc047e28221a 311 SUPERFAMILY SSF52402 151 309 1.09E-20 T 29-03-2018 AL539_RS19890 09a75f294ba1e5ec6e4acc047e28221a 311 Gene3D G3DSA:3.40.50.620 3 145 3.8E-8 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS19890 09a75f294ba1e5ec6e4acc047e28221a 311 SUPERFAMILY SSF52402 1 142 1.34E-10 T 29-03-2018 AL539_RS19890 09a75f294ba1e5ec6e4acc047e28221a 311 Gene3D G3DSA:3.40.50.620 146 310 1.3E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS19890 09a75f294ba1e5ec6e4acc047e28221a 311 Pfam PF00582 Universal stress protein family 151 301 3.0E-16 T 29-03-2018 IPR006016 UspA GO:0006950 AL539_RS04610 b665168d3be244d561831549fd597bf1 711 Gene3D G3DSA:2.170.130.10 24 169 2.1E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS04610 b665168d3be244d561831549fd597bf1 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 3.3E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AL539_RS04610 b665168d3be244d561831549fd597bf1 711 Gene3D G3DSA:2.40.170.20 170 711 2.3E-85 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS04610 b665168d3be244d561831549fd597bf1 711 SUPERFAMILY SSF56935 26 711 2.59E-132 T 29-03-2018 AL539_RS04610 b665168d3be244d561831549fd597bf1 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 711 2.3E-124 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AL539_RS04610 b665168d3be244d561831549fd597bf1 711 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 29-03-2018 IPR010916 TonB box, conserved site AL539_RS04610 b665168d3be244d561831549fd597bf1 711 Pfam PF00593 TonB dependent receptor 229 710 3.1E-52 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AL539_RS17665 6a94091975d45a23bac44bbfcde47a72 106 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 29-03-2018 IPR001876 Zinc finger, RanBP2-type AL539_RS17665 6a94091975d45a23bac44bbfcde47a72 106 Gene3D G3DSA:3.30.70.790 1 63 4.1E-12 T 29-03-2018 AL539_RS17665 6a94091975d45a23bac44bbfcde47a72 106 Gene3D G3DSA:4.10.1060.10 64 102 4.8E-5 T 29-03-2018 AL539_RS17665 6a94091975d45a23bac44bbfcde47a72 106 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 3.1E-6 T 29-03-2018 IPR018551 Domain of unknown function DUF2007 AL539_RS25615 8c9ab34148585076dee9446846ec1f09 156 Pfam PF01475 Ferric uptake regulator family 22 142 2.1E-11 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL539_RS25615 8c9ab34148585076dee9446846ec1f09 156 SUPERFAMILY SSF46785 13 149 6.03E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS25615 8c9ab34148585076dee9446846ec1f09 156 Gene3D G3DSA:1.10.10.10 1 94 8.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07105 658d7980eecfb5a75e823be6a5b22bdd 87 Pfam PF08891 YfcL protein 4 84 3.1E-33 T 29-03-2018 IPR014987 Uncharacterised protein family YfcL AL539_RS21515 5f5483c434e44fc6fd2a516593114580 280 Gene3D G3DSA:3.40.50.620 3 135 9.0E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS21515 5f5483c434e44fc6fd2a516593114580 280 Pfam PF02698 DUF218 domain 6 132 3.5E-15 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AL539_RS18570 607312800c31af4826d3802e2d34e6e0 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 1.8E-98 T 29-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS18570 607312800c31af4826d3802e2d34e6e0 399 Gene3D G3DSA:3.40.50.720 12 307 5.1E-5 T 29-03-2018 AL539_RS18570 607312800c31af4826d3802e2d34e6e0 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 4.8E-34 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS18570 607312800c31af4826d3802e2d34e6e0 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 52.15 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS18570 607312800c31af4826d3802e2d34e6e0 399 SUPERFAMILY SSF51735 41 158 2.07E-5 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS18570 607312800c31af4826d3802e2d34e6e0 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 3.5E-25 T 29-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS04725 c3970cd6a0e6f66c23e47b76449fab73 208 Pfam PF01810 LysE type translocator 15 204 5.7E-29 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS02400 c67c796418d35ddbc2e51a53f918d3e4 204 SUPERFAMILY SSF53254 1 188 1.58E-37 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AL539_RS02400 c67c796418d35ddbc2e51a53f918d3e4 204 SMART SM00855 5 154 2.0E-12 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL539_RS02400 c67c796418d35ddbc2e51a53f918d3e4 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 187 6.8E-38 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL539_RS02400 c67c796418d35ddbc2e51a53f918d3e4 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 181 5.1E-49 T 29-03-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02400 c67c796418d35ddbc2e51a53f918d3e4 204 Gene3D G3DSA:3.40.50.1240 1 199 6.9E-42 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AL539_RS22395 96c06fc0066960db2f9f7413509f7f2a 559 SUPERFAMILY SSF55120 350 556 1.39E-57 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS22395 96c06fc0066960db2f9f7413509f7f2a 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS22395 96c06fc0066960db2f9f7413509f7f2a 559 Gene3D G3DSA:1.20.1170.10 81 287 0.0013 T 29-03-2018 AL539_RS22395 96c06fc0066960db2f9f7413509f7f2a 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 2.5E-28 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS22395 96c06fc0066960db2f9f7413509f7f2a 559 Gene3D G3DSA:3.30.2350.10 355 558 3.2E-58 T 29-03-2018 AL539_RS24895 19523b81291f62613a0ab01c25253649 322 SUPERFAMILY SSF51430 8 314 9.3E-67 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS24895 19523b81291f62613a0ab01c25253649 322 Gene3D G3DSA:3.20.20.100 3 314 6.0E-66 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS24895 19523b81291f62613a0ab01c25253649 322 Pfam PF00248 Aldo/keto reductase family 18 309 7.2E-54 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS07755 25ea07c6229ce1fe624595960c703d8e 241 Pfam PF00696 Amino acid kinase family 11 219 4.7E-27 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS07755 25ea07c6229ce1fe624595960c703d8e 241 SUPERFAMILY SSF53633 7 239 4.71E-72 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AL539_RS07755 25ea07c6229ce1fe624595960c703d8e 241 PIRSF PIRSF005650 4 241 7.4E-89 T 29-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AL539_RS07755 25ea07c6229ce1fe624595960c703d8e 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.054 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL539_RS07755 25ea07c6229ce1fe624595960c703d8e 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.6E-102 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL539_RS07755 25ea07c6229ce1fe624595960c703d8e 241 Gene3D G3DSA:3.40.1160.10 2 241 6.3E-44 T 29-03-2018 AL539_RS12870 b03778092373190f34e68a419910c51b 542 SUPERFAMILY SSF53795 230 541 9.94E-128 T 29-03-2018 AL539_RS12870 b03778092373190f34e68a419910c51b 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 4.0E-212 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL539_RS12870 b03778092373190f34e68a419910c51b 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.155 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL539_RS12870 b03778092373190f34e68a419910c51b 542 Gene3D G3DSA:3.90.228.20 309 539 9.7E-93 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL539_RS12870 b03778092373190f34e68a419910c51b 542 Gene3D G3DSA:3.90.228.20 229 308 2.8E-28 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL539_RS12870 b03778092373190f34e68a419910c51b 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 29-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL539_RS12870 b03778092373190f34e68a419910c51b 542 PIRSF PIRSF006294 4 541 1.0E-227 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL539_RS12870 b03778092373190f34e68a419910c51b 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-277 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL539_RS12870 b03778092373190f34e68a419910c51b 542 SUPERFAMILY SSF68923 11 228 2.09E-89 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL539_RS12870 b03778092373190f34e68a419910c51b 542 Gene3D G3DSA:3.40.449.10 25 227 1.8E-78 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL539_RS21280 a9a020d66884246f00b9bcb94119edb9 172 Pfam PF05433 Glycine zipper 2TM domain 67 108 3.7E-9 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL539_RS15960 1ceb0ff7d901354e43169a1960c9488f 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 8.4E-29 T 29-03-2018 IPR006696 Protein of unknown function DUF423 AL539_RS08505 c5c617c2dcbf5a351b3f082b23f81b04 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL539_RS08505 c5c617c2dcbf5a351b3f082b23f81b04 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 2.7E-36 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL539_RS08505 c5c617c2dcbf5a351b3f082b23f81b04 113 SUPERFAMILY SSF89360 7 99 3.53E-29 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS08505 c5c617c2dcbf5a351b3f082b23f81b04 113 Gene3D G3DSA:2.60.300.12 8 113 4.0E-36 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS08505 c5c617c2dcbf5a351b3f082b23f81b04 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.5E-17 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL539_RS08505 c5c617c2dcbf5a351b3f082b23f81b04 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.764 T 29-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AL539_RS11340 06e280483ca1d28d4b98f9e089ec8d66 151 SUPERFAMILY SSF54928 49 142 3.09E-27 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL539_RS11340 06e280483ca1d28d4b98f9e089ec8d66 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 1.2E-17 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL539_RS11340 06e280483ca1d28d4b98f9e089ec8d66 151 Gene3D G3DSA:3.30.70.330 45 150 1.3E-25 T 29-03-2018 AL539_RS11340 06e280483ca1d28d4b98f9e089ec8d66 151 SMART SM00360 63 135 1.4E-20 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL539_RS11410 a88ad445892dafdaeb48564aecd297e7 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.674 T 29-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL539_RS11410 a88ad445892dafdaeb48564aecd297e7 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 8.8E-108 T 29-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL539_RS11410 a88ad445892dafdaeb48564aecd297e7 284 Pfam PF01040 UbiA prenyltransferase family 24 266 6.6E-71 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 Gene3D G3DSA:3.30.70.20 164 221 7.9E-13 T 29-03-2018 AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 Gene3D G3DSA:3.30.70.20 426 457 3.3E-11 T 29-03-2018 AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 Gene3D G3DSA:3.30.70.20 458 499 1.5E-6 T 29-03-2018 AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 SUPERFAMILY SSF54862 411 504 3.62E-38 T 29-03-2018 AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 SUPERFAMILY SSF54862 143 238 3.62E-38 T 29-03-2018 AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 Gene3D G3DSA:3.30.70.20 222 425 1.5E-10 T 29-03-2018 AL539_RS03555 a2c0f4fffa87b988da24eb7e2455500f 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS24580 3294e949e9801e6c77dda3b7a9099c65 92 Gene3D G3DSA:3.10.50.40 1 92 1.4E-29 T 29-03-2018 AL539_RS24580 3294e949e9801e6c77dda3b7a9099c65 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 2.1E-22 T 29-03-2018 AL539_RS24580 3294e949e9801e6c77dda3b7a9099c65 92 SUPERFAMILY SSF54534 7 90 1.44E-25 T 29-03-2018 AL539_RS13015 433615d9098fbb86b1d4cdc690a9bfe0 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.8E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL539_RS13015 433615d9098fbb86b1d4cdc690a9bfe0 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 8.2E-25 T 29-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AL539_RS13015 433615d9098fbb86b1d4cdc690a9bfe0 227 SUPERFAMILY SSF75217 4 173 1.9E-45 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS13015 433615d9098fbb86b1d4cdc690a9bfe0 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.913 T 29-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AL539_RS13015 433615d9098fbb86b1d4cdc690a9bfe0 227 Gene3D G3DSA:3.40.1280.10 1 189 1.6E-45 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS23320 b7fd7aded3614b28b03f0110c99f000c 374 Pfam PF07687 Peptidase dimerisation domain 175 274 8.6E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS23320 b7fd7aded3614b28b03f0110c99f000c 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 4.2E-24 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL539_RS23320 b7fd7aded3614b28b03f0110c99f000c 374 Gene3D G3DSA:3.40.630.10 2 374 1.1E-46 T 29-03-2018 AL539_RS23320 b7fd7aded3614b28b03f0110c99f000c 374 PIRSF PIRSF037238 1 373 9.6E-149 T 29-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AL539_RS23320 b7fd7aded3614b28b03f0110c99f000c 374 SUPERFAMILY SSF53187 2 186 1.18E-41 T 29-03-2018 AL539_RS23320 b7fd7aded3614b28b03f0110c99f000c 374 SUPERFAMILY SSF53187 298 373 1.18E-41 T 29-03-2018 AL539_RS23320 b7fd7aded3614b28b03f0110c99f000c 374 SUPERFAMILY SSF55031 177 282 3.53E-24 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS19820 ef874754a066b958b402619b753e23bd 545 SUPERFAMILY SSF51905 4 210 1.82E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 SUPERFAMILY SSF51905 307 444 1.82E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 3.6E-6 T 29-03-2018 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.6E-6 T 29-03-2018 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 SUPERFAMILY SSF54862 446 545 7.06E-28 T 29-03-2018 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 542 7.7E-49 T 29-03-2018 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 SUPERFAMILY SSF54373 211 306 9.42E-37 T 29-03-2018 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 Gene3D G3DSA:3.50.50.60 1 382 1.1E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS19820 ef874754a066b958b402619b753e23bd 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 4.6E-7 T 29-03-2018 AL539_RS08540 ce142e6963a4404c9dbad02f5e40ee01 341 SUPERFAMILY SSF161098 96 288 1.83E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS08540 ce142e6963a4404c9dbad02f5e40ee01 341 Gene3D G3DSA:1.10.3720.10 2 296 3.8E-38 T 29-03-2018 AL539_RS08540 ce142e6963a4404c9dbad02f5e40ee01 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 2.1E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 SUPERFAMILY SSF109635 8 107 9.42E-37 T 29-03-2018 AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 29-03-2018 AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.642 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL539_RS08635 4685b967c28dcb1e81fd981c03a134a4 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 6.6E-51 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL539_RS23540 9491d4b373b4a7d343feb33e35f5538d 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 134 1.4E-6 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS23540 9491d4b373b4a7d343feb33e35f5538d 156 SUPERFAMILY SSF55729 38 153 4.77E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS23540 9491d4b373b4a7d343feb33e35f5538d 156 Gene3D G3DSA:3.40.630.30 2 155 4.9E-14 T 29-03-2018 AL539_RS09895 98ca72cf901db750f4ad424b9b8e5ab3 212 Pfam PF05494 MlaC protein 33 200 8.8E-47 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL539_RS09895 98ca72cf901db750f4ad424b9b8e5ab3 212 PIRSF PIRSF004649 1 212 4.5E-58 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL539_RS09895 98ca72cf901db750f4ad424b9b8e5ab3 212 Gene3D G3DSA:3.10.450.50 27 86 1.6E-7 T 29-03-2018 AL539_RS09895 98ca72cf901db750f4ad424b9b8e5ab3 212 Gene3D G3DSA:3.10.450.50 87 173 1.2E-16 T 29-03-2018 AL539_RS18595 9605bd64904f4dada1fd315622e3121e 198 PIRSF PIRSF020606 1 198 5.4E-83 T 29-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL539_RS18595 9605bd64904f4dada1fd315622e3121e 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 6.6E-51 T 29-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL539_RS22820 a3063cb1c5abea2cbe7960cf547d30d4 79 SUPERFAMILY SSF54928 2 78 1.24E-23 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL539_RS22820 a3063cb1c5abea2cbe7960cf547d30d4 79 Gene3D G3DSA:3.30.70.330 2 78 8.8E-23 T 29-03-2018 AL539_RS22820 a3063cb1c5abea2cbe7960cf547d30d4 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 8.0E-19 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL539_RS22820 a3063cb1c5abea2cbe7960cf547d30d4 79 SMART SM00360 2 75 1.6E-21 T 29-03-2018 IPR000504 RNA recognition motif domain GO:0003676 AL539_RS23980 48864a1002f189ec2d820c6d14cb8bab 279 Pfam PF02361 Cobalt transport protein 18 236 8.6E-33 T 29-03-2018 IPR003339 ABC/ECF transporter, transmembrane component AL539_RS02940 f9d00ef380c678ec48ddda68d17a10df 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 318 3.9E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02940 f9d00ef380c678ec48ddda68d17a10df 361 Gene3D G3DSA:1.10.3720.10 74 323 3.4E-35 T 29-03-2018 AL539_RS02940 f9d00ef380c678ec48ddda68d17a10df 361 SUPERFAMILY SSF161098 136 318 4.97E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04335 b9f4d75ee00f8f54e321208cdcaf9bd7 258 Pfam PF01925 Sulfite exporter TauE/SafE 10 251 4.3E-38 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL539_RS24260 5d01b61d13e87404399f52a03d6cc132 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 29-03-2018 IPR028871 Blue (type 1) copper protein, binding site AL539_RS24260 5d01b61d13e87404399f52a03d6cc132 150 TIGRFAM TIGR02695 azurin: azurin 25 149 1.4E-61 T 29-03-2018 IPR014068 Azurin AL539_RS24260 5d01b61d13e87404399f52a03d6cc132 150 SUPERFAMILY SSF49503 23 148 2.29E-46 T 29-03-2018 IPR008972 Cupredoxin AL539_RS24260 5d01b61d13e87404399f52a03d6cc132 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 149 2.6E-25 T 29-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AL539_RS24260 5d01b61d13e87404399f52a03d6cc132 150 Gene3D G3DSA:2.60.40.420 23 150 1.6E-14 T 29-03-2018 IPR008972 Cupredoxin AL539_RS24260 5d01b61d13e87404399f52a03d6cc132 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 3.0E-64 T 29-03-2018 AL539_RS07310 ff81c900f35d672d96e34823bcfb1b8a 246 PIRSF PIRSF002884 13 246 4.1E-90 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL539_RS07310 ff81c900f35d672d96e34823bcfb1b8a 246 Gene3D G3DSA:1.10.287.500 56 189 1.2E-16 T 29-03-2018 AL539_RS07310 ff81c900f35d672d96e34823bcfb1b8a 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 4.7E-76 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL539_RS07310 ff81c900f35d672d96e34823bcfb1b8a 246 Gene3D G3DSA:1.20.5.590 31 53 0.0023 T 29-03-2018 AL539_RS07310 ff81c900f35d672d96e34823bcfb1b8a 246 SUPERFAMILY SSF75708 26 245 2.22E-65 T 29-03-2018 AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 SUPERFAMILY SSF53850 89 292 4.52E-29 T 29-03-2018 AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 Pfam PF03466 LysR substrate binding domain 88 292 9.3E-27 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 SUPERFAMILY SSF46785 2 110 1.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 Gene3D G3DSA:3.40.190.10 89 172 2.5E-9 T 29-03-2018 AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 Gene3D G3DSA:3.40.190.10 173 263 6.7E-6 T 29-03-2018 AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 Gene3D G3DSA:1.10.10.10 1 87 3.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.5E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS21895 6401210b7e07b42f5da03cda7808044f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 Pfam PF00664 ABC transporter transmembrane region 53 272 3.5E-11 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 SUPERFAMILY SSF90123 7 323 6.15E-40 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 SUPERFAMILY SSF52540 333 571 1.5E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 Gene3D G3DSA:1.20.1560.10 2 323 1.7E-28 T 29-03-2018 AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 4.5E-135 T 29-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 Pfam PF00005 ABC transporter 356 502 7.2E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 Gene3D G3DSA:3.40.50.300 324 573 1.2E-68 T 29-03-2018 AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 SMART SM00382 365 549 6.3E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS02115 ef0ea3942bba1fd002037cb1007d9669 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS01715 8b6e762bfdaef60bf5f159c47e0e4659 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 3.1E-77 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL539_RS01715 8b6e762bfdaef60bf5f159c47e0e4659 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 2.7E-112 T 29-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL539_RS01715 8b6e762bfdaef60bf5f159c47e0e4659 286 Pfam PF01226 Formate/nitrite transporter 14 275 2.0E-73 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AL539_RS01715 8b6e762bfdaef60bf5f159c47e0e4659 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site AL539_RS01715 8b6e762bfdaef60bf5f159c47e0e4659 286 Gene3D G3DSA:1.20.1080.10 10 286 6.0E-80 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL539_RS22125 f41c31c94457985e872276c6dba7ffa0 447 SUPERFAMILY SSF111283 8 445 2.62E-95 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS22125 f41c31c94457985e872276c6dba7ffa0 447 Gene3D G3DSA:3.30.2290.10 1 216 3.0E-31 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL539_RS22125 f41c31c94457985e872276c6dba7ffa0 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 8.4E-45 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS18280 32b162ee6d1edca1b1d906b78e30b947 266 PIRSF PIRSF016184 1 265 2.6E-52 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL539_RS18280 32b162ee6d1edca1b1d906b78e30b947 266 SUPERFAMILY SSF54506 2 265 4.43E-71 T 29-03-2018 AL539_RS18280 32b162ee6d1edca1b1d906b78e30b947 266 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 265 3.4E-41 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL539_RS18280 32b162ee6d1edca1b1d906b78e30b947 266 Gene3D G3DSA:3.10.310.10 1 125 3.9E-32 T 29-03-2018 AL539_RS18280 32b162ee6d1edca1b1d906b78e30b947 266 Pfam PF02567 Phenazine biosynthesis-like protein 8 261 3.4E-64 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL539_RS18280 32b162ee6d1edca1b1d906b78e30b947 266 Gene3D G3DSA:3.10.310.10 126 253 1.8E-31 T 29-03-2018 AL539_RS15350 a5df2049f6bcbf3f1ed70d9ed42e11f9 316 SMART SM00530 19 80 2.3E-4 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS15350 a5df2049f6bcbf3f1ed70d9ed42e11f9 316 Pfam PF13413 Helix-turn-helix domain 20 78 2.2E-19 T 29-03-2018 AL539_RS15350 a5df2049f6bcbf3f1ed70d9ed42e11f9 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 6.8E-26 T 29-03-2018 IPR025194 Domain of unknown function DUF4115 AL539_RS15350 a5df2049f6bcbf3f1ed70d9ed42e11f9 316 SUPERFAMILY SSF47413 14 81 9.57E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS15350 a5df2049f6bcbf3f1ed70d9ed42e11f9 316 Gene3D G3DSA:1.10.260.40 1 85 1.9E-11 T 29-03-2018 AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 SUPERFAMILY SSF81901 77 281 7.5E-27 T 29-03-2018 AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 SMART SM00671 171 206 120.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 SMART SM00671 207 242 1.2E-4 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 SMART SM00671 135 170 29.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 SMART SM00671 243 276 210.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 SMART SM00671 67 97 270.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 Gene3D G3DSA:2.60.40.1180 183 287 2.4E-12 T 29-03-2018 AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 Gene3D G3DSA:2.60.40.1180 112 182 5.9E-7 T 29-03-2018 AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 Gene3D G3DSA:2.60.40.1180 70 110 0.11 T 29-03-2018 AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 Pfam PF08238 Sel1 repeat 79 97 0.049 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 Pfam PF08238 Sel1 repeat 212 242 2.0E-5 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 Pfam PF08238 Sel1 repeat 143 169 26.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23225 8d38bb0e36f3a9df0d6e977e79e288f0 398 Pfam PF08238 Sel1 repeat 194 206 15.0 T 29-03-2018 IPR006597 Sel1-like repeat AL539_RS23095 b6b850233290be538d6ed5f8cf1b20c4 214 SMART SM00857 3 134 7.1E-9 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS23095 b6b850233290be538d6ed5f8cf1b20c4 214 Pfam PF02796 Helix-turn-helix domain of resolvase 149 190 1.0E-6 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AL539_RS23095 b6b850233290be538d6ed5f8cf1b20c4 214 Gene3D G3DSA:1.10.10.60 148 196 1.7E-7 T 29-03-2018 AL539_RS23095 b6b850233290be538d6ed5f8cf1b20c4 214 SUPERFAMILY SSF53041 1 138 2.62E-18 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS23095 b6b850233290be538d6ed5f8cf1b20c4 214 Pfam PF00239 Resolvase, N terminal domain 4 139 1.8E-15 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL539_RS23095 b6b850233290be538d6ed5f8cf1b20c4 214 Gene3D G3DSA:3.40.50.1390 1 147 3.0E-16 T 29-03-2018 AL539_RS16455 ab9dabd4ef0c0f2716fa4da5b75a89bb 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 6.0E-28 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL539_RS16455 ab9dabd4ef0c0f2716fa4da5b75a89bb 131 PIRSF PIRSF002889 1 131 1.0E-31 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL539_RS24455 847f14a0f40cc240e906356d29257b17 301 Pfam PF05661 Protein of unknown function (DUF808) 4 291 3.6E-114 T 29-03-2018 IPR008526 Inner membrane protein YedI AL539_RS24455 847f14a0f40cc240e906356d29257b17 301 PIRSF PIRSF016660 1 301 2.0E-120 T 29-03-2018 IPR008526 Inner membrane protein YedI AL539_RS16135 0d5b15242f3dc27c6657c41e569aeab4 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 29-03-2018 IPR020549 Endoribonuclease YbeY, conserved site AL539_RS16135 0d5b15242f3dc27c6657c41e569aeab4 154 Gene3D G3DSA:3.40.390.30 1 154 5.1E-53 T 29-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AL539_RS16135 0d5b15242f3dc27c6657c41e569aeab4 154 SUPERFAMILY SSF55486 3 150 6.35E-49 T 29-03-2018 AL539_RS16135 0d5b15242f3dc27c6657c41e569aeab4 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 4.3E-38 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL539_RS16135 0d5b15242f3dc27c6657c41e569aeab4 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.469 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL539_RS16135 0d5b15242f3dc27c6657c41e569aeab4 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 2.8E-37 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 3.2E-19 T 29-03-2018 AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.652 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 4.8E-23 T 29-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 Gene3D G3DSA:3.30.70.20 197 366 1.7E-11 T 29-03-2018 AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 1.5E-152 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 Gene3D G3DSA:3.30.70.20 69 196 9.3E-5 T 29-03-2018 AL539_RS10680 a4f3a1c2c36630f25b47832e6bcfbc6f 375 SUPERFAMILY SSF54862 165 315 1.46E-19 T 29-03-2018 AL539_RS12915 948da78bbd42fbb9c83c8587b60065f5 111 Gene3D G3DSA:3.30.1300.30 25 111 1.6E-23 T 29-03-2018 AL539_RS12915 948da78bbd42fbb9c83c8587b60065f5 111 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 97 8.9E-35 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AL539_RS12915 948da78bbd42fbb9c83c8587b60065f5 111 Pfam PF02501 Type II secretion system (T2SS), protein I 34 109 3.7E-20 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AL539_RS12915 948da78bbd42fbb9c83c8587b60065f5 111 SUPERFAMILY SSF54523 31 109 3.3E-22 T 29-03-2018 AL539_RS18155 1b5f814760c2980c576b6e38785e6b5b 162 Pfam PF01936 NYN domain 8 156 2.7E-37 T 29-03-2018 IPR021139 NYN domain, limkain-b1-type AL539_RS18155 1b5f814760c2980c576b6e38785e6b5b 162 Gene3D G3DSA:3.40.50.1010 1 162 1.8E-36 T 29-03-2018 IPR029060 PIN domain-like AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 SUPERFAMILY SSF58104 165 474 5.62E-67 T 29-03-2018 AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 Gene3D G3DSA:1.10.287.950 239 443 2.7E-48 T 29-03-2018 AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 Gene3D G3DSA:1.10.287.850 176 238 0.38 T 29-03-2018 AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 440 4.9E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 2.8E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 2.8E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 2.8E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS18730 64299ab740d2304410b2aacf58e8baa3 476 SMART SM00283 213 474 4.1E-51 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS21500 973adb797453b63b71194db536c04c45 172 Gene3D G3DSA:3.90.79.10 14 170 1.2E-17 T 29-03-2018 AL539_RS21500 973adb797453b63b71194db536c04c45 172 SUPERFAMILY SSF55811 9 143 6.77E-21 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS21500 973adb797453b63b71194db536c04c45 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS21500 973adb797453b63b71194db536c04c45 172 Pfam PF00293 NUDIX domain 23 145 1.4E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS06850 30cfc8ce9bbd7a6852b164f4402a1b2e 307 Gene3D G3DSA:3.40.800.20 1 302 5.4E-67 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL539_RS06850 30cfc8ce9bbd7a6852b164f4402a1b2e 307 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 4.5E-17 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL539_RS06850 30cfc8ce9bbd7a6852b164f4402a1b2e 307 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 4.5E-17 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL539_RS06850 30cfc8ce9bbd7a6852b164f4402a1b2e 307 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 4.5E-17 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL539_RS06850 30cfc8ce9bbd7a6852b164f4402a1b2e 307 Pfam PF00850 Histone deacetylase domain 41 286 6.4E-51 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL539_RS06850 30cfc8ce9bbd7a6852b164f4402a1b2e 307 SUPERFAMILY SSF52768 3 287 7.67E-81 T 29-03-2018 AL539_RS20030 7e4e8e3993a2f436f29804f0a1055650 172 SUPERFAMILY SSF141452 3 168 1.96E-38 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AL539_RS20030 7e4e8e3993a2f436f29804f0a1055650 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.2E-64 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AL539_RS20030 7e4e8e3993a2f436f29804f0a1055650 172 Gene3D G3DSA:2.30.110.20 2 172 1.1E-46 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AL539_RS20030 7e4e8e3993a2f436f29804f0a1055650 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.2E-29 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AL539_RS21350 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS21350 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS21350 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 Gene3D G3DSA:1.10.260.40 42 174 4.6E-9 T 29-03-2018 AL539_RS21350 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 SUPERFAMILY SSF46689 3 71 1.3E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS21350 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 Gene3D G3DSA:1.10.10.60 1 41 4.1E-17 T 29-03-2018 AL539_RS21350 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.5E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS21350 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_RS04250 2c2f8760a7b0034dab42cf903dec3b45 218 PIRSF PIRSF006293 2 218 2.3E-78 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL539_RS04250 2c2f8760a7b0034dab42cf903dec3b45 218 Gene3D G3DSA:3.40.50.620 3 218 1.2E-47 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS04250 2c2f8760a7b0034dab42cf903dec3b45 218 SUPERFAMILY SSF52402 5 214 1.15E-63 T 29-03-2018 AL539_RS04250 2c2f8760a7b0034dab42cf903dec3b45 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 215 46.243 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL539_RS04250 2c2f8760a7b0034dab42cf903dec3b45 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 207 5.9E-78 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL539_RS04250 2c2f8760a7b0034dab42cf903dec3b45 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 214 5.1E-81 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL539_RS22865 4967e429efa243a6a923f923486fbe09 234 Pfam PF03473 MOSC domain 49 163 3.0E-21 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL539_RS22865 4967e429efa243a6a923f923486fbe09 234 SUPERFAMILY SSF50800 3 227 6.28E-70 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AL539_RS22865 4967e429efa243a6a923f923486fbe09 234 Pfam PF03475 3-alpha domain 173 215 1.3E-9 T 29-03-2018 IPR005163 3-alpha domain AL539_RS22865 4967e429efa243a6a923f923486fbe09 234 Gene3D G3DSA:2.40.33.20 2 234 3.1E-47 T 29-03-2018 AL539_RS01805 12b362dad0dfab08213a2a42d321fe14 139 Pfam PF04024 PspC domain 14 72 3.7E-16 T 29-03-2018 IPR007168 Phage shock protein, PspC, N-terminal AL539_RS01805 12b362dad0dfab08213a2a42d321fe14 139 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 139 4.4E-48 T 29-03-2018 IPR014320 Phage shock protein, PspC AL539_RS08665 a5d930f4eb177635413b8a83e1b9c284 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 308 3.1E-133 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL539_RS08665 a5d930f4eb177635413b8a83e1b9c284 309 PIRSF PIRSF026649 4 306 5.8E-72 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS08665 a5d930f4eb177635413b8a83e1b9c284 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 299 2.5E-69 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS08665 a5d930f4eb177635413b8a83e1b9c284 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 43.336 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL539_RS24950 30f83d7a58f1e354a2883bc37354d3b0 133 Gene3D G3DSA:3.90.1590.10 1 132 7.4E-20 T 29-03-2018 AL539_RS24950 30f83d7a58f1e354a2883bc37354d3b0 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 116 2.9E-18 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL539_RS24950 30f83d7a58f1e354a2883bc37354d3b0 133 SUPERFAMILY SSF51316 3 130 5.23E-25 T 29-03-2018 IPR011057 Mss4-like AL539_RS13205 0ea72d4ae4ffe685972a912269c78498 374 Pfam PF13439 Glycosyltransferase Family 4 14 171 6.7E-19 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL539_RS13205 0ea72d4ae4ffe685972a912269c78498 374 Gene3D G3DSA:3.40.50.2000 1 179 2.4E-12 T 29-03-2018 AL539_RS13205 0ea72d4ae4ffe685972a912269c78498 374 SUPERFAMILY SSF53756 2 357 2.51E-60 T 29-03-2018 AL539_RS13205 0ea72d4ae4ffe685972a912269c78498 374 Pfam PF00534 Glycosyl transferases group 1 184 332 1.2E-31 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS13205 0ea72d4ae4ffe685972a912269c78498 374 Gene3D G3DSA:3.40.50.2000 180 348 8.1E-35 T 29-03-2018 AL539_RS25960 5b63bf633ce4a628b918ab940bd3265b 413 SUPERFAMILY SSF47384 205 282 1.29E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS25960 5b63bf633ce4a628b918ab940bd3265b 413 SMART SM00388 220 286 9.2E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS25960 5b63bf633ce4a628b918ab940bd3265b 413 SUPERFAMILY SSF55874 294 400 1.92E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS25960 5b63bf633ce4a628b918ab940bd3265b 413 Gene3D G3DSA:1.10.287.130 211 282 4.0E-8 T 29-03-2018 AL539_RS25960 5b63bf633ce4a628b918ab940bd3265b 413 Gene3D G3DSA:3.30.565.10 288 411 2.1E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS25960 5b63bf633ce4a628b918ab940bd3265b 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 282 3.3E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS18930 17c9c517c19cd0c939f1f17a54ae1548 243 Gene3D G3DSA:1.10.10.60 191 243 3.7E-11 T 29-03-2018 AL539_RS18930 17c9c517c19cd0c939f1f17a54ae1548 243 Pfam PF12833 Helix-turn-helix domain 166 239 5.8E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS18930 17c9c517c19cd0c939f1f17a54ae1548 243 SMART SM00342 162 238 6.2E-6 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS18930 17c9c517c19cd0c939f1f17a54ae1548 243 Gene3D G3DSA:1.10.10.60 134 190 3.8E-4 T 29-03-2018 AL539_RS18930 17c9c517c19cd0c939f1f17a54ae1548 243 SUPERFAMILY SSF46689 191 240 1.88E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22405 a4a6cb35a3393ea3c458d199a7894805 382 SMART SM00267 180 362 5.5E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22405 a4a6cb35a3393ea3c458d199a7894805 382 SUPERFAMILY SSF55073 196 363 8.63E-41 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS22405 a4a6cb35a3393ea3c458d199a7894805 382 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 6.1E-41 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22405 a4a6cb35a3393ea3c458d199a7894805 382 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 360 2.5E-41 T 29-03-2018 IPR000160 GGDEF domain AL539_RS22405 a4a6cb35a3393ea3c458d199a7894805 382 Gene3D G3DSA:3.30.70.270 185 376 3.5E-49 T 29-03-2018 AL539_RS09025 2370bfcea5f47b85a2d9d6494da1d534 243 Gene3D G3DSA:2.40.50.140 8 81 1.9E-26 T 29-03-2018 AL539_RS09025 2370bfcea5f47b85a2d9d6494da1d534 243 SUPERFAMILY SSF57863 91 169 5.49E-13 T 29-03-2018 AL539_RS09025 2370bfcea5f47b85a2d9d6494da1d534 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 23.441 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL539_RS09025 2370bfcea5f47b85a2d9d6494da1d534 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 8.9E-42 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL539_RS09025 2370bfcea5f47b85a2d9d6494da1d534 243 Pfam PF11967 Recombination protein O N terminal 10 81 2.9E-24 T 29-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AL539_RS09025 2370bfcea5f47b85a2d9d6494da1d534 243 Pfam PF02565 Recombination protein O C terminal 88 230 3.7E-24 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL539_RS09025 2370bfcea5f47b85a2d9d6494da1d534 243 SUPERFAMILY SSF50249 10 80 1.2E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS19100 5e92f2133d8819154fac81895f03f2c4 159 Pfam PF04073 Aminoacyl-tRNA editing domain 34 141 2.2E-19 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS19100 5e92f2133d8819154fac81895f03f2c4 159 Gene3D G3DSA:3.90.960.10 2 151 4.5E-22 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS19100 5e92f2133d8819154fac81895f03f2c4 159 SUPERFAMILY SSF55826 5 147 2.75E-30 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL539_RS04025 66362b991488fac257a7cc095e1fa296 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-49 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL539_RS04025 66362b991488fac257a7cc095e1fa296 109 SUPERFAMILY SSF69721 2 109 6.67E-41 T 29-03-2018 IPR025526 DsrC-like domain AL539_RS04025 66362b991488fac257a7cc095e1fa296 109 PIRSF PIRSF006223 2 109 7.8E-41 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL539_RS04025 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:3.30.1420.10 2 39 5.2E-16 T 29-03-2018 AL539_RS04025 66362b991488fac257a7cc095e1fa296 109 Pfam PF04358 DsrC like protein 4 109 1.3E-43 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL539_RS04025 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:1.10.10.370 40 108 1.0E-31 T 29-03-2018 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 1.8E-120 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 Gene3D G3DSA:3.40.605.10 1 258 2.2E-76 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 3.4E-229 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.478 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 Gene3D G3DSA:3.40.309.10 259 442 3.6E-42 T 29-03-2018 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 SUPERFAMILY SSF53720 2 449 1.05E-122 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS10525 8667d8f83515723562fb3a87fc0adf42 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS10090 167c60c6e3d9a28a2d0dd270953e43ff 373 PIRSF PIRSF000524 5 373 3.5E-111 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AL539_RS10090 167c60c6e3d9a28a2d0dd270953e43ff 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL539_RS10090 167c60c6e3d9a28a2d0dd270953e43ff 373 Gene3D G3DSA:3.40.640.10 22 263 1.1E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS10090 167c60c6e3d9a28a2d0dd270953e43ff 373 Pfam PF00266 Aminotransferase class-V 13 341 6.7E-39 T 29-03-2018 IPR000192 Aminotransferase class V domain AL539_RS10090 167c60c6e3d9a28a2d0dd270953e43ff 373 SUPERFAMILY SSF53383 9 371 6.12E-105 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS10090 167c60c6e3d9a28a2d0dd270953e43ff 373 Gene3D G3DSA:3.90.1150.10 264 373 1.4E-34 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS18250 9c3f9c1b13e638d3346afb7f26e621b6 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 39 273 7.5E-46 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL539_RS18250 9c3f9c1b13e638d3346afb7f26e621b6 276 SUPERFAMILY SSF53927 36 274 1.44E-65 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS18250 9c3f9c1b13e638d3346afb7f26e621b6 276 Gene3D G3DSA:3.40.140.10 147 275 1.7E-34 T 29-03-2018 AL539_RS18250 9c3f9c1b13e638d3346afb7f26e621b6 276 PIRSF PIRSF015626 20 276 2.6E-65 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL539_RS18250 9c3f9c1b13e638d3346afb7f26e621b6 276 Gene3D G3DSA:3.10.20.10 43 129 1.3E-21 T 29-03-2018 AL539_RS18250 9c3f9c1b13e638d3346afb7f26e621b6 276 Pfam PF02634 FdhD/NarQ family 42 273 3.8E-61 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL539_RS11140 f68f841681ce7ced56febdb29d97c0dc 243 Pfam PF07356 Protein of unknown function (DUF1481) 45 239 4.3E-58 T 29-03-2018 IPR010858 Protein of unknown function DUF1481 AL539_RS11140 f68f841681ce7ced56febdb29d97c0dc 243 PIRSF PIRSF028160 6 243 2.4E-119 T 29-03-2018 IPR016872 Uncharacterised conserved protein UCP028160 AL539_RS18910 726657124f18f88d8ce445c4e0011fc2 281 SUPERFAMILY SSF56281 15 221 6.35E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS18910 726657124f18f88d8ce445c4e0011fc2 281 Pfam PF00753 Metallo-beta-lactamase superfamily 55 183 6.9E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS18910 726657124f18f88d8ce445c4e0011fc2 281 SMART SM00849 54 237 5.7E-17 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS18910 726657124f18f88d8ce445c4e0011fc2 281 Gene3D G3DSA:3.60.15.10 25 232 2.4E-29 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS18910 726657124f18f88d8ce445c4e0011fc2 281 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 98 118 - T 29-03-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 AL539_RS24130 66c312c691e7788df59e7cc725f7d44b 308 Pfam PF01882 Protein of unknown function DUF58 54 138 9.3E-20 T 29-03-2018 IPR002881 Domain of unknown function DUF58 AL539_RS24130 66c312c691e7788df59e7cc725f7d44b 308 Gene3D G3DSA:3.40.50.410 66 288 6.9E-19 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS21160 d7eed4fee0dcf4abfd4a2dc7816d1921 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 14 125 3.0E-12 T 29-03-2018 IPR024464 Protein of unknown function DUF2391 AL539_RS19925 e4ea4c395d7024fde9420a42061a029a 485 Gene3D G3DSA:2.60.40.10 141 223 2.5E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS19925 e4ea4c395d7024fde9420a42061a029a 485 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 2.2E-34 T 29-03-2018 IPR025425 Domain of unknown function DUF4150 AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 Pfam PF00563 EAL domain 147 374 3.8E-64 T 29-03-2018 IPR001633 EAL domain AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 SMART SM00448 5 121 3.1E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 Gene3D G3DSA:3.40.50.2300 1 141 3.1E-21 T 29-03-2018 AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 SUPERFAMILY SSF52172 4 133 5.55E-21 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 SUPERFAMILY SSF141868 144 382 1.28E-71 T 29-03-2018 IPR001633 EAL domain AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 Gene3D G3DSA:3.20.20.450 142 388 8.4E-73 T 29-03-2018 IPR001633 EAL domain AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 SMART SM00052 137 379 1.0E-61 T 29-03-2018 IPR001633 EAL domain AL539_RS19190 6179ca0c7f4dcdd088daf37e5e1b4f3b 388 Pfam PF00072 Response regulator receiver domain 7 118 6.4E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 Pfam PF00155 Aminotransferase class I and II 27 391 8.6E-84 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 Gene3D G3DSA:3.90.1150.10 1 155 1.2E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 Gene3D G3DSA:3.90.1150.10 241 396 4.3E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 SUPERFAMILY SSF53383 1 395 1.19E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL539_RS05665 842f63fc8b39c53acd0e499bfc808549 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL539_RS25145 ca91ebc5a46ce2641272ede69ec87044 712 Gene3D G3DSA:3.40.50.300 483 712 3.4E-34 T 29-03-2018 AL539_RS25145 ca91ebc5a46ce2641272ede69ec87044 712 SUPERFAMILY SSF90123 160 464 6.67E-35 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS25145 ca91ebc5a46ce2641272ede69ec87044 712 SMART SM00382 511 696 4.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS25145 ca91ebc5a46ce2641272ede69ec87044 712 Pfam PF00005 ABC transporter 502 650 9.1E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS25145 ca91ebc5a46ce2641272ede69ec87044 712 SUPERFAMILY SSF52540 463 709 4.49E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS25145 ca91ebc5a46ce2641272ede69ec87044 712 Gene3D G3DSA:1.20.1560.10 147 469 6.1E-19 T 29-03-2018 AL539_RS25145 ca91ebc5a46ce2641272ede69ec87044 712 Pfam PF00664 ABC transporter transmembrane region 174 416 4.6E-11 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS21670 5c3afb34661e400795153dd6b1851a5e 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 3.0E-73 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL539_RS21670 5c3afb34661e400795153dd6b1851a5e 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 5.5E-77 T 29-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL539_RS22290 fcb2183f7c87c9d39649f4d137909349 496 SUPERFAMILY SSF103473 10 199 1.16E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS22290 fcb2183f7c87c9d39649f4d137909349 496 SUPERFAMILY SSF103473 469 493 1.16E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS22290 fcb2183f7c87c9d39649f4d137909349 496 SUPERFAMILY SSF103473 248 418 1.16E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS22290 fcb2183f7c87c9d39649f4d137909349 496 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 491 1.6E-109 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AL539_RS22290 fcb2183f7c87c9d39649f4d137909349 496 Gene3D G3DSA:1.20.1250.20 258 496 4.4E-21 T 29-03-2018 AL539_RS22290 fcb2183f7c87c9d39649f4d137909349 496 Gene3D G3DSA:1.20.1250.20 9 194 3.2E-31 T 29-03-2018 AL539_RS22290 fcb2183f7c87c9d39649f4d137909349 496 Pfam PF07690 Major Facilitator Superfamily 17 408 1.4E-56 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS17630 1078a1cd06f8b15106aee8d058b1cf39 158 Pfam PF05433 Glycine zipper 2TM domain 63 100 7.2E-10 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL539_RS05155 3b6e861f65b0c2a553d381c9699d722c 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 6.8E-18 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS05155 3b6e861f65b0c2a553d381c9699d722c 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 3.2E-15 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS10555 75dd4a6a110d18a1748d1269edbc7d37 197 SUPERFAMILY SSF52218 1 159 7.58E-31 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS10555 75dd4a6a110d18a1748d1269edbc7d37 197 Pfam PF03358 NADPH-dependent FMN reductase 1 142 7.9E-24 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL539_RS10555 75dd4a6a110d18a1748d1269edbc7d37 197 Gene3D G3DSA:3.40.50.360 1 188 1.5E-24 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS12965 b9476a5299e20db1d0a54bd17b15a51c 261 Pfam PF00561 alpha/beta hydrolase fold 22 247 4.4E-23 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS12965 b9476a5299e20db1d0a54bd17b15a51c 261 Gene3D G3DSA:3.40.50.1820 6 261 8.1E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS12965 b9476a5299e20db1d0a54bd17b15a51c 261 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 45.864 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL539_RS12965 b9476a5299e20db1d0a54bd17b15a51c 261 SUPERFAMILY SSF53474 9 258 1.23E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS12965 b9476a5299e20db1d0a54bd17b15a51c 261 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 258 1.7E-102 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL539_RS12695 f76785a32a59ef1fda009741608c0d6d 510 Gene3D G3DSA:1.20.5.340 192 343 9.3E-21 T 29-03-2018 AL539_RS12695 f76785a32a59ef1fda009741608c0d6d 510 Pfam PF02646 RmuC family 181 477 6.7E-107 T 29-03-2018 IPR003798 DNA recombination RmuC AL539_RS12695 f76785a32a59ef1fda009741608c0d6d 510 Gene3D G3DSA:1.10.287.1060 49 152 0.16 T 29-03-2018 AL539_RS10495 4525404bf43e27cd1b3078c459c23e08 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 6.3E-28 T 29-03-2018 IPR012659 Conserved hypothetical protein CHP02444 AL539_RS10495 4525404bf43e27cd1b3078c459c23e08 162 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.3E-34 T 29-03-2018 IPR012659 Conserved hypothetical protein CHP02444 AL539_RS23940 a05f3b0a05e29f55ed29b321ae2997b1 248 SUPERFAMILY SSF141371 26 138 5.89E-33 T 29-03-2018 AL539_RS23940 a05f3b0a05e29f55ed29b321ae2997b1 248 Gene3D G3DSA:2.30.110.10 36 137 1.7E-22 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS23940 a05f3b0a05e29f55ed29b321ae2997b1 248 Pfam PF12945 Flagellar protein YcgR 39 128 1.3E-13 T 29-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL539_RS23940 a05f3b0a05e29f55ed29b321ae2997b1 248 SUPERFAMILY SSF141371 139 247 2.62E-31 T 29-03-2018 AL539_RS23940 a05f3b0a05e29f55ed29b321ae2997b1 248 Gene3D G3DSA:2.40.10.220 138 248 1.5E-19 T 29-03-2018 AL539_RS23940 a05f3b0a05e29f55ed29b321ae2997b1 248 Pfam PF07238 PilZ domain 135 236 5.3E-14 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 SUPERFAMILY SSF52540 5 211 1.57E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Gene3D G3DSA:3.30.70.870 306 404 1.5E-33 T 29-03-2018 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Gene3D G3DSA:3.40.50.300 3 71 6.1E-11 T 29-03-2018 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 3.0E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.8E-9 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Gene3D G3DSA:2.40.50.250 487 577 6.1E-39 T 29-03-2018 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 SUPERFAMILY SSF50447 155 303 3.53E-33 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 8.2E-57 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 SUPERFAMILY SSF54980 402 516 2.06E-26 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 3.9E-294 T 29-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.2E-21 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 29-03-2018 IPR035647 EF-G domain III/V-like AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Gene3D G3DSA:2.40.30.10 190 304 5.8E-24 T 29-03-2018 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Gene3D G3DSA:3.40.50.300 72 189 2.4E-30 T 29-03-2018 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 Gene3D G3DSA:3.30.70.240 405 486 2.4E-20 T 29-03-2018 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS12835 2cabcd196296784ff95609feb2b6ed56 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL539_RS15745 a1906cb231e54e20dc696954e3ead3fe 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.423 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL539_RS15745 a1906cb231e54e20dc696954e3ead3fe 294 Pfam PF01513 ATP-NAD kinase 8 273 1.0E-70 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL539_RS15745 a1906cb231e54e20dc696954e3ead3fe 294 SUPERFAMILY SSF111331 8 290 1.05E-92 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AL539_RS15745 a1906cb231e54e20dc696954e3ead3fe 294 Gene3D G3DSA:3.40.50.10330 1 142 1.5E-37 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AL539_RS15745 a1906cb231e54e20dc696954e3ead3fe 294 Gene3D G3DSA:2.60.200.30 143 266 6.4E-38 T 29-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL539_RS18785 05674927dbfcf2f32c27084eaae8e786 382 Gene3D G3DSA:1.20.1090.10 181 382 2.4E-29 T 29-03-2018 AL539_RS18785 05674927dbfcf2f32c27084eaae8e786 382 Gene3D G3DSA:3.40.50.1970 8 179 3.1E-47 T 29-03-2018 AL539_RS18785 05674927dbfcf2f32c27084eaae8e786 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 4.4E-82 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL539_RS18785 05674927dbfcf2f32c27084eaae8e786 382 SUPERFAMILY SSF56796 2 378 5.36E-99 T 29-03-2018 AL539_RS15820 9da3b8b0c31985940936770083583b8b 102 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 1.6E-35 T 29-03-2018 IPR022069 Protein of unknown function DUF3622 AL539_RS09065 41e0214240300651742c6f06340344fd 192 Gene3D G3DSA:1.10.1740.10 1 95 8.3E-30 T 29-03-2018 AL539_RS09065 41e0214240300651742c6f06340344fd 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS09065 41e0214240300651742c6f06340344fd 192 Gene3D G3DSA:1.10.10.10 96 188 6.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09065 41e0214240300651742c6f06340344fd 192 SUPERFAMILY SSF88659 124 184 1.63E-17 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS09065 41e0214240300651742c6f06340344fd 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS09065 41e0214240300651742c6f06340344fd 192 SUPERFAMILY SSF88946 2 107 2.04E-32 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS09065 41e0214240300651742c6f06340344fd 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 9.7E-33 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS09065 41e0214240300651742c6f06340344fd 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 1.5E-103 T 29-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS09065 41e0214240300651742c6f06340344fd 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 SUPERFAMILY SSF52833 505 608 6.61E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 219 419 9.0E-18 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 Gene3D G3DSA:2.60.40.1250 35 157 1.8E-31 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 ProSitePatterns PS00194 Thioredoxin family active site. 519 537 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 Pfam PF13899 Thioredoxin-like 500 581 1.2E-13 T 29-03-2018 AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 Pfam PF11412 Disulphide bond corrector protein DsbC 41 151 2.8E-29 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 SUPERFAMILY SSF74863 39 152 1.96E-40 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 610 38.751 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AL539_RS10930 8923cfb37270b130ae12d15a30f0c38f 610 Gene3D G3DSA:3.40.30.10 501 610 2.7E-18 T 29-03-2018 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 Pfam PF13354 Beta-lactamase enzyme family 47 252 4.6E-34 T 29-03-2018 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 SUPERFAMILY SSF56601 20 280 1.15E-67 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 Gene3D G3DSA:3.40.710.10 19 280 3.2E-24 T 29-03-2018 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 1.4E-56 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 1.4E-56 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 1.4E-56 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.4E-56 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 1.4E-56 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 1.4E-56 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 1.4E-56 T 29-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL539_RS24780 3ce32ca67dfb7ef14dab1866e931240b 283 ProSitePatterns PS00146 Beta-lactamase class-A active site. 58 73 - T 29-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AL539_RS14485 817d0916f6abc15b67010c3a93ce72ee 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 6.2E-41 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL539_RS14485 817d0916f6abc15b67010c3a93ce72ee 421 PIRSF PIRSF038885 1 421 7.2E-153 T 29-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AL539_RS14485 817d0916f6abc15b67010c3a93ce72ee 421 SUPERFAMILY SSF81342 248 296 1.22E-92 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL539_RS14485 817d0916f6abc15b67010c3a93ce72ee 421 SUPERFAMILY SSF81342 6 221 1.22E-92 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL539_RS14485 817d0916f6abc15b67010c3a93ce72ee 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 5.1E-66 T 29-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL539_RS14485 817d0916f6abc15b67010c3a93ce72ee 421 Gene3D G3DSA:1.20.810.10 6 416 6.4E-160 T 29-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 AL539_RS14485 817d0916f6abc15b67010c3a93ce72ee 421 SUPERFAMILY SSF81648 297 412 1.18E-33 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL539_RS18210 1c74052b6f0d06325758d0d4ed9d7e40 441 Pfam PF07394 Protein of unknown function (DUF1501) 36 421 1.9E-61 T 29-03-2018 IPR010869 Protein of unknown function DUF1501 AL539_RS18210 1c74052b6f0d06325758d0d4ed9d7e40 441 Gene3D G3DSA:3.40.720.10 96 425 6.5E-4 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS10020 7ffaea07364b98b796b7e8afa0b2ebe2 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS10020 7ffaea07364b98b796b7e8afa0b2ebe2 489 Gene3D G3DSA:2.40.50.140 32 127 6.4E-31 T 29-03-2018 AL539_RS10020 7ffaea07364b98b796b7e8afa0b2ebe2 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.5E-104 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL539_RS10020 7ffaea07364b98b796b7e8afa0b2ebe2 489 SMART SM00316 37 122 5.8E-10 T 29-03-2018 IPR022967 RNA-binding domain, S1 AL539_RS10020 7ffaea07364b98b796b7e8afa0b2ebe2 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 7.0E-173 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL539_RS10020 7ffaea07364b98b796b7e8afa0b2ebe2 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 29-03-2018 IPR003029 S1 domain GO:0003676 AL539_RS23665 f34c392410830c6f2ad5bcb727d83d56 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 200 282 7.6E-28 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS23665 f34c392410830c6f2ad5bcb727d83d56 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 8.1E-45 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS23665 f34c392410830c6f2ad5bcb727d83d56 283 PRINTS PR00207 Flagellin signature 111 134 9.9E-22 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS23665 f34c392410830c6f2ad5bcb727d83d56 283 PRINTS PR00207 Flagellin signature 76 95 9.9E-22 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS23665 f34c392410830c6f2ad5bcb727d83d56 283 PRINTS PR00207 Flagellin signature 37 54 9.9E-22 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS23665 f34c392410830c6f2ad5bcb727d83d56 283 SUPERFAMILY SSF64518 1 283 2.88E-79 T 29-03-2018 AL539_RS23665 f34c392410830c6f2ad5bcb727d83d56 283 Gene3D G3DSA:1.20.1330.10 40 255 6.8E-63 T 29-03-2018 AL539_RS24990 a227d9f9eabb7075549184e4ba48d724 204 PRINTS PR00160 Glutaredoxin signature 171 184 1.3E-8 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS24990 a227d9f9eabb7075549184e4ba48d724 204 PRINTS PR00160 Glutaredoxin signature 157 170 1.3E-8 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS24990 a227d9f9eabb7075549184e4ba48d724 204 PRINTS PR00160 Glutaredoxin signature 108 126 1.3E-8 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS24990 a227d9f9eabb7075549184e4ba48d724 204 SUPERFAMILY SSF52833 109 189 5.34E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS24990 a227d9f9eabb7075549184e4ba48d724 204 Pfam PF00462 Glutaredoxin 109 174 4.8E-17 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL539_RS24990 a227d9f9eabb7075549184e4ba48d724 204 Gene3D G3DSA:3.40.30.10 109 185 6.8E-21 T 29-03-2018 AL539_RS24990 a227d9f9eabb7075549184e4ba48d724 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL539_RS04465 a27f59066839ad8edad7a8451d8267a8 152 Gene3D G3DSA:3.30.1460.10 1 143 5.1E-29 T 29-03-2018 AL539_RS04465 a27f59066839ad8edad7a8451d8267a8 152 Pfam PF05932 Tir chaperone protein (CesT) family 6 126 6.9E-27 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL539_RS04465 a27f59066839ad8edad7a8451d8267a8 152 SUPERFAMILY SSF69635 1 146 7.46E-37 T 29-03-2018 AL539_RS18205 8329d77407b806f3d21716bb4425fb18 364 Gene3D G3DSA:3.40.47.10 5 162 7.7E-37 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS18205 8329d77407b806f3d21716bb4425fb18 364 SUPERFAMILY SSF53901 7 325 7.48E-65 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS18205 8329d77407b806f3d21716bb4425fb18 364 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.7E-28 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS18205 8329d77407b806f3d21716bb4425fb18 364 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.5E-37 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS18205 8329d77407b806f3d21716bb4425fb18 364 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.763 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS18205 8329d77407b806f3d21716bb4425fb18 364 Gene3D G3DSA:3.40.47.10 163 324 3.0E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AL539_RS18205 8329d77407b806f3d21716bb4425fb18 364 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 7.0E-111 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL539_RS23900 81e58be636de43962fd7120317ef57a0 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 1.5E-103 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL539_RS23900 81e58be636de43962fd7120317ef57a0 563 Pfam PF02652 L-lactate permease 7 548 1.4E-107 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 SUPERFAMILY SSF52833 3 107 3.72E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PIRSF PIRSF000077 2 108 1.5E-42 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 29-03-2018 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 29-03-2018 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 29-03-2018 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Pfam PF00085 Thioredoxin 5 106 1.1E-32 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.5E-37 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL539_RS11685 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Gene3D G3DSA:3.40.30.10 2 108 8.2E-32 T 29-03-2018 AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 7 194 4.0E-70 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 8.1E-29 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 8.1E-29 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 8.1E-29 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 8.1E-29 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 166 178 8.1E-29 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 Pfam PF01514 Secretory protein of YscJ/FliF family 9 188 1.6E-23 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF AL539_RS04500 25a6f3f04303493989593dcf38c75913 248 Gene3D G3DSA:3.30.70.1530 23 90 5.6E-16 T 29-03-2018 AL539_RS25265 e9531cba97b0b514ae0f1eedb545c262 75 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 69 1.0E-22 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL539_RS25265 e9531cba97b0b514ae0f1eedb545c262 75 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 69 9.2E-29 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL539_RS18110 9d3a6d47e54e32796c079ad05242c22d 328 SUPERFAMILY SSF53850 37 253 2.17E-26 T 29-03-2018 AL539_RS18110 9d3a6d47e54e32796c079ad05242c22d 328 Gene3D G3DSA:3.40.190.10 146 324 3.2E-18 T 29-03-2018 AL539_RS18110 9d3a6d47e54e32796c079ad05242c22d 328 Gene3D G3DSA:3.40.190.10 87 145 2.2E-4 T 29-03-2018 AL539_RS18110 9d3a6d47e54e32796c079ad05242c22d 328 Pfam PF09084 NMT1/THI5 like 46 252 2.1E-17 T 29-03-2018 IPR015168 SsuA/THI5-like AL539_RS16865 66bd0d336e67909f9496a040012bc98a 198 Gene3D G3DSA:3.10.180.10 10 197 1.5E-67 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS16865 66bd0d336e67909f9496a040012bc98a 198 Pfam PF06185 YecM protein 14 196 5.9E-68 T 29-03-2018 IPR010393 Protein of unknown function DUF991 AL539_RS16865 66bd0d336e67909f9496a040012bc98a 198 SUPERFAMILY SSF54593 2 197 2.36E-67 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS10550 cf6b627b953ee9ca6702a6fe6c991bbb 290 Pfam PF00892 EamA-like transporter family 9 136 2.9E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS10550 cf6b627b953ee9ca6702a6fe6c991bbb 290 Pfam PF00892 EamA-like transporter family 147 281 5.7E-25 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS10550 cf6b627b953ee9ca6702a6fe6c991bbb 290 SUPERFAMILY SSF103481 46 139 1.96E-13 T 29-03-2018 AL539_RS10550 cf6b627b953ee9ca6702a6fe6c991bbb 290 SUPERFAMILY SSF103481 182 284 4.05E-16 T 29-03-2018 AL539_RS22380 42d2fc9edc96016c19e0b74c6a5f93d0 295 Pfam PF03466 LysR substrate binding domain 87 289 2.1E-41 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS22380 42d2fc9edc96016c19e0b74c6a5f93d0 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS22380 42d2fc9edc96016c19e0b74c6a5f93d0 295 SUPERFAMILY SSF53850 88 294 9.15E-46 T 29-03-2018 AL539_RS22380 42d2fc9edc96016c19e0b74c6a5f93d0 295 Gene3D G3DSA:1.10.10.10 3 84 1.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22380 42d2fc9edc96016c19e0b74c6a5f93d0 295 Gene3D G3DSA:3.40.190.10 176 261 4.5E-23 T 29-03-2018 AL539_RS22380 42d2fc9edc96016c19e0b74c6a5f93d0 295 Gene3D G3DSA:3.40.190.10 91 175 1.5E-17 T 29-03-2018 AL539_RS22380 42d2fc9edc96016c19e0b74c6a5f93d0 295 SUPERFAMILY SSF46785 6 110 8.36E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02210 1522174aa0a023669ec27c36ccd499b7 226 Gene3D G3DSA:3.40.1550.10 4 174 5.8E-28 T 29-03-2018 IPR028976 CheC-like domain AL539_RS02210 1522174aa0a023669ec27c36ccd499b7 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 2.6E-117 T 29-03-2018 IPR024513 Protein of unknown function DUF3334 AL539_RS02210 1522174aa0a023669ec27c36ccd499b7 226 SUPERFAMILY SSF103039 10 173 3.66E-24 T 29-03-2018 IPR028976 CheC-like domain AL539_RS15445 727ac0de92427586e847f6bdfc236143 279 Pfam PF05853 beta-keto acid cleavage enzyme 11 278 1.8E-56 T 29-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 AL539_RS15445 727ac0de92427586e847f6bdfc236143 279 Gene3D G3DSA:3.20.20.70 9 279 2.5E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS07285 9b55ea73e4cdb82018a56a00a1f823ee 164 Gene3D G3DSA:2.40.50.180 135 163 0.075 T 29-03-2018 AL539_RS07285 9b55ea73e4cdb82018a56a00a1f823ee 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS07285 9b55ea73e4cdb82018a56a00a1f823ee 164 Gene3D G3DSA:2.40.50.180 37 101 7.3E-22 T 29-03-2018 AL539_RS07285 9b55ea73e4cdb82018a56a00a1f823ee 164 SMART SM00260 16 153 2.5E-50 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS07285 9b55ea73e4cdb82018a56a00a1f823ee 164 Gene3D G3DSA:2.30.30.40 102 134 1.4E-17 T 29-03-2018 AL539_RS07285 9b55ea73e4cdb82018a56a00a1f823ee 164 SUPERFAMILY SSF50341 15 158 9.42E-42 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS13715 dcde6502931e8b641529eaf982f41b71 205 Pfam PF01583 Adenylylsulphate kinase 31 185 3.7E-70 T 29-03-2018 AL539_RS13715 dcde6502931e8b641529eaf982f41b71 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 193 4.0E-80 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL539_RS13715 dcde6502931e8b641529eaf982f41b71 205 Gene3D G3DSA:3.40.50.300 27 205 4.5E-50 T 29-03-2018 AL539_RS13715 dcde6502931e8b641529eaf982f41b71 205 SUPERFAMILY SSF52540 25 195 7.77E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13715 dcde6502931e8b641529eaf982f41b71 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.276 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.853 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 SMART SM00474 3 171 3.8E-44 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 SUPERFAMILY SSF53098 2 209 7.01E-70 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 Gene3D G3DSA:3.30.420.10 1 194 1.3E-48 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 TIGRFAM TIGR01388 rnd: ribonuclease D 5 369 5.8E-148 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 Pfam PF01612 3'-5' exonuclease 3 170 8.7E-41 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 SUPERFAMILY SSF47819 193 301 3.27E-22 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 Pfam PF00570 HRDC domain 213 279 1.9E-7 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 Gene3D G3DSA:1.10.150.80 195 293 1.2E-12 T 29-03-2018 AL539_RS16905 339f044f340263e69e424698dabb40d4 372 SUPERFAMILY SSF47819 296 371 1.31E-21 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AL539_RS07815 e86b990e9968ffcd38d539d14e207878 97 Gene3D G3DSA:1.20.5.1070 1 97 1.3E-4 T 29-03-2018 AL539_RS16930 fca55988ea4fd859751296a00d5c2d95 323 SUPERFAMILY SSF53955 11 322 1.13E-100 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS16930 fca55988ea4fd859751296a00d5c2d95 323 Gene3D G3DSA:1.10.8.350 87 192 1.2E-36 T 29-03-2018 AL539_RS16930 fca55988ea4fd859751296a00d5c2d95 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 322 2.6E-112 T 29-03-2018 IPR011970 Lytic murein transglycosylase AL539_RS16930 fca55988ea4fd859751296a00d5c2d95 323 Pfam PF13406 Transglycosylase SLT domain 24 319 6.6E-111 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 AL539_RS16930 fca55988ea4fd859751296a00d5c2d95 323 Gene3D G3DSA:1.10.530.10 198 323 4.2E-34 T 29-03-2018 AL539_RS07950 32ec87fed0c437bd95e9c30ea7a6102f 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.6E-108 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS07950 32ec87fed0c437bd95e9c30ea7a6102f 198 PIRSF PIRSF006102 1 198 3.8E-66 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS07950 32ec87fed0c437bd95e9c30ea7a6102f 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.95 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS07950 32ec87fed0c437bd95e9c30ea7a6102f 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.0E-59 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AL539_RS23010 f305e9f75a7b68ceff627f2ed1b78faf 609 Pfam PF06276 Ferric iron reductase FhuF-like transporter 430 588 1.7E-28 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain AL539_RS23010 f305e9f75a7b68ceff627f2ed1b78faf 609 Pfam PF04183 IucA / IucC family 163 383 1.2E-51 T 29-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 Gene3D G3DSA:3.40.50.300 14 373 1.8E-5 T 29-03-2018 AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 2.1E-9 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 Pfam PF13654 AAA domain 25 539 4.4E-185 T 29-03-2018 AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 SUPERFAMILY SSF54211 564 756 4.93E-35 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 Gene3D G3DSA:3.30.230.10 542 773 1.4E-27 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 SUPERFAMILY SSF52540 331 551 1.16E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 SUPERFAMILY SSF52540 30 104 1.16E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 6.9E-7 T 29-03-2018 AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 6.9E-7 T 29-03-2018 AL539_RS23925 f2a15931633e5a68ba68a13ba6aaf41d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 6.9E-7 T 29-03-2018 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 29-03-2018 IPR019775 WD40 repeat, conserved site AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 Gene3D G3DSA:2.130.10.10 23 189 6.4E-25 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 Gene3D G3DSA:2.130.10.10 239 328 1.6E-13 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 285 323 170.0 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 233 274 0.031 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 68 106 8.6 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 192 230 0.11 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 23 62 180.0 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 150 189 4.4E-5 T 29-03-2018 IPR001680 WD40 repeat GO:0005515 AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 SUPERFAMILY SSF50998 28 328 1.02E-44 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 Pfam PF13360 PQQ-like domain 170 282 9.4E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL539_RS10450 72f5261d2c5a631424b783c3a741a1c5 328 Gene3D G3DSA:1.10.10.670 190 238 1.8E-11 T 29-03-2018 AL539_RS19260 8ceb1820632bed0b5b1ec2080ab62676 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 293 5.5E-66 T 29-03-2018 IPR005218 Diacylglycerol/lipid kinase AL539_RS19260 8ceb1820632bed0b5b1ec2080ab62676 300 SUPERFAMILY SSF111331 3 296 4.36E-74 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AL539_RS19260 8ceb1820632bed0b5b1ec2080ab62676 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 9 126 3.0E-27 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL539_RS19260 8ceb1820632bed0b5b1ec2080ab62676 300 Gene3D G3DSA:3.40.50.10330 4 130 3.0E-25 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AL539_RS19260 8ceb1820632bed0b5b1ec2080ab62676 300 SMART SM00046 4 131 4.4E-13 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL539_RS19260 8ceb1820632bed0b5b1ec2080ab62676 300 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 43.794 T 29-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AL539_RS06045 96d1983b4c32a8d428f58a92a65d567d 130 PIRSF PIRSF007010 1 130 2.8E-56 T 29-03-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL539_RS06045 96d1983b4c32a8d428f58a92a65d567d 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 1.4E-49 T 29-03-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL539_RS15855 e5a7ceae8b07e08cda9e808a6667544b 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.91 T 29-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AL539_RS15855 e5a7ceae8b07e08cda9e808a6667544b 154 SUPERFAMILY SSF53271 5 146 8.95E-28 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS15855 e5a7ceae8b07e08cda9e808a6667544b 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 2.3E-13 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL539_RS15855 e5a7ceae8b07e08cda9e808a6667544b 154 Gene3D G3DSA:3.40.50.2020 1 152 2.1E-25 T 29-03-2018 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 PIRSF PIRSF001359 13 358 2.2E-93 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 SUPERFAMILY SSF51569 4 356 2.75E-131 T 29-03-2018 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 Gene3D G3DSA:3.20.20.70 4 357 2.7E-100 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 6.1E-179 T 29-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.3E-89 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL539_RS09175 220b2359fb06acee63cd8ce281947bbe 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 6.1E-110 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL539_RS18675 f693798cba216c69532d8486b9ce8ecc 160 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 5.6E-37 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 AL539_RS07965 93ffd09b817ae6a2acfcd194e9138fa0 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.497 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS07965 93ffd09b817ae6a2acfcd194e9138fa0 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 2.1E-107 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AL539_RS07965 93ffd09b817ae6a2acfcd194e9138fa0 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 4.6E-205 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS07965 93ffd09b817ae6a2acfcd194e9138fa0 414 PIRSF PIRSF016055 1 414 1.6E-199 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS21770 5628b82725a8d8562ea64fbf26787a69 518 Pfam PF06114 IrrE N-terminal-like domain 194 326 1.3E-5 T 29-03-2018 IPR010359 IrrE N-terminal-like domain AL539_RS21770 5628b82725a8d8562ea64fbf26787a69 518 Pfam PF01381 Helix-turn-helix 18 79 1.7E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS21770 5628b82725a8d8562ea64fbf26787a69 518 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 4.9E-106 T 29-03-2018 IPR022055 Protein of unknown function DUF3612 AL539_RS21770 5628b82725a8d8562ea64fbf26787a69 518 Gene3D G3DSA:1.10.260.40 14 59 1.9E-11 T 29-03-2018 AL539_RS21770 5628b82725a8d8562ea64fbf26787a69 518 SUPERFAMILY SSF47413 12 84 6.19E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS21770 5628b82725a8d8562ea64fbf26787a69 518 SMART SM00530 17 79 9.8E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS21770 5628b82725a8d8562ea64fbf26787a69 518 Gene3D G3DSA:3.30.1190.10 60 105 0.0052 T 29-03-2018 AL539_RS12865 71e2f6785f8c9661e53d74e94fed4aa3 705 Pfam PF05170 AsmA family 1 568 4.9E-134 T 29-03-2018 IPR007844 AsmA AL539_RS05860 7a8c814f183adc2e48b32beb67d2d216 300 Pfam PF13084 Domain of unknown function (DUF3943) 137 246 9.1E-38 T 29-03-2018 IPR025079 Domain of unknown function DUF3943 AL539_RS08755 a80c507a24e8515e731e379a0025d41c 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.862 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL539_RS08755 a80c507a24e8515e731e379a0025d41c 204 Pfam PF01121 Dephospho-CoA kinase 3 179 2.4E-72 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL539_RS08755 a80c507a24e8515e731e379a0025d41c 204 Gene3D G3DSA:3.40.50.300 2 204 9.4E-43 T 29-03-2018 AL539_RS08755 a80c507a24e8515e731e379a0025d41c 204 SUPERFAMILY SSF52540 1 193 1.75E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS08755 a80c507a24e8515e731e379a0025d41c 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 180 1.6E-67 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL539_RS16890 dc0b84ba410e1d23b27ff03dd4c48a54 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 173 5.4E-36 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL539_RS16890 dc0b84ba410e1d23b27ff03dd4c48a54 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 164 3.8E-44 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL539_RS16890 dc0b84ba410e1d23b27ff03dd4c48a54 185 PIRSF PIRSF004982 2 185 3.2E-60 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL539_RS25380 9c311775c48ef704295b931aed90acc6 434 Pfam PF12358 Protein of unknown function (DUF3644) 131 192 4.3E-13 T 29-03-2018 IPR022104 Protein of unknown function DUF3644 AL539_RS25380 9c311775c48ef704295b931aed90acc6 434 Gene3D G3DSA:1.20.120.330 88 276 6.3E-5 T 29-03-2018 AL539_RS25695 7c645693b7c0e69adc346d855fb70827 302 Pfam PF00682 HMGL-like 5 275 4.8E-50 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL539_RS25695 7c645693b7c0e69adc346d855fb70827 302 SUPERFAMILY SSF51569 2 296 4.03E-72 T 29-03-2018 AL539_RS25695 7c645693b7c0e69adc346d855fb70827 302 Gene3D G3DSA:3.20.20.70 1 297 2.4E-105 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS25695 7c645693b7c0e69adc346d855fb70827 302 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 231 240 - T 29-03-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 AL539_RS23200 a11b96b95d8f089e7b4bf8b8eda15e07 276 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 198 5.5E-34 T 29-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AL539_RS14305 e1a15d587e82c84dbbb6653c656b165d 147 Pfam PF09424 Yqey-like protein 5 146 3.6E-58 T 29-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial AL539_RS14305 e1a15d587e82c84dbbb6653c656b165d 147 Gene3D G3DSA:1.10.10.410 91 147 2.9E-20 T 29-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AL539_RS14305 e1a15d587e82c84dbbb6653c656b165d 147 Gene3D G3DSA:1.10.1510.10 1 90 7.4E-31 T 29-03-2018 AL539_RS14305 e1a15d587e82c84dbbb6653c656b165d 147 SUPERFAMILY SSF89095 1 146 3.4E-45 T 29-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 5.6E-21 T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 9.6E-18 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 Gene3D G3DSA:1.20.5.1030 69 120 8.2E-20 T 29-03-2018 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.517 T 29-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.9E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.9E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.9E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL539_RS11220 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.9E-41 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AL539_RS22210 5624473f04666a4496761756bcbd0614 234 Pfam PF07963 Prokaryotic N-terminal methylation motif 53 77 4.2E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS22210 5624473f04666a4496761756bcbd0614 234 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 55 77 1.9E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS22210 5624473f04666a4496761756bcbd0614 234 Gene3D G3DSA:3.30.700.10 57 228 1.7E-6 T 29-03-2018 AL539_RS22210 5624473f04666a4496761756bcbd0614 234 SUPERFAMILY SSF54523 57 113 8.63E-6 T 29-03-2018 AL539_RS14140 37fa9021a67ae6b2931873f9ee9b2be8 211 Pfam PF02734 DAK2 domain 33 205 2.0E-54 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AL539_RS14140 37fa9021a67ae6b2931873f9ee9b2be8 211 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.4E-78 T 29-03-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 AL539_RS14140 37fa9021a67ae6b2931873f9ee9b2be8 211 SUPERFAMILY SSF101473 2 207 7.72E-58 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AL539_RS14140 37fa9021a67ae6b2931873f9ee9b2be8 211 SMART SM01120 32 206 2.1E-78 T 29-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AL539_RS15720 1f7765f37ecf5ee0a361f37af9be5b90 119 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.862 T 29-03-2018 IPR005346 RnfH protein AL539_RS15720 1f7765f37ecf5ee0a361f37af9be5b90 119 Gene3D G3DSA:3.10.20.280 2 91 3.3E-34 T 29-03-2018 IPR005346 RnfH protein AL539_RS15720 1f7765f37ecf5ee0a361f37af9be5b90 119 Pfam PF03658 RnfH family Ubiquitin 8 90 7.7E-34 T 29-03-2018 IPR005346 RnfH protein AL539_RS15720 1f7765f37ecf5ee0a361f37af9be5b90 119 SUPERFAMILY SSF54285 6 82 6.21E-26 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF46565 215 278 4.34E-17 T 29-03-2018 IPR001623 DnaJ domain AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF158682 53 185 9.68E-32 T 29-03-2018 AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF158682 216 231 9.68E-32 T 29-03-2018 AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF158682 5 21 9.68E-32 T 29-03-2018 AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 SMART SM00271 217 282 4.1E-18 T 29-03-2018 IPR001623 DnaJ domain AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 Gene3D G3DSA:1.10.287.110 182 281 4.4E-17 T 29-03-2018 IPR001623 DnaJ domain AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 Gene3D G3DSA:1.10.3680.10 32 181 7.9E-31 T 29-03-2018 IPR029024 TerB-like AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 8.7E-18 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 238 253 3.3E-9 T 29-03-2018 IPR001623 DnaJ domain AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 262 282 3.3E-9 T 29-03-2018 IPR001623 DnaJ domain AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 220 238 3.3E-9 T 29-03-2018 IPR001623 DnaJ domain AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.444 T 29-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 AL539_RS13985 7158549b84d46569e9071bcead5eaff1 284 Pfam PF00226 DnaJ domain 218 278 2.9E-12 T 29-03-2018 IPR001623 DnaJ domain AL539_RS17620 b82b1066ec6e0c1d46ba667b77972cce 233 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 36.72 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AL539_RS17620 b82b1066ec6e0c1d46ba667b77972cce 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 1.3E-18 T 29-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AL539_RS17620 b82b1066ec6e0c1d46ba667b77972cce 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 2.1E-33 T 29-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AL539_RS17620 b82b1066ec6e0c1d46ba667b77972cce 233 Gene3D G3DSA:3.40.630.30 78 224 2.0E-10 T 29-03-2018 AL539_RS17620 b82b1066ec6e0c1d46ba667b77972cce 233 PIRSF PIRSF037208 1 233 3.9E-88 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AL539_RS17620 b82b1066ec6e0c1d46ba667b77972cce 233 SUPERFAMILY SSF55729 79 231 4.12E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS05690 e88af0cf42c721b8a8c4eaad52cc70d1 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.1E-172 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS05690 e88af0cf42c721b8a8c4eaad52cc70d1 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 7.3E-135 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS05690 e88af0cf42c721b8a8c4eaad52cc70d1 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AL539_RS13260 26992939956691ae533cdff12976bd37 414 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 5.7E-61 T 29-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AL539_RS13260 26992939956691ae533cdff12976bd37 414 Pfam PF00534 Glycosyl transferases group 1 247 403 5.7E-8 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS13260 26992939956691ae533cdff12976bd37 414 Gene3D G3DSA:3.40.50.2000 211 396 1.6E-12 T 29-03-2018 AL539_RS13260 26992939956691ae533cdff12976bd37 414 SUPERFAMILY SSF53756 53 362 1.0E-15 T 29-03-2018 AL539_RS09905 c9949f6cb5a7944e2cc628ca32268a3d 263 Pfam PF02405 Permease MlaE 48 259 8.6E-74 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AL539_RS09905 c9949f6cb5a7944e2cc628ca32268a3d 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 2.2E-95 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AL539_RS11840 9a0fe0749525a6961caf779475d5288d 69 Pfam PF13031 Protein of unknown function (DUF3892) 20 66 1.2E-5 T 29-03-2018 IPR024997 Protein of unknown function DUF3892 AL539_RS04310 c110395c1d21ac8f272cc9b17152d9d2 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 110 3.0E-14 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL539_RS04310 c110395c1d21ac8f272cc9b17152d9d2 138 SUPERFAMILY SSF51316 5 125 4.18E-32 T 29-03-2018 IPR011057 Mss4-like AL539_RS04310 c110395c1d21ac8f272cc9b17152d9d2 138 Gene3D G3DSA:3.90.1590.10 1 135 4.9E-25 T 29-03-2018 AL539_RS22355 361a83cb19e8c141489ab0072d8483e2 279 Pfam PF00756 Putative esterase 23 271 1.6E-60 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AL539_RS22355 361a83cb19e8c141489ab0072d8483e2 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 3.8E-122 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AL539_RS22355 361a83cb19e8c141489ab0072d8483e2 279 SUPERFAMILY SSF53474 3 277 3.08E-91 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS22355 361a83cb19e8c141489ab0072d8483e2 279 Gene3D G3DSA:3.40.50.1820 1 277 6.0E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23895 8e7c50d07d862ccff80a731b122790dc 379 Gene3D G3DSA:3.20.20.70 2 378 5.4E-96 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS23895 8e7c50d07d862ccff80a731b122790dc 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.5E-126 T 29-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AL539_RS23895 8e7c50d07d862ccff80a731b122790dc 379 SUPERFAMILY SSF51395 223 375 2.87E-98 T 29-03-2018 AL539_RS23895 8e7c50d07d862ccff80a731b122790dc 379 SUPERFAMILY SSF51395 7 193 2.87E-98 T 29-03-2018 AL539_RS23895 8e7c50d07d862ccff80a731b122790dc 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 29-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AL539_RS23895 8e7c50d07d862ccff80a731b122790dc 379 PIRSF PIRSF000138 2 379 3.9E-122 T 29-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AL539_RS02155 72615579d8031632eecfe445f341ae8a 244 Pfam PF02698 DUF218 domain 61 200 2.3E-21 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AL539_RS02155 72615579d8031632eecfe445f341ae8a 244 Gene3D G3DSA:3.40.50.620 50 186 6.4E-21 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS16965 860c701bde6631beb3cd7df608f06813 154 Gene3D G3DSA:3.10.129.10 2 141 7.7E-24 T 29-03-2018 AL539_RS16965 860c701bde6631beb3cd7df608f06813 154 PIRSF PIRSF020565 1 154 2.8E-66 T 29-03-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted AL539_RS16965 860c701bde6631beb3cd7df608f06813 154 SUPERFAMILY SSF54637 4 143 9.1E-29 T 29-03-2018 IPR029069 HotDog domain AL539_RS20735 ebe7e500c099b4c5657c7b1a16b0167e 282 Pfam PF01734 Patatin-like phospholipase 9 175 6.9E-20 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL539_RS20735 ebe7e500c099b4c5657c7b1a16b0167e 282 SUPERFAMILY SSF52151 6 223 1.15E-33 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AL539_RS20735 ebe7e500c099b4c5657c7b1a16b0167e 282 Gene3D G3DSA:3.40.1090.10 2 210 3.2E-26 T 29-03-2018 AL539_RS19420 83e889f2d184390b1f6bbf5cba08fe0b 311 Pfam PF01032 FecCD transport family 8 306 4.1E-66 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS19420 83e889f2d184390b1f6bbf5cba08fe0b 311 Gene3D G3DSA:1.10.3470.10 2 309 3.0E-44 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS19420 83e889f2d184390b1f6bbf5cba08fe0b 311 SUPERFAMILY SSF81345 4 306 5.36E-65 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS12005 fe68bf50bfedf8372ef32fb19a345e42 364 Gene3D G3DSA:3.10.350.10 33 87 1.3E-14 T 29-03-2018 AL539_RS12005 fe68bf50bfedf8372ef32fb19a345e42 364 SMART SM00257 39 87 2.0E-4 T 29-03-2018 IPR018392 LysM domain AL539_RS12005 fe68bf50bfedf8372ef32fb19a345e42 364 Pfam PF01476 LysM domain 40 85 1.2E-12 T 29-03-2018 IPR018392 LysM domain AL539_RS12005 fe68bf50bfedf8372ef32fb19a345e42 364 SUPERFAMILY SSF54106 38 86 8.24E-7 T 29-03-2018 IPR018392 LysM domain AL539_RS23720 ea37525bcdb16ab5524ff356904981c5 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 12 117 4.4E-14 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS23720 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 4.0E-10 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS23720 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 4.0E-10 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS23720 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 4.0E-10 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS23720 ea37525bcdb16ab5524ff356904981c5 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 15.269 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS23720 ea37525bcdb16ab5524ff356904981c5 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 8.8E-24 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL539_RS09435 51ab97baea1c9f49ed745e4a52f87af4 646 SUPERFAMILY SSF56349 307 379 5.59E-11 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS09435 51ab97baea1c9f49ed745e4a52f87af4 646 SUPERFAMILY SSF56349 414 505 5.59E-11 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS09435 51ab97baea1c9f49ed745e4a52f87af4 646 Gene3D G3DSA:1.10.443.10 219 516 1.0E-18 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS09435 51ab97baea1c9f49ed745e4a52f87af4 646 Pfam PF00589 Phage integrase family 307 497 3.2E-8 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS09580 51ab97baea1c9f49ed745e4a52f87af4 646 SUPERFAMILY SSF56349 307 379 5.59E-11 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS09580 51ab97baea1c9f49ed745e4a52f87af4 646 SUPERFAMILY SSF56349 414 505 5.59E-11 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS09580 51ab97baea1c9f49ed745e4a52f87af4 646 Gene3D G3DSA:1.10.443.10 219 516 1.0E-18 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS09580 51ab97baea1c9f49ed745e4a52f87af4 646 Pfam PF00589 Phage integrase family 307 497 3.2E-8 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS12285 36ea177aa44c2f00620d40ac93d47471 138 SUPERFAMILY SSF54534 46 121 1.57E-10 T 29-03-2018 AL539_RS12285 36ea177aa44c2f00620d40ac93d47471 138 Gene3D G3DSA:3.10.50.30 43 122 9.6E-12 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS12285 36ea177aa44c2f00620d40ac93d47471 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 48 119 5.7E-9 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS12285 36ea177aa44c2f00620d40ac93d47471 138 PIRSF PIRSF006092 29 123 3.1E-8 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 2.0E-41 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 Gene3D G3DSA:3.40.50.300 3 213 2.3E-55 T 29-03-2018 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 29-03-2018 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 29-03-2018 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 29-03-2018 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 29-03-2018 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 29-03-2018 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 29-03-2018 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 SUPERFAMILY SSF52540 6 204 2.48E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.6E-89 T 29-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AL539_RS06500 d543be713a0433c163a5f52017a694aa 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.387 T 29-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AL539_RS12230 82cc8df11d898e03befb15d028481b8d 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.542 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL539_RS12230 82cc8df11d898e03befb15d028481b8d 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 1.0E-45 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL539_RS12230 82cc8df11d898e03befb15d028481b8d 118 Pfam PF00825 Ribonuclease P 6 112 4.7E-33 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL539_RS12230 82cc8df11d898e03befb15d028481b8d 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 1.4E-28 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL539_RS12230 82cc8df11d898e03befb15d028481b8d 118 Gene3D G3DSA:3.30.230.10 1 118 5.7E-33 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_RS12230 82cc8df11d898e03befb15d028481b8d 118 SUPERFAMILY SSF54211 4 114 9.1E-31 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_RS12230 82cc8df11d898e03befb15d028481b8d 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 29-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 4.2E-155 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 Gene3D G3DSA:3.65.10.10 228 426 9.7E-70 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 SUPERFAMILY SSF55205 1 424 1.96E-143 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 Gene3D G3DSA:3.65.10.10 21 227 3.1E-62 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.383 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 4.7E-141 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL539_RS17635 df7741f13c48f0d05fa9d2a5d33ab770 426 PIRSF PIRSF000505 1 426 3.5E-155 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL539_RS17070 095ed6c7c48b5b4a99f204047999a187 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 2.8E-123 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL539_RS17070 095ed6c7c48b5b4a99f204047999a187 455 Pfam PF02386 Cation transport protein 52 438 2.0E-53 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 Pfam PF12431 Transcriptional regulator 134 162 1.8E-6 T 29-03-2018 IPR028141 Transcriptional regulator AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 SUPERFAMILY SSF52172 6 139 4.41E-31 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 Pfam PF00072 Response regulator receiver domain 7 118 2.6E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 Pfam PF08279 HTH domain 166 208 7.5E-5 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 PIRSF PIRSF006171 3 228 1.2E-79 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 Gene3D G3DSA:1.10.10.10 163 216 2.4E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 Gene3D G3DSA:3.40.50.2300 4 151 2.1E-28 T 29-03-2018 AL539_RS04615 a584fbbf599d58baae0e8d74b4ff56bf 228 SMART SM00448 5 118 7.3E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS23085 d5b2f1606049260679f0bb5e02e5ff7a 214 Pfam PF01852 START domain 23 190 3.2E-6 T 29-03-2018 IPR002913 START domain GO:0008289 AL539_RS23085 d5b2f1606049260679f0bb5e02e5ff7a 214 SUPERFAMILY SSF55961 20 204 2.14E-43 T 29-03-2018 AL539_RS23085 d5b2f1606049260679f0bb5e02e5ff7a 214 Gene3D G3DSA:3.30.530.20 3 212 1.2E-36 T 29-03-2018 IPR023393 START-like domain AL539_RS23085 d5b2f1606049260679f0bb5e02e5ff7a 214 PIRSF PIRSF039033 2 214 1.5E-55 T 29-03-2018 IPR028347 START domain-containing protein AL539_RS22330 5d38badc85ee26a4013112ac832ea681 194 Pfam PF01810 LysE type translocator 17 188 2.4E-15 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS21155 af96596efcbfdf39b056eaefb247d13d 296 SMART SM00028 235 268 0.0019 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS21155 af96596efcbfdf39b056eaefb247d13d 296 SMART SM00028 201 234 13.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS21155 af96596efcbfdf39b056eaefb247d13d 296 Pfam PF13181 Tetratricopeptide repeat 236 267 7.3E-5 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS21155 af96596efcbfdf39b056eaefb247d13d 296 Gene3D G3DSA:1.20.58.280 241 284 8.4E-5 T 29-03-2018 AL539_RS21155 af96596efcbfdf39b056eaefb247d13d 296 Gene3D G3DSA:1.25.40.10 120 240 5.0E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS21155 af96596efcbfdf39b056eaefb247d13d 296 SUPERFAMILY SSF48452 187 274 1.6E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22605 1661da24999468b8cb3c8f2b97ef4c52 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS22605 1661da24999468b8cb3c8f2b97ef4c52 232 Pfam PF00005 ABC transporter 21 169 7.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS22605 1661da24999468b8cb3c8f2b97ef4c52 232 SUPERFAMILY SSF52540 1 223 1.73E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22605 1661da24999468b8cb3c8f2b97ef4c52 232 SMART SM00382 30 219 1.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS22605 1661da24999468b8cb3c8f2b97ef4c52 232 Gene3D G3DSA:3.40.50.300 1 229 5.9E-63 T 29-03-2018 AL539_RS03015 e0383c04380d205fdaf76c13167c02c7 505 Gene3D G3DSA:3.40.720.10 250 387 1.6E-32 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS03015 e0383c04380d205fdaf76c13167c02c7 505 Gene3D G3DSA:3.40.720.10 22 249 2.6E-51 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS03015 e0383c04380d205fdaf76c13167c02c7 505 Gene3D G3DSA:3.30.1120.10 388 481 1.2E-11 T 29-03-2018 AL539_RS03015 e0383c04380d205fdaf76c13167c02c7 505 Pfam PF00884 Sulfatase 26 351 1.1E-61 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS03015 e0383c04380d205fdaf76c13167c02c7 505 SUPERFAMILY SSF53649 22 452 3.49E-118 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS15490 fa9119fa60944ea65e6d53a3e0caad58 349 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 201 346 1.2E-20 T 29-03-2018 IPR019238 Transcriptional regulator, AbiEi 2 antitoxin, Type IV TA system AL539_RS09150 794afc1cceebdb29b398902ac6a0b896 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 1.5E-40 T 29-03-2018 IPR007497 Protein of unknown function DUF541 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 3.9E-43 T 29-03-2018 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PIRSF PIRSF019574 1 345 4.9E-125 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 Gene3D G3DSA:3.40.190.10 17 141 4.6E-23 T 29-03-2018 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 1.6E-84 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 Gene3D G3DSA:3.40.190.10 142 297 1.0E-37 T 29-03-2018 AL539_RS03720 0f8166aebb2501c785f5cbd51c2f6643 345 SUPERFAMILY SSF53850 24 342 1.58E-92 T 29-03-2018 AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 Gene3D G3DSA:1.20.1640.10 362 604 1.1E-27 T 29-03-2018 AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 1.6E-131 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 SUPERFAMILY SSF82866 407 604 7.46E-41 T 29-03-2018 AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 Pfam PF02355 Protein export membrane protein 430 598 5.0E-18 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 Pfam PF13721 SecD export protein N-terminal TM region 14 110 2.3E-22 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 3.5E-73 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_RS20420 d329044798ae3e8c98d166586a15e860 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 43.297 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL539_RS09425 7912b958f20ca0b4656eea12496f8b95 419 PIRSF PIRSF014677 9 418 1.5E-47 T 29-03-2018 IPR011202 Uncharacterised conserved protein UCP014677 AL539_RS09425 7912b958f20ca0b4656eea12496f8b95 419 Pfam PF13289 SIR2-like domain 62 182 2.4E-18 T 29-03-2018 AL539_RS09570 7912b958f20ca0b4656eea12496f8b95 419 PIRSF PIRSF014677 9 418 1.5E-47 T 29-03-2018 IPR011202 Uncharacterised conserved protein UCP014677 AL539_RS09570 7912b958f20ca0b4656eea12496f8b95 419 Pfam PF13289 SIR2-like domain 62 182 2.4E-18 T 29-03-2018 AL539_RS00320 003e842e17b97b4e9026d54f7fb86ac7 411 SUPERFAMILY SSF116734 201 404 3.11E-48 T 29-03-2018 AL539_RS00320 003e842e17b97b4e9026d54f7fb86ac7 411 SUPERFAMILY SSF116734 2 193 3.27E-48 T 29-03-2018 AL539_RS00320 003e842e17b97b4e9026d54f7fb86ac7 411 Gene3D G3DSA:3.90.220.20 169 383 5.9E-43 T 29-03-2018 AL539_RS00320 003e842e17b97b4e9026d54f7fb86ac7 411 Gene3D G3DSA:3.90.220.20 1 168 9.7E-33 T 29-03-2018 AL539_RS00320 003e842e17b97b4e9026d54f7fb86ac7 411 Pfam PF01420 Type I restriction modification DNA specificity domain 4 173 1.2E-24 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS00320 003e842e17b97b4e9026d54f7fb86ac7 411 Pfam PF01420 Type I restriction modification DNA specificity domain 205 382 1.4E-17 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 Gene3D G3DSA:2.40.110.10 237 359 4.6E-16 T 29-03-2018 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 SUPERFAMILY SSF47203 361 508 6.93E-23 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 SUPERFAMILY SSF56645 121 356 8.77E-43 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 Gene3D G3DSA:1.10.540.10 77 236 3.4E-30 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 Gene3D G3DSA:1.20.140.10 361 509 8.4E-20 T 29-03-2018 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 7.6E-115 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 234 6.9E-16 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL539_RS07605 1562477016aa3544bd0a0f03d1325b52 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.4E-13 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL539_RS06155 efb9245f840444cae864be06ebd3c0a4 305 SUPERFAMILY SSF56959 87 283 4.09E-19 T 29-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 AL539_RS06155 efb9245f840444cae864be06ebd3c0a4 305 Pfam PF07968 Leukocidin/Hemolysin toxin family 105 300 1.7E-14 T 29-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 AL539_RS06155 efb9245f840444cae864be06ebd3c0a4 305 Gene3D G3DSA:2.70.240.10 38 302 1.6E-45 T 29-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.445 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 1.5E-26 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 SUPERFAMILY SSF53335 258 371 1.33E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 SUPERFAMILY SSF53335 139 217 1.33E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 Pfam PF02926 THUMP domain 30 153 1.6E-12 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 Gene3D G3DSA:3.40.50.150 496 706 2.0E-39 T 29-03-2018 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.8E-61 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 Gene3D G3DSA:3.30.750.80 396 495 5.6E-7 T 29-03-2018 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 SUPERFAMILY SSF53335 399 705 2.2E-68 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 PIRSF PIRSF037618 1 706 2.4E-295 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 314 7.8E-5 T 29-03-2018 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 7.8E-5 T 29-03-2018 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 Gene3D G3DSA:3.40.50.150 93 360 8.5E-33 T 29-03-2018 AL539_RS03890 fcc878e9fcae47611aeba4159906b2f1 706 SMART SM00981 56 154 7.1E-19 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AL539_RS16725 d7eae29075d56868209699907257f6bf 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.7E-24 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 AL539_RS16725 d7eae29075d56868209699907257f6bf 167 Gene3D G3DSA:3.10.129.10 3 154 3.4E-18 T 29-03-2018 AL539_RS16725 d7eae29075d56868209699907257f6bf 167 SUPERFAMILY SSF54637 10 156 1.16E-22 T 29-03-2018 IPR029069 HotDog domain AL539_RS05125 f8afafa16fce6b42117685111471c033 132 SMART SM00860 9 122 2.1E-4 T 29-03-2018 IPR018958 Knr4/Smi1-like domain AL539_RS05125 f8afafa16fce6b42117685111471c033 132 SUPERFAMILY SSF160631 8 123 3.79E-5 T 29-03-2018 AL539_RS05125 f8afafa16fce6b42117685111471c033 132 Gene3D G3DSA:3.40.1580.10 7 131 1.5E-12 T 29-03-2018 AL539_RS16415 88056b7f61d84f6775cbad572b112d7c 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 6.1E-42 T 29-03-2018 IPR032386 Flagellar assembly protein T, middle domain AL539_RS16415 88056b7f61d84f6775cbad572b112d7c 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 7.4E-28 T 29-03-2018 IPR032388 Flagellar assembly protein T, C-terminal AL539_RS16415 88056b7f61d84f6775cbad572b112d7c 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 3.4E-26 T 29-03-2018 IPR032370 Flagellar assembly protein T, N-terminal AL539_RS16415 88056b7f61d84f6775cbad572b112d7c 377 Gene3D G3DSA:3.40.50.10070 115 269 8.7E-6 T 29-03-2018 AL539_RS22055 a62cabb1a664898c7cbe5c2e669a5529 160 SUPERFAMILY SSF141523 24 158 6.93E-24 T 29-03-2018 AL539_RS22055 a62cabb1a664898c7cbe5c2e669a5529 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 7.1E-19 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL539_RS22055 a62cabb1a664898c7cbe5c2e669a5529 160 Gene3D G3DSA:2.40.440.10 23 159 2.4E-21 T 29-03-2018 AL539_RS00695 b8ca69a7ec16ce6cc946880ec0ec18ae 440 SUPERFAMILY SSF56349 101 137 8.24E-23 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS00695 b8ca69a7ec16ce6cc946880ec0ec18ae 440 SUPERFAMILY SSF56349 180 295 8.24E-23 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS00695 b8ca69a7ec16ce6cc946880ec0ec18ae 440 SUPERFAMILY SSF56349 324 415 8.24E-23 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS00695 b8ca69a7ec16ce6cc946880ec0ec18ae 440 Pfam PF00589 Phage integrase family 196 413 8.0E-13 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00695 b8ca69a7ec16ce6cc946880ec0ec18ae 440 Gene3D G3DSA:1.10.443.10 193 421 2.7E-25 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00695 b8ca69a7ec16ce6cc946880ec0ec18ae 440 Gene3D G3DSA:1.10.150.130 60 144 0.0051 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS07190 b8ca69a7ec16ce6cc946880ec0ec18ae 440 SUPERFAMILY SSF56349 101 137 8.24E-23 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS07190 b8ca69a7ec16ce6cc946880ec0ec18ae 440 SUPERFAMILY SSF56349 180 295 8.24E-23 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS07190 b8ca69a7ec16ce6cc946880ec0ec18ae 440 SUPERFAMILY SSF56349 324 415 8.24E-23 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS07190 b8ca69a7ec16ce6cc946880ec0ec18ae 440 Pfam PF00589 Phage integrase family 196 413 8.0E-13 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS07190 b8ca69a7ec16ce6cc946880ec0ec18ae 440 Gene3D G3DSA:1.10.443.10 193 421 2.7E-25 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS07190 b8ca69a7ec16ce6cc946880ec0ec18ae 440 Gene3D G3DSA:1.10.150.130 60 144 0.0051 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS19460 1b1b6d73a4cfbb5130eaacb55b485063 292 Pfam PF13407 Periplasmic binding protein domain 28 278 2.2E-60 T 29-03-2018 IPR025997 Periplasmic binding protein AL539_RS19460 1b1b6d73a4cfbb5130eaacb55b485063 292 Gene3D G3DSA:3.40.50.2300 18 138 8.3E-28 T 29-03-2018 AL539_RS19460 1b1b6d73a4cfbb5130eaacb55b485063 292 SUPERFAMILY SSF53822 6 292 1.21E-87 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS19460 1b1b6d73a4cfbb5130eaacb55b485063 292 Gene3D G3DSA:3.40.50.2300 139 289 8.2E-41 T 29-03-2018 AL539_RS08070 a4b9c61ef1d40baef543f7de2cf867cf 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 142 1.7E-30 T 29-03-2018 IPR021271 Protein of unknown function DUF2850 AL539_RS10890 1c9e09feb4b5a684163a4aea6e55b81f 170 PIRSF PIRSF034445 1 159 7.0E-23 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL539_RS10890 1c9e09feb4b5a684163a4aea6e55b81f 170 Pfam PF07813 LTXXQ motif family protein 39 149 1.8E-22 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL539_RS02690 a9e60e6a3f9e4340c0a3528e66b97d26 77 Gene3D G3DSA:2.20.70.10 7 24 0.17 T 29-03-2018 AL539_RS07400 58de6129f108461bad4f6b08979063b7 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.2E-5 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL539_RS07400 58de6129f108461bad4f6b08979063b7 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 2.2E-5 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL539_RS07400 58de6129f108461bad4f6b08979063b7 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 2.2E-5 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL539_RS07400 58de6129f108461bad4f6b08979063b7 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 6.8E-36 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL539_RS10670 1181a8fc522915435214fa2e1604de3d 154 SUPERFAMILY SSF52540 27 151 7.14E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10670 1181a8fc522915435214fa2e1604de3d 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 4.1E-43 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL539_RS10670 1181a8fc522915435214fa2e1604de3d 154 Gene3D G3DSA:3.40.50.300 1 153 4.5E-53 T 29-03-2018 AL539_RS10670 1181a8fc522915435214fa2e1604de3d 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 4.2E-53 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL539_RS10805 ccc245a6f3cc53fbae4f717d6840f9d4 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS10805 ccc245a6f3cc53fbae4f717d6840f9d4 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 8.8E-44 T 29-03-2018 IPR025722 Bacterial transcriptional repressor TetR AL539_RS10805 ccc245a6f3cc53fbae4f717d6840f9d4 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS10805 ccc245a6f3cc53fbae4f717d6840f9d4 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS10805 ccc245a6f3cc53fbae4f717d6840f9d4 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS10805 ccc245a6f3cc53fbae4f717d6840f9d4 211 Gene3D G3DSA:1.10.357.10 2 210 2.1E-28 T 29-03-2018 AL539_RS21340 4c70d1ea56e9445aca71b495e034f8f6 470 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 443 7.2E-220 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AL539_RS21340 4c70d1ea56e9445aca71b495e034f8f6 470 Gene3D G3DSA:2.30.170.30 3 55 2.7E-22 T 29-03-2018 AL539_RS21340 4c70d1ea56e9445aca71b495e034f8f6 470 PIRSF PIRSF018788 3 460 6.5E-234 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AL539_RS21340 4c70d1ea56e9445aca71b495e034f8f6 470 Gene3D G3DSA:1.10.220.70 58 142 5.4E-41 T 29-03-2018 AL539_RS21340 4c70d1ea56e9445aca71b495e034f8f6 470 Gene3D G3DSA:3.20.20.70 145 451 1.1E-159 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS17585 315509ec7753d3919ac09e30ed3c28ff 225 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 224 23.355 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL539_RS17585 315509ec7753d3919ac09e30ed3c28ff 225 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 221 9.6E-43 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.326 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 SUPERFAMILY SSF52096 25 282 1.06E-83 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 Gene3D G3DSA:3.90.226.10 13 287 7.4E-66 T 29-03-2018 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 Pfam PF01039 Carboxyl transferase domain 99 239 5.4E-14 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AL539_RS07050 2230638572ba59c9a2724ff994e079cd 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.1E-139 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AL539_RS21455 02cb824420d89ced8b552c94d392645e 243 SUPERFAMILY SSF117143 77 176 1.22E-12 T 29-03-2018 AL539_RS21455 02cb824420d89ced8b552c94d392645e 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 1.3E-16 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS21455 02cb824420d89ced8b552c94d392645e 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 220 2.6E-54 T 29-03-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AL539_RS21455 02cb824420d89ced8b552c94d392645e 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.3E-31 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_RS21455 02cb824420d89ced8b552c94d392645e 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS00065 eee8e09c9f16c4062a04ef9c4d427bb5 182 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 94 154 8.7E-17 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AL539_RS00065 eee8e09c9f16c4062a04ef9c4d427bb5 182 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 47 84 4.0E-5 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AL539_RS00065 eee8e09c9f16c4062a04ef9c4d427bb5 182 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 32 154 2.0E-14 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 Pfam PF02163 Peptidase family M50 11 440 2.4E-87 T 29-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 SUPERFAMILY SSF50156 89 183 2.76E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 Gene3D G3DSA:2.30.42.10 28 197 7.3E-10 T 29-03-2018 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 SMART SM00228 115 186 1.4 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 SMART SM00228 212 281 2.3E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 SUPERFAMILY SSF50156 196 293 3.29E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 9.5E-137 T 29-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 Pfam PF13180 PDZ domain 226 288 3.9E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AL539_RS07730 d48af4e55919d34212d08bcc68fb6d00 452 Gene3D G3DSA:2.30.42.10 198 302 6.9E-19 T 29-03-2018 AL539_RS15330 a6fd3274ee7062a602bad942a0cd7f4d 64 PIRSF PIRSF039003 1 64 1.3E-34 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL539_RS15330 a6fd3274ee7062a602bad942a0cd7f4d 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.8E-35 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL539_RS15330 a6fd3274ee7062a602bad942a0cd7f4d 64 SUPERFAMILY SSF140319 1 62 2.09E-28 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL539_RS15330 a6fd3274ee7062a602bad942a0cd7f4d 64 Gene3D G3DSA:1.10.10.600 1 62 1.9E-34 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL539_RS15330 a6fd3274ee7062a602bad942a0cd7f4d 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 1.7E-34 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 Pfam PF00202 Aminotransferase class-III 33 396 5.8E-76 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 Gene3D G3DSA:3.90.1150.10 1 181 2.3E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 SUPERFAMILY SSF53383 2 423 3.42E-135 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 Gene3D G3DSA:3.90.1150.10 310 431 1.9E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 Gene3D G3DSA:3.40.640.10 182 309 6.3E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.5E-194 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL539_RS08510 b4aa0ab2cac10bc9d76dae9418723f76 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.708 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL539_RS18190 e4355daf1603732d84665eff39330f1d 129 Pfam PF11756 Nitrous oxide-stimulated promoter 8 110 1.8E-46 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA AL539_RS18190 e4355daf1603732d84665eff39330f1d 129 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 7.0E-48 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA AL539_RS20715 83c715ff5096b74e56a447e9573ebb22 551 Pfam PF00884 Sulfatase 242 532 1.8E-42 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS20715 83c715ff5096b74e56a447e9573ebb22 551 Pfam PF08019 Domain of unknown function (DUF1705) 59 211 1.3E-48 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AL539_RS20715 83c715ff5096b74e56a447e9573ebb22 551 Gene3D G3DSA:3.40.720.10 198 543 6.5E-21 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS20715 83c715ff5096b74e56a447e9573ebb22 551 SUPERFAMILY SSF53649 349 534 1.36E-17 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS04750 58d32351d4679dc3a4ebd96c429cf701 213 Gene3D G3DSA:3.30.980.10 84 212 5.9E-20 T 29-03-2018 AL539_RS04750 58d32351d4679dc3a4ebd96c429cf701 213 Pfam PF01411 tRNA synthetases class II (A) 12 87 3.0E-8 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AL539_RS04750 58d32351d4679dc3a4ebd96c429cf701 213 SUPERFAMILY SSF55186 84 210 5.49E-26 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL539_RS04750 58d32351d4679dc3a4ebd96c429cf701 213 SMART SM00863 166 208 3.2E-6 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL539_RS04750 58d32351d4679dc3a4ebd96c429cf701 213 SUPERFAMILY SSF50447 1 82 2.22E-14 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AL539_RS04750 58d32351d4679dc3a4ebd96c429cf701 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 8.5E-6 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AL539_RS17160 03e8d6734ff20b07b89eb7bd17beabc8 202 Gene3D G3DSA:1.20.1540.10 16 194 3.3E-21 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL539_RS17160 03e8d6734ff20b07b89eb7bd17beabc8 202 Pfam PF01694 Rhomboid family 53 192 1.2E-13 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL539_RS17160 03e8d6734ff20b07b89eb7bd17beabc8 202 SUPERFAMILY SSF144091 22 195 4.58E-29 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL539_RS17160 03e8d6734ff20b07b89eb7bd17beabc8 202 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 43 191 6.1E-48 T 29-03-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AL539_RS21900 09c23610b5b020366e7dbb46668ce33f 114 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 7 92 4.0E-10 T 29-03-2018 IPR035242 Protein of unknown function DUF5329 AL539_RS21900 09c23610b5b020366e7dbb46668ce33f 114 Pfam PF17263 Family of unknown function (DUF5329) 22 109 9.6E-32 T 29-03-2018 IPR035242 Protein of unknown function DUF5329 AL539_RS13675 aa171dc14e16b15d9a909b2e1bd1a015 153 SUPERFAMILY SSF55729 1 149 6.91E-36 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS13675 aa171dc14e16b15d9a909b2e1bd1a015 153 Pfam PF13673 Acetyltransferase (GNAT) domain 47 149 2.5E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS13675 aa171dc14e16b15d9a909b2e1bd1a015 153 Gene3D G3DSA:3.40.630.30 1 153 1.3E-29 T 29-03-2018 AL539_RS12555 83c038443dd6f3e3f6ac485cb8febaf7 285 Gene3D G3DSA:3.40.50.1580 6 284 5.3E-62 T 29-03-2018 AL539_RS12555 83c038443dd6f3e3f6ac485cb8febaf7 285 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 35 281 2.4E-99 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AL539_RS12555 83c038443dd6f3e3f6ac485cb8febaf7 285 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 87 128 - T 29-03-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AL539_RS12555 83c038443dd6f3e3f6ac485cb8febaf7 285 Pfam PF01048 Phosphorylase superfamily 35 281 1.8E-43 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS12555 83c038443dd6f3e3f6ac485cb8febaf7 285 SUPERFAMILY SSF53167 22 283 6.95E-83 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS12555 83c038443dd6f3e3f6ac485cb8febaf7 285 PIRSF PIRSF000477 5 284 5.8E-104 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 AL539_RS12555 83c038443dd6f3e3f6ac485cb8febaf7 285 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 35 282 1.5E-122 T 29-03-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL539_RS02045 8d3c1ee8a785d51f8523df6241a3f17e 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS02045 8d3c1ee8a785d51f8523df6241a3f17e 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL539_RS02045 8d3c1ee8a785d51f8523df6241a3f17e 284 Pfam PF01380 SIS domain 124 252 6.2E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL539_RS02045 8d3c1ee8a785d51f8523df6241a3f17e 284 SUPERFAMILY SSF53697 93 278 1.19E-39 T 29-03-2018 AL539_RS02045 8d3c1ee8a785d51f8523df6241a3f17e 284 Gene3D G3DSA:1.10.10.10 1 98 3.7E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02045 8d3c1ee8a785d51f8523df6241a3f17e 284 Gene3D G3DSA:3.40.50.10490 99 279 1.0E-34 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 SUPERFAMILY SSF51905 3 103 1.14E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 SUPERFAMILY SSF51905 220 347 1.14E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 Gene3D G3DSA:3.50.50.60 127 343 7.5E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.2E-13 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.2E-13 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.2E-13 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.2E-13 T 29-03-2018 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 Gene3D G3DSA:3.50.50.60 1 126 2.2E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS17400 ff9b28cccf3f782b14dfaf858f2efa0f 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 2.9E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 SMART SM00357 6 70 3.6E-30 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 PIRSF PIRSF002599 1 70 2.3E-24 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 SUPERFAMILY SSF50249 3 69 6.21E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 Gene3D G3DSA:2.40.50.140 1 70 9.6E-28 T 29-03-2018 AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 43 61 1.7E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS25465 1fc89046037a28b0be2bc690cf2bea93 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 2.5E-28 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS21760 0c2b95001226adbf44b824fad6e47440 337 Gene3D G3DSA:3.30.70.270 174 336 1.0E-51 T 29-03-2018 AL539_RS21760 0c2b95001226adbf44b824fad6e47440 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 1.6E-43 T 29-03-2018 IPR000160 GGDEF domain AL539_RS21760 0c2b95001226adbf44b824fad6e47440 337 SUPERFAMILY SSF55073 183 335 2.9E-45 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS21760 0c2b95001226adbf44b824fad6e47440 337 Gene3D G3DSA:1.20.120.330 38 173 2.2E-4 T 29-03-2018 AL539_RS21760 0c2b95001226adbf44b824fad6e47440 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 4.0E-43 T 29-03-2018 IPR000160 GGDEF domain AL539_RS21760 0c2b95001226adbf44b824fad6e47440 337 SMART SM00267 167 337 5.6E-55 T 29-03-2018 IPR000160 GGDEF domain AL539_RS09890 0dcea3c0037ea2cec99982ecb952dde8 106 Gene3D G3DSA:3.30.750.24 3 104 8.2E-9 T 29-03-2018 IPR002645 STAS domain AL539_RS09890 0dcea3c0037ea2cec99982ecb952dde8 106 Pfam PF13466 STAS domain 15 93 7.3E-20 T 29-03-2018 IPR002645 STAS domain AL539_RS09890 0dcea3c0037ea2cec99982ecb952dde8 106 SUPERFAMILY SSF52091 12 97 3.73E-15 T 29-03-2018 IPR002645 STAS domain AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 180 195 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 Gene3D G3DSA:1.20.1070.10 2 230 0.0011 T 29-03-2018 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 151 163 4.1E-14 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 4.1E-14 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 4.1E-14 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 4.1E-14 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 4.1E-14 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 241 251 4.1E-14 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 3.2E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 3.2E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 3.2E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 3.2E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 3.2E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 3.2E-65 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 228 240 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 55 251 8.1E-77 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL539_RS23695 5b3ea10507cb911bf84fb9e2628e0f3d 252 Pfam PF00813 FliP family 55 247 1.3E-75 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL539_RS23625 4a65bb0a2a26cf9a2d3e649d4e13bffe 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.5E-115 T 29-03-2018 IPR022522 Flagellar motor stator, MotA AL539_RS23625 4a65bb0a2a26cf9a2d3e649d4e13bffe 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site AL539_RS23625 4a65bb0a2a26cf9a2d3e649d4e13bffe 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 238 3.2E-9 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.1310 3029 3134 0.089 T 29-03-2018 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.1310 502 670 0.0097 T 29-03-2018 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.1310 3136 3262 7.6E-6 T 29-03-2018 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.1310 1574 1734 3.3E-5 T 29-03-2018 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.1310 2943 3028 0.0012 T 29-03-2018 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.1310 1355 1458 0.45 T 29-03-2018 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.650 2281 2388 0.013 T 29-03-2018 AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.10 2771 2869 9.3E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.10 2160 2260 0.29 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.10 2578 2676 4.5E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS20060 fbadd5ffe9c80ff634b544e63f9599d7 3277 Gene3D G3DSA:2.60.40.10 415 501 0.048 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS11415 761a605988dbfaedef00718805203b3c 183 Pfam PF04345 Chorismate lyase 18 182 4.3E-57 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AL539_RS11415 761a605988dbfaedef00718805203b3c 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.364 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AL539_RS11415 761a605988dbfaedef00718805203b3c 183 Gene3D G3DSA:3.40.1410.10 9 178 7.8E-42 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS11415 761a605988dbfaedef00718805203b3c 183 SUPERFAMILY SSF64288 11 178 1.1E-44 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_RS16940 21e045a79b8f8b0be69b799313b87a0c 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 3.4E-26 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL539_RS16940 21e045a79b8f8b0be69b799313b87a0c 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 3.7E-71 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL539_RS16940 21e045a79b8f8b0be69b799313b87a0c 399 Pfam PF07670 Nucleoside recognition 87 182 1.6E-6 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS16940 21e045a79b8f8b0be69b799313b87a0c 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 2.0E-133 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL539_RS02365 810dc990bdc553a92c4fa1726332a67f 124 Pfam PF03788 LrgA family 25 115 1.1E-24 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 AL539_RS02365 810dc990bdc553a92c4fa1726332a67f 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.791 T 29-03-2018 IPR022957 Uncharacterised protein family UPF0299 AL539_RS18345 d59c88cf7adda69f68e35251271654aa 227 SUPERFAMILY SSF50630 87 218 5.25E-43 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS18345 d59c88cf7adda69f68e35251271654aa 227 Pfam PF05618 Putative ATP-dependant zinc protease 87 221 1.1E-43 T 29-03-2018 AL539_RS18345 d59c88cf7adda69f68e35251271654aa 227 Gene3D G3DSA:2.40.70.10 84 211 5.9E-45 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS25870 186931b3f741cdcec60284c83973084f 223 Gene3D G3DSA:3.40.50.880 1 223 2.8E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS25870 186931b3f741cdcec60284c83973084f 223 Pfam PF01965 DJ-1/PfpI family 26 220 1.6E-13 T 29-03-2018 IPR002818 DJ-1/PfpI AL539_RS25870 186931b3f741cdcec60284c83973084f 223 SUPERFAMILY SSF52317 1 222 1.46E-57 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS23810 ae87aa3f924852399381e63d97e139cc 231 Pfam PF06468 Spondin_N 45 164 1.6E-10 T 29-03-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL539_RS10430 0d2500d814b242c655331212afa216f0 118 SUPERFAMILY SSF75169 3 118 4.06E-36 T 29-03-2018 IPR027396 DsrEFH-like AL539_RS10430 0d2500d814b242c655331212afa216f0 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 3.8E-46 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF AL539_RS10430 0d2500d814b242c655331212afa216f0 118 Pfam PF02635 DsrE/DsrF-like family 4 118 1.8E-25 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL539_RS10430 0d2500d814b242c655331212afa216f0 118 Gene3D G3DSA:3.40.1260.10 2 118 5.0E-21 T 29-03-2018 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 37.939 T 29-03-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 Gene3D G3DSA:3.20.20.70 4 339 2.7E-61 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 Pfam PF01070 FMN-dependent dehydrogenase 16 106 2.7E-10 T 29-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 Pfam PF01070 FMN-dependent dehydrogenase 159 335 1.1E-16 T 29-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 SMART SM01240 26 339 0.007 T 29-03-2018 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 338 2.3E-115 T 29-03-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 SUPERFAMILY SSF51395 26 337 4.49E-75 T 29-03-2018 AL539_RS21405 160699b29c7cad608f2c9f62e70daeb7 339 PIRSF PIRSF003314 1 339 3.9E-118 T 29-03-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 Gene3D G3DSA:3.40.50.720 2 243 4.4E-74 T 29-03-2018 AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 2.0E-62 T 29-03-2018 AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.9E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.9E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.9E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 0.0058 T 29-03-2018 AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 SUPERFAMILY SSF51735 2 242 1.53E-80 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.9E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.9E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.9E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.9E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS22190 6f47c77355d9eeabaa2388cd5a4f41fc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.9E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS24500 16f0d5f04d2839c40214c86ba03f231a 369 Pfam PF01553 Acyltransferase 92 194 1.1E-9 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS24500 16f0d5f04d2839c40214c86ba03f231a 369 Gene3D G3DSA:3.40.1130.10 54 347 4.4E-19 T 29-03-2018 AL539_RS24500 16f0d5f04d2839c40214c86ba03f231a 369 SUPERFAMILY SSF69593 89 244 1.31E-8 T 29-03-2018 AL539_RS08050 22a51635182650167b2dac398cbe9db8 142 SUPERFAMILY SSF82649 4 141 4.13E-50 T 29-03-2018 AL539_RS08050 22a51635182650167b2dac398cbe9db8 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 6.4E-48 T 29-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AL539_RS08050 22a51635182650167b2dac398cbe9db8 142 Gene3D G3DSA:3.90.1010.10 2 142 1.9E-49 T 29-03-2018 AL539_RS08050 22a51635182650167b2dac398cbe9db8 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 8.6E-47 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AL539_RS07820 8858cec26c94425557b0c7c98699b539 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.0E-48 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 AL539_RS07820 8858cec26c94425557b0c7c98699b539 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.1 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 Gene3D G3DSA:1.10.10.10 94 182 3.8E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 SUPERFAMILY SSF88659 120 180 2.8E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 Gene3D G3DSA:1.10.1740.10 21 93 1.3E-19 T 29-03-2018 AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 SUPERFAMILY SSF88946 27 109 5.1E-21 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 Pfam PF04542 Sigma-70 region 2 33 99 4.2E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 8.3E-23 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS07170 885420327c71407c856f2b3faf2a3636 191 Pfam PF08281 Sigma-70, region 4 123 175 5.8E-10 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL539_RS20495 113e21b8a0dbc03f61276cee5d7c25e9 105 Gene3D G3DSA:3.40.1440.10 1 97 7.2E-8 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS20495 113e21b8a0dbc03f61276cee5d7c25e9 105 SUPERFAMILY SSF82771 8 79 6.28E-14 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS20495 113e21b8a0dbc03f61276cee5d7c25e9 105 SMART SM00465 8 86 7.6E-5 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS20495 113e21b8a0dbc03f61276cee5d7c25e9 105 Pfam PF01541 GIY-YIG catalytic domain 9 79 1.2E-16 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AL539_RS12295 1b36f372eff42f399c3db4b3b5d5a780 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 2.6E-19 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AL539_RS12295 1b36f372eff42f399c3db4b3b5d5a780 145 Gene3D G3DSA:2.60.40.790 6 137 5.7E-21 T 29-03-2018 IPR008978 HSP20-like chaperone AL539_RS12295 1b36f372eff42f399c3db4b3b5d5a780 145 SUPERFAMILY SSF49764 6 137 2.2E-23 T 29-03-2018 IPR008978 HSP20-like chaperone AL539_RS05165 6d6ba2ae33d61536c4f6c433febea35f 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 6.7E-15 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS12880 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 SUPERFAMILY SSF55174 8 105 4.45E-31 T 29-03-2018 AL539_RS12880 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 Pfam PF01479 S4 domain 8 54 2.4E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS12880 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 PIRSF PIRSF016821 5 128 6.0E-43 T 29-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AL539_RS12880 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 Gene3D G3DSA:3.10.290.10 2 104 7.5E-27 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS12880 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 SMART SM00363 8 71 2.5E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS15230 4d05fcf3f6610e9da7e504b2bad0da4a 544 ProSitePatterns PS00510 Malate synthase signature. 277 292 - T 29-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL539_RS15230 4d05fcf3f6610e9da7e504b2bad0da4a 544 PIRSF PIRSF001363 11 544 6.1E-251 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL539_RS15230 4d05fcf3f6610e9da7e504b2bad0da4a 544 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 34 543 1.2E-263 T 29-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL539_RS15230 4d05fcf3f6610e9da7e504b2bad0da4a 544 Gene3D G3DSA:3.20.20.360 92 425 6.9E-109 T 29-03-2018 AL539_RS15230 4d05fcf3f6610e9da7e504b2bad0da4a 544 Pfam PF01274 Malate synthase 25 543 2.6E-202 T 29-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL539_RS15230 4d05fcf3f6610e9da7e504b2bad0da4a 544 SUPERFAMILY SSF51645 22 543 3.27E-187 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL539_RS15230 4d05fcf3f6610e9da7e504b2bad0da4a 544 Gene3D G3DSA:1.20.1220.12 426 543 3.7E-46 T 29-03-2018 AL539_RS17305 e126a0229baf5815ca3d536310f1c314 1013 Gene3D G3DSA:2.60.40.1080 23 123 5.4E-6 T 29-03-2018 AL539_RS17305 e126a0229baf5815ca3d536310f1c314 1013 Gene3D G3DSA:2.60.40.1180 573 653 0.048 T 29-03-2018 AL539_RS17305 e126a0229baf5815ca3d536310f1c314 1013 Gene3D G3DSA:2.60.40.1180 654 730 0.013 T 29-03-2018 AL539_RS18440 b95744ef9ba3ec1a876ba42192b29636 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 1.5E-93 T 29-03-2018 IPR021290 Protein of unknown function DUF2861 AL539_RS03575 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Gene3D G3DSA:3.30.70.20 72 113 2.1E-18 T 29-03-2018 AL539_RS03575 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Gene3D G3DSA:3.30.70.20 2 71 8.2E-11 T 29-03-2018 AL539_RS03575 e6cc7608b2d9e7614aa6164ac0b39ae9 202 SUPERFAMILY SSF54862 1 183 1.26E-47 T 29-03-2018 AL539_RS03575 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 8.1E-10 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS03575 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Gene3D G3DSA:3.30.70.20 114 199 1.4E-14 T 29-03-2018 AL539_RS03575 e6cc7608b2d9e7614aa6164ac0b39ae9 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS05375 61e07cf0503d24664a6daa1eb60359eb 42 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 2.2E-12 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS17100 b54d8dd755bfdf8255b221274c28b112 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 1.3E-117 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_RS17100 b54d8dd755bfdf8255b221274c28b112 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 2.0E-85 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL539_RS17100 b54d8dd755bfdf8255b221274c28b112 453 PIRSF PIRSF006066 271 447 1.0E-49 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL539_RS17100 b54d8dd755bfdf8255b221274c28b112 453 PIRSF PIRSF006066 1 270 2.6E-91 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 6.0E-37 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.3E-74 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 PIRSF PIRSF000441 7 84 66.0 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 PIRSF PIRSF000441 75 266 3.7E-55 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 SMART SM00971 9 113 4.4E-58 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Gene3D G3DSA:2.160.10.10 134 264 9.9E-28 T 29-03-2018 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 SUPERFAMILY SSF51161 8 258 7.37E-63 T 29-03-2018 IPR011004 Trimeric LpxA-like AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Gene3D G3DSA:1.10.3130.10 1 133 1.2E-37 T 29-03-2018 AL539_RS10790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 29-03-2018 IPR001451 Hexapeptide repeat AL539_RS13125 362b0e6396c2008d941008deaeb1a4a4 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.3E-69 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS13125 362b0e6396c2008d941008deaeb1a4a4 213 SUPERFAMILY SSF53271 2 212 1.99E-49 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS13125 362b0e6396c2008d941008deaeb1a4a4 213 Gene3D G3DSA:3.40.50.2020 1 193 7.8E-49 T 29-03-2018 AL539_RS13125 362b0e6396c2008d941008deaeb1a4a4 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.096 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL539_RS13125 362b0e6396c2008d941008deaeb1a4a4 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 5.2E-12 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL539_RS04825 7df40b2367738d5f9b81ec0f6818bc56 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 2.0E-11 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS15365 489cad174e508aeae4f13d7cf74be0f7 204 PIRSF PIRSF006170 1 204 2.7E-52 T 29-03-2018 IPR026039 Uncharacterised protein family UPF0070 AL539_RS15365 489cad174e508aeae4f13d7cf74be0f7 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.4E-54 T 29-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AL539_RS15365 489cad174e508aeae4f13d7cf74be0f7 204 SUPERFAMILY SSF48452 89 188 4.7E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS15365 489cad174e508aeae4f13d7cf74be0f7 204 Gene3D G3DSA:1.25.40.10 12 204 7.6E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 Gene3D G3DSA:3.10.20.30 1 104 2.4E-32 T 29-03-2018 IPR012675 Beta-grasp domain AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 9.4E-30 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 SUPERFAMILY SSF46548 105 233 4.01E-40 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 29-03-2018 AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 Gene3D G3DSA:1.10.1060.10 105 236 3.0E-30 T 29-03-2018 AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 SUPERFAMILY SSF54292 1 104 3.18E-29 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL539_RS16785 c93c5d1efeff1d9241e96dd220896354 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL539_RS24470 aa350c58170eca084adb8a6b17f0a7fe 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 9.4E-21 T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AL539_RS24470 aa350c58170eca084adb8a6b17f0a7fe 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AL539_RS19245 b68df97b0d3d10ba24ee27fe38843bd9 537 Pfam PF08774 VRR-NUC domain 431 535 2.0E-24 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL539_RS19245 b68df97b0d3d10ba24ee27fe38843bd9 537 SMART SM00990 432 536 1.0E-21 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL539_RS17200 5df73a426d6d2dfea51a8fe05dd34000 288 SUPERFAMILY SSF52096 22 284 5.27E-78 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS17200 5df73a426d6d2dfea51a8fe05dd34000 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 8.5E-78 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL539_RS17200 5df73a426d6d2dfea51a8fe05dd34000 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 4.2E-145 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL539_RS17200 5df73a426d6d2dfea51a8fe05dd34000 288 Gene3D G3DSA:1.10.12.10 228 276 1.5E-13 T 29-03-2018 IPR014748 Crontonase, C-terminal AL539_RS17200 5df73a426d6d2dfea51a8fe05dd34000 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.227 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL539_RS17200 5df73a426d6d2dfea51a8fe05dd34000 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AL539_RS17200 5df73a426d6d2dfea51a8fe05dd34000 288 Gene3D G3DSA:3.90.226.10 5 225 5.3E-63 T 29-03-2018 AL539_RS13765 7c630ce57ffa5c2c1dd46eda4adfefe4 570 Gene3D G3DSA:3.10.20.310 97 184 3.5E-16 T 29-03-2018 AL539_RS13765 7c630ce57ffa5c2c1dd46eda4adfefe4 570 Pfam PF01103 Surface antigen 276 567 1.4E-29 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL539_RS13765 7c630ce57ffa5c2c1dd46eda4adfefe4 570 Pfam PF17243 POTRA domain TamA domain 1 25 95 2.2E-18 T 29-03-2018 IPR035243 TamA, POTRA domain 1 AL539_RS13765 7c630ce57ffa5c2c1dd46eda4adfefe4 570 Gene3D G3DSA:2.40.160.50 217 569 2.4E-55 T 29-03-2018 AL539_RS13765 7c630ce57ffa5c2c1dd46eda4adfefe4 570 Pfam PF07244 Surface antigen variable number repeat 187 247 4.2E-5 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL539_RS13765 7c630ce57ffa5c2c1dd46eda4adfefe4 570 Pfam PF07244 Surface antigen variable number repeat 101 163 1.2E-6 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL539_RS13765 7c630ce57ffa5c2c1dd46eda4adfefe4 570 Gene3D G3DSA:3.10.20.310 23 94 0.45 T 29-03-2018 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 Pfam PF01578 Cytochrome C assembly protein 29 184 1.3E-32 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL539_RS07265 d43c6c5d583fa1c8dccca14185c4ead3 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.7E-85 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS15380 235f2c50791ebf07422b2bd329314aa1 291 Gene3D G3DSA:3.30.980.10 121 287 5.8E-20 T 29-03-2018 AL539_RS15380 235f2c50791ebf07422b2bd329314aa1 291 SUPERFAMILY SSF55186 121 271 9.94E-15 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AL539_RS16730 6908bdbef8756e929b10d44329fd8a6a 177 Gene3D G3DSA:3.40.50.360 75 175 1.5E-20 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS16730 6908bdbef8756e929b10d44329fd8a6a 177 Gene3D G3DSA:3.40.50.360 1 74 9.8E-17 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS16730 6908bdbef8756e929b10d44329fd8a6a 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 6.5E-71 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL539_RS16730 6908bdbef8756e929b10d44329fd8a6a 177 SUPERFAMILY SSF52218 4 172 1.1E-50 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS16730 6908bdbef8756e929b10d44329fd8a6a 177 Pfam PF00258 Flavodoxin 6 162 1.2E-32 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL539_RS16730 6908bdbef8756e929b10d44329fd8a6a 177 PIRSF PIRSF038996 1 174 2.5E-66 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL539_RS16730 6908bdbef8756e929b10d44329fd8a6a 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL539_RS05680 da196d01b26473e00d91b036971678b7 243 Gene3D G3DSA:3.30.420.10 45 239 4.2E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS05680 da196d01b26473e00d91b036971678b7 243 SUPERFAMILY SSF53098 45 231 7.19E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS05680 da196d01b26473e00d91b036971678b7 243 Pfam PF00929 Exonuclease 54 224 3.8E-14 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS05680 da196d01b26473e00d91b036971678b7 243 SMART SM00479 52 233 4.5E-22 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS05680 da196d01b26473e00d91b036971678b7 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 48 233 5.5E-24 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL539_RS23690 798eb6c03b9dd00637698d509e58ebb3 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.7E-26 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS23690 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.8E-14 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS23690 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.8E-14 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS23690 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.8E-14 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS23690 798eb6c03b9dd00637698d509e58ebb3 89 PIRSF PIRSF004669 1 89 4.6E-26 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS23690 798eb6c03b9dd00637698d509e58ebb3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.0E-29 T 29-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AL539_RS13530 2d175bb8a55ff69ba74ee7ff553af54c 200 SUPERFAMILY SSF52166 9 199 4.06E-73 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL539_RS13530 2d175bb8a55ff69ba74ee7ff553af54c 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.872 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13530 2d175bb8a55ff69ba74ee7ff553af54c 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.4E-76 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13530 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 2 143 2.8E-49 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL539_RS13530 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 144 198 9.3E-11 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AL539_RS13530 2d175bb8a55ff69ba74ee7ff553af54c 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 29-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AL539_RS12840 a461fba93fffbd10c2435f1c893192fc 180 Gene3D G3DSA:3.40.50.300 1 17 9.0E-4 T 29-03-2018 AL539_RS12840 a461fba93fffbd10c2435f1c893192fc 180 SUPERFAMILY SSF52540 4 171 1.1E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12840 a461fba93fffbd10c2435f1c893192fc 180 Gene3D G3DSA:3.40.50.300 18 169 1.8E-10 T 29-03-2018 AL539_RS12840 a461fba93fffbd10c2435f1c893192fc 180 Pfam PF13521 AAA domain 4 164 7.1E-37 T 29-03-2018 AL539_RS22740 d106c175064caf224df679f9a9b0f7ad 194 Gene3D G3DSA:3.40.50.360 1 194 1.8E-32 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS22740 d106c175064caf224df679f9a9b0f7ad 194 Pfam PF03358 NADPH-dependent FMN reductase 57 137 4.5E-13 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL539_RS22740 d106c175064caf224df679f9a9b0f7ad 194 SUPERFAMILY SSF52218 2 191 4.6E-41 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS12525 fe69bf78a0205a274b194f1ea9197e30 134 SUPERFAMILY SSF103481 6 108 7.85E-14 T 29-03-2018 AL539_RS12525 fe69bf78a0205a274b194f1ea9197e30 134 Pfam PF00893 Small Multidrug Resistance protein 6 94 5.0E-19 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL539_RS17435 77c41c949d51f627aa278d2b485adcd9 414 Gene3D G3DSA:1.20.1250.20 1 408 0.043 T 29-03-2018 AL539_RS17435 77c41c949d51f627aa278d2b485adcd9 414 Pfam PF02687 FtsX-like permease family 301 407 1.2E-12 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS17435 77c41c949d51f627aa278d2b485adcd9 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 1.0E-216 T 29-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 AL539_RS17435 77c41c949d51f627aa278d2b485adcd9 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 5.1E-13 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AL539_RS17435 77c41c949d51f627aa278d2b485adcd9 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.6E-158 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL539_RS13655 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13655 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13655 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 3.8E-50 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13655 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13655 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13655 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SMART SM00649 9 141 2.2E-82 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SUPERFAMILY SSF54747 3 73 5.1E-30 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Gene3D G3DSA:3.30.1550.10 3 72 3.3E-34 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 29-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 1.0E-14 T 29-03-2018 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.1E-64 T 29-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.7E-29 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL539_RS11210 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Gene3D G3DSA:1.10.10.250 73 141 7.6E-23 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL539_RS03460 3a9a8fdbaad171a4c7cb727bbfcd2927 137 Pfam PF00293 NUDIX domain 8 111 2.5E-8 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS03460 3a9a8fdbaad171a4c7cb727bbfcd2927 137 Gene3D G3DSA:3.90.79.10 2 134 3.7E-16 T 29-03-2018 AL539_RS03460 3a9a8fdbaad171a4c7cb727bbfcd2927 137 SUPERFAMILY SSF55811 8 112 3.93E-16 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS24310 2e755b35cf2d41a7cbc0ffd332e45fec 344 Pfam PF00107 Zinc-binding dehydrogenase 160 296 4.3E-22 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL539_RS24310 2e755b35cf2d41a7cbc0ffd332e45fec 344 SMART SM00829 20 338 1.4E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL539_RS24310 2e755b35cf2d41a7cbc0ffd332e45fec 344 SUPERFAMILY SSF51735 126 305 2.58E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS24310 2e755b35cf2d41a7cbc0ffd332e45fec 344 Gene3D G3DSA:3.40.50.720 151 281 3.6E-30 T 29-03-2018 AL539_RS24310 2e755b35cf2d41a7cbc0ffd332e45fec 344 Gene3D G3DSA:3.90.180.10 1 150 2.7E-32 T 29-03-2018 AL539_RS24310 2e755b35cf2d41a7cbc0ffd332e45fec 344 SUPERFAMILY SSF50129 5 145 7.93E-43 T 29-03-2018 IPR011032 GroES-like AL539_RS24310 2e755b35cf2d41a7cbc0ffd332e45fec 344 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 1.2E-40 T 29-03-2018 AL539_RS23990 bcba26cc16e0e76e97f417b12ff934a4 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 8.8E-44 T 29-03-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 AL539_RS23990 bcba26cc16e0e76e97f417b12ff934a4 182 Hamap MF_01572 UPF0397 protein . 1 182 21.259 T 29-03-2018 IPR022914 Protein of unknown function UPF0397 AL539_RS00440 cf10ebe257099e425d7e132aeeb5df03 361 Pfam PF13481 AAA domain 24 202 2.5E-19 T 29-03-2018 AL539_RS00440 cf10ebe257099e425d7e132aeeb5df03 361 Gene3D G3DSA:3.40.50.300 28 267 1.3E-12 T 29-03-2018 AL539_RS00440 cf10ebe257099e425d7e132aeeb5df03 361 SUPERFAMILY SSF52540 126 261 4.66E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00440 cf10ebe257099e425d7e132aeeb5df03 361 SUPERFAMILY SSF52540 30 85 4.66E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07350 836f09ad9c4961235ab8d882b7585a45 89 PIRSF PIRSF004669 1 89 8.7E-30 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS07350 836f09ad9c4961235ab8d882b7585a45 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.4E-33 T 29-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AL539_RS07350 836f09ad9c4961235ab8d882b7585a45 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS07350 836f09ad9c4961235ab8d882b7585a45 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS07350 836f09ad9c4961235ab8d882b7585a45 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS07350 836f09ad9c4961235ab8d882b7585a45 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-28 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL539_RS07345 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 5.0E-16 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS07345 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.0E-16 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS07345 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 5.0E-16 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS07345 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.0E-16 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS07345 daa6f63047dac1b4f453145c2556e146 260 Pfam PF01311 Bacterial export proteins, family 1 13 245 5.3E-56 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS07345 daa6f63047dac1b4f453145c2556e146 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 253 4.1E-73 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AL539_RS24680 33aafede763af867de1954d4919d5551 808 Pfam PF01752 Collagenase 274 558 3.6E-113 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS24680 33aafede763af867de1954d4919d5551 808 Pfam PF08453 Peptidase family M9 N-terminal 31 212 8.3E-55 T 29-03-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL539_RS24680 33aafede763af867de1954d4919d5551 808 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 605 675 9.1E-9 T 29-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL539_RS24680 33aafede763af867de1954d4919d5551 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 4.0E-31 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS24680 33aafede763af867de1954d4919d5551 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 4.0E-31 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS24680 33aafede763af867de1954d4919d5551 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 4.0E-31 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS24680 33aafede763af867de1954d4919d5551 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 4.0E-31 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS24680 33aafede763af867de1954d4919d5551 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 4.0E-31 T 29-03-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 AL539_RS22305 59fcca1ddec2db4ca55a3cfd1ac6826b 216 Pfam PF00805 Pentapeptide repeats (8 copies) 79 105 5.2E-5 T 29-03-2018 IPR001646 Pentapeptide repeat AL539_RS22305 59fcca1ddec2db4ca55a3cfd1ac6826b 216 Gene3D G3DSA:2.160.20.80 2 216 4.2E-40 T 29-03-2018 AL539_RS22305 59fcca1ddec2db4ca55a3cfd1ac6826b 216 SUPERFAMILY SSF141571 53 215 4.19E-36 T 29-03-2018 AL539_RS22305 59fcca1ddec2db4ca55a3cfd1ac6826b 216 SUPERFAMILY SSF141571 6 50 7.59E-9 T 29-03-2018 AL539_RS22305 59fcca1ddec2db4ca55a3cfd1ac6826b 216 Pfam PF13599 Pentapeptide repeats (9 copies) 21 74 1.4E-7 T 29-03-2018 IPR001646 Pentapeptide repeat AL539_RS22305 59fcca1ddec2db4ca55a3cfd1ac6826b 216 Pfam PF13599 Pentapeptide repeats (9 copies) 114 166 4.6E-9 T 29-03-2018 IPR001646 Pentapeptide repeat AL539_RS17090 f9a58faa2a14f4db2c96238cc0ddfaf7 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 3.6E-80 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL539_RS17090 f9a58faa2a14f4db2c96238cc0ddfaf7 332 PIRSF PIRSF006470 1 332 1.1E-124 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL539_RS17090 f9a58faa2a14f4db2c96238cc0ddfaf7 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 6.6E-104 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL539_RS14495 c82cd0eb1478dab2bc730cd62fbeca6c 211 Gene3D G3DSA:3.40.30.10 1 88 9.0E-23 T 29-03-2018 AL539_RS14495 c82cd0eb1478dab2bc730cd62fbeca6c 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS14495 c82cd0eb1478dab2bc730cd62fbeca6c 211 Gene3D G3DSA:1.20.1050.10 89 209 1.8E-14 T 29-03-2018 AL539_RS14495 c82cd0eb1478dab2bc730cd62fbeca6c 211 SUPERFAMILY SSF47616 82 208 1.25E-23 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS14495 c82cd0eb1478dab2bc730cd62fbeca6c 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS14495 c82cd0eb1478dab2bc730cd62fbeca6c 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 9.1E-9 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AL539_RS13240 492656f3ad3bb5871ae00cc9c2213c07 363 SUPERFAMILY SSF53383 6 360 4.52E-88 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS13240 492656f3ad3bb5871ae00cc9c2213c07 363 Gene3D G3DSA:3.40.640.10 15 229 7.7E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS13240 492656f3ad3bb5871ae00cc9c2213c07 363 Gene3D G3DSA:3.90.1150.10 230 361 4.4E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS13240 492656f3ad3bb5871ae00cc9c2213c07 363 PIRSF PIRSF000390 1 362 2.3E-101 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL539_RS13240 492656f3ad3bb5871ae00cc9c2213c07 363 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 21 359 3.8E-90 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL539_RS05055 8a62c7629a5e01c1719cf89ef41a8d35 198 Gene3D G3DSA:3.40.50.880 1 189 3.1E-20 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS05055 8a62c7629a5e01c1719cf89ef41a8d35 198 Pfam PF01965 DJ-1/PfpI family 2 155 5.3E-8 T 29-03-2018 IPR002818 DJ-1/PfpI AL539_RS05055 8a62c7629a5e01c1719cf89ef41a8d35 198 SUPERFAMILY SSF52317 1 172 8.78E-20 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS09160 c981eb54e72c70fc3e305a5c581cd906 208 Pfam PF01810 LysE type translocator 15 202 1.4E-42 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS15010 1435da2ca66152a6064f4786ab5a1d98 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 346 2.4E-163 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL539_RS15010 1435da2ca66152a6064f4786ab5a1d98 358 SUPERFAMILY SSF51569 8 345 5.34E-139 T 29-03-2018 AL539_RS15010 1435da2ca66152a6064f4786ab5a1d98 358 Pfam PF00793 DAHP synthetase I family 41 340 3.8E-105 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL539_RS15010 1435da2ca66152a6064f4786ab5a1d98 358 PIRSF PIRSF001361 1 354 8.1E-164 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL539_RS15010 1435da2ca66152a6064f4786ab5a1d98 358 Gene3D G3DSA:3.20.20.70 9 354 5.2E-129 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS00140 3e1af8f2978fbf4f510e1a770d94c6b2 305 Pfam PF13737 Transposase DDE domain 19 128 2.9E-42 T 29-03-2018 IPR025668 Transposase DDE domain AL539_RS02050 d323a0d029e5f8b6c3bb52972d5f8e86 548 Gene3D G3DSA:3.90.1150.10 409 533 3.3E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS02050 d323a0d029e5f8b6c3bb52972d5f8e86 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 8.4E-57 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL539_RS02050 d323a0d029e5f8b6c3bb52972d5f8e86 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.1E-299 T 29-03-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent AL539_RS02050 d323a0d029e5f8b6c3bb52972d5f8e86 548 Gene3D G3DSA:3.40.640.10 121 386 1.3E-49 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS02050 d323a0d029e5f8b6c3bb52972d5f8e86 548 SUPERFAMILY SSF53383 29 530 1.97E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS15005 783cdeb2675f282f67ac3bb18715d6d3 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.025 T 29-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL539_RS15005 783cdeb2675f282f67ac3bb18715d6d3 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AL539_RS15005 783cdeb2675f282f67ac3bb18715d6d3 327 SUPERFAMILY SSF51445 2 300 5.69E-86 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS15005 783cdeb2675f282f67ac3bb18715d6d3 327 Gene3D G3DSA:3.20.20.300 1 296 3.9E-75 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL539_RS15005 783cdeb2675f282f67ac3bb18715d6d3 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 285 1.0E-83 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL539_RS23235 4610e78f4d303a59a15868dc1cf97360 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.761 T 29-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AL539_RS23235 4610e78f4d303a59a15868dc1cf97360 289 Gene3D G3DSA:3.40.1190.20 1 284 1.7E-57 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS23235 4610e78f4d303a59a15868dc1cf97360 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 8.7E-104 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL539_RS23235 4610e78f4d303a59a15868dc1cf97360 289 SUPERFAMILY SSF53613 2 274 2.03E-68 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS23235 4610e78f4d303a59a15868dc1cf97360 289 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 1.2E-20 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL539_RS20370 bdc76a162145adbffc52d736d58c44de 151 PIRSF PIRSF006105 1 151 2.6E-47 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL539_RS20370 bdc76a162145adbffc52d736d58c44de 151 SUPERFAMILY SSF48695 38 148 9.78E-41 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS20370 bdc76a162145adbffc52d736d58c44de 151 Gene3D G3DSA:1.10.1130.10 65 131 8.6E-29 T 29-03-2018 AL539_RS20370 bdc76a162145adbffc52d736d58c44de 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 2.1E-48 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL539_RS20720 e3a513f1792ebd16b76d9e315a8f8243 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 8.8E-16 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL539_RS20720 e3a513f1792ebd16b76d9e315a8f8243 310 Gene3D G3DSA:3.30.360.10 128 306 2.8E-7 T 29-03-2018 AL539_RS20720 e3a513f1792ebd16b76d9e315a8f8243 310 SUPERFAMILY SSF51735 1 166 3.84E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS20720 e3a513f1792ebd16b76d9e315a8f8243 310 SUPERFAMILY SSF55347 121 264 1.31E-49 T 29-03-2018 AL539_RS20720 e3a513f1792ebd16b76d9e315a8f8243 310 Gene3D G3DSA:3.40.50.720 1 127 8.3E-27 T 29-03-2018 AL539_RS23445 6f03aa06458bfd5f1a7227febf472f54 478 Gene3D G3DSA:1.10.10.60 183 200 0.0047 T 29-03-2018 AL539_RS23445 6f03aa06458bfd5f1a7227febf472f54 478 Gene3D G3DSA:2.60.40.10 284 377 6.2E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS23445 6f03aa06458bfd5f1a7227febf472f54 478 Gene3D G3DSA:1.10.10.60 148 182 6.3E-4 T 29-03-2018 AL539_RS23445 6f03aa06458bfd5f1a7227febf472f54 478 Gene3D G3DSA:1.10.10.60 211 274 3.6E-13 T 29-03-2018 AL539_RS23445 6f03aa06458bfd5f1a7227febf472f54 478 Pfam PF12833 Helix-turn-helix domain 182 259 4.9E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS23445 6f03aa06458bfd5f1a7227febf472f54 478 SUPERFAMILY SSF46689 212 262 1.97E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS23445 6f03aa06458bfd5f1a7227febf472f54 478 SMART SM00342 175 257 7.6E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS23955 5286f72371285867cb040434a1048572 166 Gene3D G3DSA:3.40.630.30 1 165 3.1E-34 T 29-03-2018 AL539_RS23955 5286f72371285867cb040434a1048572 166 SUPERFAMILY SSF55729 3 161 5.06E-38 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS23955 5286f72371285867cb040434a1048572 166 Pfam PF00583 Acetyltransferase (GNAT) family 36 136 1.3E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS15195 ee86a499d85ff28fd0eb3583f3261c02 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 3.5E-76 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL539_RS15195 ee86a499d85ff28fd0eb3583f3261c02 557 Gene3D G3DSA:1.10.3720.10 9 541 1.2E-39 T 29-03-2018 AL539_RS15195 ee86a499d85ff28fd0eb3583f3261c02 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 5.3E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS15195 ee86a499d85ff28fd0eb3583f3261c02 557 SUPERFAMILY SSF161098 283 538 1.44E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS04385 eb73c886fb102587f82515aea762b695 113 Gene3D G3DSA:1.25.40.10 57 111 7.5E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04385 eb73c886fb102587f82515aea762b695 113 PIRSF PIRSF017117 1 111 1.8E-45 T 29-03-2018 IPR016684 Type III secretion system chaperone, YscY AL539_RS04385 eb73c886fb102587f82515aea762b695 113 Pfam PF14559 Tetratricopeptide repeat 19 71 3.0E-9 T 29-03-2018 AL539_RS04385 eb73c886fb102587f82515aea762b695 113 SUPERFAMILY SSF48452 5 110 7.15E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04385 eb73c886fb102587f82515aea762b695 113 Gene3D G3DSA:1.25.40.10 2 56 1.1E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS06280 0edc3ba201e203755b1d48ef221c7ace 612 PIRSF PIRSF002741 2 574 2.5E-62 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS06280 0edc3ba201e203755b1d48ef221c7ace 612 Gene3D G3DSA:3.10.105.10 338 545 6.8E-35 T 29-03-2018 AL539_RS06280 0edc3ba201e203755b1d48ef221c7ace 612 Gene3D G3DSA:3.90.76.10 81 167 1.8E-20 T 29-03-2018 AL539_RS06280 0edc3ba201e203755b1d48ef221c7ace 612 Gene3D G3DSA:3.40.190.10 168 337 5.2E-21 T 29-03-2018 AL539_RS06280 0edc3ba201e203755b1d48ef221c7ace 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 489 7.1E-60 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS06280 0edc3ba201e203755b1d48ef221c7ace 612 SUPERFAMILY SSF53850 45 566 5.07E-92 T 29-03-2018 AL539_RS23280 e28741cf3eaa777d7f7fd3d53582e9b1 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 3.6E-191 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL539_RS23280 e28741cf3eaa777d7f7fd3d53582e9b1 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 3.2E-127 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL539_RS23280 e28741cf3eaa777d7f7fd3d53582e9b1 726 SUPERFAMILY SSF51445 633 717 2.56E-149 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23280 e28741cf3eaa777d7f7fd3d53582e9b1 726 SUPERFAMILY SSF51445 164 594 2.56E-149 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS23280 e28741cf3eaa777d7f7fd3d53582e9b1 726 Gene3D G3DSA:3.20.20.80 167 720 4.1E-155 T 29-03-2018 AL539_RS25105 73d107fe8b151d6780555cae342469a6 119 Pfam PF00462 Glutaredoxin 43 96 3.0E-11 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL539_RS25105 73d107fe8b151d6780555cae342469a6 119 SUPERFAMILY SSF52833 41 118 2.92E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS25105 73d107fe8b151d6780555cae342469a6 119 Gene3D G3DSA:3.40.30.10 27 119 5.3E-16 T 29-03-2018 AL539_RS19280 f331b969355e9f09a3952f9bb75ccc69 576 SUPERFAMILY SSF53300 99 272 1.23E-15 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS19280 f331b969355e9f09a3952f9bb75ccc69 576 Pfam PF13519 von Willebrand factor type A domain 102 207 1.8E-12 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS19280 f331b969355e9f09a3952f9bb75ccc69 576 Gene3D G3DSA:3.40.50.410 96 518 1.4E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS21850 e3c933f67f864aca2be9a24b6d512478 336 Gene3D G3DSA:3.40.190.10 174 327 4.3E-41 T 29-03-2018 AL539_RS21850 e3c933f67f864aca2be9a24b6d512478 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 1.3E-108 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL539_RS21850 e3c933f67f864aca2be9a24b6d512478 336 Pfam PF16868 NMT1-like family 32 326 7.9E-112 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL539_RS21850 e3c933f67f864aca2be9a24b6d512478 336 Gene3D G3DSA:3.40.190.10 24 165 1.5E-16 T 29-03-2018 AL539_RS21850 e3c933f67f864aca2be9a24b6d512478 336 SUPERFAMILY SSF53850 29 327 3.62E-64 T 29-03-2018 AL539_RS03760 90129b06b320fa203df4392688712ed0 297 Gene3D G3DSA:3.40.50.620 6 238 3.8E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS03760 90129b06b320fa203df4392688712ed0 297 PIRSF PIRSF004976 2 282 6.8E-70 T 29-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AL539_RS03760 90129b06b320fa203df4392688712ed0 297 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 8 269 56.382 T 29-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AL539_RS03760 90129b06b320fa203df4392688712ed0 297 SUPERFAMILY SSF52402 15 233 6.75E-54 T 29-03-2018 AL539_RS03760 90129b06b320fa203df4392688712ed0 297 Pfam PF01171 PP-loop family 41 203 4.9E-16 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL539_RS09880 8f7c31c481c3a3eda0d24885d80df8ed 418 SUPERFAMILY SSF55205 6 417 7.52E-142 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL539_RS09880 8f7c31c481c3a3eda0d24885d80df8ed 418 Gene3D G3DSA:3.65.10.10 221 418 1.6E-43 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL539_RS09880 8f7c31c481c3a3eda0d24885d80df8ed 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 9.2E-123 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL539_RS09880 8f7c31c481c3a3eda0d24885d80df8ed 418 Gene3D G3DSA:3.65.10.10 22 220 1.2E-52 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL539_RS09880 8f7c31c481c3a3eda0d24885d80df8ed 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 1.8E-182 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS09880 8f7c31c481c3a3eda0d24885d80df8ed 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.826 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL539_RS06610 94236dedda1121aa7ba3ec7e14381571 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 315 1.8E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS06610 94236dedda1121aa7ba3ec7e14381571 337 SMART SM00382 53 246 1.7E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS06610 94236dedda1121aa7ba3ec7e14381571 337 Pfam PF00005 ABC transporter 45 196 1.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS06610 94236dedda1121aa7ba3ec7e14381571 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS06610 94236dedda1121aa7ba3ec7e14381571 337 SUPERFAMILY SSF52540 38 268 8.92E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS06610 94236dedda1121aa7ba3ec7e14381571 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 333 3.0E-26 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL539_RS06610 94236dedda1121aa7ba3ec7e14381571 337 Gene3D G3DSA:3.40.50.300 13 334 7.1E-80 T 29-03-2018 AL539_RS15650 df9bc71fcb0dff023ff0e71901e9a561 233 Pfam PF01863 Protein of unknown function DUF45 24 227 1.6E-46 T 29-03-2018 IPR002725 Protein of unknown function DUF45 AL539_RS23935 1c71e3c5a0cefde2d894d0095648c322 319 SUPERFAMILY SSF56935 23 319 1.77E-50 T 29-03-2018 AL539_RS23935 1c71e3c5a0cefde2d894d0095648c322 319 Gene3D G3DSA:2.40.160.10 31 319 1.1E-34 T 29-03-2018 AL539_RS23935 1c71e3c5a0cefde2d894d0095648c322 319 Pfam PF13609 Gram-negative porin 7 298 2.5E-28 T 29-03-2018 AL539_RS13315 5295765994827821d4cfc1802909489c 357 SUPERFAMILY SSF51735 1 341 6.53E-91 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13315 5295765994827821d4cfc1802909489c 357 Gene3D G3DSA:3.90.25.10 202 354 1.6E-48 T 29-03-2018 AL539_RS13315 5295765994827821d4cfc1802909489c 357 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 5.1E-93 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13315 5295765994827821d4cfc1802909489c 357 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 344 2.5E-152 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL539_RS13315 5295765994827821d4cfc1802909489c 357 Gene3D G3DSA:3.40.50.720 1 201 1.6E-35 T 29-03-2018 AL539_RS07555 8e053f4d1ac61d191a5d8d1697f7c07d 116 SUPERFAMILY SSF52833 2 116 7.48E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS07555 8e053f4d1ac61d191a5d8d1697f7c07d 116 Pfam PF03960 ArsC family 6 115 3.0E-20 T 29-03-2018 IPR006660 Arsenate reductase-like AL539_RS07555 8e053f4d1ac61d191a5d8d1697f7c07d 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 2.8E-47 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AL539_RS07555 8e053f4d1ac61d191a5d8d1697f7c07d 116 Gene3D G3DSA:3.40.30.10 1 116 6.2E-37 T 29-03-2018 AL539_RS21805 38d29cf845a56f7cca8ae9d0010a9caa 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 4.3E-47 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 AL539_RS09050 90aca4a15c0bfb870305441b950c98f4 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 5.5E-31 T 29-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC AL539_RS09050 90aca4a15c0bfb870305441b950c98f4 156 PIRSF PIRSF004923 1 156 9.6E-38 T 29-03-2018 IPR026268 Protein RseC AL539_RS14800 64f41a184f70cfc28fe5c77fe4fa81cf 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 8.2E-26 T 29-03-2018 IPR021932 Protein of unknown function DUF3545 AL539_RS04560 ff48dd292a2e5f084ff18a041b3b8dfa 148 Pfam PF05932 Tir chaperone protein (CesT) family 10 124 9.5E-14 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL539_RS04560 ff48dd292a2e5f084ff18a041b3b8dfa 148 Gene3D G3DSA:3.30.1460.10 1 132 1.3E-22 T 29-03-2018 AL539_RS04560 ff48dd292a2e5f084ff18a041b3b8dfa 148 SUPERFAMILY SSF69635 4 139 5.97E-26 T 29-03-2018 AL539_RS16635 832f8902aad04b00d41621c1ad2aa01c 181 SUPERFAMILY SSF56300 2 165 1.31E-37 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS16635 832f8902aad04b00d41621c1ad2aa01c 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 2.1E-21 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AL539_RS16635 832f8902aad04b00d41621c1ad2aa01c 181 Gene3D G3DSA:3.60.21.10 1 173 7.1E-28 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS16635 832f8902aad04b00d41621c1ad2aa01c 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 168 1.2E-27 T 29-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AL539_RS06575 7cf0ebe15f94746c5b9fbfe977e22693 311 Gene3D G3DSA:1.10.3470.10 3 288 8.8E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS06575 7cf0ebe15f94746c5b9fbfe977e22693 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 269 6.5E-28 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL539_RS00620 4535b7c683919e1e014e8dbb6da7301d 338 SUPERFAMILY SSF52833 166 269 4.04E-10 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS00620 4535b7c683919e1e014e8dbb6da7301d 338 Gene3D G3DSA:3.40.30.10 151 338 1.8E-9 T 29-03-2018 AL539_RS00620 4535b7c683919e1e014e8dbb6da7301d 338 TIGRFAM TIGR02740 TraF-like: TraF-like protein 33 280 2.0E-75 T 29-03-2018 IPR014111 Type IV conjugative transfer system protein TraF AL539_RS00620 4535b7c683919e1e014e8dbb6da7301d 338 Pfam PF13728 F plasmid transfer operon protein 43 270 1.2E-63 T 29-03-2018 AL539_RS15880 8b6a7bc43bc9282454d7266c75ac3040 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.3E-73 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL539_RS15880 8b6a7bc43bc9282454d7266c75ac3040 149 Pfam PF03477 ATP cone domain 50 136 1.1E-17 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL539_RS15880 8b6a7bc43bc9282454d7266c75ac3040 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.022 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL539_RS09755 2df040d9e64399264720987b426acae1 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 2.7E-51 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AL539_RS09755 2df040d9e64399264720987b426acae1 440 SUPERFAMILY SSF51735 6 170 6.17E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS09755 2df040d9e64399264720987b426acae1 440 Gene3D G3DSA:3.90.110.10 161 435 4.6E-92 T 29-03-2018 AL539_RS09755 2df040d9e64399264720987b426acae1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 7.3E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 7.3E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 7.3E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 7.3E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 7.3E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 7.3E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 7.3E-49 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 SUPERFAMILY SSF56327 173 436 2.89E-94 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL539_RS09755 2df040d9e64399264720987b426acae1 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 7.0E-63 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL539_RS09755 2df040d9e64399264720987b426acae1 440 Gene3D G3DSA:3.40.50.720 3 160 4.2E-29 T 29-03-2018 AL539_RS00085 0dcc5c76e33de655b771bfcadf107aab 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 80 6.2E-15 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AL539_RS00085 0dcc5c76e33de655b771bfcadf107aab 93 Pfam PF07178 TraL protein 5 91 1.3E-24 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AL539_RS08675 7c6a9d418d11428f62b8bfbf979e72d2 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS08675 7c6a9d418d11428f62b8bfbf979e72d2 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS08675 7c6a9d418d11428f62b8bfbf979e72d2 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS08675 7c6a9d418d11428f62b8bfbf979e72d2 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS08675 7c6a9d418d11428f62b8bfbf979e72d2 256 PIRSF PIRSF006648 6 253 2.6E-26 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AL539_RS08675 7c6a9d418d11428f62b8bfbf979e72d2 256 Pfam PF01061 ABC-2 type transporter 8 218 1.1E-38 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL539_RS09900 896d9741d731f8151d835c9461505963 162 Pfam PF02470 MlaD protein 39 118 1.0E-20 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS09900 896d9741d731f8151d835c9461505963 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.2E-54 T 29-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AL539_RS07240 d26ae630a3adaad0a4e19d778ae6542e 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 2.0E-55 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL539_RS22545 1f765bb399c8d1be9d1465b7c41fe42f 411 Pfam PF03616 Sodium/glutamate symporter 6 379 1.3E-151 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL539_RS22545 1f765bb399c8d1be9d1465b7c41fe42f 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 410 23.912 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL539_RS22545 1f765bb399c8d1be9d1465b7c41fe42f 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 10 410 1.0E-134 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL539_RS09875 8ed78f828348718e1c3dd6465c064bc8 241 Gene3D G3DSA:3.40.1130.10 31 241 6.2E-42 T 29-03-2018 AL539_RS09875 8ed78f828348718e1c3dd6465c064bc8 241 SUPERFAMILY SSF69593 4 235 1.18E-57 T 29-03-2018 AL539_RS09875 8ed78f828348718e1c3dd6465c064bc8 241 SMART SM00563 67 182 5.5E-41 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS09875 8ed78f828348718e1c3dd6465c064bc8 241 Pfam PF01553 Acyltransferase 58 180 3.8E-32 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AL539_RS09875 8ed78f828348718e1c3dd6465c064bc8 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.9E-44 T 29-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 Gene3D G3DSA:3.40.50.720 144 318 4.1E-22 T 29-03-2018 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 Gene3D G3DSA:3.50.50.60 2 137 2.9E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-38 T 29-03-2018 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-38 T 29-03-2018 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-38 T 29-03-2018 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-38 T 29-03-2018 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.1E-38 T 29-03-2018 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 SUPERFAMILY SSF51905 2 313 8.05E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.0E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.2E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02125 4767366400d540f89a4b6489c32738a7 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.2E-123 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AL539_RS13130 6cba8ff9117647f256b7671e6345011c 316 PIRSF PIRSF026649 6 312 1.7E-79 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS13130 6cba8ff9117647f256b7671e6345011c 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 308 3.0E-133 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL539_RS13130 6cba8ff9117647f256b7671e6345011c 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.793 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL539_RS13130 6cba8ff9117647f256b7671e6345011c 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 9.4E-72 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS15155 504a34e95116914d0c107fbbd07a9b44 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.014 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL539_RS15155 504a34e95116914d0c107fbbd07a9b44 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 3.7E-126 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL539_RS03780 184bf67ce32101f777b2d467622b77ee 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 5.4E-21 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL539_RS03780 184bf67ce32101f777b2d467622b77ee 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 51 4.2E-18 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL539_RS03955 840947d60c2802ed507289946f0b4322 478 SUPERFAMILY SSF53335 7 308 4.73E-63 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS03955 840947d60c2802ed507289946f0b4322 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 66.232 T 29-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 422 473 2.4E-10 T 29-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 4.3E-101 T 29-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 1.3E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 1.3E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 1.3E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 1.3E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 1.3E-27 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 5.8E-49 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 3.5E-29 T 29-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 Gene3D G3DSA:3.40.50.150 99 317 3.4E-56 T 29-03-2018 AL539_RS03955 840947d60c2802ed507289946f0b4322 478 Gene3D G3DSA:3.30.70.1170 28 98 4.4E-22 T 29-03-2018 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 1.1E-76 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 9.3E-36 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 9.3E-36 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 9.3E-36 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 9.3E-36 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 9.3E-36 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 9.3E-36 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS24920 b29d22bcac8b521b89f135a04df59430 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 9.3E-36 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL539_RS10855 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.2E-31 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL539_RS10855 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.2E-31 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL539_RS10855 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.2E-31 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL539_RS10855 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.2E-31 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL539_RS10855 5d96ab0c96d38716e70955947d2a39db 165 Pfam PF02308 MgtC family 19 141 4.3E-28 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL539_RS24535 b28357d906e1c658bf8536e54919b179 289 Gene3D G3DSA:3.40.50.1980 32 137 3.3E-21 T 29-03-2018 AL539_RS24535 b28357d906e1c658bf8536e54919b179 289 Gene3D G3DSA:3.40.50.1980 138 289 3.7E-31 T 29-03-2018 AL539_RS24535 b28357d906e1c658bf8536e54919b179 289 SUPERFAMILY SSF53807 33 289 2.59E-50 T 29-03-2018 AL539_RS24535 b28357d906e1c658bf8536e54919b179 289 Pfam PF01497 Periplasmic binding protein 35 264 3.3E-39 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL539_RS05600 8e04cee2d4d883636bf76e8d1b5e36da 179 SUPERFAMILY SSF111126 1 176 6.28E-52 T 29-03-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain AL539_RS05600 8e04cee2d4d883636bf76e8d1b5e36da 179 Gene3D G3DSA:3.90.1520.10 1 179 2.1E-42 T 29-03-2018 AL539_RS05600 8e04cee2d4d883636bf76e8d1b5e36da 179 Pfam PF07700 Haem-NO-binding 2 162 2.8E-39 T 29-03-2018 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 PIRSF PIRSF005784 3 188 6.5E-87 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 Gene3D G3DSA:3.30.70.20 146 192 5.9E-6 T 29-03-2018 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 Gene3D G3DSA:3.30.70.20 121 145 4.6E-10 T 29-03-2018 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 5.9E-18 T 29-03-2018 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 8.8E-87 T 29-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 SUPERFAMILY SSF54862 37 173 1.28E-30 T 29-03-2018 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 Gene3D G3DSA:3.30.70.20 25 120 1.4E-9 T 29-03-2018 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 43.116 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AL539_RS06700 4b4df2487bf35a9827937628b0e40622 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.1E-14 T 29-03-2018 IPR007202 4Fe-4S domain GO:0051536 AL539_RS04180 e3d7dbd4d142f32117adecea7e3d3ca8 300 PIRSF PIRSF037505 2 296 2.5E-11 T 29-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AL539_RS04180 e3d7dbd4d142f32117adecea7e3d3ca8 300 Pfam PF02574 Homocysteine S-methyltransferase 6 291 9.0E-51 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL539_RS04180 e3d7dbd4d142f32117adecea7e3d3ca8 300 SUPERFAMILY SSF82282 2 297 9.29E-72 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL539_RS04180 e3d7dbd4d142f32117adecea7e3d3ca8 300 Gene3D G3DSA:3.20.20.330 1 299 3.1E-65 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL539_RS06580 f3e0fc014ff4c569b6aaeed625669035 321 Gene3D G3DSA:3.40.50.2300 150 287 1.1E-17 T 29-03-2018 AL539_RS06580 f3e0fc014ff4c569b6aaeed625669035 321 SUPERFAMILY SSF53822 43 279 1.53E-18 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AL539_RS06580 f3e0fc014ff4c569b6aaeed625669035 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 2.5E-112 T 29-03-2018 IPR007487 ABC transporter, substrate-binding protein AL539_RS06580 f3e0fc014ff4c569b6aaeed625669035 321 Gene3D G3DSA:3.40.50.2300 26 149 1.1E-22 T 29-03-2018 AL539_RS05625 9b588ba83eaf10e05297bb7f837cbddb 155 SUPERFAMILY SSF55729 1 141 7.09E-16 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS05625 9b588ba83eaf10e05297bb7f837cbddb 155 Pfam PF00583 Acetyltransferase (GNAT) family 22 133 4.1E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS05625 9b588ba83eaf10e05297bb7f837cbddb 155 Gene3D G3DSA:3.40.630.30 1 154 1.8E-14 T 29-03-2018 AL539_RS02585 889f0a6c1faff0348c96efff98250ab2 222 Gene3D G3DSA:3.40.30.10 1 89 4.1E-24 T 29-03-2018 AL539_RS02585 889f0a6c1faff0348c96efff98250ab2 222 SUPERFAMILY SSF52833 4 89 1.56E-20 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS02585 889f0a6c1faff0348c96efff98250ab2 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 2.4E-79 T 29-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AL539_RS02585 889f0a6c1faff0348c96efff98250ab2 222 SUPERFAMILY SSF47616 88 220 6.96E-24 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AL539_RS02585 889f0a6c1faff0348c96efff98250ab2 222 Gene3D G3DSA:1.20.1050.10 90 222 1.2E-21 T 29-03-2018 AL539_RS02585 889f0a6c1faff0348c96efff98250ab2 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 3.7E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL539_RS19555 bd3db4a8dabea43989ade7d446f666e3 458 Gene3D G3DSA:3.90.226.10 14 227 2.7E-25 T 29-03-2018 AL539_RS19555 bd3db4a8dabea43989ade7d446f666e3 458 Gene3D G3DSA:2.40.50.140 383 458 2.2E-15 T 29-03-2018 AL539_RS19555 bd3db4a8dabea43989ade7d446f666e3 458 SUPERFAMILY SSF141322 386 451 3.4E-8 T 29-03-2018 AL539_RS19555 bd3db4a8dabea43989ade7d446f666e3 458 Pfam PF01957 NfeD-like C-terminal, partner-binding 314 453 6.8E-35 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain AL539_RS19555 bd3db4a8dabea43989ade7d446f666e3 458 SUPERFAMILY SSF52096 154 215 1.7E-27 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS19555 bd3db4a8dabea43989ade7d446f666e3 458 SUPERFAMILY SSF52096 5 127 1.7E-27 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS23160 de2feff4b647e7014e5e86416ace3d5b 239 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 192 2.9E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS23160 de2feff4b647e7014e5e86416ace3d5b 239 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 2.9E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS23160 de2feff4b647e7014e5e86416ace3d5b 239 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 74 2.9E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS23160 de2feff4b647e7014e5e86416ace3d5b 239 Gene3D G3DSA:3.40.50.1820 6 237 2.8E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23160 de2feff4b647e7014e5e86416ace3d5b 239 SUPERFAMILY SSF53474 7 233 5.5E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23160 de2feff4b647e7014e5e86416ace3d5b 239 Pfam PF12146 Serine aminopeptidase, S33 47 219 4.9E-12 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 Gene3D G3DSA:3.40.190.10 91 175 6.9E-24 T 29-03-2018 AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 Pfam PF03466 LysR substrate binding domain 89 287 8.5E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 Gene3D G3DSA:1.10.10.10 1 90 1.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 SUPERFAMILY SSF46785 1 85 4.03E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 Gene3D G3DSA:3.40.190.10 176 260 2.5E-15 T 29-03-2018 AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS02440 0879ead29091046eeb1007b1735c82aa 289 SUPERFAMILY SSF53850 90 288 1.18E-42 T 29-03-2018 AL539_RS21220 5e061109760701936f2a8a85d100f375 166 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 98 1.1E-13 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AL539_RS21220 5e061109760701936f2a8a85d100f375 166 SUPERFAMILY SSF53146 1 117 2.49E-20 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AL539_RS21220 5e061109760701936f2a8a85d100f375 166 Gene3D G3DSA:3.30.420.130 1 123 1.1E-17 T 29-03-2018 AL539_RS12225 7563458ab3c61051b4f3ce574939d81c 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 5.0E-24 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL539_RS12225 7563458ab3c61051b4f3ce574939d81c 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.437 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL539_RS12225 7563458ab3c61051b4f3ce574939d81c 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 82 5.6E-30 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL539_RS12225 7563458ab3c61051b4f3ce574939d81c 85 Pfam PF01809 Haemolytic domain 10 75 1.6E-28 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL539_RS12225 7563458ab3c61051b4f3ce574939d81c 85 SMART SM01234 8 75 1.9E-41 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AL539_RS15405 0ff2b1262dcc4d5ff3cd10f0ebd6b355 507 Pfam PF03553 Na+/H+ antiporter family 161 469 8.9E-51 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL539_RS23565 7a8a8ce51ba4fa234479ff3db586e84f 446 Pfam PF06123 Inner membrane protein CreD 9 429 5.0E-145 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AL539_RS23565 7a8a8ce51ba4fa234479ff3db586e84f 446 PIRSF PIRSF004548 1 440 4.8E-138 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AL539_RS07235 d89bee18a8e7d56ea4ca14643115880f 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 115 4.2E-31 T 29-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AL539_RS07235 d89bee18a8e7d56ea4ca14643115880f 404 Pfam PF14559 Tetratricopeptide repeat 176 244 3.1E-8 T 29-03-2018 AL539_RS07235 d89bee18a8e7d56ea4ca14643115880f 404 Gene3D G3DSA:1.25.40.10 151 298 1.9E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS07235 d89bee18a8e7d56ea4ca14643115880f 404 SUPERFAMILY SSF48452 161 265 9.8E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS19270 fd8d41a38a1216ede059533b181c78fc 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL539_RS19270 fd8d41a38a1216ede059533b181c78fc 141 Gene3D G3DSA:3.40.140.10 1 141 2.0E-31 T 29-03-2018 AL539_RS19270 fd8d41a38a1216ede059533b181c78fc 141 SUPERFAMILY SSF53927 2 137 4.43E-41 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL539_RS19270 fd8d41a38a1216ede059533b181c78fc 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 5.0E-18 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL539_RS07745 70662799bfbd4783121f85c675f52999 251 SUPERFAMILY SSF64005 9 234 9.02E-88 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL539_RS07745 70662799bfbd4783121f85c675f52999 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 3.2E-94 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL539_RS07745 70662799bfbd4783121f85c675f52999 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.741 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL539_RS07745 70662799bfbd4783121f85c675f52999 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.4E-80 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL539_RS07745 70662799bfbd4783121f85c675f52999 251 Gene3D G3DSA:3.40.1180.10 1 241 8.1E-92 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL539_RS07745 70662799bfbd4783121f85c675f52999 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 29-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 AL539_RS00760 0c359bd5a300ac2ec527621c343eacbc 395 Pfam PF01420 Type I restriction modification DNA specificity domain 16 184 1.1E-11 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS00760 0c359bd5a300ac2ec527621c343eacbc 395 Pfam PF01420 Type I restriction modification DNA specificity domain 216 366 2.4E-17 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS00760 0c359bd5a300ac2ec527621c343eacbc 395 SUPERFAMILY SSF116734 2 207 7.98E-42 T 29-03-2018 AL539_RS00760 0c359bd5a300ac2ec527621c343eacbc 395 Gene3D G3DSA:3.90.220.20 178 367 1.2E-29 T 29-03-2018 AL539_RS00760 0c359bd5a300ac2ec527621c343eacbc 395 Gene3D G3DSA:3.90.220.20 1 177 1.3E-28 T 29-03-2018 AL539_RS00760 0c359bd5a300ac2ec527621c343eacbc 395 SUPERFAMILY SSF116734 212 390 1.19E-35 T 29-03-2018 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 Pfam PF07690 Major Facilitator Superfamily 9 320 2.6E-41 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 PRINTS PR01035 Tetracycline resistance protein signature 98 119 2.5E-6 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 PRINTS PR01035 Tetracycline resistance protein signature 40 59 2.5E-6 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 PRINTS PR01035 Tetracycline resistance protein signature 158 178 2.5E-6 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 PRINTS PR01035 Tetracycline resistance protein signature 10 26 2.5E-6 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 Gene3D G3DSA:1.20.1250.20 194 390 3.5E-21 T 29-03-2018 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 Gene3D G3DSA:1.20.1250.20 3 193 2.8E-27 T 29-03-2018 AL539_RS04140 4edcc2b94c6514b06d4d89e212e5e6c2 393 SUPERFAMILY SSF103473 3 380 5.62E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS04960 a3325de94394d95d7dca28ec2269beb9 77 Gene3D G3DSA:3.30.420.10 1 77 1.6E-11 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS04960 a3325de94394d95d7dca28ec2269beb9 77 SUPERFAMILY SSF53098 8 74 1.4E-12 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS04960 a3325de94394d95d7dca28ec2269beb9 77 Pfam PF13333 Integrase core domain 23 77 3.6E-14 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AL539_RS23635 060386e9c57ba8a16a3ec59d7f40aec9 166 Pfam PF03748 Flagellar basal body-associated protein FliL 67 166 2.5E-14 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL539_RS23345 0c93af7e66634caabd1f9d2c9a7ce514 421 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 2.7E-14 T 29-03-2018 IPR014973 Protein of unknown function DUF1835 AL539_RS13490 b1d012196f7fbcac2381333e69a662ae 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.5E-87 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL539_RS13490 b1d012196f7fbcac2381333e69a662ae 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.029 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL539_RS13490 b1d012196f7fbcac2381333e69a662ae 183 Pfam PF00227 Proteasome subunit 2 169 1.4E-23 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL539_RS13490 b1d012196f7fbcac2381333e69a662ae 183 Gene3D G3DSA:3.60.20.10 2 174 1.0E-30 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS13490 b1d012196f7fbcac2381333e69a662ae 183 PIRSF PIRSF039093 1 175 2.9E-87 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL539_RS13490 b1d012196f7fbcac2381333e69a662ae 183 SUPERFAMILY SSF56235 2 172 1.02E-57 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS08560 8a8d1b73168df1945546db6f9f98843a 296 SUPERFAMILY SSF53067 1 111 4.67E-25 T 29-03-2018 AL539_RS08560 8a8d1b73168df1945546db6f9f98843a 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 7.5E-46 T 29-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AL539_RS08560 8a8d1b73168df1945546db6f9f98843a 296 Gene3D G3DSA:3.30.420.40 2 127 2.3E-19 T 29-03-2018 AL539_RS08560 8a8d1b73168df1945546db6f9f98843a 296 SUPERFAMILY SSF53067 114 283 5.55E-43 T 29-03-2018 AL539_RS08560 8a8d1b73168df1945546db6f9f98843a 296 Gene3D G3DSA:3.30.420.40 128 270 2.9E-28 T 29-03-2018 AL539_RS21780 4cdb0a53c46ab6939cdcc2746896f995 201 SUPERFAMILY SSF51197 14 198 2.06E-67 T 29-03-2018 AL539_RS21780 4cdb0a53c46ab6939cdcc2746896f995 201 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 196 1.6E-31 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL539_RS21780 4cdb0a53c46ab6939cdcc2746896f995 201 Gene3D G3DSA:2.60.120.590 10 201 8.4E-54 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL539_RS04300 057ee1c59573bff13f9782853f608add 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 9.8E-127 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL539_RS04300 057ee1c59573bff13f9782853f608add 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.511 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL539_RS04300 057ee1c59573bff13f9782853f608add 298 SUPERFAMILY SSF51621 5 294 1.48E-94 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS04300 057ee1c59573bff13f9782853f608add 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AL539_RS04300 057ee1c59573bff13f9782853f608add 298 Gene3D G3DSA:3.20.20.60 3 298 2.0E-83 T 29-03-2018 AL539_RS04300 057ee1c59573bff13f9782853f608add 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 259 7.4E-46 T 29-03-2018 AL539_RS25740 a5fe0005ac8e0a8fc258b68376837dd8 379 SUPERFAMILY SSF52096 18 197 9.75E-54 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS25740 a5fe0005ac8e0a8fc258b68376837dd8 379 SUPERFAMILY SSF52096 268 343 9.75E-54 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS25740 a5fe0005ac8e0a8fc258b68376837dd8 379 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 2.7E-104 T 29-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AL539_RS25740 a5fe0005ac8e0a8fc258b68376837dd8 379 Gene3D G3DSA:3.90.226.10 10 352 5.9E-67 T 29-03-2018 AL539_RS12500 93aa829d9bcf1c8868c0cf198604549a 316 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 73 2.6E-8 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_RS12500 93aa829d9bcf1c8868c0cf198604549a 316 Gene3D G3DSA:1.10.3720.10 23 303 2.4E-47 T 29-03-2018 AL539_RS12500 93aa829d9bcf1c8868c0cf198604549a 316 SUPERFAMILY SSF161098 97 298 4.84E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS12500 93aa829d9bcf1c8868c0cf198604549a 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 313 2.8E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS22960 209d18a64a72a507eeffba67dbbe3b09 286 SUPERFAMILY SSF46689 186 221 9.86E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS22960 209d18a64a72a507eeffba67dbbe3b09 286 SMART SM00342 187 271 4.0E-8 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22960 209d18a64a72a507eeffba67dbbe3b09 286 Pfam PF12833 Helix-turn-helix domain 193 272 1.8E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS22960 209d18a64a72a507eeffba67dbbe3b09 286 Gene3D G3DSA:1.10.10.60 223 274 3.2E-7 T 29-03-2018 AL539_RS22960 209d18a64a72a507eeffba67dbbe3b09 286 Gene3D G3DSA:1.10.10.60 139 222 1.1E-10 T 29-03-2018 AL539_RS05315 cab8cc3e8f0467044fbf45ad7f2e018d 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 5.3E-14 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 476 509 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 44 531 6.0E-153 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 Pfam PF03958 Bacterial type II/III secretion system short domain 192 296 2.6E-15 T 29-03-2018 IPR005644 NolW-like AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 383 402 2.4E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 509 528 2.4E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 417 432 2.4E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 204 221 2.4E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 299 319 2.4E-38 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL539_RS04535 7ad22e70229dbd6abe9af267899d4001 627 Pfam PF00263 Bacterial type II and III secretion system protein 370 530 2.3E-36 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 Gene3D G3DSA:3.40.30.10 29 181 4.0E-27 T 29-03-2018 AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 4.4E-12 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 4.4E-12 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 4.4E-12 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 SUPERFAMILY SSF52833 40 181 4.49E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 PIRSF PIRSF000303 2 181 6.6E-54 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL539_RS20665 e69d816efe2cfbc6dcb35022ebdbe0c6 181 Pfam PF00255 Glutathione peroxidase 40 134 3.7E-25 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL539_RS07095 b54b27a8268521fad77e16148cd8cd02 174 Pfam PF03358 NADPH-dependent FMN reductase 1 138 1.2E-26 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL539_RS07095 b54b27a8268521fad77e16148cd8cd02 174 Gene3D G3DSA:3.40.50.360 1 174 2.2E-29 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS07095 b54b27a8268521fad77e16148cd8cd02 174 SUPERFAMILY SSF52218 1 170 1.21E-35 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS18585 67aabb6ad8ed1b83239b3d3432d4b6ed 206 SUPERFAMILY SSF46565 103 206 2.22E-15 T 29-03-2018 IPR001623 DnaJ domain AL539_RS18585 67aabb6ad8ed1b83239b3d3432d4b6ed 206 Pfam PF00226 DnaJ domain 159 205 1.6E-11 T 29-03-2018 IPR001623 DnaJ domain AL539_RS18585 67aabb6ad8ed1b83239b3d3432d4b6ed 206 Gene3D G3DSA:1.10.287.110 112 206 2.7E-16 T 29-03-2018 IPR001623 DnaJ domain AL539_RS18585 67aabb6ad8ed1b83239b3d3432d4b6ed 206 SMART SM00271 153 206 3.3E-10 T 29-03-2018 IPR001623 DnaJ domain AL539_RS18585 67aabb6ad8ed1b83239b3d3432d4b6ed 206 Pfam PF12339 DNA-J related protein 17 138 2.0E-41 T 29-03-2018 IPR021059 DnaJ-related protein, N-terminal AL539_RS16430 e5ba7d99ba6ae116ab9a9f17fbf09426 141 Gene3D G3DSA:1.20.58.300 1 113 1.0E-15 T 29-03-2018 AL539_RS16430 e5ba7d99ba6ae116ab9a9f17fbf09426 141 Pfam PF05130 FlgN protein 2 131 2.2E-25 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL539_RS16430 e5ba7d99ba6ae116ab9a9f17fbf09426 141 SUPERFAMILY SSF140566 1 113 4.32E-23 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL539_RS12095 54e9d68dc2194d6b05c0ca53be3280b5 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 29-03-2018 AL539_RS12095 54e9d68dc2194d6b05c0ca53be3280b5 94 Pfam PF13710 ACT domain 12 73 3.1E-21 T 29-03-2018 AL539_RS12095 54e9d68dc2194d6b05c0ca53be3280b5 94 Gene3D G3DSA:3.30.70.260 1 91 1.2E-9 T 29-03-2018 AL539_RS12095 54e9d68dc2194d6b05c0ca53be3280b5 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 29-03-2018 AL539_RS04795 67378f4d53daf42fb7de688515be13d5 95 SUPERFAMILY SSF143120 1 34 2.49E-5 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_RS04795 67378f4d53daf42fb7de688515be13d5 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 89 1.3E-7 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_RS04795 67378f4d53daf42fb7de688515be13d5 95 Gene3D G3DSA:3.40.1620.10 1 34 9.4E-6 T 29-03-2018 AL539_RS13940 9441843897ecb12962af78bd252d0e90 266 Pfam PF06738 Putative threonine/serine exporter 21 258 3.8E-67 T 29-03-2018 IPR010619 Putative threonine/serine exporter AL539_RS00225 32819bab89916c214441b1e960ad914e 251 Pfam PF02589 LUD domain 69 248 1.2E-27 T 29-03-2018 IPR003741 LUD domain AL539_RS00225 32819bab89916c214441b1e960ad914e 251 SUPERFAMILY SSF100950 129 249 1.13E-32 T 29-03-2018 AL539_RS00225 32819bab89916c214441b1e960ad914e 251 SUPERFAMILY SSF100950 67 96 1.13E-32 T 29-03-2018 AL539_RS00225 32819bab89916c214441b1e960ad914e 251 Gene3D G3DSA:3.40.50.10420 50 249 1.1E-35 T 29-03-2018 AL539_RS08810 5d0eb231780a7e76ec96f0cce63aeb0f 203 Gene3D G3DSA:1.10.530.10 37 200 7.3E-18 T 29-03-2018 AL539_RS08810 5d0eb231780a7e76ec96f0cce63aeb0f 203 SUPERFAMILY SSF53955 17 166 6.65E-22 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS22580 72f3dfd9207f5d961d8a8ef8fa7158bf 263 Gene3D G3DSA:3.40.50.2300 5 148 9.9E-30 T 29-03-2018 AL539_RS22580 72f3dfd9207f5d961d8a8ef8fa7158bf 263 SMART SM00850 164 263 7.5E-20 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL539_RS22580 72f3dfd9207f5d961d8a8ef8fa7158bf 263 Pfam PF04397 LytTr DNA-binding domain 165 262 2.2E-25 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL539_RS22580 72f3dfd9207f5d961d8a8ef8fa7158bf 263 SMART SM00448 5 117 2.3E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22580 72f3dfd9207f5d961d8a8ef8fa7158bf 263 SUPERFAMILY SSF52172 4 156 4.7E-31 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS22580 72f3dfd9207f5d961d8a8ef8fa7158bf 263 Pfam PF00072 Response regulator receiver domain 8 116 6.9E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS22580 72f3dfd9207f5d961d8a8ef8fa7158bf 263 Gene3D G3DSA:2.40.50.40 155 227 1.5E-13 T 29-03-2018 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 SUPERFAMILY SSF52540 4 169 6.92E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 29-03-2018 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 29-03-2018 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 29-03-2018 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 29-03-2018 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 29-03-2018 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 Gene3D G3DSA:3.40.50.300 1 172 8.4E-37 T 29-03-2018 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 Pfam PF01202 Shikimate kinase 13 169 1.5E-57 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL539_RS10280 6ffdba2debfc527604d0c738c96220dd 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.116 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL539_RS14880 b0b2d4d314b1601b6a72ad20121cc72b 226 SUPERFAMILY SSF52980 2 220 1.55E-80 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS14880 b0b2d4d314b1601b6a72ad20121cc72b 226 Gene3D G3DSA:3.40.600.10 2 223 2.1E-57 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL539_RS14880 b0b2d4d314b1601b6a72ad20121cc72b 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 7.4E-101 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL539_RS14880 b0b2d4d314b1601b6a72ad20121cc72b 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 7.3E-34 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL539_RS14880 b0b2d4d314b1601b6a72ad20121cc72b 226 SMART SM00927 53 151 2.1E-64 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL539_RS14880 b0b2d4d314b1601b6a72ad20121cc72b 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 147.866 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL539_RS09925 bc4e461a634b4ac01423e4ab0a99c2c9 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.5E-46 T 29-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AL539_RS09925 bc4e461a634b4ac01423e4ab0a99c2c9 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 1.4E-48 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL539_RS09925 bc4e461a634b4ac01423e4ab0a99c2c9 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.873 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL539_RS09925 bc4e461a634b4ac01423e4ab0a99c2c9 187 Gene3D G3DSA:2.60.450.10 86 185 2.6E-7 T 29-03-2018 AL539_RS09925 bc4e461a634b4ac01423e4ab0a99c2c9 187 PIRSF PIRSF028513 2 185 1.6E-30 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL539_RS11365 35fe7c626b5988d86c048765590e0556 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 6.0E-59 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 AL539_RS11365 35fe7c626b5988d86c048765590e0556 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 114 2.2E-50 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 AL539_RS12530 9ee5c3026ee376dcf72f42928aafd998 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 6.8E-19 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL539_RS12530 9ee5c3026ee376dcf72f42928aafd998 109 SUPERFAMILY SSF103481 12 107 5.89E-15 T 29-03-2018 AL539_RS11820 19e86cb701b1da102e4b6f074beac803 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.834 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL539_RS11820 19e86cb701b1da102e4b6f074beac803 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 6.7E-29 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL539_RS11820 19e86cb701b1da102e4b6f074beac803 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 1.2E-23 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL539_RS25805 05c9daae2230f3143f9efe9395edb04b 533 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 43 521 1.4E-142 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS00505 83c839fca01a4e8af51862c4cb24e63f 524 Gene3D G3DSA:3.40.190.10 1 458 5.5E-5 T 29-03-2018 AL539_RS14080 1c0e30287b6b0b2b36f3670374eb67f7 273 Pfam PF08721 TnsA endonuclease C terminal 164 243 1.1E-9 T 29-03-2018 IPR014832 TnsA endonuclease C-terminal AL539_RS14080 1c0e30287b6b0b2b36f3670374eb67f7 273 SUPERFAMILY SSF46785 193 257 9.52E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14080 1c0e30287b6b0b2b36f3670374eb67f7 273 SUPERFAMILY SSF52980 10 165 2.41E-43 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL539_RS14080 1c0e30287b6b0b2b36f3670374eb67f7 273 Gene3D G3DSA:3.40.1350.10 8 165 4.4E-40 T 29-03-2018 AL539_RS14080 1c0e30287b6b0b2b36f3670374eb67f7 273 Pfam PF08722 TnsA endonuclease N terminal 74 162 1.7E-20 T 29-03-2018 IPR014833 TnsA endonuclease, N-terminal AL539_RS14080 1c0e30287b6b0b2b36f3670374eb67f7 273 Gene3D G3DSA:1.10.10.10 169 259 1.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24865 cbb442df0c8197c73a6e02e539dbc2dc 121 Gene3D G3DSA:1.10.10.10 29 120 4.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24865 cbb442df0c8197c73a6e02e539dbc2dc 121 Pfam PF01638 HxlR-like helix-turn-helix 31 116 4.4E-24 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type AL539_RS24865 cbb442df0c8197c73a6e02e539dbc2dc 121 SUPERFAMILY SSF46785 17 119 6.99E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS09805 e8f488905c29c09af1a8ff37a60c1483 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 4.1E-118 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AL539_RS09805 e8f488905c29c09af1a8ff37a60c1483 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 6.4E-70 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-41 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 3.9E-26 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 Gene3D G3DSA:1.20.1330.10 44 339 1.3E-69 T 29-03-2018 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 SUPERFAMILY SSF64518 1 375 3.53E-95 T 29-03-2018 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS07455 0a26b900f32912a58091ee9577aec960 376 Pfam PF07196 Flagellin hook IN motif 199 247 1.3E-9 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS01580 f5dd67df0e914e2a8a84b4414cfc6e2b 177 Pfam PF12915 Protein of unknown function (DUF3833) 15 175 1.2E-64 T 29-03-2018 IPR024409 Protein of unknown function DUF3833 AL539_RS01785 767ca4ff2e2c8090bce0a9087977b63b 539 SUPERFAMILY SSF53850 35 535 1.99E-129 T 29-03-2018 AL539_RS01785 767ca4ff2e2c8090bce0a9087977b63b 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 455 6.8E-83 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AL539_RS01785 767ca4ff2e2c8090bce0a9087977b63b 539 Gene3D G3DSA:3.10.105.10 303 509 8.8E-54 T 29-03-2018 AL539_RS01785 767ca4ff2e2c8090bce0a9087977b63b 539 PIRSF PIRSF002741 4 538 1.0E-90 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL539_RS01785 767ca4ff2e2c8090bce0a9087977b63b 539 Gene3D G3DSA:3.90.76.10 41 206 5.1E-33 T 29-03-2018 AL539_RS01785 767ca4ff2e2c8090bce0a9087977b63b 539 Gene3D G3DSA:3.40.190.10 207 302 3.7E-22 T 29-03-2018 AL539_RS04555 dc0883200dda9d28eaaf47cf4f727b47 137 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 127 1.5E-9 T 29-03-2018 AL539_RS04555 dc0883200dda9d28eaaf47cf4f727b47 137 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 9 134 7.3E-32 T 29-03-2018 IPR013400 Type III secretion system chaperone, YscW AL539_RS08015 f0978a44f361ad7dca58c36715e8db53 198 SUPERFAMILY SSF88697 3 189 4.97E-46 T 29-03-2018 IPR015947 PUA-like domain AL539_RS08015 f0978a44f361ad7dca58c36715e8db53 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 117 7.7E-16 T 29-03-2018 IPR003111 Lon, substrate-binding domain AL539_RS08015 f0978a44f361ad7dca58c36715e8db53 198 Gene3D G3DSA:2.30.130.40 1 111 1.3E-23 T 29-03-2018 AL539_RS08015 f0978a44f361ad7dca58c36715e8db53 198 SMART SM00464 3 190 0.0063 T 29-03-2018 IPR003111 Lon, substrate-binding domain AL539_RS13925 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13925 f8e2fa0ab0d904fabfdeaf7445fc8729 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13925 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13925 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.0E-40 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13925 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 29-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 SUPERFAMILY SSF46689 245 292 5.38E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 SUPERFAMILY SSF46689 193 243 1.27E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 Pfam PF12833 Helix-turn-helix domain 215 292 7.1E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 2.7E-36 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 Gene3D G3DSA:1.10.10.60 188 245 3.4E-13 T 29-03-2018 AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 Gene3D G3DSA:1.10.10.60 246 292 5.1E-12 T 29-03-2018 AL539_RS18780 8e524332851403fcd03c5e65e81f0cc5 293 SMART SM00342 209 292 6.2E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS23500 18505f848f5999a82ad678273da1ee48 296 Gene3D G3DSA:2.40.50.100 42 149 1.4E-14 T 29-03-2018 AL539_RS23500 18505f848f5999a82ad678273da1ee48 296 SUPERFAMILY SSF111369 42 242 6.67E-22 T 29-03-2018 AL539_RS23500 18505f848f5999a82ad678273da1ee48 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 233 3.0E-28 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS23500 18505f848f5999a82ad678273da1ee48 296 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 235 3.7E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS23500 18505f848f5999a82ad678273da1ee48 296 Gene3D G3DSA:2.40.50.100 150 251 0.0013 T 29-03-2018 AL539_RS15210 aed0a466ae1cc1ba4af186085ef453ef 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 6.3E-118 T 29-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AL539_RS15210 aed0a466ae1cc1ba4af186085ef453ef 258 PIRSF PIRSF028756 1 258 9.9E-135 T 29-03-2018 IPR016898 Polyphosphate kinase 2 AL539_RS15210 aed0a466ae1cc1ba4af186085ef453ef 258 Gene3D G3DSA:3.40.50.300 1 251 1.9E-107 T 29-03-2018 AL539_RS15210 aed0a466ae1cc1ba4af186085ef453ef 258 SUPERFAMILY SSF52540 35 223 1.46E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15210 aed0a466ae1cc1ba4af186085ef453ef 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 227 3.9E-114 T 29-03-2018 IPR022488 Polyphosphate kinase-2-related AL539_RS23820 90112eda3525e9b22188d42e7ba2d414 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 3.1E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS23820 90112eda3525e9b22188d42e7ba2d414 457 Gene3D G3DSA:3.30.565.10 315 454 1.6E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS23820 90112eda3525e9b22188d42e7ba2d414 457 SUPERFAMILY SSF55874 310 440 6.57E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_RS23820 90112eda3525e9b22188d42e7ba2d414 457 SMART SM00388 257 320 3.4E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS23820 90112eda3525e9b22188d42e7ba2d414 457 SUPERFAMILY SSF47384 240 319 2.75E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL539_RS23820 90112eda3525e9b22188d42e7ba2d414 457 Gene3D G3DSA:1.10.287.130 240 314 7.8E-8 T 29-03-2018 AL539_RS23450 b917fb527063aaed072aab00df4b8d21 217 Gene3D G3DSA:3.40.109.10 1 217 1.8E-38 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS23450 b917fb527063aaed072aab00df4b8d21 217 SUPERFAMILY SSF55469 1 216 3.27E-66 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL539_RS23450 b917fb527063aaed072aab00df4b8d21 217 Pfam PF00881 Nitroreductase family 8 193 7.6E-27 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL539_RS22685 3aa334c8c0f41773f66d72def1f8a55c 559 Gene3D G3DSA:2.160.20.70 260 481 1.4E-7 T 29-03-2018 AL539_RS22685 3aa334c8c0f41773f66d72def1f8a55c 559 Pfam PF03961 Flagellar Assembly Protein A 81 545 7.7E-126 T 29-03-2018 IPR005646 Flagellar assembly protein A AL539_RS15865 937c815bc5fcbd5c81b258cdb74828e9 129 Pfam PF07417 Transcriptional regulator Crl 6 123 9.7E-50 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AL539_RS15865 937c815bc5fcbd5c81b258cdb74828e9 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 31.701 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AL539_RS15675 694867c43e82d65b28270fbaa1209ea3 422 Pfam PF02384 N-6 DNA Methylase 106 389 1.5E-31 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL539_RS15675 694867c43e82d65b28270fbaa1209ea3 422 SUPERFAMILY SSF53335 5 421 3.45E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS15675 694867c43e82d65b28270fbaa1209ea3 422 Gene3D G3DSA:3.40.50.150 57 385 5.5E-29 T 29-03-2018 AL539_RS21210 93465b8071fb98a38af247ba653e80a1 288 SUPERFAMILY SSF56112 22 223 4.93E-19 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS21210 93465b8071fb98a38af247ba653e80a1 288 Gene3D G3DSA:1.10.510.10 55 280 8.1E-10 T 29-03-2018 AL539_RS21210 93465b8071fb98a38af247ba653e80a1 288 Pfam PF01636 Phosphotransferase enzyme family 35 210 2.7E-9 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AL539_RS05090 fe00e1be5a629e4080583e7cd7414e81 85 Gene3D G3DSA:3.30.2020.10 2 82 2.3E-12 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 AL539_RS05090 fe00e1be5a629e4080583e7cd7414e81 85 Pfam PF10387 Protein of unknown function (DUF2442) 6 78 2.1E-8 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 AL539_RS05090 fe00e1be5a629e4080583e7cd7414e81 85 SUPERFAMILY SSF143880 4 67 1.7E-6 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 AL539_RS14460 6818b8d93e623c6dcb8672b0891182a1 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 52.957 T 29-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AL539_RS14460 6818b8d93e623c6dcb8672b0891182a1 367 SUPERFAMILY SSF52540 60 198 6.26E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14460 6818b8d93e623c6dcb8672b0891182a1 367 Pfam PF03969 AFG1-like ATPase 1 364 8.3E-154 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AL539_RS14460 6818b8d93e623c6dcb8672b0891182a1 367 Gene3D G3DSA:3.40.50.300 18 363 2.2E-14 T 29-03-2018 AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 SUPERFAMILY SSF48498 87 192 8.12E-16 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 1.6E-32 T 29-03-2018 AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 97.116 T 29-03-2018 IPR017757 Transcriptional repressor BetI AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.5E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 Gene3D G3DSA:1.10.357.10 6 191 7.9E-26 T 29-03-2018 AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 SUPERFAMILY SSF46689 4 80 9.23E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS19600 0887420b080058e8d327f8293b204e3d 199 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 9.6E-76 T 29-03-2018 IPR017757 Transcriptional repressor BetI AL539_RS02130 bf9a1e21de76d0ba62e2ce7cf8410cc8 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 3.7E-54 T 29-03-2018 IPR018724 2OG-Fe dioxygenase AL539_RS04540 f7d524fb14889ece693ecd0e6adc59c1 142 Gene3D G3DSA:3.30.1460.10 1 139 2.6E-19 T 29-03-2018 AL539_RS04540 f7d524fb14889ece693ecd0e6adc59c1 142 SUPERFAMILY SSF69635 3 127 4.32E-48 T 29-03-2018 AL539_RS04540 f7d524fb14889ece693ecd0e6adc59c1 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 121 5.5E-19 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL539_RS04540 f7d524fb14889ece693ecd0e6adc59c1 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 3.1E-47 T 29-03-2018 IPR013353 Type III secretion system chaperone YscB AL539_RS20570 9a202893d98763eea10a076d0505954f 218 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 21 162 9.2E-41 T 29-03-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AL539_RS20570 9a202893d98763eea10a076d0505954f 218 Gene3D G3DSA:2.30.110.10 1 182 5.5E-36 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS20570 9a202893d98763eea10a076d0505954f 218 SUPERFAMILY SSF50475 2 184 8.64E-54 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AL539_RS13050 ab069418d330fb7fdf7a9d5526521df0 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 4.1E-32 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL539_RS24595 8d0d9e721e51ded62cec71e1d5bb7c5a 282 Gene3D G3DSA:3.40.50.300 13 280 2.3E-67 T 29-03-2018 AL539_RS24595 8d0d9e721e51ded62cec71e1d5bb7c5a 282 Pfam PF00005 ABC transporter 51 190 3.5E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS24595 8d0d9e721e51ded62cec71e1d5bb7c5a 282 SUPERFAMILY SSF52540 35 262 2.66E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24595 8d0d9e721e51ded62cec71e1d5bb7c5a 282 SMART SM00382 49 238 3.5E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS24595 8d0d9e721e51ded62cec71e1d5bb7c5a 282 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS13055 94a392e5b8b598b857ba4347def8c5d5 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 51 168 1.2E-20 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS15505 41ba4af8cec247abc99bbbe50c523675 191 Pfam PF11140 Protein of unknown function (DUF2913) 6 184 9.1E-22 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 AL539_RS03875 9819af2fa03b15dd68908ef7e28264c8 577 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 558 577 0.001 T 29-03-2018 IPR020008 GlyGly-CTERM domain AL539_RS03875 9819af2fa03b15dd68908ef7e28264c8 577 Pfam PF11949 Protein of unknown function (DUF3466) 5 208 3.1E-7 T 29-03-2018 IPR022562 Protein of unknown function DUF3466 AL539_RS03875 9819af2fa03b15dd68908ef7e28264c8 577 Pfam PF11949 Protein of unknown function (DUF3466) 254 577 1.4E-53 T 29-03-2018 IPR022562 Protein of unknown function DUF3466 AL539_RS10950 2ab8cd2630b4001f67a60fb68fdbf0f7 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 9.9E-258 T 29-03-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AL539_RS10950 2ab8cd2630b4001f67a60fb68fdbf0f7 575 Pfam PF00474 Sodium:solute symporter family 375 491 2.1E-15 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS10950 2ab8cd2630b4001f67a60fb68fdbf0f7 575 Pfam PF00474 Sodium:solute symporter family 33 296 1.5E-36 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS03425 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 Gene3D G3DSA:3.30.200.20 1 92 4.6E-20 T 29-03-2018 AL539_RS03425 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 Gene3D G3DSA:3.90.1200.10 93 281 8.9E-14 T 29-03-2018 AL539_RS03425 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 PIRSF PIRSF006221 1 288 3.0E-105 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL539_RS03425 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 SUPERFAMILY SSF56112 4 282 3.23E-41 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS03425 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 Pfam PF03881 Fructosamine kinase 1 286 4.5E-124 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 SUPERFAMILY SSF52540 459 693 1.09E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 Pfam PF00664 ABC transporter transmembrane region 158 417 5.7E-21 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 Gene3D G3DSA:3.40.50.300 466 699 1.2E-64 T 29-03-2018 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 Gene3D G3DSA:3.90.70.10 1 126 2.7E-14 T 29-03-2018 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.6E-295 T 29-03-2018 IPR017750 ATPase, type I secretion system AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 SUPERFAMILY SSF90123 142 452 4.84E-50 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 Pfam PF00005 ABC transporter 487 635 2.0E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 Gene3D G3DSA:1.20.1560.10 137 457 8.8E-30 T 29-03-2018 AL539_RS22755 d54dfaca0433deed9e489a46c4f76ac7 704 SMART SM00382 495 681 2.1E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS14490 01bdfb08a6943bd2fd8a762ceac023e5 245 Gene3D G3DSA:1.20.5.100 214 244 3.3E-14 T 29-03-2018 AL539_RS14490 01bdfb08a6943bd2fd8a762ceac023e5 245 SUPERFAMILY SSF46626 16 208 1.58E-49 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS14490 01bdfb08a6943bd2fd8a762ceac023e5 245 Gene3D G3DSA:1.10.760.10 26 210 4.2E-54 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS14490 01bdfb08a6943bd2fd8a762ceac023e5 245 Pfam PF02167 Cytochrome C1 family 33 244 2.8E-16 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL539_RS01760 11d7b6a70a9f8ff6947e0692ab95301d 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 7.6E-37 T 29-03-2018 IPR021284 Protein of unknown function DUF2750 AL539_RS12420 b7cbb5e4522e54131cd9ad21f7524d1e 83 Gene3D G3DSA:3.90.20.10 4 53 0.26 T 29-03-2018 AL539_RS12420 b7cbb5e4522e54131cd9ad21f7524d1e 83 Gene3D G3DSA:3.90.20.10 54 83 0.37 T 29-03-2018 AL539_RS12420 b7cbb5e4522e54131cd9ad21f7524d1e 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.5E-27 T 29-03-2018 IPR007475 Membrane fusogenic activity AL539_RS02930 172f4e46bf7802add763f0fc94f8561b 649 SUPERFAMILY SSF53649 283 597 8.37E-70 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS02930 172f4e46bf7802add763f0fc94f8561b 649 Gene3D G3DSA:3.40.720.10 274 560 4.1E-56 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS02930 172f4e46bf7802add763f0fc94f8561b 649 Pfam PF00884 Sulfatase 285 555 3.9E-51 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AL539_RS02930 172f4e46bf7802add763f0fc94f8561b 649 PIRSF PIRSF005091 15 648 1.9E-102 T 29-03-2018 IPR012160 Lipoteichoic acid synthase-like AL539_RS13855 f7e0e56014f25ebfe80b96d09b290a20 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 1.3E-142 T 29-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 AL539_RS13855 f7e0e56014f25ebfe80b96d09b290a20 330 Gene3D G3DSA:3.40.190.10 143 288 5.0E-23 T 29-03-2018 AL539_RS13855 f7e0e56014f25ebfe80b96d09b290a20 330 Gene3D G3DSA:3.40.190.10 11 142 4.1E-13 T 29-03-2018 AL539_RS13855 f7e0e56014f25ebfe80b96d09b290a20 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 6.4E-144 T 29-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AL539_RS13855 f7e0e56014f25ebfe80b96d09b290a20 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 5.5E-21 T 29-03-2018 AL539_RS13855 f7e0e56014f25ebfe80b96d09b290a20 330 SUPERFAMILY SSF53850 24 325 4.91E-67 T 29-03-2018 AL539_RS03480 79a5d942aa4d9db34f946469c4f7a63f 249 Pfam PF03942 DTW domain 30 221 3.4E-40 T 29-03-2018 IPR005636 DTW AL539_RS03480 79a5d942aa4d9db34f946469c4f7a63f 249 SMART SM01144 27 227 6.6E-63 T 29-03-2018 IPR005636 DTW AL539_RS05730 4bb9fd55f77631d8e8693ee5fcc7bb82 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 5.2E-61 T 29-03-2018 IPR021367 Protein of unknown function DUF2982 AL539_RS24685 73dbc7d66ec968925e03533896fda5e4 76 Pfam PF09016 Pas factor saposin fold 1 76 1.4E-45 T 29-03-2018 IPR015106 Pas factor saposin domain AL539_RS22310 b31de399bc369a7e413e90d86cae14c9 103 SUPERFAMILY SSF51182 2 102 9.19E-19 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS22310 b31de399bc369a7e413e90d86cae14c9 103 Pfam PF07883 Cupin domain 42 101 7.1E-11 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AL539_RS22310 b31de399bc369a7e413e90d86cae14c9 103 Gene3D G3DSA:2.60.120.10 13 103 4.4E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS06410 429d5288844a8a3cdb455f5664daa2bb 271 Gene3D G3DSA:3.20.10.10 121 269 1.6E-35 T 29-03-2018 AL539_RS06410 429d5288844a8a3cdb455f5664daa2bb 271 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL539_RS06410 429d5288844a8a3cdb455f5664daa2bb 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 266 3.8E-101 T 29-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AL539_RS06410 429d5288844a8a3cdb455f5664daa2bb 271 Pfam PF01063 Amino-transferase class IV 26 247 5.3E-45 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL539_RS06410 429d5288844a8a3cdb455f5664daa2bb 271 SUPERFAMILY SSF56752 1 266 6.8E-66 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AL539_RS06410 429d5288844a8a3cdb455f5664daa2bb 271 Gene3D G3DSA:3.30.470.10 1 109 1.7E-19 T 29-03-2018 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 SUPERFAMILY SSF64518 1 376 3.79E-96 T 29-03-2018 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 8.3E-26 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.1E-11 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.3E-42 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 Gene3D G3DSA:1.20.1330.10 40 349 1.2E-69 T 29-03-2018 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS07460 4e86d9dfa9a3e95342bdf48012fb03df 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL539_RS15940 0c861a26d5522f0d8a97b303e57048c8 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain AL539_RS15940 0c861a26d5522f0d8a97b303e57048c8 315 SUPERFAMILY SSF103088 183 300 3.66E-30 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS15940 0c861a26d5522f0d8a97b303e57048c8 315 Gene3D G3DSA:3.30.1330.60 132 311 5.2E-39 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS15940 0c861a26d5522f0d8a97b303e57048c8 315 Pfam PF00691 OmpA family 196 294 6.5E-17 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS13440 e87ab6fb98fcadbb2e07ae2b88471030 168 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.694 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL539_RS13440 e87ab6fb98fcadbb2e07ae2b88471030 168 SUPERFAMILY SSF89562 2 158 3.92E-47 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL539_RS13440 e87ab6fb98fcadbb2e07ae2b88471030 168 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 5.7E-68 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL539_RS13440 e87ab6fb98fcadbb2e07ae2b88471030 168 Pfam PF03737 Aldolase/RraA 6 152 1.7E-39 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL539_RS13440 e87ab6fb98fcadbb2e07ae2b88471030 168 Gene3D G3DSA:3.50.30.40 1 163 5.7E-40 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL539_RS13440 e87ab6fb98fcadbb2e07ae2b88471030 168 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 4.0E-82 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL539_RS21815 6916a957f535802b022be6aa883b44b2 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.335 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS21815 6916a957f535802b022be6aa883b44b2 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 2.9E-177 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS21815 6916a957f535802b022be6aa883b44b2 414 Pfam PF03116 NQR2, RnfD, RnfE family 44 404 3.5E-105 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AL539_RS21815 6916a957f535802b022be6aa883b44b2 414 PIRSF PIRSF016055 1 412 4.3E-186 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL539_RS21965 7067ed09ae5796a44225bfced7c933d4 291 Gene3D G3DSA:1.10.3470.10 8 289 6.9E-26 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS21965 7067ed09ae5796a44225bfced7c933d4 291 Pfam PF00950 ABC 3 transport family 22 285 2.7E-55 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL539_RS21965 7067ed09ae5796a44225bfced7c933d4 291 SUPERFAMILY SSF81345 15 281 4.32E-34 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS21520 f52902fc6fdbcd4b5436149194aacc7c 456 Pfam PF03315 Serine dehydratase beta chain 3 153 5.6E-53 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL539_RS21520 f52902fc6fdbcd4b5436149194aacc7c 456 Gene3D G3DSA:3.30.1330.90 10 156 8.6E-51 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL539_RS21520 f52902fc6fdbcd4b5436149194aacc7c 456 Gene3D G3DSA:1.10.4100.10 265 431 8.6E-30 T 29-03-2018 AL539_RS21520 f52902fc6fdbcd4b5436149194aacc7c 456 SUPERFAMILY SSF143548 16 155 3.66E-44 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AL539_RS21520 f52902fc6fdbcd4b5436149194aacc7c 456 Pfam PF03313 Serine dehydratase alpha chain 190 447 1.5E-94 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AL539_RS21520 f52902fc6fdbcd4b5436149194aacc7c 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 3.0E-199 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 Pfam PF00462 Glutaredoxin 173 231 1.8E-18 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 SUPERFAMILY SSF52833 3 241 1.2E-48 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 Gene3D G3DSA:3.40.30.10 3 159 1.4E-29 T 29-03-2018 AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.6E-14 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.6E-14 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.6E-14 T 29-03-2018 IPR014025 Glutaredoxin subgroup AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 Gene3D G3DSA:3.40.30.10 160 241 1.3E-20 T 29-03-2018 AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 Pfam PF08534 Redoxin 5 160 1.7E-33 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL539_RS10320 803a7f8249db3ce0e806e3d464120881 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 3.2E-42 T 29-03-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 AL539_RS25055 74cbfb2c8d2aeb1eaec3334c04b2039a 179 PIRSF PIRSF005413 1 178 5.1E-67 T 29-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25055 74cbfb2c8d2aeb1eaec3334c04b2039a 179 Gene3D G3DSA:2.60.370.10 56 176 2.4E-44 T 29-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25055 74cbfb2c8d2aeb1eaec3334c04b2039a 179 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 8.6E-50 T 29-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS25055 74cbfb2c8d2aeb1eaec3334c04b2039a 179 SUPERFAMILY SSF110111 55 174 2.88E-47 T 29-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS14870 ffe371d16f1427f3cf789ae2e5d27bd2 344 SUPERFAMILY SSF51430 1 344 9.69E-110 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS14870 ffe371d16f1427f3cf789ae2e5d27bd2 344 Pfam PF00248 Aldo/keto reductase family 15 335 1.3E-75 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS14870 ffe371d16f1427f3cf789ae2e5d27bd2 344 Gene3D G3DSA:3.20.20.100 1 344 5.4E-97 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AL539_RS10270 f483312694d63029f43850672fe9f50f 503 Pfam PF13401 AAA domain 27 128 1.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS10270 f483312694d63029f43850672fe9f50f 503 SUPERFAMILY SSF52540 15 221 2.54E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS10270 f483312694d63029f43850672fe9f50f 503 Pfam PF05036 Sporulation related domain 416 489 1.4E-6 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS00785 390a2e084cca0753650c9f21e8f0c71f 258 Pfam PF01863 Protein of unknown function DUF45 38 249 9.5E-57 T 29-03-2018 IPR002725 Protein of unknown function DUF45 AL539_RS03810 9692e65534e049905e62b3574dbec342 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 3.2E-230 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL539_RS03810 9692e65534e049905e62b3574dbec342 477 Gene3D G3DSA:1.20.210.10 6 473 1.1E-93 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS03810 9692e65534e049905e62b3574dbec342 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS03810 9692e65534e049905e62b3574dbec342 477 SUPERFAMILY SSF81442 13 467 3.01E-121 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS03810 9692e65534e049905e62b3574dbec342 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 2.9E-115 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS15915 56fab36341e977daf61a7ac1177f4d04 168 SUPERFAMILY SSF101307 9 161 1.29E-48 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL539_RS15915 56fab36341e977daf61a7ac1177f4d04 168 PIRSF PIRSF006162 6 167 1.7E-54 T 29-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL539_RS15915 56fab36341e977daf61a7ac1177f4d04 168 Gene3D G3DSA:1.10.3760.10 45 167 3.5E-39 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL539_RS15915 56fab36341e977daf61a7ac1177f4d04 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 9.7E-53 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL539_RS17355 2ed6416f628ce9c1d8662f33e000dc32 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 3.0E-111 T 29-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AL539_RS17355 2ed6416f628ce9c1d8662f33e000dc32 252 SUPERFAMILY SSF53167 4 251 1.7E-72 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS17355 2ed6416f628ce9c1d8662f33e000dc32 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL539_RS17355 2ed6416f628ce9c1d8662f33e000dc32 252 Pfam PF01048 Phosphorylase superfamily 20 244 4.4E-40 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL539_RS17355 2ed6416f628ce9c1d8662f33e000dc32 252 Gene3D G3DSA:3.40.50.1580 2 252 3.9E-56 T 29-03-2018 AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 Gene3D G3DSA:1.10.150.170 112 219 3.5E-33 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.086 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 Pfam PF01795 MraW methylase family 5 315 6.9E-111 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 1.9E-119 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 PIRSF PIRSF004486 1 316 1.7E-101 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 SUPERFAMILY SSF53335 7 113 1.81E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 SUPERFAMILY SSF53335 217 316 1.81E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS14540 5a0063fd883be2c593d1d2d3a59526cf 316 SUPERFAMILY SSF81799 113 216 6.41E-31 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS19155 dea8b69a552d38467849addc5bd5e695 176 Gene3D G3DSA:3.30.700.10 7 170 6.0E-15 T 29-03-2018 AL539_RS19155 dea8b69a552d38467849addc5bd5e695 176 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 8.2E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS19155 dea8b69a552d38467849addc5bd5e695 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.0E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS19155 dea8b69a552d38467849addc5bd5e695 176 SUPERFAMILY SSF54523 7 57 7.22E-13 T 29-03-2018 AL539_RS19155 dea8b69a552d38467849addc5bd5e695 176 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS04495 8fc1355fd1b7a8f42e71716e1fdbdd13 221 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 14 220 2.0E-82 T 29-03-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AL539_RS04495 8fc1355fd1b7a8f42e71716e1fdbdd13 221 Pfam PF06578 YOP proteins translocation protein K (YscK) 10 221 4.3E-70 T 29-03-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AL539_RS04475 f24d56cf6102513442c5a3b427ba8165 141 SUPERFAMILY SSF69635 2 123 1.62E-8 T 29-03-2018 AL539_RS04475 f24d56cf6102513442c5a3b427ba8165 141 Gene3D G3DSA:3.30.1460.10 1 129 5.3E-17 T 29-03-2018 AL539_RS04475 f24d56cf6102513442c5a3b427ba8165 141 Pfam PF05932 Tir chaperone protein (CesT) family 2 110 1.2E-8 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL539_RS09125 c1bc68fea703780cf1aa2b819e5ade38 102 Pfam PF05164 Cell division protein ZapA 6 89 3.3E-19 T 29-03-2018 IPR007838 Cell division protein ZapA-like AL539_RS09125 c1bc68fea703780cf1aa2b819e5ade38 102 SUPERFAMILY SSF102829 6 95 9.42E-24 T 29-03-2018 IPR007838 Cell division protein ZapA-like AL539_RS15125 78c5d7643c37aa0564b33b5776751cfe 110 Gene3D G3DSA:3.30.429.10 2 109 1.5E-37 T 29-03-2018 AL539_RS15125 78c5d7643c37aa0564b33b5776751cfe 110 SUPERFAMILY SSF55331 1 110 1.61E-36 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily AL539_RS15125 78c5d7643c37aa0564b33b5776751cfe 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 9.1E-38 T 29-03-2018 IPR015017 Protein of unknown function DUF1904 AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 Gene3D G3DSA:3.40.190.10 178 259 3.0E-20 T 29-03-2018 AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 Gene3D G3DSA:1.10.10.10 6 90 2.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 Pfam PF03466 LysR substrate binding domain 91 289 4.7E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 SUPERFAMILY SSF53850 92 290 1.71E-36 T 29-03-2018 AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 SUPERFAMILY SSF46785 7 112 2.94E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 Gene3D G3DSA:3.40.190.10 92 177 2.2E-13 T 29-03-2018 AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS24890 752b51a525e999e297d93f2a896a95e8 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS12245 fd5e81db4d01d31954ce796e144e2d90 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.4E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS12245 fd5e81db4d01d31954ce796e144e2d90 223 SUPERFAMILY SSF161098 13 203 3.14E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS12245 fd5e81db4d01d31954ce796e144e2d90 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.7E-24 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS12245 fd5e81db4d01d31954ce796e144e2d90 223 Gene3D G3DSA:1.10.3720.10 2 222 2.2E-40 T 29-03-2018 AL539_RS03500 2d6c83d1732acbec7157d59a696d0ab9 207 Gene3D G3DSA:3.90.550.10 14 205 1.1E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS03500 2d6c83d1732acbec7157d59a696d0ab9 207 Pfam PF12804 MobA-like NTP transferase domain 22 170 1.5E-33 T 29-03-2018 IPR025877 MobA-like NTP transferase AL539_RS03500 2d6c83d1732acbec7157d59a696d0ab9 207 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 20 200 2.2E-72 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL539_RS03500 2d6c83d1732acbec7157d59a696d0ab9 207 SUPERFAMILY SSF53448 19 201 3.11E-35 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS03500 2d6c83d1732acbec7157d59a696d0ab9 207 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 17 202 30.13 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL539_RS12370 ae3cd8bfa8da96aeae18c3e6033059cd 175 SUPERFAMILY SSF52218 3 158 1.62E-31 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS12370 ae3cd8bfa8da96aeae18c3e6033059cd 175 Pfam PF12724 Flavodoxin domain 5 153 4.3E-51 T 29-03-2018 IPR026816 Flavodoxin domain AL539_RS12370 ae3cd8bfa8da96aeae18c3e6033059cd 175 Gene3D G3DSA:3.40.50.360 3 175 4.6E-17 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS21740 ef9b310b38b1d034dbc7de05c35448b2 48 PIRSF PIRSF037205 1 48 7.9E-25 T 29-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 AL539_RS21740 ef9b310b38b1d034dbc7de05c35448b2 48 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 43 1.1E-22 T 29-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 AL539_RS21740 ef9b310b38b1d034dbc7de05c35448b2 48 Gene3D G3DSA:3.30.50.10 6 47 1.4E-10 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 SMART SM00487 310 519 6.0E-10 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 SUPERFAMILY SSF52540 639 729 1.77E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 SUPERFAMILY SSF52540 343 391 1.77E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 Gene3D G3DSA:3.40.50.300 232 505 1.1E-17 T 29-03-2018 AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 Gene3D G3DSA:3.40.50.300 548 874 9.9E-4 T 29-03-2018 AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 Pfam PF04851 Type III restriction enzyme, res subunit 313 482 1.1E-17 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 67 739 1.7E-136 T 29-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 SUPERFAMILY SSF52540 278 524 2.94E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00780 ea91bbd4d3b23c02729e42ca80c9d78a 1095 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 224 3.4E-38 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AL539_RS17375 5ea88bfd08026abb989a855d40bfc632 465 Gene3D G3DSA:1.25.40.10 188 260 0.0023 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17375 5ea88bfd08026abb989a855d40bfc632 465 Gene3D G3DSA:1.25.40.10 64 187 0.0081 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17375 5ea88bfd08026abb989a855d40bfc632 465 SUPERFAMILY SSF48452 121 160 1.48E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17375 5ea88bfd08026abb989a855d40bfc632 465 SUPERFAMILY SSF48452 204 259 1.48E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17805 36ee73c37090a2166874710288e918c6 139 PIRSF PIRSF003230 2 138 7.8E-48 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL539_RS17805 36ee73c37090a2166874710288e918c6 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 1.3E-37 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL539_RS17805 36ee73c37090a2166874710288e918c6 139 SUPERFAMILY SSF54637 6 132 4.25E-41 T 29-03-2018 IPR029069 HotDog domain AL539_RS17805 36ee73c37090a2166874710288e918c6 139 Pfam PF03061 Thioesterase superfamily 22 106 2.9E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL539_RS17805 36ee73c37090a2166874710288e918c6 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 1.4E-50 T 29-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AL539_RS17805 36ee73c37090a2166874710288e918c6 139 Gene3D G3DSA:3.10.129.10 1 137 2.3E-39 T 29-03-2018 AL539_RS00775 b4f9f63e9e660b29a1c8ac8d12581421 368 Pfam PF14281 PD-(D/E)XK nuclease superfamily 27 195 1.9E-17 T 29-03-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 AL539_RS19440 c618d934e961ea6d589b3a6c9358803f 243 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.1E-57 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL539_RS19440 c618d934e961ea6d589b3a6c9358803f 243 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 5.6E-54 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL539_RS18925 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 Gene3D G3DSA:1.20.1290.10 1 151 1.7E-26 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL539_RS18925 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 81 5.4E-15 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL539_RS18925 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 98 6.5E-13 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL539_RS18925 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 SUPERFAMILY SSF69118 6 147 1.02E-35 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 SUPERFAMILY SSF52172 1 124 1.07E-26 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 Gene3D G3DSA:3.40.50.2300 1 122 3.5E-25 T 29-03-2018 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 SUPERFAMILY SSF46894 125 198 4.08E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 4.9E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 Gene3D G3DSA:1.10.10.10 123 202 2.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 SMART SM00448 2 112 1.7E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 SMART SM00421 140 197 6.9E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS18240 ad0abc770f7ea450ef1d134bf6be129c 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 SUPERFAMILY SSF52540 7 237 1.05E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 Pfam PF00005 ABC transporter 18 184 2.4E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 Pfam PF00005 ABC transporter 337 466 6.2E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 Gene3D G3DSA:3.40.50.300 2 281 2.4E-50 T 29-03-2018 AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 SUPERFAMILY SSF52540 333 517 6.42E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 SMART SM00382 26 238 1.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 SMART SM00382 343 511 1.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 Pfam PF12848 ABC transporter 224 309 1.4E-21 T 29-03-2018 IPR032781 ABC-transporter extension domain AL539_RS03535 b4d45d165a1a9be9375efc508f1ac10f 530 Gene3D G3DSA:3.40.50.300 282 530 1.3E-45 T 29-03-2018 AL539_RS16995 3a65003ec92b1a2d60e7248cd947d2a2 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 29-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL539_RS16995 3a65003ec92b1a2d60e7248cd947d2a2 517 Gene3D G3DSA:1.10.275.10 1 203 3.0E-64 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AL539_RS16995 3a65003ec92b1a2d60e7248cd947d2a2 517 Gene3D G3DSA:1.20.200.10 204 516 2.1E-99 T 29-03-2018 AL539_RS16995 3a65003ec92b1a2d60e7248cd947d2a2 517 Pfam PF00221 Aromatic amino acid lyase 16 469 1.4E-164 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL539_RS16995 3a65003ec92b1a2d60e7248cd947d2a2 517 SUPERFAMILY SSF48557 5 513 7.85E-173 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AL539_RS07805 4a49a1a702eb7cf2b679a4e12f4d6951 168 Pfam PF13302 Acetyltransferase (GNAT) domain 34 139 5.3E-20 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS07805 4a49a1a702eb7cf2b679a4e12f4d6951 168 SUPERFAMILY SSF55729 3 147 1.77E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS07805 4a49a1a702eb7cf2b679a4e12f4d6951 168 Gene3D G3DSA:3.40.630.30 36 163 1.2E-17 T 29-03-2018 AL539_RS16425 5e57f70f8f81aaeb1b4accb01da38cdf 143 Pfam PF02169 LPP20 lipoprotein 20 118 1.1E-8 T 29-03-2018 IPR024952 Lipoprotein LPP20-like AL539_RS16425 5e57f70f8f81aaeb1b4accb01da38cdf 143 PIRSF PIRSF028687 1 143 3.1E-58 T 29-03-2018 IPR007293 Flagellar protein FlgP AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 SUPERFAMILY SSF51621 6 877 0.0 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.2E-67 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.2E-67 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.2E-67 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.2E-67 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.2E-67 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.2E-67 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.2E-67 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 29-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 Gene3D G3DSA:1.20.1440.90 274 381 7.4E-24 T 29-03-2018 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 3.5E-289 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.983 T 29-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 29-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL539_RS10360 66d7f1b040718b2c4bf44f27a9621521 877 Gene3D G3DSA:3.20.20.60 382 577 0.0023 T 29-03-2018 AL539_RS19810 b529d2ecf06111cea49749c53faffba3 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 1.5E-8 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL539_RS19810 b529d2ecf06111cea49749c53faffba3 266 Pfam PF00005 ABC transporter 23 185 9.1E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS19810 b529d2ecf06111cea49749c53faffba3 266 Gene3D G3DSA:3.40.50.300 3 264 1.9E-57 T 29-03-2018 AL539_RS19810 b529d2ecf06111cea49749c53faffba3 266 SUPERFAMILY SSF52540 6 256 5.97E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS19810 b529d2ecf06111cea49749c53faffba3 266 SMART SM00382 32 234 2.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17990 e548beee444058343961c74100252bbd 106 Gene3D G3DSA:1.10.760.10 13 102 4.5E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS17990 e548beee444058343961c74100252bbd 106 Pfam PF00034 Cytochrome c 33 98 2.0E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS17990 e548beee444058343961c74100252bbd 106 SUPERFAMILY SSF46626 32 102 2.51E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS10295 47619af286d7ad48ef4fc3f295c83c75 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 4.2E-45 T 29-03-2018 IPR007445 Pilus assembly protein, PilO AL539_RS10295 47619af286d7ad48ef4fc3f295c83c75 197 Gene3D G3DSA:3.30.70.60 92 197 2.1E-21 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL539_RS10295 47619af286d7ad48ef4fc3f295c83c75 197 PIRSF PIRSF016482 2 197 7.2E-68 T 29-03-2018 IPR007445 Pilus assembly protein, PilO AL539_RS10295 47619af286d7ad48ef4fc3f295c83c75 197 Gene3D G3DSA:1.10.287.540 56 91 1.8E-4 T 29-03-2018 AL539_RS06955 ae93472d270139634cc6f069f28efbb5 128 SUPERFAMILY SSF54593 2 124 2.15E-29 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS06955 ae93472d270139634cc6f069f28efbb5 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 120 4.3E-17 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS06955 ae93472d270139634cc6f069f28efbb5 128 Gene3D G3DSA:3.10.180.10 1 127 3.8E-30 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS16340 0fe19e0920d970461d4e5ac4196648c1 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.5E-16 T 29-03-2018 IPR021494 Protein of unknown function DUF3149 AL539_RS24125 5c5e063fcb76c98f6279e8111d49920c 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 1.8E-36 T 29-03-2018 IPR025489 Protein of unknown function (DUF4381 AL539_RS07695 f4380acb1e1750291b2a8293d7adfeb1 211 Gene3D G3DSA:3.30.420.10 2 211 9.4E-73 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS07695 f4380acb1e1750291b2a8293d7adfeb1 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 37.949 T 29-03-2018 IPR022898 Ribonuclease HII GO:0004523 AL539_RS07695 f4380acb1e1750291b2a8293d7adfeb1 211 Pfam PF01351 Ribonuclease HII 27 203 9.6E-40 T 29-03-2018 IPR024567 Ribonuclease HII/HIII domain AL539_RS07695 f4380acb1e1750291b2a8293d7adfeb1 211 SUPERFAMILY SSF53098 19 209 4.7E-71 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS25610 6ebcf88e03c7d4ce28f40a84c9c28302 222 Pfam PF08856 Protein of unknown function (DUF1826) 23 220 4.7E-62 T 29-03-2018 IPR014955 Protein of unknown function DUF1826 AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 PIRSF PIRSF002764 1 222 2.2E-83 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.1E-91 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 7.3E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 7.3E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 7.3E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 7.3E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 7.3E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 7.3E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS07270 9ab0d8b4effaaa54a206d57f9360a3c5 222 Pfam PF03379 CcmB protein 5 219 9.1E-90 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 4.9E-6 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 5.4E-25 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Gene3D G3DSA:1.10.1040.10 623 721 7.7E-18 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 SUPERFAMILY SSF48179 624 715 4.93E-25 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 205 9.0E-39 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 SUPERFAMILY SSF51735 315 496 1.09E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.389 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 SUPERFAMILY SSF48179 496 607 4.85E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Gene3D G3DSA:3.40.50.720 257 496 7.5E-60 T 29-03-2018 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 SUPERFAMILY SSF52096 2 304 3.45E-66 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 8.0E-58 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Gene3D G3DSA:3.90.226.10 2 206 9.5E-53 T 29-03-2018 AL539_RS12355 d3632b504ab3fa9d9a91ae6136cba696 723 Gene3D G3DSA:1.10.1040.10 504 593 4.1E-22 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL539_RS01425 e5601244bf2a13fc482d14ffd0346334 970 Pfam PF04851 Type III restriction enzyme, res subunit 65 257 1.5E-20 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL539_RS01425 e5601244bf2a13fc482d14ffd0346334 970 Gene3D G3DSA:3.40.50.300 9 272 2.4E-14 T 29-03-2018 AL539_RS01425 e5601244bf2a13fc482d14ffd0346334 970 SUPERFAMILY SSF52540 47 279 3.16E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS13325 3763bdbfff64141c33ae4db46147ca34 292 SUPERFAMILY SSF51735 1 288 1.12E-96 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13325 3763bdbfff64141c33ae4db46147ca34 292 Gene3D G3DSA:3.90.25.10 200 278 8.1E-21 T 29-03-2018 AL539_RS13325 3763bdbfff64141c33ae4db46147ca34 292 Gene3D G3DSA:3.40.50.720 1 171 3.8E-27 T 29-03-2018 AL539_RS13325 3763bdbfff64141c33ae4db46147ca34 292 Gene3D G3DSA:3.90.25.10 172 199 4.2E-9 T 29-03-2018 AL539_RS13325 3763bdbfff64141c33ae4db46147ca34 292 Pfam PF04321 RmlD substrate binding domain 1 286 4.1E-104 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL539_RS13325 3763bdbfff64141c33ae4db46147ca34 292 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 286 1.3E-99 T 29-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL539_RS19475 b6bd4c2857cc9bddb91dbd7b615dc563 139 Gene3D G3DSA:3.40.1650.10 1 139 2.8E-40 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL539_RS19475 b6bd4c2857cc9bddb91dbd7b615dc563 139 SUPERFAMILY SSF102546 1 139 1.83E-43 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL539_RS19475 b6bd4c2857cc9bddb91dbd7b615dc563 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.183 T 29-03-2018 IPR023064 D-ribose pyranase GO:0016872 AL539_RS19475 b6bd4c2857cc9bddb91dbd7b615dc563 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.9E-48 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL539_RS03800 0a58b36277ab27fa77b1117c674d87bb 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 3.3E-10 T 29-03-2018 IPR008621 Cbb3-type cytochrome oxidase component AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 1.7E-17 T 29-03-2018 IPR005644 NolW-like AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 29-03-2018 IPR005644 NolW-like AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 7.7E-16 T 29-03-2018 IPR005644 NolW-like AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR01032 Gene IV protein signature 590 612 3.2E-13 T 29-03-2018 AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR01032 Gene IV protein signature 537 565 3.2E-13 T 29-03-2018 AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR01032 Gene IV protein signature 469 492 3.2E-13 T 29-03-2018 AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF00263 Bacterial type II and III secretion system protein 448 610 5.2E-51 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 555 588 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 619 1.4E-158 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 479 489 2.7E-37 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 444 468 2.7E-37 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 2.7E-37 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 574 592 2.7E-37 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS12890 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 597 611 2.7E-37 T 29-03-2018 IPR001775 GspD/PilQ family AL539_RS04940 aee746dffb40f9f82e79a42cbd795780 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 7.3E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS09825 4893a0aa29763be91b2777b02e6b8100 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.5E-20 T 29-03-2018 IPR018638 Domain of unknown function DUF2061, membrane AL539_RS09825 4893a0aa29763be91b2777b02e6b8100 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 6.6E-21 T 29-03-2018 IPR018638 Domain of unknown function DUF2061, membrane AL539_RS17195 04bd4fe01d1eb91579f02de5cc83e1ad 275 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 34.347 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL539_RS17195 04bd4fe01d1eb91579f02de5cc83e1ad 275 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 259 7.8E-82 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL539_RS17195 04bd4fe01d1eb91579f02de5cc83e1ad 275 SUPERFAMILY SSF53474 16 261 1.07E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS17195 04bd4fe01d1eb91579f02de5cc83e1ad 275 Pfam PF12697 Alpha/beta hydrolase family 21 252 3.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS17195 04bd4fe01d1eb91579f02de5cc83e1ad 275 Gene3D G3DSA:3.40.50.1820 9 261 1.2E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS24625 0d0c2357a286169f39769cc2a3a4edc7 210 SMART SM01007 8 187 7.8E-61 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL539_RS24625 0d0c2357a286169f39769cc2a3a4edc7 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 186 4.6E-48 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL539_RS24625 0d0c2357a286169f39769cc2a3a4edc7 210 Gene3D G3DSA:3.40.225.10 2 195 1.7E-54 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL539_RS24625 0d0c2357a286169f39769cc2a3a4edc7 210 SUPERFAMILY SSF53639 1 205 1.88E-61 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AL539_RS00715 6079101fc74eef7b6b5caaba00959a54 158 Pfam PF06496 Protein of unknown function (DUF1097) 12 147 6.2E-32 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 AL539_RS07210 6079101fc74eef7b6b5caaba00959a54 158 Pfam PF06496 Protein of unknown function (DUF1097) 12 147 6.2E-32 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 AL539_RS10485 cd87c905d2d837b92ad521414cb68165 197 Pfam PF02525 Flavodoxin-like fold 10 165 2.6E-41 T 29-03-2018 IPR003680 Flavodoxin-like fold AL539_RS10485 cd87c905d2d837b92ad521414cb68165 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 49.217 T 29-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL539_RS10485 cd87c905d2d837b92ad521414cb68165 197 Gene3D G3DSA:3.40.50.360 7 186 3.9E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS10485 cd87c905d2d837b92ad521414cb68165 197 SUPERFAMILY SSF52218 9 184 3.99E-47 T 29-03-2018 IPR029039 Flavoprotein-like domain AL539_RS02885 8a093459c5711fe7083be66d9323ab45 316 PIRSF PIRSF026649 4 307 1.2E-88 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS02885 8a093459c5711fe7083be66d9323ab45 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 307 1.6E-140 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL539_RS02885 8a093459c5711fe7083be66d9323ab45 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 46.776 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AL539_RS02885 8a093459c5711fe7083be66d9323ab45 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 5.1E-86 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL539_RS03905 54bc88dd7ec5dcb6ef087efc3cbab97d 1613 SUPERFAMILY SSF53223 754 940 5.47E-26 T 29-03-2018 AL539_RS03905 54bc88dd7ec5dcb6ef087efc3cbab97d 1613 Gene3D G3DSA:3.40.50.10860 795 933 2.5E-4 T 29-03-2018 AL539_RS03905 54bc88dd7ec5dcb6ef087efc3cbab97d 1613 Gene3D G3DSA:3.40.50.720 938 1262 4.8E-48 T 29-03-2018 AL539_RS03905 54bc88dd7ec5dcb6ef087efc3cbab97d 1613 SUPERFAMILY SSF51735 945 1047 9.84E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS03905 54bc88dd7ec5dcb6ef087efc3cbab97d 1613 SUPERFAMILY SSF51735 1083 1281 9.84E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS03905 54bc88dd7ec5dcb6ef087efc3cbab97d 1613 PIRSF PIRSF036761 1 1610 0.0 T 29-03-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 AL539_RS03905 54bc88dd7ec5dcb6ef087efc3cbab97d 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 29-03-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AL539_RS19940 0df76b3c060eeae6db485684acde1517 166 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 152 2.6E-40 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL539_RS19940 0df76b3c060eeae6db485684acde1517 166 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 149 1.7E-33 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 Pfam PF10135 Rod binding protein 53 102 3.0E-15 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 Gene3D G3DSA:1.10.530.10 154 308 1.6E-34 T 29-03-2018 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 2.4E-21 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 SMART SM00047 148 307 2.3E-50 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 1.1E-126 T 29-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 1.4E-28 T 29-03-2018 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 1.4E-28 T 29-03-2018 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.4E-28 T 29-03-2018 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 1.4E-28 T 29-03-2018 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 1.4E-28 T 29-03-2018 AL539_RS16495 a983c50c15ac99d8710ab5de5ff94e64 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.4E-28 T 29-03-2018 AL539_RS13425 f0ade2ad5409558624ac12eb08aaa36c 206 SUPERFAMILY SSF46785 5 183 1.24E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS13425 f0ade2ad5409558624ac12eb08aaa36c 206 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.0E-7 T 29-03-2018 AL539_RS13425 f0ade2ad5409558624ac12eb08aaa36c 206 Gene3D G3DSA:1.10.10.10 1 72 1.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 29-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 SUPERFAMILY SSF53623 12 285 1.04E-84 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 SUPERFAMILY SSF53244 288 416 3.53E-31 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 Pfam PF08245 Mur ligase middle domain 54 193 8.2E-7 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 PIRSF PIRSF001563 7 420 2.7E-104 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 1.8E-103 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 Gene3D G3DSA:3.90.190.20 288 420 4.8E-29 T 29-03-2018 AL539_RS07045 7d4242f68470fbf9e2343804871457f2 420 Gene3D G3DSA:3.40.1190.10 2 287 7.4E-71 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL539_RS03625 cc2d5ddd1a1d070ccdef0415eb58ec26 296 Pfam PF15575 Immunity protein 49 63 280 1.6E-39 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS14255 249e5baed1800db1aec4bb92bb07aca5 639 SUPERFAMILY SSF52540 257 368 6.13E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14255 249e5baed1800db1aec4bb92bb07aca5 639 SUPERFAMILY SSF52540 2 205 6.13E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS14255 249e5baed1800db1aec4bb92bb07aca5 639 Pfam PF13175 AAA ATPase domain 14 356 2.3E-14 T 29-03-2018 AL539_RS14255 249e5baed1800db1aec4bb92bb07aca5 639 Gene3D G3DSA:3.40.50.300 1 388 7.7E-24 T 29-03-2018 AL539_RS05695 f53778f6494d7e5aca56fd75fead2a19 158 Gene3D G3DSA:1.10.10.10 1 144 7.9E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05695 f53778f6494d7e5aca56fd75fead2a19 158 SUPERFAMILY SSF46785 4 141 1.01E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS05695 f53778f6494d7e5aca56fd75fead2a19 158 SMART SM00347 24 124 4.4E-18 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS05695 f53778f6494d7e5aca56fd75fead2a19 158 Pfam PF01047 MarR family 31 89 4.0E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS12960 2f41153c6e2aaabf608c28460488c5e5 241 SUPERFAMILY SSF53271 66 239 3.67E-34 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AL539_RS12960 2f41153c6e2aaabf608c28460488c5e5 241 Pfam PF00156 Phosphoribosyl transferase domain 145 238 7.1E-11 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL539_RS12960 2f41153c6e2aaabf608c28460488c5e5 241 Gene3D G3DSA:3.40.50.2020 102 241 1.9E-21 T 29-03-2018 AL539_RS23130 14b1f8e126326899a897d6e8a18d16e7 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 285 1.9E-78 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL539_RS23130 14b1f8e126326899a897d6e8a18d16e7 331 PIRSF PIRSF006470 1 330 1.4E-96 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AL539_RS23130 14b1f8e126326899a897d6e8a18d16e7 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 308 1.3E-86 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AL539_RS24320 5484b9465da8bc8963764777c9105fc2 106 PIRSF PIRSF029143 3 106 1.5E-46 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL539_RS24320 5484b9465da8bc8963764777c9105fc2 106 Pfam PF04266 ASCH domain 9 105 7.2E-16 T 29-03-2018 IPR007374 ASCH domain AL539_RS24320 5484b9465da8bc8963764777c9105fc2 106 Gene3D G3DSA:2.30.130.30 3 105 5.3E-18 T 29-03-2018 AL539_RS24320 5484b9465da8bc8963764777c9105fc2 106 SUPERFAMILY SSF88697 5 105 3.98E-32 T 29-03-2018 IPR015947 PUA-like domain AL539_RS24320 5484b9465da8bc8963764777c9105fc2 106 SMART SM01022 8 106 5.3E-26 T 29-03-2018 IPR007374 ASCH domain AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 SUPERFAMILY SSF53850 94 296 5.43E-26 T 29-03-2018 AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 Pfam PF03466 LysR substrate binding domain 93 295 8.6E-24 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 Gene3D G3DSA:3.40.190.10 177 266 2.9E-16 T 29-03-2018 AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 SUPERFAMILY SSF46785 6 112 2.31E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 Gene3D G3DSA:1.10.10.10 1 87 2.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 Gene3D G3DSA:3.40.190.10 94 176 2.6E-9 T 29-03-2018 AL539_RS23755 1c5eafef5f6b43eb5dc4112c92298c7c 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS06620 91de64966e1458331510030cc72c9c1d 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 1.0E-14 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_RS06620 91de64966e1458331510030cc72c9c1d 300 Gene3D G3DSA:1.10.3720.10 38 300 2.4E-41 T 29-03-2018 AL539_RS06620 91de64966e1458331510030cc72c9c1d 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.7E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS06620 91de64966e1458331510030cc72c9c1d 300 SUPERFAMILY SSF161098 97 281 1.03E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS05100 d4333dfbd9148df9b80a7d48e85d1712 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 7.6E-14 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS14450 7024d091374c056c603946b0dc435b35 147 PIRSF PIRSF006318 1 136 3.0E-56 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 AL539_RS14450 7024d091374c056c603946b0dc435b35 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 6.7E-47 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 SUPERFAMILY SSF50249 4 68 7.07E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 2.3E-28 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 PIRSF PIRSF002599 1 69 3.7E-24 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 Gene3D G3DSA:2.40.50.140 4 69 9.8E-27 T 29-03-2018 AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 29-03-2018 IPR019844 Cold-shock conserved site AL539_RS25120 935879ca6c9509ff681b081565f083a5 69 SMART SM00357 6 69 4.2E-30 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AL539_RS11180 11ffb51b85133756afe45b9aebf50643 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 5.1E-54 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL539_RS11180 11ffb51b85133756afe45b9aebf50643 163 PIRSF PIRSF016548 3 163 2.5E-67 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL539_RS15835 d63ee5557f6c0dce0fc684545a8133ca 355 Gene3D G3DSA:3.40.630.10 42 283 2.6E-28 T 29-03-2018 AL539_RS15835 d63ee5557f6c0dce0fc684545a8133ca 355 SUPERFAMILY SSF53187 22 318 1.39E-77 T 29-03-2018 AL539_RS15835 d63ee5557f6c0dce0fc684545a8133ca 355 PIRSF PIRSF039012 3 324 2.1E-94 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS15835 d63ee5557f6c0dce0fc684545a8133ca 355 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 4.0E-72 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AL539_RS05750 a9771c70b576ac5c5338ed4b6c516298 360 SUPERFAMILY SSF50969 246 329 1.57E-9 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL539_RS05750 a9771c70b576ac5c5338ed4b6c516298 360 SUPERFAMILY SSF50969 62 182 1.57E-9 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL539_RS05750 a9771c70b576ac5c5338ed4b6c516298 360 PIRSF PIRSF028101 4 360 3.9E-163 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL539_RS05750 a9771c70b576ac5c5338ed4b6c516298 360 Gene3D G3DSA:2.120.10.30 45 355 1.5E-6 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL539_RS05750 a9771c70b576ac5c5338ed4b6c516298 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 1.1E-111 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL539_RS17750 24a9730f989d3804a9a27862533250b6 245 Gene3D G3DSA:3.40.50.150 21 245 6.6E-41 T 29-03-2018 AL539_RS17750 24a9730f989d3804a9a27862533250b6 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.388 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL539_RS17750 24a9730f989d3804a9a27862533250b6 245 PIRSF PIRSF006325 4 245 4.0E-125 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL539_RS17750 24a9730f989d3804a9a27862533250b6 245 Pfam PF13649 Methyltransferase domain 63 161 1.8E-13 T 29-03-2018 AL539_RS17750 24a9730f989d3804a9a27862533250b6 245 SUPERFAMILY SSF53335 23 245 4.8E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS17750 24a9730f989d3804a9a27862533250b6 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 1.5E-117 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL539_RS02340 efcb1b24b19c66222bae291f2aba6573 259 SUPERFAMILY SSF81301 65 224 1.63E-15 T 29-03-2018 AL539_RS02340 efcb1b24b19c66222bae291f2aba6573 259 Gene3D G3DSA:3.30.460.10 69 192 5.2E-10 T 29-03-2018 AL539_RS03510 c4d065262c18486bd27a26461fce3be5 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 3.4E-8 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS03510 c4d065262c18486bd27a26461fce3be5 232 Gene3D G3DSA:1.10.3720.10 2 227 3.9E-20 T 29-03-2018 AL539_RS03510 c4d065262c18486bd27a26461fce3be5 232 SUPERFAMILY SSF161098 15 222 4.32E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS07790 203d772b4f58c9210f925c1b452fd434 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 7.7E-35 T 29-03-2018 IPR023376 YqcC-like domain AL539_RS07790 203d772b4f58c9210f925c1b452fd434 104 Gene3D G3DSA:1.20.1440.40 3 103 1.9E-35 T 29-03-2018 IPR023376 YqcC-like domain AL539_RS07790 203d772b4f58c9210f925c1b452fd434 104 SUPERFAMILY SSF158452 1 103 8.24E-38 T 29-03-2018 IPR023376 YqcC-like domain AL539_RS07790 203d772b4f58c9210f925c1b452fd434 104 PIRSF PIRSF006257 1 104 8.4E-42 T 29-03-2018 IPR007384 Protein of unknown function UCP006257 AL539_RS21925 7bfefb37af7b775a06059ecee70e7e3d 142 Gene3D G3DSA:2.40.70.10 3 133 1.4E-35 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS21925 7bfefb37af7b775a06059ecee70e7e3d 142 SUPERFAMILY SSF50630 6 140 1.83E-42 T 29-03-2018 IPR021109 Aspartic peptidase domain AL539_RS21925 7bfefb37af7b775a06059ecee70e7e3d 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 5.7E-34 T 29-03-2018 AL539_RS16000 1cdc27bc2937b088813c029243fbd45f 258 PIRSF PIRSF029037 1 258 1.9E-117 T 29-03-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL539_RS16000 1cdc27bc2937b088813c029243fbd45f 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 3.9E-115 T 29-03-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL539_RS07740 80ee40d15e8a3cd4799d83a9a209d22a 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 29-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AL539_RS07740 80ee40d15e8a3cd4799d83a9a209d22a 280 Pfam PF01148 Cytidylyltransferase family 2 280 6.2E-70 T 29-03-2018 AL539_RS08145 e6a2fda2ceea4547a5f8859015b436f7 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 8.0E-64 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL539_RS08145 e6a2fda2ceea4547a5f8859015b436f7 351 Gene3D G3DSA:3.20.20.190 21 350 6.0E-65 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL539_RS08145 e6a2fda2ceea4547a5f8859015b436f7 351 SUPERFAMILY SSF51695 22 349 3.92E-91 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 Pfam PF03466 LysR substrate binding domain 88 293 7.2E-30 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 Gene3D G3DSA:3.40.190.10 92 171 9.6E-12 T 29-03-2018 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 Gene3D G3DSA:3.40.190.10 172 267 8.4E-15 T 29-03-2018 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.0E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 SUPERFAMILY SSF53850 88 300 2.57E-35 T 29-03-2018 AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 Gene3D G3DSA:1.10.10.10 4 91 5.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04210 ab0a63c7102902d6a1a201ab09907f16 307 SUPERFAMILY SSF46785 5 88 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16465 11ba7cad45a2a93ede49adf00af63b90 236 Pfam PF13860 FlgD Ig-like domain 119 185 1.4E-19 T 29-03-2018 IPR025965 FlgD Ig-like domain AL539_RS16465 11ba7cad45a2a93ede49adf00af63b90 236 Pfam PF13861 FlgD Tudor-like domain 94 230 1.9E-15 T 29-03-2018 IPR025963 FlgD Tudor-like domain AL539_RS16465 11ba7cad45a2a93ede49adf00af63b90 236 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 86 5.9E-22 T 29-03-2018 IPR005648 Flagellar hook capping protein AL539_RS03730 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS03730 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 5 256 3.0E-39 T 29-03-2018 AL539_RS03730 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.5E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 Gene3D G3DSA:2.40.50.180 39 103 1.0E-15 T 29-03-2018 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 SUPERFAMILY SSF52172 183 311 2.85E-21 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 Gene3D G3DSA:3.40.50.2300 177 317 1.3E-20 T 29-03-2018 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 Pfam PF01584 CheW-like domain 21 160 3.3E-33 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 PIRSF PIRSF002867 1 313 1.5E-106 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 Gene3D G3DSA:2.30.30.40 104 152 2.0E-9 T 29-03-2018 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 Pfam PF00072 Response regulator receiver domain 186 303 2.1E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 SMART SM00260 17 158 7.7E-27 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 SUPERFAMILY SSF50341 16 163 9.81E-33 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AL539_RS06340 9648d1f60920c242bdcb67c69cde1c08 317 SMART SM00448 184 305 3.7E-12 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS17180 92f84a047307cf53f1df0bfde669242b 404 Pfam PF00155 Aminotransferase class I and II 61 390 1.1E-48 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS17180 92f84a047307cf53f1df0bfde669242b 404 Gene3D G3DSA:3.90.1150.10 281 404 3.8E-24 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS17180 92f84a047307cf53f1df0bfde669242b 404 Gene3D G3DSA:3.40.640.10 53 280 1.2E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS17180 92f84a047307cf53f1df0bfde669242b 404 SUPERFAMILY SSF53383 5 400 4.44E-96 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS12610 5fe2033b4abed51cad6c34ab4f2442d6 175 Pfam PF00210 Ferritin-like domain 8 143 4.3E-40 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL539_RS12610 5fe2033b4abed51cad6c34ab4f2442d6 175 Gene3D G3DSA:1.20.1260.10 1 162 1.2E-41 T 29-03-2018 IPR012347 Ferritin-related AL539_RS12610 5fe2033b4abed51cad6c34ab4f2442d6 175 SUPERFAMILY SSF47240 1 160 1.18E-58 T 29-03-2018 IPR009078 Ferritin-like superfamily AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 Pfam PF00326 Prolyl oligopeptidase family 504 720 1.4E-69 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 SUPERFAMILY SSF50993 39 451 5.49E-94 T 29-03-2018 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 SUPERFAMILY SSF53474 452 700 2.99E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 4.2E-96 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 Gene3D G3DSA:3.40.50.1820 200 721 4.8E-59 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 Gene3D G3DSA:3.40.50.1820 24 145 2.7E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 6.4E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 6.4E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 6.4E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 6.4E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 6.4E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS21950 982ae7af9b533ece5238c25376e4a2e8 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 6.4E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 Gene3D G3DSA:3.40.50.720 1 106 1.2E-18 T 29-03-2018 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 Gene3D G3DSA:3.40.1010.10 213 297 0.0023 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 2.2E-13 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 Pfam PF13241 Putative NAD(P)-binding 6 116 2.1E-31 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.4E-7 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 Gene3D G3DSA:3.30.160.110 107 147 2.4E-18 T 29-03-2018 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 Gene3D G3DSA:1.10.8.210 152 208 4.9E-15 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 SUPERFAMILY SSF75615 115 202 2.49E-26 T 29-03-2018 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 203 9.1E-63 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AL539_RS03985 b6218c402b935b114a034d50aa244201 306 SUPERFAMILY SSF51735 1 113 1.61E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS05180 32b7473bec2af87cfbcff10ba52b0445 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 2.8E-14 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS15700 f5c3c5f5e4ede8569d618d819763e63b 408 SUPERFAMILY SSF56349 106 386 2.94E-56 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS15700 f5c3c5f5e4ede8569d618d819763e63b 408 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 158 2.4E-6 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL539_RS15700 f5c3c5f5e4ede8569d618d819763e63b 408 Gene3D G3DSA:1.10.150.130 101 212 4.1E-19 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS15700 f5c3c5f5e4ede8569d618d819763e63b 408 Gene3D G3DSA:1.10.443.10 213 392 1.3E-22 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS15700 f5c3c5f5e4ede8569d618d819763e63b 408 Pfam PF00589 Phage integrase family 215 376 6.4E-25 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS15700 f5c3c5f5e4ede8569d618d819763e63b 408 Pfam PF13356 Arm DNA-binding domain 11 93 7.0E-17 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AL539_RS03340 37a30ad4c3cb6be3322189369a16a1ff 374 SUPERFAMILY SSF53756 76 372 2.88E-22 T 29-03-2018 AL539_RS03340 37a30ad4c3cb6be3322189369a16a1ff 374 Gene3D G3DSA:3.40.50.2000 4 207 3.4E-4 T 29-03-2018 AL539_RS03340 37a30ad4c3cb6be3322189369a16a1ff 374 Pfam PF13692 Glycosyl transferases group 1 216 321 1.8E-6 T 29-03-2018 AL539_RS03340 37a30ad4c3cb6be3322189369a16a1ff 374 Gene3D G3DSA:3.40.50.2000 208 365 1.5E-16 T 29-03-2018 AL539_RS20940 5766a29e2d0771bfb87a53cd8c7db0cf 170 SUPERFAMILY SSF51182 28 140 1.32E-21 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS20940 5766a29e2d0771bfb87a53cd8c7db0cf 170 Gene3D G3DSA:2.60.120.10 13 159 4.8E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS20940 5766a29e2d0771bfb87a53cd8c7db0cf 170 Pfam PF12973 ChrR Cupin-like domain 28 105 3.6E-7 T 29-03-2018 IPR025979 ChrR-like cupin domain AL539_RS18670 2c949624dd452939cc7f3962fd1e137c 544 Gene3D G3DSA:3.40.50.300 1 257 3.7E-16 T 29-03-2018 AL539_RS18670 2c949624dd452939cc7f3962fd1e137c 544 Gene3D G3DSA:3.40.50.300 258 356 0.025 T 29-03-2018 AL539_RS18670 2c949624dd452939cc7f3962fd1e137c 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 4.5E-146 T 29-03-2018 IPR022602 Protein of unknown function DUF2813 AL539_RS18670 2c949624dd452939cc7f3962fd1e137c 544 SUPERFAMILY SSF52540 1 324 5.42E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18670 2c949624dd452939cc7f3962fd1e137c 544 Gene3D G3DSA:3.40.1360.10 360 510 7.4E-5 T 29-03-2018 AL539_RS15450 5f88288eea1f28df819f4d1d166bdd0d 476 Pfam PF03553 Na+/H+ antiporter family 37 240 4.3E-13 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL539_RS15780 59387becd38c7601bb5c492e83f1040c 212 PIRSF PIRSF004525 1 212 5.2E-11 T 29-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AL539_RS19305 01cae19c16a7219846e7070643fde62a 433 Pfam PF04055 Radical SAM superfamily 43 210 3.0E-13 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL539_RS19305 01cae19c16a7219846e7070643fde62a 433 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 194 432 7.0E-12 T 29-03-2018 AL539_RS19305 01cae19c16a7219846e7070643fde62a 433 SUPERFAMILY SSF102114 31 386 1.12E-41 T 29-03-2018 AL539_RS19305 01cae19c16a7219846e7070643fde62a 433 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 316 405 3.2E-18 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AL539_RS19305 01cae19c16a7219846e7070643fde62a 433 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 34 423 2.1E-156 T 29-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AL539_RS19305 01cae19c16a7219846e7070643fde62a 433 Gene3D G3DSA:3.20.20.70 28 378 4.5E-36 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS19305 01cae19c16a7219846e7070643fde62a 433 Pfam PF13186 Iron-sulfur cluster-binding domain 317 377 1.0E-8 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AL539_RS06165 2cd5cf338d5ae723f413f52fdd9e4801 234 SMART SM00382 35 222 5.4E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS06165 2cd5cf338d5ae723f413f52fdd9e4801 234 Gene3D G3DSA:3.40.50.300 3 229 5.1E-69 T 29-03-2018 AL539_RS06165 2cd5cf338d5ae723f413f52fdd9e4801 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS06165 2cd5cf338d5ae723f413f52fdd9e4801 234 Pfam PF00005 ABC transporter 26 174 4.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS06165 2cd5cf338d5ae723f413f52fdd9e4801 234 SUPERFAMILY SSF52540 6 226 1.36E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS21840 814702ffdc935da8e70e1030c07448ff 408 Gene3D G3DSA:3.50.50.60 2 213 1.8E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS21840 814702ffdc935da8e70e1030c07448ff 408 Pfam PF01266 FAD dependent oxidoreductase 6 397 1.9E-65 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS21840 814702ffdc935da8e70e1030c07448ff 408 Gene3D G3DSA:3.30.9.10 214 358 7.7E-15 T 29-03-2018 AL539_RS21840 814702ffdc935da8e70e1030c07448ff 408 SUPERFAMILY SSF51905 5 300 1.94E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS25220 ed52d71ecd7f20d1670f19f12e6421f4 297 Pfam PF01545 Cation efflux family 13 214 2.4E-31 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL539_RS25220 ed52d71ecd7f20d1670f19f12e6421f4 297 SUPERFAMILY SSF161111 7 214 7.45E-32 T 29-03-2018 AL539_RS25220 ed52d71ecd7f20d1670f19f12e6421f4 297 Gene3D G3DSA:1.20.1510.10 9 214 7.6E-23 T 29-03-2018 AL539_RS25220 ed52d71ecd7f20d1670f19f12e6421f4 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 281 9.1E-27 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL539_RS10630 5e7b835780674c417b4ae3971bff3b3a 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 8.7E-23 T 29-03-2018 IPR019201 Protein of unknown function DUF2065 AL539_RS03930 1c12956c635cd91763719baea22df68f 208 Pfam PF04352 ProQ/FINO family 6 113 1.0E-43 T 29-03-2018 IPR016103 ProQ/FinO domain AL539_RS03930 1c12956c635cd91763719baea22df68f 208 Pfam PF17516 ProQ C-terminal domain 159 207 1.1E-22 T 29-03-2018 IPR035236 RNA chaperone ProQ, C-terminal AL539_RS03930 1c12956c635cd91763719baea22df68f 208 SMART SM00945 3 117 8.3E-66 T 29-03-2018 IPR016103 ProQ/FinO domain AL539_RS03930 1c12956c635cd91763719baea22df68f 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 208 30.457 T 29-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AL539_RS03930 1c12956c635cd91763719baea22df68f 208 Gene3D G3DSA:1.10.1710.10 1 119 2.3E-41 T 29-03-2018 IPR016103 ProQ/FinO domain AL539_RS03930 1c12956c635cd91763719baea22df68f 208 SUPERFAMILY SSF48657 4 117 9.68E-41 T 29-03-2018 IPR016103 ProQ/FinO domain AL539_RS11480 48869bfa1663f171141a44c8d1c31245 206 Pfam PF07947 YhhN family 26 204 2.9E-32 T 29-03-2018 IPR012506 YhhN-like GO:0016021 AL539_RS12270 c681d2ed6e34eb0bbb21e53f27e721b5 359 Gene3D G3DSA:3.40.50.300 1 359 6.9E-33 T 29-03-2018 AL539_RS12270 c681d2ed6e34eb0bbb21e53f27e721b5 359 SUPERFAMILY SSF52540 1 344 1.5E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS12270 c681d2ed6e34eb0bbb21e53f27e721b5 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL539_RS12270 c681d2ed6e34eb0bbb21e53f27e721b5 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 4.7E-37 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AL539_RS12270 c681d2ed6e34eb0bbb21e53f27e721b5 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL539_RS12270 c681d2ed6e34eb0bbb21e53f27e721b5 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.055 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL539_RS12270 c681d2ed6e34eb0bbb21e53f27e721b5 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 4.1E-121 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL539_RS08480 b87ad3dd45203e856892b2b27aa322ca 296 Gene3D G3DSA:1.10.357.20 113 295 3.7E-40 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS08480 b87ad3dd45203e856892b2b27aa322ca 296 SUPERFAMILY SSF161093 114 293 3.92E-44 T 29-03-2018 AL539_RS08480 b87ad3dd45203e856892b2b27aa322ca 296 Pfam PF01769 Divalent cation transporter 157 286 7.5E-27 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL539_RS18415 e166374120cc0a1c505224eb6f2aa44d 93 Pfam PF10115 Transcriptional activator HlyU 2 92 1.5E-38 T 29-03-2018 IPR018772 Transcription activator HlyU AL539_RS07230 ce321eb06a80caef199ee334331c371f 257 Pfam PF04333 MlaA lipoprotein 40 232 2.5E-62 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL539_RS07230 ce321eb06a80caef199ee334331c371f 257 PRINTS PR01805 VacJ lipoprotein signature 42 55 2.5E-29 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL539_RS07230 ce321eb06a80caef199ee334331c371f 257 PRINTS PR01805 VacJ lipoprotein signature 148 165 2.5E-29 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL539_RS07230 ce321eb06a80caef199ee334331c371f 257 PRINTS PR01805 VacJ lipoprotein signature 111 128 2.5E-29 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL539_RS07230 ce321eb06a80caef199ee334331c371f 257 PRINTS PR01805 VacJ lipoprotein signature 60 76 2.5E-29 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AL539_RS26070 8c8c3acd5bf1cc68cde44e476cd2bc64 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 8.7E-22 T 29-03-2018 IPR005175 PPC domain AL539_RS26070 8c8c3acd5bf1cc68cde44e476cd2bc64 134 Gene3D G3DSA:3.30.1330.80 4 134 2.5E-35 T 29-03-2018 AL539_RS26070 8c8c3acd5bf1cc68cde44e476cd2bc64 134 SUPERFAMILY SSF117856 4 131 1.2E-35 T 29-03-2018 AL539_RS19680 04a99e812608c244bdb3b413f13c668f 288 Gene3D G3DSA:3.30.70.100 177 272 3.5E-22 T 29-03-2018 AL539_RS19680 04a99e812608c244bdb3b413f13c668f 288 Pfam PF00924 Mechanosensitive ion channel 66 267 8.3E-51 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL539_RS19680 04a99e812608c244bdb3b413f13c668f 288 Gene3D G3DSA:2.30.30.60 125 175 4.5E-15 T 29-03-2018 AL539_RS19680 04a99e812608c244bdb3b413f13c668f 288 SUPERFAMILY SSF82861 24 107 1.26E-11 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL539_RS19680 04a99e812608c244bdb3b413f13c668f 288 SUPERFAMILY SSF82689 179 278 1.7E-27 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL539_RS19680 04a99e812608c244bdb3b413f13c668f 288 SUPERFAMILY SSF50182 108 174 3.92E-18 T 29-03-2018 IPR010920 LSM domain AL539_RS20455 f646bfa913fbb01aedc231a979ffca0f 313 SUPERFAMILY SSF103481 209 294 6.67E-9 T 29-03-2018 AL539_RS20455 f646bfa913fbb01aedc231a979ffca0f 313 SUPERFAMILY SSF103481 44 144 2.48E-10 T 29-03-2018 AL539_RS20455 f646bfa913fbb01aedc231a979ffca0f 313 Pfam PF00892 EamA-like transporter family 156 294 1.5E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS20455 f646bfa913fbb01aedc231a979ffca0f 313 Pfam PF00892 EamA-like transporter family 8 141 6.5E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 Gene3D G3DSA:3.40.50.1820 370 716 3.7E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS24735 681363dd2000470ed00aace8277450f5 719 Gene3D G3DSA:3.40.50.1820 39 271 2.0E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS24735 681363dd2000470ed00aace8277450f5 719 SUPERFAMILY SSF53474 452 697 4.85E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS24735 681363dd2000470ed00aace8277450f5 719 Pfam PF00326 Prolyl oligopeptidase family 499 714 4.2E-70 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 440 3.4E-130 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 2.1E-62 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 2.1E-62 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 2.1E-62 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 2.1E-62 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 2.1E-62 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 2.1E-62 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 545 575 - T 29-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AL539_RS24735 681363dd2000470ed00aace8277450f5 719 SUPERFAMILY SSF50993 37 448 1.6E-102 T 29-03-2018 AL539_RS06015 fbf915674bdf00eb87b9a38930c6dc0b 394 Pfam PF17327 Acyl homoserine lactone synthase 18 389 2.8E-137 T 29-03-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AL539_RS06015 fbf915674bdf00eb87b9a38930c6dc0b 394 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 183 385 2.0E-72 T 29-03-2018 IPR020384 Homoserine lactone synthase, LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AL539_RS06015 fbf915674bdf00eb87b9a38930c6dc0b 394 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 156 1.0E-36 T 29-03-2018 IPR020374 Homoserine lactone synthase, LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AL539_RS11165 f3e4f6d508627fa350891a1a591a3f16 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 179 1.9E-26 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS11165 f3e4f6d508627fa350891a1a591a3f16 190 SMART SM00986 27 183 3.0E-31 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS11165 f3e4f6d508627fa350891a1a591a3f16 190 SUPERFAMILY SSF52141 2 189 7.52E-59 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS11165 f3e4f6d508627fa350891a1a591a3f16 190 Gene3D G3DSA:3.40.470.10 1 190 1.3E-52 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL539_RS11165 f3e4f6d508627fa350891a1a591a3f16 190 SMART SM00987 27 183 3.0E-31 T 29-03-2018 AL539_RS11350 ab72bf6d5a60d17cad8329e9d9e1a8e8 230 Gene3D G3DSA:3.90.1490.10 147 225 6.7E-13 T 29-03-2018 AL539_RS11350 ab72bf6d5a60d17cad8329e9d9e1a8e8 230 Gene3D G3DSA:3.40.50.620 1 145 4.9E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS11350 ab72bf6d5a60d17cad8329e9d9e1a8e8 230 SUPERFAMILY SSF52402 4 222 5.18E-55 T 29-03-2018 AL539_RS11350 ab72bf6d5a60d17cad8329e9d9e1a8e8 230 Pfam PF01902 Diphthamide synthase 6 214 8.5E-22 T 29-03-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 AL539_RS07245 c95685021fa75f500407c14ed0082b25 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL539_RS07245 c95685021fa75f500407c14ed0082b25 184 SUPERFAMILY SSF52833 46 178 6.43E-39 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS07245 c95685021fa75f500407c14ed0082b25 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 1.5E-71 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL539_RS07245 c95685021fa75f500407c14ed0082b25 184 Gene3D G3DSA:3.40.30.10 19 178 2.4E-28 T 29-03-2018 AL539_RS07245 c95685021fa75f500407c14ed0082b25 184 Pfam PF08534 Redoxin 41 164 3.3E-27 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 PIRSF PIRSF006621 9 330 2.2E-101 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 315 5.1E-109 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 1.2E-131 T 29-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 Gene3D G3DSA:3.20.20.70 17 249 1.5E-56 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 Gene3D G3DSA:1.10.1200.80 261 331 5.8E-20 T 29-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.747 T 29-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AL539_RS11020 fd5e4fe2178408579950a4722211cbb1 331 SUPERFAMILY SSF51395 19 328 5.68E-90 T 29-03-2018 AL539_RS06195 da32c16b038095f56b3ff35dbd6b92f7 270 Gene3D G3DSA:3.90.1720.10 105 255 3.2E-9 T 29-03-2018 AL539_RS06195 da32c16b038095f56b3ff35dbd6b92f7 270 Pfam PF05257 CHAP domain 151 225 6.2E-6 T 29-03-2018 IPR007921 CHAP domain AL539_RS06195 da32c16b038095f56b3ff35dbd6b92f7 270 Gene3D G3DSA:1.10.101.10 8 96 2.3E-4 T 29-03-2018 IPR002477 Peptidoglycan binding-like AL539_RS06195 da32c16b038095f56b3ff35dbd6b92f7 270 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 110 238 5.8E-32 T 29-03-2018 IPR013423 Conserved hypothetical protein CHP02594 AL539_RS23395 937ae67deb9efb047247513881405949 213 Pfam PF01914 MarC family integral membrane protein 8 206 8.8E-53 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS23395 937ae67deb9efb047247513881405949 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 203 4.5E-49 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS20215 d33666beccf0bd5290b2001a2ab117cf 321 Pfam PF03595 Voltage-dependent anion channel 12 304 6.8E-25 T 29-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL539_RS11750 e0343a1a4fe744c372291f91a4ab50d5 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 2.1E-23 T 29-03-2018 IPR018740 Protein of unknown function DUF2282, integral membrane AL539_RS07200 5327b920593303de9a9f68e3ddfd3605 684 Gene3D G3DSA:1.10.443.10 302 512 6.6E-8 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS07200 5327b920593303de9a9f68e3ddfd3605 684 SUPERFAMILY SSF56349 462 508 8.63E-6 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS07200 5327b920593303de9a9f68e3ddfd3605 684 SUPERFAMILY SSF56349 316 432 8.63E-6 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS00705 5327b920593303de9a9f68e3ddfd3605 684 Gene3D G3DSA:1.10.443.10 302 512 6.6E-8 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS00705 5327b920593303de9a9f68e3ddfd3605 684 SUPERFAMILY SSF56349 462 508 8.63E-6 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS00705 5327b920593303de9a9f68e3ddfd3605 684 SUPERFAMILY SSF56349 316 432 8.63E-6 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL539_RS00110 accbec9c2c425be6aeade260a0bfc51f 1024 Gene3D G3DSA:1.10.3210.10 80 304 1.5E-12 T 29-03-2018 AL539_RS00110 accbec9c2c425be6aeade260a0bfc51f 1024 Pfam PF07514 Putative helicase 46 355 6.6E-101 T 29-03-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative AL539_RS00110 accbec9c2c425be6aeade260a0bfc51f 1024 SUPERFAMILY SSF109604 200 277 2.62E-7 T 29-03-2018 AL539_RS00110 accbec9c2c425be6aeade260a0bfc51f 1024 SUPERFAMILY SSF109604 94 163 2.62E-7 T 29-03-2018 AL539_RS19205 8b94b7455e76805cc13d0616b1b25f96 393 SUPERFAMILY SSF53383 43 386 7.34E-73 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS19205 8b94b7455e76805cc13d0616b1b25f96 393 Gene3D G3DSA:3.40.640.10 59 275 1.8E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS19205 8b94b7455e76805cc13d0616b1b25f96 393 Pfam PF00155 Aminotransferase class I and II 46 378 2.5E-29 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL539_RS19205 8b94b7455e76805cc13d0616b1b25f96 393 Gene3D G3DSA:3.90.1150.10 276 390 8.3E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS13770 e556992c849ff06c81fda3e069ef173b 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 919 1253 3.7E-65 T 29-03-2018 IPR007452 Translocation and assembly module TamB AL539_RS00075 17f3099aefc04705a2df01199274300b 315 Pfam PF06586 TraK protein 71 292 9.6E-22 T 29-03-2018 IPR010563 Pilus assembly TraK AL539_RS04545 3cddc915bc1ab8684d18cb7b5608d567 326 Pfam PF16806 Antiactivator protein ExsD 52 309 1.9E-78 T 29-03-2018 IPR031835 Antiactivator protein ExsD AL539_RS19145 2190913055e1510bd1ad05f78a571630 301 SUPERFAMILY SSF103481 60 143 9.42E-11 T 29-03-2018 AL539_RS19145 2190913055e1510bd1ad05f78a571630 301 TIGRFAM TIGR00688 rarD: protein RarD 7 259 7.0E-50 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AL539_RS19145 2190913055e1510bd1ad05f78a571630 301 SUPERFAMILY SSF103481 189 285 8.11E-9 T 29-03-2018 AL539_RS19145 2190913055e1510bd1ad05f78a571630 301 Pfam PF00892 EamA-like transporter family 152 283 1.5E-6 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS19145 2190913055e1510bd1ad05f78a571630 301 Pfam PF00892 EamA-like transporter family 7 141 1.1E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS23040 9f35ab05123a8ccc5c4b97a597e47df2 307 Gene3D G3DSA:3.40.50.1980 150 307 4.5E-26 T 29-03-2018 AL539_RS23040 9f35ab05123a8ccc5c4b97a597e47df2 307 Gene3D G3DSA:3.40.50.1980 26 149 1.9E-24 T 29-03-2018 AL539_RS23040 9f35ab05123a8ccc5c4b97a597e47df2 307 Pfam PF01497 Periplasmic binding protein 52 281 3.3E-28 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AL539_RS23040 9f35ab05123a8ccc5c4b97a597e47df2 307 SUPERFAMILY SSF53807 27 291 4.71E-57 T 29-03-2018 AL539_RS04745 f56b760b8f1d2405b91bae9e8620a3fe 95 Gene3D G3DSA:3.30.70.100 2 94 1.3E-10 T 29-03-2018 AL539_RS04745 f56b760b8f1d2405b91bae9e8620a3fe 95 SUPERFAMILY SSF54909 4 84 2.06E-15 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS04745 f56b760b8f1d2405b91bae9e8620a3fe 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 28 71 6.8E-7 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL539_RS01800 1a0f6dc680b87e7bf75e40054a84b287 77 Pfam PF06667 Phage shock protein B 3 74 6.2E-32 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL539_RS01800 1a0f6dc680b87e7bf75e40054a84b287 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 7.9E-36 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL539_RS13220 6dacd1c1b039748a4cade7a95a7ebb32 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 2.7E-96 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13220 6dacd1c1b039748a4cade7a95a7ebb32 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 1.7E-158 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL539_RS13220 6dacd1c1b039748a4cade7a95a7ebb32 352 SUPERFAMILY SSF51735 1 337 2.69E-92 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS13220 6dacd1c1b039748a4cade7a95a7ebb32 352 Gene3D G3DSA:3.90.25.10 229 336 5.8E-28 T 29-03-2018 AL539_RS13220 6dacd1c1b039748a4cade7a95a7ebb32 352 Gene3D G3DSA:3.40.50.720 1 228 5.7E-58 T 29-03-2018 AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 Gene3D G3DSA:3.40.190.10 178 262 1.9E-13 T 29-03-2018 AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 SUPERFAMILY SSF53850 87 294 5.43E-33 T 29-03-2018 AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 SUPERFAMILY SSF46785 1 86 2.33E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 Pfam PF03466 LysR substrate binding domain 87 290 1.2E-32 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 Gene3D G3DSA:1.10.10.10 1 79 4.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 Gene3D G3DSA:3.40.190.10 80 177 3.2E-14 T 29-03-2018 AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.6E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04235 110fd115d8a47b582fb256a2332aae48 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS02425 6096e96c65ef7e66f055f9aa79694671 191 Gene3D G3DSA:1.10.3420.10 54 140 2.8E-16 T 29-03-2018 AL539_RS02425 6096e96c65ef7e66f055f9aa79694671 191 Gene3D G3DSA:1.10.3420.10 9 53 6.8E-4 T 29-03-2018 AL539_RS02425 6096e96c65ef7e66f055f9aa79694671 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 5.9E-7 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL539_RS13370 f89bace9b1721fd28f3d58dc66935d6d 198 Pfam PF02397 Bacterial sugar transferase 2 176 3.5E-64 T 29-03-2018 IPR003362 Bacterial sugar transferase AL539_RS02370 7bc35e7e76104db316897245ccdb067d 473 Gene3D G3DSA:3.30.420.10 1 199 1.9E-26 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS02370 7bc35e7e76104db316897245ccdb067d 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.4E-103 T 29-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AL539_RS02370 7bc35e7e76104db316897245ccdb067d 473 Pfam PF00929 Exonuclease 11 190 1.7E-24 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS02370 7bc35e7e76104db316897245ccdb067d 473 PIRSF PIRSF000977 1 473 4.3E-197 T 29-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AL539_RS02370 7bc35e7e76104db316897245ccdb067d 473 SUPERFAMILY SSF53098 7 471 1.17E-139 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS02370 7bc35e7e76104db316897245ccdb067d 473 SMART SM00479 8 201 0.0026 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_RS20500 de0c1f91a1ff7b7bbd15cec8cc077163 216 Pfam PF04337 Protein of unknown function, DUF480 5 158 3.3E-65 T 29-03-2018 IPR007432 Protein of unknown function DUF480 AL539_RS20500 de0c1f91a1ff7b7bbd15cec8cc077163 216 SUPERFAMILY SSF46785 2 84 1.36E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20500 de0c1f91a1ff7b7bbd15cec8cc077163 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 216 35.38 T 29-03-2018 IPR007432 Protein of unknown function DUF480 AL539_RS20500 de0c1f91a1ff7b7bbd15cec8cc077163 216 SUPERFAMILY SSF46785 90 174 6.39E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20500 de0c1f91a1ff7b7bbd15cec8cc077163 216 Gene3D G3DSA:1.10.10.10 2 87 1.3E-37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20500 de0c1f91a1ff7b7bbd15cec8cc077163 216 Gene3D G3DSA:1.20.5.190 184 215 0.003 T 29-03-2018 AL539_RS20500 de0c1f91a1ff7b7bbd15cec8cc077163 216 Gene3D G3DSA:1.10.10.10 97 171 1.2E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS17880 78651a05fdfafc73d3e262644946564e 1172 SUPERFAMILY SSF52540 123 288 4.16E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17880 78651a05fdfafc73d3e262644946564e 1172 Gene3D G3DSA:3.40.50.300 139 572 1.2E-8 T 29-03-2018 AL539_RS17880 78651a05fdfafc73d3e262644946564e 1172 Gene3D G3DSA:3.40.50.300 61 138 3.5E-5 T 29-03-2018 AL539_RS17880 78651a05fdfafc73d3e262644946564e 1172 Pfam PF06744 Type VI secretion protein IcmF C-terminal 927 1120 7.3E-60 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL539_RS17880 78651a05fdfafc73d3e262644946564e 1172 Pfam PF06761 Intracellular multiplication and human macrophage-killing 503 803 5.4E-76 T 29-03-2018 IPR009612 ImcF-related AL539_RS17880 78651a05fdfafc73d3e262644946564e 1172 Pfam PF14331 ImcF-related N-terminal domain 193 450 5.5E-87 T 29-03-2018 IPR025743 ImcF-related, N-terminal domain AL539_RS17880 78651a05fdfafc73d3e262644946564e 1172 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1169 0.0 T 29-03-2018 IPR017731 Type VI secretion system, IcmF AL539_RS13210 89edc3ec78425a36b545b19d9d90caed 131 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL539_RS13210 89edc3ec78425a36b545b19d9d90caed 131 Gene3D G3DSA:1.10.3830.10 19 130 1.6E-39 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL539_RS13210 89edc3ec78425a36b545b19d9d90caed 131 Pfam PF01219 Prokaryotic diacylglycerol kinase 29 129 2.1E-34 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL539_RS21695 b2ccf9ea1c807d19e76613aba415b2c2 104 SUPERFAMILY SSF54909 3 79 3.7E-11 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS21695 b2ccf9ea1c807d19e76613aba415b2c2 104 Gene3D G3DSA:3.30.70.100 1 91 8.4E-6 T 29-03-2018 AL539_RS21070 7ef090c877983c8e659f092bd815eb8e 355 SUPERFAMILY SSF53850 49 348 9.97E-48 T 29-03-2018 AL539_RS21070 7ef090c877983c8e659f092bd815eb8e 355 Gene3D G3DSA:3.40.190.10 178 352 1.4E-18 T 29-03-2018 AL539_RS21070 7ef090c877983c8e659f092bd815eb8e 355 Gene3D G3DSA:3.40.190.10 29 177 2.0E-11 T 29-03-2018 AL539_RS21070 7ef090c877983c8e659f092bd815eb8e 355 Pfam PF13343 Bacterial extracellular solute-binding protein 92 310 3.0E-34 T 29-03-2018 AL539_RS21005 a8ca590f83e1f570c9814a76196cc1aa 418 Gene3D G3DSA:3.90.170.10 266 418 2.8E-47 T 29-03-2018 AL539_RS21005 a8ca590f83e1f570c9814a76196cc1aa 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 6.4E-130 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS21005 a8ca590f83e1f570c9814a76196cc1aa 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 141.538 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS21005 a8ca590f83e1f570c9814a76196cc1aa 418 Gene3D G3DSA:3.40.440.10 172 265 8.4E-8 T 29-03-2018 AL539_RS21005 a8ca590f83e1f570c9814a76196cc1aa 418 Gene3D G3DSA:3.40.440.10 1 158 1.3E-42 T 29-03-2018 AL539_RS21005 a8ca590f83e1f570c9814a76196cc1aa 418 SMART SM00788 3 417 3.6E-173 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL539_RS21005 a8ca590f83e1f570c9814a76196cc1aa 418 SUPERFAMILY SSF52540 1 417 1.81E-121 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS24640 cdb666acecd9241810490af749d3dc8b 497 Pfam PF02447 GntP family permease 6 459 1.6E-120 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL539_RS24640 cdb666acecd9241810490af749d3dc8b 497 PIRSF PIRSF002746 1 462 3.7E-130 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL539_RS02435 ecf5053b11dd6efccfe1ec82ed752ade 407 Gene3D G3DSA:1.20.1250.20 9 204 8.8E-27 T 29-03-2018 AL539_RS02435 ecf5053b11dd6efccfe1ec82ed752ade 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL539_RS02435 ecf5053b11dd6efccfe1ec82ed752ade 407 Pfam PF07690 Major Facilitator Superfamily 16 352 1.1E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS02435 ecf5053b11dd6efccfe1ec82ed752ade 407 SUPERFAMILY SSF103473 9 392 5.49E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS02435 ecf5053b11dd6efccfe1ec82ed752ade 407 Gene3D G3DSA:1.20.1250.20 205 400 6.2E-15 T 29-03-2018 AL539_RS20515 20f424ddfa159f052a6327a48c7fdc56 447 PIRSF PIRSF006603 1 447 1.2E-82 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS20515 20f424ddfa159f052a6327a48c7fdc56 447 Pfam PF01554 MatE 22 182 3.1E-20 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS20515 20f424ddfa159f052a6327a48c7fdc56 447 Pfam PF01554 MatE 241 398 3.7E-17 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS20515 20f424ddfa159f052a6327a48c7fdc56 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 403 7.9E-46 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS15510 6e58a602cd72622c4d32e7b0bd5f207e 121 Gene3D G3DSA:3.20.20.450 1 113 1.7E-28 T 29-03-2018 IPR001633 EAL domain AL539_RS15510 6e58a602cd72622c4d32e7b0bd5f207e 121 SUPERFAMILY SSF141868 2 109 6.02E-28 T 29-03-2018 IPR001633 EAL domain AL539_RS15510 6e58a602cd72622c4d32e7b0bd5f207e 121 Pfam PF00563 EAL domain 2 100 2.2E-23 T 29-03-2018 IPR001633 EAL domain AL539_RS01195 d5f76083736997a0cb209bc4946b1dc1 216 Pfam PF08900 Domain of unknown function (DUF1845) 69 162 8.9E-5 T 29-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 AL539_RS21305 bf44e9b25e74f7e5421aeab09fbca491 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 112 2.6E-5 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS21305 bf44e9b25e74f7e5421aeab09fbca491 118 Gene3D G3DSA:3.10.180.10 1 118 4.4E-14 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS21305 bf44e9b25e74f7e5421aeab09fbca491 118 SUPERFAMILY SSF54593 6 116 2.11E-19 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS03205 09b1db643187e20e58f3f81e95b4ff6b 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.3E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS03205 09b1db643187e20e58f3f81e95b4ff6b 163 SUPERFAMILY SSF54523 7 123 2.75E-12 T 29-03-2018 AL539_RS03205 09b1db643187e20e58f3f81e95b4ff6b 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 1.2E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS03205 09b1db643187e20e58f3f81e95b4ff6b 163 Gene3D G3DSA:3.30.700.10 7 163 7.7E-13 T 29-03-2018 AL539_RS02450 9aa5192fb05a94c34c9d260c5da69921 171 Pfam PF01863 Protein of unknown function DUF45 94 150 3.2E-10 T 29-03-2018 IPR002725 Protein of unknown function DUF45 AL539_RS04595 bf10a3a987d6fd2237c671da2a2631a9 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 1.9E-61 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL539_RS04595 bf10a3a987d6fd2237c671da2a2631a9 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 1.3E-53 T 29-03-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AL539_RS04595 bf10a3a987d6fd2237c671da2a2631a9 238 Gene3D G3DSA:3.40.50.1360 1 238 3.8E-65 T 29-03-2018 AL539_RS04595 bf10a3a987d6fd2237c671da2a2631a9 238 SUPERFAMILY SSF100950 3 237 5.34E-61 T 29-03-2018 AL539_RS24250 257c259787209be42289565b7d60354d 438 Pfam PF01266 FAD dependent oxidoreductase 33 390 6.7E-33 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS24250 257c259787209be42289565b7d60354d 438 Gene3D G3DSA:3.50.50.60 20 399 1.8E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24250 257c259787209be42289565b7d60354d 438 SUPERFAMILY SSF51905 32 254 1.08E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS24250 257c259787209be42289565b7d60354d 438 SUPERFAMILY SSF51905 346 397 1.08E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS00515 c8bfbbfb5baf4cd69a176a0d44c2e344 320 Gene3D G3DSA:3.90.226.10 61 305 2.0E-34 T 29-03-2018 AL539_RS00515 c8bfbbfb5baf4cd69a176a0d44c2e344 320 Pfam PF01343 Peptidase family S49 139 280 2.8E-33 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL539_RS00515 c8bfbbfb5baf4cd69a176a0d44c2e344 320 SUPERFAMILY SSF52096 212 272 3.02E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS00515 c8bfbbfb5baf4cd69a176a0d44c2e344 320 SUPERFAMILY SSF52096 59 183 3.02E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AL539_RS00515 c8bfbbfb5baf4cd69a176a0d44c2e344 320 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 73 277 5.7E-47 T 29-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AL539_RS09230 e582e20e8ea14a34a1275a698fe6138e 243 SUPERFAMILY SSF75217 75 242 1.88E-53 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AL539_RS09230 e582e20e8ea14a34a1275a698fe6138e 243 Pfam PF04452 RNA methyltransferase 20 236 1.0E-75 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS09230 e582e20e8ea14a34a1275a698fe6138e 243 Gene3D G3DSA:3.40.1280.10 74 243 1.0E-57 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_RS09230 e582e20e8ea14a34a1275a698fe6138e 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 3.9E-86 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS09230 e582e20e8ea14a34a1275a698fe6138e 243 PIRSF PIRSF015601 2 242 8.8E-58 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AL539_RS09230 e582e20e8ea14a34a1275a698fe6138e 243 Gene3D G3DSA:2.40.240.20 1 73 2.9E-19 T 29-03-2018 AL539_RS09230 e582e20e8ea14a34a1275a698fe6138e 243 SUPERFAMILY SSF88697 2 71 6.46E-17 T 29-03-2018 IPR015947 PUA-like domain AL539_RS17470 186998b9ea1300f7c2b408ab264843a5 519 Pfam PF04293 SpoVR like protein 26 456 6.1E-177 T 29-03-2018 IPR007390 Sporulation stage V, protein R AL539_RS04650 a5ed049348c2f0baa6245fe518055d73 302 Gene3D G3DSA:3.40.190.10 80 188 2.3E-6 T 29-03-2018 AL539_RS04650 a5ed049348c2f0baa6245fe518055d73 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.3E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS04650 a5ed049348c2f0baa6245fe518055d73 302 SUPERFAMILY SSF46785 4 81 8.71E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS04650 a5ed049348c2f0baa6245fe518055d73 302 Gene3D G3DSA:3.40.190.10 189 263 2.6E-6 T 29-03-2018 AL539_RS04650 a5ed049348c2f0baa6245fe518055d73 302 SUPERFAMILY SSF53850 95 278 6.15E-16 T 29-03-2018 AL539_RS04650 a5ed049348c2f0baa6245fe518055d73 302 Pfam PF03466 LysR substrate binding domain 95 259 1.4E-15 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS04650 a5ed049348c2f0baa6245fe518055d73 302 Gene3D G3DSA:1.10.10.10 1 79 4.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20380 4feb8da6f298e30394b37eecab3b4b6c 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 3.4E-26 T 29-03-2018 IPR014175 Conserved hypothetical protein CHP02808 AL539_RS20380 4feb8da6f298e30394b37eecab3b4b6c 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 8.4E-26 T 29-03-2018 IPR014175 Conserved hypothetical protein CHP02808 AL539_RS02220 d7cd5096cbd029ffec1f464e395269ff 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 8.0E-18 T 29-03-2018 AL539_RS02220 d7cd5096cbd029ffec1f464e395269ff 153 Pfam PF04191 Phospholipid methyltransferase 40 142 5.3E-13 T 29-03-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AL539_RS21330 e6a61ffb652503a218220ca1e3b06846 467 TIGRFAM TIGR00908 2A0305: ethanolamine permease 10 450 1.6E-147 T 29-03-2018 IPR004757 Ethanolamine permease AL539_RS21330 e6a61ffb652503a218220ca1e3b06846 467 Pfam PF13520 Amino acid permease 24 409 4.0E-39 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS21330 e6a61ffb652503a218220ca1e3b06846 467 PIRSF PIRSF006060 1 464 7.1E-66 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AL539_RS16460 5db888065ee24994f11bb631420dc5a4 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 3.0E-51 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AL539_RS16460 5db888065ee24994f11bb631420dc5a4 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 135 2.1E-12 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_RS16460 5db888065ee24994f11bb631420dc5a4 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL539_RS16460 5db888065ee24994f11bb631420dc5a4 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AL539_RS15455 40e94d84b8af988c854c3c1258b80106 203 Pfam PF09335 SNARE associated Golgi protein 37 157 7.1E-21 T 29-03-2018 IPR032816 SNARE associated Golgi protein AL539_RS23945 02cc37543d5b328ed57a4eb65a04500a 91 Gene3D G3DSA:3.40.630.30 1 91 3.3E-14 T 29-03-2018 AL539_RS23945 02cc37543d5b328ed57a4eb65a04500a 91 SUPERFAMILY SSF55729 1 90 1.19E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS23945 02cc37543d5b328ed57a4eb65a04500a 91 Pfam PF14542 GCN5-related N-acetyl-transferase 14 88 3.7E-20 T 29-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AL539_RS21435 34a3a2204fb2fe95430379cd4257101d 182 Pfam PF10135 Rod binding protein 54 104 2.9E-11 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal AL539_RS03475 f9b51f23b533cdd969aa013001f04ba3 271 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 3.5E-24 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL539_RS19515 7b707916214edae2278649771c619dc9 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 6.3E-24 T 29-03-2018 IPR025411 Domain of unknown function DUF4136 AL539_RS17430 e720ecda22207e8136487b40e6844d44 235 SUPERFAMILY SSF52540 4 225 7.66E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS17430 e720ecda22207e8136487b40e6844d44 235 Pfam PF00005 ABC transporter 24 172 1.4E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS17430 e720ecda22207e8136487b40e6844d44 235 SMART SM00382 33 221 1.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS17430 e720ecda22207e8136487b40e6844d44 235 Gene3D G3DSA:3.40.50.300 1 230 6.2E-62 T 29-03-2018 AL539_RS17430 e720ecda22207e8136487b40e6844d44 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.1E-110 T 29-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 AL539_RS17430 e720ecda22207e8136487b40e6844d44 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL539_RS20465 083999356e53819d9ec76ab8d489688f 345 PIRSF PIRSF029594 8 345 1.4E-136 T 29-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 AL539_RS20465 083999356e53819d9ec76ab8d489688f 345 Pfam PF11168 Protein of unknown function (DUF2955) 15 154 3.5E-52 T 29-03-2018 IPR022604 Protein of unknown function DUF2955 AL539_RS01435 47ee63f03c19a2d14c8e5ec1696cf714 61 Gene3D G3DSA:1.20.58.410 2 61 1.7E-4 T 29-03-2018 AL539_RS19080 c3f0289212cb30df87a90908985a37dd 156 Pfam PF08808 RES domain 2 151 8.4E-26 T 29-03-2018 IPR014914 RES domain AL539_RS19080 c3f0289212cb30df87a90908985a37dd 156 SMART SM00953 15 143 2.1E-15 T 29-03-2018 IPR014914 RES domain AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 9 165 34.618 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 Pfam PF01467 Cytidylyltransferase-like 12 140 6.9E-21 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 9 27 3.7E-48 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 56 80 3.7E-48 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 92 108 3.7E-48 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 27 48 3.7E-48 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 119 141 3.7E-48 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 18 75 0.002 T 29-03-2018 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 SUPERFAMILY SSF52374 11 160 6.7E-43 T 29-03-2018 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 11 67 3.4E-18 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 11 163 6.6E-58 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL539_RS13190 22d7e6a1400d1954510fc28320b62973 166 Gene3D G3DSA:3.40.50.620 1 165 1.0E-33 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS04355 feb520eed67c74c206ab8ad83e503963 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 3.0E-48 T 29-03-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 AL539_RS04355 feb520eed67c74c206ab8ad83e503963 399 Gene3D G3DSA:1.20.58.400 63 381 0.0027 T 29-03-2018 AL539_RS01120 aa42dc5df6b5da55eb7941b19102e107 296 Gene3D G3DSA:3.40.50.150 2 74 3.2E-5 T 29-03-2018 AL539_RS01120 aa42dc5df6b5da55eb7941b19102e107 296 SUPERFAMILY SSF53335 79 213 2.99E-9 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS01120 aa42dc5df6b5da55eb7941b19102e107 296 Gene3D G3DSA:3.40.50.150 75 283 9.4E-9 T 29-03-2018 AL539_RS17915 836a281afd6ad739e0e371f6d8bc9dc2 264 Gene3D G3DSA:1.25.40.10 1 86 1.5E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS17915 836a281afd6ad739e0e371f6d8bc9dc2 264 Pfam PF07024 ImpE protein 138 257 7.8E-35 T 29-03-2018 IPR009211 Predicted virulence protein, SciE type AL539_RS17915 836a281afd6ad739e0e371f6d8bc9dc2 264 PIRSF PIRSF029288 1 263 6.6E-87 T 29-03-2018 IPR009211 Predicted virulence protein, SciE type AL539_RS17915 836a281afd6ad739e0e371f6d8bc9dc2 264 SUPERFAMILY SSF144059 3 257 3.01E-83 T 29-03-2018 AL539_RS01995 fb3c956337e673747e1177da41536bb9 223 SMART SM00382 30 218 1.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AL539_RS01995 fb3c956337e673747e1177da41536bb9 223 Pfam PF00005 ABC transporter 21 167 4.2E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL539_RS01995 fb3c956337e673747e1177da41536bb9 223 SUPERFAMILY SSF52540 1 217 1.11E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01995 fb3c956337e673747e1177da41536bb9 223 Gene3D G3DSA:3.40.50.300 1 221 8.3E-54 T 29-03-2018 AL539_RS12035 3159618a56fab9de177d6636e02aa3ea 194 Pfam PF11355 Protein of unknown function (DUF3157) 2 193 1.8E-74 T 29-03-2018 IPR021501 Protein of unknown function DUF3157 AL539_RS01240 9a2cb27958acabcb6aced2dc97d2824a 330 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 320 5.2E-81 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS20725 06696047ed83a7f513d2ce4ee2755914 143 PIRSF PIRSF028777 1 138 4.0E-51 T 29-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 AL539_RS20725 06696047ed83a7f513d2ce4ee2755914 143 Pfam PF03733 Inner membrane component domain 4 54 2.2E-14 T 29-03-2018 IPR005185 Inner membrane component domain AL539_RS20725 06696047ed83a7f513d2ce4ee2755914 143 Pfam PF03733 Inner membrane component domain 76 126 2.1E-18 T 29-03-2018 IPR005185 Inner membrane component domain AL539_RS00020 59985b371c58d22a201d5ef504919b8f 171 Gene3D G3DSA:2.10.109.10 9 171 1.0E-13 T 29-03-2018 AL539_RS00020 59985b371c58d22a201d5ef504919b8f 171 Pfam PF10502 Signal peptidase, peptidase S26 80 170 9.5E-14 T 29-03-2018 IPR019533 Peptidase S26 AL539_RS00020 59985b371c58d22a201d5ef504919b8f 171 SUPERFAMILY SSF51306 59 171 4.29E-19 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_RS04215 5d6039a5df3901bd7717f26b506f2943 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 360 1.2E-72 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL539_RS04215 5d6039a5df3901bd7717f26b506f2943 389 Gene3D G3DSA:2.40.50.100 57 114 1.1E-18 T 29-03-2018 AL539_RS04215 5d6039a5df3901bd7717f26b506f2943 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 278 6.2E-19 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL539_RS04215 5d6039a5df3901bd7717f26b506f2943 389 Gene3D G3DSA:2.40.50.100 162 294 1.2E-5 T 29-03-2018 AL539_RS04215 5d6039a5df3901bd7717f26b506f2943 389 Gene3D G3DSA:1.10.287.470 115 161 6.6E-6 T 29-03-2018 AL539_RS04215 5d6039a5df3901bd7717f26b506f2943 389 SUPERFAMILY SSF111369 48 284 2.88E-52 T 29-03-2018 AL539_RS17940 77d019d5bb977bc45941f9d6f0ea7f1f 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 5.0E-28 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AL539_RS17940 77d019d5bb977bc45941f9d6f0ea7f1f 159 SUPERFAMILY SSF141452 4 157 9.68E-36 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AL539_RS17940 77d019d5bb977bc45941f9d6f0ea7f1f 159 Gene3D G3DSA:2.30.110.20 2 159 1.1E-34 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AL539_RS13410 df790b5cb19745b632b5feedfe75406a 115 SUPERFAMILY SSF55331 2 115 3.46E-34 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily AL539_RS13410 df790b5cb19745b632b5feedfe75406a 115 Gene3D G3DSA:3.30.429.10 1 115 3.1E-31 T 29-03-2018 AL539_RS13410 df790b5cb19745b632b5feedfe75406a 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 3.7E-6 T 29-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AL539_RS03060 9a167f6e9f9c744b7170b30339d9f4c3 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 1.7E-23 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL539_RS03060 9a167f6e9f9c744b7170b30339d9f4c3 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 195 1.5E-11 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AL539_RS03060 9a167f6e9f9c744b7170b30339d9f4c3 346 Gene3D G3DSA:3.40.50.720 1 136 2.1E-36 T 29-03-2018 AL539_RS03060 9a167f6e9f9c744b7170b30339d9f4c3 346 Gene3D G3DSA:3.30.360.10 137 346 2.5E-42 T 29-03-2018 AL539_RS03060 9a167f6e9f9c744b7170b30339d9f4c3 346 SUPERFAMILY SSF51735 4 204 2.7E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS09460 a7c360fd5ff677d974c64000cf6cd3af 375 Pfam PF03235 Protein of unknown function DUF262 63 193 2.6E-17 T 29-03-2018 IPR004919 Domain of unknown function DUF262 AL539_RS09460 a7c360fd5ff677d974c64000cf6cd3af 375 Gene3D G3DSA:3.90.920.20 296 374 9.1E-4 T 29-03-2018 AL539_RS09605 a7c360fd5ff677d974c64000cf6cd3af 375 Pfam PF03235 Protein of unknown function DUF262 63 193 2.6E-17 T 29-03-2018 IPR004919 Domain of unknown function DUF262 AL539_RS09605 a7c360fd5ff677d974c64000cf6cd3af 375 Gene3D G3DSA:3.90.920.20 296 374 9.1E-4 T 29-03-2018 AL539_RS14990 39ad921b750b8755c22c3999bf68e310 90 SUPERFAMILY SSF54403 5 56 1.11E-7 T 29-03-2018 AL539_RS24945 ccbed99954a30ed105031e25d06c123f 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 2.1E-29 T 29-03-2018 IPR010699 Protein of unknown function DUF1275 AL539_RS22195 4e655c8177beeb3bb8f4b588e89ab96b 156 Gene3D G3DSA:3.40.630.30 95 151 1.7E-15 T 29-03-2018 AL539_RS22195 4e655c8177beeb3bb8f4b588e89ab96b 156 Pfam PF00583 Acetyltransferase (GNAT) family 35 145 7.2E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS22195 4e655c8177beeb3bb8f4b588e89ab96b 156 SUPERFAMILY SSF55729 1 153 1.01E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS22195 4e655c8177beeb3bb8f4b588e89ab96b 156 Gene3D G3DSA:3.40.630.30 1 94 3.3E-13 T 29-03-2018 AL539_RS00585 49dd2c3eda0113429ba9522b1487b3dc 191 SUPERFAMILY SSF160930 7 168 1.09E-31 T 29-03-2018 AL539_RS00585 49dd2c3eda0113429ba9522b1487b3dc 191 Pfam PF05280 Flagellar transcriptional activator (FlhC) 14 179 6.5E-12 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AL539_RS10565 fb86e6e0dbc1831f7afd6d3f59c55e03 503 Pfam PF03806 AbgT putative transporter family 15 502 7.8E-158 T 29-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL539_RS00015 dde5d46d76cad6b64600332dea4bfac8 418 Gene3D G3DSA:3.40.30.10 42 211 9.2E-4 T 29-03-2018 AL539_RS00015 dde5d46d76cad6b64600332dea4bfac8 418 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 103 190 1.1E-17 T 29-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.9E-129 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.341 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 Gene3D G3DSA:3.40.50.450 1 209 2.0E-84 T 29-03-2018 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PIRSF PIRSF000532 1 320 1.1E-126 T 29-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 Pfam PF00365 Phosphofructokinase 4 276 8.6E-109 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 Gene3D G3DSA:3.40.50.450 210 309 1.8E-8 T 29-03-2018 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 SUPERFAMILY SSF53784 3 310 8.5E-112 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.4E-83 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS10880 d2b713a9df4650780950a9d017101d8b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 29-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL539_RS15305 e68d807856b2f9c7b7030cd46418b563 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.7E-56 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL539_RS15305 e68d807856b2f9c7b7030cd46418b563 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.1E-69 T 29-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL539_RS15305 e68d807856b2f9c7b7030cd46418b563 127 Gene3D G3DSA:3.90.1010.10 1 127 2.2E-51 T 29-03-2018 AL539_RS15305 e68d807856b2f9c7b7030cd46418b563 127 SUPERFAMILY SSF82649 1 125 6.54E-48 T 29-03-2018 AL539_RS11175 bb591f175de0ef57fb01de339fb2ab7b 265 SUPERFAMILY SSF55811 63 248 9.04E-43 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AL539_RS11175 bb591f175de0ef57fb01de339fb2ab7b 265 Gene3D G3DSA:3.90.79.10 131 262 1.1E-34 T 29-03-2018 AL539_RS11175 bb591f175de0ef57fb01de339fb2ab7b 265 Pfam PF00293 NUDIX domain 137 238 2.2E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL539_RS11175 bb591f175de0ef57fb01de339fb2ab7b 265 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 262 43.449 T 29-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL539_RS11175 bb591f175de0ef57fb01de339fb2ab7b 265 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 4.7E-9 T 29-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL539_RS11175 bb591f175de0ef57fb01de339fb2ab7b 265 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL539_RS05510 c7274628ce5372eeba39d975737eb967 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 4.2E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS12705 ad85efdd87c66ec42dd41db2fd805d1b 211 Gene3D G3DSA:3.30.1050.10 9 120 7.4E-8 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS12705 ad85efdd87c66ec42dd41db2fd805d1b 211 SUPERFAMILY SSF55718 15 117 9.89E-10 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS12705 ad85efdd87c66ec42dd41db2fd805d1b 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 8.3E-23 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AL539_RS01730 0079ad21dd1a0e313f89c2a2536d047c 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 3.7E-29 T 29-03-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE AL539_RS01730 0079ad21dd1a0e313f89c2a2536d047c 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.1E-25 T 29-03-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE AL539_RS01830 0ea22a912428901d5500e839e691c2cc 286 Pfam PF03280 Proteobacterial lipase chaperone protein 88 272 3.2E-38 T 29-03-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AL539_RS01830 0ea22a912428901d5500e839e691c2cc 286 SUPERFAMILY SSF158855 34 283 9.02E-58 T 29-03-2018 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 SUPERFAMILY SSF46785 7 145 1.08E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.5E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.5E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 2.5E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.5E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 Gene3D G3DSA:1.10.10.10 15 117 7.4E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 SMART SM00347 33 134 6.1E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 Gene3D G3DSA:1.10.287.100 118 149 7.1E-4 T 29-03-2018 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 Pfam PF01047 MarR family 46 97 7.1E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL539_RS01275 9a16d12da9382bb9b52f137f0ad41f88 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_RS04330 5648ffe40fd275491cdf9bb069049a7b 171 Gene3D G3DSA:3.40.50.300 1 170 3.6E-14 T 29-03-2018 AL539_RS04330 5648ffe40fd275491cdf9bb069049a7b 171 SUPERFAMILY SSF52540 3 168 2.24E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00825 dc44a7bf505e158eebf7a16d96e0d96f 255 Gene3D G3DSA:3.20.20.120 5 178 0.048 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AL539_RS24110 caa94b3e729af628d2383b8ff1c39a64 547 Gene3D G3DSA:2.60.40.10 111 378 0.011 T 29-03-2018 IPR013783 Immunoglobulin-like fold AL539_RS24110 caa94b3e729af628d2383b8ff1c39a64 547 Pfam PF13584 Oxygen tolerance 16 468 3.3E-80 T 29-03-2018 IPR025738 Aerotolerance-related protein BatD AL539_RS10255 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Gene3D G3DSA:3.30.70.60 1 100 3.0E-31 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL539_RS10255 0434b8f5a05bcdaa7fd0ca134c8e4546 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.9E-39 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10255 0434b8f5a05bcdaa7fd0ca134c8e4546 129 SUPERFAMILY SSF54995 1 103 2.09E-38 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10255 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS10255 0434b8f5a05bcdaa7fd0ca134c8e4546 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 29-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL539_RS10255 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 29-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL539_RS24335 500e8e284be44b89685a99a149451de9 343 Pfam PF13692 Glycosyl transferases group 1 182 310 1.3E-12 T 29-03-2018 AL539_RS24335 500e8e284be44b89685a99a149451de9 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 158 3.4E-11 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AL539_RS24335 500e8e284be44b89685a99a149451de9 343 SUPERFAMILY SSF53756 10 317 3.9E-36 T 29-03-2018 AL539_RS24335 500e8e284be44b89685a99a149451de9 343 Gene3D G3DSA:3.40.50.2000 12 176 2.6E-4 T 29-03-2018 AL539_RS24335 500e8e284be44b89685a99a149451de9 343 Gene3D G3DSA:3.40.50.2000 177 321 2.0E-18 T 29-03-2018 AL539_RS02830 da49d2d22eb465e8f9deef15c3338d5a 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 6.3E-21 T 29-03-2018 IPR009305 Protein of unknown function DUF962 AL539_RS23790 0e10b3e837bc02b9b0b940d17fc42c0e 127 Gene3D G3DSA:3.10.180.10 3 127 6.4E-29 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS23790 0e10b3e837bc02b9b0b940d17fc42c0e 127 SUPERFAMILY SSF54593 1 126 1.61E-32 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS23790 0e10b3e837bc02b9b0b940d17fc42c0e 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.2E-20 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS01420 ee759f6945e43eaef335d2945eca5cdb 191 Pfam PF11140 Protein of unknown function (DUF2913) 6 184 6.3E-17 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 AL539_RS07940 34a231ebe8582bfc66784fcfc6acaaf8 334 Pfam PF02424 ApbE family 31 310 1.3E-85 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL539_RS07940 34a231ebe8582bfc66784fcfc6acaaf8 334 SUPERFAMILY SSF143631 24 332 3.92E-101 T 29-03-2018 IPR003374 ApbE-like domain AL539_RS07940 34a231ebe8582bfc66784fcfc6acaaf8 334 PIRSF PIRSF006268 1 334 5.9E-95 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL539_RS07940 34a231ebe8582bfc66784fcfc6acaaf8 334 Gene3D G3DSA:3.10.520.10 29 321 1.7E-62 T 29-03-2018 AL539_RS24395 f04ce3f1c9ea9badb4048cd5d4c282a3 296 SUPERFAMILY SSF161098 10 296 1.5E-69 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24395 f04ce3f1c9ea9badb4048cd5d4c282a3 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 285 8.3E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24395 f04ce3f1c9ea9badb4048cd5d4c282a3 296 Gene3D G3DSA:1.10.3720.10 1 283 2.9E-46 T 29-03-2018 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 SMART SM00283 156 417 3.3E-63 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 SUPERFAMILY SSF58104 109 418 2.35E-73 T 29-03-2018 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 204 384 1.3E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 Gene3D G3DSA:1.10.287.950 191 418 2.3E-51 T 29-03-2018 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 Gene3D G3DSA:1.10.287.950 46 190 7.1E-5 T 29-03-2018 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 1.5E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 1.5E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS14390 30be893ce8aeb787eadeb13f41733b57 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 1.5E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AL539_RS21860 1b56e34a3d8bd02e61f1ae0c627a1ced 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 3.9E-104 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL539_RS21860 1b56e34a3d8bd02e61f1ae0c627a1ced 436 Pfam PF05525 Branched-chain amino acid transport protein 5 422 9.8E-114 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL539_RS09770 8990934139f499e32baccd304fecf7dd 101 SUPERFAMILY SSF52794 1 101 7.85E-37 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS09770 8990934139f499e32baccd304fecf7dd 101 Gene3D G3DSA:3.40.50.2300 2 101 4.0E-38 T 29-03-2018 AL539_RS09770 8990934139f499e32baccd304fecf7dd 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 2.2E-25 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL539_RS06030 411f064335f40b50ac03e2badb78c891 187 Pfam PF04279 Intracellular septation protein A 1 174 2.1E-67 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL539_RS06030 411f064335f40b50ac03e2badb78c891 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.531 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL539_RS06030 411f064335f40b50ac03e2badb78c891 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 2.8E-63 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL539_RS17695 7ee297e8255bae929e2f7cf250f2f9ce 261 Gene3D G3DSA:3.40.50.620 75 213 6.6E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS17695 7ee297e8255bae929e2f7cf250f2f9ce 261 Pfam PF02698 DUF218 domain 80 242 3.2E-28 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AL539_RS16045 d826a2d63a7315040d0f2d223d9fa94d 506 Gene3D G3DSA:1.10.10.10 7 117 7.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16045 d826a2d63a7315040d0f2d223d9fa94d 506 SUPERFAMILY SSF46894 9 112 2.55E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL539_RS16045 d826a2d63a7315040d0f2d223d9fa94d 506 SMART SM00862 31 111 1.4E-6 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS16045 d826a2d63a7315040d0f2d223d9fa94d 506 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 4.2E-11 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL539_RS20185 afaa31ba782ec11588dac233ba3ecb01 145 Pfam PF00989 PAS fold 16 134 1.8E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 AL539_RS20185 afaa31ba782ec11588dac233ba3ecb01 145 Gene3D G3DSA:3.30.450.20 9 139 2.6E-12 T 29-03-2018 AL539_RS20185 afaa31ba782ec11588dac233ba3ecb01 145 SUPERFAMILY SSF55785 10 126 1.74E-11 T 29-03-2018 IPR000014 PAS domain AL539_RS13310 7ffd90b462b8e6f316d135daae54c92c 330 Gene3D G3DSA:3.30.1890.10 50 243 4.9E-40 T 29-03-2018 AL539_RS13310 7ffd90b462b8e6f316d135daae54c92c 330 Pfam PF02706 Chain length determinant protein 23 125 2.2E-19 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL539_RS13310 7ffd90b462b8e6f316d135daae54c92c 330 Pfam PF13807 G-rich domain on putative tyrosine kinase 251 315 3.5E-9 T 29-03-2018 IPR032807 Tyrosine kinase, G-rich domain AL539_RS21885 eaa1aad8e69db9ff421f3746c1a14740 678 Gene3D G3DSA:3.40.190.10 29 655 1.5E-6 T 29-03-2018 AL539_RS21885 eaa1aad8e69db9ff421f3746c1a14740 678 SUPERFAMILY SSF63829 364 403 9.81E-6 T 29-03-2018 AL539_RS21885 eaa1aad8e69db9ff421f3746c1a14740 678 SUPERFAMILY SSF63829 467 641 9.81E-6 T 29-03-2018 AL539_RS21885 eaa1aad8e69db9ff421f3746c1a14740 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 9.7E-152 T 29-03-2018 IPR008557 Protein of unknown function DUF839 AL539_RS16910 648bc57174b8572daddf630769fe3ea7 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 4.5E-34 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL539_RS16910 648bc57174b8572daddf630769fe3ea7 87 Gene3D G3DSA:3.30.1070.10 1 84 3.6E-28 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL539_RS16910 648bc57174b8572daddf630769fe3ea7 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.9E-24 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL539_RS16910 648bc57174b8572daddf630769fe3ea7 87 SUPERFAMILY SSF55229 33 86 6.28E-17 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL539_RS16910 648bc57174b8572daddf630769fe3ea7 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.907 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL539_RS03420 871720332cceeb1afc500dec8e083a89 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.4E-21 T 29-03-2018 IPR025990 Cysteine-rich CPXCG protein AL539_RS03420 871720332cceeb1afc500dec8e083a89 64 PIRSF PIRSF037225 1 64 8.3E-24 T 29-03-2018 IPR017143 Uncharacterised conserved protein UCP037225 AL539_RS13060 83152797b01128540f28bcc657dcc727 453 PIRSF PIRSF037714 2 453 6.1E-173 T 29-03-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL539_RS13060 83152797b01128540f28bcc657dcc727 453 Gene3D G3DSA:1.20.1640.10 175 446 0.0021 T 29-03-2018 AL539_RS13060 83152797b01128540f28bcc657dcc727 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.4E-28 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.7E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.7E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.7E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.7E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.7E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.7E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 1.5E-266 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 Pfam PF00771 FHIPEP family 32 689 4.4E-270 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 29-03-2018 IPR025505 FHIPEP conserved site AL539_RS07335 6d8efd3dc5c5ee6285256a470bfca981 699 PIRSF PIRSF005419 10 699 2.8E-253 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL539_RS02025 ccb0cfffa28bd88377c72b110f32134f 400 Gene3D G3DSA:3.40.50.720 25 200 1.6E-4 T 29-03-2018 AL539_RS02025 ccb0cfffa28bd88377c72b110f32134f 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS02025 ccb0cfffa28bd88377c72b110f32134f 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 7.6E-113 T 29-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS02025 ccb0cfffa28bd88377c72b110f32134f 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.4E-31 T 29-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS02025 ccb0cfffa28bd88377c72b110f32134f 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.406 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL539_RS19795 b4aaa395791522bee5efc582c9bb2b40 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 4.3E-39 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL539_RS19795 b4aaa395791522bee5efc582c9bb2b40 355 Gene3D G3DSA:1.10.3470.10 41 334 1.4E-35 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS16555 851efba0e8c58b05069ac277324591e8 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.126 T 29-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AL539_RS16555 851efba0e8c58b05069ac277324591e8 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 2.0E-38 T 29-03-2018 AL539_RS09795 df69eaab753479d9ed911896c62dcda0 159 Pfam PF06271 RDD family 9 149 4.3E-22 T 29-03-2018 IPR010432 RDD AL539_RS14020 366efdb608c948d5a855ad72fcefa2ea 265 Pfam PF08239 Bacterial SH3 domain 132 183 1.5E-12 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AL539_RS14020 366efdb608c948d5a855ad72fcefa2ea 265 Gene3D G3DSA:2.40.50.110 99 187 1.9E-11 T 29-03-2018 AL539_RS09970 3120f4a2bee373e501921c2c10c32f35 447 SUPERFAMILY SSF111283 12 447 1.31E-127 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS09970 3120f4a2bee373e501921c2c10c32f35 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 5.9E-60 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS09970 3120f4a2bee373e501921c2c10c32f35 447 Gene3D G3DSA:3.30.2290.10 1 233 1.1E-52 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL539_RS23310 f03cdfca0c5f4de14f66d0dd0fe1f230 245 Pfam PF07670 Nucleoside recognition 85 179 6.8E-11 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS18850 5db1a2e6a8b4b3da126a62dd79da1c92 236 SUPERFAMILY SSF69318 72 157 8.89E-5 T 29-03-2018 AL539_RS05525 16888def79bb90738b768ae07ba933ca 59 Pfam PF11665 Protein of unknown function (DUF3265) 21 48 1.2E-8 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS21545 1d5a92670f8ccab055dadb4faaa79278 374 Pfam PF00246 Zinc carboxypeptidase 126 341 4.0E-24 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL539_RS21545 1d5a92670f8ccab055dadb4faaa79278 374 Gene3D G3DSA:3.40.630.10 100 374 2.8E-55 T 29-03-2018 AL539_RS21545 1d5a92670f8ccab055dadb4faaa79278 374 SUPERFAMILY SSF53187 106 372 2.27E-64 T 29-03-2018 AL539_RS21545 1d5a92670f8ccab055dadb4faaa79278 374 SMART SM00631 112 354 2.7E-4 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL539_RS17865 07aa4b3174dd3247c610272920d3ff6e 203 SUPERFAMILY SSF101327 15 189 5.62E-31 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS17865 07aa4b3174dd3247c610272920d3ff6e 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 1.0E-53 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS17865 07aa4b3174dd3247c610272920d3ff6e 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 192 5.5E-36 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 1.5E-111 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 SUPERFAMILY SSF69279 12 195 2.49E-44 T 29-03-2018 AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 SUPERFAMILY SSF69279 213 372 4.42E-9 T 29-03-2018 AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 1.1E-170 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 SUPERFAMILY SSF69349 450 602 5.57E-36 T 29-03-2018 AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 Gene3D G3DSA:2.40.50.260 372 488 3.7E-36 T 29-03-2018 AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 Gene3D G3DSA:3.55.50.10 109 199 1.3E-27 T 29-03-2018 AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 334 3.6E-72 T 29-03-2018 AL539_RS17945 c8e5d8027d0def275589bc85ed5caeca 611 SUPERFAMILY SSF69255 372 460 7.59E-33 T 29-03-2018 AL539_RS14200 7452ce3fd1c89640c3930d57468286eb 128 SUPERFAMILY SSF46785 53 107 7.97E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14200 7452ce3fd1c89640c3930d57468286eb 128 Gene3D G3DSA:1.10.10.10 39 126 7.2E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS03970 a754781fac2b8465bfce5c24ea30ec9d 165 Gene3D G3DSA:3.10.129.10 5 157 2.0E-14 T 29-03-2018 AL539_RS03970 a754781fac2b8465bfce5c24ea30ec9d 165 Pfam PF14539 Domain of unknown function (DUF4442) 18 105 2.8E-10 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 AL539_RS03970 a754781fac2b8465bfce5c24ea30ec9d 165 SUPERFAMILY SSF54637 12 157 8.21E-16 T 29-03-2018 IPR029069 HotDog domain AL539_RS22615 740f967ceaf00b06be3008b1d63aacfc 360 Pfam PF01098 Cell cycle protein 14 355 4.9E-99 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AL539_RS22615 740f967ceaf00b06be3008b1d63aacfc 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 2.7E-116 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AL539_RS22635 53a25813d07ab15ba0419192398c0a04 251 Gene3D G3DSA:3.40.190.10 16 251 9.5E-18 T 29-03-2018 AL539_RS22635 53a25813d07ab15ba0419192398c0a04 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 1.9E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL539_RS22635 53a25813d07ab15ba0419192398c0a04 251 SUPERFAMILY SSF53850 28 250 1.19E-21 T 29-03-2018 AL539_RS23545 7e0d2ea197eb2516c05140a85f0032be 152 Pfam PF00583 Acetyltransferase (GNAT) family 27 129 4.8E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS23545 7e0d2ea197eb2516c05140a85f0032be 152 SUPERFAMILY SSF55729 10 145 4.29E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS23545 7e0d2ea197eb2516c05140a85f0032be 152 Gene3D G3DSA:3.40.630.30 1 152 3.7E-26 T 29-03-2018 AL539_RS26115 66ee8f2eddb2cc8f3bd300d14a243e0b 397 Pfam PF00498 FHA domain 32 101 4.5E-15 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL539_RS26115 66ee8f2eddb2cc8f3bd300d14a243e0b 397 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 394 7.5E-110 T 29-03-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AL539_RS26115 66ee8f2eddb2cc8f3bd300d14a243e0b 397 SMART SM00240 31 82 1.9E-8 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL539_RS26115 66ee8f2eddb2cc8f3bd300d14a243e0b 397 SUPERFAMILY SSF49879 28 109 4.78E-21 T 29-03-2018 IPR008984 SMAD/FHA domain GO:0005515 AL539_RS26115 66ee8f2eddb2cc8f3bd300d14a243e0b 397 Gene3D G3DSA:2.60.200.20 12 125 6.4E-19 T 29-03-2018 AL539_RS00735 ad495ea5bf35e6ad47e1609905a05c80 137 Gene3D G3DSA:2.10.109.10 14 128 4.5E-15 T 29-03-2018 AL539_RS00735 ad495ea5bf35e6ad47e1609905a05c80 137 SUPERFAMILY SSF51306 3 124 1.74E-23 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_RS00735 ad495ea5bf35e6ad47e1609905a05c80 137 Pfam PF00717 Peptidase S24-like 46 88 9.7E-8 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_RS23020 f85b5d39f2ebce8f3ab2282daba42dda 610 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 556 4.3E-14 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain AL539_RS23020 f85b5d39f2ebce8f3ab2282daba42dda 610 Pfam PF04183 IucA / IucC family 162 372 4.1E-33 T 29-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AL539_RS02960 c9b32ebce142be0bba26246208b92023 552 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 2.2E-168 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS02960 c9b32ebce142be0bba26246208b92023 552 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 2.6E-133 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS16110 ba71374bac692c2555e2c91782fd9e7d 179 Pfam PF04390 Lipopolysaccharide-assembly 40 159 1.9E-12 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL539_RS16110 ba71374bac692c2555e2c91782fd9e7d 179 Gene3D G3DSA:3.30.160.150 22 171 8.0E-43 T 29-03-2018 AL539_RS16110 ba71374bac692c2555e2c91782fd9e7d 179 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.923 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL539_RS02310 ac8d73b1eb713d0be4c93d1b28a205fc 263 Gene3D G3DSA:2.50.20.10 25 261 1.6E-66 T 29-03-2018 AL539_RS02310 ac8d73b1eb713d0be4c93d1b28a205fc 263 SUPERFAMILY SSF89392 107 214 5.1E-6 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_RS02310 ac8d73b1eb713d0be4c93d1b28a205fc 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 7.2E-68 T 29-03-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL539_RS17570 4d92de4ba3f0461aa509a8a665077313 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 2.5E-45 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL539_RS05005 7630e8874bdbf9830135ae77732c5825 108 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 1 108 9.0E-7 T 29-03-2018 IPR020353 mRNA interferase toxin YafO AL539_RS05005 7630e8874bdbf9830135ae77732c5825 108 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 5 106 2.7E-23 T 29-03-2018 IPR020353 mRNA interferase toxin YafO AL539_RS07020 7a9db9c31721a52ba8daa2757adfca82 368 Gene3D G3DSA:3.40.50.2300 17 333 1.0E-37 T 29-03-2018 AL539_RS07020 7a9db9c31721a52ba8daa2757adfca82 368 Pfam PF00072 Response regulator receiver domain 22 132 6.3E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS07020 7a9db9c31721a52ba8daa2757adfca82 368 SUPERFAMILY SSF52172 20 138 4.98E-35 T 29-03-2018 IPR011006 CheY-like superfamily AL539_RS07020 7a9db9c31721a52ba8daa2757adfca82 368 SMART SM00448 20 132 4.4E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL539_RS11495 247e3d67bd34fa20b76e2b90245cc80c 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 9.0E-24 T 29-03-2018 IPR019635 Protein of unknown function DUF2500 AL539_RS22005 893a9b535bea55528c41cb3464093765 390 Gene3D G3DSA:1.25.40.10 78 131 0.027 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22005 893a9b535bea55528c41cb3464093765 390 Gene3D G3DSA:1.25.40.10 132 384 3.1E-22 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22005 893a9b535bea55528c41cb3464093765 390 SUPERFAMILY SSF48452 93 229 4.14E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22005 893a9b535bea55528c41cb3464093765 390 SUPERFAMILY SSF48452 244 369 1.54E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS22005 893a9b535bea55528c41cb3464093765 390 Gene3D G3DSA:1.25.40.10 13 77 0.0029 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02500 b64abbfedbdd78cedc57fe2172099aa5 324 Gene3D G3DSA:3.30.1780.10 1 132 3.4E-33 T 29-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL539_RS02500 b64abbfedbdd78cedc57fe2172099aa5 324 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 314 1.3E-53 T 29-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL539_RS02500 b64abbfedbdd78cedc57fe2172099aa5 324 PIRSF PIRSF001439 1 321 6.4E-68 T 29-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL539_RS02500 b64abbfedbdd78cedc57fe2172099aa5 324 SUPERFAMILY SSF51735 1 315 2.08E-84 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS02500 b64abbfedbdd78cedc57fe2172099aa5 324 Gene3D G3DSA:3.40.50.720 133 302 1.1E-27 T 29-03-2018 AL539_RS21335 0d2de0469422d40812960bbbb8c6c2b4 294 PIRSF PIRSF018982 7 278 2.5E-86 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AL539_RS21335 0d2de0469422d40812960bbbb8c6c2b4 294 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 21 268 2.6E-88 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AL539_RS06175 7d5347170a2d5b4ced977eca15e7601f 404 Pfam PF12704 MacB-like periplasmic core domain 19 236 2.9E-23 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AL539_RS06175 7d5347170a2d5b4ced977eca15e7601f 404 Pfam PF02687 FtsX-like permease family 305 396 1.1E-13 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS20445 7b07ca588cd5d9fff4c4d0a162d3b86a 207 Pfam PF13649 Methyltransferase domain 54 148 5.2E-11 T 29-03-2018 AL539_RS20445 7b07ca588cd5d9fff4c4d0a162d3b86a 207 Gene3D G3DSA:3.40.50.150 2 205 4.8E-15 T 29-03-2018 AL539_RS20445 7b07ca588cd5d9fff4c4d0a162d3b86a 207 SUPERFAMILY SSF53335 41 160 5.68E-17 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS04160 a5f1fcfaaf6e00d671eccb058ab80961 172 Pfam PF00857 Isochorismatase family 5 161 6.9E-32 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL539_RS04160 a5f1fcfaaf6e00d671eccb058ab80961 172 Gene3D G3DSA:3.40.50.850 1 171 2.7E-39 T 29-03-2018 AL539_RS04160 a5f1fcfaaf6e00d671eccb058ab80961 172 SUPERFAMILY SSF52499 3 163 1.11E-42 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AL539_RS05050 019a0cca031398e18ec096b0dee66583 43 Pfam PF11665 Protein of unknown function (DUF3265) 20 43 1.1E-9 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS01530 ca9d4e21b287e7dfa6be3ae3634f2e65 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 13 183 5.8E-54 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL539_RS01530 ca9d4e21b287e7dfa6be3ae3634f2e65 235 Pfam PF13500 AAA domain 11 218 4.3E-38 T 29-03-2018 AL539_RS01530 ca9d4e21b287e7dfa6be3ae3634f2e65 235 PIRSF PIRSF006755 8 233 8.5E-78 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL539_RS01530 ca9d4e21b287e7dfa6be3ae3634f2e65 235 Gene3D G3DSA:3.40.50.300 9 226 7.1E-61 T 29-03-2018 AL539_RS01530 ca9d4e21b287e7dfa6be3ae3634f2e65 235 SUPERFAMILY SSF52540 8 222 1.82E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01530 ca9d4e21b287e7dfa6be3ae3634f2e65 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 9 219 29.625 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL539_RS09220 616c0f089041c66c6646e612ab782be2 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.147 T 29-03-2018 IPR023483 Uncharacterised protein family SprT AL539_RS09220 616c0f089041c66c6646e612ab782be2 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 1.1E-10 T 29-03-2018 IPR035240 SprT-like, zinc ribbon domain AL539_RS09220 616c0f089041c66c6646e612ab782be2 165 Pfam PF10263 SprT-like family 17 114 2.4E-18 T 29-03-2018 IPR006640 SprT-like AL539_RS09220 616c0f089041c66c6646e612ab782be2 165 SMART SM00731 11 160 5.8E-53 T 29-03-2018 IPR006640 SprT-like AL539_RS21565 0fc07e73cd60b95266adde00d2d44e89 183 SUPERFAMILY SSF56925 22 183 1.15E-17 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS21565 0fc07e73cd60b95266adde00d2d44e89 183 Gene3D G3DSA:2.40.160.20 7 183 7.0E-18 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS21565 0fc07e73cd60b95266adde00d2d44e89 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 5.0E-13 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS17595 aa79ebc3c68c4e24be7b09da67039e34 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL539_RS17595 aa79ebc3c68c4e24be7b09da67039e34 741 Gene3D G3DSA:3.40.718.10 68 367 2.9E-42 T 29-03-2018 AL539_RS17595 aa79ebc3c68c4e24be7b09da67039e34 741 Gene3D G3DSA:3.40.718.10 441 715 4.6E-43 T 29-03-2018 AL539_RS17595 aa79ebc3c68c4e24be7b09da67039e34 741 SUPERFAMILY SSF53659 5 740 0.0 T 29-03-2018 AL539_RS17595 aa79ebc3c68c4e24be7b09da67039e34 741 PIRSF PIRSF009407 1 741 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL539_RS17595 aa79ebc3c68c4e24be7b09da67039e34 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL539_RS08455 2d4ef43ddcce460b94d3a87832c3c723 209 Gene3D G3DSA:3.40.50.150 1 209 4.7E-57 T 29-03-2018 AL539_RS08455 2d4ef43ddcce460b94d3a87832c3c723 209 PIRSF PIRSF005461 1 209 1.7E-80 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AL539_RS08455 2d4ef43ddcce460b94d3a87832c3c723 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.6E-57 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL539_RS08455 2d4ef43ddcce460b94d3a87832c3c723 209 SUPERFAMILY SSF53335 30 209 5.36E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS08455 2d4ef43ddcce460b94d3a87832c3c723 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.949 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AL539_RS05865 2498d00662e4ac96a4e738b8c54528ee 170 Pfam PF13740 ACT domain 5 66 7.4E-10 T 29-03-2018 AL539_RS05865 2498d00662e4ac96a4e738b8c54528ee 170 SUPERFAMILY SSF55021 89 167 2.37E-10 T 29-03-2018 AL539_RS05865 2498d00662e4ac96a4e738b8c54528ee 170 Gene3D G3DSA:3.30.70.260 83 170 5.9E-11 T 29-03-2018 AL539_RS05865 2498d00662e4ac96a4e738b8c54528ee 170 PIRSF PIRSF028103 1 169 1.8E-40 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL539_RS05865 2498d00662e4ac96a4e738b8c54528ee 170 Gene3D G3DSA:3.30.70.260 1 72 0.059 T 29-03-2018 AL539_RS15150 a4e590e262fb3567e9f404b7a880545e 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL539_RS15150 a4e590e262fb3567e9f404b7a880545e 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 7.6E-21 T 29-03-2018 IPR032525 Peptidase family U32, C-terminal AL539_RS15150 a4e590e262fb3567e9f404b7a880545e 466 Pfam PF01136 Peptidase family U32 80 355 2.5E-96 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL539_RS15150 a4e590e262fb3567e9f404b7a880545e 466 Gene3D G3DSA:3.20.20.70 6 177 2.7E-5 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS17165 0ca8e4faee4c694f1fcbc88b62084998 204 Pfam PF03942 DTW domain 3 188 3.5E-48 T 29-03-2018 IPR005636 DTW AL539_RS17165 0ca8e4faee4c694f1fcbc88b62084998 204 SMART SM01144 1 193 1.0E-69 T 29-03-2018 IPR005636 DTW AL539_RS16305 e176d98682c8431216faf7dae775b757 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 3.4E-39 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AL539_RS16305 e176d98682c8431216faf7dae775b757 127 PIRSF PIRSF005610 1 121 1.1E-19 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AL539_RS18590 d8736020830a2144d4651fe9619fe57a 279 Gene3D G3DSA:2.60.120.330 1 279 7.6E-61 T 29-03-2018 IPR027443 Isopenicillin N synthase-like AL539_RS18590 d8736020830a2144d4651fe9619fe57a 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 2.2E-15 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL539_RS18590 d8736020830a2144d4651fe9619fe57a 279 SUPERFAMILY SSF51197 7 276 2.88E-60 T 29-03-2018 AL539_RS18590 d8736020830a2144d4651fe9619fe57a 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 94 8.1E-10 T 29-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain AL539_RS15145 2b03c5657abf9e56857358d746079c16 84 SUPERFAMILY SSF54862 4 72 8.13E-17 T 29-03-2018 AL539_RS15145 2b03c5657abf9e56857358d746079c16 84 Gene3D G3DSA:3.30.70.20 2 82 1.5E-14 T 29-03-2018 AL539_RS15145 2b03c5657abf9e56857358d746079c16 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_RS15145 2b03c5657abf9e56857358d746079c16 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.6E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_RS14175 2f1419fad383c91bf4264f521282f240 239 PIRSF PIRSF029033 1 239 2.1E-107 T 29-03-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AL539_RS14175 2f1419fad383c91bf4264f521282f240 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 4.6E-15 T 29-03-2018 IPR007497 Protein of unknown function DUF541 AL539_RS11730 15eeef19e1f4ed33e481c09a33f8a715 219 PIRSF PIRSF006324 1 214 8.8E-49 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS11730 15eeef19e1f4ed33e481c09a33f8a715 219 Pfam PF01810 LysE type translocator 16 212 2.8E-36 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS09275 8e98426ebd58f76a90a0f8bd1aa2951c 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 92 4.7E-27 T 29-03-2018 IPR005228 Conserved hypothetical protein CHP00251 AL539_RS09275 8e98426ebd58f76a90a0f8bd1aa2951c 96 SUPERFAMILY SSF69786 3 96 2.75E-32 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AL539_RS09275 8e98426ebd58f76a90a0f8bd1aa2951c 96 SMART SM01152 8 84 6.2E-39 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AL539_RS09275 8e98426ebd58f76a90a0f8bd1aa2951c 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 1.7E-25 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AL539_RS09275 8e98426ebd58f76a90a0f8bd1aa2951c 96 Gene3D G3DSA:3.30.1200.10 2 96 2.6E-30 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AL539_RS09275 8e98426ebd58f76a90a0f8bd1aa2951c 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.668 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AL539_RS16840 84946e1492ce148d2c56253b8addf989 76 Gene3D G3DSA:1.10.10.10 1 72 4.4E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16840 84946e1492ce148d2c56253b8addf989 76 SUPERFAMILY SSF46785 1 55 3.87E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS16840 84946e1492ce148d2c56253b8addf989 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 3.1E-12 T 29-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AL539_RS24410 dbcf9ac0fd9621b6f45d12a191cf7feb 301 SUPERFAMILY SSF103481 187 283 2.22E-10 T 29-03-2018 AL539_RS24410 dbcf9ac0fd9621b6f45d12a191cf7feb 301 Pfam PF00892 EamA-like transporter family 151 280 3.8E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS24410 dbcf9ac0fd9621b6f45d12a191cf7feb 301 Pfam PF00892 EamA-like transporter family 3 135 9.1E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS24410 dbcf9ac0fd9621b6f45d12a191cf7feb 301 SUPERFAMILY SSF103481 35 138 2.48E-11 T 29-03-2018 AL539_RS04720 475f51246c4c1ae2c46da62e9bf95111 208 PIRSF PIRSF006324 1 208 8.3E-56 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS04720 475f51246c4c1ae2c46da62e9bf95111 208 Pfam PF01810 LysE type translocator 15 205 2.8E-33 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS14365 c89cc9db5bc3b03597df0a2da209a409 203 Pfam PF08239 Bacterial SH3 domain 33 82 4.9E-10 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AL539_RS14365 c89cc9db5bc3b03597df0a2da209a409 203 Gene3D G3DSA:2.40.50.110 15 70 4.3E-9 T 29-03-2018 AL539_RS14365 c89cc9db5bc3b03597df0a2da209a409 203 PIRSF PIRSF006158 1 203 1.2E-69 T 29-03-2018 IPR016476 SH3 domain protein AL539_RS14365 c89cc9db5bc3b03597df0a2da209a409 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 9.9E-53 T 29-03-2018 IPR016476 SH3 domain protein AL539_RS14365 c89cc9db5bc3b03597df0a2da209a409 203 Gene3D G3DSA:1.10.287.620 71 166 3.3E-6 T 29-03-2018 AL539_RS14365 c89cc9db5bc3b03597df0a2da209a409 203 SMART SM00287 20 86 6.8E-9 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AL539_RS22155 0711ee1140c4dfb8bbb4f36b4b3762f6 222 Gene3D G3DSA:1.20.910.10 3 222 1.8E-59 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL539_RS22155 0711ee1140c4dfb8bbb4f36b4b3762f6 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 5.5E-41 T 29-03-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 AL539_RS22155 0711ee1140c4dfb8bbb4f36b4b3762f6 222 SUPERFAMILY SSF48613 3 216 2.04E-68 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL539_RS22155 0711ee1140c4dfb8bbb4f36b4b3762f6 222 Pfam PF03070 TENA/THI-4/PQQC family 9 217 2.6E-46 T 29-03-2018 IPR004305 Thiaminase-2/PQQC AL539_RS05215 18c4e61574d25e61b6e046fca02ca5e0 52 Pfam PF11665 Protein of unknown function (DUF3265) 21 48 8.8E-9 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AL539_RS07405 adee638c74562a69c197905530a8b62b 351 Pfam PF14842 FliG N-terminal domain 24 124 4.0E-28 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL539_RS07405 adee638c74562a69c197905530a8b62b 351 Gene3D G3DSA:1.10.220.30 23 88 6.2E-9 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS07405 adee638c74562a69c197905530a8b62b 351 SUPERFAMILY SSF48029 133 344 1.83E-66 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS07405 adee638c74562a69c197905530a8b62b 351 Gene3D G3DSA:1.10.220.30 89 212 7.3E-22 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS07405 adee638c74562a69c197905530a8b62b 351 Gene3D G3DSA:1.10.220.30 214 351 3.3E-32 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS07405 adee638c74562a69c197905530a8b62b 351 SUPERFAMILY SSF48029 25 135 3.92E-20 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_RS07405 adee638c74562a69c197905530a8b62b 351 Pfam PF01706 FliG C-terminal domain 236 343 2.8E-40 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AL539_RS07405 adee638c74562a69c197905530a8b62b 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 1.0E-97 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PIRSF PIRSF003161 18 351 2.1E-114 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 3.2E-59 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 3.2E-59 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 3.2E-59 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 3.2E-59 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 3.2E-59 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 3.2E-59 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS07405 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 3.2E-59 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 SMART SM00226 3 145 5.3E-47 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 Gene3D G3DSA:3.40.50.2300 3 146 2.4E-37 T 29-03-2018 AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 SUPERFAMILY SSF52788 1 146 2.88E-38 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 4.5E-34 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.4E-22 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 1.4E-22 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.4E-22 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 1.4E-22 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS23380 2e2ec9cba122156120ef150b1ce9212b 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.4E-22 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL539_RS04325 144e547f257c0bbc757c79c7e26d243a 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.0E-140 T 29-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL539_RS21845 924b482872f492ccf7dcf69a14257903 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 1.3E-207 T 29-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein AL539_RS21845 924b482872f492ccf7dcf69a14257903 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 615 3.7E-72 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_RS07185 018af16786a2e244fb2513165ca12c8b 438 SUPERFAMILY SSF56935 26 438 1.65E-103 T 29-03-2018 AL539_RS07185 018af16786a2e244fb2513165ca12c8b 438 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 438 3.4E-133 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL539_RS07185 018af16786a2e244fb2513165ca12c8b 438 Gene3D G3DSA:2.40.160.60 26 438 1.9E-84 T 29-03-2018 AL539_RS18380 f14d15b00092d06cb7f567814d951402 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 5.2E-53 T 29-03-2018 IPR021422 Protein of unknown function DUF3069 AL539_RS18380 f14d15b00092d06cb7f567814d951402 145 Gene3D G3DSA:1.10.3440.10 3 143 1.4E-60 T 29-03-2018 IPR023132 Sama2622-like domain AL539_RS18380 f14d15b00092d06cb7f567814d951402 145 SUPERFAMILY SSF158675 1 145 2.22E-52 T 29-03-2018 IPR023132 Sama2622-like domain AL539_RS17605 60364a8e375cfee196956a5e93a9975b 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 2.9E-34 T 29-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AL539_RS17605 60364a8e375cfee196956a5e93a9975b 106 Gene3D G3DSA:3.30.1390.10 13 105 1.7E-37 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL539_RS17605 60364a8e375cfee196956a5e93a9975b 106 SUPERFAMILY SSF54736 21 105 6.28E-33 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL539_RS17605 60364a8e375cfee196956a5e93a9975b 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.083 T 29-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AL539_RS18750 3fe010c975f1fc52f623cfa7bb87c3f0 156 PIRSF PIRSF003174 1 155 3.4E-48 T 29-03-2018 IPR010292 Uncharacterised protein family CreA AL539_RS18750 3fe010c975f1fc52f623cfa7bb87c3f0 156 Pfam PF05981 CreA protein 24 144 1.4E-42 T 29-03-2018 IPR010292 Uncharacterised protein family CreA AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.0E-89 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 PIRSF PIRSF016599 5 489 2.1E-216 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 Gene3D G3DSA:3.40.630.10 3 490 4.0E-51 T 29-03-2018 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 Pfam PF07687 Peptidase dimerisation domain 211 296 2.7E-8 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 Pfam PF01546 Peptidase family M20/M25/M40 77 477 2.2E-20 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 SUPERFAMILY SSF53187 401 486 1.23E-61 T 29-03-2018 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 SUPERFAMILY SSF53187 15 186 1.23E-61 T 29-03-2018 AL539_RS15845 ee9d30970360701bc7d61189555dd680 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 4.2E-183 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 Gene3D G3DSA:3.40.50.300 217 533 1.2E-17 T 29-03-2018 AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 5.0E-172 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 SUPERFAMILY SSF52540 1 199 6.19E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 SUPERFAMILY SSF52540 351 508 6.19E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 SUPERFAMILY SSF52540 287 322 6.19E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 Gene3D G3DSA:3.40.50.300 1 216 1.5E-23 T 29-03-2018 AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 508 2.5E-17 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AL539_RS15735 31fa9752678cb717b04e2ac196141090 554 PIRSF PIRSF003128 1 554 6.1E-163 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL539_RS11155 9f2be4326b3a602ba3dba6a31e8220d5 195 Gene3D G3DSA:1.20.1590.10 5 195 2.8E-74 T 29-03-2018 IPR023381 YP001051499.1-like domain AL539_RS11155 9f2be4326b3a602ba3dba6a31e8220d5 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.5E-78 T 29-03-2018 IPR007338 Protein of unknown function DUF416 AL539_RS25320 0d357bcdfd262f74f15e21d1ffc30af3 411 SUPERFAMILY SSF116734 202 404 1.5E-28 T 29-03-2018 AL539_RS25320 0d357bcdfd262f74f15e21d1ffc30af3 411 SUPERFAMILY SSF116734 4 180 6.54E-32 T 29-03-2018 AL539_RS25320 0d357bcdfd262f74f15e21d1ffc30af3 411 Gene3D G3DSA:3.90.220.20 2 159 3.2E-18 T 29-03-2018 AL539_RS25320 0d357bcdfd262f74f15e21d1ffc30af3 411 Gene3D G3DSA:3.90.220.20 160 382 6.0E-28 T 29-03-2018 AL539_RS25320 0d357bcdfd262f74f15e21d1ffc30af3 411 Pfam PF01420 Type I restriction modification DNA specificity domain 4 167 6.9E-20 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL539_RS18645 ab1740e96fb80bf8fe9a9930eeffe34a 69 Pfam PF06004 Bacterial protein of unknown function (DUF903) 20 68 4.6E-18 T 29-03-2018 IPR010305 Protein of unknown function DUF903 AL539_RS18645 ab1740e96fb80bf8fe9a9930eeffe34a 69 SUPERFAMILY SSF50182 18 68 3.11E-15 T 29-03-2018 IPR010920 LSM domain AL539_RS18645 ab1740e96fb80bf8fe9a9930eeffe34a 69 Gene3D G3DSA:2.30.30.100 18 68 2.1E-19 T 29-03-2018 AL539_RS00510 60a6fd3e07cef0610732f32344927992 291 Pfam PF13462 Thioredoxin 113 262 8.1E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS00510 60a6fd3e07cef0610732f32344927992 291 SUPERFAMILY SSF52833 110 282 3.53E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS00510 60a6fd3e07cef0610732f32344927992 291 Gene3D G3DSA:3.40.30.10 101 288 1.6E-31 T 29-03-2018 AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 Gene3D G3DSA:3.40.190.10 85 199 2.4E-4 T 29-03-2018 AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 SUPERFAMILY SSF46785 5 109 2.11E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 Gene3D G3DSA:1.10.10.10 3 84 2.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 Pfam PF03466 LysR substrate binding domain 89 292 8.5E-8 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20915 ba8d42b503c52550206cb983266a0518 303 SUPERFAMILY SSF53850 90 288 4.89E-18 T 29-03-2018 AL539_RS14405 af9ca81d5ebae1c524b485150bd3e38b 442 Gene3D G3DSA:1.20.1600.10 10 433 1.3E-75 T 29-03-2018 AL539_RS14405 af9ca81d5ebae1c524b485150bd3e38b 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 437 3.9E-107 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AL539_RS14405 af9ca81d5ebae1c524b485150bd3e38b 442 SUPERFAMILY SSF56954 1 430 1.83E-90 T 29-03-2018 AL539_RS14405 af9ca81d5ebae1c524b485150bd3e38b 442 Pfam PF02321 Outer membrane efflux protein 241 424 2.9E-32 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS14405 af9ca81d5ebae1c524b485150bd3e38b 442 Pfam PF02321 Outer membrane efflux protein 25 216 1.4E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AL539_RS21775 118fb6763c189ed8c2e651c2d3f100db 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 450 1.1E-46 T 29-03-2018 IPR000160 GGDEF domain AL539_RS21775 118fb6763c189ed8c2e651c2d3f100db 451 SUPERFAMILY SSF55073 299 451 1.1E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS21775 118fb6763c189ed8c2e651c2d3f100db 451 Pfam PF03924 CHASE domain 109 194 1.2E-14 T 29-03-2018 IPR006189 CHASE domain AL539_RS21775 118fb6763c189ed8c2e651c2d3f100db 451 Gene3D G3DSA:3.30.70.270 289 451 8.2E-50 T 29-03-2018 AL539_RS21775 118fb6763c189ed8c2e651c2d3f100db 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 4.9E-43 T 29-03-2018 IPR000160 GGDEF domain AL539_RS21775 118fb6763c189ed8c2e651c2d3f100db 451 SMART SM01079 47 223 4.4E-25 T 29-03-2018 IPR006189 CHASE domain AL539_RS21775 118fb6763c189ed8c2e651c2d3f100db 451 SMART SM00267 280 450 2.0E-47 T 29-03-2018 IPR000160 GGDEF domain AL539_RS09410 f67ff5f14dcf3efdd6686ef29ac6ee68 158 Pfam PF13673 Acetyltransferase (GNAT) domain 39 138 4.1E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS09410 f67ff5f14dcf3efdd6686ef29ac6ee68 158 Gene3D G3DSA:3.40.630.30 1 158 1.1E-19 T 29-03-2018 AL539_RS09410 f67ff5f14dcf3efdd6686ef29ac6ee68 158 SUPERFAMILY SSF55729 1 158 7.09E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS17565 ca4351c9f98fd2ff804c1d3b5f46264d 181 Pfam PF07445 Primosomal replication protein priC 4 178 2.3E-50 T 29-03-2018 IPR010890 Primosomal replication PriB/PriC AL539_RS10330 d2efdef6442c3a05a28838afab423ad7 93 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 1.6E-35 T 29-03-2018 IPR022072 Protein of unknown function DUF3624 AL539_RS21570 c377c2dfe524b8d214cc6bb8e46cee34 301 SUPERFAMILY SSF103481 200 298 6.93E-7 T 29-03-2018 AL539_RS21570 c377c2dfe524b8d214cc6bb8e46cee34 301 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 1.2E-103 T 29-03-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative AL539_RS21570 c377c2dfe524b8d214cc6bb8e46cee34 301 Pfam PF00892 EamA-like transporter family 5 136 1.2E-6 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS21570 c377c2dfe524b8d214cc6bb8e46cee34 301 Pfam PF00892 EamA-like transporter family 153 299 2.3E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS21570 c377c2dfe524b8d214cc6bb8e46cee34 301 SUPERFAMILY SSF103481 46 140 3.27E-9 T 29-03-2018 AL539_RS25500 4540d21e4a898c20f90bc9672fe04adb 279 SUPERFAMILY SSF52768 40 249 2.88E-19 T 29-03-2018 AL539_RS25500 4540d21e4a898c20f90bc9672fe04adb 279 Gene3D G3DSA:3.40.800.10 7 272 4.8E-14 T 29-03-2018 AL539_RS14095 a78418a1306f9746fd854bd5502eb07d 522 Pfam PF06527 TniQ 15 167 3.2E-10 T 29-03-2018 IPR009492 TniQ AL539_RS14095 a78418a1306f9746fd854bd5502eb07d 522 Pfam PF15978 Tn7-like transposition protein D 333 450 1.2E-17 T 29-03-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl AL539_RS14955 5dfa25f8c994f9a535db0c8036cae11d 143 SUPERFAMILY SSF54534 4 142 2.36E-36 T 29-03-2018 AL539_RS14955 5dfa25f8c994f9a535db0c8036cae11d 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 8.2E-13 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL539_RS14955 5dfa25f8c994f9a535db0c8036cae11d 143 Gene3D G3DSA:3.10.50.40 1 143 7.3E-19 T 29-03-2018 AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 Gene3D G3DSA:1.10.10.10 3 88 1.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 SUPERFAMILY SSF53850 92 296 1.57E-38 T 29-03-2018 AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 Pfam PF03466 LysR substrate binding domain 91 291 2.7E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 Gene3D G3DSA:3.40.190.10 177 260 1.7E-19 T 29-03-2018 AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15950 d6a068e67ddaa18857e19cd74f032c7a 306 Gene3D G3DSA:3.40.190.10 91 176 9.1E-18 T 29-03-2018 AL539_RS07880 506108e67351359f3215d14fe436e84d 222 Gene3D G3DSA:1.10.3680.10 88 222 8.9E-18 T 29-03-2018 IPR029024 TerB-like AL539_RS07880 506108e67351359f3215d14fe436e84d 222 SUPERFAMILY SSF158682 81 221 1.96E-28 T 29-03-2018 AL539_RS07880 506108e67351359f3215d14fe436e84d 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 1.8E-62 T 29-03-2018 IPR007486 Inner membrane protein YebE AL539_RS05555 0c9f7f9126861b727e1f13e0b3ec795a 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 5.4E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS05555 0c9f7f9126861b727e1f13e0b3ec795a 194 SUPERFAMILY SSF55729 12 185 3.09E-38 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS05555 0c9f7f9126861b727e1f13e0b3ec795a 194 Gene3D G3DSA:3.40.630.30 1 193 2.0E-23 T 29-03-2018 AL539_RS14965 a37e43b9d06d7a4c23216a03210016e6 156 Gene3D G3DSA:3.40.50.2300 1 138 2.7E-22 T 29-03-2018 AL539_RS14965 a37e43b9d06d7a4c23216a03210016e6 156 SMART SM00226 2 129 3.9E-7 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS14965 a37e43b9d06d7a4c23216a03210016e6 156 SUPERFAMILY SSF52788 1 137 1.1E-25 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS14965 a37e43b9d06d7a4c23216a03210016e6 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 94 1.7E-12 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_RS16810 d04c4f31908b1ddcea30c96b8cbdcc1d 261 Pfam PF00950 ABC 3 transport family 1 256 1.0E-73 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL539_RS16810 d04c4f31908b1ddcea30c96b8cbdcc1d 261 Gene3D G3DSA:1.10.3470.10 1 261 5.6E-25 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS16810 d04c4f31908b1ddcea30c96b8cbdcc1d 261 SUPERFAMILY SSF81345 2 253 1.44E-38 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS00650 f8a5142617e7e802b2ff0ab16dfabe99 360 Pfam PF13878 zinc-finger of acetyl-transferase ESCO 214 239 1.1E-5 T 29-03-2018 IPR028005 N-acetyltransferase ESCO, zinc-finger Reactome: R-HSA-2468052 AL539_RS20610 f0ae7af9bf827c415a87276eda62f487 407 SUPERFAMILY SSF111369 56 157 7.72E-8 T 29-03-2018 AL539_RS20610 f0ae7af9bf827c415a87276eda62f487 407 Gene3D G3DSA:1.20.1600.10 49 350 8.3E-22 T 29-03-2018 AL539_RS20610 f0ae7af9bf827c415a87276eda62f487 407 SUPERFAMILY SSF111369 199 295 1.57E-7 T 29-03-2018 AL539_RS20610 f0ae7af9bf827c415a87276eda62f487 407 Pfam PF13533 Biotin-lipoyl like 72 110 9.5E-12 T 29-03-2018 AL539_RS15925 d6621b9daa50248c66bb4db9993cea6d 294 Pfam PF00348 Polyprenyl synthetase 29 270 3.7E-57 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL539_RS15925 d6621b9daa50248c66bb4db9993cea6d 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL539_RS15925 d6621b9daa50248c66bb4db9993cea6d 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AL539_RS15925 d6621b9daa50248c66bb4db9993cea6d 294 Gene3D G3DSA:1.10.600.10 1 294 1.4E-85 T 29-03-2018 IPR008949 Isoprenoid synthase domain AL539_RS15925 d6621b9daa50248c66bb4db9993cea6d 294 SUPERFAMILY SSF48576 3 285 3.52E-86 T 29-03-2018 IPR008949 Isoprenoid synthase domain AL539_RS12755 c3431df7b777583200f189d57241ba20 142 SUPERFAMILY SSF55729 1 128 4.29E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS12755 c3431df7b777583200f189d57241ba20 142 Gene3D G3DSA:3.40.630.30 2 142 1.9E-16 T 29-03-2018 AL539_RS12755 c3431df7b777583200f189d57241ba20 142 Pfam PF00583 Acetyltransferase (GNAT) family 30 115 2.7E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS21960 378fcba8c783da907b353b52dccacb7e 289 SUPERFAMILY SSF53807 26 260 6.28E-19 T 29-03-2018 AL539_RS21960 378fcba8c783da907b353b52dccacb7e 289 Gene3D G3DSA:3.40.50.1980 24 189 1.6E-12 T 29-03-2018 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 SUPERFAMILY SSF55174 1 81 2.5E-12 T 29-03-2018 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 Gene3D G3DSA:3.30.2350.10 57 233 1.1E-33 T 29-03-2018 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 SMART SM00363 1 59 3.7E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 Gene3D G3DSA:3.10.290.10 1 55 1.1E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 SUPERFAMILY SSF55120 60 228 2.08E-43 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 6.9E-18 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 Pfam PF01479 S4 domain 1 47 2.0E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS01965 d6f999017443f34c8b5a0f510a08d2a7 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 9.6E-48 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL539_RS18960 a32b0738b3fcef0eb36d212879919bcd 175 Gene3D G3DSA:2.60.40.1120 41 127 7.1E-6 T 29-03-2018 AL539_RS18960 a32b0738b3fcef0eb36d212879919bcd 175 SUPERFAMILY SSF49464 41 115 5.49E-5 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 SUPERFAMILY SSF52821 154 275 6.16E-35 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 SUPERFAMILY SSF52821 3 137 3.01E-31 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 Gene3D G3DSA:3.40.250.10 1 151 1.3E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 Pfam PF00581 Rhodanese-like domain 154 268 7.1E-12 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 Pfam PF00581 Rhodanese-like domain 7 124 7.4E-11 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 SMART SM00450 5 128 4.1E-14 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 SMART SM00450 152 272 3.6E-17 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS20245 592eddd84337a84def4c2e48a677c487 276 Gene3D G3DSA:3.40.250.10 153 276 2.6E-27 T 29-03-2018 IPR001763 Rhodanese-like domain AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 Gene3D G3DSA:2.30.330.10 41 136 2.2E-30 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS07365 4ca3547173c506447e122809e03eaf13 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AL539_RS18810 cd4ce465d8079760dcf78df9c30a3e6f 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 1.8E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS18810 cd4ce465d8079760dcf78df9c30a3e6f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 5.4E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS18810 cd4ce465d8079760dcf78df9c30a3e6f 306 SUPERFAMILY SSF161098 72 141 6.54E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS18810 cd4ce465d8079760dcf78df9c30a3e6f 306 SUPERFAMILY SSF161098 170 290 6.54E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS18810 cd4ce465d8079760dcf78df9c30a3e6f 306 Gene3D G3DSA:1.10.3720.10 16 305 1.1E-44 T 29-03-2018 AL539_RS23605 8efdaad41295e698583e10bbc050319e 125 SUPERFAMILY SSF50729 10 124 1.48E-39 T 29-03-2018 IPR011993 PH domain-like AL539_RS23605 8efdaad41295e698583e10bbc050319e 125 Gene3D G3DSA:2.30.29.50 14 106 3.9E-34 T 29-03-2018 IPR012544 Bacterial Pleckstrin homology domain AL539_RS23605 8efdaad41295e698583e10bbc050319e 125 Pfam PF08000 Bacterial PH domain 5 123 5.3E-39 T 29-03-2018 IPR012544 Bacterial Pleckstrin homology domain AL539_RS17085 7571cf63d9edb74dc587d73cfbe6ffc7 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 456 2.0E-155 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 AL539_RS17085 7571cf63d9edb74dc587d73cfbe6ffc7 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.238 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 AL539_RS21080 38a78d1992f144be94475c60b065db60 296 Gene3D G3DSA:1.10.3720.10 27 293 4.3E-29 T 29-03-2018 AL539_RS21080 38a78d1992f144be94475c60b065db60 296 SUPERFAMILY SSF161098 24 291 5.51E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS21080 38a78d1992f144be94475c60b065db60 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 286 8.2E-10 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS24010 6b54f4233e68a3815d683317df1a6a37 494 SUPERFAMILY SSF48452 65 315 2.6E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS24010 6b54f4233e68a3815d683317df1a6a37 494 SMART SM00028 127 160 49.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS24010 6b54f4233e68a3815d683317df1a6a37 494 SMART SM00028 207 240 3.7 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS24010 6b54f4233e68a3815d683317df1a6a37 494 SMART SM00028 87 120 360.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL539_RS24010 6b54f4233e68a3815d683317df1a6a37 494 Gene3D G3DSA:1.25.40.10 111 391 2.3E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS24010 6b54f4233e68a3815d683317df1a6a37 494 Gene3D G3DSA:1.25.40.10 19 110 0.028 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS02380 83924769208287a7b86440241bacb224 229 SUPERFAMILY SSF51735 3 210 1.93E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS02380 83924769208287a7b86440241bacb224 229 Gene3D G3DSA:3.40.50.720 3 228 2.3E-18 T 29-03-2018 AL539_RS02380 83924769208287a7b86440241bacb224 229 Pfam PF08732 HIM1 78 170 4.1E-9 T 29-03-2018 IPR014843 Protein Him1/Fmp52 AL539_RS08230 f4320ac66e58c08277a0523ca9336314 225 Pfam PF03412 Peptidase C39 family 46 181 5.7E-21 T 29-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AL539_RS08230 f4320ac66e58c08277a0523ca9336314 225 Gene3D G3DSA:3.90.70.10 44 191 1.0E-28 T 29-03-2018 AL539_RS10810 469db4548c8386631932e2f241d3fb7f 124 Pfam PF04892 VanZ like family 36 109 4.1E-9 T 29-03-2018 IPR006976 VanZ-like AL539_RS22665 bfc5dfccac945ed10b45ee8947b1b762 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 1.1E-141 T 29-03-2018 IPR021781 Protein of unknown function DUF3346 AL539_RS06330 2ac6c2533e96bc2df4e93acc22d6f1af 467 Gene3D G3DSA:1.10.150.20 157 225 2.1E-5 T 29-03-2018 AL539_RS06330 2ac6c2533e96bc2df4e93acc22d6f1af 467 Pfam PF00817 impB/mucB/samB family 23 146 3.3E-8 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL539_RS06330 2ac6c2533e96bc2df4e93acc22d6f1af 467 SUPERFAMILY SSF56672 5 225 1.51E-34 T 29-03-2018 AL539_RS00375 182f844616dc42ea59359fc39765595f 317 Gene3D G3DSA:3.40.50.300 1 158 9.5E-5 T 29-03-2018 AL539_RS00375 182f844616dc42ea59359fc39765595f 317 SUPERFAMILY SSF52540 2 167 7.64E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS01225 492b11c61494e52e2572ebeda8ff5323 362 Gene3D G3DSA:3.30.450.20 185 327 1.0E-8 T 29-03-2018 AL539_RS01225 492b11c61494e52e2572ebeda8ff5323 362 Gene3D G3DSA:3.30.450.20 34 184 7.7E-17 T 29-03-2018 AL539_RS01225 492b11c61494e52e2572ebeda8ff5323 362 SUPERFAMILY SSF103190 148 207 8.89E-5 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AL539_RS05365 795f713a4906b9cef94c400236f478aa 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.6E-15 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS13420 20bbd6651651eda72f084a26767030e5 116 Pfam PF11333 Protein of unknown function (DUF3135) 12 91 2.2E-33 T 29-03-2018 IPR021482 Protein of unknown function DUF3135 AL539_RS13420 20bbd6651651eda72f084a26767030e5 116 Gene3D G3DSA:3.40.50.720 10 110 7.5E-4 T 29-03-2018 AL539_RS13365 2030b2733579af484abc8f8192bf5701 378 Pfam PF00534 Glycosyl transferases group 1 194 341 7.1E-7 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS13365 2030b2733579af484abc8f8192bf5701 378 Gene3D G3DSA:3.40.50.2000 153 347 5.2E-13 T 29-03-2018 AL539_RS13365 2030b2733579af484abc8f8192bf5701 378 SUPERFAMILY SSF53756 68 374 3.53E-18 T 29-03-2018 AL539_RS18975 733b3fbd2b4679e54d158ef6e5f53ccd 334 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 1.3E-30 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AL539_RS21075 9cee41928c314194a5753c8bb122ba67 274 SUPERFAMILY SSF53649 2 259 3.93E-49 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AL539_RS21075 9cee41928c314194a5753c8bb122ba67 274 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 215 1.2E-13 T 29-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AL539_RS21075 9cee41928c314194a5753c8bb122ba67 274 Gene3D G3DSA:3.40.720.10 2 266 1.3E-33 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AL539_RS11815 022889ddba76c5235775d481ee6f5055 646 Pfam PF13667 ThiC-associated domain 22 104 3.8E-34 T 29-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL539_RS11815 022889ddba76c5235775d481ee6f5055 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 56.275 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL539_RS11815 022889ddba76c5235775d481ee6f5055 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 1.8E-218 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL539_RS11815 022889ddba76c5235775d481ee6f5055 646 Pfam PF01964 Radical SAM ThiC family 144 592 8.4E-199 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL539_RS02205 81e7751d581737dc6b042cb44408c35d 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 29-03-2018 IPR024498 Domain of unknown function DUF2786 AL539_RS02205 81e7751d581737dc6b042cb44408c35d 231 PIRSF PIRSF028111 1 230 2.2E-84 T 29-03-2018 IPR016868 Bacteriophage B3, Orf5 AL539_RS04365 eeb3513f8c494244c1766f09601b1951 607 Pfam PF04792 V antigen (LcrV) protein 408 607 5.2E-29 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL539_RS04365 eeb3513f8c494244c1766f09601b1951 607 SUPERFAMILY SSF103388 351 606 6.8E-84 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL539_RS04365 eeb3513f8c494244c1766f09601b1951 607 PRINTS PR01592 Low calcium response V antigen signature 454 476 9.4E-12 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL539_RS04365 eeb3513f8c494244c1766f09601b1951 607 PRINTS PR01592 Low calcium response V antigen signature 582 604 9.4E-12 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 20 56 1.3E-14 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 2.8E-17 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 151 3.2E-16 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 186 1.0 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Gene3D G3DSA:3.30.65.10 63 105 2.9E-17 T 29-03-2018 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Gene3D G3DSA:3.30.65.10 10 62 8.6E-17 T 29-03-2018 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Gene3D G3DSA:3.30.65.10 106 152 2.0E-15 T 29-03-2018 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 Gene3D G3DSA:3.30.65.10 153 188 0.0086 T 29-03-2018 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 SUPERFAMILY SSF57783 66 110 6.8E-15 T 29-03-2018 AL539_RS11990 2d76c18dcf07c7366ee13aea6eaee28a 189 SUPERFAMILY SSF57783 17 64 6.04E-14 T 29-03-2018 AL539_RS04375 9f04bbe9495bdfe42bf97dd65e424f80 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 1 137 1.8E-58 T 29-03-2018 IPR013405 Type III secretion system regulator, LcrR AL539_RS04375 9f04bbe9495bdfe42bf97dd65e424f80 137 Pfam PF09621 Type III secretion system regulator (LcrR) 4 136 8.2E-56 T 29-03-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 AL539_RS08690 200e4e35c158edbc719ea3d27ee43b33 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL539_RS08690 200e4e35c158edbc719ea3d27ee43b33 222 Gene3D G3DSA:3.40.1050.10 1 219 4.2E-75 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL539_RS08690 200e4e35c158edbc719ea3d27ee43b33 222 SMART SM00947 30 192 1.5E-67 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL539_RS08690 200e4e35c158edbc719ea3d27ee43b33 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL539_RS08690 200e4e35c158edbc719ea3d27ee43b33 222 Pfam PF00484 Carbonic anhydrase 38 188 3.1E-50 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL539_RS08690 200e4e35c158edbc719ea3d27ee43b33 222 SUPERFAMILY SSF53056 2 212 2.22E-74 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL539_RS18950 6e9d23fb13aa2655e4e5471a0001b131 286 Pfam PF15575 Immunity protein 49 97 276 2.3E-24 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS19290 0c73c8fb352ea437d3d196bc5a363fd2 192 Pfam PF14316 Domain of unknown function (DUF4381) 15 164 1.1E-25 T 29-03-2018 IPR025489 Protein of unknown function (DUF4381 AL539_RS11795 f9c7e7152dc67c6dcfac75a743d4276a 255 SUPERFAMILY SSF110399 1 236 1.23E-85 T 29-03-2018 AL539_RS11795 f9c7e7152dc67c6dcfac75a743d4276a 255 Gene3D G3DSA:3.20.20.70 1 255 7.0E-56 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS11795 f9c7e7152dc67c6dcfac75a743d4276a 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 2.6E-110 T 29-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL539_RS11795 f9c7e7152dc67c6dcfac75a743d4276a 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.129 T 29-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL539_RS22275 a9e08edcdd9ea770636a6298d75734bb 141 SUPERFAMILY SSF54593 9 134 4.81E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS22275 a9e08edcdd9ea770636a6298d75734bb 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 3.5E-9 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS22275 a9e08edcdd9ea770636a6298d75734bb 141 Gene3D G3DSA:3.10.180.10 1 135 2.0E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS06150 eb96b8d9daeb19e121358d1304bad6b2 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.1E-184 T 29-03-2018 IPR015004 Protein of unknown function DUF1852 AL539_RS06150 eb96b8d9daeb19e121358d1304bad6b2 324 PIRSF PIRSF034367 1 324 6.7E-197 T 29-03-2018 IPR015004 Protein of unknown function DUF1852 AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 3.5E-155 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 8.1E-37 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 8.1E-37 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 8.1E-37 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 8.1E-37 T 29-03-2018 IPR003004 GspF/PilC family AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 Gene3D G3DSA:3.30.70.1120 108 170 0.0054 T 29-03-2018 AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.7E-35 T 29-03-2018 IPR018076 Type II secretion system F domain AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.1E-24 T 29-03-2018 IPR018076 Type II secretion system F domain AL539_RS12900 7a2dac20725c9a4b64296e752984ddf1 405 Gene3D G3DSA:1.20.1180.10 59 107 0.0021 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AL539_RS10500 7d7368ae71aced6c3a2fdf7186335e88 335 SUPERFAMILY SSF53474 32 299 5.36E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS10500 7d7368ae71aced6c3a2fdf7186335e88 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 2.5E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AL539_RS10500 7d7368ae71aced6c3a2fdf7186335e88 335 PIRSF PIRSF005211 1 335 2.1E-104 T 29-03-2018 IPR012020 AB hydrolase 4 family AL539_RS10500 7d7368ae71aced6c3a2fdf7186335e88 335 Gene3D G3DSA:3.40.50.1820 21 328 1.2E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS10500 7d7368ae71aced6c3a2fdf7186335e88 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 29-03-2018 IPR000952 AB hydrolase 4, conserved site AL539_RS11420 b1de87bc7bdf1e1dbd72a72d7717ec0d 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 4.7E-19 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL539_RS18075 06cc2400eecbb620369fa4acd021b3e4 262 SUPERFAMILY SSF53474 9 247 5.55E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS18075 06cc2400eecbb620369fa4acd021b3e4 262 Pfam PF01764 Lipase (class 3) 60 204 8.5E-27 T 29-03-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AL539_RS18075 06cc2400eecbb620369fa4acd021b3e4 262 Gene3D G3DSA:3.40.50.1820 3 227 1.3E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS24230 b0b139ee492bb28b048451b7d17ff7b8 578 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 523 7.7E-180 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS24230 b0b139ee492bb28b048451b7d17ff7b8 578 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 391 2.8E-124 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AL539_RS20600 71655e74bbddf897230c507726430ea5 333 Pfam PF12833 Helix-turn-helix domain 256 328 8.0E-12 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS20600 71655e74bbddf897230c507726430ea5 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 6.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20600 71655e74bbddf897230c507726430ea5 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 6.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL539_RS20600 71655e74bbddf897230c507726430ea5 333 SUPERFAMILY SSF46689 290 329 4.08E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS20600 71655e74bbddf897230c507726430ea5 333 Gene3D G3DSA:1.10.10.60 283 332 5.6E-11 T 29-03-2018 AL539_RS20600 71655e74bbddf897230c507726430ea5 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 195 5.0E-17 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AL539_RS20600 71655e74bbddf897230c507726430ea5 333 SMART SM00342 247 328 9.9E-11 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL539_RS23620 fae1d71827503c618251e81c06fd1352 331 Pfam PF00691 OmpA family 171 267 9.5E-12 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS23620 fae1d71827503c618251e81c06fd1352 331 SUPERFAMILY SSF103088 155 275 2.49E-19 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS23620 fae1d71827503c618251e81c06fd1352 331 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 63 3.8E-16 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain AL539_RS23620 fae1d71827503c618251e81c06fd1352 331 Gene3D G3DSA:3.30.1330.60 123 307 8.5E-28 T 29-03-2018 IPR006665 OmpA-like domain AL539_RS02770 354226046d73b07ba77a2d775109e9d4 248 SUPERFAMILY SSF52317 5 245 2.06E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS02770 354226046d73b07ba77a2d775109e9d4 248 Pfam PF07722 Peptidase C26 7 226 2.0E-68 T 29-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AL539_RS02770 354226046d73b07ba77a2d775109e9d4 248 Gene3D G3DSA:3.40.50.880 4 248 2.2E-36 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AL539_RS20990 42f2e3b2b158f2ee7cbc9e9cabf584a7 204 Pfam PF01810 LysE type translocator 15 202 9.8E-25 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS20990 42f2e3b2b158f2ee7cbc9e9cabf584a7 204 PIRSF PIRSF006324 1 204 9.9E-50 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS15470 6856009bbeb69c4549fb94f9b623f815 187 Pfam PF13505 Outer membrane protein beta-barrel domain 10 187 6.5E-26 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS15470 6856009bbeb69c4549fb94f9b623f815 187 SUPERFAMILY SSF56925 27 187 4.45E-32 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS15470 6856009bbeb69c4549fb94f9b623f815 187 Gene3D G3DSA:2.40.160.20 12 187 4.3E-24 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS21750 b515b555920ccd1a6ad5172430c4ca82 514 SUPERFAMILY SSF48173 229 500 6.02E-63 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AL539_RS21750 b515b555920ccd1a6ad5172430c4ca82 514 Gene3D G3DSA:1.25.40.80 132 322 1.3E-41 T 29-03-2018 AL539_RS21750 b515b555920ccd1a6ad5172430c4ca82 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 7.8E-69 T 29-03-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AL539_RS21750 b515b555920ccd1a6ad5172430c4ca82 514 Gene3D G3DSA:1.10.579.10 323 512 6.7E-29 T 29-03-2018 AL539_RS22240 a39fce2725eda4e4021ec8ca25187e58 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 375 6.4E-21 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AL539_RS22240 a39fce2725eda4e4021ec8ca25187e58 380 Pfam PF05651 Putative sugar diacid recognition 4 137 3.0E-51 T 29-03-2018 IPR008599 Putative sugar diacid recognition AL539_RS22240 a39fce2725eda4e4021ec8ca25187e58 380 Gene3D G3DSA:1.10.10.60 305 354 5.9E-12 T 29-03-2018 AL539_RS22240 a39fce2725eda4e4021ec8ca25187e58 380 SUPERFAMILY SSF46689 323 352 4.44E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AL539_RS01750 005658ba531fa597d2c29de1bcd10752 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 402 3.6E-165 T 29-03-2018 IPR021552 Putative, 10TM heavy-metal exporter AL539_RS21995 519d3db9a27f34de907354f1f3e12d1b 179 PIRSF PIRSF014995 8 179 2.1E-65 T 29-03-2018 IPR014469 Protein of unknown function DUF2271 AL539_RS21995 519d3db9a27f34de907354f1f3e12d1b 179 Pfam PF10029 Predicted periplasmic protein (DUF2271) 38 169 3.0E-45 T 29-03-2018 IPR014469 Protein of unknown function DUF2271 AL539_RS16070 11472fbb857a546d6605b1290d35c13f 92 SUPERFAMILY SSF117991 7 92 2.62E-31 T 29-03-2018 IPR027471 YbeD-like domain AL539_RS16070 11472fbb857a546d6605b1290d35c13f 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.3E-29 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 AL539_RS16070 11472fbb857a546d6605b1290d35c13f 92 Gene3D G3DSA:3.30.70.260 10 92 3.4E-30 T 29-03-2018 AL539_RS16070 11472fbb857a546d6605b1290d35c13f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.481 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 AL539_RS11500 e9c3204fd1dd3a8ac50d503df3e9dae1 337 Pfam PF01757 Acyltransferase family 7 327 2.3E-28 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AL539_RS20680 daf095d0af750a396af90336823e43ee 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL539_RS20680 daf095d0af750a396af90336823e43ee 199 PIRSF PIRSF001488 1 199 2.5E-61 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL539_RS20680 daf095d0af750a396af90336823e43ee 199 SUPERFAMILY SSF52833 20 197 1.43E-44 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS20680 daf095d0af750a396af90336823e43ee 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 2.0E-18 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AL539_RS20680 daf095d0af750a396af90336823e43ee 199 Gene3D G3DSA:3.40.30.10 17 199 2.7E-38 T 29-03-2018 AL539_RS07575 a06aa29f99ccf5acd0b03f03bc02475b 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 2.1E-111 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL539_RS07575 a06aa29f99ccf5acd0b03f03bc02475b 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL539_RS07575 a06aa29f99ccf5acd0b03f03bc02475b 417 Pfam PF00860 Permease family 3 371 6.1E-91 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AL539_RS08210 d06a8e5e601207117604f2b490c6bf1c 379 Pfam PF02417 Chromate transporter 212 373 3.7E-34 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL539_RS08210 d06a8e5e601207117604f2b490c6bf1c 379 Pfam PF02417 Chromate transporter 3 168 1.2E-33 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL539_RS08210 d06a8e5e601207117604f2b490c6bf1c 379 PIRSF PIRSF004810 1 379 2.8E-115 T 29-03-2018 IPR014047 Chromate transporter, long chain AL539_RS08210 d06a8e5e601207117604f2b490c6bf1c 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 1.3E-91 T 29-03-2018 IPR014047 Chromate transporter, long chain AL539_RS11470 455652e9ac04fb155266c97636868cce 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 2.8E-29 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS11470 455652e9ac04fb155266c97636868cce 194 Pfam PF01914 MarC family integral membrane protein 3 192 3.0E-54 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS24440 27ce2ff6e519d4e89356de8324b6e611 317 Pfam PF01032 FecCD transport family 27 312 1.7E-36 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS24440 27ce2ff6e519d4e89356de8324b6e611 317 SUPERFAMILY SSF81345 12 312 8.37E-40 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS24440 27ce2ff6e519d4e89356de8324b6e611 317 Gene3D G3DSA:1.10.3470.10 4 317 3.8E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS16985 303d8337d76e3ba9b6332b0222d85255 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 192 9.7E-12 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL539_RS16985 303d8337d76e3ba9b6332b0222d85255 206 SUPERFAMILY SSF89392 27 192 6.28E-20 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_RS16985 303d8337d76e3ba9b6332b0222d85255 206 Gene3D G3DSA:2.50.20.10 24 204 2.8E-19 T 29-03-2018 AL539_RS13085 17a89403c417243006e8ac9adb22463b 347 SUPERFAMILY SSF161098 139 325 3.14E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS13085 17a89403c417243006e8ac9adb22463b 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 1.5E-27 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS13085 17a89403c417243006e8ac9adb22463b 347 Gene3D G3DSA:1.10.3720.10 10 331 1.8E-40 T 29-03-2018 AL539_RS19800 0851f45d988995581e6f884d7c27c38f 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 5.5E-32 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL539_RS19800 0851f45d988995581e6f884d7c27c38f 297 Gene3D G3DSA:1.10.3470.10 1 284 2.4E-45 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS25660 f4d007596309fef88b50ec3e8dc8c340 141 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 99 126 5.0E-7 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL539_RS25660 f4d007596309fef88b50ec3e8dc8c340 141 SUPERFAMILY SSF109635 7 100 3.14E-23 T 29-03-2018 AL539_RS25660 f4d007596309fef88b50ec3e8dc8c340 141 SUPERFAMILY SSF57716 101 139 5.99E-6 T 29-03-2018 AL539_RS06960 bf572f583d1df1f48159ce12a1cc5338 94 SUPERFAMILY SSF54909 1 93 1.94E-26 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS06960 bf572f583d1df1f48159ce12a1cc5338 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 71 5.1E-18 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL539_RS06960 bf572f583d1df1f48159ce12a1cc5338 94 Gene3D G3DSA:3.30.70.100 1 93 1.2E-21 T 29-03-2018 AL539_RS25815 bd8b42cb8d5b90e5d3940df4dbf633f1 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 78 7.9E-26 T 29-03-2018 IPR022201 Protein of unknown function DUF3726 AL539_RS03735 45255bcc83c401f0b40272cdf69a7de0 286 SUPERFAMILY SSF161098 10 275 4.19E-54 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS03735 45255bcc83c401f0b40272cdf69a7de0 286 Gene3D G3DSA:1.10.3720.10 10 285 8.1E-45 T 29-03-2018 AL539_RS03735 45255bcc83c401f0b40272cdf69a7de0 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 1.1E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS02490 e8e4e2171e0ddff3cf2a065d0a27e82d 418 SUPERFAMILY SSF54373 273 360 2.22E-9 T 29-03-2018 AL539_RS02490 e8e4e2171e0ddff3cf2a065d0a27e82d 418 Gene3D G3DSA:3.50.50.60 4 418 2.1E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02490 e8e4e2171e0ddff3cf2a065d0a27e82d 418 Pfam PF01266 FAD dependent oxidoreductase 12 398 9.5E-53 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS02490 e8e4e2171e0ddff3cf2a065d0a27e82d 418 SUPERFAMILY SSF51905 123 272 1.55E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02490 e8e4e2171e0ddff3cf2a065d0a27e82d 418 SUPERFAMILY SSF51905 11 66 1.55E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02490 e8e4e2171e0ddff3cf2a065d0a27e82d 418 SUPERFAMILY SSF51905 361 417 1.55E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS25020 482a99bcd0e434b10b29bbd1ce8364f7 236 Pfam PF03591 AzlC protein 25 163 6.0E-35 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease AL539_RS13780 9afbf91fb52e8fb95edd700e619f7adb 120 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 8.4E-19 T 29-03-2018 IPR021242 Protein of unknown function DUF2799 AL539_RS24330 ca784c8174ea63e4d32b3eb50caf1614 435 Pfam PF01943 Polysaccharide biosynthesis protein 19 296 1.4E-11 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL539_RS24330 ca784c8174ea63e4d32b3eb50caf1614 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 349 432 2.0E-7 T 29-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AL539_RS11770 41f32bc5035edbf973b642e4cae5954b 93 Gene3D G3DSA:1.10.287.1050 25 81 3.5E-4 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AL539_RS17625 06196a9041310de7aa5a071a3efd9f2c 235 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 224 8.6E-75 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL539_RS17625 06196a9041310de7aa5a071a3efd9f2c 235 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 235 88.579 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL539_RS17625 06196a9041310de7aa5a071a3efd9f2c 235 SUPERFAMILY SSF55729 5 230 3.18E-86 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS17625 06196a9041310de7aa5a071a3efd9f2c 235 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 204 2.4E-67 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.8E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 5.7E-21 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 5.7E-21 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 5.7E-21 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 Pfam PF12019 Type II transport protein GspH 42 180 1.0E-8 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.5E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 167 1.1E-12 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 Gene3D G3DSA:3.55.40.10 33 199 3.2E-39 T 29-03-2018 AL539_RS12910 868fd141fc4a3c4deacdf330a3906bec 199 SUPERFAMILY SSF54523 7 91 4.55E-10 T 29-03-2018 AL539_RS20335 e2b199a02b6d9cf68eabdef0def1e141 287 PIRSF PIRSF028200 12 287 7.0E-90 T 29-03-2018 IPR016875 Uncharacterised conserved protein UCP028200 AL539_RS00700 72029f62d7c65b284b2702b6d84d8ddd 581 Gene3D G3DSA:1.10.150.130 54 388 0.0017 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS07195 72029f62d7c65b284b2702b6d84d8ddd 581 Gene3D G3DSA:1.10.150.130 54 388 0.0017 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AL539_RS04735 ad67f8155e4beff9381c41827adcdb97 201 SUPERFAMILY SSF51735 1 156 1.46E-10 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS04735 ad67f8155e4beff9381c41827adcdb97 201 Gene3D G3DSA:3.40.50.720 2 172 5.0E-10 T 29-03-2018 AL539_RS19465 e4c60e0bfc6499936d1f18750f5bf937 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 2.7E-54 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AL539_RS19465 e4c60e0bfc6499936d1f18750f5bf937 327 Gene3D G3DSA:1.10.3470.10 36 326 1.1E-39 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS17560 134b24bb1213426c9f8ad5b4d9da916f 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 3.7E-24 T 29-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related AL539_RS19055 392f59ab91c1d2ee38b1c30c739a0ca1 142 SUPERFAMILY SSF54637 13 137 5.32E-24 T 29-03-2018 IPR029069 HotDog domain AL539_RS19055 392f59ab91c1d2ee38b1c30c739a0ca1 142 Gene3D G3DSA:3.10.129.10 3 142 1.9E-21 T 29-03-2018 AL539_RS19055 392f59ab91c1d2ee38b1c30c739a0ca1 142 Pfam PF03061 Thioesterase superfamily 59 109 7.7E-8 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL539_RS02385 c0b9de08c2656f0779a036a8f94a713a 347 Pfam PF02277 Phosphoribosyltransferase 2 345 5.3E-128 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02385 c0b9de08c2656f0779a036a8f94a713a 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.651 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02385 c0b9de08c2656f0779a036a8f94a713a 347 Gene3D G3DSA:3.40.50.10210 65 328 1.6E-99 T 29-03-2018 AL539_RS02385 c0b9de08c2656f0779a036a8f94a713a 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2 345 1.9E-130 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02385 c0b9de08c2656f0779a036a8f94a713a 347 Gene3D G3DSA:1.10.1610.10 1 64 2.5E-29 T 29-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS02385 c0b9de08c2656f0779a036a8f94a713a 347 SUPERFAMILY SSF52733 2 346 4.71E-112 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AL539_RS06260 a770fdd757129988f9098e21fed90260 548 Pfam PF02470 MlaD protein 287 391 7.3E-13 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS06260 a770fdd757129988f9098e21fed90260 548 Pfam PF02470 MlaD protein 43 134 1.4E-9 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS06260 a770fdd757129988f9098e21fed90260 548 Pfam PF02470 MlaD protein 160 219 3.1E-7 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS06260 a770fdd757129988f9098e21fed90260 548 Gene3D G3DSA:1.20.120.330 409 531 8.3E-6 T 29-03-2018 AL539_RS05925 03cdbf512a8e0008543504b7be9cea9b 255 Gene3D G3DSA:3.30.460.10 6 134 2.8E-10 T 29-03-2018 AL539_RS05925 03cdbf512a8e0008543504b7be9cea9b 255 SUPERFAMILY SSF81301 6 72 7.27E-8 T 29-03-2018 AL539_RS04520 264fde119c1f00fa55b2230416c69848 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 1.2E-20 T 29-03-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 AL539_RS04520 264fde119c1f00fa55b2230416c69848 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 4.5E-25 T 29-03-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 AL539_RS04520 264fde119c1f00fa55b2230416c69848 82 SUPERFAMILY SSF140129 2 78 5.89E-24 T 29-03-2018 AL539_RS18920 7c9fc60cbb45f5e9d7d6338ec8729102 303 SUPERFAMILY SSF103481 41 145 2.35E-12 T 29-03-2018 AL539_RS18920 7c9fc60cbb45f5e9d7d6338ec8729102 303 SUPERFAMILY SSF103481 192 291 1.57E-7 T 29-03-2018 AL539_RS18920 7c9fc60cbb45f5e9d7d6338ec8729102 303 Pfam PF00892 EamA-like transporter family 155 289 6.2E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS18920 7c9fc60cbb45f5e9d7d6338ec8729102 303 Pfam PF00892 EamA-like transporter family 7 142 2.1E-22 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS22130 afadf07b8b53a362860fc5d0f889bb53 461 SUPERFAMILY SSF111283 7 459 1.14E-112 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS22130 afadf07b8b53a362860fc5d0f889bb53 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 2.7E-61 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS22130 afadf07b8b53a362860fc5d0f889bb53 461 Gene3D G3DSA:3.30.2290.10 5 222 5.9E-39 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL539_RS22130 afadf07b8b53a362860fc5d0f889bb53 461 PIRSF PIRSF004919 1 461 1.2E-114 T 29-03-2018 IPR025502 TldD AL539_RS03355 f66a3eaf3b11d1d736a8b6e6fa53db70 390 Gene3D G3DSA:3.40.50.2000 137 349 9.3E-18 T 29-03-2018 AL539_RS03355 f66a3eaf3b11d1d736a8b6e6fa53db70 390 SUPERFAMILY SSF53756 10 359 7.33E-28 T 29-03-2018 AL539_RS03355 f66a3eaf3b11d1d736a8b6e6fa53db70 390 Pfam PF00534 Glycosyl transferases group 1 197 339 3.2E-12 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AL539_RS14900 b4014c00da50fa0da35fe71dce504492 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 2.6E-90 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL539_RS14900 b4014c00da50fa0da35fe71dce504492 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL539_RS14900 b4014c00da50fa0da35fe71dce504492 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.097 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL539_RS14900 b4014c00da50fa0da35fe71dce504492 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 6.5E-83 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AL539_RS20470 b4ac5f43d201e71bc134d3812d27f3b6 352 Gene3D G3DSA:2.40.50.100 188 301 6.5E-6 T 29-03-2018 AL539_RS20470 b4ac5f43d201e71bc134d3812d27f3b6 352 Gene3D G3DSA:2.40.50.100 44 119 1.8E-11 T 29-03-2018 AL539_RS20470 b4ac5f43d201e71bc134d3812d27f3b6 352 Pfam PF13533 Biotin-lipoyl like 44 91 2.3E-14 T 29-03-2018 AL539_RS20470 b4ac5f43d201e71bc134d3812d27f3b6 352 Gene3D G3DSA:1.10.287.470 120 165 5.6E-8 T 29-03-2018 AL539_RS20470 b4ac5f43d201e71bc134d3812d27f3b6 352 Pfam PF13437 HlyD family secretion protein 200 290 3.7E-5 T 29-03-2018 AL539_RS20470 b4ac5f43d201e71bc134d3812d27f3b6 352 SUPERFAMILY SSF111369 175 243 7.06E-6 T 29-03-2018 AL539_RS20470 b4ac5f43d201e71bc134d3812d27f3b6 352 SUPERFAMILY SSF111369 44 169 6.54E-13 T 29-03-2018 AL539_RS11535 00d71c4d2277e1295b749acd223da70f 336 SUPERFAMILY SSF53474 42 324 1.62E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS11535 00d71c4d2277e1295b749acd223da70f 336 Pfam PF12146 Serine aminopeptidase, S33 53 310 8.7E-59 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AL539_RS11535 00d71c4d2277e1295b749acd223da70f 336 Gene3D G3DSA:3.40.50.1820 31 336 1.1E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS16120 7c98b35bf6da9e13f811b7502c15058d 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 2.1E-47 T 29-03-2018 IPR009912 Zinc-ribbon containing domain AL539_RS15740 dbf94931613c6a6da7ffb1873a7e5b6b 419 Pfam PF11301 Protein of unknown function (DUF3103) 63 417 9.9E-179 T 29-03-2018 IPR021452 Protein of unknown function DUF3103 AL539_RS20540 4667e283affc859513cf7e92cf6d8c9c 204 Pfam PF01810 LysE type translocator 15 202 1.2E-32 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS20540 4667e283affc859513cf7e92cf6d8c9c 204 PIRSF PIRSF006324 1 204 9.3E-42 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS11775 8e8bbbffbca3516724e1eeb47aa55101 386 SUPERFAMILY SSF103473 2 373 6.02E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS11775 8e8bbbffbca3516724e1eeb47aa55101 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL539_RS11775 8e8bbbffbca3516724e1eeb47aa55101 386 Pfam PF07690 Major Facilitator Superfamily 5 341 4.0E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS11775 8e8bbbffbca3516724e1eeb47aa55101 386 Gene3D G3DSA:1.20.1250.20 1 189 2.6E-33 T 29-03-2018 AL539_RS11775 8e8bbbffbca3516724e1eeb47aa55101 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 370 3.8E-69 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL539_RS11775 8e8bbbffbca3516724e1eeb47aa55101 386 Gene3D G3DSA:1.20.1250.20 190 384 3.1E-9 T 29-03-2018 AL539_RS17235 dffd01b4bf76879bc785be7203accb3a 290 SMART SM00978 159 290 4.2E-37 T 29-03-2018 IPR007379 Tim44-like domain AL539_RS17235 dffd01b4bf76879bc785be7203accb3a 290 Pfam PF04280 Tim44-like domain 168 289 5.6E-15 T 29-03-2018 IPR007379 Tim44-like domain AL539_RS17235 dffd01b4bf76879bc785be7203accb3a 290 SUPERFAMILY SSF54427 169 289 4.03E-16 T 29-03-2018 IPR032710 NTF2-like domain AL539_RS00095 16fdb7ca2987a4dbed108c989da56ea7 209 Pfam PF14348 Domain of unknown function (DUF4400) 29 205 2.7E-28 T 29-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type AL539_RS12055 e7c9675e211f47578ced571388bcd0a1 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 4.4E-46 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 AL539_RS12055 e7c9675e211f47578ced571388bcd0a1 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-37 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 AL539_RS14810 2b2aae0a0f61d49b737ca532d5227520 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.5E-95 T 29-03-2018 IPR005583 Peroxide stress protein YaaA AL539_RS14810 2b2aae0a0f61d49b737ca532d5227520 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 39.097 T 29-03-2018 IPR005583 Peroxide stress protein YaaA AL539_RS03315 aa189bba1d4c0d86bdb8f4ddf0de0f75 129 Gene3D G3DSA:3.40.50.300 5 113 1.7E-18 T 29-03-2018 AL539_RS03315 aa189bba1d4c0d86bdb8f4ddf0de0f75 129 Pfam PF13671 AAA domain 6 106 2.8E-13 T 29-03-2018 AL539_RS03315 aa189bba1d4c0d86bdb8f4ddf0de0f75 129 SUPERFAMILY SSF52540 5 103 1.64E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07255 6d05e574d042da6db7f99dad2be8650a 161 Gene3D G3DSA:2.40.50.140 27 130 6.4E-31 T 29-03-2018 AL539_RS07255 6d05e574d042da6db7f99dad2be8650a 161 Pfam PF03100 CcmE 4 136 2.6E-44 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL539_RS07255 6d05e574d042da6db7f99dad2be8650a 161 SUPERFAMILY SSF82093 30 142 4.05E-38 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL539_RS07255 6d05e574d042da6db7f99dad2be8650a 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.157 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AL539_RS22910 c38485edc07f99f88a43f65b7c3fc517 139 SUPERFAMILY SSF54593 3 130 8.99E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS22910 c38485edc07f99f88a43f65b7c3fc517 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 104 1.5E-10 T 29-03-2018 AL539_RS22910 c38485edc07f99f88a43f65b7c3fc517 139 Gene3D G3DSA:3.10.180.10 3 137 9.5E-22 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS03515 3d5050c0a77a9f72c803f40230ec2c75 272 SUPERFAMILY SSF53850 29 256 3.54E-33 T 29-03-2018 AL539_RS03515 3d5050c0a77a9f72c803f40230ec2c75 272 Gene3D G3DSA:3.40.190.10 115 205 3.5E-45 T 29-03-2018 AL539_RS03515 3d5050c0a77a9f72c803f40230ec2c75 272 Gene3D G3DSA:3.40.190.10 206 272 1.6E-28 T 29-03-2018 AL539_RS03515 3d5050c0a77a9f72c803f40230ec2c75 272 Pfam PF12849 PBP superfamily domain 31 247 1.5E-30 T 29-03-2018 IPR024370 PBP domain AL539_RS03515 3d5050c0a77a9f72c803f40230ec2c75 272 Gene3D G3DSA:3.40.190.10 23 114 1.0E-15 T 29-03-2018 AL539_RS22880 c2bd136bd4429f221f27c19eb9f2cc15 231 PIRSF PIRSF028137 1 231 4.3E-106 T 29-03-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane AL539_RS05130 a3586b0c16688d6f7f7dae9cbc2c9767 319 Gene3D G3DSA:3.30.200.20 2 95 5.1E-10 T 29-03-2018 AL539_RS05130 a3586b0c16688d6f7f7dae9cbc2c9767 319 Pfam PF01636 Phosphotransferase enzyme family 21 256 1.5E-25 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AL539_RS05130 a3586b0c16688d6f7f7dae9cbc2c9767 319 Gene3D G3DSA:3.90.1200.10 99 304 7.1E-19 T 29-03-2018 AL539_RS05130 a3586b0c16688d6f7f7dae9cbc2c9767 319 SUPERFAMILY SSF56112 5 268 4.37E-39 T 29-03-2018 IPR011009 Protein kinase-like domain AL539_RS21905 f0c80317fc4f246310168f8f9ab2ea0b 337 PIRSF PIRSF038896 16 336 7.4E-95 T 29-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AL539_RS21905 f0c80317fc4f246310168f8f9ab2ea0b 337 SUPERFAMILY SSF56281 77 304 3.54E-35 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS21905 f0c80317fc4f246310168f8f9ab2ea0b 337 Gene3D G3DSA:3.60.15.10 37 336 1.2E-50 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS21905 f0c80317fc4f246310168f8f9ab2ea0b 337 Pfam PF12706 Beta-lactamase superfamily domain 93 286 1.9E-41 T 29-03-2018 IPR001279 Metallo-beta-lactamase AL539_RS15000 4fc9c2a97f2d7d80fa3651aa31ac9390 370 SUPERFAMILY SSF53067 6 40 1.18E-28 T 29-03-2018 AL539_RS15000 4fc9c2a97f2d7d80fa3651aa31ac9390 370 SUPERFAMILY SSF53067 67 112 1.18E-28 T 29-03-2018 AL539_RS15000 4fc9c2a97f2d7d80fa3651aa31ac9390 370 SUPERFAMILY SSF53067 144 343 1.18E-28 T 29-03-2018 AL539_RS15000 4fc9c2a97f2d7d80fa3651aa31ac9390 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 3.6E-167 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AL539_RS15000 4fc9c2a97f2d7d80fa3651aa31ac9390 370 Gene3D G3DSA:3.30.420.40 197 370 8.5E-28 T 29-03-2018 AL539_RS15000 4fc9c2a97f2d7d80fa3651aa31ac9390 370 Gene3D G3DSA:3.30.420.40 4 183 3.3E-56 T 29-03-2018 AL539_RS15000 4fc9c2a97f2d7d80fa3651aa31ac9390 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.315 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AL539_RS01735 9a0ec4f181dd68123ec052ef43994aa6 394 Gene3D G3DSA:1.10.760.10 315 393 0.1 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL539_RS01735 9a0ec4f181dd68123ec052ef43994aa6 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.2E-186 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL539_RS01735 9a0ec4f181dd68123ec052ef43994aa6 394 SUPERFAMILY SSF48695 12 187 7.69E-60 T 29-03-2018 IPR011031 Multihaem cytochrome AL539_RS01735 9a0ec4f181dd68123ec052ef43994aa6 394 PIRSF PIRSF000014 1 394 1.9E-159 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL539_RS01735 9a0ec4f181dd68123ec052ef43994aa6 394 Gene3D G3DSA:1.10.3820.10 11 192 3.2E-26 T 29-03-2018 AL539_RS01735 9a0ec4f181dd68123ec052ef43994aa6 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 1.4E-71 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL539_RS05755 5d54f661dcaa0f45ed155f6919d59709 345 Pfam PF09375 Imelysin 47 324 1.6E-42 T 29-03-2018 IPR018976 Peptidase M75, Imelysin AL539_RS26020 1190e73769fcb3b6dc760a26322382e2 305 Gene3D G3DSA:3.40.50.1820 74 301 2.5E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS26020 1190e73769fcb3b6dc760a26322382e2 305 SUPERFAMILY SSF53474 78 302 4.89E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS26020 1190e73769fcb3b6dc760a26322382e2 305 Pfam PF01738 Dienelactone hydrolase family 92 301 8.3E-47 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL539_RS01605 17eaa29676a9e9dc2b7814eed67fb4f1 434 Gene3D G3DSA:3.40.1190.20 32 431 4.2E-42 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS01605 17eaa29676a9e9dc2b7814eed67fb4f1 434 Pfam PF00294 pfkB family carbohydrate kinase 76 292 9.5E-12 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AL539_RS01605 17eaa29676a9e9dc2b7814eed67fb4f1 434 SUPERFAMILY SSF53613 338 417 4.84E-45 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS01605 17eaa29676a9e9dc2b7814eed67fb4f1 434 SUPERFAMILY SSF53613 31 305 4.84E-45 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS19505 311a5a4663ebfac9f5896efb92b0b577 226 Pfam PF09335 SNARE associated Golgi protein 55 174 5.1E-18 T 29-03-2018 IPR032816 SNARE associated Golgi protein AL539_RS13740 e76a9d09acae2b7977c27ff7892f71f9 217 Pfam PF10986 Protein of unknown function (DUF2796) 129 212 4.7E-18 T 29-03-2018 IPR021253 Protein of unknown function DUF2796 AL539_RS13740 e76a9d09acae2b7977c27ff7892f71f9 217 Pfam PF10986 Protein of unknown function (DUF2796) 28 139 2.5E-31 T 29-03-2018 IPR021253 Protein of unknown function DUF2796 AL539_RS09355 32fa625f052262fa7c3bdedd0a11d1e5 720 Pfam PF13175 AAA ATPase domain 1 439 9.1E-43 T 29-03-2018 AL539_RS09355 32fa625f052262fa7c3bdedd0a11d1e5 720 SUPERFAMILY SSF52540 324 443 1.22E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09355 32fa625f052262fa7c3bdedd0a11d1e5 720 SUPERFAMILY SSF52540 1 177 1.22E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS09355 32fa625f052262fa7c3bdedd0a11d1e5 720 Gene3D G3DSA:3.40.50.300 1 481 1.5E-19 T 29-03-2018 AL539_RS01745 2fa76ff8989a7f64c76df86ba0cb4332 579 SUPERFAMILY SSF51445 194 526 4.59E-77 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AL539_RS01745 2fa76ff8989a7f64c76df86ba0cb4332 579 Gene3D G3DSA:3.20.20.70 184 493 2.1E-50 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS01745 2fa76ff8989a7f64c76df86ba0cb4332 579 Pfam PF02065 Melibiase 160 352 3.7E-19 T 29-03-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 AL539_RS18580 56ce4de8ce7b8e61d057cc2c805866db 551 Gene3D G3DSA:3.40.50.300 83 440 1.2E-10 T 29-03-2018 AL539_RS18580 56ce4de8ce7b8e61d057cc2c805866db 551 SUPERFAMILY SSF52540 227 410 1.86E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS18580 56ce4de8ce7b8e61d057cc2c805866db 551 Pfam PF09818 Predicted ATPase of the ABC class 1 435 3.4E-188 T 29-03-2018 IPR019195 ABC transporter, ATPase, putative AL539_RS24255 2a13bc84dab07bb57c2e1361ef3d8ab9 116 SUPERFAMILY SSF51182 2 109 3.17E-15 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS24255 2a13bc84dab07bb57c2e1361ef3d8ab9 116 Pfam PF06249 Ethanolamine utilisation protein EutQ 4 111 3.4E-15 T 29-03-2018 IPR010424 Ethanolamine utilisation EutQ AL539_RS24255 2a13bc84dab07bb57c2e1361ef3d8ab9 116 Gene3D G3DSA:2.60.120.10 1 112 2.1E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS19060 506f9fda31037382e8c9015ce690e2a4 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL539_RS19060 506f9fda31037382e8c9015ce690e2a4 128 Gene3D G3DSA:3.10.180.10 1 128 5.3E-37 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS19060 506f9fda31037382e8c9015ce690e2a4 128 SUPERFAMILY SSF54593 1 126 1.75E-36 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS19060 506f9fda31037382e8c9015ce690e2a4 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 2.2E-60 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL539_RS19060 506f9fda31037382e8c9015ce690e2a4 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.2E-24 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS02880 248a41caac9638e263ca0711c1169351 118 SUPERFAMILY SSF103481 14 112 4.05E-19 T 29-03-2018 AL539_RS02880 248a41caac9638e263ca0711c1169351 118 Pfam PF00893 Small Multidrug Resistance protein 12 101 8.8E-24 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL539_RS06800 e638e3ab7d5314fc052a922d526c2cf9 212 Pfam PF01914 MarC family integral membrane protein 8 208 2.0E-64 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS06800 e638e3ab7d5314fc052a922d526c2cf9 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 204 9.0E-66 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL539_RS06800 e638e3ab7d5314fc052a922d526c2cf9 212 Gene3D G3DSA:1.20.1250.20 1 112 2.6E-4 T 29-03-2018 AL539_RS25125 c7089bb1c3fb3038d72032ec4a5a045f 98 Pfam PF03889 Domain of unknown function 22 59 5.5E-21 T 29-03-2018 IPR005589 Protein of unknown function DUF331 AL539_RS22670 acac524d728495a4da21c54282d7c09d 405 Pfam PF13614 AAA domain 110 295 1.2E-22 T 29-03-2018 IPR025669 AAA domain AL539_RS22670 acac524d728495a4da21c54282d7c09d 405 Gene3D G3DSA:3.40.50.300 107 402 4.6E-38 T 29-03-2018 AL539_RS22670 acac524d728495a4da21c54282d7c09d 405 SUPERFAMILY SSF52540 108 367 1.68E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS07890 af99727eac26c3b7997151833b48af63 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 5.8E-20 T 29-03-2018 IPR025346 Protein of unknown function DUF4250 AL539_RS21415 375dc68aebc89dcfb351139bc2ff8112 895 PIRSF PIRSF035905 1 895 2.4E-244 T 29-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein AL539_RS21415 375dc68aebc89dcfb351139bc2ff8112 895 Pfam PF10101 Predicted membrane protein (DUF2339) 134 884 5.4E-100 T 29-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane AL539_RS04665 90cf71fc23d128e080ec7292e4b53edb 285 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 5.4E-102 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL539_RS04665 90cf71fc23d128e080ec7292e4b53edb 285 Pfam PF08543 Phosphomethylpyrimidine kinase 82 253 5.5E-21 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL539_RS04665 90cf71fc23d128e080ec7292e4b53edb 285 Gene3D G3DSA:3.40.1190.20 1 284 1.1E-54 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS04665 90cf71fc23d128e080ec7292e4b53edb 285 SUPERFAMILY SSF53613 1 276 8.89E-69 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 Gene3D G3DSA:3.40.50.1000 1 28 0.18 T 29-03-2018 IPR023214 HAD-like domain AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.3E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.3E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.3E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 7.3E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 7.4E-32 T 29-03-2018 IPR023214 HAD-like domain AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 SUPERFAMILY SSF56784 4 188 1.93E-46 T 29-03-2018 IPR023214 HAD-like domain AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 Gene3D G3DSA:1.10.150.240 29 71 1.2E-17 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 Gene3D G3DSA:3.40.50.1000 72 218 6.4E-28 T 29-03-2018 IPR023214 HAD-like domain AL539_RS19720 071825633871c3d6117ead06b9872fa6 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 185 2.7E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AL539_RS05770 cdf465fff2f3df7413f30a0cd88298e5 198 Pfam PF00925 GTP cyclohydrolase II 19 171 6.3E-59 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS05770 cdf465fff2f3df7413f30a0cd88298e5 198 SUPERFAMILY SSF142695 19 172 5.1E-54 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS05770 cdf465fff2f3df7413f30a0cd88298e5 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 37.878 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AL539_RS10475 5cfff304d6e42e4a965ccb80bd46e163 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 9.0E-21 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AL539_RS10475 5cfff304d6e42e4a965ccb80bd46e163 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 7.6E-32 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AL539_RS04510 d63e8ab378cfb2de9705ffeb2f74d2b2 211 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 85 210 2.0E-44 T 29-03-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AL539_RS04510 d63e8ab378cfb2de9705ffeb2f74d2b2 211 SUPERFAMILY SSF140591 91 191 3.01E-7 T 29-03-2018 AL539_RS04510 d63e8ab378cfb2de9705ffeb2f74d2b2 211 Pfam PF09025 YopR, type III needle-polymerisation regulator 72 211 3.5E-52 T 29-03-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 SUPERFAMILY SSF54373 270 360 9.16E-18 T 29-03-2018 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 Gene3D G3DSA:3.30.9.10 217 350 8.3E-26 T 29-03-2018 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.221 T 29-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 SUPERFAMILY SSF51905 1 54 3.63E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 SUPERFAMILY SSF51905 360 417 3.63E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 SUPERFAMILY SSF51905 107 270 3.63E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 Gene3D G3DSA:3.50.50.60 351 410 4.1E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 Gene3D G3DSA:3.40.50.720 1 111 4.4E-9 T 29-03-2018 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 1.1E-70 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS15425 30eeb7527a44c869853d65e1d9246b7b 418 Gene3D G3DSA:3.30.9.10 134 216 2.6E-7 T 29-03-2018 AL539_RS21370 0ab1b364e98d74131594206ee81a8eb2 203 Pfam PF01810 LysE type translocator 13 201 3.6E-33 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS21370 0ab1b364e98d74131594206ee81a8eb2 203 PIRSF PIRSF006324 1 203 5.4E-49 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS03115 62965c11f1131392f932aca2f3056ec8 207 Pfam PF01810 LysE type translocator 15 203 1.9E-35 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS03115 62965c11f1131392f932aca2f3056ec8 207 PIRSF PIRSF006324 1 207 1.1E-61 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS17855 2967def12b9dc15704ae55e5a5f652e0 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 6.9E-26 T 29-03-2018 IPR009576 Biofilm formation YgiB AL539_RS03640 147653d4fa18075218e2393d5f42afa4 308 Pfam PF15575 Immunity protein 49 75 292 5.5E-42 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS13200 0a08b4fb7fabae100ee259e68dc7c50c 348 Gene3D G3DSA:3.40.50.2000 4 157 1.6E-34 T 29-03-2018 AL539_RS13200 0a08b4fb7fabae100ee259e68dc7c50c 348 Gene3D G3DSA:3.40.50.2000 165 348 2.6E-38 T 29-03-2018 AL539_RS13200 0a08b4fb7fabae100ee259e68dc7c50c 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 311 2.5E-52 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AL539_RS13200 0a08b4fb7fabae100ee259e68dc7c50c 348 SUPERFAMILY SSF53756 10 346 8.79E-82 T 29-03-2018 AL539_RS01230 45e1857fa710a7cfb14ed3eac2cf24e6 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.767 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL539_RS01230 45e1857fa710a7cfb14ed3eac2cf24e6 149 Pfam PF06610 L-alanine exporter 8 142 8.8E-69 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL539_RS01230 45e1857fa710a7cfb14ed3eac2cf24e6 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-65 T 29-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL539_RS13810 bf3e93f6c6241dbec2dc964611b93f9d 426 SUPERFAMILY SSF56935 27 426 7.78E-58 T 29-03-2018 AL539_RS13810 bf3e93f6c6241dbec2dc964611b93f9d 426 Gene3D G3DSA:2.40.160.60 26 426 7.4E-56 T 29-03-2018 AL539_RS13810 bf3e93f6c6241dbec2dc964611b93f9d 426 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 426 3.5E-62 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL539_RS17015 3062e1f7c0d3b3a5d5b811ccd9d89260 186 Pfam PF04279 Intracellular septation protein A 3 157 2.4E-6 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AL539_RS00830 5b3ff17f3a734fad19e88adaeea30579 317 Pfam PF11348 Protein of unknown function (DUF3150) 6 259 7.5E-101 T 29-03-2018 IPR021496 Protein of unknown function DUF3150 AL539_RS00450 9924fd6cb1bad1a345e866c4683f1211 79 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 57 3.0E-7 T 29-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 AL539_RS00450 9924fd6cb1bad1a345e866c4683f1211 79 Gene3D G3DSA:1.10.10.10 1 70 1.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS00450 9924fd6cb1bad1a345e866c4683f1211 79 SUPERFAMILY SSF46785 5 69 2.49E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18400 9924fd6cb1bad1a345e866c4683f1211 79 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 57 3.0E-7 T 29-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 AL539_RS18400 9924fd6cb1bad1a345e866c4683f1211 79 Gene3D G3DSA:1.10.10.10 1 70 1.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS18400 9924fd6cb1bad1a345e866c4683f1211 79 SUPERFAMILY SSF46785 5 69 2.49E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS22170 51ef8cfe33ef09567bca714b0282457e 241 SMART SM00014 77 225 1.0E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS22170 51ef8cfe33ef09567bca714b0282457e 241 Gene3D G3DSA:1.20.144.10 31 230 3.5E-20 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS22170 51ef8cfe33ef09567bca714b0282457e 241 SUPERFAMILY SSF48317 27 113 1.03E-20 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS22170 51ef8cfe33ef09567bca714b0282457e 241 SUPERFAMILY SSF48317 143 224 1.03E-20 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS22170 51ef8cfe33ef09567bca714b0282457e 241 Pfam PF01569 PAP2 superfamily 83 227 1.4E-17 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_RS01975 bc0b0ad24cd8c1394b991a88c2a8bc42 400 SUPERFAMILY SSF103473 8 398 6.41E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AL539_RS01975 bc0b0ad24cd8c1394b991a88c2a8bc42 400 Pfam PF07690 Major Facilitator Superfamily 24 364 6.7E-49 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL539_RS01975 bc0b0ad24cd8c1394b991a88c2a8bc42 400 Gene3D G3DSA:1.20.1250.20 205 400 4.7E-13 T 29-03-2018 AL539_RS01975 bc0b0ad24cd8c1394b991a88c2a8bc42 400 Gene3D G3DSA:1.20.1250.20 2 204 6.1E-33 T 29-03-2018 AL539_RS01975 bc0b0ad24cd8c1394b991a88c2a8bc42 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 3.2E-117 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AL539_RS00425 dea693f4f427f2aaa5ffd70db5855c88 320 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 81 157 6.8E-26 T 29-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 AL539_RS00425 dea693f4f427f2aaa5ffd70db5855c88 320 PRINTS PR00394 RHS protein signature 101 121 3.3E-14 T 29-03-2018 IPR001826 RHS protein AL539_RS00425 dea693f4f427f2aaa5ffd70db5855c88 320 PRINTS PR00394 RHS protein signature 124 143 3.3E-14 T 29-03-2018 IPR001826 RHS protein AL539_RS00425 dea693f4f427f2aaa5ffd70db5855c88 320 PRINTS PR00394 RHS protein signature 48 68 3.3E-14 T 29-03-2018 IPR001826 RHS protein AL539_RS00425 dea693f4f427f2aaa5ffd70db5855c88 320 Pfam PF03527 RHS protein 54 88 1.0E-14 T 29-03-2018 IPR001826 RHS protein AL539_RS00425 dea693f4f427f2aaa5ffd70db5855c88 320 Gene3D G3DSA:2.140.10.10 6 320 1.9E-4 T 29-03-2018 AL539_RS18815 36681985ee544d386f9ad597fd191e8e 272 SMART SM00052 13 260 4.2E-13 T 29-03-2018 IPR001633 EAL domain AL539_RS18815 36681985ee544d386f9ad597fd191e8e 272 Pfam PF00563 EAL domain 21 255 1.6E-42 T 29-03-2018 IPR001633 EAL domain AL539_RS18815 36681985ee544d386f9ad597fd191e8e 272 Gene3D G3DSA:3.20.20.450 19 267 1.4E-46 T 29-03-2018 IPR001633 EAL domain AL539_RS18815 36681985ee544d386f9ad597fd191e8e 272 SUPERFAMILY SSF141868 23 263 1.18E-49 T 29-03-2018 IPR001633 EAL domain AL539_RS20200 f328b31f4af5fe404f6564d6efb6516c 137 Gene3D G3DSA:1.10.260.40 3 136 1.6E-6 T 29-03-2018 AL539_RS20200 f328b31f4af5fe404f6564d6efb6516c 137 SUPERFAMILY SSF47413 2 61 7.5E-6 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS20360 d8374adc86d8dcc2b279bd9ac65f3594 102 Pfam PF03927 NapD protein 6 80 2.8E-29 T 29-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AL539_RS03945 237e28e4500f468a05e1abb48026b659 416 Pfam PF04403 Paraquat-inducible protein A 54 205 7.7E-37 T 29-03-2018 IPR007498 Paraquat-inducible protein A AL539_RS03945 237e28e4500f468a05e1abb48026b659 416 Pfam PF04403 Paraquat-inducible protein A 248 403 8.3E-47 T 29-03-2018 IPR007498 Paraquat-inducible protein A AL539_RS03945 237e28e4500f468a05e1abb48026b659 416 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 402 1.8E-105 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 AL539_RS14750 e5f4861850e6806d652c006cf936f597 25 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 3 24 1.8E-6 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 AL539_RS10945 96a99443bda0f408b32bc026502cbf68 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 2.8E-35 T 29-03-2018 IPR019886 Sodium symporter small subunit, predicted AL539_RS10945 96a99443bda0f408b32bc026502cbf68 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.3E-33 T 29-03-2018 IPR019886 Sodium symporter small subunit, predicted AL539_RS17295 f13d1f861dbfd75bf443da3431409cf7 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 2.1E-42 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS17295 f13d1f861dbfd75bf443da3431409cf7 364 Gene3D G3DSA:3.40.50.1100 141 329 3.7E-37 T 29-03-2018 AL539_RS17295 f13d1f861dbfd75bf443da3431409cf7 364 Gene3D G3DSA:3.40.50.1100 34 140 2.6E-25 T 29-03-2018 AL539_RS17295 f13d1f861dbfd75bf443da3431409cf7 364 SUPERFAMILY SSF53686 23 336 2.1E-71 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_RS23785 427ddc510bd38bef4b4184e1ab818f07 479 Pfam PF03929 PepSY-associated TM region 24 416 1.1E-63 T 29-03-2018 IPR005625 PepSY-associated TM protein AL539_RS23785 427ddc510bd38bef4b4184e1ab818f07 479 Gene3D G3DSA:1.20.950.20 159 296 6.3E-4 T 29-03-2018 AL539_RS17730 329ad51478cf866bc5d1a2f6ee80275a 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 6.3E-109 T 29-03-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase AL539_RS17730 329ad51478cf866bc5d1a2f6ee80275a 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 5.6E-58 T 29-03-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices AL539_RS17900 29083384154728df95ea95be8ea5a85f 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 3.6E-60 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL539_RS17900 29083384154728df95ea95be8ea5a85f 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 9.8E-62 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL539_RS17900 29083384154728df95ea95be8ea5a85f 176 PIRSF PIRSF028301 1 174 1.2E-66 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL539_RS20240 3b13c621cb6b6145a88f70668beae7d3 164 Gene3D G3DSA:3.40.190.10 1 158 6.9E-4 T 29-03-2018 AL539_RS01155 7c6ea1e7ca12b23e8a1c23297a9d9e16 434 Pfam PF11348 Protein of unknown function (DUF3150) 7 266 1.4E-81 T 29-03-2018 IPR021496 Protein of unknown function DUF3150 AL539_RS22440 490e0af0fc648248eccb87bd6a6a8910 285 Gene3D G3DSA:3.40.50.1820 37 283 1.1E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS22440 490e0af0fc648248eccb87bd6a6a8910 285 Pfam PF12146 Serine aminopeptidase, S33 83 192 9.1E-13 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AL539_RS22440 490e0af0fc648248eccb87bd6a6a8910 285 SUPERFAMILY SSF53474 33 267 9.28E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS21275 0efa7e8644d9bee61c4b6dbd3aae28dc 259 Pfam PF13489 Methyltransferase domain 64 210 2.5E-7 T 29-03-2018 AL539_RS21275 0efa7e8644d9bee61c4b6dbd3aae28dc 259 Gene3D G3DSA:3.40.50.150 5 250 2.8E-12 T 29-03-2018 AL539_RS21275 0efa7e8644d9bee61c4b6dbd3aae28dc 259 SUPERFAMILY SSF53335 144 228 1.26E-11 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS21275 0efa7e8644d9bee61c4b6dbd3aae28dc 259 SUPERFAMILY SSF53335 60 114 1.26E-11 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS18820 b9f0b3d3eebc0d4a6c2ed257cda9f89e 177 Gene3D G3DSA:3.10.290.10 9 88 1.2E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AL539_RS18820 b9f0b3d3eebc0d4a6c2ed257cda9f89e 177 SUPERFAMILY SSF55174 14 87 5.1E-17 T 29-03-2018 AL539_RS18820 b9f0b3d3eebc0d4a6c2ed257cda9f89e 177 Pfam PF13275 S4 domain 25 86 9.9E-22 T 29-03-2018 AL539_RS04400 1e8450e94762b97cf3e831905087e40e 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 4.1E-26 T 29-03-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related AL539_RS04400 1e8450e94762b97cf3e831905087e40e 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 2.0E-31 T 29-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AL539_RS04400 1e8450e94762b97cf3e831905087e40e 94 Pfam PF09059 TyeA 7 86 6.6E-32 T 29-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AL539_RS04400 1e8450e94762b97cf3e831905087e40e 94 SUPERFAMILY SSF140591 3 92 2.04E-30 T 29-03-2018 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 469 486 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 444 459 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 249 265 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 426 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 7.4E-57 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 568 3.2E-115 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 SUPERFAMILY SSF56235 27 568 9.07E-144 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_RS14360 bf1444da0b2d95e1f955ceb2000c960b 576 Pfam PF01019 Gamma-glutamyltranspeptidase 49 568 1.7E-138 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AL539_RS16125 60e843767feaa66d8f2e8f559e03892e 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 9.0E-37 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS16125 60e843767feaa66d8f2e8f559e03892e 505 SUPERFAMILY SSF56317 213 485 7.06E-40 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS16125 60e843767feaa66d8f2e8f559e03892e 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 2.5E-97 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL539_RS16125 60e843767feaa66d8f2e8f559e03892e 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.406 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL539_RS16125 60e843767feaa66d8f2e8f559e03892e 505 Gene3D G3DSA:3.60.110.10 205 484 1.7E-39 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AL539_RS04635 7e13685ac85728d2a04695dc91fcea7b 326 SUPERFAMILY SSF111369 131 158 6.54E-10 T 29-03-2018 AL539_RS04635 7e13685ac85728d2a04695dc91fcea7b 326 SUPERFAMILY SSF111369 192 324 6.54E-10 T 29-03-2018 AL539_RS04635 7e13685ac85728d2a04695dc91fcea7b 326 SUPERFAMILY SSF111369 44 97 6.54E-10 T 29-03-2018 AL539_RS04635 7e13685ac85728d2a04695dc91fcea7b 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.6E-12 T 29-03-2018 AL539_RS04635 7e13685ac85728d2a04695dc91fcea7b 326 Gene3D G3DSA:2.40.50.100 41 237 1.1E-15 T 29-03-2018 AL539_RS04635 7e13685ac85728d2a04695dc91fcea7b 326 Pfam PF13437 HlyD family secretion protein 208 312 2.1E-8 T 29-03-2018 AL539_RS17550 c9fe8ddb2e23473080937018ec9c0496 907 SMART SM01276 453 776 7.6E-49 T 29-03-2018 IPR031161 Peptidase family M60 domain AL539_RS17550 c9fe8ddb2e23473080937018ec9c0496 907 Pfam PF17291 N-terminal domain of M60-like peptidases 449 537 2.8E-5 T 29-03-2018 IPR035423 M60-like domain, N-terminal AL539_RS19885 64c86964b5ec0e0b971a8265a69b27d1 63 Gene3D G3DSA:2.20.25.10 3 41 4.5E-4 T 29-03-2018 AL539_RS21700 18b246b11e49013af7fef19d947a69fb 228 SUPERFAMILY SSF46785 1 61 3.29E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS21700 18b246b11e49013af7fef19d947a69fb 228 Pfam PF08279 HTH domain 6 59 1.8E-18 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AL539_RS21700 18b246b11e49013af7fef19d947a69fb 228 Pfam PF13280 WYL domain 140 226 2.4E-18 T 29-03-2018 IPR026881 WYL domain AL539_RS21700 18b246b11e49013af7fef19d947a69fb 228 Gene3D G3DSA:1.10.10.10 1 64 1.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS01165 4f0535eb3f307a1d2a626bc26b0e3e23 334 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 37 195 1.4E-23 T 29-03-2018 IPR010183 Bacteriophage lambda, Bet AL539_RS01165 4f0535eb3f307a1d2a626bc26b0e3e23 334 Pfam PF03837 RecT family 42 199 1.4E-22 T 29-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 AL539_RS10470 94815afcc1b8d67b4c7ce864608d330f 183 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 3.7E-12 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL539_RS10470 94815afcc1b8d67b4c7ce864608d330f 183 Gene3D G3DSA:3.10.50.40 1 170 7.8E-30 T 29-03-2018 AL539_RS10470 94815afcc1b8d67b4c7ce864608d330f 183 SUPERFAMILY SSF54534 2 140 3.34E-34 T 29-03-2018 AL539_RS19985 188eeef9719a0221103c0636b4716d2f 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 1.6E-179 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL539_RS19985 188eeef9719a0221103c0636b4716d2f 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 3.5E-218 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL539_RS21400 3a302954d1722c2b6245c27cae98ce84 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 3.1E-19 T 29-03-2018 IPR021379 Protein of unknown function DUF3012 AL539_RS21400 3a302954d1722c2b6245c27cae98ce84 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 1.1E-20 T 29-03-2018 IPR021379 Protein of unknown function DUF3012 AL539_RS17870 cb8c500e5519509b537a6af2b120c864 106 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 105 1.5E-16 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AL539_RS03250 da0e5b6ace59ad45562c89f5fb2b6155 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 4.7E-54 T 29-03-2018 IPR021212 Domain of unknown function DUF2760 AL539_RS02755 0cc3d95d20374301f1ab96d19310054b 494 Pfam PF03553 Na+/H+ antiporter family 227 494 5.3E-29 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL539_RS11550 9fb24bf0ba336685febfeffcde410173 516 PIRSF PIRSF028175 1 516 1.0E-303 T 29-03-2018 IPR014540 Uncharacterised conserved protein UCP028175 AL539_RS02100 7340d5d2a5c76f697757c00987d9d08b 422 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.6E-38 T 29-03-2018 IPR010352 Protein of unknown function DUF945 AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.3E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 Gene3D G3DSA:1.10.10.10 2 86 8.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 SUPERFAMILY SSF53850 88 295 1.81E-38 T 29-03-2018 AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 SUPERFAMILY SSF46785 2 84 1.62E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 Pfam PF03466 LysR substrate binding domain 92 296 2.2E-23 T 29-03-2018 IPR005119 LysR, substrate-binding AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 Gene3D G3DSA:3.40.190.10 92 180 2.1E-13 T 29-03-2018 AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 Gene3D G3DSA:3.40.190.10 181 268 1.2E-13 T 29-03-2018 AL539_RS20545 a308f3220dfd4493be4609c4c42629d4 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 8.3E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL539_RS23470 81118dd98e559b6c4e0327a3e8e9affe 150 Pfam PF13279 Thioesterase-like superfamily 16 134 3.0E-20 T 29-03-2018 AL539_RS23470 81118dd98e559b6c4e0327a3e8e9affe 150 Gene3D G3DSA:3.10.129.10 4 142 7.2E-34 T 29-03-2018 AL539_RS23470 81118dd98e559b6c4e0327a3e8e9affe 150 SUPERFAMILY SSF54637 4 138 2.92E-33 T 29-03-2018 IPR029069 HotDog domain AL539_RS13980 808bf83ccdb751bb9744d1eac612f8ad 781 Gene3D G3DSA:2.60.450.10 47 200 1.6E-19 T 29-03-2018 AL539_RS13980 808bf83ccdb751bb9744d1eac612f8ad 781 Pfam PF03968 OstA-like protein 58 189 1.3E-16 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL539_RS13980 808bf83ccdb751bb9744d1eac612f8ad 781 Pfam PF04453 Organic solvent tolerance protein 297 682 5.1E-113 T 29-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AL539_RS13980 808bf83ccdb751bb9744d1eac612f8ad 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 753 20.727 T 29-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 SUPERFAMILY SSF143800 1 68 2.12E-27 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 8.7E-36 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 Pfam PF01197 Ribosomal protein L31 1 66 1.9E-32 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.4E-23 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.4E-23 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.4E-23 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.691 T 29-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS13515 7ac43f0a0df52bd197cb78a400fbeff7 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 SUPERFAMILY SSF53335 96 566 1.63E-138 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 SUPERFAMILY SSF53335 10 49 1.63E-138 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 Pfam PF02384 N-6 DNA Methylase 190 526 2.6E-116 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 237 251 3.8E-19 T 29-03-2018 AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 214 230 3.8E-19 T 29-03-2018 AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 353 377 3.8E-19 T 29-03-2018 AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 319 331 3.8E-19 T 29-03-2018 AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 Gene3D G3DSA:3.40.50.150 212 520 7.6E-63 T 29-03-2018 AL539_RS25325 dea022620e8670c07b135525c6f03b62 567 Pfam PF12161 HsdM N-terminal domain 12 178 2.9E-23 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_RS13875 e6ccc462dcc73da5bb9ba32cf1207ac8 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 336 1.8E-89 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL539_RS13875 e6ccc462dcc73da5bb9ba32cf1207ac8 358 Gene3D G3DSA:3.20.20.70 1 358 1.4E-124 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL539_RS13875 e6ccc462dcc73da5bb9ba32cf1207ac8 358 SUPERFAMILY SSF51395 6 357 1.62E-115 T 29-03-2018 AL539_RS02785 56f66e6fc9fdc6c2c06861b600399fb1 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 1.7E-55 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL539_RS02785 56f66e6fc9fdc6c2c06861b600399fb1 425 Gene3D G3DSA:3.50.50.60 16 403 2.0E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02785 56f66e6fc9fdc6c2c06861b600399fb1 425 SUPERFAMILY SSF51905 28 251 2.46E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02785 56f66e6fc9fdc6c2c06861b600399fb1 425 SUPERFAMILY SSF51905 353 409 2.46E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL539_RS02995 4fa3c47c747e47294f07879c2be7d614 262 Gene3D G3DSA:3.90.1580.10 24 87 6.5E-13 T 29-03-2018 AL539_RS02995 4fa3c47c747e47294f07879c2be7d614 262 Gene3D G3DSA:3.90.1580.10 88 262 1.4E-43 T 29-03-2018 AL539_RS02995 4fa3c47c747e47294f07879c2be7d614 262 Pfam PF03781 Sulfatase-modifying factor enzyme 1 38 259 4.8E-47 T 29-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL539_RS02995 4fa3c47c747e47294f07879c2be7d614 262 SUPERFAMILY SSF56436 37 261 7.3E-57 T 29-03-2018 IPR016187 C-type lectin fold AL539_RS20010 e231a7e44b1e025055d78fa084dace05 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 1.9E-69 T 29-03-2018 IPR018683 Domain of unknown function DUF2169 AL539_RS01825 33d1b7b8c5ced5ec1cb3636652421359 188 Gene3D G3DSA:1.10.340.30 4 185 8.6E-78 T 29-03-2018 AL539_RS01825 33d1b7b8c5ced5ec1cb3636652421359 188 Pfam PF03352 Methyladenine glycosylase 9 184 5.5E-73 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL539_RS01825 33d1b7b8c5ced5ec1cb3636652421359 188 SUPERFAMILY SSF48150 5 186 2.82E-74 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL539_RS14915 785f4e7fb04888c678140a0dfac6a8f3 382 Pfam PF02690 Na+/Pi-cotransporter 218 333 1.2E-18 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL539_RS14915 785f4e7fb04888c678140a0dfac6a8f3 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 2.0E-22 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL539_RS01725 ee5984b279f1e8c00a40c807aa9d1d3b 270 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 247 9.9E-72 T 29-03-2018 IPR005226 UPF0014 family AL539_RS00890 7bd10f095aa1409e4a0792966fe08080 116 Gene3D G3DSA:3.30.2310.20 1 100 6.5E-4 T 29-03-2018 AL539_RS00890 7bd10f095aa1409e4a0792966fe08080 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 105 8.3E-22 T 29-03-2018 IPR009241 Toxin HigB-like AL539_RS05480 27e8a4097d70aeaa28798bf87c41cce7 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 9.9E-16 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS20305 b0f0d102f5eda4fadb0c01d29e707bdc 137 SUPERFAMILY SSF75620 7 117 1.37E-12 T 29-03-2018 AL539_RS20305 b0f0d102f5eda4fadb0c01d29e707bdc 137 Pfam PF00472 RF-1 domain 7 132 3.9E-24 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL539_RS20305 b0f0d102f5eda4fadb0c01d29e707bdc 137 Gene3D G3DSA:3.30.160.20 1 136 3.2E-40 T 29-03-2018 AL539_RS20305 b0f0d102f5eda4fadb0c01d29e707bdc 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 2136 2234 2.3E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 1475 1567 5.3E-18 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3815 3911 5.7E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3720 3814 9.7E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 1376 1474 7.5E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5344 5438 5.4E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4101 4195 2.2E-15 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3238 3335 6.5E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4672 4772 1.3E-15 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3041 3145 6.3E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5919 6019 1.9E-11 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3336 3428 9.8E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 514 611 8.4E-15 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4864 4960 8.1E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3146 3237 2.8E-17 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 900 992 1.1E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4005 4100 4.5E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 612 706 3.4E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 2332 2427 9.2E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 1663 1761 2.0E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 6114 6211 1.7E-7 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4196 4290 7.2E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3622 3719 3.5E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 325 420 8.8E-16 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3429 3528 3.8E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5823 5918 4.7E-12 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4961 5055 3.5E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4291 4384 4.5E-12 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 2235 2331 7.7E-12 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 1283 1375 5.3E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5056 5155 8.9E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4554 4671 2.2E-6 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5156 5247 3.6E-17 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 6327 6423 3.8E-6 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 421 513 6.9E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 1089 1183 1.1E-16 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5631 5728 2.3E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 2621 2713 1.3E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 707 799 2.8E-17 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 800 899 1.4E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 6512 6615 8.4E-4 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5248 5343 1.6E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 224 324 2.9E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 993 1088 8.2E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 2032 2135 1.4E-12 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 2525 2620 4.9E-15 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3529 3621 5.1E-18 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 6020 6113 5.6E-10 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5538 5630 4.8E-17 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 1568 1662 3.7E-14 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 4775 4863 7.6E-17 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5439 5537 5.6E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 5729 5822 1.4E-13 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 6424 6511 1.7E-6 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 3917 4004 2.6E-17 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 2428 2524 1.9E-10 T 29-03-2018 AL539_RS25175 50e4745965bf031181807446bf25f6da 6799 Gene3D G3DSA:2.60.120.640 1184 1282 2.9E-12 T 29-03-2018 AL539_RS22525 d446b7a41bb699876534778e05988eb5 408 Pfam PF03616 Sodium/glutamate symporter 7 376 5.8E-151 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL539_RS22525 d446b7a41bb699876534778e05988eb5 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.713 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL539_RS22525 d446b7a41bb699876534778e05988eb5 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 2.6E-135 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL539_RS04690 33bce4a8f867c2e8cb7b3927b7eeb575 451 Pfam PF04632 Fusaric acid resistance protein family 9 245 5.3E-35 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AL539_RS04715 891a12a495907fd94cafd3d58a484882 154 PIRSF PIRSF012335 1 154 6.3E-66 T 29-03-2018 IPR016596 Protein of unknown function UCP012335 AL539_RS04715 891a12a495907fd94cafd3d58a484882 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 4.1E-30 T 29-03-2018 IPR022548 Domain of unknown function DUF2846 AL539_RS21495 73e6575da6976d1d6840907e84819a5f 248 Pfam PF01464 Transglycosylase SLT domain 79 187 1.3E-29 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AL539_RS21495 73e6575da6976d1d6840907e84819a5f 248 SUPERFAMILY SSF53955 28 207 2.08E-38 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS21495 73e6575da6976d1d6840907e84819a5f 248 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 93 121 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL539_RS21495 73e6575da6976d1d6840907e84819a5f 248 Gene3D G3DSA:1.10.530.10 39 211 4.2E-34 T 29-03-2018 AL539_RS20855 4552b8a57ed1172720b6fe08450d232f 79 Pfam PF04325 Protein of unknown function (DUF465) 29 74 7.7E-11 T 29-03-2018 IPR007420 Protein of unknown function DUF465 AL539_RS02005 a7a304b559ea7eecccc364198862ed82 374 Gene3D G3DSA:2.40.370.10 252 374 2.6E-31 T 29-03-2018 IPR023374 AttH-like domain AL539_RS02005 a7a304b559ea7eecccc364198862ed82 374 Gene3D G3DSA:2.40.370.10 67 251 9.0E-50 T 29-03-2018 IPR023374 AttH-like domain AL539_RS02005 a7a304b559ea7eecccc364198862ed82 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 3.7E-45 T 29-03-2018 IPR010791 AttH domain AL539_RS02005 a7a304b559ea7eecccc364198862ed82 374 SUPERFAMILY SSF159245 56 374 1.44E-94 T 29-03-2018 AL539_RS02005 a7a304b559ea7eecccc364198862ed82 374 Pfam PF17186 Lipocalin-like domain 252 374 4.7E-34 T 29-03-2018 AL539_RS23855 73396542efd23664c02f32e38d0bbe2e 181 Pfam PF05229 Spore Coat Protein U domain 29 178 6.6E-21 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS23855 73396542efd23664c02f32e38d0bbe2e 181 SMART SM00972 122 178 1.0E-5 T 29-03-2018 IPR007893 Spore coat protein U AL539_RS21250 341d95c05de6bf83b969a81499b71139 258 Pfam PF06629 MltA-interacting protein MipA 41 258 9.4E-41 T 29-03-2018 IPR010583 MltA-interacting MipA AL539_RS07110 e34959cdba291511a6bc2feeec9d5591 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 1.4E-72 T 29-03-2018 IPR007411 Elongation factor P hydroxylase AL539_RS22705 419e6f21f761327beb9695310bb583d6 351 Gene3D G3DSA:2.40.160.10 31 350 1.9E-30 T 29-03-2018 AL539_RS22705 419e6f21f761327beb9695310bb583d6 351 SUPERFAMILY SSF56935 25 349 2.56E-39 T 29-03-2018 AL539_RS25250 1f074b940f94d53e140afbd4282fac4d 589 Gene3D G3DSA:2.130.10.10 124 547 3.0E-17 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AL539_RS25250 1f074b940f94d53e140afbd4282fac4d 589 SUPERFAMILY SSF75011 144 222 2.22E-15 T 29-03-2018 AL539_RS25250 1f074b940f94d53e140afbd4282fac4d 589 SUPERFAMILY SSF75011 249 338 2.22E-15 T 29-03-2018 AL539_RS25250 1f074b940f94d53e140afbd4282fac4d 589 SUPERFAMILY SSF75011 422 518 2.22E-15 T 29-03-2018 AL539_RS25250 1f074b940f94d53e140afbd4282fac4d 589 SUPERFAMILY SSF75011 69 85 2.22E-15 T 29-03-2018 AL539_RS05795 e2afe8b2ee9c69daa3fecaa8d248bcc7 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 1.1E-147 T 29-03-2018 IPR017566 NrfD AL539_RS05795 e2afe8b2ee9c69daa3fecaa8d248bcc7 323 Gene3D G3DSA:1.20.1630.10 6 323 1.5E-53 T 29-03-2018 AL539_RS05795 e2afe8b2ee9c69daa3fecaa8d248bcc7 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 5.9E-80 T 29-03-2018 IPR005614 NrfD family AL539_RS04920 5fe63ec19776900c67dac3c1753ca792 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 7.6E-12 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS25950 c302df6a53d67db16f288f5a8fbcf177 399 Gene3D G3DSA:2.40.50.140 170 258 8.7E-7 T 29-03-2018 AL539_RS20390 b8274a84a2873fcc4d6492c54c8a96d3 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 3.0E-55 T 29-03-2018 IPR014176 Phasin, subfamily 3 AL539_RS20390 b8274a84a2873fcc4d6492c54c8a96d3 115 Pfam PF09361 Phasin protein 8 108 1.1E-20 T 29-03-2018 IPR018968 Phasin AL539_RS20390 b8274a84a2873fcc4d6492c54c8a96d3 115 PIRSF PIRSF028226 1 115 5.2E-56 T 29-03-2018 IPR014176 Phasin, subfamily 3 AL539_RS04570 ec32e801e70d2176754381f5ba0b6a1d 506 Gene3D G3DSA:3.40.309.10 280 480 2.7E-68 T 29-03-2018 AL539_RS04570 ec32e801e70d2176754381f5ba0b6a1d 506 Gene3D G3DSA:3.40.605.10 7 279 6.1E-91 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS04570 ec32e801e70d2176754381f5ba0b6a1d 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AL539_RS04570 ec32e801e70d2176754381f5ba0b6a1d 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AL539_RS04570 ec32e801e70d2176754381f5ba0b6a1d 506 SUPERFAMILY SSF53720 13 497 3.53E-162 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS04570 ec32e801e70d2176754381f5ba0b6a1d 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 5.9E-166 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS06235 c5f3acb55dc61d5923768f47f14a88e3 376 Gene3D G3DSA:1.20.1630.10 6 320 1.0E-45 T 29-03-2018 AL539_RS06235 c5f3acb55dc61d5923768f47f14a88e3 376 Pfam PF03916 Polysulphide reductase, NrfD 9 318 4.6E-20 T 29-03-2018 IPR005614 NrfD family AL539_RS08765 40fa1e878eb997f174cfb9dce308fbac 64 Gene3D G3DSA:3.30.50.10 2 60 1.0E-24 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AL539_RS08765 40fa1e878eb997f174cfb9dce308fbac 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 4.1E-24 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL539_RS08765 40fa1e878eb997f174cfb9dce308fbac 64 SUPERFAMILY SSF57716 2 62 3.42E-21 T 29-03-2018 AL539_RS08765 40fa1e878eb997f174cfb9dce308fbac 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.263 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL539_RS13895 05680303526b6e9bae4d7bda4b33cb04 322 Pfam PF16868 NMT1-like family 30 319 4.8E-96 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL539_RS13895 05680303526b6e9bae4d7bda4b33cb04 322 Gene3D G3DSA:3.40.190.10 170 321 3.6E-40 T 29-03-2018 AL539_RS13895 05680303526b6e9bae4d7bda4b33cb04 322 Gene3D G3DSA:3.40.190.10 22 163 1.1E-26 T 29-03-2018 AL539_RS13895 05680303526b6e9bae4d7bda4b33cb04 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 2.6E-113 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL539_RS13895 05680303526b6e9bae4d7bda4b33cb04 322 SUPERFAMILY SSF53850 25 321 6.38E-88 T 29-03-2018 AL539_RS20430 4acb8d15efd95f3e108f04356dd7bc32 222 Pfam PF08239 Bacterial SH3 domain 72 122 9.3E-10 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AL539_RS20430 4acb8d15efd95f3e108f04356dd7bc32 222 Gene3D G3DSA:2.40.50.110 27 130 7.3E-10 T 29-03-2018 AL539_RS06980 aaa97206edf3c029139ec5dd714b35f8 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 2.7E-6 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL539_RS23155 4984266ab1cde90bec4cb43f1689bfcd 334 SUPERFAMILY SSF51182 12 328 1.82E-23 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS23155 4984266ab1cde90bec4cb43f1689bfcd 334 Gene3D G3DSA:2.60.120.10 41 139 2.5E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS23155 4984266ab1cde90bec4cb43f1689bfcd 334 Gene3D G3DSA:2.60.120.10 229 332 4.2E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS01300 ea4fc57ced16507f490735316be642a8 88 Gene3D G3DSA:1.10.10.10 6 86 3.1E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS24645 ad8a2f472912cb6fc7a57ad8eec900ce 90 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 6.4E-23 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AL539_RS05780 0102f6241fb9efa49852ef27e37d47c0 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 11 135 2.4E-48 T 29-03-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AL539_RS05780 0102f6241fb9efa49852ef27e37d47c0 136 Pfam PF03918 Cytochrome C biogenesis protein 27 135 5.7E-41 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL539_RS23920 a17f451e995eab868e39317d4acd5bce 165 Gene3D G3DSA:1.25.40.10 2 165 5.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS05460 27adfc9166193fafe47d7ad030f33b2b 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 3.0E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS05345 27adfc9166193fafe47d7ad030f33b2b 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 3.0E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS21865 7e85fd877be739a00c58d0186b3eaa83 402 SUPERFAMILY SSF55073 231 385 9.42E-40 T 29-03-2018 IPR029787 Nucleotide cyclase AL539_RS21865 7e85fd877be739a00c58d0186b3eaa83 402 Gene3D G3DSA:3.30.70.270 220 393 2.1E-46 T 29-03-2018 AL539_RS21865 7e85fd877be739a00c58d0186b3eaa83 402 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 225 382 2.0E-43 T 29-03-2018 IPR000160 GGDEF domain AL539_RS21865 7e85fd877be739a00c58d0186b3eaa83 402 SMART SM00267 215 384 2.4E-44 T 29-03-2018 IPR000160 GGDEF domain AL539_RS21865 7e85fd877be739a00c58d0186b3eaa83 402 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 379 3.2E-40 T 29-03-2018 IPR000160 GGDEF domain AL539_RS17905 75b22abe015d75a2691a40ec79c8e4bb 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 2.3E-184 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL539_RS17905 75b22abe015d75a2691a40ec79c8e4bb 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 493 1.4E-201 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL539_RS04740 c8bf8c37dcdb42720e400c507d109da9 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 69 2.4E-9 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL539_RS04740 c8bf8c37dcdb42720e400c507d109da9 98 Gene3D G3DSA:3.30.70.100 1 91 1.9E-13 T 29-03-2018 AL539_RS04740 c8bf8c37dcdb42720e400c507d109da9 98 SUPERFAMILY SSF54909 1 71 8.05E-13 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AL539_RS24485 6993ff38d016048b79c13f808b58a514 177 SUPERFAMILY SSF52374 1 172 1.31E-26 T 29-03-2018 AL539_RS24485 6993ff38d016048b79c13f808b58a514 177 Gene3D G3DSA:3.40.50.620 1 177 2.4E-32 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_RS24485 6993ff38d016048b79c13f808b58a514 177 Pfam PF01467 Cytidylyltransferase-like 6 144 4.0E-7 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL539_RS03325 45dc0a2691cdc243a50911b6239c3f41 396 SUPERFAMILY SSF53448 49 326 8.53E-35 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS03325 45dc0a2691cdc243a50911b6239c3f41 396 Pfam PF13641 Glycosyltransferase like family 2 58 278 4.2E-18 T 29-03-2018 AL539_RS03325 45dc0a2691cdc243a50911b6239c3f41 396 Gene3D G3DSA:3.90.550.10 28 311 3.2E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS20590 af5588b01c1bbafc13bb92be05c56ab8 513 Gene3D G3DSA:3.40.390.10 68 382 6.8E-5 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AL539_RS25600 13c94ba3b916e02c3b22ae9e0bbd5786 268 Pfam PF01925 Sulfite exporter TauE/SafE 11 262 1.7E-43 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL539_RS07910 965b640446d8b7b4c11c68f8317eb903 185 PIRSF PIRSF006092 21 185 2.2E-7 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL539_RS07910 965b640446d8b7b4c11c68f8317eb903 185 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 110 184 1.5E-7 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS07910 965b640446d8b7b4c11c68f8317eb903 185 SUPERFAMILY SSF54534 107 184 9.68E-11 T 29-03-2018 AL539_RS07910 965b640446d8b7b4c11c68f8317eb903 185 Gene3D G3DSA:3.10.50.30 100 185 4.3E-15 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL539_RS17460 fb8b86101957654a2953f0d9576fdb28 59 Gene3D G3DSA:2.20.25.10 8 59 3.2E-20 T 29-03-2018 AL539_RS17460 fb8b86101957654a2953f0d9576fdb28 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.759 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AL539_RS17460 fb8b86101957654a2953f0d9576fdb28 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-11 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AL539_RS17460 fb8b86101957654a2953f0d9576fdb28 59 SUPERFAMILY SSF158997 1 54 1.26E-20 T 29-03-2018 AL539_RS22575 24b35c8acb297dd8ed379e4b07f06688 211 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 23 210 3.2E-40 T 29-03-2018 IPR018728 Domain of unknown function DUF2268 AL539_RS22265 3e7858d7eb4c522a1360ae67bec4cff3 109 Pfam PF13642 protein structure with unknown function 8 107 1.4E-32 T 29-03-2018 IPR025284 Protein of unknown function DUF4144 AL539_RS25065 f697fb3b352158a70f6711e405e0763b 113 Pfam PF11137 Protein of unknown function (DUF2909) 42 106 8.0E-22 T 29-03-2018 IPR021313 Protein of unknown function DUF2909 AL539_RS02845 fad8c8e6d26b77f99ef4ad3291678ece 158 Gene3D G3DSA:3.40.190.10 38 158 8.3E-5 T 29-03-2018 AL539_RS02845 fad8c8e6d26b77f99ef4ad3291678ece 158 SUPERFAMILY SSF53850 42 155 1.95E-6 T 29-03-2018 AL539_RS03650 1ce52a5f888fe8dac675fb668ed3e9e4 299 Pfam PF15575 Immunity protein 49 68 283 5.8E-44 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS15500 311b778edaa3e752468ae739cc235643 128 Gene3D G3DSA:1.10.10.10 39 126 1.3E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15500 311b778edaa3e752468ae739cc235643 128 SUPERFAMILY SSF46785 52 106 3.59E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS15535 493dd96a2e1ac8ed953c1aef66eff880 151 Gene3D G3DSA:3.30.420.10 109 151 6.0E-5 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AL539_RS15535 493dd96a2e1ac8ed953c1aef66eff880 151 Pfam PF13276 HTH-like domain 44 94 1.3E-8 T 29-03-2018 IPR025948 HTH-like domain AL539_RS02975 e7c19806b82bd0997adb1bd794dfd590 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 38.982 T 29-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS02975 e7c19806b82bd0997adb1bd794dfd590 128 SUPERFAMILY SSF51182 10 127 7.37E-25 T 29-03-2018 IPR011051 RmlC-like cupin domain AL539_RS02975 e7c19806b82bd0997adb1bd794dfd590 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 9.0E-58 T 29-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS02975 e7c19806b82bd0997adb1bd794dfd590 128 Gene3D G3DSA:2.60.120.10 9 128 4.4E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AL539_RS02975 e7c19806b82bd0997adb1bd794dfd590 128 Pfam PF06339 Ectoine synthase 1 127 1.0E-60 T 29-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL539_RS14950 46e72d11833a1367f21018cfc6075105 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL539_RS14950 46e72d11833a1367f21018cfc6075105 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 1.9E-38 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL539_RS14950 46e72d11833a1367f21018cfc6075105 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.762 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL539_RS14950 46e72d11833a1367f21018cfc6075105 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 2.4E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL539_RS14950 46e72d11833a1367f21018cfc6075105 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 2.4E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL539_RS14950 46e72d11833a1367f21018cfc6075105 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 2.4E-18 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL539_RS14950 46e72d11833a1367f21018cfc6075105 168 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 6.7E-49 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AL539_RS08115 045bfd7e663c6cb6401d8e093dcb4704 324 Pfam PF03595 Voltage-dependent anion channel 19 304 2.6E-31 T 29-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL539_RS09530 a1938f6a6e91a09575e11b0e2b1ef722 32 Pfam PF11665 Protein of unknown function (DUF3265) 2 28 5.1E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS13340 a1abff6c4bff4c72bd5accbed02f74a8 414 Pfam PF01943 Polysaccharide biosynthesis protein 18 280 2.3E-26 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL539_RS12715 e47adda401d9feac6bb074bf78efaeaa 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 25.127 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL539_RS12715 e47adda401d9feac6bb074bf78efaeaa 81 Pfam PF02416 mttA/Hcf106 family 4 55 3.6E-13 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL539_RS12715 e47adda401d9feac6bb074bf78efaeaa 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.2E-21 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL539_RS09115 19408216772e24b3fd2d22c743aee1c9 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 176 4.7E-9 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS09115 19408216772e24b3fd2d22c743aee1c9 192 SUPERFAMILY SSF101327 6 178 9.29E-46 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS09115 19408216772e24b3fd2d22c743aee1c9 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 32.528 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS09115 19408216772e24b3fd2d22c743aee1c9 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 1.1E-35 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AL539_RS05145 43dc313c6e2d6347c9d14d2442095cf1 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 3.5E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS14650 7f45555d895b329b915774717d838bca 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 8.0E-43 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL539_RS24175 ef3f24a04893fa6888857125379cfe6d 282 Pfam PF00924 Mechanosensitive ion channel 57 184 1.3E-15 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL539_RS24175 ef3f24a04893fa6888857125379cfe6d 282 Gene3D G3DSA:2.30.30.60 111 170 1.1E-14 T 29-03-2018 AL539_RS24175 ef3f24a04893fa6888857125379cfe6d 282 SUPERFAMILY SSF50182 96 169 5.23E-10 T 29-03-2018 IPR010920 LSM domain AL539_RS17785 53d349d03604f484b896eac3c76298a8 528 PIRSF PIRSF006446 335 526 2.6E-33 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS17785 53d349d03604f484b896eac3c76298a8 528 PIRSF PIRSF006446 1 329 3.3E-115 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS17785 53d349d03604f484b896eac3c76298a8 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.4E-178 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS18310 e7f850e607e867f0c21752d5ea8badc4 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 278 5.9E-12 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS18310 e7f850e607e867f0c21752d5ea8badc4 287 Gene3D G3DSA:3.60.10.10 11 287 2.8E-24 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS18310 e7f850e607e867f0c21752d5ea8badc4 287 SUPERFAMILY SSF56219 20 285 1.57E-29 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL539_RS25585 0f12fcb9322700854c8aca556dd3ec16 312 SUPERFAMILY SSF53474 177 206 1.51E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25585 0f12fcb9322700854c8aca556dd3ec16 312 SUPERFAMILY SSF53474 3 143 1.51E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25585 0f12fcb9322700854c8aca556dd3ec16 312 SUPERFAMILY SSF53474 233 312 1.51E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25585 0f12fcb9322700854c8aca556dd3ec16 312 Gene3D G3DSA:3.40.50.1820 1 312 1.6E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25585 0f12fcb9322700854c8aca556dd3ec16 312 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 18 156 5.9E-6 T 29-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AL539_RS21245 fa0876060d3a2f70dfd91f52f4fc85f9 177 Pfam PF04170 NlpE N-terminal domain 83 167 9.0E-31 T 29-03-2018 IPR007298 Copper resistance lipoprotein NlpE AL539_RS01340 91cc7653f86b9ea2b67324a85f78ae74 460 Pfam PF08401 Domain of unknown function (DUF1738) 54 96 2.5E-6 T 29-03-2018 IPR013610 Domain of unknown function DUF1738 AL539_RS09055 2d7f31021b5ce6ea50f51f22d12de30d 319 Gene3D G3DSA:2.50.20.10 19 261 4.2E-22 T 29-03-2018 AL539_RS09055 2d7f31021b5ce6ea50f51f22d12de30d 319 Pfam PF03888 MucB/RseB N-terminal domain 26 195 3.9E-57 T 29-03-2018 IPR033434 MucB/RseB, N-terminal AL539_RS09055 2d7f31021b5ce6ea50f51f22d12de30d 319 Pfam PF17188 MucB/RseB C-terminal domain 218 311 1.8E-28 T 29-03-2018 IPR033436 MucB/RseB, C-terminal AL539_RS09055 2d7f31021b5ce6ea50f51f22d12de30d 319 PIRSF PIRSF005427 1 318 2.2E-83 T 29-03-2018 IPR005588 MucB/RseB AL539_RS19565 081a98145a2d863e379eb697a8bd5e7c 144 SUPERFAMILY SSF46458 4 132 2.61E-29 T 29-03-2018 IPR009050 Globin-like AL539_RS19565 081a98145a2d863e379eb697a8bd5e7c 144 Gene3D G3DSA:1.10.490.10 2 136 2.9E-16 T 29-03-2018 AL539_RS05160 9f32e094574fab6a9b097244e929ab25 178 Pfam PF06042 Nucleotidyltransferase 20 176 1.7E-57 T 29-03-2018 IPR009267 Putative nucleotidyltransferase AL539_RS22455 d000cae72110f6408c2e6ae2d8b359da 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 464 6.0E-183 T 29-03-2018 IPR004672 Na+/H+ antiporter NhaD AL539_RS22455 d000cae72110f6408c2e6ae2d8b359da 476 Pfam PF03600 Citrate transporter 45 420 7.6E-54 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL539_RS02135 a9396735bbce5806cc56e555e8336d28 411 Pfam PF00266 Aminotransferase class-V 26 401 6.7E-68 T 29-03-2018 IPR000192 Aminotransferase class V domain AL539_RS02135 a9396735bbce5806cc56e555e8336d28 411 Gene3D G3DSA:3.90.1150.10 270 411 2.0E-33 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AL539_RS02135 a9396735bbce5806cc56e555e8336d28 411 SUPERFAMILY SSF53383 3 410 7.34E-95 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS02135 a9396735bbce5806cc56e555e8336d28 411 Gene3D G3DSA:3.40.640.10 33 269 5.9E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS02135 a9396735bbce5806cc56e555e8336d28 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 8.7E-164 T 29-03-2018 IPR011340 Cysteine desulfurase-related AL539_RS14505 cfe43677167f2eba22694f66a6ba16e7 222 SMART SM00749 125 188 8.9E-4 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL539_RS14505 cfe43677167f2eba22694f66a6ba16e7 222 SMART SM00749 48 111 26.0 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL539_RS14505 cfe43677167f2eba22694f66a6ba16e7 222 Pfam PF04972 BON domain 44 110 2.8E-11 T 29-03-2018 IPR007055 BON domain AL539_RS14505 cfe43677167f2eba22694f66a6ba16e7 222 Pfam PF04972 BON domain 120 185 1.7E-17 T 29-03-2018 IPR007055 BON domain AL539_RS19705 aaea36fb5159572d24c0f2415ab6ca9a 335 PIRSF PIRSF000267 1 335 6.6E-90 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS19705 aaea36fb5159572d24c0f2415ab6ca9a 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.0E-98 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS19705 aaea36fb5159572d24c0f2415ab6ca9a 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 5.4E-44 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL539_RS02915 3788e598b6e1428d16e61f3164bd595d 244 Gene3D G3DSA:1.20.120.330 90 243 6.5E-4 T 29-03-2018 AL539_RS02915 3788e598b6e1428d16e61f3164bd595d 244 Gene3D G3DSA:1.20.120.330 46 89 0.32 T 29-03-2018 AL539_RS22235 84852bad7739f0de376439c45ff25bc2 450 Pfam PF02447 GntP family permease 1 448 5.0E-98 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL539_RS22610 524cb14971afabafb0b7405ae83a4ac1 222 Gene3D G3DSA:1.25.40.10 9 222 4.7E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS18945 a582bfd495609a71be22aa725b80787c 358 SUPERFAMILY SSF53383 25 335 5.16E-73 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL539_RS18945 a582bfd495609a71be22aa725b80787c 358 Pfam PF01212 Beta-eliminating lyase 20 293 3.9E-38 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL539_RS18945 a582bfd495609a71be22aa725b80787c 358 Gene3D G3DSA:3.40.640.10 29 259 2.8E-24 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AL539_RS05210 5af28b0bb3da8fd0f001c4a1bf7739ec 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 1.5E-10 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS09765 c9e6e62f4c11303388e0933c44013edb 447 Pfam PF02378 Phosphotransferase system, EIIC 35 354 7.3E-64 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL539_RS09765 c9e6e62f4c11303388e0933c44013edb 447 PIRSF PIRSF006351 7 435 2.3E-144 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AL539_RS09765 c9e6e62f4c11303388e0933c44013edb 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 427 3.0E-112 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AL539_RS26035 459a3a579052b9fef80e1c0dd26b02cd 454 Pfam PF13379 NMT1-like family 28 308 1.2E-105 T 29-03-2018 AL539_RS26035 459a3a579052b9fef80e1c0dd26b02cd 454 SUPERFAMILY SSF53850 34 334 8.25E-20 T 29-03-2018 AL539_RS26035 459a3a579052b9fef80e1c0dd26b02cd 454 Gene3D G3DSA:3.40.190.10 30 150 6.2E-7 T 29-03-2018 AL539_RS26035 459a3a579052b9fef80e1c0dd26b02cd 454 Gene3D G3DSA:3.40.190.10 157 387 2.3E-36 T 29-03-2018 AL539_RS16010 12e7e96c62f5856c867f2bd875f4b4b5 225 SUPERFAMILY SSF161098 15 210 8.24E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS16010 12e7e96c62f5856c867f2bd875f4b4b5 225 Gene3D G3DSA:1.10.3720.10 13 225 1.4E-39 T 29-03-2018 AL539_RS16010 12e7e96c62f5856c867f2bd875f4b4b5 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 3.6E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS25595 f8386a2fe9b121f4e6089cf7afeff25f 339 SUPERFAMILY SSF53474 27 181 8.12E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25595 f8386a2fe9b121f4e6089cf7afeff25f 339 SUPERFAMILY SSF53474 223 288 8.12E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS25595 f8386a2fe9b121f4e6089cf7afeff25f 339 Gene3D G3DSA:3.40.50.1820 26 317 8.1E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS13195 b2e39e1d5e5c213e8bd835ff7dd3b9f5 304 Gene3D G3DSA:3.40.50.2000 196 282 2.8E-4 T 29-03-2018 AL539_RS13195 b2e39e1d5e5c213e8bd835ff7dd3b9f5 304 Pfam PF05686 Glycosyl transferase family 90 135 283 9.1E-15 T 29-03-2018 IPR006598 Lipopolysaccharide-modifying protein AL539_RS13195 b2e39e1d5e5c213e8bd835ff7dd3b9f5 304 SMART SM00672 35 288 4.8E-4 T 29-03-2018 IPR006598 Lipopolysaccharide-modifying protein AL539_RS01505 6d24a137d6f11d92c4099e3a59aec008 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 4.2E-13 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL539_RS01505 6d24a137d6f11d92c4099e3a59aec008 88 SUPERFAMILY SSF57716 38 71 4.56E-7 T 29-03-2018 AL539_RS22030 93978e2beec482e371503ae7743d4c63 252 Gene3D G3DSA:1.20.5.1000 42 141 1.1E-4 T 29-03-2018 AL539_RS22030 93978e2beec482e371503ae7743d4c63 252 Pfam PF11932 Protein of unknown function (DUF3450) 6 245 3.1E-87 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL539_RS22030 93978e2beec482e371503ae7743d4c63 252 PIRSF PIRSF028069 1 252 6.2E-109 T 29-03-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL539_RS01935 6dabbe1c7d48cf93addd24d586bc8493 171 Gene3D G3DSA:3.40.630.30 1 157 1.1E-24 T 29-03-2018 AL539_RS01935 6dabbe1c7d48cf93addd24d586bc8493 171 Pfam PF00583 Acetyltransferase (GNAT) family 43 143 2.0E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS01935 6dabbe1c7d48cf93addd24d586bc8493 171 SUPERFAMILY SSF55729 1 150 5.74E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS14660 b82483194ad99dec0cb6d606d5ec33be 206 Pfam PF03458 UPF0126 domain 8 81 5.3E-22 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AL539_RS14660 b82483194ad99dec0cb6d606d5ec33be 206 Pfam PF03458 UPF0126 domain 95 166 4.0E-19 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AL539_RS06060 b9eb4119c3a0dd400f00cc9f7216d6f5 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.9E-17 T 29-03-2018 IPR025346 Protein of unknown function DUF4250 AL539_RS02225 ce078094b9185bcd406e2e82c906477d 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 8.7E-100 T 29-03-2018 IPR021974 Protein of unknown function DUF3581 AL539_RS02225 ce078094b9185bcd406e2e82c906477d 241 Gene3D G3DSA:3.10.129.10 8 210 5.2E-5 T 29-03-2018 AL539_RS10085 958fa0e8c143f69079b28949b640d9c0 593 Pfam PF15864 Protein glycosylation ligase 174 199 9.2E-11 T 29-03-2018 IPR031726 Protein glycosylation ligase domain AL539_RS10085 958fa0e8c143f69079b28949b640d9c0 593 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 6.3E-64 T 29-03-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AL539_RS10085 958fa0e8c143f69079b28949b640d9c0 593 Pfam PF04932 O-Antigen ligase 221 368 1.1E-12 T 29-03-2018 IPR007016 O-antigen ligase-related AL539_RS03270 aa328d385c5b68942f63d3987499054b 642 Gene3D G3DSA:3.60.21.10 123 634 1.8E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS03270 aa328d385c5b68942f63d3987499054b 642 Pfam PF09423 PhoD-like phosphatase 314 555 1.7E-6 T 29-03-2018 IPR018946 Alkaline phosphatase D-related AL539_RS03270 aa328d385c5b68942f63d3987499054b 642 SUPERFAMILY SSF56300 150 189 3.48E-12 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS03270 aa328d385c5b68942f63d3987499054b 642 SUPERFAMILY SSF56300 407 552 3.48E-12 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS03270 aa328d385c5b68942f63d3987499054b 642 SUPERFAMILY SSF56300 317 336 3.48E-12 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS16610 fd62dceb5be8cf09e944b34bbb80fa0b 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 1.4E-72 T 29-03-2018 IPR011435 Protein of unknown function DUF1538 AL539_RS20835 f983468f7df699d8f6e1734ddbc8b727 264 Gene3D G3DSA:1.10.3470.10 4 159 1.1E-7 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS20835 f983468f7df699d8f6e1734ddbc8b727 264 SUPERFAMILY SSF81345 40 237 3.27E-9 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS20835 f983468f7df699d8f6e1734ddbc8b727 264 Pfam PF00950 ABC 3 transport family 4 155 3.8E-6 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL539_RS20835 f983468f7df699d8f6e1734ddbc8b727 264 Pfam PF00950 ABC 3 transport family 165 240 6.7E-7 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL539_RS14240 30e936e9f7e7b02f5ee9981e18a2f435 385 Gene3D G3DSA:1.10.10.60 340 384 4.5E-4 T 29-03-2018 AL539_RS05815 2e6579cdcbca18eb5cc94860cf5f4a19 184 Gene3D G3DSA:3.40.190.10 1 155 0.001 T 29-03-2018 AL539_RS13300 01f3baeca4a4dd2a5ab5f026b8fc6f99 184 Gene3D G3DSA:2.40.160.20 23 184 2.7E-13 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS13300 01f3baeca4a4dd2a5ab5f026b8fc6f99 184 Pfam PF13505 Outer membrane protein beta-barrel domain 26 184 7.9E-16 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AL539_RS13300 01f3baeca4a4dd2a5ab5f026b8fc6f99 184 SUPERFAMILY SSF56925 39 184 3.14E-18 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS07925 ce5db0474aa716618e4e945fd0e5f161 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.2E-30 T 29-03-2018 IPR021250 Protein of unknown function DUF2789 AL539_RS23685 dc7ee86f7a14441013ba69ea19c16b40 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 1.1E-58 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AL539_RS23685 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.4E-23 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS23685 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.4E-23 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS23685 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.4E-23 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS23685 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.4E-23 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS23685 dc7ee86f7a14441013ba69ea19c16b40 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 1.0E-60 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL539_RS07120 24cf7ee3d8eba6b789f268d03c8215bd 207 Pfam PF03458 UPF0126 domain 92 163 3.7E-19 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AL539_RS07120 24cf7ee3d8eba6b789f268d03c8215bd 207 Pfam PF03458 UPF0126 domain 5 76 5.5E-19 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AL539_RS09060 3e7c1bfae0b0680a64005b303d94fff8 212 PIRSF PIRSF016938 3 208 6.9E-35 T 29-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 AL539_RS09060 3e7c1bfae0b0680a64005b303d94fff8 212 SUPERFAMILY SSF89069 8 71 3.01E-21 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL539_RS09060 3e7c1bfae0b0680a64005b303d94fff8 212 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 144 195 1.4E-19 T 29-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AL539_RS09060 3e7c1bfae0b0680a64005b303d94fff8 212 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 103 5.8E-35 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL539_RS13360 279002ad2965593b3929fdc8e3358b68 235 Pfam PF00535 Glycosyl transferase family 2 6 164 1.7E-22 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL539_RS13360 279002ad2965593b3929fdc8e3358b68 235 SUPERFAMILY SSF53448 4 209 2.34E-45 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS13360 279002ad2965593b3929fdc8e3358b68 235 Gene3D G3DSA:3.90.550.10 1 232 2.0E-38 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL539_RS08370 b000228c52ea368df1abb4054deb4273 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 7.4E-47 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS08370 b000228c52ea368df1abb4054deb4273 448 Pfam PF01554 MatE 15 176 2.6E-23 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS08370 b000228c52ea368df1abb4054deb4273 448 Pfam PF01554 MatE 240 398 2.3E-12 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS08370 b000228c52ea368df1abb4054deb4273 448 PIRSF PIRSF006603 1 440 4.9E-67 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL539_RS02000 cc09422a286b14f6dc2cc338a2025649 817 Pfam PF02687 FtsX-like permease family 715 809 1.4E-7 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS02000 cc09422a286b14f6dc2cc338a2025649 817 Pfam PF02687 FtsX-like permease family 269 368 8.6E-6 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS16880 76c1351ea7a6cdd84c723b5994f97ad9 233 Gene3D G3DSA:3.30.420.40 106 190 5.5E-26 T 29-03-2018 AL539_RS16880 76c1351ea7a6cdd84c723b5994f97ad9 233 SUPERFAMILY SSF53067 4 106 2.12E-31 T 29-03-2018 AL539_RS16880 76c1351ea7a6cdd84c723b5994f97ad9 233 Pfam PF00814 Glycoprotease family 31 175 1.3E-31 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AL539_RS16880 76c1351ea7a6cdd84c723b5994f97ad9 233 SUPERFAMILY SSF53067 112 219 1.55E-28 T 29-03-2018 AL539_RS16880 76c1351ea7a6cdd84c723b5994f97ad9 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 5.8E-68 T 29-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AL539_RS16880 76c1351ea7a6cdd84c723b5994f97ad9 233 Gene3D G3DSA:3.30.420.40 1 105 5.5E-16 T 29-03-2018 AL539_RS17700 937cab12aea73b567e12e8edf1a63eed 263 SUPERFAMILY SSF53335 7 250 8.28E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS17700 937cab12aea73b567e12e8edf1a63eed 263 Pfam PF08241 Methyltransferase domain 52 148 9.5E-14 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AL539_RS17700 937cab12aea73b567e12e8edf1a63eed 263 Gene3D G3DSA:3.40.50.150 9 263 1.1E-36 T 29-03-2018 AL539_RS17700 937cab12aea73b567e12e8edf1a63eed 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.193 T 29-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AL539_RS20625 34c229261b59daa95c941381d739d511 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 3.1E-62 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AL539_RS11445 8a74a11459a4c71f774729a4efbeda2b 322 PIRSF PIRSF003097 24 318 1.9E-60 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AL539_RS07620 b66a4146f04a974f8c49bffb3b826827 130 Pfam PF07087 Protein of unknown function (DUF1353) 39 115 1.2E-9 T 29-03-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1159 1235 2.5E-27 T 29-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 Pfam PF03527 RHS protein 1132 1166 6.1E-14 T 29-03-2018 IPR001826 RHS protein AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 Pfam PF05593 RHS Repeat 601 637 1.1E-7 T 29-03-2018 IPR031325 RHS repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 Pfam PF05593 RHS Repeat 774 805 1.2E-8 T 29-03-2018 IPR031325 RHS repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 Pfam PF05593 RHS Repeat 560 597 1.0E-7 T 29-03-2018 IPR031325 RHS repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 581 621 1.7E-8 T 29-03-2018 IPR006530 YD repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 774 805 1.9E-6 T 29-03-2018 IPR006530 YD repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 420 457 0.002 T 29-03-2018 IPR006530 YD repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 827 861 0.0029 T 29-03-2018 IPR006530 YD repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 601 641 7.3E-6 T 29-03-2018 IPR006530 YD repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 732 773 5.2E-4 T 29-03-2018 IPR006530 YD repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 690 723 5.9E-5 T 29-03-2018 IPR006530 YD repeat AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 SUPERFAMILY SSF50969 202 399 1.57E-5 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL539_RS00435 133faf5ba357a1d3432df795502055ea 1382 SUPERFAMILY SSF50969 590 616 1.57E-5 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL539_RS22465 0e2ed5a1cfe6b183dc6b6ac70548ccd6 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 188 4.4E-32 T 29-03-2018 IPR003740 Uncharacterised membrane protein YitT AL539_RS03830 e1c24acc737c9fc61df2a58a3de21350 140 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 44 122 2.9E-7 T 29-03-2018 IPR032871 AHH domain-containing protein AL539_RS09280 c41afabde157308cad62f9dc7827a353 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 3.3E-48 T 29-03-2018 IPR025218 Domain of unknown function DUF4426 AL539_RS16645 d49bbdd01381006e187ffb51328938ff 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 2.6E-35 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL539_RS00170 f03ea31c98642e32a295a9abefe42f51 77 Gene3D G3DSA:1.10.10.620 24 68 1.6E-7 T 29-03-2018 AL539_RS03335 390ed25c0711a1090c795343fcaee211 477 Gene3D G3DSA:1.20.120.330 69 296 3.9E-6 T 29-03-2018 AL539_RS03335 390ed25c0711a1090c795343fcaee211 477 Gene3D G3DSA:1.20.5.170 308 405 0.069 T 29-03-2018 AL539_RS07175 5e7851241b1fce46546d1a022b1b4175 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 240 5.0E-86 T 29-03-2018 IPR021806 Protein of unknown function DUF3379 AL539_RS22135 a3a817315f1a57707a6deb4befb6d84a 285 SUPERFAMILY SSF53613 17 278 1.29E-81 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS22135 a3a817315f1a57707a6deb4befb6d84a 285 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 20 277 2.9E-101 T 29-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL539_RS22135 a3a817315f1a57707a6deb4befb6d84a 285 Gene3D G3DSA:3.40.1190.20 1 284 6.9E-62 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS22135 a3a817315f1a57707a6deb4befb6d84a 285 Pfam PF08543 Phosphomethylpyrimidine kinase 27 275 2.4E-94 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL539_RS08655 1132168c07eafd4c7850363626d1fbd0 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 9.4E-114 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL539_RS08655 1132168c07eafd4c7850363626d1fbd0 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 9.6E-108 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL539_RS08655 1132168c07eafd4c7850363626d1fbd0 264 Gene3D G3DSA:3.20.20.60 1 263 7.4E-83 T 29-03-2018 AL539_RS08655 1132168c07eafd4c7850363626d1fbd0 264 PIRSF PIRSF000388 1 264 5.3E-101 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL539_RS08655 1132168c07eafd4c7850363626d1fbd0 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.323 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL539_RS08655 1132168c07eafd4c7850363626d1fbd0 264 SUPERFAMILY SSF51621 3 262 5.5E-106 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AL539_RS25690 20961abe7fb938df6ce6e3adf718f33d 292 SUPERFAMILY SSF103481 183 285 6.02E-15 T 29-03-2018 AL539_RS25690 20961abe7fb938df6ce6e3adf718f33d 292 SUPERFAMILY SSF103481 42 142 5.89E-9 T 29-03-2018 AL539_RS25690 20961abe7fb938df6ce6e3adf718f33d 292 Pfam PF00892 EamA-like transporter family 10 138 1.1E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS25690 20961abe7fb938df6ce6e3adf718f33d 292 Pfam PF00892 EamA-like transporter family 150 279 4.6E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL539_RS22980 7d32f6c2779a2dca0b9c16bc73fadea3 836 Pfam PF02687 FtsX-like permease family 735 825 6.9E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL539_RS22420 95cef5f38575c277a326b23e53d314b8 167 Pfam PF11012 Protein of unknown function (DUF2850) 59 137 7.5E-30 T 29-03-2018 IPR021271 Protein of unknown function DUF2850 AL539_RS20150 2baed7bc29b03195e8db697f14fc3085 826 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 16 816 3.3E-165 T 29-03-2018 IPR005887 Alpha-1,2-mannosidase, putative AL539_RS20150 2baed7bc29b03195e8db697f14fc3085 826 SUPERFAMILY SSF48208 397 795 2.55E-18 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20150 2baed7bc29b03195e8db697f14fc3085 826 SUPERFAMILY SSF48208 312 370 2.55E-18 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AL539_RS20150 2baed7bc29b03195e8db697f14fc3085 826 Gene3D G3DSA:1.20.1050.60 400 496 1.0E-21 T 29-03-2018 AL539_RS20150 2baed7bc29b03195e8db697f14fc3085 826 Gene3D G3DSA:2.70.98.10 35 364 2.9E-85 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL539_RS20150 2baed7bc29b03195e8db697f14fc3085 826 Pfam PF07971 Glycosyl hydrolase family 92 281 815 2.9E-141 T 29-03-2018 IPR012939 Glycosyl hydrolase family 92 AL539_RS20150 2baed7bc29b03195e8db697f14fc3085 826 Gene3D G3DSA:3.30.2080.10 664 826 5.2E-56 T 29-03-2018 AL539_RS25845 b411f9fdd49685da7cb44f636477c348 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 1.2E-16 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS25845 b411f9fdd49685da7cb44f636477c348 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 7.7E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS25845 b411f9fdd49685da7cb44f636477c348 229 SUPERFAMILY SSF161098 10 202 1.44E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS25845 b411f9fdd49685da7cb44f636477c348 229 Gene3D G3DSA:1.10.3720.10 4 221 4.2E-35 T 29-03-2018 AL539_RS17910 a05e637795566987b5b2d857a4219a06 503 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 60 497 5.3E-134 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL539_RS17910 a05e637795566987b5b2d857a4219a06 503 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 497 8.8E-161 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL539_RS12495 0a604acfb7d483b9392b19b3da8aa1ee 325 SUPERFAMILY SSF161098 90 302 1.2E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS12495 0a604acfb7d483b9392b19b3da8aa1ee 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 6.4E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS12495 0a604acfb7d483b9392b19b3da8aa1ee 325 Gene3D G3DSA:1.10.3720.10 3 308 4.5E-39 T 29-03-2018 AL539_RS10840 cf7aef98879a3958ca18ce13d21fbb43 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 4.4E-39 T 29-03-2018 IPR001107 Band 7 domain AL539_RS12825 9bc7631213ece315a8c22b7f94a5579b 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 71 2.4E-12 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AL539_RS06760 ee3d8ceedcbfbe706f5396f82951a296 209 SUPERFAMILY SSF52833 3 184 7.48E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS06760 ee3d8ceedcbfbe706f5396f82951a296 209 Pfam PF13743 Thioredoxin 6 175 5.9E-22 T 29-03-2018 AL539_RS06760 ee3d8ceedcbfbe706f5396f82951a296 209 Gene3D G3DSA:3.40.30.10 1 207 1.1E-34 T 29-03-2018 AL539_RS15955 c2dcc43f656537ee1bef10bee0377cda 207 SUPERFAMILY SSF53474 3 202 2.49E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS15955 c2dcc43f656537ee1bef10bee0377cda 207 Gene3D G3DSA:3.40.50.1820 1 206 8.6E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AL539_RS23650 9f423577e05ba1f4672643327f601019 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 7.2E-23 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS23650 9f423577e05ba1f4672643327f601019 128 Gene3D G3DSA:1.20.120.340 1 128 1.6E-36 T 29-03-2018 AL539_RS23650 9f423577e05ba1f4672643327f601019 128 Pfam PF02561 Flagellar protein FliS 7 122 3.1E-32 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS23650 9f423577e05ba1f4672643327f601019 128 PIRSF PIRSF039090 1 128 8.6E-40 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS23650 9f423577e05ba1f4672643327f601019 128 SUPERFAMILY SSF101116 9 126 2.49E-34 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AL539_RS03670 ce0188e6a55ce93a84c5954f9f150639 176 SUPERFAMILY SSF160631 42 174 1.31E-17 T 29-03-2018 AL539_RS03670 ce0188e6a55ce93a84c5954f9f150639 176 Pfam PF14567 SMI1-KNR4 cell-wall 48 172 2.9E-15 T 29-03-2018 AL539_RS03670 ce0188e6a55ce93a84c5954f9f150639 176 SMART SM00860 51 172 5.1E-5 T 29-03-2018 IPR018958 Knr4/Smi1-like domain AL539_RS03670 ce0188e6a55ce93a84c5954f9f150639 176 Gene3D G3DSA:3.40.1580.10 30 176 1.2E-17 T 29-03-2018 AL539_RS15795 b926563987044900e236042817ad07b7 519 Pfam PF03806 AbgT putative transporter family 19 517 5.5E-210 T 29-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL539_RS19700 85a2989de7cf2834cc7b6f92486c3ffd 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.9E-163 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS19700 85a2989de7cf2834cc7b6f92486c3ffd 454 PIRSF PIRSF006446 2 453 5.7E-215 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL539_RS12320 ee1ebff6eaff168baa8631540d20976c 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 8.4E-20 T 29-03-2018 IPR001727 Gdt1 family AL539_RS12320 ee1ebff6eaff168baa8631540d20976c 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.7E-20 T 29-03-2018 IPR001727 Gdt1 family AL539_RS25530 e9cc59d465b93f77e6cf1d7882b75ee9 226 SUPERFAMILY SSF54637 76 221 7.46E-31 T 29-03-2018 IPR029069 HotDog domain AL539_RS25530 e9cc59d465b93f77e6cf1d7882b75ee9 226 Gene3D G3DSA:3.10.129.10 75 224 2.0E-26 T 29-03-2018 AL539_RS25530 e9cc59d465b93f77e6cf1d7882b75ee9 226 Pfam PF01575 MaoC like domain 83 201 2.4E-22 T 29-03-2018 IPR002539 MaoC-like domain AL539_RS04900 794ab65add69d3985dde1ac821a05ceb 135 SUPERFAMILY SSF51316 5 131 3.56E-34 T 29-03-2018 IPR011057 Mss4-like AL539_RS04900 794ab65add69d3985dde1ac821a05ceb 135 Gene3D G3DSA:3.90.1590.10 3 134 8.8E-29 T 29-03-2018 AL539_RS04900 794ab65add69d3985dde1ac821a05ceb 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 3.2E-13 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL539_RS00060 d8655ff9dfb244153202a97e3f62c6ea 124 Pfam PF04956 TrbC/VIRB2 family 6 99 1.5E-8 T 29-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AL539_RS23255 fdaa97eeebb3418e21a3792571a9f192 204 Gene3D G3DSA:3.40.30.10 19 200 6.3E-19 T 29-03-2018 AL539_RS23255 fdaa97eeebb3418e21a3792571a9f192 204 SUPERFAMILY SSF52833 43 196 1.62E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold AL539_RS23255 fdaa97eeebb3418e21a3792571a9f192 204 Pfam PF02630 SCO1/SenC 21 177 8.3E-30 T 29-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL539_RS09790 063999d59478571ce750ce56b0805bbc 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 7.7E-98 T 29-03-2018 IPR018723 Protein of unknown function DUF2254, membrane AL539_RS11710 593346fdc669b6625386f695c8852a54 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 1.4E-38 T 29-03-2018 IPR022080 Protein of unknown function DUF3630 AL539_RS14285 07a5ffbbe67851fd0d160af41bc1f37a 111 Pfam PF01381 Helix-turn-helix 28 81 1.2E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS14285 07a5ffbbe67851fd0d160af41bc1f37a 111 SMART SM00530 27 82 1.9E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL539_RS14285 07a5ffbbe67851fd0d160af41bc1f37a 111 SUPERFAMILY SSF47413 17 80 3.1E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS14285 07a5ffbbe67851fd0d160af41bc1f37a 111 Gene3D G3DSA:1.10.260.40 10 91 2.4E-12 T 29-03-2018 AL539_RS04680 ce9f99c180ce18194ee9fe8c404e73f4 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 2.2E-15 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AL539_RS18935 c71a0370f5dc8c2818ab3473f8067fd5 164 Pfam PF14317 YcxB-like protein 99 154 2.3E-7 T 29-03-2018 IPR025588 YcxB-like protein AL539_RS02480 7bcf53f0d511be21f09b23c766bbe4bc 510 Gene3D G3DSA:3.40.309.10 270 441 4.8E-21 T 29-03-2018 AL539_RS02480 7bcf53f0d511be21f09b23c766bbe4bc 510 Pfam PF00171 Aldehyde dehydrogenase family 7 453 5.2E-47 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AL539_RS02480 7bcf53f0d511be21f09b23c766bbe4bc 510 SUPERFAMILY SSF53720 7 503 7.59E-100 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AL539_RS02480 7bcf53f0d511be21f09b23c766bbe4bc 510 Gene3D G3DSA:3.40.605.10 1 269 1.5E-48 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AL539_RS14225 0bf9ec97e0a7bb65ddad30c3c6fab5cb 203 Gene3D G3DSA:3.40.630.30 51 180 6.4E-4 T 29-03-2018 AL539_RS05500 f749644ebfddc9e44402b30939b7e911 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 5.6E-15 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS16355 ebbea41f3c3aa6ad46d1340ae914d00a 290 Pfam PF01963 TraB family 26 279 4.7E-50 T 29-03-2018 IPR002816 Pheromone shutdown, TraB AL539_RS12940 249a34545f3435927a43075dfc6275e2 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 248 2.4E-58 T 29-03-2018 IPR022792 Type II secretion system, protein N AL539_RS17220 118437d8f8642c268bec58d49e24c07c 309 Pfam PF03601 Conserved hypothetical protein 698 19 291 2.2E-54 T 29-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AL539_RS03655 11923cef07aeb04ea624ea2b64b9879d 300 Pfam PF15575 Immunity protein 49 68 284 9.8E-41 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS18660 d56a0ee545f690cf080b668e11c8145b 339 Pfam PF03741 Integral membrane protein TerC family 92 293 7.1E-54 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL539_RS18660 d56a0ee545f690cf080b668e11c8145b 339 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 20 325 4.1E-105 T 29-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AL539_RS05170 fb0ba488afed69dcd31fad7196234d30 86 Gene3D G3DSA:1.20.1070.10 1 86 5.5E-4 T 29-03-2018 AL539_RS19295 1a1d5e1df640f9141e25b6555cc9124b 320 Pfam PF01882 Protein of unknown function DUF58 58 143 4.9E-20 T 29-03-2018 IPR002881 Domain of unknown function DUF58 AL539_RS19295 1a1d5e1df640f9141e25b6555cc9124b 320 Gene3D G3DSA:3.40.50.410 70 276 2.1E-18 T 29-03-2018 IPR002035 von Willebrand factor, type A AL539_RS17815 f88f53818d162754c24f2801c0dd6617 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 7.9E-26 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL539_RS00215 0b6b733f8479c23a23787c621ff278e9 239 Pfam PF02754 Cysteine-rich domain 3 84 1.8E-14 T 29-03-2018 IPR004017 Cysteine-rich domain AL539_RS00215 0b6b733f8479c23a23787c621ff278e9 239 Pfam PF02754 Cysteine-rich domain 133 216 1.9E-15 T 29-03-2018 IPR004017 Cysteine-rich domain AL539_RS04845 d9e9974155a7331d313f13aa98249d4d 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-10 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS25850 c77e74ccee1a76afde7801fe53e06fc7 222 SUPERFAMILY SSF161098 9 202 1.83E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS25850 c77e74ccee1a76afde7801fe53e06fc7 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 4.8E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AL539_RS25850 c77e74ccee1a76afde7801fe53e06fc7 222 Gene3D G3DSA:1.10.3720.10 3 220 3.7E-30 T 29-03-2018 AL539_RS25850 c77e74ccee1a76afde7801fe53e06fc7 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 5.4E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AL539_RS19955 9de45347907fe5862caccb934d8b460a 437 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 1.4E-24 T 29-03-2018 IPR010657 ImpA, N-terminal AL539_RS19955 9de45347907fe5862caccb934d8b460a 437 Gene3D G3DSA:3.40.1710.10 158 251 6.0E-4 T 29-03-2018 AL539_RS16735 28b83ff8a6e0169f3cfc5dba2c002799 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.5E-19 T 29-03-2018 IPR021249 Protein of unknown function DUF2788 AL539_RS08825 8b033c9d3cda93529e43a5a04a084a6e 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.001 T 29-03-2018 IPR020143 Uncharacterised protein family, RP436 AL539_RS08825 8b033c9d3cda93529e43a5a04a084a6e 153 Pfam PF09335 SNARE associated Golgi protein 53 146 1.2E-9 T 29-03-2018 IPR032816 SNARE associated Golgi protein AL539_RS23805 0615e78127742a28832974764ae0b426 227 Pfam PF06468 Spondin_N 40 157 3.7E-10 T 29-03-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL539_RS23480 8712a88e0febbd7b6b251f2a0b96bfde 148 Pfam PF06271 RDD family 6 141 1.8E-17 T 29-03-2018 IPR010432 RDD AL539_RS07935 ba7cfad94cdafa5a0160b7b1ec690615 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 29-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL539_RS16365 94eaddd0e2f36f68d19a497d62f1a0df 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 83 180 8.2E-6 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin AL539_RS01560 db34cc81a284d3b62aeed65a85e420cd 272 Pfam PF07103 Protein of unknown function (DUF1365) 9 245 4.3E-69 T 29-03-2018 IPR010775 Protein of unknown function DUF1365 AL539_RS02430 be9d5fb2ee13508443e4b7502a91d563 190 Pfam PF07209 Protein of unknown function (DUF1415) 14 182 5.5E-66 T 29-03-2018 IPR009858 Protein of unknown function DUF1415 AL539_RS11530 e83d0397dcd100f6b8819b91cfeb9678 205 PIRSF PIRSF006324 1 205 9.5E-57 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS11530 e83d0397dcd100f6b8819b91cfeb9678 205 Pfam PF01810 LysE type translocator 15 202 1.8E-34 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS05095 90d002117c03749ffbc2815ec5213c9e 106 Pfam PF13711 Domain of unknown function (DUF4160) 9 79 8.6E-14 T 29-03-2018 IPR025427 Protein of unknown function DUF4160 AL539_RS14960 1ad948d7456955718ff868cfdfc8013f 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 6.3E-98 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL539_RS14960 1ad948d7456955718ff868cfdfc8013f 317 Pfam PF02401 LytB protein 3 284 8.9E-92 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL539_RS14960 1ad948d7456955718ff868cfdfc8013f 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.023 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL539_RS00750 64cb1a0178089a0ac3bcd532aecfba81 313 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 33 300 2.8E-32 T 29-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AL539_RS00285 a0a75b00c88fe5dd24ac974f3a3763ee 91 Gene3D G3DSA:2.30.130.30 1 71 5.2E-4 T 29-03-2018 AL539_RS03750 58815446e8230dca876bd5cf3fa646a2 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 137 273 7.9E-17 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL539_RS03750 58815446e8230dca876bd5cf3fa646a2 278 Gene3D G3DSA:1.10.530.10 65 278 7.3E-26 T 29-03-2018 AL539_RS23515 9a42580f391766d0981277f7dacef208 725 Pfam PF04632 Fusaric acid resistance protein family 6 525 1.1E-43 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AL539_RS13345 6a30e4691dc511af3f7e08eb19a151b5 382 SUPERFAMILY SSF53756 143 309 3.35E-10 T 29-03-2018 AL539_RS13345 6a30e4691dc511af3f7e08eb19a151b5 382 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 14 344 5.8E-52 T 29-03-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AL539_RS10005 6eb9a1109f0ee43da07706c469d36c10 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 5.1E-65 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS10005 6eb9a1109f0ee43da07706c469d36c10 481 Gene3D G3DSA:3.30.2290.10 16 240 1.0E-55 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AL539_RS10005 6eb9a1109f0ee43da07706c469d36c10 481 PIRSF PIRSF004919 14 481 1.1E-142 T 29-03-2018 IPR025502 TldD AL539_RS10005 6eb9a1109f0ee43da07706c469d36c10 481 SUPERFAMILY SSF111283 18 480 6.02E-129 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL539_RS03950 2fb54eaa5ad7966e61e520d1aeed3196 882 Pfam PF02470 MlaD protein 163 222 3.4E-6 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS03950 2fb54eaa5ad7966e61e520d1aeed3196 882 Pfam PF02470 MlaD protein 298 356 3.4E-6 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS03950 2fb54eaa5ad7966e61e520d1aeed3196 882 Pfam PF02470 MlaD protein 753 811 1.1E-6 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS03950 2fb54eaa5ad7966e61e520d1aeed3196 882 Pfam PF02470 MlaD protein 398 463 5.0E-6 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS03950 2fb54eaa5ad7966e61e520d1aeed3196 882 Pfam PF02470 MlaD protein 47 138 1.7E-12 T 29-03-2018 IPR003399 Mce/MlaD AL539_RS12630 bc5bd8b151794560f538706b41d950f4 183 Pfam PF04972 BON domain 115 182 2.3E-15 T 29-03-2018 IPR007055 BON domain AL539_RS12630 bc5bd8b151794560f538706b41d950f4 183 Pfam PF04972 BON domain 33 99 2.4E-17 T 29-03-2018 IPR007055 BON domain AL539_RS12630 bc5bd8b151794560f538706b41d950f4 183 SMART SM00749 120 183 5.3E-5 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL539_RS12630 bc5bd8b151794560f538706b41d950f4 183 SMART SM00749 37 100 36.0 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL539_RS11575 66079862e0402680cd8958ab226f388e 234 Gene3D G3DSA:3.30.450.40 43 218 7.1E-8 T 29-03-2018 IPR029016 GAF domain-like AL539_RS11575 66079862e0402680cd8958ab226f388e 234 Pfam PF04340 Protein of unknown function, DUF484 6 216 1.8E-68 T 29-03-2018 IPR007435 Protein of unknown function DUF484 AL539_RS19935 8b19a86d49b1e43c3251891cf9e4bb96 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 1.6E-137 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AL539_RS19935 8b19a86d49b1e43c3251891cf9e4bb96 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 2.8E-152 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AL539_RS23125 535f344584ddf97cdecf9492de2d1de4 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 152 1.6E-26 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL539_RS14335 25e6a45aa86c807cf87f877eb2b7162d 160 SUPERFAMILY SSF55083 1 148 5.75E-38 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS14335 25e6a45aa86c807cf87f877eb2b7162d 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 3.7E-25 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS14335 25e6a45aa86c807cf87f877eb2b7162d 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 1.9E-29 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS14335 25e6a45aa86c807cf87f877eb2b7162d 160 Gene3D G3DSA:3.30.70.560 1 156 2.0E-37 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL539_RS24345 d5069d2fe167d7705256be8cb97e0463 415 Pfam PF04932 O-Antigen ligase 185 342 1.8E-11 T 29-03-2018 IPR007016 O-antigen ligase-related AL539_RS21555 58b5a65d8c399ca6341edffdacea488c 119 Pfam PF11777 Protein of unknown function (DUF3316) 9 112 1.3E-11 T 29-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL539_RS21555 58b5a65d8c399ca6341edffdacea488c 119 PIRSF PIRSF028299 1 118 8.0E-22 T 29-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL539_RS11960 2a7a6626c70206702f1389b47ba32825 87 Gene3D G3DSA:3.30.160.140 5 85 4.6E-29 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 AL539_RS11960 2a7a6626c70206702f1389b47ba32825 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 3.7E-25 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 AL539_RS11960 2a7a6626c70206702f1389b47ba32825 87 SUPERFAMILY SSF160272 1 86 4.18E-29 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 AL539_RS22970 ee9e5e8e83ea6e862dea54c70b87b81b 88 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 4.7E-46 T 29-03-2018 IPR021376 Protein of unknown function DUF2999 AL539_RS04810 1c76a131f0bbae563af096faf00b4146 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 1.2E-10 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS24900 4b40cead14eaa10c8c36b187dfa0b993 128 Pfam PF03928 Haem-degrading 5 124 6.2E-25 T 29-03-2018 IPR005624 Haem-degrading AL539_RS24900 4b40cead14eaa10c8c36b187dfa0b993 128 SUPERFAMILY SSF143744 6 127 3.01E-29 T 29-03-2018 AL539_RS15580 8d2d375fc4b586f1168e30797245db0f 231 Gene3D G3DSA:3.40.630.30 57 182 0.0011 T 29-03-2018 AL539_RS00290 4a393095ab9d9be9cde76f6ffda7d56b 90 Pfam PF09904 Winged helix-turn helix 5 81 5.7E-9 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL539_RS00290 4a393095ab9d9be9cde76f6ffda7d56b 90 Gene3D G3DSA:1.10.10.10 1 71 4.1E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS14795 f70da3195e2190b90a3cadb9ec8ea1c4 189 Pfam PF01814 Hemerythrin HHE cation binding domain 8 141 6.3E-14 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL539_RS14795 f70da3195e2190b90a3cadb9ec8ea1c4 189 Gene3D G3DSA:1.20.120.520 3 160 2.3E-15 T 29-03-2018 AL539_RS18755 0818f2867b61799351b86441064054e6 434 Gene3D G3DSA:3.40.1190.20 32 431 5.9E-44 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS18755 0818f2867b61799351b86441064054e6 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 3.1E-12 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AL539_RS18755 0818f2867b61799351b86441064054e6 434 SUPERFAMILY SSF53613 338 417 1.57E-45 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS18755 0818f2867b61799351b86441064054e6 434 SUPERFAMILY SSF53613 34 305 1.57E-45 T 29-03-2018 IPR029056 Ribokinase-like AL539_RS04640 aef319952b977312fd5ae97da21dffd2 388 Pfam PF12698 ABC-2 family transporter protein 15 369 5.0E-42 T 29-03-2018 AL539_RS04640 aef319952b977312fd5ae97da21dffd2 388 Gene3D G3DSA:3.40.1710.10 41 196 2.5E-27 T 29-03-2018 AL539_RS07485 f20e5b044bc58b8c3be8efb1d98fd91b 117 Pfam PF11169 Protein of unknown function (DUF2956) 12 113 3.6E-43 T 29-03-2018 IPR021339 Protein of unknown function DUF2956 AL539_RS12080 1c43ec4bf32101dd540b8a829f6070b7 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 316 3.8E-113 T 29-03-2018 IPR016896 Protein of unknown function DUF2860 AL539_RS12080 1c43ec4bf32101dd540b8a829f6070b7 318 Gene3D G3DSA:2.40.160.10 59 318 1.5E-6 T 29-03-2018 AL539_RS12080 1c43ec4bf32101dd540b8a829f6070b7 318 PIRSF PIRSF028696 1 318 1.4E-125 T 29-03-2018 IPR016896 Protein of unknown function DUF2860 AL539_RS03790 7f97893c009ae5fc6662df2bb3585471 158 Pfam PF05751 FixH 7 147 1.6E-41 T 29-03-2018 IPR008620 Nitrogen fixation protein FixH AL539_RS22020 658564062a552ecbb676a33b7cecdda2 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 177 1.8E-22 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS04835 7e26e224c4a5df5b0f07e2eeec6bfcec 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 1.3E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS06925 a8473d1cd12a8c3ded4abad8564b482e 275 PIRSF PIRSF018249 1 273 5.5E-86 T 29-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AL539_RS06925 a8473d1cd12a8c3ded4abad8564b482e 275 SUPERFAMILY SSF53335 4 258 7.32E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS06925 a8473d1cd12a8c3ded4abad8564b482e 275 Gene3D G3DSA:3.40.50.150 1 273 3.3E-51 T 29-03-2018 AL539_RS06925 a8473d1cd12a8c3ded4abad8564b482e 275 Pfam PF13847 Methyltransferase domain 85 220 1.2E-14 T 29-03-2018 IPR025714 Methyltransferase domain AL539_RS05175 411a1d9610fe224253e3dfcbd0c0d5a4 176 Gene3D G3DSA:1.10.530.10 44 173 8.6E-11 T 29-03-2018 AL539_RS05175 411a1d9610fe224253e3dfcbd0c0d5a4 176 SUPERFAMILY SSF53955 46 156 4.31E-10 T 29-03-2018 IPR023346 Lysozyme-like domain AL539_RS10300 81e8d9ce293b7e9c0c56755fe9b409b0 191 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 7.3E-11 T 29-03-2018 IPR007813 Fimbrial assembly PilN AL539_RS03910 099d0dfc0e6fffa0f266d79e866f4017 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 6.5E-29 T 29-03-2018 IPR021363 Protein of unknown function DUF2835 AL539_RS03405 ee2c535431bb0bed0fd5169826787c1a 332 Pfam PF11279 Protein of unknown function (DUF3080) 26 329 1.8E-83 T 29-03-2018 IPR021431 Protein of unknown function DUF3080 AL539_RS05025 e10d3547ea4f485a2041ff66cf84da99 37 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 2.9E-12 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS20890 07820417ce8771c406e4de5f534c1aae 108 Pfam PF13698 Domain of unknown function (DUF4156) 22 106 1.8E-22 T 29-03-2018 IPR025294 Protein of unknown function DUF4156 AL539_RS23465 15f6bbada146bb22c257064fc1add59c 72 Gene3D G3DSA:1.10.720.30 14 70 8.5E-32 T 29-03-2018 IPR003034 SAP domain AL539_RS23465 15f6bbada146bb22c257064fc1add59c 72 Pfam PF09905 DNA-binding protein VF530 6 68 6.4E-35 T 29-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AL539_RS00305 cfeff2d4306135b29f02497465aa0229 258 Pfam PF01863 Protein of unknown function DUF45 38 249 7.1E-57 T 29-03-2018 IPR002725 Protein of unknown function DUF45 AL539_RS19050 c90757e763cbbcef579ceea224d5c488 129 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 1.9E-19 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL539_RS19050 c90757e763cbbcef579ceea224d5c488 129 Gene3D G3DSA:1.10.287.1080 1 128 1.5E-15 T 29-03-2018 AL539_RS19050 c90757e763cbbcef579ceea224d5c488 129 SUPERFAMILY SSF101386 2 103 3.18E-16 T 29-03-2018 AL539_RS15935 31b7547f0521d00136fbf980265572e2 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 6.4E-22 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS15935 31b7547f0521d00136fbf980265572e2 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site AL539_RS07660 dc5a033a297ee8a24dadca84355aeff1 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 2.7E-40 T 29-03-2018 IPR009698 Protein of unknown function DUF1282 AL539_RS23890 9c7eb89484ef85426eb8ece14d663999 115 SUPERFAMILY SSF47413 8 87 1.04E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AL539_RS23890 9c7eb89484ef85426eb8ece14d663999 115 Gene3D G3DSA:1.10.260.40 10 82 1.2E-6 T 29-03-2018 AL539_RS07380 d3342748c54a818826b25ab1757a60c2 617 Pfam PF02120 Flagellar hook-length control protein FliK 488 571 1.5E-25 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL539_RS18270 6e29b4a9adeb9f322a3923c4974b5d1e 158 Pfam PF10517 Electron transfer DM13 63 157 9.4E-18 T 29-03-2018 IPR019545 DM13 domain AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 Pfam PF02119 Flagellar P-ring protein 36 377 2.3E-135 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 Hamap MF_00416 Flagellar P-ring protein [flgI]. 13 378 36.821 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 69 84 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 117 134 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 50 65 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 201 219 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 175 193 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 35 50 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 265 277 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 95 114 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS21440 c1683e87ef1447050d6654440ad6ba12 378 PRINTS PR01010 Flagellar P-ring protein signature 134 152 8.1E-77 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL539_RS19540 ff65e5b79629c7cf1eb18abca477aaff 155 Pfam PF02566 OsmC-like protein 55 150 4.7E-16 T 29-03-2018 IPR003718 OsmC/Ohr family AL539_RS19540 ff65e5b79629c7cf1eb18abca477aaff 155 SUPERFAMILY SSF82784 1 150 2.36E-48 T 29-03-2018 IPR003718 OsmC/Ohr family AL539_RS19540 ff65e5b79629c7cf1eb18abca477aaff 155 Gene3D G3DSA:3.30.300.20 1 153 2.4E-33 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AL539_RS18500 a89aa34f666d72a6a06ec1c89d36b2cd 189 SUPERFAMILY SSF110997 99 162 5.89E-8 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS18500 a89aa34f666d72a6a06ec1c89d36b2cd 189 Pfam PF05036 Sporulation related domain 99 171 1.5E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS18500 a89aa34f666d72a6a06ec1c89d36b2cd 189 Gene3D G3DSA:3.30.70.1070 99 171 2.1E-7 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS07855 e03b23710a7977133e446d3cfbd1cee4 528 Pfam PF03806 AbgT putative transporter family 19 526 1.5E-225 T 29-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL539_RS06100 64022694fc958ca35d00c2cd4657b92f 468 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 29 241 1.2E-17 T 29-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AL539_RS24220 5ce85775ba1d97a7ce648d9cb022c52d 454 Pfam PF02386 Cation transport protein 50 437 3.7E-56 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL539_RS24220 5ce85775ba1d97a7ce648d9cb022c52d 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 426 1.3E-106 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AL539_RS17315 6235e4f7a47dbe1684318741e50eba59 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 136 2.7E-43 T 29-03-2018 AL539_RS19530 20cd63868416fba33408ba73da2f51f4 336 Pfam PF10974 Protein of unknown function (DUF2804) 40 335 3.2E-82 T 29-03-2018 IPR021243 Protein of unknown function DUF2804 AL539_RS23315 db4918f861102f08edf7ea18b3b4e571 155 Pfam PF07670 Nucleoside recognition 31 124 9.3E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL539_RS25360 9541d37e43d6e47a5e854e122f1fcc3c 110 Gene3D G3DSA:2.40.50.140 5 108 0.0017 T 29-03-2018 AL539_RS16385 bf8f2011ce998c9123f90e957d17cbbe 373 Pfam PF13609 Gram-negative porin 10 342 1.2E-34 T 29-03-2018 AL539_RS16385 bf8f2011ce998c9123f90e957d17cbbe 373 Gene3D G3DSA:2.40.160.10 13 373 1.3E-37 T 29-03-2018 AL539_RS16385 bf8f2011ce998c9123f90e957d17cbbe 373 SUPERFAMILY SSF56935 44 373 6.41E-41 T 29-03-2018 AL539_RS04975 131e316b3e6ee88ef047183da1d47cbc 42 Pfam PF11665 Protein of unknown function (DUF3265) 19 37 1.6E-6 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS02840 29d170a13c153da1f595612c6485772c 363 Gene3D G3DSA:2.40.160.10 8 363 2.4E-28 T 29-03-2018 AL539_RS02840 29d170a13c153da1f595612c6485772c 363 SUPERFAMILY SSF56935 26 363 3.66E-23 T 29-03-2018 AL539_RS25015 db1817d545295358d742f008fa3a7ae6 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 6.3E-24 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AL539_RS23050 e9540f5c4daf612fd19dbe0fe0c3d0e1 323 SUPERFAMILY SSF81345 5 319 3.27E-80 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AL539_RS23050 e9540f5c4daf612fd19dbe0fe0c3d0e1 323 Gene3D G3DSA:1.10.3470.10 2 322 2.1E-68 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AL539_RS23050 e9540f5c4daf612fd19dbe0fe0c3d0e1 323 Pfam PF01032 FecCD transport family 13 319 5.2E-93 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AL539_RS21360 e9b779e7ecfda71adcec3ecebd74ba0b 123 Gene3D G3DSA:3.10.180.10 7 120 2.1E-15 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS21360 e9b779e7ecfda71adcec3ecebd74ba0b 123 SUPERFAMILY SSF54593 12 120 2.34E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_RS21360 e9b779e7ecfda71adcec3ecebd74ba0b 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 1.2E-5 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_RS09385 a9dfb48eaf8758e43c51c2c1d3c871f1 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 6.7E-15 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS25315 85fa8908191f8b0f771345e84536e967 423 Gene3D G3DSA:1.20.5.1230 123 422 7.0E-5 T 29-03-2018 AL539_RS22555 61f43b4b422186ea3e3590d8a17d101a 264 Pfam PF14247 Putative metallopeptidase 28 250 4.7E-65 T 29-03-2018 IPR025644 Putative metallopeptidase AL539_RS24075 00b425955bf9e537781c2947f125aee4 191 Pfam PF07603 Protein of unknown function (DUF1566) 42 175 7.3E-21 T 29-03-2018 IPR011460 Protein of unknown function DUF1566 AL539_RS07795 26f9d7b56232466f78736086617f99bb 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 339 4.1E-135 T 29-03-2018 IPR021936 Protein of unknown function DUF3549 AL539_RS07985 a9b586f466a5c431f70a449c81eca271 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.3E-52 T 29-03-2018 IPR005619 Uncharacterised protein family, YajG AL539_RS10915 6a16d2265382a15b520094722e5fb665 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 9.3E-35 T 29-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AL539_RS11615 a3914c18d1c640e5909ea14823da3634 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 2.4E-107 T 29-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AL539_RS04275 06e3ab3d0d048ade9f93dc0716bc409b 159 SUPERFAMILY SSF55729 5 148 2.13E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AL539_RS04275 06e3ab3d0d048ade9f93dc0716bc409b 159 Pfam PF00583 Acetyltransferase (GNAT) family 27 146 8.1E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AL539_RS04275 06e3ab3d0d048ade9f93dc0716bc409b 159 Gene3D G3DSA:3.40.630.30 1 153 1.5E-26 T 29-03-2018 AL539_RS14895 9a962b43068d4ef1df64f16d56296b19 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.4E-50 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL539_RS19750 6a06937897b85910e5cef05d4959a12c 96 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 7 90 1.3E-4 T 29-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AL539_RS19750 6a06937897b85910e5cef05d4959a12c 96 SUPERFAMILY SSF53335 8 94 6.09E-10 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL539_RS22000 b9b9d74b7ac4ed71af909c4ad3b8175f 209 Pfam PF16357 Putative PepSY_TM-like 10 209 3.9E-63 T 29-03-2018 IPR032307 Putative PepSY TM-like protein AL539_RS18990 8578c8f7d2d7ec4d6d8c7384aa99842b 170 Pfam PF11158 Protein of unknown function (DUF2938) 14 160 4.2E-57 T 29-03-2018 IPR021329 Protein of unknown function DUF2938 AL539_RS07495 e619fc343b0766229bf9084ab129c07d 95 Pfam PF09904 Winged helix-turn helix 4 91 8.2E-38 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL539_RS07495 e619fc343b0766229bf9084ab129c07d 95 PIRSF PIRSF037266 1 94 4.1E-41 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL539_RS23505 2b3d3b8cac326875eaf34914a1899908 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 4.1E-16 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AL539_RS00770 4c9e8c5c83d202cb165d553c16903745 199 Gene3D G3DSA:3.40.50.300 2 198 6.4E-19 T 29-03-2018 AL539_RS00770 4c9e8c5c83d202cb165d553c16903745 199 SUPERFAMILY SSF52540 4 181 2.53E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_RS00770 4c9e8c5c83d202cb165d553c16903745 199 Pfam PF01926 50S ribosome-binding GTPase 5 120 7.6E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AL539_RS01705 947c33ffc311fc86b04a77029fd19382 148 Pfam PF05232 Chlorhexidine efflux transporter 1 63 4.1E-22 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter AL539_RS01705 947c33ffc311fc86b04a77029fd19382 148 Pfam PF05232 Chlorhexidine efflux transporter 69 131 9.5E-22 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter AL539_RS11705 dbff0671cc28dd3ebf21e4750a62444d 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 9.9E-63 T 29-03-2018 IPR003744 Queuosine precursor transporter AL539_RS11705 dbff0671cc28dd3ebf21e4750a62444d 224 Pfam PF02592 Putative vitamin uptake transporter 43 199 6.7E-38 T 29-03-2018 IPR003744 Queuosine precursor transporter AL539_RS17475 0259203eccf9f8f5ada053cb0f69346c 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 5.2E-188 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 AL539_RS17475 0259203eccf9f8f5ada053cb0f69346c 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.667 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 AL539_RS07800 6a09d4ea65a72b4f029d5d902ed542da 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 2.6E-30 T 29-03-2018 IPR021732 Protein of unknown function DUF3301 AL539_RS07800 6a09d4ea65a72b4f029d5d902ed542da 99 Gene3D G3DSA:1.20.5.900 1 38 2.9E-4 T 29-03-2018 AL539_RS10760 b01b29978bea5d096d3e25b6d3c6455b 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 468 1.2E-81 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL539_RS10760 b01b29978bea5d096d3e25b6d3c6455b 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 465 1.8E-48 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL539_RS12615 c10f1b65661b001469043030694d73a3 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 3.3E-51 T 29-03-2018 IPR019598 Universal stress protein B AL539_RS12615 c10f1b65661b001469043030694d73a3 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.113 T 29-03-2018 IPR019598 Universal stress protein B AL539_RS19070 6ab7b0340f67a824a1dfb139f45090d0 91 Pfam PF03206 Nitrogen fixation protein NifW 7 72 2.0E-5 T 29-03-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 AL539_RS21785 56fa4fb08baf7818649c7253bc98d1d8 362 Pfam PF12060 Domain of unknown function (DUF3541) 32 253 5.6E-109 T 29-03-2018 IPR021928 Protein of unknown function DUF3541 AL539_RS09835 ee7f2f0b69d89af6fa1a8b53fa7e71aa 266 Gene3D G3DSA:2.60.120.260 1 184 3.8E-10 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS09835 ee7f2f0b69d89af6fa1a8b53fa7e71aa 266 SUPERFAMILY SSF49785 2 156 2.72E-17 T 29-03-2018 IPR008979 Galactose-binding domain-like AL539_RS01570 1f5ef5dd43593cd5eef2c16f3ceb9de0 170 Pfam PF11086 Protein of unknown function (DUF2878) 5 151 6.4E-31 T 29-03-2018 IPR021306 Protein of unknown function DUF2878 AL539_RS20770 7e9fb4bf2a3998dbbffb0c3a47d49eab 135 Pfam PF05036 Sporulation related domain 44 118 7.5E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS20770 7e9fb4bf2a3998dbbffb0c3a47d49eab 135 SUPERFAMILY SSF110997 44 109 1.44E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AL539_RS24545 94e51de42d9043db1fc28ce84c250e8c 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 4.2E-22 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AL539_RS16420 1a4d857fa8561ee85e407ab2711e57c7 212 PIRSF PIRSF028688 1 212 3.2E-118 T 29-03-2018 IPR014549 Flagellar protein FlgO AL539_RS16420 1a4d857fa8561ee85e407ab2711e57c7 212 Gene3D G3DSA:3.40.50.10070 56 187 2.9E-10 T 29-03-2018 AL539_RS05545 abce429114588cca86981ec1b358f585 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.6E-72 T 29-03-2018 IPR021334 Protein of unknown function DUF2947 AL539_RS07570 435a414693638728a2e12d19278e47b9 402 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 1.6E-69 T 29-03-2018 IPR018642 Protein of unknown function DUF2066 AL539_RS07510 ddf5dd1cc874ea1ccdc9597ad8836fbf 232 Gene3D G3DSA:3.30.1380.10 9 182 1.7E-31 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL539_RS07510 ddf5dd1cc874ea1ccdc9597ad8836fbf 232 SUPERFAMILY SSF55166 20 175 6.8E-21 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL539_RS07510 ddf5dd1cc874ea1ccdc9597ad8836fbf 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 178 7.3E-37 T 29-03-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AL539_RS13745 a589c3de5ffbae89bc608cdcada9e1b9 99 Pfam PF10795 Protein of unknown function (DUF2607) 4 97 2.3E-23 T 29-03-2018 IPR019731 Protein of unknown function DUF2607 AL539_RS08250 00627b4df94ef786c02a47cac40b36bd 69 Pfam PF06568 Domain of unknown function (DUF1127) 24 55 7.5E-10 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 AL539_RS01320 756a9bb9d7f6f33e6eda77f121920617 232 SUPERFAMILY SSF141571 53 137 1.44E-18 T 29-03-2018 AL539_RS01320 756a9bb9d7f6f33e6eda77f121920617 232 Gene3D G3DSA:2.160.20.80 41 165 2.4E-17 T 29-03-2018 AL539_RS01320 756a9bb9d7f6f33e6eda77f121920617 232 Pfam PF13599 Pentapeptide repeats (9 copies) 82 136 4.8E-9 T 29-03-2018 IPR001646 Pentapeptide repeat AL539_RS25030 6c2648f1f1ceaf4544459c656bd5afbe 210 Pfam PF01810 LysE type translocator 16 205 2.1E-27 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS25030 6c2648f1f1ceaf4544459c656bd5afbe 210 PIRSF PIRSF006324 1 209 1.7E-57 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS17795 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 29-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AL539_RS17795 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 29-03-2018 IPR012994 Membrane bound YbgT-like AL539_RS08010 b1e8c495c704455179731c2734644850 452 Pfam PF14344 Domain of unknown function (DUF4397) 247 369 1.2E-17 T 29-03-2018 IPR025510 Domain of unknown function DUF4397 AL539_RS08010 b1e8c495c704455179731c2734644850 452 Pfam PF14344 Domain of unknown function (DUF4397) 31 153 6.2E-17 T 29-03-2018 IPR025510 Domain of unknown function DUF4397 AL539_RS08010 b1e8c495c704455179731c2734644850 452 Pfam PF14344 Domain of unknown function (DUF4397) 138 227 3.4E-12 T 29-03-2018 IPR025510 Domain of unknown function DUF4397 AL539_RS12180 d479ef4bbd615133259554a2a6386701 129 Pfam PF03899 ATP synthase I chain 15 111 7.8E-21 T 29-03-2018 IPR005598 ATP synthase protein I AL539_RS21560 757a57db964494bd6d2904af7684d162 310 Pfam PF04393 Protein of unknown function (DUF535) 29 297 1.0E-80 T 29-03-2018 IPR007488 Protein of unknown function DUF535 AL539_RS10110 8cd2925402722a62300f145e4a08048f 443 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 6.8E-55 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL539_RS17985 987c28df5316b1840c7beb4632648dea 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 3.1E-137 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL539_RS19385 a472549b8450fecd4fe1db0310c522ba 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 7.0E-33 T 29-03-2018 IPR020137 Uncharacterised protein family HI1736 AL539_RS19385 a472549b8450fecd4fe1db0310c522ba 83 Pfam PF10688 Bacterial inner membrane protein 4 73 1.9E-9 T 29-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL539_RS20050 641256e6e16edb2ab71e42a27a4dbdf2 411 Gene3D G3DSA:2.130.10.150 105 401 2.9E-9 T 29-03-2018 AL539_RS20050 641256e6e16edb2ab71e42a27a4dbdf2 411 SUPERFAMILY SSF69304 134 319 6.41E-11 T 29-03-2018 AL539_RS03280 7abdf245b3e43a52dbc6bf0ba27fc9a2 434 Gene3D G3DSA:2.40.160.20 9 255 4.4E-5 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS03280 7abdf245b3e43a52dbc6bf0ba27fc9a2 434 Pfam PF06629 MltA-interacting protein MipA 41 237 2.4E-23 T 29-03-2018 IPR010583 MltA-interacting MipA AL539_RS25365 a7875b799a39b6a687a4c47332c77d41 130 SUPERFAMILY SSF117782 24 128 3.92E-25 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL539_RS25365 a7875b799a39b6a687a4c47332c77d41 130 Gene3D G3DSA:3.30.110.70 23 127 1.4E-26 T 29-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 AL539_RS25365 a7875b799a39b6a687a4c47332c77d41 130 Pfam PF01906 Putative heavy-metal-binding 24 127 2.1E-23 T 29-03-2018 IPR002765 Uncharacterised protein family UPF0145 AL539_RS13280 524ed9d506cdeb14d2883d530dfb7676 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 717 6.6E-255 T 29-03-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH AL539_RS17895 a97238f8a962c08af24d11837da36a46 371 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 142 2.8E-32 T 29-03-2018 IPR010657 ImpA, N-terminal AL539_RS17895 a97238f8a962c08af24d11837da36a46 371 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 10 364 8.3E-80 T 29-03-2018 IPR017740 Type VI secretion system-associated, ImpA AL539_RS11760 90907fc42461789bb70831b4ccf1e626 252 Pfam PF09836 Putative DNA-binding domain 6 94 2.0E-22 T 29-03-2018 IPR018640 Putative DNA-binding domain, bacteria AL539_RS17420 8018e04ffe40046ea3630e731b4407a3 189 Gene3D G3DSA:2.40.10.220 5 177 2.6E-5 T 29-03-2018 AL539_RS03075 bf4d73c4f3c0f0fd24c0ab845fe7cc31 185 Pfam PF12570 Protein of unknown function (DUF3750) 50 182 6.0E-49 T 29-03-2018 IPR022224 Protein of unknown function DUF3750 AL539_RS23490 ba53de768e53e222993ba894cce8061a 382 Pfam PF01594 AI-2E family transporter 24 347 2.7E-32 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AL539_RS02735 1d3b91a28be376e1f5388c1cf8556ef9 134 SUPERFAMILY SSF159888 7 126 4.19E-10 T 29-03-2018 AL539_RS02735 1d3b91a28be376e1f5388c1cf8556ef9 134 Pfam PF08818 Domain of unknown function (DU1801) 20 120 6.9E-9 T 29-03-2018 IPR014922 Domain of unknown function DUF1801 AL539_RS18150 93e66db8d2ecec3e3d44fa09e26d984f 146 Pfam PF13778 Domain of unknown function (DUF4174) 25 136 3.4E-25 T 29-03-2018 IPR025232 Domain of unknown function DUF4174 AL539_RS03755 fce582d2899dd72b0a93dfa62922c3ad 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 6.4E-53 T 29-03-2018 IPR021370 Protein of unknown function DUF2987 AL539_RS04200 b423c0d182edae73f4941e43651d8a79 114 PIRSF PIRSF028299 1 113 7.7E-16 T 29-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL539_RS04200 b423c0d182edae73f4941e43651d8a79 114 Pfam PF11777 Protein of unknown function (DUF3316) 2 107 8.1E-12 T 29-03-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL539_RS06975 d749c342201b15cd1f90a708a75b7616 82 Pfam PF04226 Transglycosylase associated protein 33 81 7.0E-13 T 29-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AL539_RS15495 5cd43b37d2148d7bb5c49717da5c61d5 259 Gene3D G3DSA:3.60.21.10 1 253 1.9E-16 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS15495 5cd43b37d2148d7bb5c49717da5c61d5 259 Pfam PF00149 Calcineurin-like phosphoesterase 1 226 3.8E-11 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL539_RS15495 5cd43b37d2148d7bb5c49717da5c61d5 259 SUPERFAMILY SSF56300 1 244 2.58E-17 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS05725 d2c754fac598a26c5a8ea99f77840477 134 Gene3D G3DSA:1.10.10.10 63 134 2.0E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AL539_RS11880 958e90fb98aafafee30f05f3c830e04c 146 Pfam PF10980 Protein of unknown function (DUF2787) 21 141 1.1E-37 T 29-03-2018 IPR021248 Protein of unknown function DUF2787 AL539_RS01450 9c50c7ffc30e8902cd30af45c6aa6c09 254 Gene3D G3DSA:1.20.5.320 77 162 9.9E-4 T 29-03-2018 AL539_RS01450 9c50c7ffc30e8902cd30af45c6aa6c09 254 Gene3D G3DSA:1.25.40.10 163 237 0.34 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS18035 67eda2952746e1b9acdae4af9f2b974e 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 100 2.9E-13 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AL539_RS04100 cc777c4069be6970996bfecd07f07185 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.0E-33 T 29-03-2018 IPR021284 Protein of unknown function DUF2750 AL539_RS02150 63565e08792b8b090866a16918a2c899 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AL539_RS02150 63565e08792b8b090866a16918a2c899 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 6.2E-112 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL539_RS02150 63565e08792b8b090866a16918a2c899 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 37 456 8.4E-58 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL539_RS01130 b44606eb1fb578a20b8941cfe2706a87 159 Pfam PF11284 Protein of unknown function (DUF3085) 70 156 4.0E-19 T 29-03-2018 IPR021436 Protein of unknown function DUF3085 AL539_RS12795 84abcefed03c10759a834b5f66cf608b 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 2.5E-45 T 29-03-2018 IPR019617 Domain of unknown function DUF2489 AL539_RS24540 b8b17da590b17c26fe01e11958f06d59 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 8.2E-22 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AL539_RS15020 9f1034b82914be69ca1404aaca7e1db9 333 Pfam PF01551 Peptidase family M23 174 269 9.5E-31 T 29-03-2018 IPR016047 Peptidase M23 AL539_RS15020 9f1034b82914be69ca1404aaca7e1db9 333 Gene3D G3DSA:2.70.70.10 119 277 9.8E-43 T 29-03-2018 AL539_RS15020 9f1034b82914be69ca1404aaca7e1db9 333 SUPERFAMILY SSF51261 127 271 2.09E-53 T 29-03-2018 IPR011055 Duplicated hybrid motif AL539_RS23265 5fcdcd1b19e3c70ae12473bcd813409f 305 Pfam PF04018 Domain of unknown function (DUF368) 13 257 1.3E-96 T 29-03-2018 IPR007163 Protein of unknown function DUF368 AL539_RS13415 cee0612f28ef59fdf0e601c6e60b0e57 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 8.3E-21 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AL539_RS05610 3e5a3ae88368cd07d73b3c857bc48e59 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 381 5.9E-18 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL539_RS07515 f9f42859b8873c3e1eb6f1b41b722574 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 1.1E-20 T 29-03-2018 IPR021550 Protein of unknown function DUF2897 AL539_RS06495 5f0cba25abd7fe169fca737d3a344c6a 695 Pfam PF05170 AsmA family 1 585 1.4E-119 T 29-03-2018 IPR007844 AsmA AL539_RS08135 644a0a23569d09cb9a7093777ffb0482 327 Pfam PF14057 GGGtGRT protein 7 324 5.3E-174 T 29-03-2018 IPR025964 GGGtGRT protein AL539_RS17950 e6816f1e29eace6f849030e2af7ada47 96 Pfam PF05488 PAAR motif 18 86 4.0E-24 T 29-03-2018 IPR008727 PAAR motif AL539_RS06585 6cdf77fdcde469cf5285582ed807f48b 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.92 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 AL539_RS06585 6cdf77fdcde469cf5285582ed807f48b 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 1.4E-58 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 AL539_RS18300 4b67e7f9a0b92e389bd5d4e6a94f1675 133 Pfam PF04143 Sulphur transport 3 127 3.2E-9 T 29-03-2018 IPR007272 Sulphur transport domain AL539_RS03620 ddfb44e396eefe86cf8720cb27ebc5d6 297 Pfam PF15575 Immunity protein 49 73 281 1.8E-41 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS11555 f714b78872ab963b64641dbf65d158df 198 Pfam PF03942 DTW domain 5 183 2.5E-45 T 29-03-2018 IPR005636 DTW AL539_RS11555 f714b78872ab963b64641dbf65d158df 198 SMART SM01144 1 192 2.6E-57 T 29-03-2018 IPR005636 DTW AL539_RS16845 3ee4b4bed0ea2ee5ceca9b6f64c29282 173 Pfam PF03350 Uncharacterized protein family, UPF0114 8 132 1.6E-21 T 29-03-2018 IPR005134 Uncharacterised protein family UPF0114 AL539_RS00520 1c605b99d837a9a942381b442147134a 376 Gene3D G3DSA:1.10.10.60 153 216 0.46 T 29-03-2018 AL539_RS00520 1c605b99d837a9a942381b442147134a 376 Gene3D G3DSA:1.10.10.60 320 357 0.029 T 29-03-2018 AL539_RS22510 05af5c11bbc1181759e86c55f0dd088d 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 7.2E-30 T 29-03-2018 IPR021432 Protein of unknown function DUF3081 AL539_RS01885 cca900b5bac8573a19626b5e788cf305 159 Pfam PF05433 Glycine zipper 2TM domain 65 105 2.3E-7 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL539_RS15585 df15d73c8af53f44b08f83cf8f0c3c2a 439 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 1.3E-29 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL539_RS15585 df15d73c8af53f44b08f83cf8f0c3c2a 439 Pfam PF07804 HipA-like C-terminal domain 150 402 8.7E-49 T 29-03-2018 IPR012893 HipA-like, C-terminal AL539_RS15585 df15d73c8af53f44b08f83cf8f0c3c2a 439 Pfam PF13657 HipA N-terminal domain 5 103 2.1E-23 T 29-03-2018 IPR017508 HipA, N-terminal subdomain 1 AL539_RS25450 e3bd191401da83c74b15683f03e629f7 485 Pfam PF11840 Protein of unknown function (DUF3360) 2 484 5.9E-266 T 29-03-2018 IPR021794 Protein of unknown function DUF3360 AL539_RS05260 e5a02e1a96172ec7c2ab0c37073b6e71 42 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 2.9E-12 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS10035 19edfec04a05a909f4d9a269143c74cc 298 PIRSF PIRSF038471 2 283 3.7E-83 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL539_RS10035 19edfec04a05a909f4d9a269143c74cc 298 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 2.4E-91 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL539_RS10035 19edfec04a05a909f4d9a269143c74cc 298 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-40 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL539_RS09585 908ff5826f913abb59d86a1e25c6730b 579 Gene3D G3DSA:1.10.443.10 164 413 1.3E-8 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS09440 908ff5826f913abb59d86a1e25c6730b 579 Gene3D G3DSA:1.10.443.10 164 413 1.3E-8 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL539_RS06790 a602df6cd058714bf8c838413c3499ac 227 Gene3D G3DSA:3.40.50.720 143 226 0.0011 T 29-03-2018 AL539_RS06790 a602df6cd058714bf8c838413c3499ac 227 Pfam PF00106 short chain dehydrogenase 7 194 5.8E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL539_RS06790 a602df6cd058714bf8c838413c3499ac 227 SUPERFAMILY SSF51735 1 206 3.09E-21 T 29-03-2018 IPR016040 NAD(P)-binding domain AL539_RS06790 a602df6cd058714bf8c838413c3499ac 227 Gene3D G3DSA:3.40.50.720 1 142 4.1E-12 T 29-03-2018 AL539_RS02695 59feb178d3a6de1428e27cf0b6c99c95 37 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 3.5E-12 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS18275 67928ae8fdf7b3d276eda9280ac9ccee 149 PIRSF PIRSF028065 1 149 3.9E-71 T 29-03-2018 IPR016865 Inner membrane protein RclC AL539_RS18275 67928ae8fdf7b3d276eda9280ac9ccee 149 Pfam PF04224 Protein of unknown function, DUF417 2 145 1.3E-42 T 29-03-2018 IPR007339 Protein of unknown function DUF417 AL539_RS03545 39a26b01bc591054125161d726424033 154 Pfam PF11749 Protein of unknown function (DUF3305) 58 144 2.2E-19 T 29-03-2018 IPR021736 Protein of unknown function DUF3305 AL539_RS09380 9d0c3cdf4de66c8e2b27a8fff3de2fe4 91 Gene3D G3DSA:3.90.580.10 1 79 9.6E-5 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL539_RS06095 868c8b180b073cd6509c7f3869900b62 138 Pfam PF04138 GtrA-like protein 18 137 9.1E-22 T 29-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AL539_RS16040 1be43cb50b48f290d1aee1eab5e803a3 299 Gene3D G3DSA:3.40.190.10 4 179 6.9E-4 T 29-03-2018 AL539_RS09215 b2195a39d9a2f57b00148afd18e2644e 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 2.5E-27 T 29-03-2018 IPR018692 Predicted integral membrane protein DUF2189 AL539_RS21015 88a3891ff7711ec93f94ba41faca8296 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 1.3E-73 T 29-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AL539_RS21015 88a3891ff7711ec93f94ba41faca8296 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 67.04 T 29-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AL539_RS21015 88a3891ff7711ec93f94ba41faca8296 278 Gene3D G3DSA:3.40.50.300 45 275 0.0029 T 29-03-2018 AL539_RS10290 6c066d7e3339d2f4105c617a46a7bddc 171 PIRSF PIRSF016481 1 171 7.2E-51 T 29-03-2018 IPR007446 Pilus assembly protein PilP AL539_RS10290 6c066d7e3339d2f4105c617a46a7bddc 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 4.9E-43 T 29-03-2018 IPR007446 Pilus assembly protein PilP AL539_RS17710 a0eccb5de9e9e1ddc8c5093d40b123cf 248 Pfam PF04288 MukE-like family 17 242 7.2E-118 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL539_RS17710 a0eccb5de9e9e1ddc8c5093d40b123cf 248 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 17 245 49.405 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL539_RS09760 562bc80a8801482a5ff4bc52448c63bf 103 PIRSF PIRSF000699 1 103 1.1E-37 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL539_RS09760 562bc80a8801482a5ff4bc52448c63bf 103 Gene3D G3DSA:1.20.58.80 1 99 8.1E-35 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL539_RS09760 562bc80a8801482a5ff4bc52448c63bf 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 8.2E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL539_RS09760 562bc80a8801482a5ff4bc52448c63bf 103 SUPERFAMILY SSF46973 2 98 1.7E-34 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL539_RS17380 b6aedd9f17f8966273965954a41e68f6 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 8.3E-30 T 29-03-2018 IPR010824 Protein of unknown function DUF1425 AL539_RS15690 ccf56a4dea470a54aaa086ce9805d815 89 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 54 2.8E-14 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AL539_RS13660 22f6ceba4f598f06731feecf49299aeb 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 26 152 1.8E-32 T 29-03-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AL539_RS02825 1531780ef800a19f97fe3a0f52d9372f 117 SUPERFAMILY SSF142906 1 115 1.96E-38 T 29-03-2018 AL539_RS02825 1531780ef800a19f97fe3a0f52d9372f 117 Pfam PF04237 YjbR 15 102 9.6E-25 T 29-03-2018 IPR007351 Uncharacterised protein YjbR AL539_RS06895 87c11f5e84f64fccdc19285b0cdd6199 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 1.8E-28 T 29-03-2018 IPR009749 Protein of unknown function DUF1315 AL539_RS18700 dff932ecff254abdc35707bc98a77aa4 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 8.7E-29 T 29-03-2018 IPR018680 Protein of unknown function DUF2164 AL539_RS00055 09395ccbe4ede281f536a9d9ae7a5fa9 124 Pfam PF04956 TrbC/VIRB2 family 6 100 1.3E-7 T 29-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AL539_RS05295 73ef67cfcb4f7f0a1a93f9ea5e013651 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 5.5E-16 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS03610 2d0736b44dfc34250ff307483a1c237b 295 Pfam PF15575 Immunity protein 49 63 279 1.4E-43 T 29-03-2018 IPR029074 Immunity protein 49 AL539_RS16570 0746e6f288a89169db2cb6bfed7dc131 469 Gene3D G3DSA:2.40.160.10 2 468 1.6E-47 T 29-03-2018 AL539_RS04785 9de472b9f37503267b9437678f82cc86 110 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 20 103 1.3E-11 T 29-03-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein AL539_RS21505 140b26a7bc7af8fa59b836f0c1eecda3 88 Pfam PF03891 Domain of unknown function (DUF333) 34 78 9.6E-18 T 29-03-2018 IPR005590 Protein of unknown function DUF333 AL539_RS25995 94e34f8d92a980ca3aa6dc2086fd4d3e 418 Pfam PF03222 Tryptophan/tyrosine permease family 30 408 8.2E-18 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL539_RS18215 8aaa9782271490351e048e8d143a1a29 522 Pfam PF08811 Protein of unknown function (DUF1800) 43 504 2.8E-86 T 29-03-2018 IPR014917 Protein of unknown function DUF1800 AL539_RS19710 738a4ec8a9bb870fadace41d6556e5a4 42 Pfam PF10617 Protein of unknown function (DUF2474) 4 42 1.3E-17 T 29-03-2018 IPR018895 Protein of unknown function DUF2474 AL539_RS01615 1d3e06fd1394574c6ca87a66b619c288 533 Pfam PF03553 Na+/H+ antiporter family 165 497 5.9E-108 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL539_RS19085 d8c6452a0a675ff994e16980c8b41ee3 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 1.9E-15 T 29-03-2018 IPR024467 Domain of unknown function DUF2384 AL539_RS19085 d8c6452a0a675ff994e16980c8b41ee3 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 24 150 2.7E-32 T 29-03-2018 IPR011979 Conserved hypothetical protein CHP02293 AL539_RS07630 dd449df7d402a5573af78831450daa3c 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 1.3E-137 T 29-03-2018 IPR020010 Conserved hypothetical protein CHP03503 AL539_RS24785 e1021bc4b7554d1c6da7d4ce5bf233ee 173 SUPERFAMILY SSF49503 62 171 4.4E-20 T 29-03-2018 IPR008972 Cupredoxin AL539_RS24785 e1021bc4b7554d1c6da7d4ce5bf233ee 173 Gene3D G3DSA:2.60.40.420 61 173 2.0E-13 T 29-03-2018 IPR008972 Cupredoxin AL539_RS16755 ec6b76e446431666c7552054a02ab2d4 257 Pfam PF08907 Domain of unknown function (DUF1853) 29 202 3.2E-38 T 29-03-2018 IPR015003 Protein of unknown function DUF1853 AL539_RS13455 d50fb04d9fa7a542abc4a304a080785a 217 Pfam PF11726 Inovirus Gp2 26 215 1.1E-53 T 29-03-2018 AL539_RS20995 c9ed1cfb70074693a0758eee0210c4aa 130 Pfam PF12614 Ribosome recycling factor 4 128 1.3E-57 T 29-03-2018 IPR022253 Ribosome recycling factor. bacterial AL539_RS15485 19e0a1064b9aeb390ff3c71c0bb5a2ba 281 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 35 236 3.9E-10 T 29-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AL539_RS21715 138f001a505ff06e701f7706bcadbbc6 320 Gene3D G3DSA:3.10.350.10 3 46 0.02 T 29-03-2018 AL539_RS02085 6eb8c0cb1026b5c73b952c8caafb125b 182 Gene3D G3DSA:2.40.160.60 13 181 1.1E-5 T 29-03-2018 AL539_RS19675 549f644e42c637862a9c5c75ab586d55 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 1.1E-32 T 29-03-2018 IPR014991 Protein of unknown function DUF1840 AL539_RS18615 88d0f72ec8719da2ca6da71c1aa57e27 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 3.6E-33 T 29-03-2018 IPR021811 Protein of unknown function DUF3389 AL539_RS14610 d1a6dd66041b6e71e406408fb24753bd 152 Pfam PF05258 Protein of unknown function (DUF721) 11 85 8.3E-13 T 29-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AL539_RS24510 009c64640966925d95daaf4d497a42ca 90 Pfam PF07383 Protein of unknown function (DUF1496) 36 86 1.0E-21 T 29-03-2018 IPR009971 Protein of unknown function DUF1496 AL539_RS14235 0cbcb962f702c5a5118cb14edae44269 190 SUPERFAMILY SSF56300 20 175 5.94E-12 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS14235 0cbcb962f702c5a5118cb14edae44269 190 Gene3D G3DSA:3.60.21.10 21 190 2.1E-13 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AL539_RS22490 daafa4e24a31df5040c63578d25cb3b9 147 Pfam PF07681 DoxX 18 103 8.8E-24 T 29-03-2018 IPR032808 DoxX family AL539_RS18940 289490c4f1419473c4ec9976353be1ea 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 1.8E-30 T 29-03-2018 IPR032036 Protein of unknown function DUF5062 AL539_RS05110 cf152fae60ec68006f07ae514797c9a7 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 7.2E-15 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS07540 d314539c463d9be0947879b5db91a2ea 357 Pfam PF01594 AI-2E family transporter 20 344 2.2E-74 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AL539_RS23600 f2d2d69f1236128ff12a7b1af9853d30 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 5.1E-26 T 29-03-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich AL539_RS23600 f2d2d69f1236128ff12a7b1af9853d30 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 4.0E-22 T 29-03-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich AL539_RS17515 f0376cac865b66e3ccbc302507f96059 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 2.0E-264 T 29-03-2018 IPR021794 Protein of unknown function DUF3360 AL539_RS05370 591f3cd3accab9813f7aa54ab8041ff7 169 Gene3D G3DSA:1.25.40.10 22 169 2.1E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AL539_RS04240 70de8bb32a9ec9cd2aaab804aa2b397f 194 Pfam PF01810 LysE type translocator 14 193 4.0E-15 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL539_RS13180 48d817f0ccd01db575fa19847936620a 254 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 176 2.8E-29 T 29-03-2018 IPR002654 Glycosyl transferase, family 25 AL539_RS21890 ab7e3629c7cbc6ccfbb193a3187ca9ba 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 2.4E-33 T 29-03-2018 IPR007416 Protein of unknown function DUF469 AL539_RS16370 47bb67897aa88cdad158f5b47ae2a72f 149 Pfam PF04214 Protein of unknown function, DUF 48 118 8.7E-30 T 29-03-2018 IPR007332 Protein of unknown function DUF411 AL539_RS12660 fe053a691e561b744f8b774696c6bc24 145 Pfam PF09537 Domain of unknown function (DUF2383) 4 112 2.6E-18 T 29-03-2018 IPR019052 Domain of unknown function DUF2383 AL539_RS05230 a982482d05a8dbf12c3fca8222d97a7f 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.1E-11 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS03440 c40e84010717f79ea231212670fd5a61 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 4.6E-43 T 29-03-2018 IPR020979 Uncharacterised protein family A0KLC6 AL539_RS24650 bb1d34571a30fc4e661b229baeba423d 358 Pfam PF03824 High-affinity nickel-transport protein 13 355 1.6E-46 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AL539_RS00615 e9fb2978a0a8d814dd8154b750c71110 479 Pfam PF06122 Conjugative relaxosome accessory transposon protein 36 401 1.1E-95 T 29-03-2018 IPR010927 Type IV conjugative transfer system protein TraH AL539_RS18395 da1340ab61a9351a705664cca6d2cfcb 106 Pfam PF10719 Late competence development protein ComFB 8 85 1.1E-16 T 29-03-2018 IPR019657 Late competence development protein ComFB AL539_RS21835 fcbf15051632f152a3197692305ac23e 134 SUPERFAMILY SSF54403 52 115 2.25E-7 T 29-03-2018 AL539_RS03320 b35997de84cc4595d53dbd56c63242fd 212 Pfam PF02397 Bacterial sugar transferase 14 207 2.7E-62 T 29-03-2018 IPR003362 Bacterial sugar transferase AL539_RS17640 60108145d2512b73d836eedb62438562 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 5.1E-42 T 29-03-2018 IPR019633 Protein of unknown function DUF2498 AL539_RS21830 d3e175fc76cce013ae65d69e041081e8 32 Pfam PF10617 Protein of unknown function (DUF2474) 3 29 3.7E-8 T 29-03-2018 IPR018895 Protein of unknown function DUF2474 AL539_RS02360 54006e6fd4ffaac817dec48f847c39d7 225 Pfam PF04172 LrgB-like family 6 218 1.0E-69 T 29-03-2018 IPR007300 CidB/LrgB family AL539_RS23070 73e8ad2d0359f3e8a52c0a8bb0a5fec8 150 Pfam PF04519 Polymer-forming cytoskeletal 18 112 4.2E-25 T 29-03-2018 IPR007607 Protein of unknown function DUF583 AL539_RS22990 4489a6ae359074f0b0c600ef708f6a7c 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 1.1E-37 T 29-03-2018 IPR021724 Protein of unknown function DUF3297 AL539_RS06785 2f4c8d80bd04907561a4c396ff836f8b 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 2.7E-62 T 29-03-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) AL539_RS05265 82d0c440d77d1384f43916d1c79c6a45 45 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 3.3E-13 T 29-03-2018 IPR021681 Protein of unknown function DUF3265 AL539_RS22505 ef39959412abfed67c69bd7d3d7c7fa7 117 Pfam PF04219 Protein of unknown function, DUF 12 100 1.1E-35 T 29-03-2018 IPR007335 Protein of unknown function DUF413 AL539_RS13465 bd0156de49adeaca370e9939a50f022e 274 Pfam PF13280 WYL domain 163 248 4.1E-7 T 29-03-2018 IPR026881 WYL domain AL539_RS03850 eed2a77f053d999dd388730852c261c6 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 3.2E-41 T 29-03-2018 IPR022090 Protein of unknown function DUF3634 AL539_RS06270 e907ffcc2a3e7077b03569b92ee31014 257 Gene3D G3DSA:2.40.160.20 13 257 1.3E-7 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AL539_RS25540 3e64a3dc7db37737004b273fa375f7bc 117 Pfam PF11225 Protein of unknown function (DUF3024) 58 116 3.9E-18 T 29-03-2018 IPR021388 Bacteriophage 933W, L0084