K04M3_RS00005 SM00382 ATPases associated with a variety of cellular activities K04M3_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain K04M3_RS00010 SM00480 DNA polymerase III beta subunit K04M3_RS00020 SM00387 Histidine kinase-like ATPases K04M3_RS00020 SM00433 TopoisomeraseII K04M3_RS00045 SM00642 Alpha-amylase domain K04M3_RS00085 SM00829 Enoylreductase K04M3_RS00225 SM00382 ATPases associated with a variety of cellular activities K04M3_RS00250 SM00354 helix_turn _helix lactose operon repressor K04M3_RS00315 SM00344 helix_turn_helix ASNC type K04M3_RS00320 SM00052 Putative diguanylate phosphodiesterase K04M3_RS00320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M3_RS00320 SM00091 PAS domain K04M3_RS00320 SM00267 diguanylate cyclase K04M3_RS00360 SM00382 ATPases associated with a variety of cellular activities K04M3_RS00365 SM00749 bacterial OsmY and nodulation domain K04M3_RS00385 SM00046 Diacylglycerol kinase catalytic domain (presumed) K04M3_RS00385 SM00195 Dual specificity phosphatase, catalytic domain K04M3_RS00385 SM00404 Protein tyrosine phosphatase, catalytic domain motif K04M3_RS00420 SM00052 Putative diguanylate phosphodiesterase K04M3_RS00420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M3_RS00420 SM00091 PAS domain K04M3_RS00420 SM00267 diguanylate cyclase K04M3_RS00480 SM01004 Delta-aminolevulinic acid dehydratase K04M3_RS00495 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K04M3_RS00495 SM00474 3'-5' exonuclease K04M3_RS00495 SM00475 5'-3' exonuclease K04M3_RS00495 SM00482 DNA polymerase A domain K04M3_RS00530 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS00540 SM00052 Putative diguanylate phosphodiesterase K04M3_RS00540 SM00267 diguanylate cyclase K04M3_RS00540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS00545 SM00382 ATPases associated with a variety of cellular activities K04M3_RS00545 SM00448 cheY-homologous receiver domain K04M3_RS00550 SM00091 PAS domain K04M3_RS00550 SM00387 Histidine kinase-like ATPases K04M3_RS00550 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS00560 SM01230 K04M3_RS00560 K04M3_RS00610 SM00363 S4 RNA-binding domain K04M3_RS00625 SM00382 ATPases associated with a variety of cellular activities K04M3_RS00705 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS00705 SM00732 Likely ribonuclease with RNase H fold. K04M3_RS00725 SM00448 cheY-homologous receiver domain K04M3_RS00725 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS00730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS00730 SM00387 Histidine kinase-like ATPases K04M3_RS00730 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS00740 SM00487 DEAD-like helicases superfamily K04M3_RS00740 SM00490 helicase superfamily c-terminal domain K04M3_RS00750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS00750 SM00954 Region found in RelA / SpoT proteins K04M3_RS00755 SM01409 K04M3_RS00755 K04M3_RS00760 SM00072 Guanylate kinase homologues. K04M3_RS00765 SM00028 Tetratricopeptide repeats K04M3_RS00820 SM00382 ATPases associated with a variety of cellular activities K04M3_RS00825 SM00382 ATPases associated with a variety of cellular activities K04M3_RS00870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS00870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS00870 SM01049 K04M3_RS00870 K04M3_RS00895 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain K04M3_RS00895 SM01232 K04M3_RS00895 K04M3_RS00905 SM00672 Putative lipopolysaccharide-modifying enzyme. K04M3_RS01060 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M3_RS01060 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M3_RS01095 SM00849 Metallo-beta-lactamase superfamily K04M3_RS01095 SM01027 Beta-Casp domain K04M3_RS01140 SM00984 UDP binding domain K04M3_RS01245 SM00448 cheY-homologous receiver domain K04M3_RS01250 SM00091 PAS domain K04M3_RS01250 SM00387 Histidine kinase-like ATPases K04M3_RS01275 SM00764 Citrate lyase ligase C-terminal domain K04M3_RS01315 SM00382 ATPases associated with a variety of cellular activities K04M3_RS01315 SM01086 C-terminal, D2-small domain, of ClpB protein K04M3_RS01330 SM00354 helix_turn _helix lactose operon repressor K04M3_RS01335 SM00487 DEAD-like helicases superfamily K04M3_RS01335 SM00490 helicase superfamily c-terminal domain K04M3_RS01350 SM01403 K04M3_RS01350 K04M3_RS01370 SM01382 K04M3_RS01370 K04M3_RS01370 SM01383 K04M3_RS01370 K04M3_RS01385 SM00322 K homology RNA-binding domain K04M3_RS01405 SM01374 K04M3_RS01405 K04M3_RS01410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K04M3_RS01475 SM00363 S4 RNA-binding domain K04M3_RS01475 SM01390 K04M3_RS01475 K04M3_RS01480 SM00662 RNA polymerases D K04M3_RS01510 SM00487 DEAD-like helicases superfamily K04M3_RS01510 SM00490 helicase superfamily c-terminal domain K04M3_RS01565 SM00382 ATPases associated with a variety of cellular activities K04M3_RS01645 SM00382 ATPases associated with a variety of cellular activities K04M3_RS01745 SM00650 Ribosomal RNA adenine dimethylases K04M3_RS01765 SM00271 DnaJ molecular chaperone homology domain K04M3_RS01785 SM01329 K04M3_RS01785 K04M3_RS01790 SM00917 LeuA allosteric (dimerisation) domain K04M3_RS01805 SM00014 Acid phosphatase homologues K04M3_RS01835 SM00267 diguanylate cyclase K04M3_RS01840 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS01850 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M3_RS01850 SM01134 K04M3_RS01850 K04M3_RS01870 SM01120 K04M3_RS01870 K04M3_RS01900 SM00563 Phosphate acyltransferases K04M3_RS01930 SM00400 zinc finger K04M3_RS01930 SM00493 K04M3_RS01930 K04M3_RS01930 SM00766 DNA primase DnaG DnaB-binding K04M3_RS01955 SM01207 K04M3_RS01955 K04M3_RS01960 SM00905 Dihydroneopterin aldolase K04M3_RS01980 SM00382 ATPases associated with a variety of cellular activities K04M3_RS01995 SM00287 Bacterial SH3 domain homologues K04M3_RS02010 SM00880 K04M3_RS02010 K04M3_RS02010 SM01118 K04M3_RS02010 K04M3_RS02020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS02060 SM00387 Histidine kinase-like ATPases K04M3_RS02060 SM00433 TopoisomeraseII K04M3_RS02065 SM00434 DNA Topoisomerase IV K04M3_RS02070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M3_RS02075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M3_RS02135 SM00749 bacterial OsmY and nodulation domain K04M3_RS02225 SM00842 Cell division protein FtsA K04M3_RS02230 SM00864 Tubulin/FtsZ family, GTPase domain K04M3_RS02230 SM00865 Tubulin/FtsZ family, C-terminal domain K04M3_RS02245 SM00957 SecA DEAD-like domain K04M3_RS02245 SM00958 SecA preprotein cross-linking domain K04M3_RS02260 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain K04M3_RS02265 SM00851 MGS-like domain K04M3_RS02265 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K04M3_RS02335 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS02340 SM00091 PAS domain K04M3_RS02340 SM00267 diguanylate cyclase K04M3_RS02345 SM00073 Histidine Phosphotransfer domain K04M3_RS02345 SM00091 PAS domain K04M3_RS02345 SM00387 Histidine kinase-like ATPases K04M3_RS02345 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS02345 SM00448 cheY-homologous receiver domain K04M3_RS02355 SM00448 cheY-homologous receiver domain K04M3_RS02355 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS02410 SM00518 AP endonuclease family 2 K04M3_RS02420 SM00986 Uracil DNA glycosylase superfamily K04M3_RS02420 SM00987 UreE urease accessory protein, C-terminal domain K04M3_RS02445 SM00487 DEAD-like helicases superfamily K04M3_RS02445 SM00490 helicase superfamily c-terminal domain K04M3_RS02490 SM00382 ATPases associated with a variety of cellular activities K04M3_RS02510 SM00927 DNA mismatch repair enzyme MutH K04M3_RS02520 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M3_RS02540 SM01154 K04M3_RS02540 K04M3_RS02555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M3_RS02570 SM00904 Riboflavin kinase K04M3_RS02595 SM00226 Low molecular weight phosphatase family K04M3_RS02600 SM00448 cheY-homologous receiver domain K04M3_RS02600 SM00850 LytTr DNA-binding domain K04M3_RS02645 SM00830 Chorismate mutase type II K04M3_RS02660 SM00382 ATPases associated with a variety of cellular activities K04M3_RS02680 SM00830 Chorismate mutase type II K04M3_RS02690 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS02700 SM00363 S4 RNA-binding domain K04M3_RS02710 SM00382 ATPases associated with a variety of cellular activities K04M3_RS02710 SM01086 C-terminal, D2-small domain, of ClpB protein K04M3_RS02795 SM00448 cheY-homologous receiver domain K04M3_RS02795 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS02800 SM00091 PAS domain K04M3_RS02800 SM00387 Histidine kinase-like ATPases K04M3_RS02800 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS02830 SM00382 ATPases associated with a variety of cellular activities K04M3_RS02870 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS02875 SM00020 Trypsin-like serine protease K04M3_RS02890 SM01323 K04M3_RS02890 K04M3_RS02945 SM00271 DnaJ molecular chaperone homology domain K04M3_RS02970 SM00562 K04M3_RS02970 K04M3_RS02980 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS03000 SM00564 beta-propeller repeat K04M3_RS03005 SM00382 ATPases associated with a variety of cellular activities K04M3_RS03025 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS03025 SM01240 K04M3_RS03025 K04M3_RS03040 SM00028 Tetratricopeptide repeats K04M3_RS03105 SM00495 Chitin-binding domain type 3 K04M3_RS03240 SM00271 DnaJ molecular chaperone homology domain K04M3_RS03290 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS03295 SM01211 K04M3_RS03295 K04M3_RS03350 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K04M3_RS03400 SM00861 Transketolase, pyrimidine binding domain K04M3_RS03425 SM00981 K04M3_RS03425 K04M3_RS03450 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K04M3_RS03450 SM00475 5'-3' exonuclease K04M3_RS03460 SM00267 diguanylate cyclase K04M3_RS03465 SM00028 Tetratricopeptide repeats K04M3_RS03495 SM00382 ATPases associated with a variety of cellular activities K04M3_RS03495 SM00930 K04M3_RS03495 K04M3_RS03505 SM00354 helix_turn _helix lactose operon repressor K04M3_RS03515 SM00642 Alpha-amylase domain K04M3_RS03525 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS03540 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS03555 SM00936 Penicillin-binding protein 5, C-terminal domain K04M3_RS03610 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS03610 SM01091 Transporter associated domain K04M3_RS03625 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS03750 SM01400 K04M3_RS03750 K04M3_RS03770 SM00937 K04M3_RS03770 K04M3_RS03805 SM00363 S4 RNA-binding domain K04M3_RS03810 SM00463 Small MutS-related domain K04M3_RS03835 SM01081 Putative carbohydrate binding domain K04M3_RS03915 SM00858 K04M3_RS03915 K04M3_RS03920 SM00260 Two component signalling adaptor domain K04M3_RS03920 SM00448 cheY-homologous receiver domain K04M3_RS03925 SM00138 Methyltransferase, chemotaxis proteins K04M3_RS03970 SM00047 Lysozyme subfamily 2 K04M3_RS04035 SM00771 ZipA, C-terminal domain (FtsZ-binding) K04M3_RS04040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M3_RS04040 SM00292 breast cancer carboxy-terminal domain K04M3_RS04040 SM00532 Ligase N family K04M3_RS04060 SM00244 prohibitin homologues K04M3_RS04100 SM00028 Tetratricopeptide repeats K04M3_RS04130 SM00938 Nitrogen regulatory protein P-II K04M3_RS04135 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS04165 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS04170 SM00387 Histidine kinase-like ATPases K04M3_RS04190 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K04M3_RS04300 SM00861 Transketolase, pyrimidine binding domain K04M3_RS04315 SM00881 CoA binding domain K04M3_RS04325 SM00382 ATPases associated with a variety of cellular activities K04M3_RS04335 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS04340 SM00899 K04M3_RS04340 K04M3_RS04365 SM00836 DALR anticodon binding domain K04M3_RS04365 SM01016 Arginyl tRNA synthetase N terminal dom K04M3_RS04380 SM00020 Trypsin-like serine protease K04M3_RS04390 SM00487 DEAD-like helicases superfamily K04M3_RS04390 SM00491 K04M3_RS04390 K04M3_RS04420 SM00474 3'-5' exonuclease K04M3_RS04475 SM00825 Beta-ketoacyl synthase K04M3_RS04480 SM00822 K04M3_RS04480 K04M3_RS04490 SM00825 Beta-ketoacyl synthase K04M3_RS04550 SM00563 Phosphate acyltransferases K04M3_RS04580 SM00487 DEAD-like helicases superfamily K04M3_RS04580 SM00490 helicase superfamily c-terminal domain K04M3_RS04630 SM00382 ATPases associated with a variety of cellular activities K04M3_RS04630 SM00448 cheY-homologous receiver domain K04M3_RS04635 SM00387 Histidine kinase-like ATPases K04M3_RS04635 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS04655 SM00382 ATPases associated with a variety of cellular activities K04M3_RS04655 SM00994 ClpX C4-type zinc finger K04M3_RS04655 SM01086 C-terminal, D2-small domain, of ClpB protein K04M3_RS04660 SM00382 ATPases associated with a variety of cellular activities K04M3_RS04660 SM00464 Found in ATP-dependent protease La (LON) K04M3_RS04665 SM00411 bacterial (prokaryotic) histone like domain K04M3_RS04675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M3_RS04685 SM01144 K04M3_RS04685 K04M3_RS04690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS04695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS04725 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K04M3_RS04745 SM00563 Phosphate acyltransferases K04M3_RS04755 SM00978 K04M3_RS04755 K04M3_RS04815 SM00344 helix_turn_helix ASNC type K04M3_RS04845 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS04845 SM00267 diguanylate cyclase K04M3_RS04860 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS04880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS04880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS04930 SM00487 DEAD-like helicases superfamily K04M3_RS04930 SM00490 helicase superfamily c-terminal domain K04M3_RS04930 SM00982 K04M3_RS04930 K04M3_RS04930 SM01058 CarD-like/TRCF domain K04M3_RS04945 SM00382 ATPases associated with a variety of cellular activities K04M3_RS04960 SM00849 Metallo-beta-lactamase superfamily K04M3_RS04965 SM00382 ATPases associated with a variety of cellular activities K04M3_RS04995 SM00763 PrkA AAA domain K04M3_RS05040 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05045 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS05045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M3_RS05060 SM01276 K04M3_RS05060 K04M3_RS05085 SM00491 K04M3_RS05085 K04M3_RS05115 SM00357 Cold shock protein domain K04M3_RS05125 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05125 SM01086 C-terminal, D2-small domain, of ClpB protein K04M3_RS05130 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS05160 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M3_RS05160 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M3_RS05160 SM00493 K04M3_RS05160 K04M3_RS05195 SM00354 helix_turn _helix lactose operon repressor K04M3_RS05205 SM00448 cheY-homologous receiver domain K04M3_RS05205 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS05290 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M3_RS05295 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05350 SM00028 Tetratricopeptide repeats K04M3_RS05385 SM00387 Histidine kinase-like ATPases K04M3_RS05385 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS05385 SM00448 cheY-homologous receiver domain K04M3_RS05435 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M3_RS05465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS05490 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M3_RS05490 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M3_RS05495 SM00344 helix_turn_helix ASNC type K04M3_RS05500 SM00843 K04M3_RS05500 K04M3_RS05510 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05540 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS05540 SM00876 Biotin and Thiamin Synthesis associated domain K04M3_RS05635 SM00528 Domain in histone-like proteins of HNS family K04M3_RS05690 SM00052 Putative diguanylate phosphodiesterase K04M3_RS05705 SM00840 K04M3_RS05705 K04M3_RS05780 SM01131 K04M3_RS05780 K04M3_RS05790 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05795 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05815 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05870 SM00155 Phospholipase D. Active site motifs. K04M3_RS05900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M3_RS05900 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05915 SM00382 ATPases associated with a variety of cellular activities K04M3_RS05960 SM00387 Histidine kinase-like ATPases K04M3_RS05965 SM00448 cheY-homologous receiver domain K04M3_RS05965 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS05975 SM00487 DEAD-like helicases superfamily K04M3_RS05975 SM00490 helicase superfamily c-terminal domain K04M3_RS05980 SM00363 S4 RNA-binding domain K04M3_RS06010 SM00382 ATPases associated with a variety of cellular activities K04M3_RS06110 SM00448 cheY-homologous receiver domain K04M3_RS06115 SM00387 Histidine kinase-like ATPases K04M3_RS06135 SM00382 ATPases associated with a variety of cellular activities K04M3_RS06140 SM00382 ATPases associated with a variety of cellular activities K04M3_RS06165 SM00267 diguanylate cyclase K04M3_RS06180 SM00919 Malic enzyme, NAD binding domain K04M3_RS06180 SM01274 K04M3_RS06180 K04M3_RS06185 SM00487 DEAD-like helicases superfamily K04M3_RS06185 SM00490 helicase superfamily c-terminal domain K04M3_RS06270 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS06270 SM00866 K04M3_RS06270 K04M3_RS06285 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M3_RS06310 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS06345 SM00873 B3/4 domain K04M3_RS06345 SM00874 tRNA synthetase B5 domain K04M3_RS06345 SM00896 Ferredoxin-fold anticodon binding domain K04M3_RS06355 SM00411 bacterial (prokaryotic) histone like domain K04M3_RS06390 SM00479 K04M3_RS06390 K04M3_RS06640 SM00855 Phosphoglycerate mutase family K04M3_RS06660 SM00382 ATPases associated with a variety of cellular activities K04M3_RS06705 SM00245 tail specific protease K04M3_RS06715 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS06715 SM00895 K04M3_RS06715 K04M3_RS06745 SM01130 K04M3_RS06745 K04M3_RS06750 SM00382 ATPases associated with a variety of cellular activities K04M3_RS06770 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K04M3_RS06780 SM00382 ATPases associated with a variety of cellular activities K04M3_RS06785 SM00382 ATPases associated with a variety of cellular activities K04M3_RS06920 SM01230 K04M3_RS06920 K04M3_RS06935 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS07070 SM01230 K04M3_RS07070 K04M3_RS07085 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS07120 SM00052 Putative diguanylate phosphodiesterase K04M3_RS07130 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M3_RS07160 SM00387 Histidine kinase-like ATPases K04M3_RS07160 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS07160 SM00448 cheY-homologous receiver domain K04M3_RS07165 SM00052 Putative diguanylate phosphodiesterase K04M3_RS07165 SM00267 diguanylate cyclase K04M3_RS07175 SM00028 Tetratricopeptide repeats K04M3_RS07205 SM00857 Resolvase, N terminal domain K04M3_RS07210 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS07235 SM00857 Resolvase, N terminal domain K04M3_RS07385 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07390 SM00100 Cyclic nucleotide-monophosphate binding domain K04M3_RS07390 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS07395 SM00479 K04M3_RS07395 K04M3_RS07430 SM00028 Tetratricopeptide repeats K04M3_RS07470 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07495 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M3_RS07495 SM01134 K04M3_RS07495 K04M3_RS07510 SM00267 diguanylate cyclase K04M3_RS07535 SM00100 Cyclic nucleotide-monophosphate binding domain K04M3_RS07535 SM00387 Histidine kinase-like ATPases K04M3_RS07540 SM00448 cheY-homologous receiver domain K04M3_RS07545 SM00052 Putative diguanylate phosphodiesterase K04M3_RS07545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M3_RS07545 SM00091 PAS domain K04M3_RS07545 SM00267 diguanylate cyclase K04M3_RS07550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS07580 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. K04M3_RS07585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS07610 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07635 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07640 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07695 SM00267 diguanylate cyclase K04M3_RS07695 SM01079 K04M3_RS07695 K04M3_RS07700 SM00479 K04M3_RS07700 K04M3_RS07735 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07735 SM00487 DEAD-like helicases superfamily K04M3_RS07735 SM00490 helicase superfamily c-terminal domain K04M3_RS07735 SM00847 Helicase associated domain (HA2) Add an annotation K04M3_RS07810 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07810 SM00448 cheY-homologous receiver domain K04M3_RS07875 SM00448 cheY-homologous receiver domain K04M3_RS07880 SM00267 diguanylate cyclase K04M3_RS07895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS07925 SM01144 K04M3_RS07925 K04M3_RS07940 SM00852 Probable molybdopterin binding domain K04M3_RS07950 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07965 SM00382 ATPases associated with a variety of cellular activities K04M3_RS07965 SM00448 cheY-homologous receiver domain K04M3_RS07970 SM00387 Histidine kinase-like ATPases K04M3_RS07970 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS07975 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08010 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M3_RS08070 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08100 SM00100 Cyclic nucleotide-monophosphate binding domain K04M3_RS08100 SM00419 helix_turn_helix, cAMP Regulatory protein K04M3_RS08150 SM00897 FIST N domain K04M3_RS08150 SM01204 K04M3_RS08150 K04M3_RS08155 SM00387 Histidine kinase-like ATPases K04M3_RS08155 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS08155 SM00448 cheY-homologous receiver domain K04M3_RS08200 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08210 SM00981 K04M3_RS08210 K04M3_RS08245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M3_RS08245 SM00245 tail specific protease K04M3_RS08250 SM00945 ProQ/FINO family K04M3_RS08260 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08315 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS08330 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS08365 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K04M3_RS08370 SM00327 von Willebrand factor (vWF) type A domain K04M3_RS08385 SM00112 Cadherin repeats. K04M3_RS08385 SM00237 Domains in Na-Ca exchangers and integrin-beta4 K04M3_RS08385 SM00327 von Willebrand factor (vWF) type A domain K04M3_RS08385 SM00736 Dystroglycan-type cadherin-like domains. K04M3_RS08405 SM00028 Tetratricopeptide repeats K04M3_RS08405 SM00267 diguanylate cyclase K04M3_RS08410 SM00346 helix_turn_helix isocitrate lyase regulation K04M3_RS08450 SM00829 Enoylreductase K04M3_RS08455 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS08465 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS08465 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M3_RS08475 SM00829 Enoylreductase K04M3_RS08485 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08495 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS08495 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M3_RS08545 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS08570 SM00020 Trypsin-like serine protease K04M3_RS08570 SM00495 Chitin-binding domain type 3 K04M3_RS08605 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS08605 SM00895 K04M3_RS08605 K04M3_RS08705 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08745 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS08845 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS08870 SM00382 ATPases associated with a variety of cellular activities K04M3_RS08885 SM01350 K04M3_RS08885 K04M3_RS08900 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS08900 SM00871 Bacterial transcription activator, effector binding domain K04M3_RS08910 SM00448 cheY-homologous receiver domain K04M3_RS08915 SM00091 PAS domain K04M3_RS08915 SM00387 Histidine kinase-like ATPases K04M3_RS09045 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M3_RS09055 SM01266 K04M3_RS09055 K04M3_RS09245 SM00547 Zinc finger domain K04M3_RS09255 SM00507 HNH nucleases K04M3_RS09355 SM00267 diguanylate cyclase K04M3_RS09480 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M3_RS09495 SM00387 Histidine kinase-like ATPases K04M3_RS09495 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS09495 SM00448 cheY-homologous receiver domain K04M3_RS09505 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS09545 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS09575 SM00052 Putative diguanylate phosphodiesterase K04M3_RS09580 SM00421 helix_turn_helix, Lux Regulon K04M3_RS09580 SM00448 cheY-homologous receiver domain K04M3_RS09660 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS09660 SM00387 Histidine kinase-like ATPases K04M3_RS09660 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS09660 SM00448 cheY-homologous receiver domain K04M3_RS09665 SM00421 helix_turn_helix, Lux Regulon K04M3_RS09665 SM00448 cheY-homologous receiver domain K04M3_RS09680 SM00528 Domain in histone-like proteins of HNS family K04M3_RS09685 SM00344 helix_turn_helix ASNC type K04M3_RS09905 SM00091 PAS domain K04M3_RS09905 SM00382 ATPases associated with a variety of cellular activities K04M3_RS09935 SM00387 Histidine kinase-like ATPases K04M3_RS09935 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS09935 SM00448 cheY-homologous receiver domain K04M3_RS09960 SM00052 Putative diguanylate phosphodiesterase K04M3_RS09975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS09975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS09990 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS10015 SM00100 Cyclic nucleotide-monophosphate binding domain K04M3_RS10015 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS10020 SM00479 K04M3_RS10020 K04M3_RS10025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS10025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS10035 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M3_RS10040 SM00421 helix_turn_helix, Lux Regulon K04M3_RS10040 SM00448 cheY-homologous receiver domain K04M3_RS10045 SM00387 Histidine kinase-like ATPases K04M3_RS10045 SM01049 K04M3_RS10045 K04M3_RS10075 SM00849 Metallo-beta-lactamase superfamily K04M3_RS10165 SM00434 DNA Topoisomerase IV K04M3_RS10190 SM00852 Probable molybdopterin binding domain K04M3_RS10250 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M3_RS10250 SM00465 GIY-YIG type nucleases (URI domain) K04M3_RS10255 SM00421 helix_turn_helix, Lux Regulon K04M3_RS10255 SM00448 cheY-homologous receiver domain K04M3_RS10260 SM00486 DNA polymerase type-B family K04M3_RS10270 SM00841 Elongation factor P, C-terminal K04M3_RS10270 SM01185 K04M3_RS10270 K04M3_RS10280 SM00363 S4 RNA-binding domain K04M3_RS10295 SM00481 DNA polymerase alpha chain like domain K04M3_RS10335 SM00100 Cyclic nucleotide-monophosphate binding domain K04M3_RS10335 SM00419 helix_turn_helix, cAMP Regulatory protein K04M3_RS10360 SM00387 Histidine kinase-like ATPases K04M3_RS10360 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS10360 SM00448 cheY-homologous receiver domain K04M3_RS10410 SM00052 Putative diguanylate phosphodiesterase K04M3_RS10410 SM00091 PAS domain K04M3_RS10415 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS10445 SM00448 cheY-homologous receiver domain K04M3_RS10445 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS10450 SM00387 Histidine kinase-like ATPases K04M3_RS10450 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS10500 SM00382 ATPases associated with a variety of cellular activities K04M3_RS10560 SM00421 helix_turn_helix, Lux Regulon K04M3_RS10560 SM00448 cheY-homologous receiver domain K04M3_RS10565 SM00387 Histidine kinase-like ATPases K04M3_RS10565 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS10580 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M3_RS10625 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family K04M3_RS10630 SM00028 Tetratricopeptide repeats K04M3_RS10640 SM00411 bacterial (prokaryotic) histone like domain K04M3_RS10645 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS10660 SM00822 K04M3_RS10660 K04M3_RS10675 SM00481 DNA polymerase alpha chain like domain K04M3_RS10680 SM00260 Two component signalling adaptor domain K04M3_RS10680 SM00448 cheY-homologous receiver domain K04M3_RS10755 SM00825 Beta-ketoacyl synthase K04M3_RS10765 SM00822 K04M3_RS10765 K04M3_RS10770 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. K04M3_RS10800 SM00363 S4 RNA-binding domain K04M3_RS10810 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS10825 SM00226 Low molecular weight phosphatase family K04M3_RS10870 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS10895 SM00267 diguanylate cyclase K04M3_RS10900 SM00642 Alpha-amylase domain K04M3_RS10905 SM00382 ATPases associated with a variety of cellular activities K04M3_RS10945 SM00382 ATPases associated with a variety of cellular activities K04M3_RS10950 SM00382 ATPases associated with a variety of cellular activities K04M3_RS10985 SM00852 Probable molybdopterin binding domain K04M3_RS10990 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS11005 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11005 SM00448 cheY-homologous receiver domain K04M3_RS11010 SM00487 DEAD-like helicases superfamily K04M3_RS11010 SM00490 helicase superfamily c-terminal domain K04M3_RS11045 SM00900 K04M3_RS11045 K04M3_RS11055 SM00478 endonuclease III K04M3_RS11055 SM00525 K04M3_RS11055 K04M3_RS11075 SM00479 K04M3_RS11075 K04M3_RS11140 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M3_RS11195 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M3_RS11195 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M3_RS11195 SM00493 K04M3_RS11195 K04M3_RS11220 SM00870 K04M3_RS11220 K04M3_RS11240 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M3_RS11250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS11250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS11270 SM00098 Alkaline phosphatase homologues K04M3_RS11315 SM00493 K04M3_RS11315 K04M3_RS11325 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11345 SM00448 cheY-homologous receiver domain K04M3_RS11395 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M3_RS11410 SM00825 Beta-ketoacyl synthase K04M3_RS11460 SM00463 Small MutS-related domain K04M3_RS11465 SM00855 Phosphoglycerate mutase family K04M3_RS11560 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11570 SM00260 Two component signalling adaptor domain K04M3_RS11575 SM00260 Two component signalling adaptor domain K04M3_RS11585 SM00448 cheY-homologous receiver domain K04M3_RS11590 SM00073 Histidine Phosphotransfer domain K04M3_RS11590 SM00260 Two component signalling adaptor domain K04M3_RS11590 SM00387 Histidine kinase-like ATPases K04M3_RS11590 SM01231 K04M3_RS11590 K04M3_RS11600 SM00448 cheY-homologous receiver domain K04M3_RS11615 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11615 SM00962 SRP54-type protein, GTPase domain K04M3_RS11680 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11705 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11705 SM00448 cheY-homologous receiver domain K04M3_RS11710 SM00387 Histidine kinase-like ATPases K04M3_RS11710 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS11715 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11810 SM01130 K04M3_RS11810 K04M3_RS11850 SM00857 Resolvase, N terminal domain K04M3_RS11865 SM00382 ATPases associated with a variety of cellular activities K04M3_RS11940 SM00387 Histidine kinase-like ATPases K04M3_RS11940 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS11940 SM00448 cheY-homologous receiver domain K04M3_RS11950 SM00357 Cold shock protein domain K04M3_RS11970 SM00357 Cold shock protein domain K04M3_RS11980 SM00244 prohibitin homologues K04M3_RS11985 SM00244 prohibitin homologues K04M3_RS12000 SM00357 Cold shock protein domain K04M3_RS12035 SM00028 Tetratricopeptide repeats K04M3_RS12120 SM00479 K04M3_RS12120 K04M3_RS12135 SM00849 Metallo-beta-lactamase superfamily K04M3_RS12140 SM00257 Lysin motif K04M3_RS12155 SM00938 Nitrogen regulatory protein P-II K04M3_RS12165 SM00977 TilS substrate C-terminal domain K04M3_RS12175 SM00481 DNA polymerase alpha chain like domain K04M3_RS12205 SM00935 Outer membrane protein (OmpH-like) K04M3_RS12215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M3_RS12260 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS12320 SM00849 Metallo-beta-lactamase superfamily K04M3_RS12385 SM00495 Chitin-binding domain type 3 K04M3_RS12385 SM00636 K04M3_RS12385 K04M3_RS12400 SM00487 DEAD-like helicases superfamily K04M3_RS12400 SM00490 helicase superfamily c-terminal domain K04M3_RS12495 SM00487 DEAD-like helicases superfamily K04M3_RS12505 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS12590 SM00267 diguanylate cyclase K04M3_RS12590 SM00448 cheY-homologous receiver domain K04M3_RS12620 SM00900 K04M3_RS12620 K04M3_RS12675 SM00464 Found in ATP-dependent protease La (LON) K04M3_RS12705 SM00267 diguanylate cyclase K04M3_RS12720 SM00925 MltA specific insert domain K04M3_RS12865 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M3_RS12865 SM01134 K04M3_RS12865 K04M3_RS12895 SM00354 helix_turn _helix lactose operon repressor K04M3_RS12910 SM00421 helix_turn_helix, Lux Regulon K04M3_RS12955 SM00838 Elongation factor G C-terminus K04M3_RS12955 SM00889 Elongation factor G, domain IV K04M3_RS12960 SM00382 ATPases associated with a variety of cellular activities K04M3_RS12990 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain K04M3_RS12995 SM01133 K04M3_RS12995 K04M3_RS13050 SM00052 Putative diguanylate phosphodiesterase K04M3_RS13050 SM00091 PAS domain K04M3_RS13050 SM00267 diguanylate cyclase K04M3_RS13070 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M3_RS13075 SM00028 Tetratricopeptide repeats K04M3_RS13080 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS13080 SM00322 K homology RNA-binding domain K04M3_RS13085 SM01387 K04M3_RS13085 K04M3_RS13105 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS13145 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13155 SM01103 K04M3_RS13155 K04M3_RS13180 SM00363 S4 RNA-binding domain K04M3_RS13220 SM00091 PAS domain K04M3_RS13220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS13220 SM00387 Histidine kinase-like ATPases K04M3_RS13220 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS13220 SM00448 cheY-homologous receiver domain K04M3_RS13240 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13245 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13265 SM01068 Putative carbohydrate binding domain K04M3_RS13275 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13295 SM00938 Nitrogen regulatory protein P-II K04M3_RS13320 SM00487 DEAD-like helicases superfamily K04M3_RS13320 SM00490 helicase superfamily c-terminal domain K04M3_RS13320 SM00847 Helicase associated domain (HA2) Add an annotation K04M3_RS13375 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13385 SM00947 Carbonic anhydrase K04M3_RS13415 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS13415 SM00895 K04M3_RS13415 K04M3_RS13420 SM00644 K04M3_RS13420 K04M3_RS13485 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13485 SM00962 SRP54-type protein, GTPase domain K04M3_RS13485 SM00963 SRP54-type protein, helical bundle domain K04M3_RS13495 SM01091 Transporter associated domain K04M3_RS13525 SM00829 Enoylreductase K04M3_RS13605 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M3_RS13615 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13625 SM00533 DNA-binding domain of DNA mismatch repair MUTS family K04M3_RS13625 SM00534 ATPase domain of DNA mismatch repair MUTS family K04M3_RS13635 SM00257 Lysin motif K04M3_RS13670 SM01192 K04M3_RS13670 K04M3_RS13670 SM01193 K04M3_RS13670 K04M3_RS13685 SM00954 Region found in RelA / SpoT proteins K04M3_RS13700 SM00073 Histidine Phosphotransfer domain K04M3_RS13700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS13700 SM00387 Histidine kinase-like ATPases K04M3_RS13700 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS13700 SM00448 cheY-homologous receiver domain K04M3_RS13725 SM00358 Double-stranded RNA binding motif K04M3_RS13725 SM00535 Ribonuclease III family K04M3_RS13735 SM00838 Elongation factor G C-terminus K04M3_RS13865 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M3_RS13880 SM00861 Transketolase, pyrimidine binding domain K04M3_RS13900 SM00731 SprT homologues. K04M3_RS13925 SM00732 Likely ribonuclease with RNase H fold. K04M3_RS13935 SM00382 ATPases associated with a variety of cellular activities K04M3_RS13955 SM01152 K04M3_RS13955 K04M3_RS13970 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS13990 SM00478 endonuclease III K04M3_RS13990 SM00525 K04M3_RS13990 K04M3_RS14040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS14040 SM01049 K04M3_RS14040 K04M3_RS14120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS14125 SM00354 helix_turn _helix lactose operon repressor K04M3_RS14155 SM00495 Chitin-binding domain type 3 K04M3_RS14210 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M3_RS14255 SM00563 Phosphate acyltransferases K04M3_RS14290 SM00382 ATPases associated with a variety of cellular activities K04M3_RS14300 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS14315 SM00382 ATPases associated with a variety of cellular activities K04M3_RS14345 SM00924 MgtE intracellular N domain K04M3_RS14375 SM00487 DEAD-like helicases superfamily K04M3_RS14375 SM00490 helicase superfamily c-terminal domain K04M3_RS14380 SM00670 Large family of predicted nucleotide-binding domains K04M3_RS14400 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS14470 SM00382 ATPases associated with a variety of cellular activities K04M3_RS14475 SM00028 Tetratricopeptide repeats K04M3_RS14485 SM00965 Secretin and TonB N terminus short domain K04M3_RS14505 SM00052 Putative diguanylate phosphodiesterase K04M3_RS14505 SM00267 diguanylate cyclase K04M3_RS14515 SM00421 helix_turn_helix, Lux Regulon K04M3_RS14555 SM01018 B12 binding domain K04M3_RS14680 SM01005 Alanine racemase, C-terminal domain K04M3_RS14740 SM00965 Secretin and TonB N terminus short domain K04M3_RS14760 SM00842 Cell division protein FtsA K04M3_RS14810 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M3_RS14850 SM00919 Malic enzyme, NAD binding domain K04M3_RS14850 SM01274 K04M3_RS14850 K04M3_RS14870 SM00838 Elongation factor G C-terminus K04M3_RS14870 SM00889 Elongation factor G, domain IV K04M3_RS14910 SM00320 WD40 repeats K04M3_RS14950 SM00382 ATPases associated with a variety of cellular activities K04M3_RS14975 SM00100 Cyclic nucleotide-monophosphate binding domain K04M3_RS14975 SM00419 helix_turn_helix, cAMP Regulatory protein K04M3_RS14980 SM01150 K04M3_RS14980 K04M3_RS15025 SM00967 RNA 2'-O ribose methyltransferase substrate binding K04M3_RS15030 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS15030 SM00357 Cold shock protein domain K04M3_RS15030 SM00955 K04M3_RS15030 K04M3_RS15045 SM00671 Sel1-like repeats. K04M3_RS15050 SM00788 Adenylosuccinate synthetase K04M3_RS15060 SM00244 prohibitin homologues K04M3_RS15065 SM00244 prohibitin homologues K04M3_RS15085 SM00853 MutL C terminal dimerisation domain K04M3_RS15085 SM01340 K04M3_RS15085 K04M3_RS15090 SM00257 Lysin motif K04M3_RS15090 SM00646 K04M3_RS15090 K04M3_RS15170 SM00479 K04M3_RS15170 K04M3_RS15200 SM00450 Rhodanese Homology Domain K04M3_RS15215 SM00971 Serine acetyltransferase, N-terminal K04M3_RS15270 SM00841 Elongation factor P, C-terminal K04M3_RS15270 SM01185 K04M3_RS15270 K04M3_RS15295 SM00883 Chaperonin 10 Kd subunit K04M3_RS15325 SM00448 cheY-homologous receiver domain K04M3_RS15325 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS15330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS15330 SM00387 Histidine kinase-like ATPases K04M3_RS15330 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS15365 SM00421 helix_turn_helix, Lux Regulon K04M3_RS15365 SM00448 cheY-homologous receiver domain K04M3_RS15370 SM01091 Transporter associated domain K04M3_RS15400 SM00387 Histidine kinase-like ATPases K04M3_RS15400 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS15400 SM00448 cheY-homologous receiver domain K04M3_RS15415 SM00479 K04M3_RS15415 K04M3_RS15435 SM00878 Biotin carboxylase C-terminal domain K04M3_RS15460 SM00382 ATPases associated with a variety of cellular activities K04M3_RS15525 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS15530 SM00422 helix_turn_helix, mercury resistance K04M3_RS15540 SM00798 AICARFT/IMPCHase bienzyme K04M3_RS15540 SM00851 MGS-like domain K04M3_RS15545 SM01209 K04M3_RS15545 K04M3_RS15545 SM01210 K04M3_RS15545 K04M3_RS15555 SM00411 bacterial (prokaryotic) histone like domain K04M3_RS15560 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS15575 SM00986 Uracil DNA glycosylase superfamily K04M3_RS15575 SM00987 UreE urease accessory protein, C-terminal domain K04M3_RS15595 SM00663 RNA polymerase I subunit A N-terminus K04M3_RS15620 SM00649 Ribosomal protein L11/L12 K04M3_RS15625 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K04M3_RS15625 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K04M3_RS15690 SM00155 Phospholipase D. Active site motifs. K04M3_RS15750 SM00360 RNA recognition motif K04M3_RS15815 SM00563 Phosphate acyltransferases K04M3_RS15840 SM00450 Rhodanese Homology Domain K04M3_RS15860 SM00382 ATPases associated with a variety of cellular activities K04M3_RS15865 SM00382 ATPases associated with a variety of cellular activities K04M3_RS15865 SM00962 SRP54-type protein, GTPase domain K04M3_RS15865 SM00963 SRP54-type protein, helical bundle domain K04M3_RS15930 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M3_RS15935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M3_RS15940 SM00052 Putative diguanylate phosphodiesterase K04M3_RS15970 SM01144 K04M3_RS15970 K04M3_RS15975 SM00052 Putative diguanylate phosphodiesterase K04M3_RS15975 SM00897 FIST N domain K04M3_RS15975 SM01204 K04M3_RS15975 K04M3_RS16010 SM01219 K04M3_RS16010 K04M3_RS16035 SM00028 Tetratricopeptide repeats K04M3_RS16090 SM00357 Cold shock protein domain K04M3_RS16090 SM00382 ATPases associated with a variety of cellular activities K04M3_RS16090 SM00959 Rho termination factor, N-terminal domain K04M3_RS16100 SM00487 DEAD-like helicases superfamily K04M3_RS16100 SM00490 helicase superfamily c-terminal domain K04M3_RS16125 SM00341 Helicase and RNase D C-terminal K04M3_RS16125 SM00487 DEAD-like helicases superfamily K04M3_RS16125 SM00490 helicase superfamily c-terminal domain K04M3_RS16125 SM00956 K04M3_RS16125 K04M3_RS16135 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS16195 SM00876 Biotin and Thiamin Synthesis associated domain K04M3_RS16305 SM01001 AIR carboxylase K04M3_RS16330 SM00257 Lysin motif K04M3_RS16400 SM00563 Phosphate acyltransferases K04M3_RS16410 SM00382 ATPases associated with a variety of cellular activities K04M3_RS16450 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS16470 SM00382 ATPases associated with a variety of cellular activities K04M3_RS16510 SM00470 ParB-like nuclease domain K04M3_RS16525 SM01228 K04M3_RS16525 K04M3_RS16545 SM01234 K04M3_RS16545 K04M3_RS16560 SM00382 ATPases associated with a variety of cellular activities K04M3_RS16570 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS16570 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M3_RS16580 SM00470 ParB-like nuclease domain K04M3_RS16650 SM00382 ATPases associated with a variety of cellular activities K04M3_RS16655 SM00052 Putative diguanylate phosphodiesterase K04M3_RS16655 SM00267 diguanylate cyclase K04M3_RS16670 SM00448 cheY-homologous receiver domain K04M3_RS16675 SM00387 Histidine kinase-like ATPases K04M3_RS16685 SM00421 helix_turn_helix, Lux Regulon K04M3_RS16690 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS16715 SM00360 RNA recognition motif K04M3_RS16735 SM00344 helix_turn_helix ASNC type K04M3_RS16745 SM00382 ATPases associated with a variety of cellular activities K04M3_RS16755 SM00487 DEAD-like helicases superfamily K04M3_RS16755 SM00490 helicase superfamily c-terminal domain K04M3_RS16765 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS16770 SM00829 Enoylreductase K04M3_RS16860 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M3_RS16875 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS16875 SM00871 Bacterial transcription activator, effector binding domain K04M3_RS16880 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS16905 SM00382 ATPases associated with a variety of cellular activities K04M3_RS16935 SM00448 cheY-homologous receiver domain K04M3_RS16935 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS16940 SM00387 Histidine kinase-like ATPases K04M3_RS17000 SM00382 ATPases associated with a variety of cellular activities K04M3_RS17005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS17005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS17040 SM00857 Resolvase, N terminal domain K04M3_RS17045 SM00354 helix_turn _helix lactose operon repressor K04M3_RS17085 SM00354 helix_turn _helix lactose operon repressor K04M3_RS17140 SM00642 Alpha-amylase domain K04M3_RS17160 SM00642 Alpha-amylase domain K04M3_RS17170 SM00642 Alpha-amylase domain K04M3_RS17175 SM00671 Sel1-like repeats. K04M3_RS17195 SM00966 SpoVT / AbrB like domain K04M3_RS17235 SM00421 helix_turn_helix, Lux Regulon K04M3_RS17255 SM00642 Alpha-amylase domain K04M3_RS17265 SM00642 Alpha-amylase domain K04M3_RS17330 SM00226 Low molecular weight phosphatase family K04M3_RS17365 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. K04M3_RS17380 SM00450 Rhodanese Homology Domain K04M3_RS17390 SM00936 Penicillin-binding protein 5, C-terminal domain K04M3_RS17395 SM00642 Alpha-amylase domain K04M3_RS17400 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS17510 SM00448 cheY-homologous receiver domain K04M3_RS17510 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS17515 SM00387 Histidine kinase-like ATPases K04M3_RS17515 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS17670 SM00382 ATPases associated with a variety of cellular activities K04M3_RS17695 SM00382 ATPases associated with a variety of cellular activities K04M3_RS17705 SM00020 Trypsin-like serine protease K04M3_RS17725 SM00481 DNA polymerase alpha chain like domain K04M3_RS17770 SM00448 cheY-homologous receiver domain K04M3_RS17770 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS17775 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS17790 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS17795 SM00052 Putative diguanylate phosphodiesterase K04M3_RS17795 SM00267 diguanylate cyclase K04M3_RS17805 SM00829 Enoylreductase K04M3_RS17810 SM00972 Spore Coat Protein U domain K04M3_RS17815 SM00972 Spore Coat Protein U domain K04M3_RS17830 SM00972 Spore Coat Protein U domain K04M3_RS17835 SM01057 Eukaryotic-type carbonic anhydrase K04M3_RS17870 SM00382 ATPases associated with a variety of cellular activities K04M3_RS17885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS17885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS17905 SM00587 ZnF_C4 abd HLH domain containing kinases domain K04M3_RS17940 SM00382 ATPases associated with a variety of cellular activities K04M3_RS17960 SM00267 diguanylate cyclase K04M3_RS17965 SM00028 Tetratricopeptide repeats K04M3_RS17985 SM00422 helix_turn_helix, mercury resistance K04M3_RS17995 SM00257 Lysin motif K04M3_RS18005 SM00487 DEAD-like helicases superfamily K04M3_RS18005 SM00490 helicase superfamily c-terminal domain K04M3_RS18035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS18035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS18055 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18060 SM00267 diguanylate cyclase K04M3_RS18070 SM00327 von Willebrand factor (vWF) type A domain K04M3_RS18075 SM00327 von Willebrand factor (vWF) type A domain K04M3_RS18095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS18095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS18105 SM00421 helix_turn_helix, Lux Regulon K04M3_RS18110 SM00421 helix_turn_helix, Lux Regulon K04M3_RS18120 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18145 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18155 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18160 SM00387 Histidine kinase-like ATPases K04M3_RS18160 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS18165 SM00448 cheY-homologous receiver domain K04M3_RS18165 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS18230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M3_RS18230 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18235 SM00849 Metallo-beta-lactamase superfamily K04M3_RS18255 SM01060 K04M3_RS18255 K04M3_RS18265 SM00829 Enoylreductase K04M3_RS18275 SM01022 K04M3_RS18275 K04M3_RS18335 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18370 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS18450 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18480 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M3_RS18500 SM00260 Two component signalling adaptor domain K04M3_RS18500 SM00448 cheY-homologous receiver domain K04M3_RS18515 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18520 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18535 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M3_RS18535 SM01134 K04M3_RS18535 K04M3_RS18550 SM01007 Class II Aldolase and Adducin N-terminal domain K04M3_RS18580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS18580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS18615 SM00422 helix_turn_helix, mercury resistance K04M3_RS18620 SM00642 Alpha-amylase domain K04M3_RS18625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M3_RS18650 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M3_RS18695 SM00267 diguanylate cyclase K04M3_RS18730 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M3_RS18745 SM00382 ATPases associated with a variety of cellular activities K04M3_RS18760 SM01119 K04M3_RS18760 K04M3_RS18815 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS18825 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M3_RS18875 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS18895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS18895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS18925 SM00052 Putative diguanylate phosphodiesterase K04M3_RS18925 SM00267 diguanylate cyclase K04M3_RS18985 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS19075 SM01322 K04M3_RS19075 K04M3_RS19080 SM00357 Cold shock protein domain K04M3_RS19090 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS19090 SM00267 diguanylate cyclase K04M3_RS19105 SM00382 ATPases associated with a variety of cellular activities K04M3_RS19110 SM00382 ATPases associated with a variety of cellular activities K04M3_RS19120 SM00448 cheY-homologous receiver domain K04M3_RS19145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS19145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS19245 SM00487 DEAD-like helicases superfamily K04M3_RS19245 SM00490 helicase superfamily c-terminal domain K04M3_RS19270 SM00357 Cold shock protein domain K04M3_RS19290 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M3_RS19295 SM00487 DEAD-like helicases superfamily K04M3_RS19295 SM00490 helicase superfamily c-terminal domain K04M3_RS19315 SM00052 Putative diguanylate phosphodiesterase K04M3_RS19320 SM00382 ATPases associated with a variety of cellular activities K04M3_RS19325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS19350 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS19355 SM00316 Ribosomal protein S1-like RNA-binding domain K04M3_RS19355 SM00357 Cold shock protein domain K04M3_RS19355 SM00955 K04M3_RS19355 K04M3_RS19360 SM00487 DEAD-like helicases superfamily K04M3_RS19360 SM00490 helicase superfamily c-terminal domain K04M3_RS19455 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M3_RS19460 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M3_RS19485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M3_RS19485 SM00091 PAS domain K04M3_RS19485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS19515 SM00422 helix_turn_helix, mercury resistance K04M3_RS19550 SM00822 K04M3_RS19550 K04M3_RS19635 SM00382 ATPases associated with a variety of cellular activities K04M3_RS19640 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS19640 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M3_RS19685 SM00893 Electron transfer flavoprotein domain K04M3_RS19695 SM00861 Transketolase, pyrimidine binding domain K04M3_RS19745 SM00448 cheY-homologous receiver domain K04M3_RS19745 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS19750 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS19755 SM00871 Bacterial transcription activator, effector binding domain K04M3_RS19775 SM00028 Tetratricopeptide repeats K04M3_RS19775 SM00267 diguanylate cyclase K04M3_RS19795 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M3_RS19815 SM01012 K04M3_RS19815 K04M3_RS19835 SM00382 ATPases associated with a variety of cellular activities K04M3_RS19870 SM00331 Sigma factor PP2C-like phosphatases K04M3_RS19870 SM00448 cheY-homologous receiver domain K04M3_RS19890 SM00220 Serine/Threonine protein kinases, catalytic domain K04M3_RS19895 SM00240 Forkhead associated domain K04M3_RS19925 SM00331 Sigma factor PP2C-like phosphatases K04M3_RS19925 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain K04M3_RS19970 SM00382 ATPases associated with a variety of cellular activities K04M3_RS19970 SM01086 C-terminal, D2-small domain, of ClpB protein K04M3_RS20040 SM00382 ATPases associated with a variety of cellular activities K04M3_RS20080 SM01005 Alanine racemase, C-terminal domain K04M3_RS20085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS20085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS20090 SM01311 K04M3_RS20090 K04M3_RS20110 SM00493 K04M3_RS20110 K04M3_RS20110 SM00778 Zinc-binding domain of primase-helicase K04M3_RS20115 SM00482 DNA polymerase A domain K04M3_RS20335 SM00642 Alpha-amylase domain K04M3_RS20350 SM00880 K04M3_RS20350 K04M3_RS20370 SM00267 diguanylate cyclase K04M3_RS20380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M3_RS20380 SM00267 diguanylate cyclase K04M3_RS20500 SM00387 Histidine kinase-like ATPases K04M3_RS20505 SM00421 helix_turn_helix, Lux Regulon K04M3_RS20505 SM00448 cheY-homologous receiver domain K04M3_RS20555 SM00450 Rhodanese Homology Domain K04M3_RS20560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M3_RS20595 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS20635 SM00382 ATPases associated with a variety of cellular activities K04M3_RS20645 SM00267 diguanylate cyclase K04M3_RS20645 SM00448 cheY-homologous receiver domain K04M3_RS20650 SM00267 diguanylate cyclase K04M3_RS20665 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M3_RS20665 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M3_RS20675 SM00387 Histidine kinase-like ATPases K04M3_RS20675 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS20680 SM00448 cheY-homologous receiver domain K04M3_RS20680 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS20730 SM00369 Leucine-rich repeats, typical (most populated) subfamily K04M3_RS21165 SM00881 CoA binding domain K04M3_RS21185 SM00091 PAS domain K04M3_RS21185 SM00267 diguanylate cyclase K04M3_RS21185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS21195 SM00796 Allophanate hydrolase subunit 1 K04M3_RS21200 SM00797 Allophanate hydrolase subunit 2 K04M3_RS21215 SM00382 ATPases associated with a variety of cellular activities K04M3_RS21230 SM00052 Putative diguanylate phosphodiesterase K04M3_RS21230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M3_RS21230 SM00267 diguanylate cyclase K04M3_RS21240 SM00271 DnaJ molecular chaperone homology domain K04M3_RS21305 SM00782 PhnA Zinc-Ribbon K04M3_RS21340 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M3_RS21345 SM00867 YceI-like domain K04M3_RS21365 SM00052 Putative diguanylate phosphodiesterase K04M3_RS21370 SM00487 DEAD-like helicases superfamily K04M3_RS21370 SM00490 helicase superfamily c-terminal domain K04M3_RS21385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS21425 SM00495 Chitin-binding domain type 3 K04M3_RS21425 SM00636 K04M3_RS21425 K04M3_RS21435 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS21450 SM00382 ATPases associated with a variety of cellular activities K04M3_RS21460 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS21460 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M3_RS21470 SM00052 Putative diguanylate phosphodiesterase K04M3_RS21485 SM00354 helix_turn _helix lactose operon repressor K04M3_RS21535 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS21560 SM00849 Metallo-beta-lactamase superfamily K04M3_RS21580 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS21605 SM00479 K04M3_RS21605 K04M3_RS21610 SM00382 ATPases associated with a variety of cellular activities K04M3_RS21640 SM00422 helix_turn_helix, mercury resistance K04M3_RS21680 SM00924 MgtE intracellular N domain K04M3_RS21720 SM00953 K04M3_RS21720 K04M3_RS21735 SM00704 CDGSH-type zinc finger. Function unknown. K04M3_RS21800 SM00260 Two component signalling adaptor domain K04M3_RS21800 SM00448 cheY-homologous receiver domain K04M3_RS21810 SM00421 helix_turn_helix, Lux Regulon K04M3_RS21810 SM00448 cheY-homologous receiver domain K04M3_RS21820 SM00267 diguanylate cyclase K04M3_RS21825 SM00421 helix_turn_helix, Lux Regulon K04M3_RS21825 SM00448 cheY-homologous receiver domain K04M3_RS21830 SM00052 Putative diguanylate phosphodiesterase K04M3_RS21830 SM00448 cheY-homologous receiver domain K04M3_RS21835 SM00062 Bacterial periplasmic substrate-binding proteins K04M3_RS21835 SM00387 Histidine kinase-like ATPases K04M3_RS21835 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS21835 SM00448 cheY-homologous receiver domain K04M3_RS21850 SM00387 Histidine kinase-like ATPases K04M3_RS21850 SM00448 cheY-homologous receiver domain K04M3_RS21885 SM00990 K04M3_RS21885 K04M3_RS21905 SM00046 Diacylglycerol kinase catalytic domain (presumed) K04M3_RS21925 SM00327 von Willebrand factor (vWF) type A domain K04M3_RS21930 SM00327 von Willebrand factor (vWF) type A domain K04M3_RS21970 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS21985 SM00073 Histidine Phosphotransfer domain K04M3_RS21985 SM00387 Histidine kinase-like ATPases K04M3_RS21985 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS21985 SM00448 cheY-homologous receiver domain K04M3_RS21995 SM00851 MGS-like domain K04M3_RS22045 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS22050 SM00422 helix_turn_helix, mercury resistance K04M3_RS22055 SM00382 ATPases associated with a variety of cellular activities K04M3_RS22095 SM00354 helix_turn _helix lactose operon repressor K04M3_RS22115 SM00382 ATPases associated with a variety of cellular activities K04M3_RS22125 SM00052 Putative diguanylate phosphodiesterase K04M3_RS22125 SM00267 diguanylate cyclase K04M3_RS22180 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K04M3_RS22190 SM00387 Histidine kinase-like ATPases K04M3_RS22190 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS22190 SM00448 cheY-homologous receiver domain K04M3_RS22205 SM00244 prohibitin homologues K04M3_RS22220 SM00382 ATPases associated with a variety of cellular activities K04M3_RS22250 SM00028 Tetratricopeptide repeats K04M3_RS22250 SM00267 diguanylate cyclase K04M3_RS22255 SM00822 K04M3_RS22255 K04M3_RS22290 SM00422 helix_turn_helix, mercury resistance K04M3_RS22310 SM00878 Biotin carboxylase C-terminal domain K04M3_RS22330 SM01266 K04M3_RS22330 K04M3_RS22335 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS22400 SM00382 ATPases associated with a variety of cellular activities K04M3_RS22425 SM00382 ATPases associated with a variety of cellular activities K04M3_RS22440 SM00893 Electron transfer flavoprotein domain K04M3_RS22445 SM00893 Electron transfer flavoprotein domain K04M3_RS22465 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS22465 SM00866 K04M3_RS22465 K04M3_RS22510 SM00822 K04M3_RS22510 K04M3_RS22520 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS22570 SM00240 Forkhead associated domain K04M3_RS22590 SM00344 helix_turn_helix ASNC type K04M3_RS22625 SM00220 Serine/Threonine protein kinases, catalytic domain K04M3_RS22660 SM00382 ATPases associated with a variety of cellular activities K04M3_RS22660 SM01086 C-terminal, D2-small domain, of ClpB protein K04M3_RS22665 SM00382 ATPases associated with a variety of cellular activities K04M3_RS22705 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS22715 SM00736 Dystroglycan-type cadherin-like domains. K04M3_RS22735 SM00028 Tetratricopeptide repeats K04M3_RS22735 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS22760 SM01240 K04M3_RS22760 K04M3_RS22775 SM00448 cheY-homologous receiver domain K04M3_RS22810 SM00852 Probable molybdopterin binding domain K04M3_RS22830 SM00450 Rhodanese Homology Domain K04M3_RS22855 SM00861 Transketolase, pyrimidine binding domain K04M3_RS22860 SM00091 PAS domain K04M3_RS22860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS22895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS22930 SM00421 helix_turn_helix, Lux Regulon K04M3_RS22930 SM00448 cheY-homologous receiver domain K04M3_RS22935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS22935 SM00387 Histidine kinase-like ATPases K04M3_RS22950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M3_RS22985 SM00822 K04M3_RS22985 K04M3_RS23035 SM00344 helix_turn_helix ASNC type K04M3_RS23060 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M3_RS23065 SM00387 Histidine kinase-like ATPases K04M3_RS23065 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS23065 SM00448 cheY-homologous receiver domain K04M3_RS23080 SM00465 GIY-YIG type nucleases (URI domain) K04M3_RS23105 SM00387 Histidine kinase-like ATPases K04M3_RS23105 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS23105 SM00448 cheY-homologous receiver domain K04M3_RS23110 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M3_RS23135 SM00344 helix_turn_helix ASNC type K04M3_RS23145 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS23155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS23155 SM00387 Histidine kinase-like ATPases K04M3_RS23155 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS23160 SM00448 cheY-homologous receiver domain K04M3_RS23160 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS23175 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS23195 SM00924 MgtE intracellular N domain K04M3_RS23210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M3_RS23215 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS23220 SM00563 Phosphate acyltransferases K04M3_RS23265 SM00448 cheY-homologous receiver domain K04M3_RS23265 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS23270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS23270 SM00387 Histidine kinase-like ATPases K04M3_RS23270 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS23315 SM00357 Cold shock protein domain K04M3_RS23345 SM00936 Penicillin-binding protein 5, C-terminal domain K04M3_RS23365 SM00640 Glycosyl hydrolases family 32 K04M3_RS23380 SM00354 helix_turn _helix lactose operon repressor K04M3_RS23395 SM00822 K04M3_RS23395 K04M3_RS23435 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS23435 SM00871 Bacterial transcription activator, effector binding domain K04M3_RS23465 SM00487 DEAD-like helicases superfamily K04M3_RS23465 SM00490 helicase superfamily c-terminal domain K04M3_RS23495 SM00829 Enoylreductase K04M3_RS23510 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS23515 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS23530 SM00344 helix_turn_helix ASNC type K04M3_RS23565 SM00788 Adenylosuccinate synthetase K04M3_RS23570 SM00870 K04M3_RS23570 K04M3_RS23590 SM00421 helix_turn_helix, Lux Regulon K04M3_RS23625 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS23625 SM00866 K04M3_RS23625 K04M3_RS23650 SM00382 ATPases associated with a variety of cellular activities K04M3_RS23700 SM00155 Phospholipase D. Active site motifs. K04M3_RS23710 SM01022 K04M3_RS23710 K04M3_RS23715 SM00028 Tetratricopeptide repeats K04M3_RS23725 SM00422 helix_turn_helix, mercury resistance K04M3_RS23750 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K04M3_RS23760 SM00838 Elongation factor G C-terminus K04M3_RS23760 SM00889 Elongation factor G, domain IV K04M3_RS23795 SM00382 ATPases associated with a variety of cellular activities K04M3_RS23870 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M3_RS23870 SM01134 K04M3_RS23870 K04M3_RS23900 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS23940 SM00883 Chaperonin 10 Kd subunit K04M3_RS23950 SM00450 Rhodanese Homology Domain K04M3_RS23965 SM01240 K04M3_RS23965 K04M3_RS24040 SM00858 K04M3_RS24040 K04M3_RS24105 SM00631 K04M3_RS24105 K04M3_RS24135 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS24135 SM00866 K04M3_RS24135 K04M3_RS24145 SM00382 ATPases associated with a variety of cellular activities K04M3_RS24175 SM00354 helix_turn _helix lactose operon repressor K04M3_RS24225 SM00382 ATPases associated with a variety of cellular activities K04M3_RS24240 SM01057 Eukaryotic-type carbonic anhydrase K04M3_RS24300 SM01266 K04M3_RS24300 K04M3_RS24335 SM00267 diguanylate cyclase K04M3_RS24345 SM00530 Helix-turn-helix XRE-family like proteins K04M3_RS24350 SM00267 diguanylate cyclase K04M3_RS24350 SM01079 K04M3_RS24350 K04M3_RS24445 SM00267 diguanylate cyclase K04M3_RS24450 SM00382 ATPases associated with a variety of cellular activities K04M3_RS24450 SM00448 cheY-homologous receiver domain K04M3_RS24455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M3_RS24455 SM00387 Histidine kinase-like ATPases K04M3_RS24515 SM00849 Metallo-beta-lactamase superfamily K04M3_RS24555 SM00382 ATPases associated with a variety of cellular activities K04M3_RS24625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS24625 SM00387 Histidine kinase-like ATPases K04M3_RS24625 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS24630 SM00448 cheY-homologous receiver domain K04M3_RS24630 SM00862 Transcriptional regulatory protein, C terminal K04M3_RS24725 SM00382 ATPases associated with a variety of cellular activities K04M3_RS24755 SM00014 Acid phosphatase homologues K04M3_RS24775 SM00822 K04M3_RS24775 K04M3_RS24810 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS24905 SM00495 Chitin-binding domain type 3 K04M3_RS24910 SM00344 helix_turn_helix ASNC type K04M3_RS24935 SM00829 Enoylreductase K04M3_RS24950 SM00267 diguanylate cyclase K04M3_RS24970 SM00849 Metallo-beta-lactamase superfamily K04M3_RS24990 SM00267 diguanylate cyclase K04M3_RS25010 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K04M3_RS25010 SM00495 Chitin-binding domain type 3 K04M3_RS25010 SM00636 K04M3_RS25010 K04M3_RS25055 SM00342 helix_turn_helix, arabinose operon control protein K04M3_RS25055 SM01009 AlkA N-terminal domain K04M3_RS25105 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M3_RS25110 SM00382 ATPases associated with a variety of cellular activities K04M3_RS25140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M3_RS25140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M3_RS25140 SM01049 K04M3_RS25140 K04M3_RS25155 SM00448 cheY-homologous receiver domain K04M3_RS25155 SM00850 LytTr DNA-binding domain K04M3_RS25160 SM00387 Histidine kinase-like ATPases K04M3_RS25180 SM00382 ATPases associated with a variety of cellular activities K04M3_RS25205 SM00387 Histidine kinase-like ATPases K04M3_RS25205 SM00388 His Kinase A (phosphoacceptor) domain K04M3_RS25205 SM00448 cheY-homologous receiver domain K04M3_RS25225 SM00382 ATPases associated with a variety of cellular activities K04M3_RS25230 SM00382 ATPases associated with a variety of cellular activities K04M3_RS25675 SM00400 zinc finger K04M3_RS25785 SM00400 zinc finger K04M3_RS25930 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M3_RS25930 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M3_RS25930 SM00493 K04M3_RS25930 K04M3_RS26035 SM00382 ATPases associated with a variety of cellular activities K04M3_RS26170 SM00528 Domain in histone-like proteins of HNS family K04M3_RS26185 SM00477 DNA/RNA non-specific endonuclease K04M3_RS26185 SM00892 DNA/RNA non-specific endonuclease K04M3_RS26210 SM00052 Putative diguanylate phosphodiesterase K04M3_RS26210 SM00267 diguanylate cyclase K04M3_RS26385 SM00974 K04M3_RS26385 K04M3_RS26440 SM00244 prohibitin homologues K04M3_RS26445 SM00244 prohibitin homologues K04M3_RS26490 SM00052 Putative diguanylate phosphodiesterase K04M3_RS26490 SM00267 diguanylate cyclase K04M3_RS26600 SM00493 K04M3_RS26600 K04M3_RS26640 SM00479 K04M3_RS26640