AL541_RS00005	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
AL541_RS00010	PF05656	AL541_RS00010
AL541_RS00015	PF01541	GIY-YIG catalytic domain
AL541_RS00020	PF11333	AL541_RS00020
AL541_RS00025	PF13412	Winged helix-turn-helix DNA-binding
AL541_RS00030	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AL541_RS00035	PF06005	Protein of unknown function (DUF904)
AL541_RS00040	PF03737	Demethylmenaquinone methyltransferase
AL541_RS00045	PF01040	UbiA prenyltransferase family
AL541_RS00050	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS00050	PF07724	AAA domain (Cdc48 subfamily)
AL541_RS00055	PF00227	Proteasome subunit
AL541_RS00060	PF05036	Sporulation related domain
AL541_RS00065	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS00065	PF13377	Periplasmic binding protein-like domain
AL541_RS00070	PF00270	DEAD/DEAH box helicase
AL541_RS00070	PF00271	Helicase conserved C-terminal domain
AL541_RS00080	PF01197	Ribosomal protein L31
AL541_RS00085	PF00338	Ribosomal protein S10p/S20e
AL541_RS00090	PF00297	Ribosomal protein L3
AL541_RS00095	PF00573	Ribosomal protein L4/L1 family
AL541_RS00100	PF00276	Ribosomal protein L23
AL541_RS00105	PF00181	Ribosomal Proteins L2, RNA binding domain
AL541_RS00105	PF03947	Ribosomal Proteins L2, C-terminal domain
AL541_RS00110	PF00203	Ribosomal protein S19
AL541_RS00115	PF00237	Ribosomal protein L22p/L17e
AL541_RS00120	PF00189	Ribosomal protein S3, C-terminal domain
AL541_RS00120	PF07650	KH domain
AL541_RS00125	PF00252	Ribosomal protein L16p/L10e
AL541_RS00130	PF00831	Ribosomal L29 protein
AL541_RS00135	PF00366	Ribosomal protein S17
AL541_RS00140	PF00238	Ribosomal protein L14p/L23e
AL541_RS00145	PF00467	KOW motif
AL541_RS00145	PF17136	AL541_RS00145
AL541_RS00150	PF00281	Ribosomal protein L5
AL541_RS00150	PF00673	ribosomal L5P family C-terminus
AL541_RS00155	PF00253	Ribosomal protein S14p/S29e
AL541_RS00160	PF00410	Ribosomal protein S8
AL541_RS00165	PF00347	Ribosomal protein L6
AL541_RS00170	PF00861	Ribosomal L18p/L5e family
AL541_RS00175	PF00333	Ribosomal protein S5, N-terminal domain
AL541_RS00175	PF03719	Ribosomal protein S5, C-terminal domain
AL541_RS00180	PF00327	Ribosomal protein L30p/L7e
AL541_RS00185	PF00828	Ribosomal protein L18e/L15
AL541_RS00190	PF00344	SecY translocase
AL541_RS00195	PF00444	Ribosomal protein L36
AL541_RS00200	PF00416	Ribosomal protein S13/S18
AL541_RS00205	PF00411	Ribosomal protein S11
AL541_RS00210	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL541_RS00210	PF01479	S4 domain
AL541_RS00215	PF01000	RNA polymerase Rpb3/RpoA insert domain
AL541_RS00215	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AL541_RS00215	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL541_RS00220	PF01196	Ribosomal protein L17
AL541_RS00225	PF11075	AL541_RS00225
AL541_RS00230	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL541_RS00230	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL541_RS00235	PF04225	Opacity-associated protein A LysM-like domain
AL541_RS00235	PF08525	AL541_RS00235
AL541_RS00240	PF13673	Acetyltransferase (GNAT) domain
AL541_RS00245	PF00270	DEAD/DEAH box helicase
AL541_RS00245	PF00271	Helicase conserved C-terminal domain
AL541_RS00245	PF03880	DbpA RNA binding domain
AL541_RS00250	PF00027	Cyclic nucleotide-binding domain
AL541_RS00255	PF00149	Calcineurin-like phosphoesterase
AL541_RS00255	PF02872	5'-nucleotidase, C-terminal domain
AL541_RS00260	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL541_RS00265	PF01507	Phosphoadenosine phosphosulfate reductase family
AL541_RS00270	PF00009	Elongation factor Tu GTP binding domain
AL541_RS00275	PF02080	TrkA-C domain
AL541_RS00275	PF03600	Citrate transporter
AL541_RS00280	PF01583	Adenylylsulphate kinase
AL541_RS00285	PF10987	AL541_RS00285
AL541_RS00290	PF11736	Protein of unknown function (DUF3299)
AL541_RS00295	PF02687	AL541_RS00295
AL541_RS00295	PF12704	MacB-like periplasmic core domain
AL541_RS00300	PF00005	ABC transporter
AL541_RS00305	PF10986	AL541_RS00305
AL541_RS00310	PF10795	AL541_RS00310
AL541_RS00315	PF09695	AL541_RS00315
AL541_RS00320	PF06526	Protein of unknown function (DUF1107)
AL541_RS00325	PF01625	Peptide methionine sulfoxide reductase
AL541_RS00330	PF01103	Surface antigen
AL541_RS00330	PF07244	Surface antigen variable number repeat
AL541_RS00330	PF17243	AL541_RS00330
AL541_RS00335	PF04357	AL541_RS00335
AL541_RS00340	PF06094	AIG2-like family
AL541_RS00345	PF10973	AL541_RS00345
AL541_RS00350	PF00719	Inorganic pyrophosphatase
AL541_RS00355	PF00316	Fructose-1-6-bisphosphatase
AL541_RS00365	PF01225	Mur ligase family, catalytic domain
AL541_RS00365	PF02875	Mur ligase family, glutamate ligase domain
AL541_RS00365	PF08245	Mur ligase middle domain
AL541_RS00370	PF02441	Flavoprotein
AL541_RS00375	PF13343	Bacterial extracellular solute-binding protein
AL541_RS00380	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS00385	PF00005	ABC transporter
AL541_RS00390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS00390	PF03466	LysR substrate binding domain
AL541_RS00395	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL541_RS00400	PF00582	Universal stress protein family
AL541_RS00405	PF06808	AL541_RS00405
AL541_RS00405	PF11874	AL541_RS00405
AL541_RS00415	PF16868	AL541_RS00415
AL541_RS00425	PF01316	Arginine repressor, DNA binding domain
AL541_RS00425	PF02863	Arginine repressor, C-terminal domain
AL541_RS00430	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL541_RS00430	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL541_RS00440	PF00348	Polyprenyl synthetase
AL541_RS00445	PF00829	Ribosomal prokaryotic L21 protein
AL541_RS00450	PF01016	Ribosomal L27 protein
AL541_RS00455	PF01018	GTP1/OBG
AL541_RS00455	PF01926	50S ribosome-binding GTPase
AL541_RS00460	PF06738	AL541_RS00460
AL541_RS00465	PF12821	AL541_RS00465
AL541_RS00470	PF00186	Dihydrofolate reductase
AL541_RS00475	PF00149	Calcineurin-like phosphoesterase
AL541_RS00480	PF04379	Protein of unknown function (DUF525)
AL541_RS00485	PF00398	Ribosomal RNA adenine dimethylase
AL541_RS00490	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL541_RS00495	PF09312	SurA N-terminal domain
AL541_RS00495	PF13616	PPIC-type PPIASE domain
AL541_RS00500	PF03968	OstA-like protein
AL541_RS00500	PF04453	Organic solvent tolerance protein
AL541_RS00505	PF00226	DnaJ domain
AL541_RS00505	PF05099	Tellurite resistance protein TerB
AL541_RS00510	PF04784	AL541_RS00510
AL541_RS00515	PF00694	Aconitase C-terminal domain
AL541_RS00520	PF00330	Aconitase family (aconitate hydratase)
AL541_RS00525	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL541_RS00530	PF00682	HMGL-like
AL541_RS00530	PF08502	LeuA allosteric (dimerisation) domain
AL541_RS00540	PF08239	Bacterial SH3 domain
AL541_RS00545	PF01569	PAP2 superfamily
AL541_RS00550	PF13528	Glycosyl transferase family 1
AL541_RS00555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS00555	PF03466	LysR substrate binding domain
AL541_RS00560	PF00501	AMP-binding enzyme
AL541_RS00565	PF00205	Thiamine pyrophosphate enzyme, central domain
AL541_RS00565	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL541_RS00565	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL541_RS00570	PF10369	Small subunit of acetolactate synthase
AL541_RS00570	PF13710	ACT domain
AL541_RS00575	PF00990	GGDEF domain
AL541_RS00575	PF02743	Cache domain
AL541_RS00575	PF13426	PAS domain
AL541_RS00580	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS00585	PF00224	Pyruvate kinase, barrel domain
AL541_RS00585	PF02887	Pyruvate kinase, alpha/beta domain
AL541_RS00590	PF00455	AL541_RS00590
AL541_RS00590	PF08220	DeoR-like helix-turn-helix domain
AL541_RS00595	PF01380	SIS domain
AL541_RS00595	PF13522	Glutamine amidotransferase domain
AL541_RS00600	PF00465	Iron-containing alcohol dehydrogenase
AL541_RS00605	PF02733	Dak1 domain
AL541_RS00610	PF02734	DAK2 domain
AL541_RS00615	PF00381	PTS HPr component phosphorylation site
AL541_RS00615	PF00391	PEP-utilising enzyme, mobile domain
AL541_RS00615	PF02896	PEP-utilising enzyme, TIM barrel domain
AL541_RS00615	PF03610	PTS system fructose IIA component
AL541_RS00615	PF05524	PEP-utilising enzyme, N-terminal
AL541_RS00620	PF00158	Sigma-54 interaction domain
AL541_RS00620	PF00989	PAS fold
AL541_RS00620	PF02954	Bacterial regulatory protein, Fis family
AL541_RS00625	PF05068	Mannitol repressor
AL541_RS00630	PF01232	Mannitol dehydrogenase Rossmann domain
AL541_RS00630	PF08125	Mannitol dehydrogenase C-terminal domain
AL541_RS00635	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS00635	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS00635	PF02378	Phosphotransferase system, EIIC
AL541_RS00640	PF13444	Acetyltransferase (GNAT) domain
AL541_RS00645	PF04402	Protein of unknown function (DUF541)
AL541_RS00655	PF03180	NLPA lipoprotein
AL541_RS00660	PF00589	Phage integrase family
AL541_RS00660	PF13356	Domain of unknown function (DUF4102)
AL541_RS00690	PF14350	AL541_RS00690
AL541_RS00695	PF06114	Domain of unknown function (DUF955)
AL541_RS00710	PF07804	HipA-like C-terminal domain
AL541_RS00710	PF13657	HipA N-terminal domain
AL541_RS00725	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL541_RS00730	PF01396	AL541_RS00730
AL541_RS00730	PF04471	Restriction endonuclease
AL541_RS00735	PF04245	AL541_RS00735
AL541_RS00745	PF07804	HipA-like C-terminal domain
AL541_RS00745	PF13657	HipA N-terminal domain
AL541_RS00750	PF01381	Helix-turn-helix
AL541_RS00760	PF00140	Sigma-70 factor, region 1
AL541_RS00760	PF03979	Sigma-70 factor, region 1
AL541_RS00760	PF04539	Sigma-70 region 3
AL541_RS00760	PF04542	Sigma-70 region 2
AL541_RS00760	PF04545	Sigma-70, region 4
AL541_RS00760	PF04546	Sigma-70, non-essential region
AL541_RS00765	PF01807	CHC2 zinc finger
AL541_RS00765	PF08275	DNA primase catalytic core, N-terminal domain
AL541_RS00765	PF08278	DNA primase DnaG DnaB-binding
AL541_RS00765	PF10410	DnaB-helicase binding domain of primase
AL541_RS00765	PF13155	Toprim-like
AL541_RS00770	PF09424	Yqey-like protein
AL541_RS00775	PF01165	Ribosomal protein S21
AL541_RS00780	PF00814	Glycoprotease family
AL541_RS00785	PF00561	alpha/beta hydrolase fold
AL541_RS00790	PF02660	AL541_RS00790
AL541_RS00795	PF02152	Dihydroneopterin aldolase
AL541_RS00800	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL541_RS00805	PF02673	AL541_RS00805
AL541_RS00810	PF01743	Poly A polymerase head domain
AL541_RS00810	PF01966	HD domain
AL541_RS00810	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL541_RS00815	PF01471	Putative peptidoglycan binding domain
AL541_RS00815	PF13401	AAA domain
AL541_RS00820	PF16537	AL541_RS00820
AL541_RS00825	PF01019	Gamma-glutamyltranspeptidase
AL541_RS00830	PF08239	Bacterial SH3 domain
AL541_RS00835	PF01384	AL541_RS00835
AL541_RS00840	PF01865	Protein of unknown function DUF47
AL541_RS00845	PF01928	CYTH domain
AL541_RS00845	PF05235	CHAD domain
AL541_RS00850	PF07885	Ion channel
AL541_RS00855	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS00860	PF03710	Glutamate-ammonia ligase adenylyltransferase
AL541_RS00860	PF08335	GlnD PII-uridylyltransferase
AL541_RS00865	PF00294	pfkB family carbohydrate kinase
AL541_RS00865	PF01467	Cytidylyltransferase
AL541_RS00870	PF02321	Outer membrane efflux protein
AL541_RS00875	PF00293	NUDIX domain
AL541_RS00880	PF06853	AL541_RS00880
AL541_RS00885	PF00149	Calcineurin-like phosphoesterase
AL541_RS00890	PF05728	Uncharacterised protein family (UPF0227)
AL541_RS00895	PF00204	DNA gyrase B
AL541_RS00895	PF00986	DNA gyrase B subunit, carboxyl terminus
AL541_RS00895	PF01751	Toprim domain
AL541_RS00895	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS00900	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL541_RS00900	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL541_RS00905	PF13180	PDZ domain
AL541_RS00905	PF13365	Trypsin-like peptidase domain
AL541_RS00910	PF00595	PDZ domain (Also known as DHR or GLGF)
AL541_RS00910	PF13180	PDZ domain
AL541_RS00910	PF13365	Trypsin-like peptidase domain
AL541_RS00915	PF06295	AL541_RS00915
AL541_RS00925	PF03969	AFG1-like ATPase
AL541_RS00935	PF00572	Ribosomal protein L13
AL541_RS00940	PF00380	Ribosomal protein S9/S16
AL541_RS00945	PF00355	Rieske [2Fe-2S] domain
AL541_RS00945	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AL541_RS00950	PF00032	Cytochrome b(C-terminal)/b6/petD
AL541_RS00950	PF00033	Cytochrome b(N-terminal)/b6/petB
AL541_RS00955	PF02167	Cytochrome C1 family
AL541_RS00960	PF00043	Glutathione S-transferase, C-terminal domain
AL541_RS00960	PF13417	Glutathione S-transferase, N-terminal domain
AL541_RS00965	PF04386	Stringent starvation protein B
AL541_RS00970	PF04972	BON domain
AL541_RS00975	PF13580	SIS domain
AL541_RS00980	PF02021	Uncharacterised protein family UPF0102
AL541_RS00985	PF04348	LppC putative lipoprotein
AL541_RS00990	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL541_RS01005	PF01795	MraW methylase family
AL541_RS01010	PF04999	AL541_RS01010
AL541_RS01015	PF00905	Penicillin binding protein transpeptidase domain
AL541_RS01015	PF03717	Penicillin-binding Protein dimerisation domain
AL541_RS01020	PF01225	Mur ligase family, catalytic domain
AL541_RS01020	PF02875	Mur ligase family, glutamate ligase domain
AL541_RS01020	PF08245	Mur ligase middle domain
AL541_RS01025	PF01225	Mur ligase family, catalytic domain
AL541_RS01025	PF02875	Mur ligase family, glutamate ligase domain
AL541_RS01025	PF08245	Mur ligase middle domain
AL541_RS01030	PF00953	Glycosyl transferase family 4
AL541_RS01030	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AL541_RS01035	PF02875	Mur ligase family, glutamate ligase domain
AL541_RS01035	PF08245	Mur ligase middle domain
AL541_RS01040	PF01098	AL541_RS01040
AL541_RS01045	PF03033	Glycosyltransferase family 28 N-terminal domain
AL541_RS01045	PF04101	Glycosyltransferase family 28 C-terminal domain
AL541_RS01050	PF01225	Mur ligase family, catalytic domain
AL541_RS01050	PF02875	Mur ligase family, glutamate ligase domain
AL541_RS01050	PF08245	Mur ligase middle domain
AL541_RS01055	PF03799	Cell division protein FtsQ
AL541_RS01055	PF08478	POTRA domain, FtsQ-type
AL541_RS01060	PF02491	SHS2 domain inserted in FTSA
AL541_RS01060	PF14450	Cell division protein FtsA
AL541_RS01065	PF00091	Tubulin/FtsZ family, GTPase domain
AL541_RS01065	PF12327	FtsZ family, C-terminal domain
AL541_RS01070	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AL541_RS01075	PF05258	AL541_RS01075
AL541_RS01080	PF01043	SecA preprotein cross-linking domain
AL541_RS01080	PF02810	SEC-C motif
AL541_RS01080	PF07516	SecA Wing and Scaffold domain
AL541_RS01080	PF07517	SecA DEAD-like domain
AL541_RS01085	PF00293	NUDIX domain
AL541_RS01090	PF01113	Dihydrodipicolinate reductase, N-terminus
AL541_RS01090	PF05173	Dihydrodipicolinate reductase, C-terminus
AL541_RS01095	PF00117	Glutamine amidotransferase class-I
AL541_RS01095	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AL541_RS01100	PF02142	MGS-like domain
AL541_RS01100	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL541_RS01100	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL541_RS01115	PF01925	AL541_RS01115
AL541_RS01120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS01120	PF03466	LysR substrate binding domain
AL541_RS01125	PF03458	AL541_RS01125
AL541_RS01130	PF01497	Periplasmic binding protein
AL541_RS01135	PF03186	AL541_RS01135
AL541_RS01140	PF01048	Phosphorylase superfamily
AL541_RS01145	PF07386	AL541_RS01145
AL541_RS01150	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS01150	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL541_RS01155	PF00310	Glutamine amidotransferases class-II
AL541_RS01155	PF01493	GXGXG motif
AL541_RS01155	PF01645	Conserved region in glutamate synthase
AL541_RS01155	PF04898	Glutamate synthase central domain
AL541_RS01160	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS01160	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL541_RS01165	PF00310	Glutamine amidotransferases class-II
AL541_RS01165	PF01493	GXGXG motif
AL541_RS01165	PF01645	Conserved region in glutamate synthase
AL541_RS01165	PF04898	Glutamate synthase central domain
AL541_RS01170	PF04055	Radical SAM superfamily
AL541_RS01170	PF16199	AL541_RS01170
AL541_RS01175	PF00990	GGDEF domain
AL541_RS01175	PF08448	PAS fold
AL541_RS01175	PF13188	PAS domain
AL541_RS01180	PF00072	Response regulator receiver domain
AL541_RS01180	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS01180	PF01627	Hpt domain
AL541_RS01180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS01180	PF08448	PAS fold
AL541_RS01190	PF00072	Response regulator receiver domain
AL541_RS01190	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS01200	PF11697	AL541_RS01200
AL541_RS01205	PF03737	Demethylmenaquinone methyltransferase
AL541_RS01220	PF00696	Amino acid kinase family
AL541_RS01220	PF00742	Homoserine dehydrogenase
AL541_RS01220	PF01842	ACT domain
AL541_RS01220	PF03447	Homoserine dehydrogenase, NAD binding domain
AL541_RS01220	PF13840	ACT domain
AL541_RS01225	PF00288	GHMP kinases N terminal domain
AL541_RS01225	PF08544	GHMP kinases C terminal
AL541_RS01230	PF00291	Pyridoxal-phosphate dependent enzyme
AL541_RS01230	PF14821	Threonine synthase N terminus
AL541_RS01235	PF03358	NADPH-dependent FMN reductase
AL541_RS01240	PF01228	Glycine radical
AL541_RS01245	PF01261	Xylose isomerase-like TIM barrel
AL541_RS01255	PF03167	Uracil DNA glycosylase superfamily
AL541_RS01260	PF01814	Hemerythrin HHE cation binding domain
AL541_RS01265	PF12065	AL541_RS01265
AL541_RS01270	PF01235	AL541_RS01270
AL541_RS01275	PF03883	AL541_RS01275
AL541_RS01280	PF00270	DEAD/DEAH box helicase
AL541_RS01280	PF00271	Helicase conserved C-terminal domain
AL541_RS01285	PF05175	Methyltransferase small domain
AL541_RS01290	PF05525	AL541_RS01290
AL541_RS01295	PF00258	Flavodoxin
AL541_RS01300	PF00589	Phage integrase family
AL541_RS01300	PF02899	Phage integrase, N-terminal SAM-like domain
AL541_RS01305	PF10411	Disulfide bond isomerase protein N-terminus
AL541_RS01305	PF13098	Thioredoxin-like domain
AL541_RS01310	PF01368	DHH family
AL541_RS01310	PF02272	DHHA1 domain
AL541_RS01320	PF00152	tRNA synthetases class II (D, K and N)
AL541_RS01320	PF01336	OB-fold nucleic acid binding domain
AL541_RS01325	PF00158	Sigma-54 interaction domain
AL541_RS01325	PF02954	Bacterial regulatory protein, Fis family
AL541_RS01335	PF00248	Aldo/keto reductase family
AL541_RS01345	PF02976	DNA mismatch repair enzyme MutH
AL541_RS01350	PF00293	NUDIX domain
AL541_RS01355	PF00391	PEP-utilising enzyme, mobile domain
AL541_RS01355	PF01590	GAF domain
AL541_RS01355	PF02896	PEP-utilising enzyme, TIM barrel domain
AL541_RS01355	PF05524	PEP-utilising enzyme, N-terminal
AL541_RS01360	PF01925	AL541_RS01360
AL541_RS01365	PF01790	AL541_RS01365
AL541_RS01370	PF00303	Thymidylate synthase
AL541_RS01375	PF08014	AL541_RS01375
AL541_RS01380	PF02690	AL541_RS01380
AL541_RS01385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS01385	PF03466	LysR substrate binding domain
AL541_RS01390	PF01022	Bacterial regulatory protein, arsR family
AL541_RS01395	PF01649	Ribosomal protein S20
AL541_RS01400	PF03023	AL541_RS01400
AL541_RS01405	PF01687	Riboflavin kinase
AL541_RS01405	PF06574	FAD synthetase
AL541_RS01410	PF00133	tRNA synthetases class I (I, L, M and V)
AL541_RS01410	PF06827	Zinc finger found in FPG and IleRS
AL541_RS01410	PF08264	Anticodon-binding domain of tRNA
AL541_RS01415	PF01252	AL541_RS01415
AL541_RS01420	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL541_RS01425	PF02401	LytB protein
AL541_RS01430	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL541_RS01435	PF00072	Response regulator receiver domain
AL541_RS01435	PF04397	LytTr DNA-binding domain
AL541_RS01440	PF06580	AL541_RS01440
AL541_RS01440	PF07694	5TMR of 5TMR-LYT
AL541_RS01440	PF13492	GAF domain
AL541_RS01445	PF02554	AL541_RS01445
AL541_RS01445	PF13722	AL541_RS01445
AL541_RS01450	PF10973	AL541_RS01450
AL541_RS01460	PF13580	SIS domain
AL541_RS01465	PF03702	Uncharacterised protein family (UPF0075)
AL541_RS01470	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL541_RS01475	PF00793	DAHP synthetase I family
AL541_RS01480	PF01817	Chorismate mutase type II
AL541_RS01480	PF02153	Prephenate dehydrogenase
AL541_RS01485	PF01551	Peptidase family M23
AL541_RS01490	PF07238	PilZ domain
AL541_RS01495	PF00005	ABC transporter
AL541_RS01495	PF12848	ABC transporter
AL541_RS01500	PF01464	Transglycosylase SLT domain
AL541_RS01500	PF14718	Soluble lytic murein transglycosylase L domain
AL541_RS01505	PF01371	Trp repressor protein
AL541_RS01510	PF01931	Protein of unknown function DUF84
AL541_RS01515	PF00800	Prephenate dehydratase
AL541_RS01515	PF01817	Chorismate mutase type II
AL541_RS01520	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL541_RS01525	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS01525	PF01464	Transglycosylase SLT domain
AL541_RS01530	PF13525	Outer membrane lipoprotein
AL541_RS01535	PF00849	RNA pseudouridylate synthase
AL541_RS01535	PF01479	S4 domain
AL541_RS01540	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL541_RS01545	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS01545	PF02861	Clp amino terminal domain
AL541_RS01545	PF07724	AAA domain (Cdc48 subfamily)
AL541_RS01545	PF10431	C-terminal, D2-small domain, of ClpB protein
AL541_RS01590	PF08921	Domain of unknown function (DUF1904)
AL541_RS01595	PF03411	Penicillin-insensitive murein endopeptidase
AL541_RS01610	PF00037	4Fe-4S binding domain
AL541_RS01615	PF01136	AL541_RS01615
AL541_RS01615	PF16325	AL541_RS01615
AL541_RS01620	PF04381	Putative exonuclease, RdgC
AL541_RS01630	PF00072	Response regulator receiver domain
AL541_RS01630	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS01635	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS01635	PF00989	PAS fold
AL541_RS01635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS01635	PF11808	AL541_RS01635
AL541_RS01640	PF12849	PBP superfamily domain
AL541_RS01645	PF02541	Ppx/GppA phosphatase family
AL541_RS01650	PF02503	Polyphosphate kinase middle domain
AL541_RS01650	PF13089	Polyphosphate kinase N-terminal domain
AL541_RS01650	PF13090	Polyphosphate kinase C-terminal domain
AL541_RS01655	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS01660	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS01665	PF00005	ABC transporter
AL541_RS01670	PF01895	PhoU domain
AL541_RS01675	PF03976	Polyphosphate kinase 2 (PPK2)
AL541_RS01680	PF03932	CutC family
AL541_RS01685	PF00578	AhpC/TSA family
AL541_RS01685	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL541_RS01690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS01690	PF03466	LysR substrate binding domain
AL541_RS01695	PF01274	Malate synthase
AL541_RS01700	PF00463	Isocitrate lyase family
AL541_RS01705	PF00571	CBS domain
AL541_RS01710	PF00089	Trypsin
AL541_RS01715	PF02547	Queuosine biosynthesis protein
AL541_RS01720	PF01702	Queuine tRNA-ribosyltransferase
AL541_RS01725	PF02699	Preprotein translocase subunit
AL541_RS01730	PF02355	Protein export membrane protein
AL541_RS01730	PF07549	SecD/SecF GG Motif
AL541_RS01730	PF13721	SecD export protein N-terminal TM region
AL541_RS01735	PF02355	Protein export membrane protein
AL541_RS01735	PF07549	SecD/SecF GG Motif
AL541_RS01750	PF00459	Inositol monophosphatase family
AL541_RS01755	PF00588	SpoU rRNA Methylase family
AL541_RS01760	PF02082	Transcriptional regulator
AL541_RS01765	PF00266	Aminotransferase class-V
AL541_RS01770	PF01592	NifU-like N terminal domain
AL541_RS01775	PF01521	Iron-sulphur cluster biosynthesis
AL541_RS01780	PF00226	DnaJ domain
AL541_RS01780	PF07743	HSCB C-terminal oligomerisation domain
AL541_RS01785	PF00012	Hsp70 protein
AL541_RS01790	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL541_RS01795	PF04384	Iron-sulphur cluster assembly
AL541_RS01800	PF00883	Cytosol aminopeptidase family, catalytic domain
AL541_RS01800	PF12404	AL541_RS01800
AL541_RS01805	PF00334	Nucleoside diphosphate kinase
AL541_RS01810	PF04055	Radical SAM superfamily
AL541_RS01815	PF13413	Helix-turn-helix domain
AL541_RS01815	PF13464	AL541_RS01815
AL541_RS01820	PF04551	GcpE protein
AL541_RS01825	PF03129	Anticodon binding domain
AL541_RS01825	PF13393	Histidyl-tRNA synthetase
AL541_RS01830	PF09976	Tetratricopeptide repeat
AL541_RS01835	PF13360	PQQ-like domain
AL541_RS01840	PF01926	50S ribosome-binding GTPase
AL541_RS01840	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AL541_RS01850	PF07191	zinc-ribbons
AL541_RS01855	PF02601	AL541_RS01855
AL541_RS01855	PF13742	AL541_RS01855
AL541_RS01860	PF00478	IMP dehydrogenase / GMP reductase domain
AL541_RS01860	PF00571	CBS domain
AL541_RS01865	PF00117	Glutamine amidotransferase class-I
AL541_RS01865	PF00958	GMP synthase C terminal domain
AL541_RS01865	PF02540	NAD synthase
AL541_RS01870	PF03553	AL541_RS01870
AL541_RS01875	PF00182	Chitinase class I
AL541_RS01880	PF01184	AL541_RS01880
AL541_RS01885	PF01235	AL541_RS01885
AL541_RS01890	PF01266	FAD dependent oxidoreductase
AL541_RS01895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS01895	PF03466	LysR substrate binding domain
AL541_RS01900	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL541_RS01905	PF00202	Aminotransferase class-III
AL541_RS01910	PF05853	Prokaryotic protein of unknown function (DUF849)
AL541_RS01915	PF03553	AL541_RS01915
AL541_RS01920	PF09335	AL541_RS01920
AL541_RS01925	PF00583	Acetyltransferase (GNAT) family
AL541_RS01925	PF00795	Carbon-nitrogen hydrolase
AL541_RS01930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS01930	PF03466	LysR substrate binding domain
AL541_RS01935	PF13505	Outer membrane protein beta-barrel domain
AL541_RS01955	PF01668	SmpB protein
AL541_RS01960	PF03364	Polyketide cyclase / dehydrase and lipid transport
AL541_RS01965	PF03658	RnfH family Ubiquitin
AL541_RS01970	PF04355	SmpA / OmlA family
AL541_RS01975	PF00583	Acetyltransferase (GNAT) family
AL541_RS01980	PF02463	RecF/RecN/SMC N terminal domain
AL541_RS01985	PF11301	AL541_RS01985
AL541_RS01990	PF01513	ATP-NAD kinase
AL541_RS01995	PF01025	GrpE
AL541_RS02000	PF00375	Sodium:dicarboxylate symporter family
AL541_RS02005	PF00012	Hsp70 protein
AL541_RS02010	PF00226	DnaJ domain
AL541_RS02010	PF00684	DnaJ central domain
AL541_RS02010	PF01556	DnaJ C terminal domain
AL541_RS02015	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS02015	PF16732	AL541_RS02015
AL541_RS02020	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS02020	PF12019	Type II transport protein GspH
AL541_RS02035	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS02040	PF03806	AL541_RS02040
AL541_RS02045	PF14437	AL541_RS02045
AL541_RS02055	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS02055	PF01464	Transglycosylase SLT domain
AL541_RS02060	PF02769	AIR synthase related protein, C-terminal domain
AL541_RS02060	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AL541_RS02065	PF12286	AL541_RS02065
AL541_RS02075	PF00593	TonB dependent receptor
AL541_RS02075	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS02080	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL541_RS02085	PF11810	AL541_RS02085
AL541_RS02090	PF01546	Peptidase family M20/M25/M40
AL541_RS02090	PF07687	Peptidase dimerisation domain
AL541_RS02095	PF00860	Permease family
AL541_RS02100	PF00156	Phosphoribosyl transferase domain
AL541_RS02105	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
AL541_RS02110	PF07417	Transcriptional regulator Crl
AL541_RS02115	PF00696	Amino acid kinase family
AL541_RS02115	PF01472	PUA domain
AL541_RS02120	PF00171	Aldehyde dehydrogenase family
AL541_RS02125	PF03477	ATP cone domain
AL541_RS02130	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL541_RS02130	PF01872	RibD C-terminal domain
AL541_RS02135	PF00677	Lumazine binding domain
AL541_RS02140	PF00925	GTP cyclohydrolase II
AL541_RS02140	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL541_RS02145	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AL541_RS02150	PF01029	NusB family
AL541_RS02155	PF00586	AIR synthase related protein, N-terminal domain
AL541_RS02155	PF02769	AIR synthase related protein, C-terminal domain
AL541_RS02160	PF04608	Phosphatidylglycerophosphatase A
AL541_RS02165	PF02779	Transketolase, pyrimidine binding domain
AL541_RS02165	PF02780	Transketolase, C-terminal domain
AL541_RS02165	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL541_RS02170	PF00348	Polyprenyl synthetase
AL541_RS02175	PF02609	Exonuclease VII small subunit
AL541_RS02180	PF01618	AL541_RS02180
AL541_RS02185	PF00691	OmpA family
AL541_RS02185	PF13677	AL541_RS02185
AL541_RS02190	PF02568	Thiamine biosynthesis protein (ThiI)
AL541_RS02190	PF02926	THUMP domain
AL541_RS02195	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS02195	PF03466	LysR substrate binding domain
AL541_RS02200	PF12697	Alpha/beta hydrolase family
AL541_RS02205	PF04241	AL541_RS02205
AL541_RS02210	PF01728	FtsJ-like methyltransferase
AL541_RS02215	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL541_RS02215	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL541_RS02220	PF03641	Possible lysine decarboxylase
AL541_RS02220	PF11892	Domain of unknown function (DUF3412)
AL541_RS02220	PF14793	Domain of unknown function (DUF4478)
AL541_RS02225	PF00990	GGDEF domain
AL541_RS02235	PF14489	QueF-like protein
AL541_RS02235	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AL541_RS02240	PF07348	Syd protein (SUKH-2)
AL541_RS02245	PF10071	AL541_RS02245
AL541_RS02250	PF03180	NLPA lipoprotein
AL541_RS02255	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS02260	PF00005	ABC transporter
AL541_RS02260	PF09383	NIL domain
AL541_RS02265	PF13242	HAD-hyrolase-like
AL541_RS02270	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS02270	PF13377	Periplasmic binding protein-like domain
AL541_RS02275	PF00367	phosphotransferase system, EIIB
AL541_RS02275	PF02378	Phosphotransferase system, EIIC
AL541_RS02280	PF00128	Alpha amylase, catalytic domain
AL541_RS02280	PF16657	AL541_RS02280
AL541_RS02290	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS02295	PF02588	AL541_RS02295
AL541_RS02300	PF00464	Serine hydroxymethyltransferase
AL541_RS02305	PF04055	Radical SAM superfamily
AL541_RS02305	PF16881	AL541_RS02305
AL541_RS02310	PF03099	Biotin/lipoate A/B protein ligase family
AL541_RS02315	PF04359	Protein of unknown function (DUF493)
AL541_RS02320	PF00768	D-alanyl-D-alanine carboxypeptidase
AL541_RS02320	PF07943	Penicillin-binding protein 5, C-terminal domain
AL541_RS02325	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AL541_RS02325	PF05036	Sporulation related domain
AL541_RS02330	PF01098	AL541_RS02330
AL541_RS02335	PF00905	Penicillin binding protein transpeptidase domain
AL541_RS02335	PF03717	Penicillin-binding Protein dimerisation domain
AL541_RS02340	PF02590	Predicted SPOUT methyltransferase
AL541_RS02345	PF02410	Oligomerisation domain
AL541_RS02350	PF06144	DNA polymerase III, delta subunit
AL541_RS02350	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
AL541_RS02355	PF04390	Lipopolysaccharide-assembly
AL541_RS02360	PF00133	tRNA synthetases class I (I, L, M and V)
AL541_RS02360	PF08264	Anticodon-binding domain of tRNA
AL541_RS02360	PF13603	Leucyl-tRNA synthetase, Domain 2
AL541_RS02365	PF07295	AL541_RS02365
AL541_RS02370	PF00795	Carbon-nitrogen hydrolase
AL541_RS02375	PF00571	CBS domain
AL541_RS02375	PF03471	Transporter associated domain
AL541_RS02380	PF02130	Uncharacterized protein family UPF0054
AL541_RS02385	PF02562	PhoH-like protein
AL541_RS02390	PF00919	Uncharacterized protein family UPF0004
AL541_RS02390	PF01938	TRAM domain
AL541_RS02390	PF04055	Radical SAM superfamily
AL541_RS02400	PF01494	FAD binding domain
AL541_RS02510	PF01926	50S ribosome-binding GTPase
AL541_RS02510	PF06071	Protein of unknown function (DUF933)
AL541_RS02515	PF01195	Peptidyl-tRNA hydrolase
AL541_RS02520	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL541_RS02520	PF14572	Phosphoribosyl synthetase-associated domain
AL541_RS02525	PF00288	GHMP kinases N terminal domain
AL541_RS02525	PF08544	GHMP kinases C terminal
AL541_RS02530	PF03550	Outer membrane lipoprotein LolB
AL541_RS02535	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AL541_RS02535	PF01488	Shikimate / quinate 5-dehydrogenase
AL541_RS02535	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AL541_RS02540	PF00472	RF-1 domain
AL541_RS02540	PF03462	PCRF domain
AL541_RS02545	PF13847	Methyltransferase domain
AL541_RS02550	PF04247	AL541_RS02550
AL541_RS02555	PF13369	AL541_RS02555
AL541_RS02555	PF13371	Tetratricopeptide repeat
AL541_RS02560	PF00793	DAHP synthetase I family
AL541_RS02565	PF00149	Calcineurin-like phosphoesterase
AL541_RS02565	PF02872	5'-nucleotidase, C-terminal domain
AL541_RS02570	PF04073	Aminoacyl-tRNA editing domain
AL541_RS02575	PF00849	RNA pseudouridylate synthase
AL541_RS02575	PF01479	S4 domain
AL541_RS02580	PF01713	Smr domain
AL541_RS02585	PF11346	AL541_RS02585
AL541_RS02600	PF01963	AL541_RS02600
AL541_RS02605	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL541_RS02605	PF02838	Glycosyl hydrolase family 20, domain 2
AL541_RS02605	PF03173	Putative carbohydrate binding domain
AL541_RS02605	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL541_RS02610	PF06178	Oligogalacturonate-specific porin protein (KdgM)
AL541_RS02615	PF04214	AL541_RS02615
AL541_RS02620	PF00122	E1-E2 ATPase
AL541_RS02620	PF00403	Heavy-metal-associated domain
AL541_RS02620	PF00702	haloacid dehalogenase-like hydrolase
AL541_RS02630	PF13609	Gram-negative porin
AL541_RS02635	PF09829	AL541_RS02635
AL541_RS02640	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL541_RS02645	PF00691	OmpA family
AL541_RS02645	PF01389	OmpA-like transmembrane domain
AL541_RS02660	PF16538	AL541_RS02660
AL541_RS02660	PF16539	AL541_RS02660
AL541_RS02660	PF16548	AL541_RS02660
AL541_RS02670	PF02169	LPP20 lipoprotein
AL541_RS02675	PF05130	FlgN protein
AL541_RS02680	PF04316	Anti-sigma-28 factor, FlgM
AL541_RS02685	PF13144	SAF-like
AL541_RS02690	PF00072	Response regulator receiver domain
AL541_RS02690	PF01584	CheW-like domain
AL541_RS02695	PF01739	CheR methyltransferase, SAM binding domain
AL541_RS02695	PF03705	CheR methyltransferase, all-alpha domain
AL541_RS02705	PF00460	Flagella basal body rod protein
AL541_RS02705	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS02710	PF03963	AL541_RS02710
AL541_RS02710	PF13860	FlgD Ig-like domain
AL541_RS02710	PF13861	FlgD Tudor-like domain
AL541_RS02715	PF00460	Flagella basal body rod protein
AL541_RS02715	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS02715	PF07559	Flagellar basal body protein FlaE
AL541_RS02720	PF00460	Flagella basal body rod protein
AL541_RS02720	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS02725	PF00460	Flagella basal body rod protein
AL541_RS02725	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS02730	PF02107	AL541_RS02730
AL541_RS02735	PF02119	AL541_RS02735
AL541_RS02740	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL541_RS02740	PF10135	AL541_RS02740
AL541_RS02745	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS02750	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS02755	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS02755	PF00700	Bacterial flagellin C-terminal helical region
AL541_RS02755	PF07196	Flagellin hook IN motif
AL541_RS02765	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS02765	PF00700	Bacterial flagellin C-terminal helical region
AL541_RS02765	PF07196	Flagellin hook IN motif
AL541_RS02780	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AL541_RS02785	PF00391	PEP-utilising enzyme, mobile domain
AL541_RS02785	PF02896	PEP-utilising enzyme, TIM barrel domain
AL541_RS02785	PF05524	PEP-utilising enzyme, N-terminal
AL541_RS02790	PF00381	PTS HPr component phosphorylation site
AL541_RS02800	PF00291	Pyridoxal-phosphate dependent enzyme
AL541_RS02805	PF07264	Etoposide-induced protein 2
AL541_RS02810	PF04354	ZipA, C-terminal FtsZ-binding domain
AL541_RS02815	PF00533	BRCA1 C Terminus (BRCT) domain
AL541_RS02815	PF01653	NAD-dependent DNA ligase adenylation domain
AL541_RS02815	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AL541_RS02815	PF03120	NAD-dependent DNA ligase OB-fold domain
AL541_RS02815	PF12826	Helix-hairpin-helix motif
AL541_RS02815	PF14520	Helix-hairpin-helix domain
AL541_RS02835	PF01957	NfeD-like C-terminal, partner-binding
AL541_RS02840	PF01145	SPFH domain / Band 7 family
AL541_RS02840	PF16200	AL541_RS02840
AL541_RS02845	PF00085	Thioredoxin
AL541_RS02845	PF14559	Tetratricopeptide repeat
AL541_RS02845	PF14561	Tetratricopeptide repeat
AL541_RS02855	PF00106	short chain dehydrogenase
AL541_RS02860	PF01370	NAD dependent epimerase/dehydratase family
AL541_RS02860	PF08338	Domain of unknown function (DUF1731)
AL541_RS02865	PF07556	AL541_RS02865
AL541_RS02870	PF07556	AL541_RS02870
AL541_RS02880	PF00571	CBS domain
AL541_RS02890	PF12850	Calcineurin-like phosphoesterase superfamily domain
AL541_RS02895	PF10262	Rdx family
AL541_RS02900	PF01925	AL541_RS02900
AL541_RS02905	PF17323	AL541_RS02905
AL541_RS02910	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS02915	PF00183	Hsp90 protein
AL541_RS02915	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS02920	PF00406	Adenylate kinase
AL541_RS02920	PF05191	Adenylate kinase, active site lid
AL541_RS02925	PF00762	Ferrochelatase
AL541_RS02930	PF00854	POT family
AL541_RS02935	PF02357	Transcription termination factor nusG
AL541_RS02940	PF00733	Asparagine synthase
AL541_RS02940	PF13537	Glutamine amidotransferase domain
AL541_RS02945	PF00999	Sodium/hydrogen exchanger family
AL541_RS02945	PF02254	TrkA-N domain
AL541_RS02950	PF00480	ROK family
AL541_RS02955	PF01979	Amidohydrolase family
AL541_RS02965	PF00367	phosphotransferase system, EIIB
AL541_RS02965	PF02378	Phosphotransferase system, EIIC
AL541_RS02970	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL541_RS02970	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AL541_RS02975	PF01475	Ferric uptake regulator family
AL541_RS02980	PF14539	Domain of unknown function (DUF4442)
AL541_RS02985	PF00258	Flavodoxin
AL541_RS02990	PF10981	AL541_RS02990
AL541_RS02995	PF12697	Alpha/beta hydrolase family
AL541_RS03000	PF03925	SeqA protein
AL541_RS03000	PF17206	AL541_RS03000
AL541_RS03005	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL541_RS03005	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL541_RS03005	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL541_RS03005	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL541_RS03010	PF08907	AL541_RS03010
AL541_RS03015	PF01784	NIF3 (NGG1p interacting factor 3)
AL541_RS03020	PF00285	Citrate synthase
AL541_RS03025	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL541_RS03035	PF00890	FAD binding domain
AL541_RS03035	PF02910	Fumarate reductase flavoprotein C-term
AL541_RS03040	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL541_RS03040	PF13534	4Fe-4S dicluster domain
AL541_RS03045	PF00676	Dehydrogenase E1 component
AL541_RS03045	PF02779	Transketolase, pyrimidine binding domain
AL541_RS03045	PF16078	AL541_RS03045
AL541_RS03045	PF16870	AL541_RS03045
AL541_RS03050	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL541_RS03050	PF00364	Biotin-requiring enzyme
AL541_RS03050	PF02817	e3 binding domain
AL541_RS03055	PF00549	CoA-ligase
AL541_RS03055	PF08442	ATP-grasp domain
AL541_RS03060	PF00549	CoA-ligase
AL541_RS03060	PF02629	CoA binding domain
AL541_RS03065	PF00950	AL541_RS03065
AL541_RS03070	PF00005	ABC transporter
AL541_RS03075	PF01297	Periplasmic solute binding protein family
AL541_RS03080	PF12833	Helix-turn-helix domain
AL541_RS03085	PF04023	FeoA domain
AL541_RS03090	PF02421	Ferrous iron transport protein B
AL541_RS03090	PF07664	AL541_RS03090
AL541_RS03090	PF07670	Nucleoside recognition
AL541_RS03095	PF09012	FeoC like transcriptional regulator
AL541_RS03100	PF03350	AL541_RS03100
AL541_RS03105	PF01230	HIT domain
AL541_RS03110	PF00750	tRNA synthetases class I (R)
AL541_RS03110	PF03485	Arginyl tRNA synthetase N terminal domain
AL541_RS03110	PF05746	DALR anticodon binding domain
AL541_RS03120	PF06185	YecM protein
AL541_RS03125	PF00551	Formyl transferase
AL541_RS03125	PF01842	ACT domain
AL541_RS03130	PF04851	Type III restriction enzyme, res subunit
AL541_RS03130	PF13307	Helicase C-terminal domain
AL541_RS03135	PF00814	Glycoprotease family
AL541_RS03145	PF03843	AL541_RS03145
AL541_RS03150	PF00561	alpha/beta hydrolase fold
AL541_RS03155	PF00501	AMP-binding enzyme
AL541_RS03155	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS03160	PF00570	HRDC domain
AL541_RS03160	PF01612	3'-5' exonuclease
AL541_RS03165	PF03776	Septum formation topological specificity factor MinE
AL541_RS03170	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL541_RS03175	PF03775	Septum formation inhibitor MinC, C-terminal domain
AL541_RS03175	PF05209	Septum formation inhibitor MinC, N-terminal domain
AL541_RS03180	PF05166	YcgL domain
AL541_RS03185	PF13406	Transglycosylase SLT domain
AL541_RS03190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS03190	PF03466	LysR substrate binding domain
AL541_RS03195	PF01773	Na+ dependent nucleoside transporter N-terminus
AL541_RS03195	PF07662	Na+ dependent nucleoside transporter C-terminus
AL541_RS03195	PF07670	Nucleoside recognition
AL541_RS03200	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AL541_RS03200	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AL541_RS03210	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL541_RS03210	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL541_RS03215	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS03220	PF07977	FabA-like domain
AL541_RS03225	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL541_RS03225	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL541_RS03230	PF11659	AL541_RS03230
AL541_RS03235	PF03176	MMPL family
AL541_RS03240	PF03548	Outer membrane lipoprotein carrier protein LolA
AL541_RS03245	PF13279	Thioesterase-like superfamily
AL541_RS03250	PF00221	Aromatic amino acid lyase
AL541_RS03255	PF00535	Glycosyl transferase family 2
AL541_RS03255	PF03279	AL541_RS03255
AL541_RS03265	PF00501	AMP-binding enzyme
AL541_RS03265	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS03270	PF04279	AL541_RS03270
AL541_RS03275	PF00550	Phosphopantetheine attachment site
AL541_RS03280	PF00550	Phosphopantetheine attachment site
AL541_RS03285	PF01553	Acyltransferase
AL541_RS03290	PF13723	AL541_RS03290
AL541_RS03300	PF00891	O-methyltransferase
AL541_RS03305	PF01494	FAD binding domain
AL541_RS03310	PF01464	Transglycosylase SLT domain
AL541_RS03315	PF00270	DEAD/DEAH box helicase
AL541_RS03315	PF00271	Helicase conserved C-terminal domain
AL541_RS03320	PF02080	TrkA-C domain
AL541_RS03320	PF02254	TrkA-N domain
AL541_RS03325	PF02386	Cation transport protein
AL541_RS03330	PF05547	AL541_RS03330
AL541_RS03340	PF02696	AL541_RS03340
AL541_RS03345	PF03480	Bacterial extracellular solute-binding protein, family 7
AL541_RS03350	PF04290	AL541_RS03350
AL541_RS03355	PF06808	AL541_RS03355
AL541_RS03365	PF00072	Response regulator receiver domain
AL541_RS03365	PF00158	Sigma-54 interaction domain
AL541_RS03365	PF02954	Bacterial regulatory protein, Fis family
AL541_RS03370	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS03370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS03380	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL541_RS03380	PF05697	Bacterial trigger factor protein (TF)
AL541_RS03380	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL541_RS03385	PF00574	Clp protease
AL541_RS03390	PF06689	ClpX C4-type zinc finger
AL541_RS03390	PF07724	AAA domain (Cdc48 subfamily)
AL541_RS03390	PF10431	C-terminal, D2-small domain, of ClpB protein
AL541_RS03395	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS03395	PF02190	ATP-dependent protease La (LON) domain
AL541_RS03395	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL541_RS03400	PF00216	Bacterial DNA-binding protein
AL541_RS03405	PF13616	PPIC-type PPIASE domain
AL541_RS03405	PF13624	SurA N-terminal domain
AL541_RS03410	PF12836	Helix-hairpin-helix motif
AL541_RS03415	PF01694	Rhomboid family
AL541_RS03420	PF03942	AL541_RS03420
AL541_RS03425	PF01966	HD domain
AL541_RS03425	PF13286	Phosphohydrolase-associated domain
AL541_RS03430	PF13023	HD domain
AL541_RS03435	PF00155	Aminotransferase class I and II
AL541_RS03440	PF00425	chorismate binding enzyme
AL541_RS03445	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL541_RS03445	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL541_RS03445	PF16582	AL541_RS03445
AL541_RS03450	PF12697	Alpha/beta hydrolase family
AL541_RS03455	PF00378	Enoyl-CoA hydratase/isomerase family
AL541_RS03460	PF13378	Enolase C-terminal domain-like
AL541_RS03465	PF00501	AMP-binding enzyme
AL541_RS03465	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS03475	PF03601	AL541_RS03475
AL541_RS03480	PF01553	Acyltransferase
AL541_RS03480	PF07690	Major Facilitator Superfamily
AL541_RS03485	PF13305	WHG domain
AL541_RS03490	PF04280	Tim44-like domain
AL541_RS03525	PF16576	AL541_RS03525
AL541_RS03530	PF00873	AcrB/AcrD/AcrF family
AL541_RS03535	PF13505	Outer membrane protein beta-barrel domain
AL541_RS03540	PF06844	Protein of unknown function (DUF1244)
AL541_RS03545	PF00291	Pyridoxal-phosphate dependent enzyme
AL541_RS03550	PF01037	AsnC family
AL541_RS03550	PF13412	Winged helix-turn-helix DNA-binding
AL541_RS03560	PF13622	Thioesterase-like superfamily
AL541_RS03565	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL541_RS03570	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL541_RS03580	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS03580	PF00990	GGDEF domain
AL541_RS03590	PF00588	SpoU rRNA Methylase family
AL541_RS03595	PF00571	CBS domain
AL541_RS03600	PF00122	E1-E2 ATPase
AL541_RS03600	PF00403	Heavy-metal-associated domain
AL541_RS03600	PF00702	haloacid dehalogenase-like hydrolase
AL541_RS03605	PF01048	Phosphorylase superfamily
AL541_RS03610	PF09002	Domain of unknown function (DUF1887)
AL541_RS03615	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS03620	PF01230	HIT domain
AL541_RS03630	PF07233	Protein of unknown function (DUF1425)
AL541_RS03635	PF13036	Protein of unknown function (DUF3897)
AL541_RS03640	PF01636	Phosphotransferase enzyme family
AL541_RS03645	PF05728	Uncharacterised protein family (UPF0227)
AL541_RS03650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS03655	PF13302	Acetyltransferase (GNAT) domain
AL541_RS03660	PF10972	AL541_RS03660
AL541_RS03665	PF00270	DEAD/DEAH box helicase
AL541_RS03665	PF00271	Helicase conserved C-terminal domain
AL541_RS03665	PF02559	CarD-like/TRCF domain
AL541_RS03665	PF03461	TRCF domain
AL541_RS03675	PF02687	AL541_RS03675
AL541_RS03675	PF12704	MacB-like periplasmic core domain
AL541_RS03680	PF00005	ABC transporter
AL541_RS03685	PF02687	AL541_RS03685
AL541_RS03685	PF12704	MacB-like periplasmic core domain
AL541_RS03690	PF09835	AL541_RS03690
AL541_RS03695	PF00753	Metallo-beta-lactamase superfamily
AL541_RS03695	PF03772	AL541_RS03695
AL541_RS03700	PF01501	Glycosyl transferase family 8
AL541_RS03705	PF00005	ABC transporter
AL541_RS03705	PF00664	ABC transporter transmembrane region
AL541_RS03710	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AL541_RS03715	PF03966	Trm112p-like protein
AL541_RS03720	PF02348	Cytidylyltransferase
AL541_RS03725	PF04293	AL541_RS03725
AL541_RS03730	PF04285	AL541_RS03730
AL541_RS03735	PF06798	AL541_RS03735
AL541_RS03735	PF08298	PrkA AAA domain
AL541_RS03745	PF03887	YfbU domain
AL541_RS03750	PF01891	Cobalt uptake substrate-specific transmembrane region
AL541_RS03755	PF04055	Radical SAM superfamily
AL541_RS03755	PF13353	4Fe-4S single cluster domain
AL541_RS03760	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
AL541_RS03765	PF01228	Glycine radical
AL541_RS03765	PF02901	Pyruvate formate lyase
AL541_RS03770	PF11840	AL541_RS03770
AL541_RS03785	PF00005	ABC transporter
AL541_RS03790	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS03795	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS03800	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS03805	PF17291	AL541_RS03805
AL541_RS03810	PF03372	Endonuclease/Exonuclease/phosphatase family
AL541_RS03815	PF10689	AL541_RS03815
AL541_RS03820	PF07445	Primosomal replication protein priB and priC
AL541_RS03825	PF01925	AL541_RS03825
AL541_RS03830	PF04851	Type III restriction enzyme, res subunit
AL541_RS03830	PF13307	Helicase C-terminal domain
AL541_RS03835	PF13609	Gram-negative porin
AL541_RS03840	PF09829	AL541_RS03840
AL541_RS03845	PF00849	RNA pseudouridylate synthase
AL541_RS03850	PF03971	Monomeric isocitrate dehydrogenase
AL541_RS03855	PF00313	'Cold-shock' DNA-binding domain
AL541_RS03860	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AL541_RS03865	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS03865	PF02861	Clp amino terminal domain
AL541_RS03865	PF07724	AAA domain (Cdc48 subfamily)
AL541_RS03865	PF10431	C-terminal, D2-small domain, of ClpB protein
AL541_RS03870	PF01176	Translation initiation factor 1A / IF-1
AL541_RS03875	PF04376	AL541_RS03875
AL541_RS03875	PF04377	AL541_RS03875
AL541_RS03880	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AL541_RS03885	PF05433	AL541_RS03885
AL541_RS03890	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL541_RS03895	PF10692	Protein of unknown function (DUF2498)
AL541_RS03900	PF01131	DNA topoisomerase
AL541_RS03900	PF01396	AL541_RS03900
AL541_RS03900	PF01751	Toprim domain
AL541_RS03900	PF08272	Topoisomerase I zinc-ribbon-like
AL541_RS03905	PF00483	Nucleotidyl transferase
AL541_RS03910	PF00534	Glycosyl transferases group 1
AL541_RS03910	PF08323	Starch synthase catalytic domain
AL541_RS03915	PF00561	alpha/beta hydrolase fold
AL541_RS03920	PF09413	Domain of unknown function (DUF2007)
AL541_RS03925	PF09335	AL541_RS03925
AL541_RS03930	PF04993	TfoX N-terminal domain
AL541_RS03930	PF04994	TfoX C-terminal domain
AL541_RS03935	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS03935	PF13377	Periplasmic binding protein-like domain
AL541_RS03940	PF02613	Nitrate reductase delta subunit
AL541_RS03945	PF00072	Response regulator receiver domain
AL541_RS03945	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS03950	PF02698	DUF218 domain
AL541_RS03955	PF08241	Methyltransferase domain
AL541_RS03960	PF03882	KicB killing factor
AL541_RS03960	PF17192	AL541_RS03960
AL541_RS03960	PF17193	AL541_RS03960
AL541_RS03965	PF04288	MukE-like family
AL541_RS03970	PF04310	MukB N-terminal
AL541_RS03970	PF13558	Putative exonuclease SbcCD, C subunit
AL541_RS03970	PF16330	AL541_RS03970
AL541_RS03980	PF14397	AL541_RS03980
AL541_RS03985	PF14400	AL541_RS03985
AL541_RS03985	PF14402	AL541_RS03985
AL541_RS03990	PF05618	Putative ATP-dependant zinc protease
AL541_RS04000	PF08003	Protein of unknown function (DUF1698)
AL541_RS04005	PF13649	Methyltransferase domain
AL541_RS04010	PF01904	Protein of unknown function DUF72
AL541_RS04015	PF00152	tRNA synthetases class II (D, K and N)
AL541_RS04015	PF01336	OB-fold nucleic acid binding domain
AL541_RS04015	PF02938	GAD domain
AL541_RS04020	PF01709	Transcriptional regulator
AL541_RS04025	PF02075	Crossover junction endodeoxyribonuclease RuvC
AL541_RS04030	PF01330	RuvA N terminal domain
AL541_RS04030	PF07499	RuvA, C-terminal domain
AL541_RS04030	PF14520	Helix-hairpin-helix domain
AL541_RS04035	PF05491	Holliday junction DNA helicase ruvB C-terminus
AL541_RS04035	PF05496	Holliday junction DNA helicase ruvB N-terminus
AL541_RS04040	PF01654	AL541_RS04040
AL541_RS04045	PF02322	AL541_RS04045
AL541_RS04050	PF08173	AL541_RS04050
AL541_RS04055	PF09600	AL541_RS04055
AL541_RS04060	PF03061	Thioesterase superfamily
AL541_RS04065	PF01618	AL541_RS04065
AL541_RS04070	PF02472	Biopolymer transport protein ExbD/TolR
AL541_RS04075	PF06519	TolA C-terminal
AL541_RS04080	PF04052	TolB amino-terminal domain
AL541_RS04080	PF07676	WD40-like Beta Propeller Repeat
AL541_RS04085	PF00691	OmpA family
AL541_RS04090	PF13174	Tetratricopeptide repeat
AL541_RS04090	PF13432	Tetratricopeptide repeat
AL541_RS04090	PF16331	AL541_RS04090
AL541_RS04095	PF02445	Quinolinate synthetase A protein
AL541_RS04100	PF07885	Ion channel
AL541_RS04105	PF03994	AL541_RS04105
AL541_RS04110	PF06693	AL541_RS04110
AL541_RS04115	PF03738	Glutathionylspermidine synthase preATP-grasp
AL541_RS04120	PF03695	Uncharacterised protein family (UPF0149)
AL541_RS04125	PF00072	Response regulator receiver domain
AL541_RS04125	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS04125	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS04130	PF06610	AL541_RS04130
AL541_RS04140	PF02322	AL541_RS04140
AL541_RS04145	PF01654	AL541_RS04145
AL541_RS04155	PF11557	AL541_RS04155
AL541_RS04160	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS04160	PF00672	HAMP domain
AL541_RS04165	PF16576	AL541_RS04165
AL541_RS04170	PF00873	AcrB/AcrD/AcrF family
AL541_RS04175	PF01047	MarR family
AL541_RS04180	PF03547	AL541_RS04180
AL541_RS04185	PF00579	tRNA synthetases class I (W and Y)
AL541_RS04195	PF03372	Endonuclease/Exonuclease/phosphatase family
AL541_RS04205	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS04205	PF12729	AL541_RS04205
AL541_RS04210	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AL541_RS04220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS04220	PF03466	LysR substrate binding domain
AL541_RS04225	PF13679	AL541_RS04225
AL541_RS04230	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL541_RS04230	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL541_RS04235	PF01037	AsnC family
AL541_RS04235	PF13412	Winged helix-turn-helix DNA-binding
AL541_RS04240	PF01580	FtsK/SpoIIIE family
AL541_RS04240	PF09397	Ftsk gamma domain
AL541_RS04240	PF13491	AL541_RS04240
AL541_RS04245	PF03548	Outer membrane lipoprotein carrier protein LolA
AL541_RS04250	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS04250	PF12002	MgsA AAA+ ATPase C terminal
AL541_RS04250	PF16193	AL541_RS04250
AL541_RS04255	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL541_RS04255	PF02403	Seryl-tRNA synthetase N-terminal domain
AL541_RS04270	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL541_RS04275	PF00202	Aminotransferase class-III
AL541_RS04280	PF04055	Radical SAM superfamily
AL541_RS04280	PF06968	Biotin and Thiamin Synthesis associated domain
AL541_RS04285	PF00155	Aminotransferase class I and II
AL541_RS04290	PF08241	Methyltransferase domain
AL541_RS04295	PF13500	AAA domain
AL541_RS04305	PF01435	Peptidase family M48
AL541_RS04310	PF12680	SnoaL-like domain
AL541_RS04315	PF00106	short chain dehydrogenase
AL541_RS04320	PF01593	Flavin containing amine oxidoreductase
AL541_RS04325	PF07103	AL541_RS04325
AL541_RS04330	PF02353	Mycolic acid cyclopropane synthetase
AL541_RS04335	PF11086	AL541_RS04335
AL541_RS04340	PF16036	AL541_RS04340
AL541_RS04345	PF12915	AL541_RS04345
AL541_RS04350	PF00206	Lyase
AL541_RS04350	PF08328	Adenylosuccinate lyase C-terminal
AL541_RS04355	PF04356	Protein of unknown function (DUF489)
AL541_RS04360	PF03054	tRNA methyl transferase
AL541_RS04370	PF00294	pfkB family carbohydrate kinase
AL541_RS04375	PF00816	H-NS histone family
AL541_RS04380	PF03553	AL541_RS04380
AL541_RS04385	PF01634	ATP phosphoribosyltransferase
AL541_RS04385	PF08029	HisG, C-terminal domain
AL541_RS04390	PF00815	Histidinol dehydrogenase
AL541_RS04395	PF00155	Aminotransferase class I and II
AL541_RS04400	PF00475	Imidazoleglycerol-phosphate dehydratase
AL541_RS04400	PF08645	Polynucleotide kinase 3 phosphatase
AL541_RS04405	PF00117	Glutamine amidotransferase class-I
AL541_RS04410	PF00977	Histidine biosynthesis protein
AL541_RS04415	PF00977	Histidine biosynthesis protein
AL541_RS04420	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL541_RS04420	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL541_RS04425	PF02810	SEC-C motif
AL541_RS04430	PF00563	EAL domain
AL541_RS04430	PF08668	HDOD domain
AL541_RS04435	PF12850	Calcineurin-like phosphoesterase superfamily domain
AL541_RS04440	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL541_RS04445	PF01406	tRNA synthetases class I (C) catalytic domain
AL541_RS04445	PF09190	DALR domain
AL541_RS04450	PF00265	Thymidine kinase
AL541_RS04455	PF02698	DUF218 domain
AL541_RS04460	PF01370	NAD dependent epimerase/dehydratase family
AL541_RS04465	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS04465	PF03466	LysR substrate binding domain
AL541_RS04470	PF05232	AL541_RS04470
AL541_RS04475	PF06146	AL541_RS04475
AL541_RS04480	PF01226	Formate/nitrite transporter
AL541_RS04490	PF03649	AL541_RS04490
AL541_RS04495	PF06796	AL541_RS04495
AL541_RS04500	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL541_RS04505	PF00384	Molybdopterin oxidoreductase
AL541_RS04505	PF01568	Molydopterin dinucleotide binding domain
AL541_RS04510	PF02065	Melibiase
AL541_RS04515	PF11449	AL541_RS04515
AL541_RS04520	PF01368	DHH family
AL541_RS04520	PF02833	DHHA2 domain
AL541_RS04525	PF11042	AL541_RS04525
AL541_RS04530	PF00005	ABC transporter
AL541_RS04535	PF00005	ABC transporter
AL541_RS04535	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS04540	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS04540	PF12911	AL541_RS04540
AL541_RS04545	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS04550	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS04555	PF00158	Sigma-54 interaction domain
AL541_RS04555	PF02954	Bacterial regulatory protein, Fis family
AL541_RS04560	PF04012	AL541_RS04560
AL541_RS04565	PF06667	AL541_RS04565
AL541_RS04570	PF04024	AL541_RS04570
AL541_RS04575	PF16576	AL541_RS04575
AL541_RS04580	PF13437	HlyD family secretion protein
AL541_RS04580	PF13533	Biotin-lipoyl like
AL541_RS04585	PF00873	AcrB/AcrD/AcrF family
AL541_RS04590	PF03352	Methyladenine glycosylase
AL541_RS04595	PF03280	Proteobacterial lipase chaperone protein
AL541_RS04600	PF00561	alpha/beta hydrolase fold
AL541_RS04605	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL541_RS04610	PF13091	PLD-like domain
AL541_RS04610	PF13396	AL541_RS04610
AL541_RS04615	PF00209	Sodium:neurotransmitter symporter family
AL541_RS04620	PF00849	RNA pseudouridylate synthase
AL541_RS04625	PF10672	S-adenosylmethionine-dependent methyltransferase
AL541_RS04630	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL541_RS04630	PF00175	Oxidoreductase NAD-binding domain
AL541_RS04630	PF00970	Oxidoreductase FAD-binding domain
AL541_RS04635	PF03063	Prismane/CO dehydrogenase family
AL541_RS04640	PF00158	Sigma-54 interaction domain
AL541_RS04640	PF02954	Bacterial regulatory protein, Fis family
AL541_RS04650	PF05433	AL541_RS04650
AL541_RS04655	PF01066	CDP-alcohol phosphatidyltransferase
AL541_RS04660	PF00005	ABC transporter
AL541_RS04670	PF13416	Bacterial extracellular solute-binding protein
AL541_RS04675	PF03724	META domain
AL541_RS04680	PF06945	AL541_RS04680
AL541_RS04695	PF00149	Calcineurin-like phosphoesterase
AL541_RS04695	PF02872	5'-nucleotidase, C-terminal domain
AL541_RS04700	PF00583	Acetyltransferase (GNAT) family
AL541_RS04705	PF01386	Ribosomal L25p family
AL541_RS04710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS04715	PF00072	Response regulator receiver domain
AL541_RS04715	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS04725	PF00271	Helicase conserved C-terminal domain
AL541_RS04725	PF04851	Type III restriction enzyme, res subunit
AL541_RS04730	PF00849	RNA pseudouridylate synthase
AL541_RS04730	PF01479	S4 domain
AL541_RS04740	PF07690	Major Facilitator Superfamily
AL541_RS04745	PF11140	AL541_RS04745
AL541_RS04750	PF11066	AL541_RS04750
AL541_RS04750	PF13460	NADH(P)-binding
AL541_RS04755	PF01554	MatE
AL541_RS04760	PF00005	ABC transporter
AL541_RS04765	PF02687	AL541_RS04765
AL541_RS04770	PF07143	Hydroxyneurosporene synthase (CrtC)
AL541_RS04770	PF17186	AL541_RS04770
AL541_RS04775	PF06965	Na+/H+ antiporter 1
AL541_RS04785	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS04790	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL541_RS04790	PF02770	Acyl-CoA dehydrogenase, middle domain
AL541_RS04790	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL541_RS04790	PF09317	AL541_RS04790
AL541_RS04795	PF07055	Enoyl reductase FAD binding domain
AL541_RS04795	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL541_RS04795	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL541_RS04800	PF02080	TrkA-C domain
AL541_RS04800	PF06826	AL541_RS04800
AL541_RS04805	PF00462	Glutaredoxin
AL541_RS04810	PF00465	Iron-containing alcohol dehydrogenase
AL541_RS04815	PF01380	SIS domain
AL541_RS04815	PF01418	Helix-turn-helix domain, rpiR family
AL541_RS04820	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL541_RS04830	PF03956	AL541_RS04830
AL541_RS04835	PF08668	HDOD domain
AL541_RS04850	PF04993	TfoX N-terminal domain
AL541_RS04850	PF04994	TfoX C-terminal domain
AL541_RS04860	PF00072	Response regulator receiver domain
AL541_RS04865	PF00027	Cyclic nucleotide-binding domain
AL541_RS04865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS04870	PF06097	AL541_RS04870
AL541_RS04875	PF00266	Aminotransferase class-V
AL541_RS04880	PF00291	Pyridoxal-phosphate dependent enzyme
AL541_RS04885	PF00005	ABC transporter
AL541_RS04885	PF00664	ABC transporter transmembrane region
AL541_RS04890	PF00005	ABC transporter
AL541_RS04890	PF00664	ABC transporter transmembrane region
AL541_RS04895	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS04900	PF10014	2OG-Fe dioxygenase
AL541_RS04905	PF00266	Aminotransferase class-V
AL541_RS04910	PF10977	AL541_RS04910
AL541_RS04915	PF00990	GGDEF domain
AL541_RS04915	PF08547	Complex I intermediate-associated protein 30 (CIA30)
AL541_RS04920	PF00939	Sodium:sulfate symporter transmembrane region
AL541_RS04925	PF02698	DUF218 domain
AL541_RS04930	PF00390	Malic enzyme, N-terminal domain
AL541_RS04930	PF03949	Malic enzyme, NAD binding domain
AL541_RS04935	PF00270	DEAD/DEAH box helicase
AL541_RS04935	PF00271	Helicase conserved C-terminal domain
AL541_RS04935	PF04408	Helicase associated domain (HA2)
AL541_RS04945	PF01797	Transposase IS200 like
AL541_RS04950	PF09423	PhoD-like phosphatase
AL541_RS04950	PF16655	AL541_RS04950
AL541_RS04955	PF01259	SAICAR synthetase
AL541_RS04960	PF03846	Cell division inhibitor SulA
AL541_RS04975	PF00691	OmpA family
AL541_RS04975	PF13488	AL541_RS04975
AL541_RS04980	PF10979	AL541_RS04980
AL541_RS04985	PF11813	AL541_RS04985
AL541_RS04990	PF01565	FAD binding domain
AL541_RS04990	PF02913	FAD linked oxidases, C-terminal domain
AL541_RS04990	PF13183	4Fe-4S dicluster domain
AL541_RS04995	PF04191	Phospholipid methyltransferase
AL541_RS05000	PF12119	AL541_RS05000
AL541_RS05005	PF00221	Aromatic amino acid lyase
AL541_RS05010	PF01175	Urocanase
AL541_RS05010	PF17391	AL541_RS05010
AL541_RS05010	PF17392	AL541_RS05010
AL541_RS05015	PF00491	Arginase family
AL541_RS05020	PF01979	Amidohydrolase family
AL541_RS05025	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS05025	PF07702	UTRA domain
AL541_RS05030	PF07070	AL541_RS05030
AL541_RS05035	PF11383	AL541_RS05035
AL541_RS05040	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL541_RS05040	PF02824	TGS domain
AL541_RS05040	PF03129	Anticodon binding domain
AL541_RS05040	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL541_RS05045	PF00707	Translation initiation factor IF-3, C-terminal domain
AL541_RS05045	PF05198	Translation initiation factor IF-3, N-terminal domain
AL541_RS05050	PF01632	Ribosomal protein L35
AL541_RS05055	PF00453	Ribosomal protein L20
AL541_RS05060	PF01906	Putative heavy-metal-binding
AL541_RS05065	PF13443	Cro/C1-type HTH DNA-binding domain
AL541_RS05075	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS05080	PF03176	MMPL family
AL541_RS05085	PF17131	AL541_RS05085
AL541_RS05095	PF01409	tRNA synthetases class II core domain (F)
AL541_RS05095	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AL541_RS05100	PF01588	Putative tRNA binding domain
AL541_RS05100	PF03147	Ferredoxin-fold anticodon binding domain
AL541_RS05100	PF03483	B3/4 domain
AL541_RS05100	PF03484	tRNA synthetase B5 domain
AL541_RS05105	PF03547	AL541_RS05105
AL541_RS05110	PF00216	Bacterial DNA-binding protein
AL541_RS05120	PF05724	Thiopurine S-methyltransferase (TPMT)
AL541_RS05125	PF02222	ATP-grasp domain
AL541_RS05130	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL541_RS05130	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
AL541_RS05135	PF04172	AL541_RS05135
AL541_RS05140	PF03788	AL541_RS05140
AL541_RS05145	PF00929	Exonuclease
AL541_RS05145	PF08411	Exonuclease C-terminal
AL541_RS05150	PF00375	Sodium:dicarboxylate symporter family
AL541_RS05155	PF08732	AL541_RS05155
AL541_RS05160	PF02277	Phosphoribosyltransferase
AL541_RS05165	PF02654	AL541_RS05165
AL541_RS05170	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AL541_RS05175	PF00300	Histidine phosphatase superfamily (branch 1)
AL541_RS05180	PF01432	Peptidase family M3
AL541_RS05180	PF08439	Oligopeptidase F
AL541_RS05185	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL541_RS05190	PF01032	FecCD transport family
AL541_RS05195	PF00005	ABC transporter
AL541_RS05200	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL541_RS05205	PF07209	AL541_RS05205
AL541_RS05210	PF07690	Major Facilitator Superfamily
AL541_RS05215	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS05215	PF03466	LysR substrate binding domain
AL541_RS05220	PF00462	Glutaredoxin
AL541_RS05225	PF01863	Protein of unknown function DUF45
AL541_RS05230	PF05971	Protein of unknown function (DUF890)
AL541_RS05240	PF03572	Peptidase family S41
AL541_RS05250	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS05250	PF07729	FCD domain
AL541_RS05255	PF00171	Aldehyde dehydrogenase family
AL541_RS05260	PF05544	Proline racemase
AL541_RS05265	PF01266	FAD dependent oxidoreductase
AL541_RS05270	PF13416	Bacterial extracellular solute-binding protein
AL541_RS05275	PF02423	Ornithine cyclodeaminase/mu-crystallin family
AL541_RS05280	PF00701	Dihydrodipicolinate synthetase family
AL541_RS05285	PF00005	ABC transporter
AL541_RS05285	PF08402	TOBE domain
AL541_RS05290	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS05295	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS05305	PF00801	PKD domain
AL541_RS05305	PF01752	Collagenase
AL541_RS05305	PF08453	Peptidase family M9 N-terminal
AL541_RS05310	PF00557	Metallopeptidase family M24
AL541_RS05310	PF01321	Creatinase/Prolidase N-terminal domain
AL541_RS05310	PF16188	AL541_RS05310
AL541_RS05310	PF16189	AL541_RS05310
AL541_RS05315	PF00005	ABC transporter
AL541_RS05315	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS05320	PF00005	ABC transporter
AL541_RS05320	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS05325	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS05325	PF12911	AL541_RS05325
AL541_RS05330	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS05335	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS05340	PF01546	Peptidase family M20/M25/M40
AL541_RS05340	PF07687	Peptidase dimerisation domain
AL541_RS05345	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS05345	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
AL541_RS05350	PF04209	homogentisate 1,2-dioxygenase
AL541_RS05355	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL541_RS05360	PF13417	Glutathione S-transferase, N-terminal domain
AL541_RS05365	PF10881	AL541_RS05365
AL541_RS05450	PF14412	AL541_RS05450
AL541_RS05475	PF11665	AL541_RS05475
AL541_RS05515	PF08818	Domain of unknown function (DU1801)
AL541_RS05520	PF02694	AL541_RS05520
AL541_RS05530	PF14234	AL541_RS05530
AL541_RS05535	PF03553	AL541_RS05535
AL541_RS05540	PF00120	Glutamine synthetase, catalytic domain
AL541_RS05550	PF07722	Peptidase C26
AL541_RS05555	PF01381	Helix-turn-helix
AL541_RS05555	PF07883	Cupin domain
AL541_RS05560	PF00171	Aldehyde dehydrogenase family
AL541_RS05565	PF01266	FAD dependent oxidoreductase
AL541_RS05570	PF00795	Carbon-nitrogen hydrolase
AL541_RS05575	PF04371	Porphyromonas-type peptidyl-arginine deiminase
AL541_RS05580	PF00171	Aldehyde dehydrogenase family
AL541_RS05585	PF00202	Aminotransferase class-III
AL541_RS05590	PF00563	EAL domain
AL541_RS05595	PF00892	EamA-like transporter family
AL541_RS05600	PF01047	MarR family
AL541_RS05605	PF04237	YjbR
AL541_RS05610	PF06127	AL541_RS05610
AL541_RS05630	PF00072	Response regulator receiver domain
AL541_RS05630	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS05630	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS05635	PF00563	EAL domain
AL541_RS05635	PF00990	GGDEF domain
AL541_RS05640	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AL541_RS05645	PF13431	Tetratricopeptide repeat
AL541_RS05650	PF04204	Homoserine O-succinyltransferase
AL541_RS05660	PF00893	Small Multidrug Resistance protein
AL541_RS05665	PF03279	AL541_RS05665
AL541_RS05670	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AL541_RS05675	PF00271	Helicase conserved C-terminal domain
AL541_RS05675	PF04851	Type III restriction enzyme, res subunit
AL541_RS05680	PF12128	AL541_RS05680
AL541_RS05700	PF13280	AL541_RS05700
AL541_RS05705	PF00239	Resolvase, N terminal domain
AL541_RS05705	PF07508	Recombinase
AL541_RS05710	PF04851	Type III restriction enzyme, res subunit
AL541_RS05735	PF13671	AAA domain
AL541_RS05745	PF01926	50S ribosome-binding GTPase
AL541_RS05750	PF04548	AIG1 family
AL541_RS05760	PF00816	H-NS histone family
AL541_RS05765	PF05277	AL541_RS05765
AL541_RS05780	PF08774	VRR-NUC domain
AL541_RS05795	PF03235	AL541_RS05795
AL541_RS05800	PF03235	AL541_RS05800
AL541_RS05800	PF07510	AL541_RS05800
AL541_RS05805	PF09509	AL541_RS05805
AL541_RS05810	PF13175	AAA ATPase domain
AL541_RS05815	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AL541_RS05820	PF01381	Helix-turn-helix
AL541_RS05830	PF03432	AL541_RS05830
AL541_RS05840	PF00990	GGDEF domain
AL541_RS05845	PF13280	AL541_RS05845
AL541_RS05860	PF01935	Domain of unknown function DUF87
AL541_RS05885	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AL541_RS05890	PF01810	AL541_RS05890
AL541_RS05900	PF01235	AL541_RS05900
AL541_RS05925	PF00884	Sulfatase
AL541_RS05930	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL541_RS05935	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS05940	PF00005	ABC transporter
AL541_RS05940	PF00571	CBS domain
AL541_RS05945	PF00027	Cyclic nucleotide-binding domain
AL541_RS05945	PF00571	CBS domain
AL541_RS05945	PF03445	AL541_RS05945
AL541_RS05945	PF10335	AL541_RS05945
AL541_RS05950	PF00929	Exonuclease
AL541_RS05955	PF02028	BCCT family transporter
AL541_RS05960	PF00583	Acetyltransferase (GNAT) family
AL541_RS05965	PF00202	Aminotransferase class-III
AL541_RS05970	PF06339	AL541_RS05970
AL541_RS05975	PF00696	Amino acid kinase family
AL541_RS05980	PF00884	Sulfatase
AL541_RS05980	PF14707	C-terminal region of aryl-sulfatase
AL541_RS05985	PF13414	TPR repeat
AL541_RS05985	PF13432	Tetratricopeptide repeat
AL541_RS05985	PF13435	Cytochrome c554 and c-prime
AL541_RS05990	PF03781	Sulfatase-modifying factor enzyme 1
AL541_RS05995	PF04055	Radical SAM superfamily
AL541_RS05995	PF13186	Iron-sulfur cluster-binding domain
AL541_RS06005	PF12710	haloacid dehalogenase-like hydrolase
AL541_RS06010	PF00884	Sulfatase
AL541_RS06015	PF00884	Sulfatase
AL541_RS06030	PF13437	HlyD family secretion protein
AL541_RS06035	PF02321	Outer membrane efflux protein
AL541_RS06040	PF00691	OmpA family
AL541_RS06050	PF00455	AL541_RS06050
AL541_RS06050	PF08220	DeoR-like helix-turn-helix domain
AL541_RS06055	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL541_RS06055	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL541_RS06060	PF03928	Domain of unknown function (DUF336)
AL541_RS06065	PF00990	GGDEF domain
AL541_RS06065	PF02743	Cache domain
AL541_RS06070	PF12570	AL541_RS06070
AL541_RS06080	PF13673	Acetyltransferase (GNAT) domain
AL541_RS06085	PF00939	Sodium:sulfate symporter transmembrane region
AL541_RS06090	PF00027	Cyclic nucleotide-binding domain
AL541_RS06090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS06095	PF00072	Response regulator receiver domain
AL541_RS06100	PF00563	EAL domain
AL541_RS06100	PF00990	GGDEF domain
AL541_RS06100	PF08447	PAS fold
AL541_RS06105	PF01966	HD domain
AL541_RS06105	PF11871	AL541_RS06105
AL541_RS06110	PF01810	AL541_RS06110
AL541_RS06115	PF11230	AL541_RS06115
AL541_RS06120	PF04055	Radical SAM superfamily
AL541_RS06120	PF13353	4Fe-4S single cluster domain
AL541_RS06125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS06125	PF03466	LysR substrate binding domain
AL541_RS06130	PF03741	AL541_RS06130
AL541_RS06135	PF13640	2OG-Fe(II) oxygenase superfamily
AL541_RS06140	PF01966	HD domain
AL541_RS06145	PF00465	Iron-containing alcohol dehydrogenase
AL541_RS06150	PF03222	Tryptophan/tyrosine permease family
AL541_RS06155	PF13487	HD domain
AL541_RS06165	PF00005	ABC transporter
AL541_RS06170	PF01497	Periplasmic binding protein
AL541_RS06175	PF01032	FecCD transport family
AL541_RS06180	PF00593	TonB dependent receptor
AL541_RS06180	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS06190	PF00005	ABC transporter
AL541_RS06190	PF00664	ABC transporter transmembrane region
AL541_RS06195	PF00005	ABC transporter
AL541_RS06195	PF00664	ABC transporter transmembrane region
AL541_RS06200	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS06205	PF03616	AL541_RS06205
AL541_RS06210	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS06210	PF03466	LysR substrate binding domain
AL541_RS06215	PF03992	Antibiotic biosynthesis monooxygenase
AL541_RS06220	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL541_RS06225	PF03352	Methyladenine glycosylase
AL541_RS06235	PF00012	Hsp70 protein
AL541_RS06235	PF12531	AL541_RS06235
AL541_RS06240	PF00012	Hsp70 protein
AL541_RS06245	PF10816	AL541_RS06245
AL541_RS06250	PF00990	GGDEF domain
AL541_RS06250	PF03924	CHASE domain
AL541_RS06255	PF00929	Exonuclease
AL541_RS06260	PF05099	Tellurite resistance protein TerB
AL541_RS06265	PF09423	PhoD-like phosphatase
AL541_RS06275	PF06629	AL541_RS06275
AL541_RS06285	PF02525	Flavodoxin-like fold
AL541_RS06290	PF00270	DEAD/DEAH box helicase
AL541_RS06290	PF00271	Helicase conserved C-terminal domain
AL541_RS06290	PF04408	Helicase associated domain (HA2)
AL541_RS06290	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AL541_RS06290	PF11898	AL541_RS06290
AL541_RS06295	PF13505	Outer membrane protein beta-barrel domain
AL541_RS06300	PF13505	Outer membrane protein beta-barrel domain
AL541_RS06305	PF02028	BCCT family transporter
AL541_RS06310	PF13671	AAA domain
AL541_RS06315	PF02397	AL541_RS06315
AL541_RS06320	PF13641	Glycosyltransferase like family 2
AL541_RS06325	PF00534	Glycosyl transferases group 1
AL541_RS06325	PF13439	Glycosyltransferase Family 4
AL541_RS06335	PF13692	Glycosyl transferases group 1
AL541_RS06340	PF04932	AL541_RS06340
AL541_RS06345	PF01943	AL541_RS06345
AL541_RS06350	PF00534	Glycosyl transferases group 1
AL541_RS06355	PF00534	Glycosyl transferases group 1
AL541_RS06355	PF13439	Glycosyltransferase Family 4
AL541_RS06360	PF00534	Glycosyl transferases group 1
AL541_RS06360	PF13439	Glycosyltransferase Family 4
AL541_RS06365	PF00072	Response regulator receiver domain
AL541_RS06365	PF00158	Sigma-54 interaction domain
AL541_RS06365	PF02954	Bacterial regulatory protein, Fis family
AL541_RS06370	PF01627	Hpt domain
AL541_RS06380	PF02563	Polysaccharide biosynthesis/export protein
AL541_RS06380	PF10531	SLBB domain
AL541_RS06385	PF00691	OmpA family
AL541_RS06390	PF13466	STAS domain
AL541_RS06395	PF01068	ATP dependent DNA ligase domain
AL541_RS06395	PF14743	DNA ligase OB-like domain
AL541_RS06400	PF11279	AL541_RS06400
AL541_RS06405	PF01554	MatE
AL541_RS06410	PF00677	Lumazine binding domain
AL541_RS06415	PF14255	AL541_RS06415
AL541_RS06420	PF03881	Fructosamine kinase
AL541_RS06425	PF00072	Response regulator receiver domain
AL541_RS06430	PF00990	GGDEF domain
AL541_RS06435	PF12290	AL541_RS06435
AL541_RS06440	PF00877	NlpC/P60 family
AL541_RS06445	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS06450	PF00293	NUDIX domain
AL541_RS06465	PF04116	AL541_RS06465
AL541_RS06470	PF03942	AL541_RS06470
AL541_RS06475	PF00480	ROK family
AL541_RS06480	PF11173	AL541_RS06480
AL541_RS06485	PF00994	Probable molybdopterin binding domain
AL541_RS06485	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AL541_RS06485	PF03453	MoeA N-terminal region (domain I and II)
AL541_RS06485	PF03454	MoeA C-terminal region (domain IV)
AL541_RS06490	PF12804	MobA-like NTP transferase domain
AL541_RS06495	PF00005	ABC transporter
AL541_RS06500	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS06505	PF12849	PBP superfamily domain
AL541_RS06510	PF00072	Response regulator receiver domain
AL541_RS06510	PF00158	Sigma-54 interaction domain
AL541_RS06510	PF02954	Bacterial regulatory protein, Fis family
AL541_RS06515	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS06515	PF00672	HAMP domain
AL541_RS06515	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS06515	PF17202	AL541_RS06515
AL541_RS06525	PF00005	ABC transporter
AL541_RS06525	PF12848	ABC transporter
AL541_RS06530	PF02634	FdhD/NarQ family
AL541_RS06535	PF11749	AL541_RS06535
AL541_RS06540	PF11748	AL541_RS06540
AL541_RS06545	PF00037	4Fe-4S binding domain
AL541_RS06545	PF12838	4Fe-4S dicluster domain
AL541_RS06550	PF02613	Nitrate reductase delta subunit
AL541_RS06560	PF00384	Molybdopterin oxidoreductase
AL541_RS06560	PF01568	Molydopterin dinucleotide binding domain
AL541_RS06560	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL541_RS06565	PF13247	4Fe-4S dicluster domain
AL541_RS06570	PF01292	Prokaryotic cytochrome b561
AL541_RS06580	PF03527	AL541_RS06580
AL541_RS06580	PF05593	AL541_RS06580
AL541_RS06585	PF15575	AL541_RS06585
AL541_RS06600	PF15575	AL541_RS06600
AL541_RS06610	PF15575	AL541_RS06610
AL541_RS06625	PF15575	AL541_RS06625
AL541_RS06635	PF15575	AL541_RS06635
AL541_RS06640	PF15575	AL541_RS06640
AL541_RS06650	PF15575	AL541_RS06650
AL541_RS06655	PF15575	AL541_RS06655
AL541_RS06665	PF15575	AL541_RS06665
AL541_RS06670	PF15575	AL541_RS06670
AL541_RS06680	PF15575	AL541_RS06680
AL541_RS06710	PF12796	Ankyrin repeats (3 copies)
AL541_RS06715	PF00909	Ammonium Transporter Family
AL541_RS06720	PF02146	Sir2 family
AL541_RS06725	PF13416	Bacterial extracellular solute-binding protein
AL541_RS06730	PF13416	Bacterial extracellular solute-binding protein
AL541_RS06735	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS06740	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS06745	PF00005	ABC transporter
AL541_RS06745	PF08402	TOBE domain
AL541_RS06755	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL541_RS06760	PF11205	AL541_RS06760
AL541_RS06765	PF01171	PP-loop family
AL541_RS06770	PF00582	Universal stress protein family
AL541_RS06775	PF00027	Cyclic nucleotide-binding domain
AL541_RS06775	PF13545	Crp-like helix-turn-helix domain
AL541_RS06780	PF13386	AL541_RS06780
AL541_RS06785	PF03597	AL541_RS06785
AL541_RS06790	PF00122	E1-E2 ATPase
AL541_RS06790	PF00403	Heavy-metal-associated domain
AL541_RS06790	PF00702	haloacid dehalogenase-like hydrolase
AL541_RS06790	PF12156	AL541_RS06790
AL541_RS06795	PF05751	AL541_RS06795
AL541_RS06800	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL541_RS06800	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
AL541_RS06805	PF05545	AL541_RS06805
AL541_RS06810	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
AL541_RS06815	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL541_RS06825	PF08495	AL541_RS06825
AL541_RS06825	PF10442	AL541_RS06825
AL541_RS06830	PF00072	Response regulator receiver domain
AL541_RS06830	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS06830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS06835	PF14412	AL541_RS06835
AL541_RS06850	PF12321	AL541_RS06850
AL541_RS06855	PF06303	Organiser of macrodomain of Terminus of chromosome
AL541_RS06855	PF17414	AL541_RS06855
AL541_RS06860	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL541_RS06860	PF13654	AAA domain
AL541_RS06865	PF07977	FabA-like domain
AL541_RS06870	PF04957	Ribosome modulation factor
AL541_RS06875	PF11949	AL541_RS06875
AL541_RS06880	PF00005	ABC transporter
AL541_RS06880	PF12848	ABC transporter
AL541_RS06880	PF16326	AL541_RS06880
AL541_RS06885	PF05768	Glutaredoxin-like domain (DUF836)
AL541_RS06890	PF01170	Putative RNA methylase family UPF0020
AL541_RS06890	PF02926	THUMP domain
AL541_RS06890	PF10672	S-adenosylmethionine-dependent methyltransferase
AL541_RS06895	PF07126	AL541_RS06895
AL541_RS06900	PF01180	Dihydroorotate dehydrogenase
AL541_RS06905	PF05088	AL541_RS06905
AL541_RS06910	PF11197	AL541_RS06910
AL541_RS06915	PF01433	Peptidase family M1
AL541_RS06915	PF11940	Domain of unknown function (DUF3458)
AL541_RS06915	PF17432	AL541_RS06915
AL541_RS06925	PF00595	PDZ domain (Also known as DHR or GLGF)
AL541_RS06925	PF03572	Peptidase family S41
AL541_RS06925	PF08180	AL541_RS06925
AL541_RS06925	PF11818	AL541_RS06925
AL541_RS06930	PF04352	ProQ/FINO family
AL541_RS06930	PF17516	AL541_RS06930
AL541_RS06935	PF13185	GAF domain
AL541_RS06940	PF00005	ABC transporter
AL541_RS06940	PF00664	ABC transporter transmembrane region
AL541_RS06945	PF04403	AL541_RS06945
AL541_RS06950	PF02470	AL541_RS06950
AL541_RS06955	PF01189	NOL1/NOP2/sun family
AL541_RS06955	PF13636	pre-rRNA processing and ribosome biogenesis
AL541_RS06955	PF17125	AL541_RS06955
AL541_RS06960	PF13509	S1 domain
AL541_RS06970	PF14539	Domain of unknown function (DUF4442)
AL541_RS06975	PF00793	DAHP synthetase I family
AL541_RS06980	PF04461	Protein of unknown function (DUF520)
AL541_RS06985	PF10414	Sirohaem synthase dimerisation region
AL541_RS06985	PF13241	Putative NAD(P)-binding
AL541_RS06985	PF14824	Sirohaem biosynthesis protein central
AL541_RS06995	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS07000	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS07005	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS07010	PF00005	ABC transporter
AL541_RS07015	PF01027	Inhibitor of apoptosis-promoting Bax1
AL541_RS07025	PF04358	DsrC like protein
AL541_RS07030	PF00708	Acylphosphatase
AL541_RS07035	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS07040	PF10672	S-adenosylmethionine-dependent methyltransferase
AL541_RS07050	PF02321	Outer membrane efflux protein
AL541_RS07055	PF00691	OmpA family
AL541_RS07060	PF00028	Cadherin domain
AL541_RS07060	PF03160	Calx-beta domain
AL541_RS07060	PF13519	von Willebrand factor type A domain
AL541_RS07075	PF02321	Outer membrane efflux protein
AL541_RS07080	PF00691	OmpA family
AL541_RS07085	PF11042	AL541_RS07085
AL541_RS07090	PF00990	GGDEF domain
AL541_RS07090	PF13424	Tetratricopeptide repeat
AL541_RS07095	PF01614	Bacterial transcriptional regulator
AL541_RS07095	PF09339	IclR helix-turn-helix domain
AL541_RS07100	PF00106	short chain dehydrogenase
AL541_RS07105	PF00248	Aldo/keto reductase family
AL541_RS07110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS07110	PF03466	LysR substrate binding domain
AL541_RS07115	PF00296	Luciferase-like monooxygenase
AL541_RS07120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS07120	PF03466	LysR substrate binding domain
AL541_RS07125	PF07690	Major Facilitator Superfamily
AL541_RS07130	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS07135	PF00107	Zinc-binding dehydrogenase
AL541_RS07135	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS07140	PF01965	DJ-1/PfpI family
AL541_RS07140	PF12833	Helix-turn-helix domain
AL541_RS07145	PF00857	Isochorismatase family
AL541_RS07150	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS07155	PF03773	AL541_RS07155
AL541_RS07160	PF00107	Zinc-binding dehydrogenase
AL541_RS07160	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS07165	PF02574	Homocysteine S-methyltransferase
AL541_RS07170	PF00005	ABC transporter
AL541_RS07175	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS07180	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS07185	PF11777	AL541_RS07185
AL541_RS07190	PF00267	Gram-negative porin
AL541_RS07195	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS07195	PF03466	LysR substrate binding domain
AL541_RS07200	PF16576	AL541_RS07200
AL541_RS07205	PF00873	AcrB/AcrD/AcrF family
AL541_RS07210	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS07210	PF03466	LysR substrate binding domain
AL541_RS07220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS07220	PF03466	LysR substrate binding domain
AL541_RS07225	PF01810	AL541_RS07225
AL541_RS07230	PF12844	Helix-turn-helix domain
AL541_RS07235	PF06508	Queuosine biosynthesis protein QueC
AL541_RS07240	PF13394	4Fe-4S single cluster domain
AL541_RS07245	PF08282	haloacid dehalogenase-like hydrolase
AL541_RS07250	PF00293	NUDIX domain
AL541_RS07255	PF00089	Trypsin
AL541_RS07255	PF02839	Carbohydrate binding domain
AL541_RS07260	PF00583	Acetyltransferase (GNAT) family
AL541_RS07265	PF00501	AMP-binding enzyme
AL541_RS07265	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS07265	PF16177	AL541_RS07265
AL541_RS07270	PF04303	PrpF protein
AL541_RS07275	PF00330	Aconitase family (aconitate hydratase)
AL541_RS07275	PF00694	Aconitase C-terminal domain
AL541_RS07280	PF00285	Citrate synthase
AL541_RS07285	PF13714	Phosphoenolpyruvate phosphomutase
AL541_RS07290	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS07290	PF07729	FCD domain
AL541_RS07295	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL541_RS07300	PF03401	Tripartite tricarboxylate transporter family receptor
AL541_RS07305	PF07331	AL541_RS07305
AL541_RS07310	PF01970	AL541_RS07310
AL541_RS07320	PF01925	AL541_RS07320
AL541_RS07325	PF16868	AL541_RS07325
AL541_RS07335	PF05844	YopD protein
AL541_RS07340	PF04888	AL541_RS07340
AL541_RS07345	PF07720	Tetratricopeptide repeat
AL541_RS07350	PF04792	V antigen (LcrV) protein
AL541_RS07355	PF07216	AL541_RS07355
AL541_RS07360	PF09621	AL541_RS07360
AL541_RS07365	PF00771	FHIPEP family
AL541_RS07370	PF14559	Tetratricopeptide repeat
AL541_RS07375	PF09474	AL541_RS07375
AL541_RS07380	PF05932	Tir chaperone protein (CesT) family
AL541_RS07385	PF09059	TyeA
AL541_RS07390	PF07201	HrpJ-like domain
AL541_RS07395	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL541_RS07395	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL541_RS07400	PF07321	Type III secretion protein YscO
AL541_RS07410	PF01052	Surface presentation of antigens (SPOA)
AL541_RS07415	PF00813	AL541_RS07415
AL541_RS07420	PF01313	AL541_RS07420
AL541_RS07425	PF01311	AL541_RS07425
AL541_RS07430	PF01312	FlhB HrpN YscU SpaS Family
AL541_RS07435	PF12833	Helix-turn-helix domain
AL541_RS07440	PF00892	EamA-like transporter family
AL541_RS07450	PF05932	Tir chaperone protein (CesT) family
AL541_RS07460	PF05932	Tir chaperone protein (CesT) family
AL541_RS07465	PF02661	Fic/DOC family
AL541_RS07470	PF05932	Tir chaperone protein (CesT) family
AL541_RS07475	PF02108	AL541_RS07475
AL541_RS07480	PF06578	AL541_RS07480
AL541_RS07485	PF01514	Secretory protein of YscJ/FliF family
AL541_RS07490	PF17001	AL541_RS07490
AL541_RS07495	PF09025	YopR Core
AL541_RS07500	PF09477	Bacterial type II secretion system chaperone protein (type_III_yscG)
AL541_RS07505	PF09392	Type III secretion needle MxiH like
AL541_RS07510	PF08988	Protein of unknown function (DUF1895)
AL541_RS07515	PF16693	AL541_RS07515
AL541_RS07515	PF16697	AL541_RS07515
AL541_RS07520	PF00263	AL541_RS07520
AL541_RS07520	PF03958	Bacterial type II/III secretion system short domain
AL541_RS07525	PF05932	Tir chaperone protein (CesT) family
AL541_RS07530	PF16806	AL541_RS07530
AL541_RS07535	PF12833	Helix-turn-helix domain
AL541_RS07540	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL541_RS07545	PF05932	Tir chaperone protein (CesT) family
AL541_RS07555	PF00171	Aldehyde dehydrogenase family
AL541_RS07560	PF00158	Sigma-54 interaction domain
AL541_RS07560	PF01590	GAF domain
AL541_RS07560	PF02954	Bacterial regulatory protein, Fis family
AL541_RS07575	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AL541_RS07575	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL541_RS07580	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL541_RS07585	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AL541_RS07585	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AL541_RS07590	PF12833	Helix-turn-helix domain
AL541_RS07590	PF14526	Integron-associated effector binding protein
AL541_RS07595	PF00593	TonB dependent receptor
AL541_RS07595	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS07600	PF00072	Response regulator receiver domain
AL541_RS07600	PF12431	AL541_RS07600
AL541_RS07605	PF00989	PAS fold
AL541_RS07605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS07605	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL541_RS07605	PF17203	AL541_RS07605
AL541_RS07615	PF02321	Outer membrane efflux protein
AL541_RS07620	PF13437	HlyD family secretion protein
AL541_RS07620	PF13533	Biotin-lipoyl like
AL541_RS07625	PF12698	ABC-2 family transporter protein
AL541_RS07630	PF12698	ABC-2 family transporter protein
AL541_RS07635	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS07635	PF03466	LysR substrate binding domain
AL541_RS07645	PF01734	Patatin-like phospholipase
AL541_RS07650	PF08543	Phosphomethylpyrimidine kinase
AL541_RS07655	PF00155	Aminotransferase class I and II
AL541_RS07660	PF02080	TrkA-C domain
AL541_RS07660	PF06826	AL541_RS07660
AL541_RS07665	PF07869	AL541_RS07665
AL541_RS07670	PF16576	AL541_RS07670
AL541_RS07675	PF04632	AL541_RS07675
AL541_RS07685	PF00135	Carboxylesterase family
AL541_RS07690	PF13091	PLD-like domain
AL541_RS07695	PF01103	Surface antigen
AL541_RS07695	PF17243	AL541_RS07695
AL541_RS07700	PF11008	AL541_RS07700
AL541_RS07705	PF01810	AL541_RS07705
AL541_RS07710	PF01810	AL541_RS07710
AL541_RS07715	PF07237	Protein of unknown function (DUF1428)
AL541_RS07725	PF03992	Antibiotic biosynthesis monooxygenase
AL541_RS07730	PF03992	Antibiotic biosynthesis monooxygenase
AL541_RS07735	PF01411	tRNA synthetases class II (A)
AL541_RS07735	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL541_RS07740	PF13302	Acetyltransferase (GNAT) domain
AL541_RS07745	PF12464	Maltose acetyltransferase
AL541_RS07745	PF14602	Hexapeptide repeat of succinyl-transferase
AL541_RS07750	PF06271	AL541_RS07750
AL541_RS07755	PF01243	Pyridoxamine 5'-phosphate oxidase
AL541_RS07760	PF09413	Domain of unknown function (DUF2007)
AL541_RS07770	PF16695	AL541_RS07770
AL541_RS07775	PF13527	Acetyltransferase (GNAT) domain
AL541_RS07780	PF05016	Plasmid stabilisation system protein
AL541_RS07795	PF11665	AL541_RS07795
AL541_RS07805	PF04634	Protein of unknown function, DUF600
AL541_RS07810	PF11665	AL541_RS07810
AL541_RS07820	PF11665	AL541_RS07820
AL541_RS07830	PF11665	AL541_RS07830
AL541_RS07855	PF03831	PhnA protein
AL541_RS07855	PF08274	PhnA Zinc-Ribbon
AL541_RS07865	PF11665	AL541_RS07865
AL541_RS07885	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL541_RS07905	PF11665	AL541_RS07905
AL541_RS07925	PF11665	AL541_RS07925
AL541_RS07945	PF13333	AL541_RS07945
AL541_RS07950	PF00665	Integrase core domain
AL541_RS07950	PF13276	AL541_RS07950
AL541_RS07955	PF01527	Transposase
AL541_RS07960	PF11665	AL541_RS07960
AL541_RS07965	PF00293	NUDIX domain
AL541_RS07990	PF13957	AL541_RS07990
AL541_RS08010	PF11665	AL541_RS08010
AL541_RS08035	PF11665	AL541_RS08035
AL541_RS08040	PF01965	DJ-1/PfpI family
AL541_RS08045	PF13847	Methyltransferase domain
AL541_RS08065	PF07653	Variant SH3 domain
AL541_RS08075	PF10387	Protein of unknown function (DUF2442)
AL541_RS08080	PF13711	AL541_RS08080
AL541_RS08085	PF11665	AL541_RS08085
AL541_RS08095	PF11665	AL541_RS08095
AL541_RS08100	PF11964	SpoIIAA-like
AL541_RS08115	PF01636	Phosphotransferase enzyme family
AL541_RS08130	PF11665	AL541_RS08130
AL541_RS08135	PF04221	RelB antitoxin
AL541_RS08140	PF05016	Plasmid stabilisation system protein
AL541_RS08145	PF06042	Bacterial protein of unknown function (DUF925)
AL541_RS08160	PF13643	AL541_RS08160
AL541_RS08165	PF11665	AL541_RS08165
AL541_RS08170	PF11665	AL541_RS08170
AL541_RS08175	PF00561	alpha/beta hydrolase fold
AL541_RS08190	PF11665	AL541_RS08190
AL541_RS08205	PF11665	AL541_RS08205
AL541_RS08210	PF13847	Methyltransferase domain
AL541_RS08225	PF08867	AL541_RS08225
AL541_RS08245	PF13957	AL541_RS08245
AL541_RS08260	PF11665	AL541_RS08260
AL541_RS08275	PF00583	Acetyltransferase (GNAT) family
AL541_RS08280	PF11665	AL541_RS08280
AL541_RS08290	PF11665	AL541_RS08290
AL541_RS08295	PF06189	AL541_RS08295
AL541_RS08300	PF11665	AL541_RS08300
AL541_RS08310	PF11665	AL541_RS08310
AL541_RS08315	PF01230	HIT domain
AL541_RS08320	PF11665	AL541_RS08320
AL541_RS08325	PF10544	AL541_RS08325
AL541_RS08330	PF11665	AL541_RS08330
AL541_RS08340	PF00857	Isochorismatase family
AL541_RS08345	PF11665	AL541_RS08345
AL541_RS08350	PF13316	AL541_RS08350
AL541_RS08355	PF00583	Acetyltransferase (GNAT) family
AL541_RS08365	PF03167	Uracil DNA glycosylase superfamily
AL541_RS08380	PF11665	AL541_RS08380
AL541_RS08390	PF11665	AL541_RS08390
AL541_RS08400	PF11665	AL541_RS08400
AL541_RS08405	PF13302	Acetyltransferase (GNAT) domain
AL541_RS08410	PF11665	AL541_RS08410
AL541_RS08420	PF11665	AL541_RS08420
AL541_RS08430	PF11665	AL541_RS08430
AL541_RS08435	PF13420	Acetyltransferase (GNAT) domain
AL541_RS08440	PF11665	AL541_RS08440
AL541_RS08445	PF00583	Acetyltransferase (GNAT) family
AL541_RS08450	PF11665	AL541_RS08450
AL541_RS08460	PF02566	OsmC-like protein
AL541_RS08465	PF11665	AL541_RS08465
AL541_RS08470	PF01810	AL541_RS08470
AL541_RS08490	PF11665	AL541_RS08490
AL541_RS08495	PF00583	Acetyltransferase (GNAT) family
AL541_RS08500	PF11665	AL541_RS08500
AL541_RS08515	PF11665	AL541_RS08515
AL541_RS08520	PF14355	AL541_RS08520
AL541_RS08535	PF11665	AL541_RS08535
AL541_RS08540	PF04229	GrpB protein
AL541_RS08545	PF11665	AL541_RS08545
AL541_RS08550	PF00583	Acetyltransferase (GNAT) family
AL541_RS08555	PF11665	AL541_RS08555
AL541_RS08560	PF13302	Acetyltransferase (GNAT) domain
AL541_RS08565	PF11665	AL541_RS08565
AL541_RS08570	PF13310	AL541_RS08570
AL541_RS08580	PF11665	AL541_RS08580
AL541_RS08590	PF11665	AL541_RS08590
AL541_RS08600	PF11665	AL541_RS08600
AL541_RS08615	PF11665	AL541_RS08615
AL541_RS08630	PF13302	Acetyltransferase (GNAT) domain
AL541_RS08635	PF04480	Protein of unknown function (DUF559)
AL541_RS08645	PF11665	AL541_RS08645
AL541_RS08650	PF00293	NUDIX domain
AL541_RS08655	PF11665	AL541_RS08655
AL541_RS08660	PF00583	Acetyltransferase (GNAT) family
AL541_RS08670	PF11665	AL541_RS08670
AL541_RS08675	PF13676	TIR domain
AL541_RS08680	PF11665	AL541_RS08680
AL541_RS08690	PF11665	AL541_RS08690
AL541_RS08700	PF11665	AL541_RS08700
AL541_RS08705	PF13673	Acetyltransferase (GNAT) domain
AL541_RS08710	PF11665	AL541_RS08710
AL541_RS08720	PF11665	AL541_RS08720
AL541_RS08725	PF03544	Gram-negative bacterial TonB protein C-terminal
AL541_RS08730	PF13302	Acetyltransferase (GNAT) domain
AL541_RS08740	PF07081	Protein of unknown function (DUF1349)
AL541_RS08745	PF11665	AL541_RS08745
AL541_RS08750	PF07007	Protein of unknown function (DUF1311)
AL541_RS08755	PF11665	AL541_RS08755
AL541_RS08760	PF10137	AL541_RS08760
AL541_RS08770	PF11665	AL541_RS08770
AL541_RS08785	PF11665	AL541_RS08785
AL541_RS08800	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL541_RS08805	PF11665	AL541_RS08805
AL541_RS08835	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL541_RS08840	PF05016	Plasmid stabilisation system protein
AL541_RS08850	PF11665	AL541_RS08850
AL541_RS08860	PF11665	AL541_RS08860
AL541_RS08865	PF03992	Antibiotic biosynthesis monooxygenase
AL541_RS08870	PF11665	AL541_RS08870
AL541_RS08875	PF10077	AL541_RS08875
AL541_RS08880	PF00589	Phage integrase family
AL541_RS08880	PF13356	Domain of unknown function (DUF4102)
AL541_RS08900	PF08241	Methyltransferase domain
AL541_RS08905	PF01381	Helix-turn-helix
AL541_RS08915	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL541_RS08950	PF01648	4'-phosphopantetheinyl transferase superfamily
AL541_RS08960	PF00793	DAHP synthetase I family
AL541_RS08965	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS08970	PF00425	chorismate binding enzyme
AL541_RS08975	PF00501	AMP-binding enzyme
AL541_RS08975	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS08980	PF00550	Phosphopantetheine attachment site
AL541_RS08980	PF00857	Isochorismatase family
AL541_RS08985	PF01497	Periplasmic binding protein
AL541_RS08990	PF05977	Transmembrane secretion effector
AL541_RS08995	PF01032	FecCD transport family
AL541_RS09000	PF01032	FecCD transport family
AL541_RS09005	PF00005	ABC transporter
AL541_RS09010	PF00501	AMP-binding enzyme
AL541_RS09010	PF00550	Phosphopantetheine attachment site
AL541_RS09010	PF00668	Condensation domain
AL541_RS09010	PF00975	Thioesterase domain
AL541_RS09010	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS09015	PF03621	MbtH-like protein
AL541_RS09020	PF00756	Putative esterase
AL541_RS09020	PF11806	Domain of unknown function (DUF3327)
AL541_RS09025	PF00593	TonB dependent receptor
AL541_RS09025	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS09030	PF03824	AL541_RS09030
AL541_RS09035	PF07883	Cupin domain
AL541_RS09045	PF00027	Cyclic nucleotide-binding domain
AL541_RS09045	PF13545	Crp-like helix-turn-helix domain
AL541_RS09050	PF13429	Tetratricopeptide repeat
AL541_RS09060	PF02810	SEC-C motif
AL541_RS09065	PF01636	Phosphotransferase enzyme family
AL541_RS09070	PF00583	Acetyltransferase (GNAT) family
AL541_RS09080	PF11665	AL541_RS09080
AL541_RS09090	PF11665	AL541_RS09090
AL541_RS09100	PF11665	AL541_RS09100
AL541_RS09110	PF13673	Acetyltransferase (GNAT) domain
AL541_RS09120	PF04607	Region found in RelA / SpoT proteins
AL541_RS09120	PF11665	AL541_RS09120
AL541_RS09130	PF11665	AL541_RS09130
AL541_RS09135	PF00293	NUDIX domain
AL541_RS09140	PF11665	AL541_RS09140
AL541_RS09155	PF00857	Isochorismatase family
AL541_RS09160	PF11665	AL541_RS09160
AL541_RS09170	PF11665	AL541_RS09170
AL541_RS09175	PF13316	AL541_RS09175
AL541_RS09185	PF11665	AL541_RS09185
AL541_RS09195	PF11665	AL541_RS09195
AL541_RS09225	PF11665	AL541_RS09225
AL541_RS09235	PF11665	AL541_RS09235
AL541_RS09245	PF11665	AL541_RS09245
AL541_RS09255	PF11665	AL541_RS09255
AL541_RS09260	PF13847	Methyltransferase domain
AL541_RS09265	PF11665	AL541_RS09265
AL541_RS09270	PF07653	Variant SH3 domain
AL541_RS09280	PF00583	Acetyltransferase (GNAT) family
AL541_RS09295	PF11665	AL541_RS09295
AL541_RS09300	PF13302	Acetyltransferase (GNAT) domain
AL541_RS09305	PF11665	AL541_RS09305
AL541_RS09310	PF11665	AL541_RS09310
AL541_RS09320	PF11665	AL541_RS09320
AL541_RS09330	PF11665	AL541_RS09330
AL541_RS09340	PF11665	AL541_RS09340
AL541_RS09350	PF11665	AL541_RS09350
AL541_RS09355	PF13420	Acetyltransferase (GNAT) domain
AL541_RS09360	PF11665	AL541_RS09360
AL541_RS09365	PF13316	AL541_RS09365
AL541_RS09370	PF13302	Acetyltransferase (GNAT) domain
AL541_RS09375	PF11665	AL541_RS09375
AL541_RS09385	PF11665	AL541_RS09385
AL541_RS09390	PF02810	SEC-C motif
AL541_RS09395	PF11665	AL541_RS09395
AL541_RS09405	PF11665	AL541_RS09405
AL541_RS09410	PF07007	Protein of unknown function (DUF1311)
AL541_RS09425	PF11665	AL541_RS09425
AL541_RS09435	PF11665	AL541_RS09435
AL541_RS09455	PF11665	AL541_RS09455
AL541_RS09470	PF11665	AL541_RS09470
AL541_RS09480	PF11665	AL541_RS09480
AL541_RS09490	PF11665	AL541_RS09490
AL541_RS09495	PF00313	'Cold-shock' DNA-binding domain
AL541_RS09495	PF06961	AL541_RS09495
AL541_RS09505	PF11665	AL541_RS09505
AL541_RS09530	PF00589	Phage integrase family
AL541_RS09530	PF13495	Phage integrase, N-terminal SAM-like domain
AL541_RS09535	PF11163	AL541_RS09535
AL541_RS09540	PF13023	HD domain
AL541_RS09545	PF13302	Acetyltransferase (GNAT) domain
AL541_RS09550	PF00158	Sigma-54 interaction domain
AL541_RS09550	PF00989	PAS fold
AL541_RS09555	PF05128	AL541_RS09555
AL541_RS09560	PF04317	AL541_RS09560
AL541_RS09570	PF05681	AL541_RS09570
AL541_RS09570	PF05683	Fumarase C-terminus
AL541_RS09580	PF00425	chorismate binding enzyme
AL541_RS09580	PF04715	Anthranilate synthase component I, N terminal region
AL541_RS09585	PF00072	Response regulator receiver domain
AL541_RS09585	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS09585	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS09590	PF07700	Heme NO binding
AL541_RS09595	PF00293	NUDIX domain
AL541_RS09600	PF03222	Tryptophan/tyrosine permease family
AL541_RS09605	PF03313	AL541_RS09605
AL541_RS09605	PF03315	Serine dehydratase beta chain
AL541_RS09610	PF00563	EAL domain
AL541_RS09615	PF00583	Acetyltransferase (GNAT) family
AL541_RS09620	PF01242	6-pyruvoyl tetrahydropterin synthase
AL541_RS09625	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS09630	PF00152	tRNA synthetases class II (D, K and N)
AL541_RS09630	PF01336	OB-fold nucleic acid binding domain
AL541_RS09640	PF00155	Aminotransferase class I and II
AL541_RS09640	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS09655	PF00155	Aminotransferase class I and II
AL541_RS09660	PF13505	Outer membrane protein beta-barrel domain
AL541_RS09665	PF00027	Cyclic nucleotide-binding domain
AL541_RS09665	PF00571	CBS domain
AL541_RS09665	PF03445	AL541_RS09665
AL541_RS09665	PF10335	AL541_RS09665
AL541_RS09670	PF00929	Exonuclease
AL541_RS09675	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS09675	PF00672	HAMP domain
AL541_RS09675	PF02743	Cache domain
AL541_RS09680	PF02028	BCCT family transporter
AL541_RS09685	PF01047	MarR family
AL541_RS09690	PF00072	Response regulator receiver domain
AL541_RS09690	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS09695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS09695	PF07730	Histidine kinase
AL541_RS09695	PF17200	AL541_RS09695
AL541_RS09700	PF06808	AL541_RS09700
AL541_RS09705	PF04290	AL541_RS09705
AL541_RS09710	PF03480	Bacterial extracellular solute-binding protein, family 7
AL541_RS09720	PF11201	AL541_RS09720
AL541_RS09725	PF00753	Metallo-beta-lactamase superfamily
AL541_RS09730	PF05951	AL541_RS09730
AL541_RS09735	PF01471	Putative peptidoglycan binding domain
AL541_RS09735	PF03734	L,D-transpeptidase catalytic domain
AL541_RS09740	PF07433	AL541_RS09740
AL541_RS09745	PF09375	Imelysin
AL541_RS09750	PF06537	AL541_RS09750
AL541_RS09755	PF09375	Imelysin
AL541_RS09760	PF00925	GTP cyclohydrolase II
AL541_RS09770	PF03918	Cytochrome C biogenesis protein
AL541_RS09775	PF08534	Redoxin
AL541_RS09780	PF01578	AL541_RS09780
AL541_RS09780	PF16327	AL541_RS09780
AL541_RS09785	PF03916	AL541_RS09785
AL541_RS09790	PF12800	4Fe-4S binding domain
AL541_RS09790	PF13247	4Fe-4S dicluster domain
AL541_RS09795	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL541_RS09800	PF02335	Cytochrome c552
AL541_RS09810	PF07719	Tetratricopeptide repeat
AL541_RS09815	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL541_RS09815	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL541_RS09820	PF13489	Methyltransferase domain
AL541_RS09830	PF00317	Ribonucleotide reductase, all-alpha domain
AL541_RS09830	PF02867	Ribonucleotide reductase, barrel domain
AL541_RS09830	PF03477	ATP cone domain
AL541_RS09835	PF00268	Ribonucleotide reductase, small chain
AL541_RS09840	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL541_RS09845	PF00994	Probable molybdopterin binding domain
AL541_RS09850	PF13084	AL541_RS09850
AL541_RS09855	PF13740	ACT domain
AL541_RS09860	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL541_RS09865	PF03435	Saccharopine dehydrogenase
AL541_RS09865	PF16653	AL541_RS09865
AL541_RS09870	PF00202	Aminotransferase class-III
AL541_RS09870	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL541_RS09895	PF01066	CDP-alcohol phosphatidyltransferase
AL541_RS09900	PF01541	GIY-YIG catalytic domain
AL541_RS09900	PF02151	UvrB/uvrC motif
AL541_RS09900	PF08459	UvrC Helix-hairpin-helix N-terminal
AL541_RS09900	PF14520	Helix-hairpin-helix domain
AL541_RS09905	PF00072	Response regulator receiver domain
AL541_RS09905	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS09910	PF00136	DNA polymerase family B
AL541_RS09910	PF03104	DNA polymerase family B, exonuclease domain
AL541_RS09920	PF01132	Elongation factor P (EF-P) OB domain
AL541_RS09920	PF08207	Elongation factor P (EF-P) KOW-like domain
AL541_RS09920	PF09285	Elongation factor P, C-terminal
AL541_RS09925	PF04269	Protein of unknown function, DUF440
AL541_RS09930	PF00849	RNA pseudouridylate synthase
AL541_RS09930	PF01479	S4 domain
AL541_RS09935	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL541_RS09940	PF01300	Telomere recombination
AL541_RS09945	PF02811	PHP domain
AL541_RS09950	PF08056	AL541_RS09950
AL541_RS09955	PF00425	chorismate binding enzyme
AL541_RS09955	PF04715	Anthranilate synthase component I, N terminal region
AL541_RS09960	PF00117	Glutamine amidotransferase class-I
AL541_RS09965	PF00591	Glycosyl transferase family, a/b domain
AL541_RS09965	PF02885	Glycosyl transferase family, helical bundle domain
AL541_RS09970	PF00218	Indole-3-glycerol phosphate synthase
AL541_RS09970	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AL541_RS09975	PF00291	Pyridoxal-phosphate dependent enzyme
AL541_RS09980	PF00290	Tryptophan synthase alpha chain
AL541_RS09985	PF00027	Cyclic nucleotide-binding domain
AL541_RS09985	PF13545	Crp-like helix-turn-helix domain
AL541_RS09990	PF00501	AMP-binding enzyme
AL541_RS09990	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS10000	PF00375	Sodium:dicarboxylate symporter family
AL541_RS10005	PF17327	AL541_RS10005
AL541_RS10010	PF00072	Response regulator receiver domain
AL541_RS10010	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS10010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS10020	PF04279	AL541_RS10020
AL541_RS10025	PF03061	Thioesterase superfamily
AL541_RS10030	PF03795	YCII-related domain
AL541_RS10035	PF16549	AL541_RS10035
AL541_RS10040	PF01717	Cobalamin-independent synthase, Catalytic domain
AL541_RS10040	PF08267	Cobalamin-independent synthase, N-terminal domain
AL541_RS10045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS10045	PF03466	LysR substrate binding domain
AL541_RS10050	PF14056	AL541_RS10050
AL541_RS10060	PF00563	EAL domain
AL541_RS10060	PF00571	CBS domain
AL541_RS10060	PF00989	PAS fold
AL541_RS10065	PF04055	Radical SAM superfamily
AL541_RS10065	PF08497	AL541_RS10065
AL541_RS10065	PF11842	AL541_RS10065
AL541_RS10080	PF04138	AL541_RS10080
AL541_RS10085	PF02366	AL541_RS10085
AL541_RS10090	PF00535	Glycosyl transferase family 2
AL541_RS10095	PF00072	Response regulator receiver domain
AL541_RS10095	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS10100	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS10100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS10105	PF00069	Protein kinase domain
AL541_RS10105	PF13855	Leucine rich repeat
AL541_RS10115	PF00857	Isochorismatase family
AL541_RS10120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS10120	PF03466	LysR substrate binding domain
AL541_RS10125	PF13437	HlyD family secretion protein
AL541_RS10125	PF13533	Biotin-lipoyl like
AL541_RS10130	PF11168	AL541_RS10130
AL541_RS10130	PF13515	AL541_RS10130
AL541_RS10135	PF01717	Cobalamin-independent synthase, Catalytic domain
AL541_RS10140	PF08908	AL541_RS10140
AL541_RS10145	PF07968	Leukocidin/Hemolysin toxin family
AL541_RS10155	PF00005	ABC transporter
AL541_RS10160	PF02687	AL541_RS10160
AL541_RS10160	PF12704	MacB-like periplasmic core domain
AL541_RS10165	PF02687	AL541_RS10165
AL541_RS10165	PF12704	MacB-like periplasmic core domain
AL541_RS10170	PF02321	Outer membrane efflux protein
AL541_RS10175	PF16576	AL541_RS10175
AL541_RS10185	PF05257	CHAP domain
AL541_RS10195	PF00085	Thioredoxin
AL541_RS10200	PF02683	AL541_RS10200
AL541_RS10200	PF11412	Disulphide bond corrector protein DsbC
AL541_RS10200	PF13899	Thioredoxin-like
AL541_RS10210	PF00072	Response regulator receiver domain
AL541_RS10210	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS10215	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS10215	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS10215	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AL541_RS10220	PF13247	4Fe-4S dicluster domain
AL541_RS10225	PF03916	AL541_RS10225
AL541_RS10230	PF00384	Molybdopterin oxidoreductase
AL541_RS10230	PF01568	Molydopterin dinucleotide binding domain
AL541_RS10235	PF00034	Cytochrome c
AL541_RS10240	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL541_RS10245	PF04403	AL541_RS10245
AL541_RS10250	PF02470	AL541_RS10250
AL541_RS10255	PF03886	Protein of unknown function (DUF330)
AL541_RS10270	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS10275	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL541_RS10280	PF13176	Tetratricopeptide repeat
AL541_RS10280	PF14559	Tetratricopeptide repeat
AL541_RS10285	PF06305	AL541_RS10285
AL541_RS10290	PF00216	Bacterial DNA-binding protein
AL541_RS10295	PF00575	S1 RNA binding domain
AL541_RS10300	PF02224	Cytidylate kinase
AL541_RS10305	PF01343	Peptidase family S49
AL541_RS10305	PF08496	AL541_RS10305
AL541_RS10310	PF00106	short chain dehydrogenase
AL541_RS10315	PF00154	recA bacterial DNA recombination protein
AL541_RS10320	PF00817	impB/mucB/samB family
AL541_RS10325	PF01336	OB-fold nucleic acid binding domain
AL541_RS10325	PF02811	PHP domain
AL541_RS10325	PF07733	Bacterial DNA polymerase III alpha subunit
AL541_RS10325	PF14579	Helix-hairpin-helix motif
AL541_RS10330	PF00072	Response regulator receiver domain
AL541_RS10330	PF01584	CheW-like domain
AL541_RS10335	PF00480	ROK family
AL541_RS10340	PF00224	Pyruvate kinase, barrel domain
AL541_RS10340	PF02887	Pyruvate kinase, alpha/beta domain
AL541_RS10345	PF01734	Patatin-like phospholipase
AL541_RS10355	PF13505	Outer membrane protein beta-barrel domain
AL541_RS10360	PF00209	Sodium:neurotransmitter symporter family
AL541_RS10375	PF00367	phosphotransferase system, EIIB
AL541_RS10375	PF02378	Phosphotransferase system, EIIC
AL541_RS10380	PF01026	TatD related DNase
AL541_RS10385	PF09115	DNA polymerase III, delta subunit, C terminal
AL541_RS10385	PF13177	DNA polymerase III, delta subunit
AL541_RS10390	PF02223	Thymidylate kinase
AL541_RS10395	PF02618	YceG-like family
AL541_RS10400	PF01063	Aminotransferase class IV
AL541_RS10405	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL541_RS10405	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL541_RS10410	PF00550	Phosphopantetheine attachment site
AL541_RS10415	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS10420	PF00698	Acyl transferase domain
AL541_RS10425	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL541_RS10425	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL541_RS10430	PF02504	Fatty acid synthesis protein
AL541_RS10435	PF01783	Ribosomal L32p protein family
AL541_RS10440	PF02620	AL541_RS10440
AL541_RS10445	PF02545	Maf-like protein
AL541_RS10450	PF00849	RNA pseudouridylate synthase
AL541_RS10450	PF01479	S4 domain
AL541_RS10460	PF00575	S1 RNA binding domain
AL541_RS10460	PF10150	Ribonuclease E/G family
AL541_RS10470	PF00916	AL541_RS10470
AL541_RS10470	PF01740	STAS domain
AL541_RS10475	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL541_RS10480	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
AL541_RS10480	PF12557	Cob(I)alamin adenosyltransferase N terminal
AL541_RS10485	PF05170	AL541_RS10485
AL541_RS10490	PF00485	Phosphoribulokinase / Uridine kinase family
AL541_RS10495	PF10609	ParA/MinD ATPase like
AL541_RS10500	PF01588	Putative tRNA binding domain
AL541_RS10500	PF09334	tRNA synthetases class I (M)
AL541_RS10520	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS10520	PF07840	FadR C-terminal domain
AL541_RS10525	PF06450	AL541_RS10525
AL541_RS10530	PF02600	Disulfide bond formation protein DsbB
AL541_RS10535	PF02810	SEC-C motif
AL541_RS10535	PF03695	Uncharacterised protein family (UPF0149)
AL541_RS10540	PF01207	Dihydrouridine synthase (Dus)
AL541_RS10545	PF00990	GGDEF domain
AL541_RS10550	PF00128	Alpha amylase, catalytic domain
AL541_RS10550	PF02903	Alpha amylase, N-terminal ig-like domain
AL541_RS10555	PF00005	ABC transporter
AL541_RS10560	PF02653	AL541_RS10560
AL541_RS10565	PF04392	ABC transporter substrate binding protein
AL541_RS10570	PF04217	AL541_RS10570
AL541_RS10575	PF00871	Acetokinase family
AL541_RS10580	PF01515	Phosphate acetyl/butaryl transferase
AL541_RS10580	PF07085	DRTGG domain
AL541_RS10580	PF13500	AAA domain
AL541_RS10590	PF13409	Glutathione S-transferase, N-terminal domain
AL541_RS10590	PF13410	Glutathione S-transferase, C-terminal domain
AL541_RS10595	PF00005	ABC transporter
AL541_RS10595	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS10600	PF00005	ABC transporter
AL541_RS10600	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS10605	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS10605	PF12911	AL541_RS10605
AL541_RS10610	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS10615	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS10620	PF02391	MoaE protein
AL541_RS10625	PF02597	ThiS family
AL541_RS10630	PF01967	MoaC family
AL541_RS10635	PF00994	Probable molybdopterin binding domain
AL541_RS10640	PF04055	Radical SAM superfamily
AL541_RS10640	PF06463	Molybdenum Cofactor Synthesis C
AL541_RS10640	PF13353	4Fe-4S single cluster domain
AL541_RS10645	PF01933	Uncharacterised protein family UPF0052
AL541_RS10650	PF01627	Hpt domain
AL541_RS10655	PF00072	Response regulator receiver domain
AL541_RS10655	PF00158	Sigma-54 interaction domain
AL541_RS10655	PF02954	Bacterial regulatory protein, Fis family
AL541_RS10660	PF00271	Helicase conserved C-terminal domain
AL541_RS10660	PF02151	UvrB/uvrC motif
AL541_RS10660	PF04851	Type III restriction enzyme, res subunit
AL541_RS10660	PF12344	Ultra-violet resistance protein B
AL541_RS10670	PF01228	Glycine radical
AL541_RS10670	PF02901	Pyruvate formate lyase
AL541_RS10675	PF02508	AL541_RS10675
AL541_RS10680	PF04060	Putative Fe-S cluster
AL541_RS10680	PF14697	4Fe-4S dicluster domain
AL541_RS10685	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL541_RS10685	PF10531	SLBB domain
AL541_RS10685	PF12838	4Fe-4S dicluster domain
AL541_RS10685	PF13375	RnfC Barrel sandwich hybrid domain
AL541_RS10690	PF03116	AL541_RS10690
AL541_RS10695	PF04205	FMN-binding domain
AL541_RS10700	PF02508	AL541_RS10700
AL541_RS10705	PF00633	Helix-hairpin-helix motif
AL541_RS10705	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL541_RS10705	PF10576	Iron-sulfur binding domain of endonuclease III
AL541_RS10710	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS10715	PF10952	AL541_RS10715
AL541_RS10720	PF00691	OmpA family
AL541_RS10730	PF00929	Exonuclease
AL541_RS10735	PF03553	AL541_RS10735
AL541_RS10735	PF13726	AL541_RS10735
AL541_RS10740	PF13743	Thioredoxin
AL541_RS10755	PF00462	Glutaredoxin
AL541_RS10760	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL541_RS10760	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL541_RS10770	PF11993	AL541_RS10770
AL541_RS10775	PF00106	short chain dehydrogenase
AL541_RS10780	PF00171	Aldehyde dehydrogenase family
AL541_RS10780	PF00465	Iron-containing alcohol dehydrogenase
AL541_RS10785	PF01914	AL541_RS10785
AL541_RS10790	PF00520	Ion transport protein
AL541_RS10795	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL541_RS10795	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL541_RS10800	PF03553	AL541_RS10800
AL541_RS10810	PF01627	Hpt domain
AL541_RS10815	PF04245	AL541_RS10815
AL541_RS10820	PF07208	Protein of unknown function (DUF1414)
AL541_RS10825	PF00884	Sulfatase
AL541_RS10825	PF11893	AL541_RS10825
AL541_RS10835	PF00850	Histone deacetylase domain
AL541_RS10840	PF00106	short chain dehydrogenase
AL541_RS10850	PF01131	DNA topoisomerase
AL541_RS10850	PF01751	Toprim domain
AL541_RS10855	PF00881	Nitroreductase family
AL541_RS10860	PF07690	Major Facilitator Superfamily
AL541_RS10865	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL541_RS10865	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS10870	PF01343	Peptidase family S49
AL541_RS10875	PF00710	Asparaginase
AL541_RS10880	PF07023	AL541_RS10880
AL541_RS10885	PF11207	AL541_RS10885
AL541_RS10890	PF01641	SelR domain
AL541_RS10895	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL541_RS10895	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL541_RS10900	PF01263	Aldose 1-epimerase
AL541_RS10905	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS10905	PF17201	AL541_RS10905
AL541_RS10910	PF13847	Methyltransferase domain
AL541_RS10915	PF04187	Protein of unknown function, DUF399
AL541_RS10930	PF00245	Alkaline phosphatase
AL541_RS10935	PF13467	Ribbon-helix-helix domain
AL541_RS10940	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS10945	PF03992	Antibiotic biosynthesis monooxygenase
AL541_RS10950	PF00924	Mechanosensitive ion channel
AL541_RS10955	PF03692	AL541_RS10955
AL541_RS10960	PF04226	AL541_RS10960
AL541_RS10965	PF03692	AL541_RS10965
AL541_RS10970	PF00230	Major intrinsic protein
AL541_RS10975	PF02132	RecR protein
AL541_RS10975	PF13662	Toprim domain
AL541_RS10980	PF02575	YbaB/EbfC DNA-binding family
AL541_RS10985	PF12168	AL541_RS10985
AL541_RS10985	PF12169	DNA polymerase III subunits gamma and tau domain III
AL541_RS10985	PF12170	DNA polymerase III tau subunit V interacting with alpha
AL541_RS10985	PF13177	DNA polymerase III, delta subunit
AL541_RS10990	PF00156	Phosphoribosyl transferase domain
AL541_RS10995	PF04304	AL541_RS10995
AL541_RS11005	PF00072	Response regulator receiver domain
AL541_RS11010	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS11010	PF03466	LysR substrate binding domain
AL541_RS11015	PF00156	Phosphoribosyl transferase domain
AL541_RS11015	PF13522	Glutamine amidotransferase domain
AL541_RS11020	PF02674	AL541_RS11020
AL541_RS11025	PF05036	Sporulation related domain
AL541_RS11030	PF08245	Mur ligase middle domain
AL541_RS11035	PF01039	Carboxyl transferase domain
AL541_RS11045	PF01416	tRNA pseudouridine synthase
AL541_RS11055	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL541_RS11055	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL541_RS11060	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL541_RS11060	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL541_RS11060	PF11890	Domain of unknown function (DUF3410)
AL541_RS11070	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL541_RS11070	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL541_RS11075	PF01266	FAD dependent oxidoreductase
AL541_RS11075	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AL541_RS11080	PF03358	NADPH-dependent FMN reductase
AL541_RS11090	PF08891	AL541_RS11090
AL541_RS11095	PF04315	AL541_RS11095
AL541_RS11105	PF03458	AL541_RS11105
AL541_RS11110	PF01264	Chorismate synthase
AL541_RS11115	PF05175	Methyltransferase small domain
AL541_RS11120	PF01713	Smr domain
AL541_RS11125	PF00300	Histidine phosphatase superfamily (branch 1)
AL541_RS11130	PF00675	Insulinase (Peptidase family M16)
AL541_RS11130	PF05193	Peptidase M16 inactive domain
AL541_RS11130	PF16187	AL541_RS11130
AL541_RS11140	PF00378	Enoyl-CoA hydratase/isomerase family
AL541_RS11140	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL541_RS11140	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL541_RS11145	PF00108	Thiolase, N-terminal domain
AL541_RS11145	PF02803	Thiolase, C-terminal domain
AL541_RS11155	PF04542	Sigma-70 region 2
AL541_RS11155	PF08281	Sigma-70, region 4
AL541_RS11160	PF11859	AL541_RS11160
AL541_RS11165	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL541_RS11170	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL541_RS11175	PF04333	AL541_RS11175
AL541_RS11180	PF14559	Tetratricopeptide repeat
AL541_RS11185	PF03918	Cytochrome C biogenesis protein
AL541_RS11190	PF08534	Redoxin
AL541_RS11195	PF01578	AL541_RS11195
AL541_RS11195	PF16327	AL541_RS11195
AL541_RS11200	PF03100	CcmE
AL541_RS11205	PF04995	AL541_RS11205
AL541_RS11210	PF01578	AL541_RS11210
AL541_RS11215	PF03379	AL541_RS11215
AL541_RS11220	PF00005	ABC transporter
AL541_RS11225	PF10975	AL541_RS11225
AL541_RS11230	PF01584	CheW-like domain
AL541_RS11235	PF01584	CheW-like domain
AL541_RS11240	PF13614	AAA domain
AL541_RS11245	PF00072	Response regulator receiver domain
AL541_RS11245	PF01339	CheB methylesterase
AL541_RS11250	PF01584	CheW-like domain
AL541_RS11250	PF01627	Hpt domain
AL541_RS11250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS11250	PF02895	Signal transducing histidine kinase, homodimeric domain
AL541_RS11255	PF04344	Chemotaxis phosphatase, CheZ
AL541_RS11260	PF00072	Response regulator receiver domain
AL541_RS11265	PF04539	Sigma-70 region 3
AL541_RS11265	PF04542	Sigma-70 region 2
AL541_RS11265	PF04545	Sigma-70, region 4
AL541_RS11270	PF10609	ParA/MinD ATPase like
AL541_RS11275	PF00448	SRP54-type protein, GTPase domain
AL541_RS11280	PF00771	FHIPEP family
AL541_RS11285	PF01312	FlhB HrpN YscU SpaS Family
AL541_RS11290	PF01311	AL541_RS11290
AL541_RS11295	PF01313	AL541_RS11295
AL541_RS11300	PF00813	AL541_RS11300
AL541_RS11305	PF04347	AL541_RS11305
AL541_RS11310	PF01052	Surface presentation of antigens (SPOA)
AL541_RS11315	PF01052	Surface presentation of antigens (SPOA)
AL541_RS11315	PF02154	Flagellar motor switch protein FliM
AL541_RS11320	PF03748	AL541_RS11320
AL541_RS11325	PF02120	Flagellar hook-length control protein FliK
AL541_RS11330	PF07978	NIPSNAP
AL541_RS11335	PF02050	Flagellar FliJ protein
AL541_RS11340	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL541_RS11345	PF02108	AL541_RS11345
AL541_RS11350	PF01706	FliG C-terminal domain
AL541_RS11350	PF14841	FliG middle domain
AL541_RS11350	PF14842	FliG N-terminal domain
AL541_RS11355	PF01514	Secretory protein of YscJ/FliF family
AL541_RS11355	PF08345	AL541_RS11355
AL541_RS11360	PF02049	AL541_RS11360
AL541_RS11365	PF00072	Response regulator receiver domain
AL541_RS11365	PF00158	Sigma-54 interaction domain
AL541_RS11365	PF02954	Bacterial regulatory protein, Fis family
AL541_RS11370	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS11370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS11370	PF13188	PAS domain
AL541_RS11375	PF00158	Sigma-54 interaction domain
AL541_RS11375	PF02954	Bacterial regulatory protein, Fis family
AL541_RS11375	PF06490	AL541_RS11375
AL541_RS11380	PF02561	Flagellar protein FliS
AL541_RS11390	PF02465	AL541_RS11390
AL541_RS11390	PF07195	AL541_RS11390
AL541_RS11390	PF07196	Flagellin hook IN motif
AL541_RS11395	PF03646	FlaG protein
AL541_RS11400	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS11400	PF00700	Bacterial flagellin C-terminal helical region
AL541_RS11400	PF07196	Flagellin hook IN motif
AL541_RS11405	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS11405	PF00700	Bacterial flagellin C-terminal helical region
AL541_RS11405	PF07196	Flagellin hook IN motif
AL541_RS11415	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS11415	PF00700	Bacterial flagellin C-terminal helical region
AL541_RS11415	PF07196	Flagellin hook IN motif
AL541_RS11420	PF04261	Dyp-type peroxidase family
AL541_RS11425	PF11143	AL541_RS11425
AL541_RS11430	PF11169	AL541_RS11430
AL541_RS11435	PF13698	AL541_RS11435
AL541_RS11440	PF09904	Winged helix-turn helix
AL541_RS11445	PF03960	ArsC family
AL541_RS11450	PF01546	Peptidase family M20/M25/M40
AL541_RS11450	PF07687	Peptidase dimerisation domain
AL541_RS11455	PF02557	D-alanyl-D-alanine carboxypeptidase
AL541_RS11460	PF11446	AL541_RS11460
AL541_RS11465	PF06804	NlpB/DapX lipoprotein
AL541_RS11470	PF00701	Dihydrodipicolinate synthetase family
AL541_RS11475	PF13740	ACT domain
AL541_RS11480	PF00578	AhpC/TSA family
AL541_RS11485	PF01594	AL541_RS11485
AL541_RS11490	PF01206	Sulfurtransferase TusA
AL541_RS11495	PF01435	Peptidase family M48
AL541_RS11495	PF14559	Tetratricopeptide repeat
AL541_RS11500	PF03960	ArsC family
AL541_RS11505	PF03358	NADPH-dependent FMN reductase
AL541_RS11510	PF09842	AL541_RS11510
AL541_RS11515	PF09839	AL541_RS11515
AL541_RS11520	PF00860	Permease family
AL541_RS11525	PF14681	Uracil phosphoribosyltransferase
AL541_RS11530	PF00586	AIR synthase related protein, N-terminal domain
AL541_RS11530	PF02769	AIR synthase related protein, C-terminal domain
AL541_RS11535	PF00551	Formyl transferase
AL541_RS11540	PF13230	Glutamine amidotransferases class-II
AL541_RS11545	PF13580	SIS domain
AL541_RS11550	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL541_RS11550	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL541_RS11550	PF09317	AL541_RS11550
AL541_RS11555	PF00916	AL541_RS11555
AL541_RS11555	PF01740	STAS domain
AL541_RS11560	PF13508	Acetyltransferase (GNAT) domain
AL541_RS11565	PF07087	AL541_RS11565
AL541_RS11580	PF00929	Exonuclease
AL541_RS11585	PF00075	RNase H
AL541_RS11590	PF08241	Methyltransferase domain
AL541_RS11595	PF00753	Metallo-beta-lactamase superfamily
AL541_RS11595	PF16123	AL541_RS11595
AL541_RS11600	PF01464	Transglycosylase SLT domain
AL541_RS11600	PF01476	LysM domain
AL541_RS11605	PF06930	AL541_RS11605
AL541_RS11610	PF03372	Endonuclease/Exonuclease/phosphatase family
AL541_RS11615	PF00543	Nitrogen regulatory protein P-II
AL541_RS11620	PF00034	Cytochrome c
AL541_RS11625	PF01171	PP-loop family
AL541_RS11625	PF09179	TilS substrate binding domain
AL541_RS11625	PF11734	TilS substrate C-terminal domain
AL541_RS11630	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AL541_RS11635	PF01336	OB-fold nucleic acid binding domain
AL541_RS11635	PF02811	PHP domain
AL541_RS11635	PF07733	Bacterial DNA polymerase III alpha subunit
AL541_RS11635	PF14579	Helix-hairpin-helix motif
AL541_RS11640	PF01351	Ribonuclease HII
AL541_RS11645	PF02684	AL541_RS11645
AL541_RS11650	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS11650	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AL541_RS11655	PF07977	FabA-like domain
AL541_RS11660	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS11660	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
AL541_RS11660	PF14602	Hexapeptide repeat of succinyl-transferase
AL541_RS11665	PF03938	Outer membrane protein (OmpH-like)
AL541_RS11670	PF01103	Surface antigen
AL541_RS11670	PF07244	Surface antigen variable number repeat
AL541_RS11675	PF02163	Peptidase family M50
AL541_RS11675	PF13180	PDZ domain
AL541_RS11680	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL541_RS11680	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AL541_RS11680	PF13288	DXP reductoisomerase C-terminal domain
AL541_RS11685	PF01148	Cytidylyltransferase family
AL541_RS11690	PF01255	Putative undecaprenyl diphosphate synthase
AL541_RS11695	PF01765	Ribosome recycling factor
AL541_RS11700	PF00696	Amino acid kinase family
AL541_RS11705	PF00889	Elongation factor TS
AL541_RS11710	PF00318	Ribosomal protein S2
AL541_RS11715	PF00557	Metallopeptidase family M24
AL541_RS11720	PF01842	ACT domain
AL541_RS11720	PF01909	Nucleotidyltransferase domain
AL541_RS11720	PF01966	HD domain
AL541_RS11720	PF08335	GlnD PII-uridylyltransferase
AL541_RS11725	PF11944	AL541_RS11725
AL541_RS11730	PF00849	RNA pseudouridylate synthase
AL541_RS11735	PF04287	tRNA pseudouridine synthase C
AL541_RS11740	PF12069	AL541_RS11740
AL541_RS11745	PF11743	AL541_RS11745
AL541_RS11750	PF13302	Acetyltransferase (GNAT) domain
AL541_RS11765	PF02639	AL541_RS11765
AL541_RS11770	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL541_RS11770	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL541_RS11775	PF01370	NAD dependent epimerase/dehydratase family
AL541_RS11780	PF00753	Metallo-beta-lactamase superfamily
AL541_RS11790	PF02655	ATP-grasp domain
AL541_RS11800	PF03806	AL541_RS11800
AL541_RS11805	PF00444	Ribosomal protein L36
AL541_RS11810	PF01197	Ribosomal protein L31
AL541_RS11815	PF01980	Uncharacterised protein family UPF0066
AL541_RS11820	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL541_RS11820	PF03129	Anticodon binding domain
AL541_RS11820	PF04073	Aminoacyl-tRNA editing domain
AL541_RS11825	PF04391	AL541_RS11825
AL541_RS11830	PF06786	AL541_RS11830
AL541_RS11835	PF14056	AL541_RS11835
AL541_RS11840	PF00209	Sodium:neurotransmitter symporter family
AL541_RS11845	PF00704	Glycosyl hydrolases family 18
AL541_RS11850	PF11101	AL541_RS11850
AL541_RS11855	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL541_RS11860	PF00270	DEAD/DEAH box helicase
AL541_RS11860	PF00271	Helicase conserved C-terminal domain
AL541_RS11860	PF16124	AL541_RS11860
AL541_RS11865	PF00817	impB/mucB/samB family
AL541_RS11865	PF11799	impB/mucB/samB family C-terminal domain
AL541_RS11870	PF10982	Protein of unknown function (DUF2789)
AL541_RS11875	PF00072	Response regulator receiver domain
AL541_RS11875	PF00990	GGDEF domain
AL541_RS11880	PF04400	AL541_RS11880
AL541_RS11885	PF02424	ApbE family
AL541_RS11890	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL541_RS11890	PF00175	Oxidoreductase NAD-binding domain
AL541_RS11890	PF00970	Oxidoreductase FAD-binding domain
AL541_RS11895	PF02508	AL541_RS11895
AL541_RS11900	PF02508	AL541_RS11900
AL541_RS11905	PF04205	FMN-binding domain
AL541_RS11910	PF03116	AL541_RS11910
AL541_RS11915	PF05896	AL541_RS11915
AL541_RS11915	PF11973	AL541_RS11915
AL541_RS11925	PF01722	BolA-like protein
AL541_RS11930	PF05175	Methyltransferase small domain
AL541_RS11930	PF08468	Methyltransferase small domain N-terminal
AL541_RS11935	PF03923	AL541_RS11935
AL541_RS11940	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL541_RS11945	PF07690	Major Facilitator Superfamily
AL541_RS11950	PF12973	ChrR Cupin-like domain
AL541_RS11955	PF04542	Sigma-70 region 2
AL541_RS11955	PF04545	Sigma-70, region 4
AL541_RS11960	PF14344	AL541_RS11960
AL541_RS11965	PF02190	ATP-dependent protease La (LON) domain
AL541_RS11975	PF03502	Nucleoside-specific channel-forming protein, Tsx
AL541_RS11980	PF02558	Ketopantoate reductase PanE/ApbA
AL541_RS11980	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL541_RS11985	PF01965	DJ-1/PfpI family
AL541_RS11990	PF00266	Aminotransferase class-V
AL541_RS11995	PF00990	GGDEF domain
AL541_RS12000	PF02657	Fe-S metabolism associated domain
AL541_RS12005	PF00899	ThiF family
AL541_RS12010	PF03562	MltA specific insert domain
AL541_RS12010	PF06725	3D domain
AL541_RS12020	PF11012	AL541_RS12020
AL541_RS12025	PF00583	Acetyltransferase (GNAT) family
AL541_RS12025	PF00696	Amino acid kinase family
AL541_RS12045	PF13538	UvrD-like helicase C-terminal domain
AL541_RS12045	PF13604	AAA domain
AL541_RS12050	PF00580	UvrD/REP helicase N-terminal domain
AL541_RS12050	PF12705	PD-(D/E)XK nuclease superfamily
AL541_RS12050	PF13361	UvrD-like helicase C-terminal domain
AL541_RS12060	PF04257	Exodeoxyribonuclease V, gamma subunit
AL541_RS12065	PF00884	Sulfatase
AL541_RS12065	PF11893	AL541_RS12065
AL541_RS12070	PF03595	Voltage-dependent anion channel
AL541_RS12075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS12075	PF03466	LysR substrate binding domain
AL541_RS12080	PF07130	YebG protein
AL541_RS12090	PF14412	AL541_RS12090
AL541_RS12095	PF14602	Hexapeptide repeat of succinyl-transferase
AL541_RS12095	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
AL541_RS12100	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL541_RS12105	PF07690	Major Facilitator Superfamily
AL541_RS12115	PF00230	Major intrinsic protein
AL541_RS12120	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL541_RS12120	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL541_RS12125	PF00455	AL541_RS12125
AL541_RS12125	PF08220	DeoR-like helix-turn-helix domain
AL541_RS12130	PF01266	FAD dependent oxidoreductase
AL541_RS12130	PF16901	AL541_RS12130
AL541_RS12135	PF01544	CorA-like Mg2+ transporter protein
AL541_RS12140	PF05940	AL541_RS12140
AL541_RS12145	PF06094	AIG2-like family
AL541_RS12150	PF13505	Outer membrane protein beta-barrel domain
AL541_RS12155	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS12155	PF13377	Periplasmic binding protein-like domain
AL541_RS12160	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS12160	PF03466	LysR substrate binding domain
AL541_RS12165	PF02417	AL541_RS12165
AL541_RS12170	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS12185	PF03412	Peptidase C39 family
AL541_RS12195	PF13557	AL541_RS12195
AL541_RS12200	PF00501	AMP-binding enzyme
AL541_RS12205	PF06568	AL541_RS12205
AL541_RS12210	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS12210	PF03466	LysR substrate binding domain
AL541_RS12215	PF00009	Elongation factor Tu GTP binding domain
AL541_RS12215	PF00679	Elongation factor G C-terminus
AL541_RS12215	PF03144	Elongation factor Tu domain 2
AL541_RS12215	PF03764	Elongation factor G, domain IV
AL541_RS12215	PF14492	Elongation Factor G, domain II
AL541_RS12220	PF13481	AAA domain
AL541_RS12220	PF13541	Subunit ChlI of Mg-chelatase
AL541_RS12225	PF07238	PilZ domain
AL541_RS12230	PF00702	haloacid dehalogenase-like hydrolase
AL541_RS12235	PF10144	AL541_RS12235
AL541_RS12240	PF01048	Phosphorylase superfamily
AL541_RS12245	PF01676	Metalloenzyme superfamily
AL541_RS12250	PF00591	Glycosyl transferase family, a/b domain
AL541_RS12250	PF02885	Glycosyl transferase family, helical bundle domain
AL541_RS12250	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AL541_RS12255	PF01791	DeoC/LacD family aldolase
AL541_RS12260	PF01773	Na+ dependent nucleoside transporter N-terminus
AL541_RS12260	PF07662	Na+ dependent nucleoside transporter C-terminus
AL541_RS12260	PF07670	Nucleoside recognition
AL541_RS12265	PF01026	TatD related DNase
AL541_RS12270	PF17320	AL541_RS12270
AL541_RS12275	PF00009	Elongation factor Tu GTP binding domain
AL541_RS12275	PF03144	Elongation factor Tu domain 2
AL541_RS12275	PF16658	AL541_RS12275
AL541_RS12280	PF00583	Acetyltransferase (GNAT) family
AL541_RS12285	PF03603	DNA polymerase III psi subunit
AL541_RS12295	PF13527	Acetyltransferase (GNAT) domain
AL541_RS12300	PF02036	SCP-2 sterol transfer family
AL541_RS12310	PF00563	EAL domain
AL541_RS12310	PF00990	GGDEF domain
AL541_RS12310	PF08448	PAS fold
AL541_RS12310	PF13188	PAS domain
AL541_RS12315	PF01136	AL541_RS12315
AL541_RS12320	PF01136	AL541_RS12320
AL541_RS12325	PF01554	MatE
AL541_RS12330	PF01047	MarR family
AL541_RS12340	PF00013	KH domain
AL541_RS12340	PF00575	S1 RNA binding domain
AL541_RS12340	PF01138	3' exoribonuclease family, domain 1
AL541_RS12340	PF03725	3' exoribonuclease family, domain 2
AL541_RS12340	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AL541_RS12345	PF00312	Ribosomal protein S15
AL541_RS12350	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AL541_RS12350	PF09157	Pseudouridine synthase II TruB, C-terminal
AL541_RS12350	PF16198	AL541_RS12350
AL541_RS12355	PF02033	Ribosome-binding factor A
AL541_RS12360	PF00009	Elongation factor Tu GTP binding domain
AL541_RS12360	PF03144	Elongation factor Tu domain 2
AL541_RS12360	PF04760	Translation initiation factor IF-2, N-terminal region
AL541_RS12360	PF08364	AL541_RS12360
AL541_RS12360	PF11987	Translation-initiation factor 2
AL541_RS12365	PF08529	NusA N-terminal domain
AL541_RS12365	PF13184	NusA-like KH domain
AL541_RS12365	PF14520	Helix-hairpin-helix domain
AL541_RS12370	PF02576	Uncharacterised BCR, YhbC family COG0779
AL541_RS12370	PF17384	AL541_RS12370
AL541_RS12385	PF03840	Preprotein translocase SecG subunit
AL541_RS12395	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL541_RS12395	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL541_RS12395	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL541_RS12395	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL541_RS12400	PF00809	Pterin binding enzyme
AL541_RS12405	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS12405	PF01434	Peptidase family M41
AL541_RS12405	PF06480	FtsH Extracellular
AL541_RS12410	PF01728	FtsJ-like methyltransferase
AL541_RS12415	PF01985	CRS1 / YhbY (CRM) domain
AL541_RS12420	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL541_RS12420	PF03449	Transcription elongation factor, N-terminal
AL541_RS12425	PF13609	Gram-negative porin
AL541_RS12430	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AL541_RS12435	PF01769	Divalent cation transporter
AL541_RS12440	PF00579	tRNA synthetases class I (W and Y)
AL541_RS12440	PF01479	S4 domain
AL541_RS12445	PF01551	Peptidase family M23
AL541_RS12445	PF08525	AL541_RS12445
AL541_RS12450	PF00873	AcrB/AcrD/AcrF family
AL541_RS12455	PF16576	AL541_RS12455
AL541_RS12460	PF01521	Iron-sulphur cluster biosynthesis
AL541_RS12465	PF00202	Aminotransferase class-III
AL541_RS12470	PF01594	AL541_RS12470
AL541_RS12475	PF05175	Methyltransferase small domain
AL541_RS12475	PF08468	Methyltransferase small domain N-terminal
AL541_RS12480	PF00072	Response regulator receiver domain
AL541_RS12480	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS12480	PF00672	HAMP domain
AL541_RS12480	PF00989	PAS fold
AL541_RS12480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS12485	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS12490	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS12495	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS12500	PF00005	ABC transporter
AL541_RS12500	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS12505	PF00005	ABC transporter
AL541_RS12505	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS12510	PF00759	Glycosyl hydrolase family 9
AL541_RS12510	PF02927	N-terminal ig-like domain of cellulase
AL541_RS12515	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AL541_RS12520	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL541_RS12520	PF02838	Glycosyl hydrolase family 20, domain 2
AL541_RS12525	PF06165	Glycosyltransferase family 36
AL541_RS12525	PF17167	AL541_RS12525
AL541_RS12530	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL541_RS12530	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL541_RS12530	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL541_RS12530	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL541_RS12535	PF00005	ABC transporter
AL541_RS12535	PF08402	TOBE domain
AL541_RS12540	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS12545	PF13343	Bacterial extracellular solute-binding protein
AL541_RS12550	PF00909	Ammonium Transporter Family
AL541_RS12555	PF00543	Nitrogen regulatory protein P-II
AL541_RS12560	PF06062	AL541_RS12560
AL541_RS12565	PF00330	Aconitase family (aconitate hydratase)
AL541_RS12565	PF06434	Aconitate hydratase 2 N-terminus
AL541_RS12565	PF11791	Aconitate B N-terminal domain
AL541_RS12570	PF01734	Patatin-like phospholipase
AL541_RS12570	PF07244	Surface antigen variable number repeat
AL541_RS12575	PF00905	Penicillin binding protein transpeptidase domain
AL541_RS12575	PF00912	Transglycosylase
AL541_RS12575	PF14814	Bifunctional transglycosylase second domain
AL541_RS12580	PF00270	DEAD/DEAH box helicase
AL541_RS12580	PF00271	Helicase conserved C-terminal domain
AL541_RS12580	PF04408	Helicase associated domain (HA2)
AL541_RS12580	PF08482	AL541_RS12580
AL541_RS12585	PF03749	Sugar fermentation stimulation protein
AL541_RS12590	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL541_RS12595	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL541_RS12600	PF01743	Poly A polymerase head domain
AL541_RS12600	PF12626	Polymerase A arginine-rich C-terminus
AL541_RS12600	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL541_RS12605	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL541_RS12610	PF02548	Ketopantoate hydroxymethyltransferase
AL541_RS12615	PF02569	Pantoate-beta-alanine ligase
AL541_RS12620	PF03279	AL541_RS12620
AL541_RS12630	PF01061	AL541_RS12630
AL541_RS12635	PF00005	ABC transporter
AL541_RS12640	PF00916	AL541_RS12640
AL541_RS12640	PF01740	STAS domain
AL541_RS12645	PF00484	Carbonic anhydrase
AL541_RS12650	PF00156	Phosphoribosyl transferase domain
AL541_RS12655	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS12660	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL541_RS12660	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS12665	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL541_RS12665	PF00364	Biotin-requiring enzyme
AL541_RS12665	PF02817	e3 binding domain
AL541_RS12670	PF00456	Transketolase, thiamine diphosphate binding domain
AL541_RS12675	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS12675	PF07729	FCD domain
AL541_RS12680	PF01510	N-acetylmuramoyl-L-alanine amidase
AL541_RS12685	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AL541_RS12685	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AL541_RS12690	PF00114	Pilin (bacterial filament)
AL541_RS12690	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS12695	PF00437	Type II/IV secretion system protein
AL541_RS12695	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL541_RS12700	PF00482	Type II secretion system (T2SS), protein F
AL541_RS12705	PF01478	Type IV leader peptidase family
AL541_RS12705	PF06750	AL541_RS12705
AL541_RS12710	PF01121	Dephospho-CoA kinase
AL541_RS12715	PF07072	Protein of unknown function (DUF1342)
AL541_RS12720	PF03884	Domain of unknown function (DUF329)
AL541_RS12725	PF01245	Ribosomal protein L19
AL541_RS12730	PF01746	tRNA (Guanine-1)-methyltransferase
AL541_RS12735	PF01782	RimM N-terminal domain
AL541_RS12735	PF05239	PRC-barrel domain
AL541_RS12740	PF00886	Ribosomal protein S16
AL541_RS12745	PF00448	SRP54-type protein, GTPase domain
AL541_RS12745	PF02881	SRP54-type protein, helical bundle domain
AL541_RS12745	PF02978	Signal peptide binding domain
AL541_RS12750	PF01578	AL541_RS12750
AL541_RS12755	PF00571	CBS domain
AL541_RS12755	PF01595	AL541_RS12755
AL541_RS12755	PF03471	Transporter associated domain
AL541_RS12760	PF02664	S-Ribosylhomocysteinase (LuxS)
AL541_RS12770	PF04262	Glutamate-cysteine ligase
AL541_RS12775	PF00675	Insulinase (Peptidase family M16)
AL541_RS12775	PF05193	Peptidase M16 inactive domain
AL541_RS12780	PF09335	AL541_RS12780
AL541_RS12785	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS12785	PF13602	Zinc-binding dehydrogenase
AL541_RS12790	PF03977	AL541_RS12790
AL541_RS12795	PF00364	Biotin-requiring enzyme
AL541_RS12795	PF00682	HMGL-like
AL541_RS12795	PF02436	Conserved carboxylase domain
AL541_RS12800	PF04277	AL541_RS12800
AL541_RS12855	PF02599	Global regulator protein family
AL541_RS12860	PF00696	Amino acid kinase family
AL541_RS12865	PF01411	tRNA synthetases class II (A)
AL541_RS12865	PF02272	DHHA1 domain
AL541_RS12865	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL541_RS12870	PF02631	RecX family
AL541_RS12875	PF00154	recA bacterial DNA recombination protein
AL541_RS12880	PF02464	Competence-damaged protein
AL541_RS12885	PF00488	MutS domain V
AL541_RS12885	PF01624	MutS domain I
AL541_RS12885	PF05188	MutS domain II
AL541_RS12885	PF05190	MutS family domain IV
AL541_RS12885	PF05192	MutS domain III
AL541_RS12890	PF00140	Sigma-70 factor, region 1
AL541_RS12890	PF04539	Sigma-70 region 3
AL541_RS12890	PF04542	Sigma-70 region 2
AL541_RS12890	PF04545	Sigma-70, region 4
AL541_RS12895	PF01476	LysM domain
AL541_RS12895	PF01551	Peptidase family M23
AL541_RS12900	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AL541_RS12905	PF01975	Survival protein SurE
AL541_RS12910	PF01142	tRNA pseudouridine synthase D (TruD)
AL541_RS12915	PF02542	YgbB family
AL541_RS12920	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AL541_RS12925	PF04977	Septum formation initiator
AL541_RS12930	PF00113	Enolase, C-terminal TIM barrel domain
AL541_RS12930	PF03952	Enolase, N-terminal domain
AL541_RS12935	PF00117	Glutamine amidotransferase class-I
AL541_RS12935	PF06418	CTP synthase N-terminus
AL541_RS12940	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL541_RS12945	PF02824	TGS domain
AL541_RS12945	PF04607	Region found in RelA / SpoT proteins
AL541_RS12945	PF13291	ACT domain
AL541_RS12945	PF13328	HD domain
AL541_RS12955	PF01938	TRAM domain
AL541_RS12955	PF05958	tRNA (Uracil-5-)-methyltransferase
AL541_RS12965	PF00072	Response regulator receiver domain
AL541_RS12965	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS12965	PF01627	Hpt domain
AL541_RS12965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS12965	PF09984	AL541_RS12965
AL541_RS12970	PF01648	4'-phosphopantetheinyl transferase superfamily
AL541_RS12975	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AL541_RS12980	PF02565	Recombination protein O C terminal
AL541_RS12980	PF11967	Recombination protein O N terminal
AL541_RS12985	PF01926	50S ribosome-binding GTPase
AL541_RS12985	PF07650	KH domain
AL541_RS12990	PF00035	Double-stranded RNA binding motif
AL541_RS12990	PF14622	Ribonuclease-III-like
AL541_RS12995	PF00717	Peptidase S24-like
AL541_RS12995	PF10502	Signal peptidase, peptidase S26
AL541_RS13000	PF00009	Elongation factor Tu GTP binding domain
AL541_RS13000	PF00679	Elongation factor G C-terminus
AL541_RS13000	PF03144	Elongation factor Tu domain 2
AL541_RS13000	PF06421	GTP-binding protein LepA C-terminus
AL541_RS13005	PF04246	AL541_RS13005
AL541_RS13010	PF03888	MucB/RseB family
AL541_RS13010	PF17188	AL541_RS13010
AL541_RS13015	PF03872	Anti sigma-E protein RseA, N-terminal domain
AL541_RS13015	PF03873	Anti sigma-E protein RseA, C-terminal domain
AL541_RS13020	PF04542	Sigma-70 region 2
AL541_RS13020	PF08281	Sigma-70, region 4
AL541_RS13030	PF00890	FAD binding domain
AL541_RS13030	PF02910	Fumarate reductase flavoprotein C-term
AL541_RS13040	PF03937	Flavinator of succinate dehydrogenase
AL541_RS13045	PF01571	Aminomethyltransferase folate-binding domain
AL541_RS13050	PF04073	Aminoacyl-tRNA editing domain
AL541_RS13055	PF06526	Protein of unknown function (DUF1107)
AL541_RS13060	PF01494	FAD binding domain
AL541_RS13065	PF01494	FAD binding domain
AL541_RS13070	PF03695	Uncharacterised protein family (UPF0149)
AL541_RS13080	PF05164	Cell division protein ZapA
AL541_RS13090	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AL541_RS13095	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AL541_RS13100	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL541_RS13100	PF01842	ACT domain
AL541_RS13100	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL541_RS13105	PF04402	Protein of unknown function (DUF541)
AL541_RS13110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS13110	PF03466	LysR substrate binding domain
AL541_RS13115	PF01810	AL541_RS13115
AL541_RS13120	PF04073	Aminoacyl-tRNA editing domain
AL541_RS13125	PF00924	Mechanosensitive ion channel
AL541_RS13125	PF05552	Conserved TM helix
AL541_RS13130	PF01116	Fructose-bisphosphate aldolase class-II
AL541_RS13135	PF00162	Phosphoglycerate kinase
AL541_RS13140	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL541_RS13140	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL541_RS13145	PF00593	TonB dependent receptor
AL541_RS13145	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS13150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS13150	PF03466	LysR substrate binding domain
AL541_RS13155	PF00456	Transketolase, thiamine diphosphate binding domain
AL541_RS13155	PF02779	Transketolase, pyrimidine binding domain
AL541_RS13155	PF02780	Transketolase, C-terminal domain
AL541_RS13165	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AL541_RS13165	PF02772	S-adenosylmethionine synthetase, central domain
AL541_RS13165	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AL541_RS13170	PF09955	AL541_RS13170
AL541_RS13175	PF10263	AL541_RS13175
AL541_RS13175	PF17283	AL541_RS13175
AL541_RS13180	PF04231	Endonuclease I
AL541_RS13185	PF04452	RNA methyltransferase
AL541_RS13190	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL541_RS13190	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL541_RS13195	PF02622	Uncharacterized ACR, COG1678
AL541_RS13200	PF03652	Uncharacterised protein family (UPF0081)
AL541_RS13205	PF00437	Type II/IV secretion system protein
AL541_RS13210	PF00437	Type II/IV secretion system protein
AL541_RS13215	PF01168	Alanine racemase, N-terminal domain
AL541_RS13220	PF03807	NADP oxidoreductase coenzyme F420-dependent
AL541_RS13220	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AL541_RS13225	PF02325	AL541_RS13225
AL541_RS13230	PF02594	Uncharacterised ACR, YggU family COG1872
AL541_RS13235	PF14467	Domain of unknown function (DUF4426)
AL541_RS13240	PF01725	Ham1 family
AL541_RS13245	PF04055	Radical SAM superfamily
AL541_RS13245	PF06969	HemN C-terminal domain
AL541_RS13250	PF04960	Glutaminase
AL541_RS13255	PF01170	Putative RNA methylase family UPF0020
AL541_RS13260	PF02390	Putative methyltransferase
AL541_RS13265	PF00633	Helix-hairpin-helix motif
AL541_RS13265	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL541_RS13265	PF10576	Iron-sulfur binding domain of endonuclease III
AL541_RS13265	PF14815	NUDIX domain
AL541_RS13270	PF04362	Bacterial Fe(2+) trafficking
AL541_RS13275	PF01464	Transglycosylase SLT domain
AL541_RS13275	PF11873	Domain of unknown function (DUF3393)
AL541_RS13315	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS13315	PF17200	AL541_RS13315
AL541_RS13350	PF00171	Aldehyde dehydrogenase family
AL541_RS13395	PF01966	HD domain
AL541_RS13395	PF11871	AL541_RS13395
AL541_RS13400	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS13400	PF13377	Periplasmic binding protein-like domain
AL541_RS13405	PF04794	YdjC-like protein
AL541_RS13410	PF02056	Family 4 glycosyl hydrolase
AL541_RS13410	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL541_RS13415	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AL541_RS13420	PF02378	Phosphotransferase system, EIIC
AL541_RS13425	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS13430	PF01522	Polysaccharide deacetylase
AL541_RS13435	PF01420	Type I restriction modification DNA specificity domain
AL541_RS13435	PF02384	N-6 DNA Methylase
AL541_RS13470	PF00589	Phage integrase family
AL541_RS13485	PF08220	DeoR-like helix-turn-helix domain
AL541_RS13485	PF13280	AL541_RS13485
AL541_RS13490	PF10980	Protein of unknown function (DUF2787)
AL541_RS13505	PF00589	Phage integrase family
AL541_RS13505	PF13356	Domain of unknown function (DUF4102)
AL541_RS13515	PF05488	PAAR motif
AL541_RS13515	PF13930	DNA/RNA non-specific endonuclease
AL541_RS13525	PF00106	short chain dehydrogenase
AL541_RS13530	PF10011	Predicted membrane protein (DUF2254)
AL541_RS13535	PF06271	AL541_RS13535
AL541_RS13540	PF03739	AL541_RS13540
AL541_RS13545	PF03739	AL541_RS13545
AL541_RS13550	PF00883	Cytosol aminopeptidase family, catalytic domain
AL541_RS13550	PF02789	Cytosol aminopeptidase family, N-terminal domain
AL541_RS13555	PF04364	DNA polymerase III chi subunit, HolC
AL541_RS13560	PF00133	tRNA synthetases class I (I, L, M and V)
AL541_RS13560	PF08264	Anticodon-binding domain of tRNA
AL541_RS13560	PF10458	Valyl tRNA synthetase tRNA binding arm
AL541_RS13565	PF09834	AL541_RS13565
AL541_RS13570	PF00583	Acetyltransferase (GNAT) family
AL541_RS13570	PF12802	MarR family
AL541_RS13580	PF06877	Regulator of ribonuclease activity B
AL541_RS13585	PF02274	Amidinotransferase
AL541_RS13590	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL541_RS13590	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL541_RS13600	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL541_RS13600	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL541_RS13605	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
AL541_RS13605	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
AL541_RS13610	PF01042	Endoribonuclease L-PSP
AL541_RS13615	PF01553	Acyltransferase
AL541_RS13620	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL541_RS13625	PF01722	BolA-like protein
AL541_RS13630	PF13466	STAS domain
AL541_RS13635	PF05494	Toluene tolerance, Ttg2
AL541_RS13640	PF02470	AL541_RS13640
AL541_RS13645	PF02405	AL541_RS13645
AL541_RS13650	PF00005	ABC transporter
AL541_RS13655	PF01699	Sodium/calcium exchanger protein
AL541_RS13660	PF00571	CBS domain
AL541_RS13660	PF01380	SIS domain
AL541_RS13665	PF06835	Lipopolysaccharide-assembly, LptC-related
AL541_RS13670	PF03968	OstA-like protein
AL541_RS13675	PF00005	ABC transporter
AL541_RS13675	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL541_RS13680	PF00309	AL541_RS13680
AL541_RS13680	PF04552	Sigma-54, DNA binding domain
AL541_RS13680	PF04963	Sigma-54 factor, core binding domain
AL541_RS13685	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL541_RS13690	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS13695	PF03668	AL541_RS13695
AL541_RS13700	PF00381	PTS HPr component phosphorylation site
AL541_RS13705	PF00571	CBS domain
AL541_RS13705	PF01769	Divalent cation transporter
AL541_RS13705	PF03448	MgtE intracellular N domain
AL541_RS13710	PF01523	Putative modulator of DNA gyrase
AL541_RS13715	PF04751	Protein of unknown function (DUF615)
AL541_RS13720	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL541_RS13720	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL541_RS13725	PF00849	RNA pseudouridylate synthase
AL541_RS13735	PF00176	SNF2 family N-terminal domain
AL541_RS13735	PF00271	Helicase conserved C-terminal domain
AL541_RS13735	PF12137	RNA polymerase recycling family C-terminal
AL541_RS13740	PF02562	PhoH-like protein
AL541_RS13740	PF13638	PIN domain
AL541_RS13745	PF01523	Putative modulator of DNA gyrase
AL541_RS13750	PF00795	Carbon-nitrogen hydrolase
AL541_RS13755	PF13116	AL541_RS13755
AL541_RS13755	PF13502	AL541_RS13755
AL541_RS13760	PF00575	S1 RNA binding domain
AL541_RS13760	PF10150	Ribonuclease E/G family
AL541_RS13765	PF02545	Maf-like protein
AL541_RS13770	PF04093	AL541_RS13770
AL541_RS13775	PF04085	rod shape-determining protein MreC
AL541_RS13780	PF06723	MreB/Mbl protein
AL541_RS13795	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS13800	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS13815	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS13825	PF00482	Type II secretion system (T2SS), protein F
AL541_RS13830	PF00437	Type II/IV secretion system protein
AL541_RS13830	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL541_RS13840	PF13401	AAA domain
AL541_RS13845	PF00263	AL541_RS13845
AL541_RS13845	PF07655	AL541_RS13845
AL541_RS13855	PF04612	Type II secretion system (T2SS), protein M
AL541_RS13865	PF00563	EAL domain
AL541_RS13865	PF00990	GGDEF domain
AL541_RS13865	PF17157	AL541_RS13865
AL541_RS13870	PF00436	Single-strand binding protein family
AL541_RS13875	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS13880	PF00483	Nucleotidyl transferase
AL541_RS13885	PF00005	ABC transporter
AL541_RS13890	PF04932	AL541_RS13890
AL541_RS13890	PF11846	AL541_RS13890
AL541_RS13890	PF15864	AL541_RS13890
AL541_RS13895	PF00266	Aminotransferase class-V
AL541_RS13905	PF00696	Amino acid kinase family
AL541_RS13910	PF00809	Pterin binding enzyme
AL541_RS13910	PF02310	B12 binding domain
AL541_RS13910	PF02574	Homocysteine S-methyltransferase
AL541_RS13910	PF02607	B12 binding domain
AL541_RS13910	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AL541_RS13915	PF00999	Sodium/hydrogen exchanger family
AL541_RS13975	PF01507	Phosphoadenosine phosphosulfate reductase family
AL541_RS13980	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL541_RS13980	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL541_RS13985	PF00175	Oxidoreductase NAD-binding domain
AL541_RS13985	PF00258	Flavodoxin
AL541_RS13985	PF00667	FAD binding domain
AL541_RS13995	PF13505	Outer membrane protein beta-barrel domain
AL541_RS14000	PF09583	AL541_RS14000
AL541_RS14005	PF01207	Dihydrouridine synthase (Dus)
AL541_RS14010	PF01475	Ferric uptake regulator family
AL541_RS14015	PF13690	Chemotaxis phosphatase CheX
AL541_RS14020	PF00342	Phosphoglucose isomerase
AL541_RS14025	PF01894	Uncharacterised protein family UPF0047
AL541_RS14030	PF00842	Alanine racemase, C-terminal domain
AL541_RS14030	PF01168	Alanine racemase, N-terminal domain
AL541_RS14035	PF00772	DnaB-like helicase N terminal domain
AL541_RS14035	PF03796	DnaB-like helicase C terminal domain
AL541_RS14040	PF04338	Protein of unknown function, DUF481
AL541_RS14045	PF01281	Ribosomal protein L9, N-terminal domain
AL541_RS14045	PF03948	Ribosomal protein L9, C-terminal domain
AL541_RS14050	PF01084	Ribosomal protein S18
AL541_RS14055	PF00436	Single-strand binding protein family
AL541_RS14060	PF01250	Ribosomal protein S6
AL541_RS14065	PF00834	Ribulose-phosphate 3 epimerase family
AL541_RS14070	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AL541_RS14075	PF05036	Sporulation related domain
AL541_RS14075	PF13401	AAA domain
AL541_RS14080	PF01761	3-dehydroquinate synthase
AL541_RS14085	PF01202	Shikimate kinase
AL541_RS14090	PF00263	AL541_RS14090
AL541_RS14090	PF03958	Bacterial type II/III secretion system short domain
AL541_RS14095	PF04351	Pilus assembly protein, PilP
AL541_RS14100	PF04350	Pilus assembly protein, PilO
AL541_RS14105	PF05137	AL541_RS14105
AL541_RS14110	PF11104	Type IV pilus assembly protein PilM;
AL541_RS14115	PF00905	Penicillin binding protein transpeptidase domain
AL541_RS14115	PF00912	Transglycosylase
AL541_RS14115	PF17092	AL541_RS14115
AL541_RS14120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS14120	PF03466	LysR substrate binding domain
AL541_RS14125	PF00462	Glutaredoxin
AL541_RS14125	PF08534	Redoxin
AL541_RS14130	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL541_RS14130	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS14135	PF12292	AL541_RS14135
AL541_RS14140	PF00206	Lyase
AL541_RS14140	PF00583	Acetyltransferase (GNAT) family
AL541_RS14140	PF14698	Argininosuccinate lyase C-terminal
AL541_RS14145	PF00764	Arginosuccinate synthase
AL541_RS14150	PF00696	Amino acid kinase family
AL541_RS14155	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL541_RS14155	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL541_RS14160	PF01546	Peptidase family M20/M25/M40
AL541_RS14160	PF07687	Peptidase dimerisation domain
AL541_RS14165	PF00311	Phosphoenolpyruvate carboxylase
AL541_RS14170	PF03551	Transcriptional regulator PadR-like family
AL541_RS14170	PF10400	Virulence activator alpha C-term
AL541_RS14175	PF02219	Methylenetetrahydrofolate reductase
AL541_RS14180	PF00696	Amino acid kinase family
AL541_RS14180	PF00742	Homoserine dehydrogenase
AL541_RS14180	PF03447	Homoserine dehydrogenase, NAD binding domain
AL541_RS14185	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL541_RS14190	PF01340	Met Apo-repressor, MetJ
AL541_RS14195	PF00390	Malic enzyme, N-terminal domain
AL541_RS14195	PF03949	Malic enzyme, NAD binding domain
AL541_RS14200	PF00210	Ferritin-like domain
AL541_RS14205	PF04324	BFD-like [2Fe-2S] binding domain
AL541_RS14210	PF00009	Elongation factor Tu GTP binding domain
AL541_RS14210	PF03143	Elongation factor Tu C-terminal domain
AL541_RS14210	PF03144	Elongation factor Tu domain 2
AL541_RS14215	PF00009	Elongation factor Tu GTP binding domain
AL541_RS14215	PF00679	Elongation factor G C-terminus
AL541_RS14215	PF03144	Elongation factor Tu domain 2
AL541_RS14215	PF03764	Elongation factor G, domain IV
AL541_RS14215	PF14492	Elongation Factor G, domain II
AL541_RS14220	PF00177	Ribosomal protein S7p/S5e
AL541_RS14225	PF00164	Ribosomal protein S12/S23
AL541_RS14230	PF04077	DsrH like protein
AL541_RS14235	PF02635	DsrE/DsrF-like family
AL541_RS14240	PF02635	DsrE/DsrF-like family
AL541_RS14245	PF08348	AL541_RS14245
AL541_RS14245	PF13309	AL541_RS14245
AL541_RS14250	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL541_RS14250	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL541_RS14255	PF13360	PQQ-like domain
AL541_RS14260	PF04102	SlyX
AL541_RS14265	PF01112	Asparaginase
AL541_RS14275	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL541_RS14280	PF09526	AL541_RS14280
AL541_RS14285	PF00999	Sodium/hydrogen exchanger family
AL541_RS14285	PF02254	TrkA-N domain
AL541_RS14290	PF02525	Flavodoxin-like fold
AL541_RS14295	PF00005	ABC transporter
AL541_RS14295	PF12848	ABC transporter
AL541_RS14300	PF09523	AL541_RS14300
AL541_RS14305	PF00561	alpha/beta hydrolase fold
AL541_RS14310	PF06794	Uncharacterised protein family (UPF0270)
AL541_RS14315	PF00485	Phosphoribulokinase / Uridine kinase family
AL541_RS14320	PF00027	Cyclic nucleotide-binding domain
AL541_RS14320	PF00325	Bacterial regulatory proteins, crp family
AL541_RS14325	PF07063	Domain of unknown function (DUF1338)
AL541_RS14330	PF00171	Aldehyde dehydrogenase family
AL541_RS14335	PF04958	Arginine N-succinyltransferase beta subunit
AL541_RS14340	PF00202	Aminotransferase class-III
AL541_RS14345	PF00117	Glutamine amidotransferase class-I
AL541_RS14350	PF00932	Lamin Tail Domain
AL541_RS14350	PF03372	Endonuclease/Exonuclease/phosphatase family
AL541_RS14360	PF00579	tRNA synthetases class I (W and Y)
AL541_RS14365	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS14370	PF00588	SpoU rRNA Methylase family
AL541_RS14370	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL541_RS14375	PF00575	S1 RNA binding domain
AL541_RS14375	PF00773	RNB domain
AL541_RS14375	PF08206	Ribonuclease B OB domain
AL541_RS14375	PF08461	Ribonuclease R winged-helix domain
AL541_RS14380	PF02082	Transcriptional regulator
AL541_RS14385	PF00042	Globin
AL541_RS14385	PF00175	Oxidoreductase NAD-binding domain
AL541_RS14385	PF00970	Oxidoreductase FAD-binding domain
AL541_RS14390	PF08238	Sel1 repeat
AL541_RS14400	PF00709	Adenylosuccinate synthetase
AL541_RS14405	PF09838	AL541_RS14405
AL541_RS14410	PF01145	SPFH domain / Band 7 family
AL541_RS14415	PF01145	SPFH domain / Band 7 family
AL541_RS14415	PF12221	AL541_RS14415
AL541_RS14420	PF01926	50S ribosome-binding GTPase
AL541_RS14420	PF13167	AL541_RS14420
AL541_RS14420	PF16360	AL541_RS14420
AL541_RS14425	PF17209	AL541_RS14425
AL541_RS14430	PF01715	IPP transferase
AL541_RS14435	PF01119	DNA mismatch repair protein, C-terminal domain
AL541_RS14435	PF08676	MutL C terminal dimerisation domain
AL541_RS14435	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS14440	PF01476	LysM domain
AL541_RS14440	PF01520	N-acetylmuramoyl-L-alanine amidase
AL541_RS14440	PF11741	AMIN domain
AL541_RS14445	PF02367	Uncharacterised P-loop hydrolase UPF0079
AL541_RS14455	PF08331	AL541_RS14455
AL541_RS14455	PF13484	AL541_RS14455
AL541_RS14520	PF00929	Exonuclease
AL541_RS14525	PF03193	Protein of unknown function, DUF258
AL541_RS14530	PF02666	AL541_RS14530
AL541_RS14535	PF00939	Sodium:sulfate symporter transmembrane region
AL541_RS14540	PF00892	EamA-like transporter family
AL541_RS14545	PF01676	Metalloenzyme superfamily
AL541_RS14545	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AL541_RS14550	PF00581	Rhodanese-like domain
AL541_RS14555	PF02556	Preprotein translocase subunit SecB
AL541_RS14560	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AL541_RS14560	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AL541_RS14565	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS14565	PF06426	Serine acetyltransferase, N-terminal
AL541_RS14570	PF01551	Peptidase family M23
AL541_RS14580	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS14580	PF13972	Bacterial transcriptional repressor
AL541_RS14585	PF04892	AL541_RS14585
AL541_RS14590	PF00152	tRNA synthetases class II (D, K and N)
AL541_RS14595	PF00890	FAD binding domain
AL541_RS14595	PF02910	Fumarate reductase flavoprotein C-term
AL541_RS14600	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL541_RS14600	PF13183	4Fe-4S dicluster domain
AL541_RS14605	PF02300	Fumarate reductase subunit C
AL541_RS14610	PF02313	Fumarate reductase subunit D
AL541_RS14615	PF01145	SPFH domain / Band 7 family
AL541_RS14620	PF01132	Elongation factor P (EF-P) OB domain
AL541_RS14620	PF08207	Elongation factor P (EF-P) KOW-like domain
AL541_RS14620	PF09285	Elongation factor P, C-terminal
AL541_RS14625	PF04055	Radical SAM superfamily
AL541_RS14625	PF13353	4Fe-4S single cluster domain
AL541_RS14630	PF02308	AL541_RS14630
AL541_RS14640	PF00118	TCP-1/cpn60 chaperonin family
AL541_RS14645	PF00166	Chaperonin 10 Kd subunit
AL541_RS14650	PF01554	MatE
AL541_RS14655	PF00365	Phosphofructokinase
AL541_RS14660	PF01545	Cation efflux family
AL541_RS14660	PF16916	AL541_RS14660
AL541_RS14665	PF07813	LTXXQ motif family protein
AL541_RS14670	PF00072	Response regulator receiver domain
AL541_RS14670	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS14675	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS14675	PF00672	HAMP domain
AL541_RS14675	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS14675	PF16527	AL541_RS14675
AL541_RS14680	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL541_RS14680	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL541_RS14685	PF00588	SpoU rRNA Methylase family
AL541_RS14690	PF04186	AL541_RS14690
AL541_RS14695	PF00206	Lyase
AL541_RS14695	PF10415	Fumarase C C-terminus
AL541_RS14700	PF03605	AL541_RS14700
AL541_RS14705	PF02683	AL541_RS14705
AL541_RS14705	PF11412	Disulphide bond corrector protein DsbC
AL541_RS14705	PF13899	Thioredoxin-like
AL541_RS14710	PF00072	Response regulator receiver domain
AL541_RS14710	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS14715	PF00999	Sodium/hydrogen exchanger family
AL541_RS14715	PF02080	TrkA-C domain
AL541_RS14715	PF03471	Transporter associated domain
AL541_RS14720	PF13937	AL541_RS14720
AL541_RS14725	PF00474	Sodium:solute symporter family
AL541_RS14740	PF00206	Lyase
AL541_RS14740	PF10415	Fumarase C C-terminus
AL541_RS14745	PF00072	Response regulator receiver domain
AL541_RS14745	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS14745	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS14745	PF12860	AL541_RS14745
AL541_RS14750	PF12832	MFS_1 like family
AL541_RS14755	PF00027	Cyclic nucleotide-binding domain
AL541_RS14755	PF03445	AL541_RS14755
AL541_RS14755	PF10335	AL541_RS14755
AL541_RS14760	PF00929	Exonuclease
AL541_RS14765	PF00501	AMP-binding enzyme
AL541_RS14765	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS14765	PF16177	AL541_RS14765
AL541_RS14770	PF01220	Dehydroquinase class II
AL541_RS14775	PF00364	Biotin-requiring enzyme
AL541_RS14780	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AL541_RS14780	PF02785	Biotin carboxylase C-terminal domain
AL541_RS14780	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL541_RS14790	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AL541_RS14795	PF01207	Dihydrouridine synthase (Dus)
AL541_RS14800	PF02954	Bacterial regulatory protein, Fis family
AL541_RS14805	PF07690	Major Facilitator Superfamily
AL541_RS14810	PF00005	ABC transporter
AL541_RS14810	PF12848	ABC transporter
AL541_RS14865	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL541_RS14865	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL541_RS14865	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL541_RS14870	PF13520	Amino acid permease
AL541_RS14880	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS14885	PF00376	MerR family regulatory protein
AL541_RS14885	PF09278	MerR, DNA binding
AL541_RS14895	PF01808	AICARFT/IMPCHase bienzyme
AL541_RS14895	PF02142	MGS-like domain
AL541_RS14900	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AL541_RS14900	PF02843	Phosphoribosylglycinamide synthetase, C domain
AL541_RS14900	PF02844	Phosphoribosylglycinamide synthetase, N domain
AL541_RS14905	PF07356	AL541_RS14905
AL541_RS14910	PF00216	Bacterial DNA-binding protein
AL541_RS14915	PF00571	CBS domain
AL541_RS14915	PF01595	AL541_RS14915
AL541_RS14920	PF04222	Protein of unknown function (DUF416)
AL541_RS14925	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL541_RS14930	PF03167	Uracil DNA glycosylase superfamily
AL541_RS14935	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AL541_RS14940	PF00293	NUDIX domain
AL541_RS14940	PF09297	NADH pyrophosphatase zinc ribbon domain
AL541_RS14945	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
AL541_RS14950	PF00623	RNA polymerase Rpb1, domain 2
AL541_RS14950	PF04983	RNA polymerase Rpb1, domain 3
AL541_RS14950	PF04997	RNA polymerase Rpb1, domain 1
AL541_RS14950	PF04998	RNA polymerase Rpb1, domain 5
AL541_RS14950	PF05000	RNA polymerase Rpb1, domain 4
AL541_RS14955	PF00562	RNA polymerase Rpb2, domain 6
AL541_RS14955	PF04560	RNA polymerase Rpb2, domain 7
AL541_RS14955	PF04561	RNA polymerase Rpb2, domain 2
AL541_RS14955	PF04563	RNA polymerase beta subunit
AL541_RS14955	PF04565	RNA polymerase Rpb2, domain 3
AL541_RS14955	PF10385	RNA polymerase beta subunit external 1 domain
AL541_RS14960	PF00542	Ribosomal protein L7/L12 C-terminal domain
AL541_RS14960	PF16320	AL541_RS14960
AL541_RS14965	PF00466	Ribosomal protein L10
AL541_RS14970	PF00687	Ribosomal protein L1p/L10e family
AL541_RS14975	PF00298	Ribosomal protein L11, RNA binding domain
AL541_RS14975	PF03946	Ribosomal protein L11, N-terminal domain
AL541_RS14980	PF00467	KOW motif
AL541_RS14980	PF02357	Transcription termination factor nusG
AL541_RS14985	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AL541_RS14995	PF00009	Elongation factor Tu GTP binding domain
AL541_RS14995	PF03143	Elongation factor Tu C-terminal domain
AL541_RS14995	PF03144	Elongation factor Tu domain 2
AL541_RS15025	PF00485	Phosphoribulokinase / Uridine kinase family
AL541_RS15030	PF02237	Biotin protein ligase C terminal domain
AL541_RS15030	PF03099	Biotin/lipoate A/B protein ligase family
AL541_RS15030	PF08279	HTH domain
AL541_RS15035	PF01565	FAD binding domain
AL541_RS15035	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AL541_RS15040	PF13508	Acetyltransferase (GNAT) domain
AL541_RS15045	PF13091	PLD-like domain
AL541_RS15105	PF00076	RNA recognition motif
AL541_RS15110	PF01177	Asp/Glu/Hydantoin racemase
AL541_RS15115	PF01902	ATP-binding region
AL541_RS15120	PF00593	TonB dependent receptor
AL541_RS15120	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS15125	PF05958	tRNA (Uracil-5-)-methyltransferase
AL541_RS15130	PF07226	AL541_RS15130
AL541_RS15135	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS15140	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL541_RS15140	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS15145	PF01554	MatE
AL541_RS15150	PF04072	Leucine carboxyl methyltransferase
AL541_RS15160	PF00717	Peptidase S24-like
AL541_RS15160	PF01726	LexA DNA binding domain
AL541_RS15170	PF01553	Acyltransferase
AL541_RS15175	PF01040	UbiA prenyltransferase family
AL541_RS15180	PF04345	Chorismate lyase
AL541_RS15185	PF03748	AL541_RS15185
AL541_RS15190	PF01694	Rhomboid family
AL541_RS15190	PF12122	Protein of unknown function (DUF3582)
AL541_RS15195	PF00581	Rhodanese-like domain
AL541_RS15205	PF00140	Sigma-70 factor, region 1
AL541_RS15205	PF04542	Sigma-70 region 2
AL541_RS15205	PF04545	Sigma-70, region 4
AL541_RS15215	PF00005	ABC transporter
AL541_RS15220	PF00448	SRP54-type protein, GTPase domain
AL541_RS15220	PF02881	SRP54-type protein, helical bundle domain
AL541_RS15225	PF03602	Conserved hypothetical protein 95
AL541_RS15230	PF06611	AL541_RS15230
AL541_RS15235	PF01914	AL541_RS15235
AL541_RS15240	PF10678	AL541_RS15240
AL541_RS15245	PF07947	AL541_RS15245
AL541_RS15255	PF13643	AL541_RS15255
AL541_RS15260	PF10694	Protein of unknown function (DUF2500)
AL541_RS15265	PF01757	AL541_RS15265
AL541_RS15270	PF07690	Major Facilitator Superfamily
AL541_RS15275	PF05706	Cyclin-dependent kinase inhibitor 3 (CDKN3)
AL541_RS15280	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL541_RS15280	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL541_RS15285	PF01022	Bacterial regulatory protein, arsR family
AL541_RS15290	PF00563	EAL domain
AL541_RS15290	PF08668	HDOD domain
AL541_RS15295	PF01810	AL541_RS15295
AL541_RS15300	PF12146	Putative lysophospholipase
AL541_RS15305	PF08282	haloacid dehalogenase-like hydrolase
AL541_RS15310	PF01878	EVE domain
AL541_RS15320	PF03942	AL541_RS15320
AL541_RS15325	PF00563	EAL domain
AL541_RS15325	PF00990	GGDEF domain
AL541_RS15325	PF08495	AL541_RS15325
AL541_RS15325	PF10442	AL541_RS15325
AL541_RS15330	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS15335	PF00589	Phage integrase family
AL541_RS15335	PF02899	Phage integrase, N-terminal SAM-like domain
AL541_RS15340	PF04340	Protein of unknown function, DUF484
AL541_RS15345	PF01678	Diaminopimelate epimerase
AL541_RS15350	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL541_RS15350	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL541_RS15360	PF01491	Frataxin-like domain
AL541_RS15365	PF01295	AL541_RS15365
AL541_RS15365	PF12633	AL541_RS15365
AL541_RS15370	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AL541_RS15370	PF03900	Porphobilinogen deaminase, C-terminal domain
AL541_RS15375	PF02602	Uroporphyrinogen-III synthase HemD
AL541_RS15380	PF04375	AL541_RS15380
AL541_RS15385	PF07219	AL541_RS15385
AL541_RS15425	PF00175	Oxidoreductase NAD-binding domain
AL541_RS15430	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL541_RS15435	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL541_RS15445	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL541_RS15445	PF07497	Rho termination factor, RNA-binding domain
AL541_RS15445	PF07498	Rho termination factor, N-terminal domain
AL541_RS15450	PF00085	Thioredoxin
AL541_RS15455	PF00270	DEAD/DEAH box helicase
AL541_RS15455	PF00271	Helicase conserved C-terminal domain
AL541_RS15460	PF02541	Ppx/GppA phosphatase family
AL541_RS15465	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL541_RS15465	PF04321	RmlD substrate binding domain
AL541_RS15470	PF02592	AL541_RS15470
AL541_RS15480	PF12305	AL541_RS15480
AL541_RS15485	PF00270	DEAD/DEAH box helicase
AL541_RS15485	PF00271	Helicase conserved C-terminal domain
AL541_RS15485	PF00570	HRDC domain
AL541_RS15485	PF09382	RQC domain
AL541_RS15485	PF16124	AL541_RS15485
AL541_RS15490	PF00892	EamA-like transporter family
AL541_RS15495	PF02311	AraC-like ligand binding domain
AL541_RS15495	PF12833	Helix-turn-helix domain
AL541_RS15500	PF01810	AL541_RS15500
AL541_RS15505	PF01019	Gamma-glutamyltranspeptidase
AL541_RS15515	PF00580	UvrD/REP helicase N-terminal domain
AL541_RS15515	PF13361	UvrD-like helicase C-terminal domain
AL541_RS15520	PF10048	AL541_RS15520
AL541_RS15525	PF05114	Protein of unknown function (DUF692)
AL541_RS15530	PF09836	Uncharacterized protein conserved in bacteria (DUF2063)
AL541_RS15535	PF07681	AL541_RS15535
AL541_RS15545	PF07690	Major Facilitator Superfamily
AL541_RS15550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS15550	PF03466	LysR substrate binding domain
AL541_RS15555	PF00557	Metallopeptidase family M24
AL541_RS15555	PF01321	Creatinase/Prolidase N-terminal domain
AL541_RS15555	PF16188	AL541_RS15555
AL541_RS15555	PF16189	AL541_RS15555
AL541_RS15560	PF04055	Radical SAM superfamily
AL541_RS15560	PF06968	Biotin and Thiamin Synthesis associated domain
AL541_RS15565	PF05690	Thiazole biosynthesis protein ThiG
AL541_RS15570	PF02597	ThiS family
AL541_RS15575	PF00899	ThiF family
AL541_RS15580	PF02581	Thiamine monophosphate synthase/TENI
AL541_RS15585	PF01964	ThiC family
AL541_RS15585	PF13667	ThiC-associated domain
AL541_RS15590	PF02537	AL541_RS15590
AL541_RS15595	PF00394	Multicopper oxidase
AL541_RS15595	PF07731	Multicopper oxidase
AL541_RS15595	PF07732	Multicopper oxidase
AL541_RS15595	PF10518	TAT (twin-arginine translocation) pathway signal sequence
AL541_RS15640	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS15645	PF07369	Protein of unknown function (DUF1488)
AL541_RS15650	PF01488	Shikimate / quinate 5-dehydrogenase
AL541_RS15650	PF08501	Shikimate dehydrogenase substrate binding domain
AL541_RS15655	PF01218	Coproporphyrinogen III oxidase
AL541_RS15660	PF01300	Telomere recombination
AL541_RS15665	PF00731	AIR carboxylase
AL541_RS15670	PF02222	ATP-grasp domain
AL541_RS15675	PF01396	AL541_RS15675
AL541_RS15685	PF04361	AL541_RS15685
AL541_RS15690	PF02481	DNA recombination-mediator protein A
AL541_RS15695	PF01476	LysM domain
AL541_RS15700	PF01327	Polypeptide deformylase
AL541_RS15705	PF00551	Formyl transferase
AL541_RS15705	PF02911	Formyl transferase, C-terminal domain
AL541_RS15710	PF01029	NusB family
AL541_RS15710	PF01189	NOL1/NOP2/sun family
AL541_RS15715	PF02080	TrkA-C domain
AL541_RS15715	PF02254	TrkA-N domain
AL541_RS15720	PF02386	Cation transport protein
AL541_RS15725	PF11355	AL541_RS15725
AL541_RS15730	PF03006	AL541_RS15730
AL541_RS15735	PF07070	AL541_RS15735
AL541_RS15745	PF06288	Protein of unknown function (DUF1040)
AL541_RS15750	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
AL541_RS15750	PF12801	AL541_RS15750
AL541_RS15750	PF13746	4Fe-4S dicluster domain
AL541_RS15755	PF01636	Phosphotransferase enzyme family
AL541_RS15760	PF01323	DSBA-like thioredoxin domain
AL541_RS15765	PF01553	Acyltransferase
AL541_RS15770	PF11059	AL541_RS15770
AL541_RS15775	PF01078	Magnesium chelatase, subunit ChlI
AL541_RS15775	PF13335	AL541_RS15775
AL541_RS15775	PF13541	Subunit ChlI of Mg-chelatase
AL541_RS15780	PF00205	Thiamine pyrophosphate enzyme, central domain
AL541_RS15780	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL541_RS15780	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL541_RS15785	PF13710	ACT domain
AL541_RS15790	PF01063	Aminotransferase class IV
AL541_RS15795	PF00920	Dehydratase family
AL541_RS15800	PF00291	Pyridoxal-phosphate dependent enzyme
AL541_RS15800	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL541_RS15805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS15805	PF03466	LysR substrate binding domain
AL541_RS15810	PF07690	Major Facilitator Superfamily
AL541_RS15815	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS15820	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS15825	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS15825	PF12804	MobA-like NTP transferase domain
AL541_RS15830	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AL541_RS15830	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AL541_RS15835	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL541_RS15835	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL541_RS15840	PF00231	ATP synthase
AL541_RS15845	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL541_RS15845	PF00306	ATP synthase alpha/beta chain, C terminal domain
AL541_RS15845	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL541_RS15850	PF00213	ATP synthase delta (OSCP) subunit
AL541_RS15855	PF00430	ATP synthase B/B' CF(0)
AL541_RS15860	PF00137	ATP synthase subunit C
AL541_RS15865	PF00119	ATP synthase A chain
AL541_RS15870	PF03899	AL541_RS15870
AL541_RS15875	PF02195	ParB-like nuclease domain
AL541_RS15880	PF13614	AAA domain
AL541_RS15885	PF02527	rRNA small subunit methyltransferase G
AL541_RS15890	PF01134	Glucose inhibited division protein A
AL541_RS15890	PF13932	GidA associated domain 3
AL541_RS15895	PF00258	Flavodoxin
AL541_RS15900	PF01926	50S ribosome-binding GTPase
AL541_RS15900	PF10396	GTP-binding protein TrmE N-terminus
AL541_RS15900	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AL541_RS15905	PF02096	60Kd inner membrane protein
AL541_RS15905	PF14849	YidC periplasmic domain
AL541_RS15910	PF01809	AL541_RS15910
AL541_RS15915	PF00825	Ribonuclease P
AL541_RS15920	PF00468	Ribosomal protein L34
AL541_RS15925	PF00005	ABC transporter
AL541_RS15930	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS15935	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS15945	PF00308	Bacterial dnaA  protein
AL541_RS15945	PF08299	Bacterial dnaA protein helix-turn-helix
AL541_RS15945	PF11638	DnaA N-terminal domain
AL541_RS15950	PF00712	DNA polymerase III beta subunit, N-terminal domain
AL541_RS15950	PF02767	DNA polymerase III beta subunit, central domain
AL541_RS15950	PF02768	DNA polymerase III beta subunit, C-terminal domain
AL541_RS15955	PF02463	RecF/RecN/SMC N terminal domain
AL541_RS15960	PF00204	DNA gyrase B
AL541_RS15960	PF00986	DNA gyrase B subunit, carboxyl terminus
AL541_RS15960	PF01751	Toprim domain
AL541_RS15960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS15970	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL541_RS15980	PF00011	Hsp20/alpha crystallin family
AL541_RS15985	PF00155	Aminotransferase class I and II
AL541_RS15990	PF00128	Alpha amylase, catalytic domain
AL541_RS15995	PF02092	AL541_RS15995
AL541_RS15995	PF05746	DALR anticodon binding domain
AL541_RS16000	PF02091	Glycyl-tRNA synthetase alpha subunit
AL541_RS16005	PF01169	AL541_RS16005
AL541_RS16015	PF01206	Sulfurtransferase TusA
AL541_RS16025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS16025	PF03466	LysR substrate binding domain
AL541_RS16030	PF00107	Zinc-binding dehydrogenase
AL541_RS16030	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS16035	PF00108	Thiolase, N-terminal domain
AL541_RS16035	PF02803	Thiolase, C-terminal domain
AL541_RS16040	PF00378	Enoyl-CoA hydratase/isomerase family
AL541_RS16040	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL541_RS16040	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL541_RS16045	PF01205	Uncharacterized protein family UPF0029
AL541_RS16045	PF09186	Domain of unknown function (DUF1949)
AL541_RS16050	PF02386	Cation transport protein
AL541_RS16055	PF12724	Flavodoxin domain
AL541_RS16095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS16095	PF03466	LysR substrate binding domain
AL541_RS16100	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AL541_RS16100	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AL541_RS16105	PF04380	AL541_RS16105
AL541_RS16110	PF00873	AcrB/AcrD/AcrF family
AL541_RS16115	PF16576	AL541_RS16115
AL541_RS16120	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS16125	PF00580	UvrD/REP helicase N-terminal domain
AL541_RS16125	PF13361	UvrD-like helicase C-terminal domain
AL541_RS16130	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL541_RS16160	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS16170	PF00005	ABC transporter
AL541_RS16170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS16175	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS16180	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS16185	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS16185	PF12911	AL541_RS16185
AL541_RS16195	PF05036	Sporulation related domain
AL541_RS16210	PF07638	ECF sigma factor
AL541_RS16220	PF00069	Protein kinase domain
AL541_RS16225	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS16225	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL541_RS16230	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS16230	PF03466	LysR substrate binding domain
AL541_RS16235	PF00893	Small Multidrug Resistance protein
AL541_RS16240	PF00893	Small Multidrug Resistance protein
AL541_RS16245	PF00920	Dehydratase family
AL541_RS16250	PF01202	Shikimate kinase
AL541_RS16255	PF02447	AL541_RS16255
AL541_RS16260	PF01081	KDPG and KHG aldolase
AL541_RS16265	PF01048	Phosphorylase superfamily
AL541_RS16270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS16270	PF03466	LysR substrate binding domain
AL541_RS16275	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL541_RS16275	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS16280	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
AL541_RS16285	PF01432	Peptidase family M3
AL541_RS16290	PF01037	AsnC family
AL541_RS16290	PF13404	AsnC-type helix-turn-helix domain
AL541_RS16295	PF00563	EAL domain
AL541_RS16295	PF00990	GGDEF domain
AL541_RS16295	PF13426	PAS domain
AL541_RS16300	PF04445	Putative SAM-dependent methyltransferase
AL541_RS16310	PF00892	EamA-like transporter family
AL541_RS16315	PF00582	Universal stress protein family
AL541_RS16320	PF00210	Ferritin-like domain
AL541_RS16325	PF10625	AL541_RS16325
AL541_RS16330	PF03486	HI0933-like protein
AL541_RS16335	PF00158	Sigma-54 interaction domain
AL541_RS16335	PF02954	Bacterial regulatory protein, Fis family
AL541_RS16340	PF04972	BON domain
AL541_RS16345	PF07043	AL541_RS16345
AL541_RS16355	PF01814	Hemerythrin HHE cation binding domain
AL541_RS16360	PF00781	Diacylglycerol kinase catalytic domain
AL541_RS16360	PF00782	Dual specificity phosphatase, catalytic domain
AL541_RS16370	PF09537	Domain of unknown function (DUF2383)
AL541_RS16390	PF01594	AL541_RS16390
AL541_RS16395	PF00563	EAL domain
AL541_RS16395	PF00990	GGDEF domain
AL541_RS16395	PF08448	PAS fold
AL541_RS16395	PF13426	PAS domain
AL541_RS16400	PF00892	EamA-like transporter family
AL541_RS16405	PF02646	AL541_RS16405
AL541_RS16410	PF01209	ubiE/COQ5 methyltransferase family
AL541_RS16415	PF02036	SCP-2 sterol transfer family
AL541_RS16420	PF03109	AL541_RS16420
AL541_RS16425	PF02416	mttA/Hcf106 family
AL541_RS16430	PF02416	mttA/Hcf106 family
AL541_RS16435	PF00902	Sec-independent protein translocase protein (TatC)
AL541_RS16445	PF01026	TatD related DNase
AL541_RS16455	PF00490	Delta-aminolevulinic acid dehydratase
AL541_RS16460	PF00583	Acetyltransferase (GNAT) family
AL541_RS16470	PF00476	DNA polymerase family A
AL541_RS16470	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL541_RS16470	PF01612	3'-5' exonuclease
AL541_RS16470	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL541_RS16475	PF01926	50S ribosome-binding GTPase
AL541_RS16480	PF00034	Cytochrome c
AL541_RS16490	PF13489	Methyltransferase domain
AL541_RS16495	PF04220	AL541_RS16495
AL541_RS16500	PF10675	AL541_RS16500
AL541_RS16505	PF04055	Radical SAM superfamily
AL541_RS16505	PF06969	HemN C-terminal domain
AL541_RS16510	PF00962	Adenosine/AMP deaminase
AL541_RS16515	PF00563	EAL domain
AL541_RS16515	PF00990	GGDEF domain
AL541_RS16515	PF02743	Cache domain
AL541_RS16520	PF00072	Response regulator receiver domain
AL541_RS16520	PF00158	Sigma-54 interaction domain
AL541_RS16520	PF02954	Bacterial regulatory protein, Fis family
AL541_RS16525	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS16525	PF00989	PAS fold
AL541_RS16525	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS16530	PF13511	AL541_RS16530
AL541_RS16535	PF00120	Glutamine synthetase, catalytic domain
AL541_RS16535	PF03951	Glutamine synthetase, beta-Grasp domain
AL541_RS16540	PF00009	Elongation factor Tu GTP binding domain
AL541_RS16540	PF00679	Elongation factor G C-terminus
AL541_RS16540	PF03144	Elongation factor Tu domain 2
AL541_RS16545	PF13521	AAA domain
AL541_RS16550	PF11172	AL541_RS16550
AL541_RS16555	PF03631	AL541_RS16555
AL541_RS16560	PF02580	D-Tyr-tRNA(Tyr) deacylase
AL541_RS16565	PF09500	Putative thioesterase (yiiD_Cterm)
AL541_RS16565	PF13673	Acetyltransferase (GNAT) domain
AL541_RS16570	PF05170	AL541_RS16570
AL541_RS16575	PF01293	Phosphoenolpyruvate carboxykinase
AL541_RS16580	PF01430	Hsp33 protein
AL541_RS16585	PF01479	S4 domain
AL541_RS16590	PF11356	Type IV pilus biogenesis
AL541_RS16595	PF00263	AL541_RS16595
AL541_RS16595	PF03958	Bacterial type II/III secretion system short domain
AL541_RS16600	PF00437	Type II/IV secretion system protein
AL541_RS16605	PF00482	Type II secretion system (T2SS), protein F
AL541_RS16610	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS16610	PF08334	Type II secretion system (T2SS), protein G
AL541_RS16615	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS16615	PF12019	Type II transport protein GspH
AL541_RS16620	PF02501	Type II secretion system (T2SS), protein I
AL541_RS16625	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS16625	PF11612	Type II secretion system (T2SS), protein J
AL541_RS16630	PF03934	Type II secretion system (T2SS), protein K
AL541_RS16635	PF05134	Type II secretion system (T2SS), protein L
AL541_RS16635	PF12693	GspL periplasmic domain
AL541_RS16640	PF04612	Type II secretion system (T2SS), protein M
AL541_RS16645	PF01203	AL541_RS16645
AL541_RS16650	PF00459	Inositol monophosphatase family
AL541_RS16655	PF00293	NUDIX domain
AL541_RS16660	PF01106	NifU-like domain
AL541_RS16660	PF01521	Iron-sulphur cluster biosynthesis
AL541_RS16665	PF00156	Phosphoribosyl transferase domain
AL541_RS16670	PF00561	alpha/beta hydrolase fold
AL541_RS16680	PF00575	S1 RNA binding domain
AL541_RS16680	PF09371	Tex-like protein N-terminal domain
AL541_RS16680	PF12836	Helix-hairpin-helix motif
AL541_RS16680	PF16921	AL541_RS16680
AL541_RS16685	PF05618	Putative ATP-dependant zinc protease
AL541_RS16690	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL541_RS16690	PF03449	Transcription elongation factor, N-terminal
AL541_RS16695	PF06476	AL541_RS16695
AL541_RS16700	PF00072	Response regulator receiver domain
AL541_RS16700	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS16705	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS16705	PF00672	HAMP domain
AL541_RS16705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS16710	PF00860	Permease family
AL541_RS16715	PF00270	DEAD/DEAH box helicase
AL541_RS16715	PF00271	Helicase conserved C-terminal domain
AL541_RS16715	PF17191	AL541_RS16715
AL541_RS16720	PF00588	SpoU rRNA Methylase family
AL541_RS16720	PF12105	SpoU, rRNA methylase, C-terminal
AL541_RS16725	PF02824	TGS domain
AL541_RS16725	PF04607	Region found in RelA / SpoT proteins
AL541_RS16725	PF13291	ACT domain
AL541_RS16725	PF13328	HD domain
AL541_RS16730	PF01192	RNA polymerase Rpb6
AL541_RS16735	PF00625	Guanylate kinase
AL541_RS16745	PF13181	Tetratricopeptide repeat
AL541_RS16750	PF03544	Gram-negative bacterial TonB protein C-terminal
AL541_RS16755	PF02472	Biopolymer transport protein ExbD/TolR
AL541_RS16760	PF01618	AL541_RS16760
AL541_RS16765	PF01618	AL541_RS16765
AL541_RS16770	PF11932	AL541_RS16770
AL541_RS16775	PF00593	TonB dependent receptor
AL541_RS16775	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS16785	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS16790	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS16795	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS16800	PF00005	ABC transporter
AL541_RS16800	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS16805	PF00005	ABC transporter
AL541_RS16810	PF06146	AL541_RS16810
AL541_RS16815	PF03755	AL541_RS16815
AL541_RS16815	PF08340	AL541_RS16815
AL541_RS16825	PF01138	3' exoribonuclease family, domain 1
AL541_RS16825	PF03725	3' exoribonuclease family, domain 2
AL541_RS16830	PF00156	Phosphoribosyl transferase domain
AL541_RS16835	PF03279	AL541_RS16835
AL541_RS16840	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS16845	PF02441	Flavoprotein
AL541_RS16845	PF04127	DNA / pantothenate metabolism flavoprotein
AL541_RS16855	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS16855	PF00672	HAMP domain
AL541_RS16855	PF17200	AL541_RS16855
AL541_RS16860	PF04002	RadC-like JAB domain
AL541_RS16865	PF00830	Ribosomal L28 family
AL541_RS16870	PF00471	Ribosomal protein L33
AL541_RS16880	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL541_RS16880	PF06827	Zinc finger found in FPG and IleRS
AL541_RS16880	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL541_RS16885	PF01467	Cytidylyltransferase
AL541_RS16890	PF05686	AL541_RS16890
AL541_RS16895	PF00535	Glycosyl transferase family 2
AL541_RS16895	PF02709	N-terminal domain of galactosyltransferase
AL541_RS16900	PF00535	Glycosyl transferase family 2
AL541_RS16905	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL541_RS16910	PF01219	Prokaryotic diacylglycerol kinase
AL541_RS16915	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
AL541_RS16920	PF16363	AL541_RS16920
AL541_RS16925	PF00483	Nucleotidyl transferase
AL541_RS16930	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL541_RS16935	PF00501	AMP-binding enzyme
AL541_RS16935	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS16940	PF00550	Phosphopantetheine attachment site
AL541_RS16945	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL541_RS16945	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL541_RS16950	PF00550	Phosphopantetheine attachment site
AL541_RS16955	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS16960	PF00551	Formyl transferase
AL541_RS16965	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS16970	PF00535	Glycosyl transferase family 2
AL541_RS16975	PF00534	Glycosyl transferases group 1
AL541_RS16975	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AL541_RS16980	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL541_RS16985	PF01755	AL541_RS16985
AL541_RS16990	PF03279	AL541_RS16990
AL541_RS16995	PF01370	NAD dependent epimerase/dehydratase family
AL541_RS17000	PF06082	AL541_RS17000
AL541_RS17005	PF06251	Capsule biosynthesis GfcC
AL541_RS17010	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
AL541_RS17020	PF13505	Outer membrane protein beta-barrel domain
AL541_RS17025	PF02563	Polysaccharide biosynthesis/export protein
AL541_RS17025	PF06251	Capsule biosynthesis GfcC
AL541_RS17025	PF10531	SLBB domain
AL541_RS17030	PF02706	Chain length determinant protein
AL541_RS17040	PF00534	Glycosyl transferases group 1
AL541_RS17045	PF00534	Glycosyl transferases group 1
AL541_RS17060	PF00535	Glycosyl transferase family 2
AL541_RS17065	PF00535	Glycosyl transferase family 2
AL541_RS17070	PF16363	AL541_RS17070
AL541_RS17075	PF01370	NAD dependent epimerase/dehydratase family
AL541_RS17080	PF00293	NUDIX domain
AL541_RS17085	PF00483	Nucleotidyl transferase
AL541_RS17085	PF01050	Mannose-6-phosphate isomerase
AL541_RS17090	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL541_RS17090	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL541_RS17090	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL541_RS17090	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL541_RS17095	PF01238	Phosphomannose isomerase type I
AL541_RS17100	PF00535	Glycosyl transferase family 2
AL541_RS17105	PF01370	NAD dependent epimerase/dehydratase family
AL541_RS17110	PF02397	AL541_RS17110
AL541_RS17115	PF02719	Polysaccharide biosynthesis protein
AL541_RS17115	PF13727	CoA-binding domain
AL541_RS17120	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL541_RS17120	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL541_RS17120	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL541_RS17125	PF00483	Nucleotidyl transferase
AL541_RS17130	PF00753	Metallo-beta-lactamase superfamily
AL541_RS17130	PF07521	RNA-metabolising metallo-beta-lactamase
AL541_RS17130	PF10996	Beta-Casp domain
AL541_RS17135	PF00121	Triosephosphate isomerase
AL541_RS17140	PF13302	Acetyltransferase (GNAT) domain
AL541_RS17150	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL541_RS17155	PF00873	AcrB/AcrD/AcrF family
AL541_RS17160	PF13437	HlyD family secretion protein
AL541_RS17160	PF13533	Biotin-lipoyl like
AL541_RS17170	PF00326	Prolyl oligopeptidase family
AL541_RS17170	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL541_RS17175	PF00005	ABC transporter
AL541_RS17180	PF00582	Universal stress protein family
AL541_RS17185	PF02525	Flavodoxin-like fold
AL541_RS17190	PF00999	Sodium/hydrogen exchanger family
AL541_RS17190	PF02254	TrkA-N domain
AL541_RS17200	PF12840	Helix-turn-helix domain
AL541_RS17205	PF00128	Alpha amylase, catalytic domain
AL541_RS17210	PF13411	MerR HTH family regulatory protein
AL541_RS17215	PF02627	Carboxymuconolactone decarboxylase family
AL541_RS17220	PF09016	Pas factor saposin fold
AL541_RS17225	PF01752	Collagenase
AL541_RS17225	PF04151	Bacterial pre-peptidase C-terminal domain
AL541_RS17225	PF08453	Peptidase family M9 N-terminal
AL541_RS17235	PF01039	Carboxyl transferase domain
AL541_RS17240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS17240	PF03466	LysR substrate binding domain
AL541_RS17245	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS17245	PF00672	HAMP domain
AL541_RS17245	PF17203	AL541_RS17245
AL541_RS17255	PF03824	AL541_RS17255
AL541_RS17260	PF02583	Metal-sensitive transcriptional repressor
AL541_RS17265	PF02447	AL541_RS17265
AL541_RS17270	PF01370	NAD dependent epimerase/dehydratase family
AL541_RS17275	PF01261	Xylose isomerase-like TIM barrel
AL541_RS17280	PF00596	Class II Aldolase and Adducin N-terminal domain
AL541_RS17285	PF07005	Protein of unknown function, DUF1537
AL541_RS17285	PF17042	AL541_RS17285
AL541_RS17290	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL541_RS17290	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL541_RS17295	PF00455	AL541_RS17295
AL541_RS17295	PF08220	DeoR-like helix-turn-helix domain
AL541_RS17300	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS17305	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS17310	PF00005	ABC transporter
AL541_RS17315	PF00005	ABC transporter
AL541_RS17320	PF01554	MatE
AL541_RS17325	PF13616	PPIC-type PPIASE domain
AL541_RS17330	PF00072	Response regulator receiver domain
AL541_RS17330	PF01584	CheW-like domain
AL541_RS17335	PF01923	Cobalamin adenosyltransferase
AL541_RS17340	PF01243	Pyridoxamine 5'-phosphate oxidase
AL541_RS17345	PF06228	Haem utilisation ChuX/HutX
AL541_RS17350	PF04055	Radical SAM superfamily
AL541_RS17355	PF03544	Gram-negative bacterial TonB protein C-terminal
AL541_RS17360	PF01618	AL541_RS17360
AL541_RS17365	PF02472	Biopolymer transport protein ExbD/TolR
AL541_RS17370	PF01497	Periplasmic binding protein
AL541_RS17375	PF01032	FecCD transport family
AL541_RS17380	PF00005	ABC transporter
AL541_RS17390	PF04175	Protein of unknown function (DUF406)
AL541_RS17395	PF07383	AL541_RS17395
AL541_RS17405	PF01553	Acyltransferase
AL541_RS17420	PF01467	Cytidylyltransferase
AL541_RS17425	PF02540	NAD synthase
AL541_RS17430	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL541_RS17430	PF00175	Oxidoreductase NAD-binding domain
AL541_RS17430	PF00970	Oxidoreductase FAD-binding domain
AL541_RS17430	PF03473	MOSC domain
AL541_RS17430	PF03476	MOSC N-terminal beta barrel domain
AL541_RS17435	PF01679	AL541_RS17435
AL541_RS17445	PF01979	Amidohydrolase family
AL541_RS17450	PF05661	AL541_RS17450
AL541_RS17455	PF00246	Zinc carboxypeptidase
AL541_RS17460	PF01032	FecCD transport family
AL541_RS17465	PF01032	FecCD transport family
AL541_RS17470	PF01497	Periplasmic binding protein
AL541_RS17475	PF00593	TonB dependent receptor
AL541_RS17475	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS17480	PF00005	ABC transporter
AL541_RS17480	PF00664	ABC transporter transmembrane region
AL541_RS17485	PF00005	ABC transporter
AL541_RS17490	PF12833	Helix-turn-helix domain
AL541_RS17495	PF00892	EamA-like transporter family
AL541_RS17500	PF03061	Thioesterase superfamily
AL541_RS17510	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS17515	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS17515	PF14785	Maltose transport system permease protein MalF P2 domain
AL541_RS17520	PF13416	Bacterial extracellular solute-binding protein
AL541_RS17525	PF00005	ABC transporter
AL541_RS17525	PF08402	TOBE domain
AL541_RS17530	PF02397	AL541_RS17530
AL541_RS17530	PF13727	CoA-binding domain
AL541_RS17535	PF10082	AL541_RS17535
AL541_RS17540	PF02563	Polysaccharide biosynthesis/export protein
AL541_RS17540	PF10531	SLBB domain
AL541_RS17545	PF02706	Chain length determinant protein
AL541_RS17545	PF13614	AAA domain
AL541_RS17545	PF13807	AL541_RS17545
AL541_RS17550	PF10364	AL541_RS17550
AL541_RS17555	PF00534	Glycosyl transferases group 1
AL541_RS17555	PF13439	Glycosyltransferase Family 4
AL541_RS17560	PF04932	AL541_RS17560
AL541_RS17565	PF10364	AL541_RS17565
AL541_RS17570	PF13579	Glycosyl transferase 4-like domain
AL541_RS17570	PF13692	Glycosyl transferases group 1
AL541_RS17575	PF01943	AL541_RS17575
AL541_RS17575	PF14667	Polysaccharide biosynthesis C-terminal domain
AL541_RS17580	PF04892	AL541_RS17580
AL541_RS17585	PF04266	ASCH domain
AL541_RS17590	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS17590	PF16925	AL541_RS17590
AL541_RS17595	PF00107	Zinc-binding dehydrogenase
AL541_RS17595	PF16884	AL541_RS17595
AL541_RS17600	PF00043	Glutathione S-transferase, C-terminal domain
AL541_RS17600	PF02798	Glutathione S-transferase, N-terminal domain
AL541_RS17605	PF00199	Catalase
AL541_RS17605	PF06628	Catalase-related immune-responsive
AL541_RS17610	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL541_RS17610	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL541_RS17615	PF09313	Domain of unknown function (DUF1971)
AL541_RS17620	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS17625	PF00258	Flavodoxin
AL541_RS17625	PF00301	Rubredoxin
AL541_RS17625	PF00753	Metallo-beta-lactamase superfamily
AL541_RS17630	PF00158	Sigma-54 interaction domain
AL541_RS17630	PF01590	GAF domain
AL541_RS17640	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS17645	PF00127	Copper binding proteins, plastocyanin/azurin family
AL541_RS17650	PF06249	Ethanolamine utilisation protein EutQ
AL541_RS17655	PF01266	FAD dependent oxidoreductase
AL541_RS17660	PF00301	Rubredoxin
AL541_RS17660	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS17665	PF00171	Aldehyde dehydrogenase family
AL541_RS17670	PF00355	Rieske [2Fe-2S] domain
AL541_RS17670	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AL541_RS17675	PF02028	BCCT family transporter
AL541_RS17680	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS17680	PF03466	LysR substrate binding domain
AL541_RS17685	PF02386	Cation transport protein
AL541_RS17690	PF02254	TrkA-N domain
AL541_RS17695	PF00072	Response regulator receiver domain
AL541_RS17695	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS17700	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS17700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS17700	PF13493	Domain of unknown function (DUF4118)
AL541_RS17705	PF00005	ABC transporter
AL541_RS17705	PF00664	ABC transporter transmembrane region
AL541_RS17710	PF00593	TonB dependent receptor
AL541_RS17710	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS17715	PF00005	ABC transporter
AL541_RS17720	PF01497	Periplasmic binding protein
AL541_RS17725	PF01032	FecCD transport family
AL541_RS17730	PF00924	Mechanosensitive ion channel
AL541_RS17735	PF13437	HlyD family secretion protein
AL541_RS17735	PF13533	Biotin-lipoyl like
AL541_RS17740	PF00005	ABC transporter
AL541_RS17745	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL541_RS17750	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS17755	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS17765	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS17765	PF00672	HAMP domain
AL541_RS17770	PF07726	ATPase family associated with various cellular activities (AAA)
AL541_RS17775	PF01882	AL541_RS17775
AL541_RS17780	PF14316	AL541_RS17780
AL541_RS17785	PF00092	von Willebrand factor type A domain
AL541_RS17790	PF13519	von Willebrand factor type A domain
AL541_RS17795	PF13584	AL541_RS17795
AL541_RS17800	PF00990	GGDEF domain
AL541_RS17805	PF00005	ABC transporter
AL541_RS17810	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS17815	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS17820	PF12849	PBP superfamily domain
AL541_RS17825	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS17825	PF00672	HAMP domain
AL541_RS17830	PF07603	AL541_RS17830
AL541_RS17835	PF07603	AL541_RS17835
AL541_RS17840	PF01483	Proprotein convertase P-domain
AL541_RS17845	PF00593	TonB dependent receptor
AL541_RS17845	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS17850	PF00326	Prolyl oligopeptidase family
AL541_RS17850	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL541_RS17855	PF00270	DEAD/DEAH box helicase
AL541_RS17855	PF00271	Helicase conserved C-terminal domain
AL541_RS17860	PF04728	Lipoprotein leucine-zipper
AL541_RS17865	PF01476	LysM domain
AL541_RS17865	PF03734	L,D-transpeptidase catalytic domain
AL541_RS17870	PF00875	DNA photolyase
AL541_RS17870	PF03441	FAD binding domain of DNA photolyase
AL541_RS17875	PF13411	MerR HTH family regulatory protein
AL541_RS17880	PF04463	AL541_RS17880
AL541_RS17880	PF08349	AL541_RS17880
AL541_RS17885	PF01048	Phosphorylase superfamily
AL541_RS17900	PF00990	GGDEF domain
AL541_RS17905	PF11742	AL541_RS17905
AL541_RS17910	PF13533	Biotin-lipoyl like
AL541_RS17915	PF07155	ECF-type riboflavin transporter, S component
AL541_RS17920	PF00005	ABC transporter
AL541_RS17920	PF12558	AL541_RS17920
AL541_RS17925	PF02361	Cobalt transport protein
AL541_RS17930	PF14145	AL541_RS17930
AL541_RS17935	PF07690	Major Facilitator Superfamily
AL541_RS17940	PF12801	AL541_RS17940
AL541_RS17940	PF13187	4Fe-4S dicluster domain
AL541_RS17945	PF12800	4Fe-4S binding domain
AL541_RS17945	PF12838	4Fe-4S dicluster domain
AL541_RS17950	PF00583	Acetyltransferase (GNAT) family
AL541_RS17955	PF02958	Ecdysteroid kinase
AL541_RS17960	PF14542	GCN5-related N-acetyl-transferase
AL541_RS17965	PF07238	PilZ domain
AL541_RS17965	PF12945	Flagellar protein YcgR
AL541_RS17970	PF13609	Gram-negative porin
AL541_RS17975	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS17975	PF00672	HAMP domain
AL541_RS17980	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL541_RS17980	PF13654	AAA domain
AL541_RS17990	PF00005	ABC transporter
AL541_RS17990	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS17995	PF00326	Prolyl oligopeptidase family
AL541_RS17995	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL541_RS18000	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS18000	PF03466	LysR substrate binding domain
AL541_RS18005	PF02652	AL541_RS18005
AL541_RS18010	PF01070	FMN-dependent dehydrogenase
AL541_RS18020	PF00924	Mechanosensitive ion channel
AL541_RS18025	PF00194	Eukaryotic-type carbonic anhydrase
AL541_RS18030	PF05229	AL541_RS18030
AL541_RS18035	PF00577	Outer membrane usher protein
AL541_RS18040	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AL541_RS18045	PF05229	AL541_RS18045
AL541_RS18050	PF05229	AL541_RS18050
AL541_RS18055	PF00107	Zinc-binding dehydrogenase
AL541_RS18055	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS18060	PF00155	Aminotransferase class I and II
AL541_RS18065	PF00563	EAL domain
AL541_RS18065	PF00990	GGDEF domain
AL541_RS18070	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS18075	PF00266	Aminotransferase class-V
AL541_RS18080	PF00080	Copper/zinc superoxide dismutase (SODC)
AL541_RS18085	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS18090	PF00072	Response regulator receiver domain
AL541_RS18090	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS18095	PF06468	Spondin_N
AL541_RS18100	PF06468	Spondin_N
AL541_RS18110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS18110	PF03466	LysR substrate binding domain
AL541_RS18115	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS18120	PF03929	AL541_RS18120
AL541_RS18130	PF07361	Cytochrome b562
AL541_RS18140	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
AL541_RS18145	PF00892	EamA-like transporter family
AL541_RS18150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS18150	PF03466	LysR substrate binding domain
AL541_RS18155	PF00089	Trypsin
AL541_RS18160	PF02050	Flagellar FliJ protein
AL541_RS18165	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL541_RS18170	PF02108	AL541_RS18170
AL541_RS18175	PF01706	FliG C-terminal domain
AL541_RS18175	PF14841	FliG middle domain
AL541_RS18175	PF14842	FliG N-terminal domain
AL541_RS18180	PF01514	Secretory protein of YscJ/FliF family
AL541_RS18180	PF08345	AL541_RS18180
AL541_RS18185	PF02049	AL541_RS18185
AL541_RS18190	PF00158	Sigma-54 interaction domain
AL541_RS18190	PF02954	Bacterial regulatory protein, Fis family
AL541_RS18195	PF00691	OmpA family
AL541_RS18200	PF01052	Surface presentation of antigens (SPOA)
AL541_RS18205	PF01052	Surface presentation of antigens (SPOA)
AL541_RS18210	PF00813	AL541_RS18210
AL541_RS18215	PF01313	AL541_RS18215
AL541_RS18220	PF01311	AL541_RS18220
AL541_RS18225	PF01312	FlhB HrpN YscU SpaS Family
AL541_RS18230	PF00771	FHIPEP family
AL541_RS18235	PF00563	EAL domain
AL541_RS18240	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS18240	PF00700	Bacterial flagellin C-terminal helical region
AL541_RS18250	PF02465	AL541_RS18250
AL541_RS18250	PF07195	AL541_RS18250
AL541_RS18250	PF07196	Flagellin hook IN motif
AL541_RS18255	PF02561	Flagellar protein FliS
AL541_RS18265	PF02120	Flagellar hook-length control protein FliK
AL541_RS18270	PF03748	AL541_RS18270
AL541_RS18275	PF04542	Sigma-70 region 2
AL541_RS18275	PF04545	Sigma-70, region 4
AL541_RS18280	PF01618	AL541_RS18280
AL541_RS18285	PF00691	OmpA family
AL541_RS18285	PF13677	AL541_RS18285
AL541_RS18300	PF08000	Bacterial PH domain
AL541_RS18305	PF09493	AL541_RS18305
AL541_RS18310	PF04982	AL541_RS18310
AL541_RS18315	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS18320	PF01228	Glycine radical
AL541_RS18320	PF02901	Pyruvate formate lyase
AL541_RS18325	PF04055	Radical SAM superfamily
AL541_RS18325	PF13353	4Fe-4S single cluster domain
AL541_RS18330	PF00923	Transaldolase
AL541_RS18340	PF10990	AL541_RS18340
AL541_RS18345	PF06123	AL541_RS18345
AL541_RS18350	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS18350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS18355	PF00072	Response regulator receiver domain
AL541_RS18355	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS18360	PF10973	AL541_RS18360
AL541_RS18370	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
AL541_RS18375	PF00583	Acetyltransferase (GNAT) family
AL541_RS18380	PF07690	Major Facilitator Superfamily
AL541_RS18385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS18385	PF03466	LysR substrate binding domain
AL541_RS18390	PF00892	EamA-like transporter family
AL541_RS18400	PF04632	AL541_RS18400
AL541_RS18405	PF02321	Outer membrane efflux protein
AL541_RS18410	PF07869	AL541_RS18410
AL541_RS18415	PF16576	AL541_RS18415
AL541_RS18420	PF07885	Ion channel
AL541_RS18425	PF01594	AL541_RS18425
AL541_RS18430	PF09829	AL541_RS18430
AL541_RS18435	PF06271	AL541_RS18435
AL541_RS18440	PF00175	Oxidoreductase NAD-binding domain
AL541_RS18440	PF00970	Oxidoreductase FAD-binding domain
AL541_RS18445	PF13279	Thioesterase-like superfamily
AL541_RS18450	PF09905	Uncharacterized conserved protein (DUF2132)
AL541_RS18455	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS18455	PF03466	LysR substrate binding domain
AL541_RS18460	PF03992	Antibiotic biosynthesis monooxygenase
AL541_RS18465	PF00881	Nitroreductase family
AL541_RS18470	PF12833	Helix-turn-helix domain
AL541_RS18475	PF00128	Alpha amylase, catalytic domain
AL541_RS18475	PF09985	Domain of unknown function (DUF2223)
AL541_RS18480	PF00768	D-alanyl-D-alanine carboxypeptidase
AL541_RS18480	PF07943	Penicillin-binding protein 5, C-terminal domain
AL541_RS18485	PF00561	alpha/beta hydrolase fold
AL541_RS18490	PF00581	Rhodanese-like domain
AL541_RS18500	PF00875	DNA photolyase
AL541_RS18500	PF03441	FAD binding domain of DNA photolyase
AL541_RS18505	PF02469	Fasciclin domain
AL541_RS18510	PF03067	Chitin binding domain
AL541_RS18515	PF01734	Patatin-like phospholipase
AL541_RS18520	PF01914	AL541_RS18520
AL541_RS18525	PF00881	Nitroreductase family
AL541_RS18530	PF02563	Polysaccharide biosynthesis/export protein
AL541_RS18530	PF10531	SLBB domain
AL541_RS18535	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL541_RS18540	PF02706	Chain length determinant protein
AL541_RS18540	PF13614	AAA domain
AL541_RS18540	PF13807	AL541_RS18540
AL541_RS18550	PF08803	Putative mono-oxygenase ydhR
AL541_RS18555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS18555	PF03466	LysR substrate binding domain
AL541_RS18560	PF08874	AL541_RS18560
AL541_RS18565	PF00375	Sodium:dicarboxylate symporter family
AL541_RS18580	PF06803	AL541_RS18580
AL541_RS18585	PF01546	Peptidase family M20/M25/M40
AL541_RS18585	PF07687	Peptidase dimerisation domain
AL541_RS18590	PF07670	Nucleoside recognition
AL541_RS18595	PF07670	Nucleoside recognition
AL541_RS18605	PF13462	Thioredoxin
AL541_RS18610	PF00128	Alpha amylase, catalytic domain
AL541_RS18615	PF00912	Transglycosylase
AL541_RS18620	PF00128	Alpha amylase, catalytic domain
AL541_RS18620	PF02806	Alpha amylase, C-terminal all-beta domain
AL541_RS18620	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL541_RS18625	PF02446	4-alpha-glucanotransferase
AL541_RS18630	PF00343	Carbohydrate phosphorylase
AL541_RS18635	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS18640	PF04018	AL541_RS18640
AL541_RS18650	PF02630	SCO1/SenC
AL541_RS18655	PF00367	phosphotransferase system, EIIB
AL541_RS18660	PF03193	Protein of unknown function, DUF258
AL541_RS18665	PF00375	Sodium:dicarboxylate symporter family
AL541_RS18670	PF08543	Phosphomethylpyrimidine kinase
AL541_RS18675	PF04014	Antidote-toxin recognition MazE
AL541_RS18680	PF08238	Sel1 repeat
AL541_RS18685	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL541_RS18685	PF03714	Bacterial pullanase-associated domain
AL541_RS18685	PF11852	Domain of unknown function (DUF3372)
AL541_RS18690	PF02018	Carbohydrate binding domain
AL541_RS18690	PF04231	Endonuclease I
AL541_RS18695	PF00128	Alpha amylase, catalytic domain
AL541_RS18705	PF07148	AL541_RS18705
AL541_RS18710	PF02264	LamB porin
AL541_RS18715	PF00128	Alpha amylase, catalytic domain
AL541_RS18715	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL541_RS18720	PF03313	AL541_RS18720
AL541_RS18720	PF03315	Serine dehydratase beta chain
AL541_RS18725	PF00474	Sodium:solute symporter family
AL541_RS18730	PF07690	Major Facilitator Superfamily
AL541_RS18735	PF12680	SnoaL-like domain
AL541_RS18745	PF12146	Putative lysophospholipase
AL541_RS18755	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS18760	PF00815	Histidinol dehydrogenase
AL541_RS18765	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL541_RS18770	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS18770	PF13377	Periplasmic binding protein-like domain
AL541_RS18775	PF03480	Bacterial extracellular solute-binding protein, family 7
AL541_RS18780	PF04290	AL541_RS18780
AL541_RS18785	PF06808	AL541_RS18785
AL541_RS18790	PF07366	SnoaL-like polyketide cyclase
AL541_RS18795	PF07366	SnoaL-like polyketide cyclase
AL541_RS18800	PF00474	Sodium:solute symporter family
AL541_RS18805	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS18805	PF13377	Periplasmic binding protein-like domain
AL541_RS18810	PF00239	Resolvase, N terminal domain
AL541_RS18810	PF02796	Helix-turn-helix domain of resolvase
AL541_RS18815	PF07690	Major Facilitator Superfamily
AL541_RS18820	PF01852	START domain
AL541_RS18830	PF01551	Peptidase family M23
AL541_RS18835	PF04519	AL541_RS18835
AL541_RS18840	PF00675	Insulinase (Peptidase family M16)
AL541_RS18840	PF05193	Peptidase M16 inactive domain
AL541_RS18845	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS18845	PF00672	HAMP domain
AL541_RS18845	PF02743	Cache domain
AL541_RS18850	PF00005	ABC transporter
AL541_RS18855	PF01032	FecCD transport family
AL541_RS18860	PF01032	FecCD transport family
AL541_RS18865	PF01497	Periplasmic binding protein
AL541_RS18870	PF00593	TonB dependent receptor
AL541_RS18870	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS18875	PF00593	TonB dependent receptor
AL541_RS18875	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS18885	PF04183	IucA / IucC family
AL541_RS18885	PF06276	Ferric iron reductase FhuF-like transporter
AL541_RS18890	PF07690	Major Facilitator Superfamily
AL541_RS18895	PF04183	IucA / IucC family
AL541_RS18895	PF06276	Ferric iron reductase FhuF-like transporter
AL541_RS18900	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL541_RS18900	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL541_RS18905	PF13416	Bacterial extracellular solute-binding protein
AL541_RS18910	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS18915	PF00072	Response regulator receiver domain
AL541_RS18915	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS18925	PF00367	phosphotransferase system, EIIB
AL541_RS18925	PF02378	Phosphotransferase system, EIIC
AL541_RS18930	PF03625	Domain of unknown function DUF302
AL541_RS18935	PF01136	AL541_RS18935
AL541_RS18940	PF11730	AL541_RS18940
AL541_RS18945	PF00005	ABC transporter
AL541_RS18950	PF02687	AL541_RS18950
AL541_RS18955	PF07143	Hydroxyneurosporene synthase (CrtC)
AL541_RS18955	PF17186	AL541_RS18955
AL541_RS18960	PF11212	AL541_RS18960
AL541_RS18965	PF13302	Acetyltransferase (GNAT) domain
AL541_RS18970	PF12833	Helix-turn-helix domain
AL541_RS18975	PF06445	GyrI-like small molecule binding domain
AL541_RS18975	PF12833	Helix-turn-helix domain
AL541_RS18980	PF02698	DUF218 domain
AL541_RS18985	PF05016	Plasmid stabilisation system protein
AL541_RS18995	PF02566	OsmC-like protein
AL541_RS19000	PF01047	MarR family
AL541_RS19005	PF00578	AhpC/TSA family
AL541_RS19005	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL541_RS19010	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS19010	PF13192	Thioredoxin domain
AL541_RS19025	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AL541_RS19030	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS19035	PF00188	Cysteine-rich secretory protein family
AL541_RS19040	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS19040	PF03466	LysR substrate binding domain
AL541_RS19050	PF01965	DJ-1/PfpI family
AL541_RS19055	PF04542	Sigma-70 region 2
AL541_RS19055	PF08281	Sigma-70, region 4
AL541_RS19065	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS19070	PF12833	Helix-turn-helix domain
AL541_RS19075	PF03473	MOSC domain
AL541_RS19075	PF03475	3-alpha domain
AL541_RS19080	PF00270	DEAD/DEAH box helicase
AL541_RS19080	PF00271	Helicase conserved C-terminal domain
AL541_RS19085	PF02274	Amidinotransferase
AL541_RS19090	PF00005	ABC transporter
AL541_RS19090	PF00664	ABC transporter transmembrane region
AL541_RS19100	PF01037	AsnC family
AL541_RS19100	PF13412	Winged helix-turn-helix DNA-binding
AL541_RS19120	PF00076	RNA recognition motif
AL541_RS19125	PF13302	Acetyltransferase (GNAT) domain
AL541_RS19130	PF00474	Sodium:solute symporter family
AL541_RS19140	PF00171	Aldehyde dehydrogenase family
AL541_RS19140	PF01619	Proline dehydrogenase
AL541_RS19140	PF14850	DNA-binding domain of Proline dehydrogenase
AL541_RS19145	PF12833	Helix-turn-helix domain
AL541_RS19150	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS19150	PF08448	PAS fold
AL541_RS19155	PF01243	Pyridoxamine 5'-phosphate oxidase
AL541_RS19155	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL541_RS19160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS19160	PF02743	Cache domain
AL541_RS19165	PF00072	Response regulator receiver domain
AL541_RS19165	PF02954	Bacterial regulatory protein, Fis family
AL541_RS19170	PF13437	HlyD family secretion protein
AL541_RS19170	PF13533	Biotin-lipoyl like
AL541_RS19175	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
AL541_RS19180	PF00563	EAL domain
AL541_RS19180	PF00990	GGDEF domain
AL541_RS19180	PF16448	AL541_RS19180
AL541_RS19185	PF00005	ABC transporter
AL541_RS19185	PF00664	ABC transporter transmembrane region
AL541_RS19190	PF00924	Mechanosensitive ion channel
AL541_RS19195	PF03358	NADPH-dependent FMN reductase
AL541_RS19200	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS19205	PF00246	Zinc carboxypeptidase
AL541_RS19210	PF01380	SIS domain
AL541_RS19210	PF01418	Helix-turn-helix domain, rpiR family
AL541_RS19220	PF01380	SIS domain
AL541_RS19225	PF00367	phosphotransferase system, EIIB
AL541_RS19225	PF02378	Phosphotransferase system, EIIC
AL541_RS19235	PF03575	Peptidase family S51
AL541_RS19240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS19240	PF03466	LysR substrate binding domain
AL541_RS19245	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS19250	PF03961	AL541_RS19250
AL541_RS19255	PF05127	Helicase
AL541_RS19255	PF13718	GNAT acetyltransferase 2
AL541_RS19260	PF02195	ParB-like nuclease domain
AL541_RS19265	PF13614	AAA domain
AL541_RS19270	PF11826	AL541_RS19270
AL541_RS19280	PF00005	ABC transporter
AL541_RS19280	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL541_RS19285	PF00005	ABC transporter
AL541_RS19295	PF00925	GTP cyclohydrolase II
AL541_RS19295	PF08719	Domain of unknown function (DUF1768)
AL541_RS19300	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS19305	PF00072	Response regulator receiver domain
AL541_RS19305	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS19305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS19305	PF17149	AL541_RS19305
AL541_RS19310	PF11686	AL541_RS19310
AL541_RS19315	PF01709	Transcriptional regulator
AL541_RS19320	PF01098	AL541_RS19320
AL541_RS19330	PF00005	ABC transporter
AL541_RS19335	PF02687	AL541_RS19335
AL541_RS19335	PF12704	MacB-like periplasmic core domain
AL541_RS19340	PF17131	AL541_RS19340
AL541_RS19350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS19350	PF06580	AL541_RS19350
AL541_RS19355	PF00072	Response regulator receiver domain
AL541_RS19355	PF04397	LytTr DNA-binding domain
AL541_RS19360	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL541_RS19365	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS19365	PF17200	AL541_RS19365
AL541_RS19370	PF04134	AL541_RS19370
AL541_RS19375	PF14247	AL541_RS19375
AL541_RS19385	PF03616	AL541_RS19385
AL541_RS19395	PF00005	ABC transporter
AL541_RS19400	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS19405	PF03616	AL541_RS19405
AL541_RS19415	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL541_RS19420	PF11280	AL541_RS19420
AL541_RS19425	PF04219	AL541_RS19425
AL541_RS19430	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS19430	PF03466	LysR substrate binding domain
AL541_RS19435	PF02678	Pirin
AL541_RS19440	PF07681	AL541_RS19440
AL541_RS19450	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL541_RS19450	PF02805	Metal binding domain of Ada
AL541_RS19450	PF06029	AlkA N-terminal domain
AL541_RS19450	PF12833	Helix-turn-helix domain
AL541_RS19455	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL541_RS19455	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL541_RS19465	PF02588	AL541_RS19465
AL541_RS19470	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL541_RS19475	PF03600	Citrate transporter
AL541_RS19480	PF01757	AL541_RS19480
AL541_RS19485	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS19490	PF12146	Putative lysophospholipase
AL541_RS19495	PF00704	Glycosyl hydrolases family 18
AL541_RS19495	PF02839	Carbohydrate binding domain
AL541_RS19495	PF08329	Chitinase A, N-terminal domain
AL541_RS19500	PF11012	AL541_RS19500
AL541_RS19505	PF06865	Protein of unknown function (DUF1255)
AL541_RS19515	PF00990	GGDEF domain
AL541_RS19520	PF01554	MatE
AL541_RS19525	PF00849	RNA pseudouridylate synthase
AL541_RS19530	PF01323	DSBA-like thioredoxin domain
AL541_RS19535	PF00753	Metallo-beta-lactamase superfamily
AL541_RS19540	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS19540	PF03466	LysR substrate binding domain
AL541_RS19545	PF08282	haloacid dehalogenase-like hydrolase
AL541_RS19555	PF00990	GGDEF domain
AL541_RS19565	PF00756	Putative esterase
AL541_RS19570	PF00107	Zinc-binding dehydrogenase
AL541_RS19570	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS19575	PF00797	N-acetyltransferase
AL541_RS19580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS19580	PF03466	LysR substrate binding domain
AL541_RS19585	PF04954	Siderophore-interacting protein
AL541_RS19585	PF08021	Siderophore-interacting FAD-binding domain
AL541_RS19590	PF01810	AL541_RS19590
AL541_RS19595	PF01037	AsnC family
AL541_RS19595	PF13412	Winged helix-turn-helix DNA-binding
AL541_RS19600	PF03067	Chitin binding domain
AL541_RS19605	PF12710	haloacid dehalogenase-like hydrolase
AL541_RS19610	PF07883	Cupin domain
AL541_RS19615	PF00805	Pentapeptide repeats (8 copies)
AL541_RS19615	PF13599	Pentapeptide repeats (9 copies)
AL541_RS19620	PF03922	OmpW family
AL541_RS19625	PF16576	AL541_RS19625
AL541_RS19630	PF07690	Major Facilitator Superfamily
AL541_RS19635	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AL541_RS19640	PF12706	Beta-lactamase superfamily domain
AL541_RS19645	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS19650	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS19655	PF13642	protein structure with unknown function
AL541_RS19660	PF06041	Bacterial protein of unknown function (DUF924)
AL541_RS19665	PF01432	Peptidase family M3
AL541_RS19680	PF05651	AL541_RS19680
AL541_RS19680	PF13556	PucR C-terminal helix-turn-helix domain
AL541_RS19685	PF02447	AL541_RS19685
AL541_RS19690	PF02595	Glycerate kinase family
AL541_RS19695	PF00155	Aminotransferase class I and II
AL541_RS19695	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS19700	PF00892	EamA-like transporter family
AL541_RS19715	PF00583	Acetyltransferase (GNAT) family
AL541_RS19720	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS19725	PF00583	Acetyltransferase (GNAT) family
AL541_RS19730	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS19735	PF13302	Acetyltransferase (GNAT) domain
AL541_RS19740	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL541_RS19745	PF00384	Molybdopterin oxidoreductase
AL541_RS19745	PF01568	Molydopterin dinucleotide binding domain
AL541_RS19750	PF01569	PAP2 superfamily
AL541_RS19755	PF02581	Thiamine monophosphate synthase/TENI
AL541_RS19760	PF02110	Hydroxyethylthiazole kinase family
AL541_RS19765	PF03070	TENA/THI-4/PQQC family
AL541_RS19770	PF09084	NMT1/THI5 like
AL541_RS19775	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS19780	PF00005	ABC transporter
AL541_RS19785	PF08543	Phosphomethylpyrimidine kinase
AL541_RS19790	PF01523	Putative modulator of DNA gyrase
AL541_RS19795	PF01523	Putative modulator of DNA gyrase
AL541_RS19800	PF04013	Putative SAM-dependent RNA methyltransferase
AL541_RS19805	PF11286	AL541_RS19805
AL541_RS19855	PF10928	Protein of unknown function (DUF2810)
AL541_RS19860	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL541_RS19860	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL541_RS19865	PF03734	L,D-transpeptidase catalytic domain
AL541_RS19870	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL541_RS19875	PF00072	Response regulator receiver domain
AL541_RS19875	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS19880	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS19880	PF00672	HAMP domain
AL541_RS19880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS19880	PF16750	AL541_RS19880
AL541_RS19885	PF00593	TonB dependent receptor
AL541_RS19885	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS19890	PF11932	AL541_RS19890
AL541_RS19895	PF01618	AL541_RS19895
AL541_RS19900	PF01618	AL541_RS19900
AL541_RS19905	PF02472	Biopolymer transport protein ExbD/TolR
AL541_RS19910	PF03544	Gram-negative bacterial TonB protein C-terminal
AL541_RS19930	PF16357	AL541_RS19930
AL541_RS19935	PF10029	AL541_RS19935
AL541_RS19940	PF10670	AL541_RS19940
AL541_RS19955	PF01297	Periplasmic solute binding protein family
AL541_RS19960	PF00005	ABC transporter
AL541_RS19965	PF00950	AL541_RS19965
AL541_RS19975	PF13609	Gram-negative porin
AL541_RS19980	PF00326	Prolyl oligopeptidase family
AL541_RS19980	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL541_RS19985	PF07690	Major Facilitator Superfamily
AL541_RS19990	PF00491	Arginase family
AL541_RS19995	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL541_RS20000	PF00753	Metallo-beta-lactamase superfamily
AL541_RS20005	PF05618	Putative ATP-dependant zinc protease
AL541_RS20010	PF08443	RimK-like ATP-grasp domain
AL541_RS20020	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS20020	PF14246	AefR-like transcriptional repressor, C-terminal region
AL541_RS20025	PF12706	Beta-lactamase superfamily domain
AL541_RS20030	PF17263	AL541_RS20030
AL541_RS20035	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS20035	PF03466	LysR substrate binding domain
AL541_RS20040	PF04320	AL541_RS20040
AL541_RS20045	PF05787	Bacterial protein of unknown function (DUF839)
AL541_RS20050	PF00232	Glycosyl hydrolase family 1
AL541_RS20055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS20055	PF13426	PAS domain
AL541_RS20060	PF00072	Response regulator receiver domain
AL541_RS20060	PF00158	Sigma-54 interaction domain
AL541_RS20060	PF02954	Bacterial regulatory protein, Fis family
AL541_RS20065	PF00990	GGDEF domain
AL541_RS20070	PF05525	AL541_RS20070
AL541_RS20080	PF16868	AL541_RS20080
AL541_RS20085	PF06808	AL541_RS20085
AL541_RS20090	PF01266	FAD dependent oxidoreductase
AL541_RS20110	PF10617	AL541_RS20110
AL541_RS20115	PF02322	AL541_RS20115
AL541_RS20120	PF01654	AL541_RS20120
AL541_RS20125	PF03116	AL541_RS20125
AL541_RS20130	PF01212	Beta-eliminating lyase
AL541_RS20135	PF11140	AL541_RS20135
AL541_RS20150	PF01773	Na+ dependent nucleoside transporter N-terminus
AL541_RS20150	PF07662	Na+ dependent nucleoside transporter C-terminus
AL541_RS20150	PF07670	Nucleoside recognition
AL541_RS20155	PF12060	AL541_RS20155
AL541_RS20160	PF13532	2OG-Fe(II) oxygenase superfamily
AL541_RS20165	PF00990	GGDEF domain
AL541_RS20165	PF03924	CHASE domain
AL541_RS20170	PF01381	Helix-turn-helix
AL541_RS20170	PF06114	Domain of unknown function (DUF955)
AL541_RS20170	PF12268	AL541_RS20170
AL541_RS20180	PF00990	GGDEF domain
AL541_RS20185	PF00875	DNA photolyase
AL541_RS20185	PF03441	FAD binding domain of DNA photolyase
AL541_RS20190	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
AL541_RS20195	PF00106	short chain dehydrogenase
AL541_RS20200	PF10013	AL541_RS20200
AL541_RS20205	PF01625	Peptide methionine sulfoxide reductase
AL541_RS20205	PF01641	SelR domain
AL541_RS20210	PF02566	OsmC-like protein
AL541_RS20215	PF12464	Maltose acetyltransferase
AL541_RS20215	PF14602	Hexapeptide repeat of succinyl-transferase
AL541_RS20240	PF08279	HTH domain
AL541_RS20240	PF13280	AL541_RS20240
AL541_RS20250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS20250	PF03466	LysR substrate binding domain
AL541_RS20255	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS20260	PF00293	NUDIX domain
AL541_RS20270	PF09695	AL541_RS20270
AL541_RS20275	PF00194	Eukaryotic-type carbonic anhydrase
AL541_RS20280	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL541_RS20290	PF16576	AL541_RS20290
AL541_RS20295	PF00005	ABC transporter
AL541_RS20295	PF02687	AL541_RS20295
AL541_RS20295	PF12704	MacB-like periplasmic core domain
AL541_RS20300	PF02321	Outer membrane efflux protein
AL541_RS20310	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS20315	PF00657	GDSL-like Lipase/Acylhydrolase
AL541_RS20320	PF00082	Subtilase family
AL541_RS20320	PF01483	Proprotein convertase P-domain
AL541_RS20320	PF02225	PA domain
AL541_RS20320	PF05922	Peptidase inhibitor I9
AL541_RS20330	PF03611	AL541_RS20330
AL541_RS20335	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS20340	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS20345	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS20345	PF13377	Periplasmic binding protein-like domain
AL541_RS20350	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS20355	PF00202	Aminotransferase class-III
AL541_RS20360	PF00266	Aminotransferase class-V
AL541_RS20365	PF13343	Bacterial extracellular solute-binding protein
AL541_RS20370	PF00005	ABC transporter
AL541_RS20370	PF08402	TOBE domain
AL541_RS20375	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS20380	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS20380	PF07702	UTRA domain
AL541_RS20385	PF00892	EamA-like transporter family
AL541_RS20390	PF13505	Outer membrane protein beta-barrel domain
AL541_RS20395	PF04393	AL541_RS20395
AL541_RS20400	PF11777	AL541_RS20400
AL541_RS20405	PF01266	FAD dependent oxidoreductase
AL541_RS20410	PF00246	Zinc carboxypeptidase
AL541_RS20415	PF00691	OmpA family
AL541_RS20415	PF01389	OmpA-like transmembrane domain
AL541_RS20420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS20420	PF03466	LysR substrate binding domain
AL541_RS20425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS20425	PF03466	LysR substrate binding domain
AL541_RS20435	PF03313	AL541_RS20435
AL541_RS20435	PF03315	Serine dehydratase beta chain
AL541_RS20440	PF02698	DUF218 domain
AL541_RS20450	PF03891	AL541_RS20450
AL541_RS20455	PF00293	NUDIX domain
AL541_RS20460	PF01464	Transglycosylase SLT domain
AL541_RS20465	PF05130	FlgN protein
AL541_RS20470	PF04316	Anti-sigma-28 factor, FlgM
AL541_RS20475	PF13144	SAF-like
AL541_RS20480	PF00460	Flagella basal body rod protein
AL541_RS20485	PF00460	Flagella basal body rod protein
AL541_RS20485	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS20490	PF03963	AL541_RS20490
AL541_RS20490	PF13860	FlgD Ig-like domain
AL541_RS20490	PF13861	FlgD Tudor-like domain
AL541_RS20495	PF00460	Flagella basal body rod protein
AL541_RS20495	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS20495	PF07559	Flagellar basal body protein FlaE
AL541_RS20500	PF00460	Flagella basal body rod protein
AL541_RS20500	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS20505	PF00460	Flagella basal body rod protein
AL541_RS20505	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS20510	PF02107	AL541_RS20510
AL541_RS20515	PF02119	AL541_RS20515
AL541_RS20520	PF10135	AL541_RS20520
AL541_RS20525	PF00460	Flagella basal body rod protein
AL541_RS20525	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL541_RS20530	PF00669	Bacterial flagellin N-terminal helical region
AL541_RS20540	PF10101	AL541_RS20540
AL541_RS20545	PF00999	Sodium/hydrogen exchanger family
AL541_RS20545	PF02254	TrkA-N domain
AL541_RS20550	PF01070	FMN-dependent dehydrogenase
AL541_RS20555	PF11216	AL541_RS20555
AL541_RS20560	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL541_RS20565	PF00581	Rhodanese-like domain
AL541_RS20570	PF00166	Chaperonin 10 Kd subunit
AL541_RS20575	PF00118	TCP-1/cpn60 chaperonin family
AL541_RS20585	PF01810	AL541_RS20585
AL541_RS20595	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS20605	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS20610	PF12833	Helix-turn-helix domain
AL541_RS20615	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
AL541_RS20620	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
AL541_RS20625	PF13520	Amino acid permease
AL541_RS20630	PF03060	Nitronate monooxygenase
AL541_RS20635	PF01625	Peptide methionine sulfoxide reductase
AL541_RS20640	PF00455	AL541_RS20640
AL541_RS20640	PF08220	DeoR-like helix-turn-helix domain
AL541_RS20645	PF00892	EamA-like transporter family
AL541_RS20650	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS20655	PF00857	Isochorismatase family
AL541_RS20660	PF00293	NUDIX domain
AL541_RS20665	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL541_RS20675	PF05433	AL541_RS20675
AL541_RS20680	PF13489	Methyltransferase domain
AL541_RS20685	PF00892	EamA-like transporter family
AL541_RS20690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS20690	PF03466	LysR substrate binding domain
AL541_RS20695	PF01389	OmpA-like transmembrane domain
AL541_RS20700	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS20700	PF12793	AL541_RS20700
AL541_RS20705	PF06629	AL541_RS20705
AL541_RS20710	PF04170	NlpE N-terminal domain
AL541_RS20715	PF00005	ABC transporter
AL541_RS20720	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS20730	PF02001	AL541_RS20730
AL541_RS20735	PF02579	Dinitrogenase iron-molybdenum cofactor
AL541_RS20740	PF04400	AL541_RS20740
AL541_RS20745	PF01636	Phosphotransferase enzyme family
AL541_RS20755	PF00009	Elongation factor Tu GTP binding domain
AL541_RS20755	PF00679	Elongation factor G C-terminus
AL541_RS20755	PF03764	Elongation factor G, domain IV
AL541_RS20755	PF14492	Elongation Factor G, domain II
AL541_RS20765	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL541_RS20765	PF13378	Enolase C-terminal domain-like
AL541_RS20770	PF07755	Protein of unknown function (DUF1611)
AL541_RS20770	PF17396	AL541_RS20770
AL541_RS20775	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS20775	PF03466	LysR substrate binding domain
AL541_RS20785	PF07690	Major Facilitator Superfamily
AL541_RS20790	PF00376	MerR family regulatory protein
AL541_RS20790	PF09278	MerR, DNA binding
AL541_RS20795	PF09622	AL541_RS20795
AL541_RS20800	PF13181	Tetratricopeptide repeat
AL541_RS20805	PF04266	ASCH domain
AL541_RS20810	PF13649	Methyltransferase domain
AL541_RS20815	PF13091	PLD-like domain
AL541_RS20820	PF13437	HlyD family secretion protein
AL541_RS20820	PF13533	Biotin-lipoyl like
AL541_RS20825	PF00873	AcrB/AcrD/AcrF family
AL541_RS20845	PF00873	AcrB/AcrD/AcrF family
AL541_RS20855	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS20860	PF12710	haloacid dehalogenase-like hydrolase
AL541_RS20865	PF00005	ABC transporter
AL541_RS20865	PF08402	TOBE domain
AL541_RS20870	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS20875	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS20880	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL541_RS20885	PF13343	Bacterial extracellular solute-binding protein
AL541_RS20890	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS20890	PF07702	UTRA domain
AL541_RS20895	PF02028	BCCT family transporter
AL541_RS20915	PF13416	Bacterial extracellular solute-binding protein
AL541_RS20920	PF00579	tRNA synthetases class I (W and Y)
AL541_RS20925	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS20935	PF00391	PEP-utilising enzyme, mobile domain
AL541_RS20935	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL541_RS20935	PF02896	PEP-utilising enzyme, TIM barrel domain
AL541_RS20940	PF03618	AL541_RS20940
AL541_RS20945	PF00710	Asparaginase
AL541_RS20950	PF00709	Adenylosuccinate synthetase
AL541_RS20955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS20955	PF03466	LysR substrate binding domain
AL541_RS20960	PF12614	AL541_RS20960
AL541_RS20965	PF01810	AL541_RS20965
AL541_RS20970	PF09831	AL541_RS20970
AL541_RS20975	PF00202	Aminotransferase class-III
AL541_RS20980	PF00171	Aldehyde dehydrogenase family
AL541_RS20985	PF01037	AsnC family
AL541_RS20985	PF13412	Winged helix-turn-helix DNA-binding
AL541_RS20990	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL541_RS20995	PF00557	Metallopeptidase family M24
AL541_RS20995	PF01321	Creatinase/Prolidase N-terminal domain
AL541_RS21000	PF00155	Aminotransferase class I and II
AL541_RS21000	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS21005	PF12625	AL541_RS21005
AL541_RS21005	PF12833	Helix-turn-helix domain
AL541_RS21010	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS21015	PF12973	ChrR Cupin-like domain
AL541_RS21020	PF00107	Zinc-binding dehydrogenase
AL541_RS21020	PF08240	Alcohol dehydrogenase GroES-like domain
AL541_RS21025	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL541_RS21030	PF04399	Glutaredoxin 2, C terminal domain
AL541_RS21030	PF13417	Glutathione S-transferase, N-terminal domain
AL541_RS21035	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS21035	PF03466	LysR substrate binding domain
AL541_RS21040	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS21040	PF03466	LysR substrate binding domain
AL541_RS21045	PF17389	AL541_RS21045
AL541_RS21050	PF00270	DEAD/DEAH box helicase
AL541_RS21050	PF00271	Helicase conserved C-terminal domain
AL541_RS21065	PF13698	AL541_RS21065
AL541_RS21080	PF00155	Aminotransferase class I and II
AL541_RS21085	PF06445	GyrI-like small molecule binding domain
AL541_RS21085	PF12833	Helix-turn-helix domain
AL541_RS21090	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS21090	PF03466	LysR substrate binding domain
AL541_RS21095	PF00106	short chain dehydrogenase
AL541_RS21100	PF04325	Protein of unknown function (DUF465)
AL541_RS21105	PF12973	ChrR Cupin-like domain
AL541_RS21115	PF01297	Periplasmic solute binding protein family
AL541_RS21120	PF00950	AL541_RS21120
AL541_RS21125	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS21130	PF00082	Subtilase family
AL541_RS21130	PF04151	Bacterial pre-peptidase C-terminal domain
AL541_RS21130	PF05922	Peptidase inhibitor I9
AL541_RS21135	PF12759	AL541_RS21135
AL541_RS21140	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS21140	PF03466	LysR substrate binding domain
AL541_RS21145	PF00593	TonB dependent receptor
AL541_RS21145	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS21150	PF07859	alpha/beta hydrolase fold
AL541_RS21155	PF02264	LamB porin
AL541_RS21155	PF11471	AL541_RS21155
AL541_RS21160	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS21160	PF13377	Periplasmic binding protein-like domain
AL541_RS21165	PF00367	phosphotransferase system, EIIB
AL541_RS21165	PF02378	Phosphotransferase system, EIIC
AL541_RS21170	PF00294	pfkB family carbohydrate kinase
AL541_RS21175	PF00251	Glycosyl hydrolases family 32 N-terminal domain
AL541_RS21175	PF08244	Glycosyl hydrolases family 32 C terminal
AL541_RS21180	PF01872	RibD C-terminal domain
AL541_RS21185	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS21190	PF02798	Glutathione S-transferase, N-terminal domain
AL541_RS21190	PF13410	Glutathione S-transferase, C-terminal domain
AL541_RS21200	PF00768	D-alanyl-D-alanine carboxypeptidase
AL541_RS21200	PF07943	Penicillin-binding protein 5, C-terminal domain
AL541_RS21205	PF05036	Sporulation related domain
AL541_RS21210	PF08534	Redoxin
AL541_RS21215	PF00962	Adenosine/AMP deaminase
AL541_RS21230	PF00313	'Cold-shock' DNA-binding domain
AL541_RS21235	PF02678	Pirin
AL541_RS21235	PF05726	Pirin C-terminal cupin domain
AL541_RS21240	PF01734	Patatin-like phospholipase
AL541_RS21250	PF03733	AL541_RS21250
AL541_RS21255	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL541_RS21260	PF00884	Sulfatase
AL541_RS21260	PF08019	AL541_RS21260
AL541_RS21265	PF01219	Prokaryotic diacylglycerol kinase
AL541_RS21275	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS21275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS21280	PF00072	Response regulator receiver domain
AL541_RS21280	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS21285	PF16561	AL541_RS21285
AL541_RS21295	PF01323	DSBA-like thioredoxin domain
AL541_RS21305	PF11911	AL541_RS21305
AL541_RS21310	PF00255	Glutathione peroxidase
AL541_RS21315	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL541_RS21325	PF01553	Acyltransferase
AL541_RS21325	PF07690	Major Facilitator Superfamily
AL541_RS21335	PF13443	Cro/C1-type HTH DNA-binding domain
AL541_RS21340	PF01966	HD domain
AL541_RS21345	PF07969	Amidohydrolase family
AL541_RS21350	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL541_RS21355	PF01769	Divalent cation transporter
AL541_RS21355	PF03448	MgtE intracellular N domain
AL541_RS21360	PF03109	AL541_RS21360
AL541_RS21365	PF13533	Biotin-lipoyl like
AL541_RS21375	PF12625	AL541_RS21375
AL541_RS21375	PF12833	Helix-turn-helix domain
AL541_RS21390	PF00072	Response regulator receiver domain
AL541_RS21390	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS21395	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS21395	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS21400	PF12900	Pyridoxamine 5'-phosphate oxidase
AL541_RS21405	PF00155	Aminotransferase class I and II
AL541_RS21405	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS21410	PF13520	Amino acid permease
AL541_RS21420	PF01037	AsnC family
AL541_RS21420	PF13404	AsnC-type helix-turn-helix domain
AL541_RS21425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS21425	PF03466	LysR substrate binding domain
AL541_RS21430	PF01810	AL541_RS21430
AL541_RS21440	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL541_RS21440	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL541_RS21445	PF00072	Response regulator receiver domain
AL541_RS21445	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS21445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS21450	PF01554	MatE
AL541_RS21455	PF04363	AL541_RS21455
AL541_RS21465	PF04337	Protein of unknown function, DUF480
AL541_RS21470	PF01541	GIY-YIG catalytic domain
AL541_RS21480	PF13407	Periplasmic binding protein domain
AL541_RS21485	PF00072	Response regulator receiver domain
AL541_RS21485	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS21485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS21485	PF09308	LuxQ, periplasmic
AL541_RS21490	PF01047	MarR family
AL541_RS21495	PF13437	HlyD family secretion protein
AL541_RS21495	PF13533	Biotin-lipoyl like
AL541_RS21500	PF11168	AL541_RS21500
AL541_RS21510	PF00892	EamA-like transporter family
AL541_RS21515	PF01037	AsnC family
AL541_RS21515	PF13412	Winged helix-turn-helix DNA-binding
AL541_RS21520	PF13649	Methyltransferase domain
AL541_RS21535	PF08239	Bacterial SH3 domain
AL541_RS21545	PF02355	Protein export membrane protein
AL541_RS21545	PF07549	SecD/SecF GG Motif
AL541_RS21545	PF13721	SecD export protein N-terminal TM region
AL541_RS21550	PF02355	Protein export membrane protein
AL541_RS21550	PF07549	SecD/SecF GG Motif
AL541_RS21560	PF01810	AL541_RS21560
AL541_RS21565	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS21570	PF00108	Thiolase, N-terminal domain
AL541_RS21570	PF02803	Thiolase, C-terminal domain
AL541_RS21575	PF09361	AL541_RS21575
AL541_RS21580	PF07167	AL541_RS21580
AL541_RS21585	PF09574	AL541_RS21585
AL541_RS21590	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL541_RS21595	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AL541_RS21600	PF00384	Molybdopterin oxidoreductase
AL541_RS21600	PF01568	Molydopterin dinucleotide binding domain
AL541_RS21600	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL541_RS21605	PF03927	NapD protein
AL541_RS21610	PF12838	4Fe-4S dicluster domain
AL541_RS21615	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS21615	PF07730	Histidine kinase
AL541_RS21615	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL541_RS21620	PF00072	Response regulator receiver domain
AL541_RS21620	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS21635	PF01546	Peptidase family M20/M25/M40
AL541_RS21635	PF07687	Peptidase dimerisation domain
AL541_RS21640	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL541_RS21645	PF16576	AL541_RS21645
AL541_RS21650	PF00873	AcrB/AcrD/AcrF family
AL541_RS21655	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS21660	PF00472	RF-1 domain
AL541_RS21665	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS21670	PF00691	OmpA family
AL541_RS21670	PF13505	Outer membrane protein beta-barrel domain
AL541_RS21680	PF00793	DAHP synthetase I family
AL541_RS21685	PF07690	Major Facilitator Superfamily
AL541_RS21690	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS21690	PF08447	PAS fold
AL541_RS21695	PF00456	Transketolase, thiamine diphosphate binding domain
AL541_RS21695	PF02779	Transketolase, pyrimidine binding domain
AL541_RS21695	PF02780	Transketolase, C-terminal domain
AL541_RS21700	PF00923	Transaldolase
AL541_RS21715	PF04198	Putative sugar-binding domain
AL541_RS21720	PF00581	Rhodanese-like domain
AL541_RS21730	PF16130	AL541_RS21730
AL541_RS21735	PF00899	ThiF family
AL541_RS21740	PF00994	Probable molybdopterin binding domain
AL541_RS21740	PF03453	MoeA N-terminal region (domain I and II)
AL541_RS21740	PF03454	MoeA C-terminal region (domain IV)
AL541_RS21745	PF01227	GTP cyclohydrolase I
AL541_RS21750	PF03595	Voltage-dependent anion channel
AL541_RS21755	PF00654	Voltage gated chloride channel
AL541_RS21770	PF00248	Aldo/keto reductase family
AL541_RS21775	PF00072	Response regulator receiver domain
AL541_RS21780	PF00989	PAS fold
AL541_RS21785	PF01256	Carbohydrate kinase
AL541_RS21785	PF03853	YjeF-related protein N-terminus
AL541_RS21790	PF00478	IMP dehydrogenase / GMP reductase domain
AL541_RS21815	PF07971	Glycosyl hydrolase family 92
AL541_RS21820	PF07971	Glycosyl hydrolase family 92
AL541_RS21825	PF07971	Glycosyl hydrolase family 92
AL541_RS21830	PF07971	Glycosyl hydrolase family 92
AL541_RS21835	PF07971	Glycosyl hydrolase family 92
AL541_RS21840	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS21845	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS21850	PF01238	Phosphomannose isomerase type I
AL541_RS21855	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS21855	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS21855	PF02378	Phosphotransferase system, EIIC
AL541_RS21860	PF12833	Helix-turn-helix domain
AL541_RS21865	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS21870	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS21875	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS21875	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS21875	PF02378	Phosphotransferase system, EIIC
AL541_RS21900	PF01551	Peptidase family M23
AL541_RS21920	PF00691	OmpA family
AL541_RS21925	PF00158	Sigma-54 interaction domain
AL541_RS21925	PF02954	Bacterial regulatory protein, Fis family
AL541_RS21925	PF13185	GAF domain
AL541_RS21930	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS21930	PF07724	AAA domain (Cdc48 subfamily)
AL541_RS21930	PF10431	C-terminal, D2-small domain, of ClpB protein
AL541_RS21935	PF05638	Protein of unknown function (DUF796)
AL541_RS21940	PF05954	Phage late control gene D protein (GPD)
AL541_RS21955	PF09937	AL541_RS21955
AL541_RS21965	PF00069	Protein kinase domain
AL541_RS21970	PF06812	AL541_RS21970
AL541_RS21970	PF16989	AL541_RS21970
AL541_RS21975	PF05591	AL541_RS21975
AL541_RS21980	PF05943	AL541_RS21980
AL541_RS21985	PF04965	Gene 25-like lysozyme
AL541_RS21990	PF05947	AL541_RS21990
AL541_RS21995	PF06996	AL541_RS21995
AL541_RS22000	PF01037	AsnC family
AL541_RS22000	PF13404	AsnC-type helix-turn-helix domain
AL541_RS22005	PF06744	AL541_RS22005
AL541_RS22005	PF06761	AL541_RS22005
AL541_RS22005	PF14331	AL541_RS22005
AL541_RS22010	PF06812	AL541_RS22010
AL541_RS22020	PF00498	FHA domain
AL541_RS22025	PF12790	Type VI secretion lipoprotein
AL541_RS22030	PF05936	AL541_RS22030
AL541_RS22035	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AL541_RS22040	PF13665	AL541_RS22040
AL541_RS22065	PF07690	Major Facilitator Superfamily
AL541_RS22070	PF02311	AraC-like ligand binding domain
AL541_RS22070	PF12833	Helix-turn-helix domain
AL541_RS22075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS22075	PF03466	LysR substrate binding domain
AL541_RS22080	PF00106	short chain dehydrogenase
AL541_RS22085	PF00582	Universal stress protein family
AL541_RS22095	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AL541_RS22095	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AL541_RS22095	PF04039	AL541_RS22095
AL541_RS22095	PF13244	AL541_RS22095
AL541_RS22100	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AL541_RS22105	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AL541_RS22110	PF01899	AL541_RS22110
AL541_RS22115	PF04066	AL541_RS22115
AL541_RS22120	PF03334	AL541_RS22120
AL541_RS22125	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS22125	PF07702	UTRA domain
AL541_RS22130	PF02056	Family 4 glycosyl hydrolase
AL541_RS22130	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL541_RS22135	PF00367	phosphotransferase system, EIIB
AL541_RS22135	PF02378	Phosphotransferase system, EIIC
AL541_RS22140	PF00501	AMP-binding enzyme
AL541_RS22140	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS22145	PF00766	Electron transfer flavoprotein FAD-binding domain
AL541_RS22145	PF01012	Electron transfer flavoprotein domain
AL541_RS22150	PF01012	Electron transfer flavoprotein domain
AL541_RS22155	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
AL541_RS22155	PF13450	NAD(P)-binding Rossmann-like domain
AL541_RS22165	PF00005	ABC transporter
AL541_RS22165	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL541_RS22170	PF00501	AMP-binding enzyme
AL541_RS22175	PF02653	AL541_RS22175
AL541_RS22180	PF02653	AL541_RS22180
AL541_RS22185	PF13458	Periplasmic binding protein
AL541_RS22190	PF00005	ABC transporter
AL541_RS22195	PF00501	AMP-binding enzyme
AL541_RS22200	PF05724	Thiopurine S-methyltransferase (TPMT)
AL541_RS22230	PF02028	BCCT family transporter
AL541_RS22235	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS22240	PF00205	Thiamine pyrophosphate enzyme, central domain
AL541_RS22240	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL541_RS22240	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL541_RS22245	PF03306	Alpha-acetolactate decarboxylase
AL541_RS22250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS22250	PF03466	LysR substrate binding domain
AL541_RS22255	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS22265	PF10617	AL541_RS22265
AL541_RS22270	PF02322	AL541_RS22270
AL541_RS22275	PF01654	AL541_RS22275
AL541_RS22280	PF00155	Aminotransferase class I and II
AL541_RS22280	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS22285	PF12464	Maltose acetyltransferase
AL541_RS22285	PF14602	Hexapeptide repeat of succinyl-transferase
AL541_RS22295	PF00924	Mechanosensitive ion channel
AL541_RS22300	PF08895	AL541_RS22300
AL541_RS22305	PF00682	HMGL-like
AL541_RS22310	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AL541_RS22310	PF00364	Biotin-requiring enzyme
AL541_RS22310	PF02785	Biotin carboxylase C-terminal domain
AL541_RS22310	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL541_RS22315	PF00378	Enoyl-CoA hydratase/isomerase family
AL541_RS22320	PF01039	Carboxyl transferase domain
AL541_RS22325	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL541_RS22325	PF02770	Acyl-CoA dehydrogenase, middle domain
AL541_RS22325	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL541_RS22330	PF00376	MerR family regulatory protein
AL541_RS22330	PF09278	MerR, DNA binding
AL541_RS22335	PF00108	Thiolase, N-terminal domain
AL541_RS22335	PF02803	Thiolase, C-terminal domain
AL541_RS22340	PF00171	Aldehyde dehydrogenase family
AL541_RS22345	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL541_RS22345	PF02770	Acyl-CoA dehydrogenase, middle domain
AL541_RS22345	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL541_RS22350	PF00378	Enoyl-CoA hydratase/isomerase family
AL541_RS22355	PF16113	AL541_RS22355
AL541_RS22360	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL541_RS22360	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL541_RS22365	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS22370	PF00990	GGDEF domain
AL541_RS22370	PF13181	Tetratricopeptide repeat
AL541_RS22375	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS22375	PF13977	Bacterial transcriptional repressor
AL541_RS22380	PF00171	Aldehyde dehydrogenase family
AL541_RS22385	PF00732	GMC oxidoreductase
AL541_RS22385	PF05199	GMC oxidoreductase
AL541_RS22390	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL541_RS22395	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS22400	PF00005	ABC transporter
AL541_RS22405	PF00881	Nitroreductase family
AL541_RS22415	PF01145	SPFH domain / Band 7 family
AL541_RS22420	PF01957	NfeD-like C-terminal, partner-binding
AL541_RS22425	PF00034	Cytochrome c
AL541_RS22425	PF03150	Di-haem cytochrome c peroxidase
AL541_RS22430	PF00072	Response regulator receiver domain
AL541_RS22430	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS22430	PF01627	Hpt domain
AL541_RS22430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS22435	PF02566	OsmC-like protein
AL541_RS22440	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL541_RS22440	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AL541_RS22445	PF10974	AL541_RS22445
AL541_RS22450	PF04116	AL541_RS22450
AL541_RS22460	PF13590	Domain of unknown function (DUF4136)
AL541_RS22470	PF09335	AL541_RS22470
AL541_RS22485	PF13645	AL541_RS22485
AL541_RS22495	PF00563	EAL domain
AL541_RS22495	PF00990	GGDEF domain
AL541_RS22500	PF05025	RbsD / FucU transport protein family
AL541_RS22505	PF00005	ABC transporter
AL541_RS22510	PF02653	AL541_RS22510
AL541_RS22515	PF13407	Periplasmic binding protein domain
AL541_RS22520	PF00294	pfkB family carbohydrate kinase
AL541_RS22525	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS22525	PF13377	Periplasmic binding protein-like domain
AL541_RS22535	PF04973	AL541_RS22535
AL541_RS22540	PF01048	Phosphorylase superfamily
AL541_RS22545	PF00027	Cyclic nucleotide-binding domain
AL541_RS22550	PF01497	Periplasmic binding protein
AL541_RS22555	PF01032	FecCD transport family
AL541_RS22560	PF01032	FecCD transport family
AL541_RS22565	PF00005	ABC transporter
AL541_RS22570	PF13411	MerR HTH family regulatory protein
AL541_RS22575	PF12833	Helix-turn-helix domain
AL541_RS22580	PF00593	TonB dependent receptor
AL541_RS22580	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS22585	PF09981	Uncharacterized protein conserved in bacteria (DUF2218)
AL541_RS22590	PF10688	AL541_RS22590
AL541_RS22615	PF12805	AL541_RS22615
AL541_RS22615	PF13515	AL541_RS22615
AL541_RS22620	PF00580	UvrD/REP helicase N-terminal domain
AL541_RS22620	PF12462	AL541_RS22620
AL541_RS22620	PF13361	UvrD-like helicase C-terminal domain
AL541_RS22625	PF02142	MGS-like domain
AL541_RS22630	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL541_RS22635	PF00072	Response regulator receiver domain
AL541_RS22635	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS22635	PF01627	Hpt domain
AL541_RS22635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS22645	PF06934	AL541_RS22645
AL541_RS22650	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS22655	PF00884	Sulfatase
AL541_RS22655	PF14707	C-terminal region of aryl-sulfatase
AL541_RS22660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS22660	PF03466	LysR substrate binding domain
AL541_RS22665	PF00884	Sulfatase
AL541_RS22665	PF14707	C-terminal region of aryl-sulfatase
AL541_RS22670	PF04055	Radical SAM superfamily
AL541_RS22670	PF13186	Iron-sulfur cluster-binding domain
AL541_RS22675	PF07726	ATPase family associated with various cellular activities (AAA)
AL541_RS22680	PF01882	AL541_RS22680
AL541_RS22685	PF14316	AL541_RS22685
AL541_RS22690	PF00092	von Willebrand factor type A domain
AL541_RS22695	PF13519	von Willebrand factor type A domain
AL541_RS22700	PF13584	AL541_RS22700
AL541_RS22705	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL541_RS22710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS22710	PF03466	LysR substrate binding domain
AL541_RS22715	PF00781	Diacylglycerol kinase catalytic domain
AL541_RS22720	PF04076	Bacterial OB fold (BOF) protein
AL541_RS22725	PF13505	Outer membrane protein beta-barrel domain
AL541_RS22730	PF08774	VRR-NUC domain
AL541_RS22735	PF07690	Major Facilitator Superfamily
AL541_RS22745	PF03606	AL541_RS22745
AL541_RS22750	PF00487	AL541_RS22750
AL541_RS22755	PF00583	Acetyltransferase (GNAT) family
AL541_RS22760	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS22765	PF00072	Response regulator receiver domain
AL541_RS22765	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS22770	PF00155	Aminotransferase class I and II
AL541_RS22775	PF01926	50S ribosome-binding GTPase
AL541_RS22780	PF00072	Response regulator receiver domain
AL541_RS22780	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS22780	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS22780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS22785	PF00072	Response regulator receiver domain
AL541_RS22785	PF00563	EAL domain
AL541_RS22790	PF00072	Response regulator receiver domain
AL541_RS22790	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS22795	PF00990	GGDEF domain
AL541_RS22800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS22805	PF00072	Response regulator receiver domain
AL541_RS22805	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS22815	PF00072	Response regulator receiver domain
AL541_RS22815	PF01584	CheW-like domain
AL541_RS22820	PF07963	Prokaryotic N-terminal methylation motif
AL541_RS22825	PF01925	AL541_RS22825
AL541_RS22830	PF00892	EamA-like transporter family
AL541_RS22835	PF01124	MAPEG family
AL541_RS22845	PF03372	Endonuclease/Exonuclease/phosphatase family
AL541_RS22850	PF00893	Small Multidrug Resistance protein
AL541_RS22855	PF00892	EamA-like transporter family
AL541_RS22860	PF00293	NUDIX domain
AL541_RS22865	PF13302	Acetyltransferase (GNAT) domain
AL541_RS22870	PF00171	Aldehyde dehydrogenase family
AL541_RS22875	PF04073	Aminoacyl-tRNA editing domain
AL541_RS22880	PF01645	Conserved region in glutamate synthase
AL541_RS22880	PF09360	Iron-binding zinc finger CDGSH type
AL541_RS22885	PF00141	Peroxidase
AL541_RS22890	PF09722	AL541_RS22890
AL541_RS22895	PF08808	AL541_RS22895
AL541_RS22900	PF01757	AL541_RS22900
AL541_RS22905	PF03206	AL541_RS22905
AL541_RS22910	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL541_RS22915	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS22920	PF03061	Thioesterase superfamily
AL541_RS22925	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL541_RS22930	PF00582	Universal stress protein family
AL541_RS22935	PF01769	Divalent cation transporter
AL541_RS22935	PF03448	MgtE intracellular N domain
AL541_RS22945	PF13521	AAA domain
AL541_RS22970	PF01327	Polypeptide deformylase
AL541_RS22975	PF13411	MerR HTH family regulatory protein
AL541_RS22980	PF11158	AL541_RS22980
AL541_RS22985	PF02253	Phospholipase A1
AL541_RS22995	PF04307	AL541_RS22995
AL541_RS23005	PF00005	ABC transporter
AL541_RS23005	PF00664	ABC transporter transmembrane region
AL541_RS23015	PF00929	Exonuclease
AL541_RS23020	PF15575	AL541_RS23020
AL541_RS23025	PF01212	Beta-eliminating lyase
AL541_RS23030	PF16691	AL541_RS23030
AL541_RS23035	PF14317	AL541_RS23035
AL541_RS23045	PF01764	Lipase (class 3)
AL541_RS23055	PF01610	AL541_RS23055
AL541_RS23065	PF12833	Helix-turn-helix domain
AL541_RS23070	PF02627	Carboxymuconolactone decarboxylase family
AL541_RS23075	PF00892	EamA-like transporter family
AL541_RS23080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS23080	PF03466	LysR substrate binding domain
AL541_RS23085	PF00753	Metallo-beta-lactamase superfamily
AL541_RS23095	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL541_RS23100	PF02347	Glycine cleavage system P-protein
AL541_RS23105	PF01597	Glycine cleavage H-protein
AL541_RS23110	PF00464	Serine hydroxymethyltransferase
AL541_RS23115	PF01381	Helix-turn-helix
AL541_RS23115	PF07883	Cupin domain
AL541_RS23120	PF01571	Aminomethyltransferase folate-binding domain
AL541_RS23120	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL541_RS23125	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS23130	PF16576	AL541_RS23130
AL541_RS23135	PF13533	Biotin-lipoyl like
AL541_RS23140	PF00873	AcrB/AcrD/AcrF family
AL541_RS23150	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL541_RS23150	PF02378	Phosphotransferase system, EIIC
AL541_RS23155	PF00294	pfkB family carbohydrate kinase
AL541_RS23160	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL541_RS23160	PF00381	PTS HPr component phosphorylation site
AL541_RS23165	PF00356	Bacterial regulatory proteins, lacI family
AL541_RS23165	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL541_RS23170	PF03372	Endonuclease/Exonuclease/phosphatase family
AL541_RS23175	PF13275	S4 domain
AL541_RS23180	PF00563	EAL domain
AL541_RS23185	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS23190	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS23195	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS23200	PF00005	ABC transporter
AL541_RS23205	PF07947	AL541_RS23205
AL541_RS23210	PF00465	Iron-containing alcohol dehydrogenase
AL541_RS23215	PF06719	AL541_RS23215
AL541_RS23215	PF12833	Helix-turn-helix domain
AL541_RS23225	PF00704	Glycosyl hydrolases family 18
AL541_RS23225	PF06483	AL541_RS23225
AL541_RS23225	PF14600	Cellulose-binding domain
AL541_RS23230	PF00483	Nucleotidyl transferase
AL541_RS23235	PF01268	Formate--tetrahydrofolate ligase
AL541_RS23240	PF00294	pfkB family carbohydrate kinase
AL541_RS23245	PF05981	AL541_RS23245
AL541_RS23255	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS23265	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS23275	PF04336	AL541_RS23275
AL541_RS23280	PF00270	DEAD/DEAH box helicase
AL541_RS23280	PF00271	Helicase conserved C-terminal domain
AL541_RS23285	PF00563	EAL domain
AL541_RS23295	PF09932	AL541_RS23295
AL541_RS23300	PF01292	Prokaryotic cytochrome b561
AL541_RS23305	PF04264	YceI-like domain
AL541_RS23310	PF00571	CBS domain
AL541_RS23310	PF01226	Formate/nitrite transporter
AL541_RS23315	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS23315	PF03466	LysR substrate binding domain
AL541_RS23320	PF06496	AL541_RS23320
AL541_RS23325	PF11398	Protein of unknown function (DUF2813)
AL541_RS23330	PF00149	Calcineurin-like phosphoesterase
AL541_RS23330	PF02872	5'-nucleotidase, C-terminal domain
AL541_RS23335	PF03741	AL541_RS23335
AL541_RS23345	PF03831	PhnA protein
AL541_RS23345	PF08274	PhnA Zinc-Ribbon
AL541_RS23350	PF06004	Bacterial protein of unknown function (DUF903)
AL541_RS23355	PF12262	AL541_RS23355
AL541_RS23360	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL541_RS23370	PF01435	Peptidase family M48
AL541_RS23375	PF03061	Thioesterase superfamily
AL541_RS23380	PF11869	AL541_RS23380
AL541_RS23385	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS23385	PF12793	AL541_RS23385
AL541_RS23395	PF03091	CutA1 divalent ion tolerance protein
AL541_RS23400	PF09997	AL541_RS23400
AL541_RS23405	PF03171	2OG-Fe(II) oxygenase superfamily
AL541_RS23405	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
AL541_RS23410	PF00226	DnaJ domain
AL541_RS23410	PF12339	AL541_RS23410
AL541_RS23415	PF09818	Predicted ATPase of the ABC class
AL541_RS23420	PF00563	EAL domain
AL541_RS23420	PF00990	GGDEF domain
AL541_RS23420	PF13185	GAF domain
AL541_RS23425	PF07055	Enoyl reductase FAD binding domain
AL541_RS23425	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL541_RS23425	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL541_RS23430	PF13472	GDSL-like Lipase/Acylhydrolase family
AL541_RS23435	PF00005	ABC transporter
AL541_RS23445	PF01266	FAD dependent oxidoreductase
AL541_RS23450	PF02626	Allophanate hydrolase subunit 2
AL541_RS23455	PF02682	Allophanate hydrolase subunit 1
AL541_RS23460	PF03746	LamB/YcsF family
AL541_RS23465	PF00672	HAMP domain
AL541_RS23465	PF00989	PAS fold
AL541_RS23465	PF00990	GGDEF domain
AL541_RS23465	PF13426	PAS domain
AL541_RS23465	PF17152	AL541_RS23465
AL541_RS23470	PF16363	AL541_RS23470
AL541_RS23480	PF00593	TonB dependent receptor
AL541_RS23480	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS23485	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS23485	PF03466	LysR substrate binding domain
AL541_RS23490	PF00583	Acetyltransferase (GNAT) family
AL541_RS23490	PF13380	CoA binding domain
AL541_RS23490	PF13549	ATP-grasp domain
AL541_RS23490	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL541_RS23495	PF05036	Sporulation related domain
AL541_RS23500	PF01820	D-ala D-ala ligase N-terminus
AL541_RS23500	PF07478	D-ala D-ala ligase C-terminus
AL541_RS23505	PF11782	AL541_RS23505
AL541_RS23510	PF01253	Translation initiation factor SUI1
AL541_RS23515	PF12375	AL541_RS23515
AL541_RS23520	PF13175	AAA ATPase domain
AL541_RS23615	PF05840	AL541_RS23615
AL541_RS23665	PF00582	Universal stress protein family
AL541_RS23670	PF03701	AL541_RS23670
AL541_RS23675	PF13729	AL541_RS23675
AL541_RS23680	PF11060	AL541_RS23680
AL541_RS23685	PF00072	Response regulator receiver domain
AL541_RS23685	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS23690	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS23690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL541_RS23690	PF11884	Domain of unknown function (DUF3404)
AL541_RS23695	PF02233	NAD(P) transhydrogenase beta subunit
AL541_RS23700	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL541_RS23700	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL541_RS23700	PF12769	Domain of unknown function (DUF3814)
AL541_RS23705	PF10115	AL541_RS23705
AL541_RS23710	PF10719	AL541_RS23710
AL541_RS23715	PF00990	GGDEF domain
AL541_RS23720	PF00072	Response regulator receiver domain
AL541_RS23720	PF00990	GGDEF domain
AL541_RS23725	PF11269	Protein of unknown function (DUF3069)
AL541_RS23730	PF00005	ABC transporter
AL541_RS23730	PF03459	TOBE domain
AL541_RS23735	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS23740	PF13531	Bacterial extracellular solute-binding protein
AL541_RS23745	PF07685	CobB/CobQ-like glutamine amidotransferase domain
AL541_RS23745	PF13500	AAA domain
AL541_RS23750	PF04076	Bacterial OB fold (BOF) protein
AL541_RS23760	PF05618	Putative ATP-dependant zinc protease
AL541_RS23765	PF00155	Aminotransferase class I and II
AL541_RS23770	PF02311	AraC-like ligand binding domain
AL541_RS23770	PF12833	Helix-turn-helix domain
AL541_RS23775	PF01554	MatE
AL541_RS23780	PF13353	4Fe-4S single cluster domain
AL541_RS23785	PF03477	ATP cone domain
AL541_RS23785	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AL541_RS23795	PF03372	Endonuclease/Exonuclease/phosphatase family
AL541_RS23805	PF04143	AL541_RS23805
AL541_RS23810	PF01022	Bacterial regulatory protein, arsR family
AL541_RS23815	PF00581	Rhodanese-like domain
AL541_RS23815	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL541_RS23815	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS23820	PF01177	Asp/Glu/Hydantoin racemase
AL541_RS23825	PF02567	Phenazine biosynthesis-like protein
AL541_RS23830	PF04224	AL541_RS23830
AL541_RS23835	PF10517	AL541_RS23835
AL541_RS23840	PF00384	Molybdopterin oxidoreductase
AL541_RS23840	PF01568	Molydopterin dinucleotide binding domain
AL541_RS23850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS23850	PF03466	LysR substrate binding domain
AL541_RS23855	PF02634	FdhD/NarQ family
AL541_RS23860	PF07690	Major Facilitator Superfamily
AL541_RS23865	PF00072	Response regulator receiver domain
AL541_RS23865	PF00196	Bacterial regulatory proteins, luxR family
AL541_RS23870	PF05231	AL541_RS23870
AL541_RS23870	PF07730	Histidine kinase
AL541_RS23875	PF07690	Major Facilitator Superfamily
AL541_RS23880	PF01238	Phosphomannose isomerase type I
AL541_RS23885	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
AL541_RS23890	PF08811	AL541_RS23890
AL541_RS23895	PF07394	AL541_RS23895
AL541_RS23900	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL541_RS23900	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL541_RS23905	PF00085	Thioredoxin
AL541_RS23910	PF07690	Major Facilitator Superfamily
AL541_RS23915	PF11756	AL541_RS23915
AL541_RS23920	PF13302	Acetyltransferase (GNAT) domain
AL541_RS23925	PF11661	AL541_RS23925
AL541_RS23930	PF00593	TonB dependent receptor
AL541_RS23930	PF07715	TonB-dependent Receptor Plug Domain
AL541_RS23935	PF11575	AL541_RS23935
AL541_RS23945	PF03605	AL541_RS23945
AL541_RS23950	PF01936	NYN domain
AL541_RS23955	PF13778	AL541_RS23955
AL541_RS23960	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL541_RS23965	PF01226	Formate/nitrite transporter
AL541_RS23970	PF13806	Rieske-like [2Fe-2S] domain
AL541_RS23975	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL541_RS23975	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL541_RS23975	PF04324	BFD-like [2Fe-2S] binding domain
AL541_RS23975	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS23980	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL541_RS23980	PF14760	Rnk N-terminus
AL541_RS23990	PF00990	GGDEF domain
AL541_RS23990	PF08447	PAS fold
AL541_RS23995	PF09084	NMT1/THI5 like
AL541_RS24000	PF00990	GGDEF domain
AL541_RS24005	PF00296	Luciferase-like monooxygenase
AL541_RS24025	PF05235	CHAD domain
AL541_RS24030	PF01764	Lipase (class 3)
AL541_RS24040	PF00128	Alpha amylase, catalytic domain
AL541_RS24055	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS24055	PF12729	AL541_RS24055
AL541_RS24060	PF00842	Alanine racemase, C-terminal domain
AL541_RS24060	PF01168	Alanine racemase, N-terminal domain
AL541_RS24065	PF03591	AL541_RS24065
AL541_RS24070	PF05437	AL541_RS24070
AL541_RS24075	PF01565	FAD binding domain
AL541_RS24075	PF09330	D-lactate dehydrogenase, membrane binding
AL541_RS24080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS24080	PF03466	LysR substrate binding domain
AL541_RS24095	PF05762	VWA domain containing CoxE-like protein
AL541_RS24100	PF07728	AAA domain (dynein-related subfamily)
AL541_RS24100	PF12592	Protein of unknown function (DUF3763)
AL541_RS24105	PF00293	NUDIX domain
AL541_RS24110	PF01212	Beta-eliminating lyase
AL541_RS24115	PF00034	Cytochrome c
AL541_RS24120	PF03606	AL541_RS24120
AL541_RS24125	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL541_RS24130	PF08212	Lipocalin-like domain
AL541_RS24135	PF00031	Cystatin domain
AL541_RS24140	PF13476	AAA domain
AL541_RS24140	PF13558	Putative exonuclease SbcCD, C subunit
AL541_RS24145	PF00149	Calcineurin-like phosphoesterase
AL541_RS24145	PF12320	Type 5 capsule protein repressor C-terminal domain
AL541_RS24155	PF05488	PAAR motif
AL541_RS24160	PF05954	Phage late control gene D protein (GPD)
AL541_RS24165	PF05638	Protein of unknown function (DUF796)
AL541_RS24170	PF00004	ATPase family associated with various cellular activities (AAA)
AL541_RS24170	PF07724	AAA domain (Cdc48 subfamily)
AL541_RS24170	PF10431	C-terminal, D2-small domain, of ClpB protein
AL541_RS24175	PF06996	AL541_RS24175
AL541_RS24180	PF05947	AL541_RS24180
AL541_RS24185	PF04965	Gene 25-like lysozyme
AL541_RS24190	PF07024	ImpE protein
AL541_RS24195	PF05943	AL541_RS24195
AL541_RS24200	PF05943	AL541_RS24200
AL541_RS24205	PF05591	AL541_RS24205
AL541_RS24210	PF06812	AL541_RS24210
AL541_RS24215	PF13672	Protein phosphatase 2C
AL541_RS24220	PF09867	Uncharacterized protein conserved in bacteria (DUF2094)
AL541_RS24225	PF06744	AL541_RS24225
AL541_RS24225	PF06761	AL541_RS24225
AL541_RS24225	PF14331	AL541_RS24225
AL541_RS24230	PF00691	OmpA family
AL541_RS24230	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AL541_RS24235	PF05936	AL541_RS24235
AL541_RS24240	PF12790	Type VI secretion lipoprotein
AL541_RS24245	PF00498	FHA domain
AL541_RS24250	PF00069	Protein kinase domain
AL541_RS24255	PF01627	Hpt domain
AL541_RS24265	PF13581	Histidine kinase-like ATPase domain
AL541_RS24270	PF00072	Response regulator receiver domain
AL541_RS24270	PF07228	Stage II sporulation protein E (SpoIIE)
AL541_RS24280	PF00043	Glutathione S-transferase, C-terminal domain
AL541_RS24280	PF13417	Glutathione S-transferase, N-terminal domain
AL541_RS24285	PF00440	Bacterial regulatory proteins, tetR family
AL541_RS24290	PF03479	Domain of unknown function (DUF296)
AL541_RS24295	PF13806	Rieske-like [2Fe-2S] domain
AL541_RS24300	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL541_RS24300	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL541_RS24300	PF04324	BFD-like [2Fe-2S] binding domain
AL541_RS24300	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS24305	PF00005	ABC transporter
AL541_RS24310	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS24315	PF13379	NMT1-like family
AL541_RS24325	PF03861	ANTAR domain
AL541_RS24330	PF01738	Dienelactone hydrolase family
AL541_RS24335	PF00591	Glycosyl transferase family, a/b domain
AL541_RS24335	PF02885	Glycosyl transferase family, helical bundle domain
AL541_RS24340	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL541_RS24345	PF00384	Molybdopterin oxidoreductase
AL541_RS24345	PF01568	Molydopterin dinucleotide binding domain
AL541_RS24345	PF04324	BFD-like [2Fe-2S] binding domain
AL541_RS24345	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL541_RS24350	PF00583	Acetyltransferase (GNAT) family
AL541_RS24355	PF03222	Tryptophan/tyrosine permease family
AL541_RS24365	PF00990	GGDEF domain
AL541_RS24365	PF13374	Tetratricopeptide repeat
AL541_RS24375	PF00082	Subtilase family
AL541_RS24375	PF01483	Proprotein convertase P-domain
AL541_RS24385	PF06445	GyrI-like small molecule binding domain
AL541_RS24385	PF10604	Polyketide cyclase / dehydrase and lipid transport
AL541_RS24390	PF00512	His Kinase A (phospho-acceptor) domain
AL541_RS24395	PF00072	Response regulator receiver domain
AL541_RS24395	PF00486	Transcriptional regulatory protein, C terminal
AL541_RS24430	PF04314	Protein of unknown function (DUF461)
AL541_RS24435	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS24440	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL541_RS24440	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL541_RS24445	PF00474	Sodium:solute symporter family
AL541_RS24450	PF01081	KDPG and KHG aldolase
AL541_RS24455	PF00294	pfkB family carbohydrate kinase
AL541_RS24460	PF07883	Cupin domain
AL541_RS24465	PF05426	Alginate lyase
AL541_RS24465	PF07940	Heparinase II/III-like protein
AL541_RS24470	PF05426	Alginate lyase
AL541_RS24470	PF07940	Heparinase II/III-like protein
AL541_RS24475	PF08787	Alginate lyase
AL541_RS24480	PF00754	F5/8 type C domain
AL541_RS24480	PF08787	Alginate lyase
AL541_RS24485	PF06178	Oligogalacturonate-specific porin protein (KdgM)
AL541_RS24495	PF08787	Alginate lyase
AL541_RS24500	PF01554	MatE
AL541_RS24505	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS24505	PF07729	FCD domain
AL541_RS24510	PF00392	Bacterial regulatory proteins, gntR family
AL541_RS24510	PF07729	FCD domain
AL541_RS24515	PF00027	Cyclic nucleotide-binding domain
AL541_RS24515	PF00571	CBS domain
AL541_RS24515	PF03445	AL541_RS24515
AL541_RS24515	PF10335	AL541_RS24515
AL541_RS24520	PF00929	Exonuclease
AL541_RS24525	PF00474	Sodium:solute symporter family
AL541_RS24535	PF08883	Dopa 4,5-dioxygenase family
AL541_RS24540	PF00676	Dehydrogenase E1 component
AL541_RS24545	PF02779	Transketolase, pyrimidine binding domain
AL541_RS24545	PF02780	Transketolase, C-terminal domain
AL541_RS24550	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL541_RS24550	PF00364	Biotin-requiring enzyme
AL541_RS24550	PF02817	e3 binding domain
AL541_RS24555	PF00766	Electron transfer flavoprotein FAD-binding domain
AL541_RS24555	PF01012	Electron transfer flavoprotein domain
AL541_RS24560	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
AL541_RS24560	PF13450	NAD(P)-binding Rossmann-like domain
AL541_RS24565	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS24565	PF03466	LysR substrate binding domain
AL541_RS24570	PF01965	DJ-1/PfpI family
AL541_RS24575	PF13417	Glutathione S-transferase, N-terminal domain
AL541_RS24580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS24580	PF03466	LysR substrate binding domain
AL541_RS24585	PF00775	Dioxygenase
AL541_RS24590	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS24595	PF00528	Binding-protein-dependent transport system inner membrane component
AL541_RS24600	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS24605	PF00005	ABC transporter
AL541_RS24615	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL541_RS24620	PF12680	SnoaL-like domain
AL541_RS24625	PF12525	AL541_RS24625
AL541_RS24635	PF02028	BCCT family transporter
AL541_RS24640	PF01244	Membrane dipeptidase (Peptidase family M19)
AL541_RS24645	PF00171	Aldehyde dehydrogenase family
AL541_RS24650	PF01042	Endoribonuclease L-PSP
AL541_RS24655	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS24655	PF03466	LysR substrate binding domain
AL541_RS24660	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL541_RS24665	PF01040	UbiA prenyltransferase family
AL541_RS24670	PF03626	AL541_RS24670
AL541_RS24675	PF00510	Cytochrome c oxidase subunit III
AL541_RS24680	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL541_RS24685	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL541_RS24685	PF06481	COX Aromatic Rich Motif
AL541_RS24690	PF13561	Enoyl-(Acyl carrier protein) reductase
AL541_RS24695	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL541_RS24695	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL541_RS24700	PF16113	AL541_RS24700
AL541_RS24705	PF00378	Enoyl-CoA hydratase/isomerase family
AL541_RS24710	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL541_RS24710	PF02770	Acyl-CoA dehydrogenase, middle domain
AL541_RS24710	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL541_RS24715	PF00171	Aldehyde dehydrogenase family
AL541_RS24720	PF00108	Thiolase, N-terminal domain
AL541_RS24720	PF02803	Thiolase, C-terminal domain
AL541_RS24725	PF00376	MerR family regulatory protein
AL541_RS24725	PF09278	MerR, DNA binding
AL541_RS24730	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL541_RS24730	PF02770	Acyl-CoA dehydrogenase, middle domain
AL541_RS24730	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL541_RS24735	PF01039	Carboxyl transferase domain
AL541_RS24740	PF00378	Enoyl-CoA hydratase/isomerase family
AL541_RS24745	PF00682	HMGL-like
AL541_RS24750	PF00892	EamA-like transporter family
AL541_RS24755	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS24755	PF08447	PAS fold
AL541_RS24755	PF13426	PAS domain
AL541_RS24760	PF06146	AL541_RS24760
AL541_RS24765	PF01914	AL541_RS24765
AL541_RS24775	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL541_RS24780	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL541_RS24780	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AL541_RS24785	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL541_RS24785	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AL541_RS24795	PF01551	Peptidase family M23
AL541_RS24795	PF04225	Opacity-associated protein A LysM-like domain
AL541_RS24800	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL541_RS24805	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL541_RS24810	PF00132	Bacterial transferase hexapeptide (six repeats)
AL541_RS24815	PF01979	Amidohydrolase family
AL541_RS24820	PF01475	Ferric uptake regulator family
AL541_RS24825	PF08856	AL541_RS24825
AL541_RS24830	PF02311	AraC-like ligand binding domain
AL541_RS24830	PF12833	Helix-turn-helix domain
AL541_RS24835	PF01925	AL541_RS24835
AL541_RS24850	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
AL541_RS24855	PF01738	Dienelactone hydrolase family
AL541_RS24860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS24860	PF03466	LysR substrate binding domain
AL541_RS24865	PF00871	Acetokinase family
AL541_RS24880	PF00270	DEAD/DEAH box helicase
AL541_RS24880	PF00271	Helicase conserved C-terminal domain
AL541_RS24880	PF03880	DbpA RNA binding domain
AL541_RS24885	PF00575	S1 RNA binding domain
AL541_RS24885	PF00773	RNB domain
AL541_RS24885	PF08206	Ribonuclease B OB domain
AL541_RS24890	PF12833	Helix-turn-helix domain
AL541_RS24895	PF11225	AL541_RS24895
AL541_RS24900	PF12849	PBP superfamily domain
AL541_RS24905	PF01575	MaoC like domain
AL541_RS24915	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS24915	PF08447	PAS fold
AL541_RS24920	PF00005	ABC transporter
AL541_RS24925	PF00563	EAL domain
AL541_RS24925	PF12792	AL541_RS24925
AL541_RS24930	PF01614	Bacterial transcriptional regulator
AL541_RS24930	PF08279	HTH domain
AL541_RS24935	PF00491	Arginase family
AL541_RS24945	PF00270	DEAD/DEAH box helicase
AL541_RS24945	PF00271	Helicase conserved C-terminal domain
AL541_RS24950	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL541_RS24960	PF01470	Pyroglutamyl peptidase
AL541_RS24970	PF00313	'Cold-shock' DNA-binding domain
AL541_RS24980	PF00291	Pyridoxal-phosphate dependent enzyme
AL541_RS24985	PF11840	AL541_RS24985
AL541_RS24990	PF09905	Uncharacterized conserved protein (DUF2132)
AL541_RS24995	PF00270	DEAD/DEAH box helicase
AL541_RS24995	PF00271	Helicase conserved C-terminal domain
AL541_RS25000	PF07690	Major Facilitator Superfamily
AL541_RS25005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS25005	PF03466	LysR substrate binding domain
AL541_RS25015	PF12843	AL541_RS25015
AL541_RS25020	PF06945	AL541_RS25020
AL541_RS25020	PF14375	AL541_RS25020
AL541_RS25025	PF08888	HopJ type III effector protein
AL541_RS25035	PF01329	Pterin 4 alpha carbinolamine dehydratase
AL541_RS25040	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
AL541_RS25045	PF00501	AMP-binding enzyme
AL541_RS25045	PF13193	AMP-binding enzyme C-terminal domain
AL541_RS25045	PF16177	AL541_RS25045
AL541_RS25050	PF13489	Methyltransferase domain
AL541_RS25055	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS25055	PF03466	LysR substrate binding domain
AL541_RS25060	PF01545	Cation efflux family
AL541_RS25065	PF00892	EamA-like transporter family
AL541_RS25075	PF00465	Iron-containing alcohol dehydrogenase
AL541_RS25080	PF07995	Glucose / Sorbosone dehydrogenase
AL541_RS25085	PF02016	LD-carboxypeptidase
AL541_RS25090	PF13419	Haloacid dehalogenase-like hydrolase
AL541_RS25095	PF00210	Ferritin-like domain
AL541_RS25100	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS25100	PF00672	HAMP domain
AL541_RS25100	PF12729	AL541_RS25100
AL541_RS25120	PF13437	HlyD family secretion protein
AL541_RS25125	PF00072	Response regulator receiver domain
AL541_RS25130	PF02321	Outer membrane efflux protein
AL541_RS25135	PF00005	ABC transporter
AL541_RS25135	PF00664	ABC transporter transmembrane region
AL541_RS25140	PF00005	ABC transporter
AL541_RS25140	PF00664	ABC transporter transmembrane region
AL541_RS25150	PF00140	Sigma-70 factor, region 1
AL541_RS25150	PF04542	Sigma-70 region 2
AL541_RS25150	PF04545	Sigma-70, region 4
AL541_RS25155	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL541_RS25155	PF00990	GGDEF domain
AL541_RS25160	PF03889	AL541_RS25160
AL541_RS25165	PF00313	'Cold-shock' DNA-binding domain
AL541_RS25170	PF07152	YaeQ protein
AL541_RS25180	PF00462	Glutaredoxin
AL541_RS25185	PF00691	OmpA family
AL541_RS25190	PF13462	Thioredoxin
AL541_RS25195	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL541_RS25195	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL541_RS25200	PF01040	UbiA prenyltransferase family
AL541_RS25205	PF02628	AL541_RS25205
AL541_RS25215	PF02104	AL541_RS25215
AL541_RS25220	PF11137	AL541_RS25220
AL541_RS25225	PF00510	Cytochrome c oxidase subunit III
AL541_RS25230	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
AL541_RS25235	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL541_RS25240	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL541_RS25240	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AL541_RS25240	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL541_RS25245	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL541_RS25245	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL541_RS25245	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL541_RS25245	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL541_RS25250	PF00583	Acetyltransferase (GNAT) family
AL541_RS25255	PF01810	AL541_RS25255
AL541_RS25260	PF02311	AraC-like ligand binding domain
AL541_RS25260	PF12833	Helix-turn-helix domain
AL541_RS25265	PF03591	AL541_RS25265
AL541_RS25270	PF05437	AL541_RS25270
AL541_RS25275	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL541_RS25280	PF00267	Gram-negative porin
AL541_RS25285	PF13609	Gram-negative porin
AL541_RS25290	PF00892	EamA-like transporter family
AL541_RS25295	PF00462	Glutaredoxin
AL541_RS25310	PF07690	Major Facilitator Superfamily
AL541_RS25315	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS25315	PF03466	LysR substrate binding domain
AL541_RS25320	PF00563	EAL domain
AL541_RS25320	PF00990	GGDEF domain
AL541_RS25325	PF01551	Peptidase family M23
AL541_RS25325	PF04225	Opacity-associated protein A LysM-like domain
AL541_RS25335	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL541_RS25340	PF06912	AL541_RS25340
AL541_RS25350	PF07670	Nucleoside recognition
AL541_RS25355	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL541_RS25355	PF00672	HAMP domain
AL541_RS25355	PF02743	Cache domain
AL541_RS25365	PF03222	Tryptophan/tyrosine permease family
AL541_RS25375	PF13560	Helix-turn-helix domain
AL541_RS25385	PF03928	Domain of unknown function (DUF336)
AL541_RS25390	PF00248	Aldo/keto reductase family
AL541_RS25395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL541_RS25395	PF03466	LysR substrate binding domain
AL541_RS25400	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL541_RS25400	PF12793	AL541_RS25400
AL541_RS25405	PF08534	Redoxin
AL541_RS25415	PF01638	HxlR-like helix-turn-helix
AL541_RS25420	PF02525	Flavodoxin-like fold
AL541_RS25425	PF01022	Bacterial regulatory protein, arsR family
AL541_RS25430	PF01758	Sodium Bile acid symporter family
AL541_RS25435	PF12833	Helix-turn-helix domain
AL541_RS25440	PF01161	Phosphatidylethanolamine-binding protein
AL541_RS25445	PF02567	Phenazine biosynthesis-like protein
AL541_RS25450	PF13437	HlyD family secretion protein
AL541_RS25455	PF00005	ABC transporter
AL541_RS25460	PF12698	ABC-2 family transporter protein
AL541_RS25470	PF00384	Molybdopterin oxidoreductase
AL541_RS25470	PF01568	Molydopterin dinucleotide binding domain
AL541_RS25470	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL541_RS25470	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL541_RS25470	PF12838	4Fe-4S dicluster domain
AL541_RS25470	PF13510	2Fe-2S iron-sulfur cluster binding domain
AL541_RS25470	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL541_RS25480	PF02321	Outer membrane efflux protein
AL541_RS25485	PF11604	Copper binding periplasmic protein CusF
AL541_RS25485	PF16576	AL541_RS25485
AL541_RS25490	PF00873	AcrB/AcrD/AcrF family
AL541_RS25500	PF13354	Beta-lactamase enzyme family
AL541_RS25505	PF00990	GGDEF domain
AL541_RS25505	PF01590	GAF domain