locus-tag class description K08M3_RS00005 PF00308 Bacterial dnaA protein K08M3_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix K08M3_RS00005 PF11638 DnaA N-terminal domain K08M3_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain K08M3_RS00010 PF02767 DNA polymerase III beta subunit, central domain K08M3_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain K08M3_RS00015 PF02463 RecF/RecN/SMC N terminal domain K08M3_RS00020 PF18053 DNA gyrase B subunit insert domain K08M3_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS00020 PF01751 Toprim domain K08M3_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus K08M3_RS00020 PF00204 DNA gyrase B K08M3_RS00035 PF00011 Hsp20/alpha crystallin family K08M3_RS00040 PF00155 Aminotransferase class I and II K08M3_RS00045 PF00128 Alpha amylase, catalytic domain K08M3_RS00050 PF05746 DALR anticodon binding domain K08M3_RS00050 PF02092 Glycyl-tRNA synthetase beta subunit K08M3_RS00055 PF02091 Glycyl-tRNA synthetase alpha subunit K08M3_RS00060 PF01169 Uncharacterized protein family UPF0016 K08M3_RS00070 PF01206 Sulfurtransferase TusA K08M3_RS00080 PF03466 LysR substrate binding domain K08M3_RS00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS00085 PF00107 Zinc-binding dehydrogenase K08M3_RS00085 PF08240 Alcohol dehydrogenase GroES-like domain K08M3_RS00090 PF02803 Thiolase, C-terminal domain K08M3_RS00090 PF00108 Thiolase, N-terminal domain K08M3_RS00095 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS00095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K08M3_RS00095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K08M3_RS00100 PF09186 Domain of unknown function (DUF1949) K08M3_RS00100 PF01205 Uncharacterized protein family UPF0029 K08M3_RS00105 PF02386 Cation transport protein K08M3_RS00110 PF12724 Flavodoxin domain K08M3_RS00145 PF03466 LysR substrate binding domain K08M3_RS00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS00150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain K08M3_RS00150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain K08M3_RS00155 PF04380 Membrane fusogenic activity K08M3_RS00165 PF00873 AcrB/AcrD/AcrF family K08M3_RS00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS00175 PF16295 Tetracyclin repressor-like, C-terminal domain K08M3_RS00175 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS00180 PF00580 UvrD/REP helicase N-terminal domain K08M3_RS00180 PF13361 UvrD-like helicase C-terminal domain K08M3_RS00185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M3_RS00215 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS00225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS00225 PF00005 ABC transporter K08M3_RS00230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS00235 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS00240 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M3_RS00240 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS00250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M3_RS00250 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS00255 PF03466 LysR substrate binding domain K08M3_RS00255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS00260 PF00893 Small Multidrug Resistance protein K08M3_RS00265 PF00893 Small Multidrug Resistance protein K08M3_RS00270 PF00920 Dehydratase family K08M3_RS00275 PF01202 Shikimate kinase K08M3_RS00280 PF02447 GntP family permease K08M3_RS00285 PF01081 KDPG and KHG aldolase K08M3_RS00290 PF01048 Phosphorylase superfamily K08M3_RS00295 PF03466 LysR substrate binding domain K08M3_RS00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS00300 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS00300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M3_RS00305 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ K08M3_RS00310 PF01432 Peptidase family M3 K08M3_RS00315 PF01037 Lrp/AsnC ligand binding domain K08M3_RS00320 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS00320 PF00563 EAL domain K08M3_RS00320 PF08448 PAS fold K08M3_RS00325 PF04445 Putative SAM-dependent methyltransferase K08M3_RS00335 PF00892 EamA-like transporter family K08M3_RS00340 PF00582 Universal stress protein family K08M3_RS00345 PF00210 Ferritin-like domain K08M3_RS00350 PF10625 Universal stress protein B (UspB) K08M3_RS00360 PF01590 GAF domain K08M3_RS00360 PF02954 Bacterial regulatory protein, Fis family K08M3_RS00360 PF00158 Sigma-54 interaction domain K08M3_RS00385 PF00781 Diacylglycerol kinase catalytic domain K08M3_RS00415 PF01594 AI-2E family transporter K08M3_RS00420 PF00563 EAL domain K08M3_RS00420 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS00420 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS00430 PF02646 RmuC family K08M3_RS00435 PF01209 ubiE/COQ5 methyltransferase family K08M3_RS00440 PF02036 SCP-2 sterol transfer family K08M3_RS00445 PF03109 ABC1 family K08M3_RS00450 PF02416 mttA/Hcf106 family K08M3_RS00455 PF02416 mttA/Hcf106 family K08M3_RS00460 PF00902 Sec-independent protein translocase protein (TatC) K08M3_RS00470 PF01026 TatD related DNase K08M3_RS00480 PF00490 Delta-aminolevulinic acid dehydratase K08M3_RS00485 PF00583 Acetyltransferase (GNAT) family K08M3_RS00495 PF00476 DNA polymerase family A K08M3_RS00495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K08M3_RS00495 PF01612 3'-5' exonuclease K08M3_RS00495 PF01367 5'-3' exonuclease, C-terminal SAM fold K08M3_RS00500 PF01926 50S ribosome-binding GTPase K08M3_RS00505 PF00034 Cytochrome c K08M3_RS00520 PF04220 Der GTPase activator (YihI) K08M3_RS00525 PF10675 Protein of unknown function (DUF2489) K08M3_RS00530 PF06969 HemN C-terminal domain K08M3_RS00530 PF04055 Radical SAM superfamily K08M3_RS00535 PF00962 Adenosine/AMP deaminase K08M3_RS00540 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS00540 PF00563 EAL domain K08M3_RS00540 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS00545 PF00072 Response regulator receiver domain K08M3_RS00545 PF00158 Sigma-54 interaction domain K08M3_RS00545 PF02954 Bacterial regulatory protein, Fis family K08M3_RS00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS00550 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS00550 PF00989 PAS fold K08M3_RS00560 PF00120 Glutamine synthetase, catalytic domain K08M3_RS00560 PF03951 Glutamine synthetase, beta-Grasp domain K08M3_RS00565 PF00679 Elongation factor G C-terminus K08M3_RS00565 PF00009 Elongation factor Tu GTP binding domain K08M3_RS00565 PF03144 Elongation factor Tu domain 2 K08M3_RS00570 PF08299 Bacterial dnaA protein helix-turn-helix K08M3_RS00570 PF00308 Bacterial dnaA protein K08M3_RS00580 PF03631 Virulence factor BrkB K08M3_RS00585 PF02580 D-Tyr-tRNA(Tyr) deacylase K08M3_RS00590 PF00583 Acetyltransferase (GNAT) family K08M3_RS00590 PF09500 Putative thioesterase (yiiD_Cterm) K08M3_RS00600 PF01293 Phosphoenolpyruvate carboxykinase K08M3_RS00605 PF01430 Hsp33 protein K08M3_RS00610 PF01479 S4 domain K08M3_RS00615 PF11356 Type II secretion system protein C K08M3_RS00620 PF00263 Bacterial type II and III secretion system protein K08M3_RS00620 PF03958 Bacterial type II/III secretion system short domain K08M3_RS00625 PF00437 Type II/IV secretion system protein K08M3_RS00630 PF00482 Type II secretion system (T2SS), protein F K08M3_RS00635 PF08334 Type II secretion system (T2SS), protein G K08M3_RS00635 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS00640 PF12019 Type II transport protein GspH K08M3_RS00645 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS00645 PF02501 Type II secretion system (T2SS), protein I K08M3_RS00650 PF11612 Type II secretion system (T2SS), protein J K08M3_RS00650 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS00655 PF03934 Type II secretion system (T2SS), protein K K08M3_RS00660 PF12693 GspL periplasmic domain K08M3_RS00660 PF05134 Type II secretion system (T2SS), protein L K08M3_RS00665 PF04612 Type II secretion system (T2SS), protein M K08M3_RS00670 PF01203 Type II secretion system (T2SS), protein N K08M3_RS00675 PF00459 Inositol monophosphatase family K08M3_RS00680 PF00293 NUDIX domain K08M3_RS00685 PF01521 Iron-sulphur cluster biosynthesis K08M3_RS00685 PF01106 NifU-like domain K08M3_RS00690 PF00156 Phosphoribosyl transferase domain K08M3_RS00695 PF00561 alpha/beta hydrolase fold K08M3_RS00705 PF17674 HHH domain K08M3_RS00705 PF00575 S1 RNA binding domain K08M3_RS00705 PF09371 Tex-like protein N-terminal domain K08M3_RS00705 PF16921 Tex protein YqgF-like domain K08M3_RS00715 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M3_RS00715 PF03449 Transcription elongation factor, N-terminal K08M3_RS00725 PF00072 Response regulator receiver domain K08M3_RS00725 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS00730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS00730 PF00672 HAMP domain K08M3_RS00730 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS00735 PF00860 Permease family K08M3_RS00740 PF00271 Helicase conserved C-terminal domain K08M3_RS00740 PF17191 RecG wedge domain K08M3_RS00740 PF00270 DEAD/DEAH box helicase K08M3_RS00745 PF00588 SpoU rRNA Methylase family K08M3_RS00745 PF12105 SpoU, rRNA methylase, C-terminal K08M3_RS00750 PF13291 ACT domain K08M3_RS00750 PF02824 TGS domain K08M3_RS00750 PF04607 Region found in RelA / SpoT proteins K08M3_RS00755 PF01192 RNA polymerase Rpb6 K08M3_RS00760 PF00625 Guanylate kinase K08M3_RS00775 PF02472 Biopolymer transport protein ExbD/TolR K08M3_RS00780 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS00795 PF00593 TonB dependent receptor K08M3_RS00795 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS00805 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS00810 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M3_RS00815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS00820 PF00005 ABC transporter K08M3_RS00820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS00825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS00825 PF00005 ABC transporter K08M3_RS00835 PF03755 YicC-like family, N-terminal region K08M3_RS00835 PF08340 Domain of unknown function (DUF1732) K08M3_RS00845 PF01138 3' exoribonuclease family, domain 1 K08M3_RS00845 PF03725 3' exoribonuclease family, domain 2 K08M3_RS00850 PF00156 Phosphoribosyl transferase domain K08M3_RS00855 PF03279 Bacterial lipid A biosynthesis acyltransferase K08M3_RS00860 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS00865 PF04127 DNA / pantothenate metabolism flavoprotein K08M3_RS00865 PF02441 Flavoprotein K08M3_RS00870 PF00672 HAMP domain K08M3_RS00870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS00870 PF17200 Single Cache domain 2 K08M3_RS00875 PF04002 RadC-like JAB domain K08M3_RS00880 PF00830 Ribosomal L28 family K08M3_RS00885 PF00471 Ribosomal protein L33 K08M3_RS00895 PF06827 Zinc finger found in FPG and IleRS K08M3_RS00895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain K08M3_RS00895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain K08M3_RS00900 PF01467 Cytidylyltransferase-like K08M3_RS00905 PF05686 Glycosyl transferase family 90 K08M3_RS00910 PF00535 Glycosyl transferase family 2 K08M3_RS00915 PF00535 Glycosyl transferase family 2 K08M3_RS00920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K08M3_RS00925 PF01219 Prokaryotic diacylglycerol kinase K08M3_RS00935 PF16363 GDP-mannose 4,6 dehydratase K08M3_RS00940 PF00483 Nucleotidyl transferase K08M3_RS00945 PF05523 WxcM-like, C-terminal K08M3_RS00955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K08M3_RS00980 PF00682 HMGL-like K08M3_RS00980 PF07836 DmpG-like communication domain K08M3_RS00985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K08M3_RS00990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K08M3_RS01000 PF03279 Bacterial lipid A biosynthesis acyltransferase K08M3_RS01015 PF01370 NAD dependent epimerase/dehydratase family K08M3_RS01020 PF06082 Exopolysaccharide biosynthesis protein YbjH K08M3_RS01045 PF18412 Outer-membrane lipoprotein Wza C-terminal domain K08M3_RS01045 PF02563 Polysaccharide biosynthesis/export protein K08M3_RS01045 PF10531 SLBB domain K08M3_RS01070 PF00534 Glycosyl transferases group 1 K08M3_RS01070 PF13439 Glycosyltransferase Family 4 K08M3_RS01080 PF00534 Glycosyl transferases group 1 K08M3_RS01080 PF13439 Glycosyltransferase Family 4 K08M3_RS01085 PF13439 Glycosyltransferase Family 4 K08M3_RS01085 PF00534 Glycosyl transferases group 1 K08M3_RS01090 PF02397 Bacterial sugar transferase K08M3_RS01095 PF00753 Metallo-beta-lactamase superfamily K08M3_RS01095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain K08M3_RS01095 PF10996 Beta-Casp domain K08M3_RS01100 PF00953 Glycosyl transferase family 4 K08M3_RS01125 PF00535 Glycosyl transferase family 2 K08M3_RS01130 PF00535 Glycosyl transferase family 2 K08M3_RS01140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain K08M3_RS01140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain K08M3_RS01140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain K08M3_RS01145 PF01370 NAD dependent epimerase/dehydratase family K08M3_RS01150 PF00483 Nucleotidyl transferase K08M3_RS01155 PF00121 Triosephosphate isomerase K08M3_RS01180 PF00455 DeoR C terminal sensor domain K08M3_RS01180 PF08220 DeoR-like helix-turn-helix domain K08M3_RS01185 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K08M3_RS01190 PF06005 Cell division protein ZapB K08M3_RS01195 PF03737 Aldolase/RraA K08M3_RS01200 PF01040 UbiA prenyltransferase family K08M3_RS01230 PF04002 RadC-like JAB domain K08M3_RS01245 PF00072 Response regulator receiver domain K08M3_RS01245 PF12431 Transcriptional regulator K08M3_RS01250 PF17203 Single cache domain 3 K08M3_RS01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS01255 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit K08M3_RS01260 PF00364 Biotin-requiring enzyme K08M3_RS01260 PF00682 HMGL-like K08M3_RS01260 PF02436 Conserved carboxylase domain K08M3_RS01265 PF04277 Oxaloacetate decarboxylase, gamma chain K08M3_RS01270 PF03390 2-hydroxycarboxylate transporter family K08M3_RS01275 PF08218 Citrate lyase ligase C-terminal domain K08M3_RS01280 PF06857 Malonate decarboxylase delta subunit (MdcD) K08M3_RS01285 PF03328 HpcH/HpaI aldolase/citrate lyase family K08M3_RS01290 PF04223 Citrate lyase, alpha subunit (CitF) K08M3_RS01295 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K08M3_RS01300 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase K08M3_RS01315 PF07724 AAA domain (Cdc48 subfamily) K08M3_RS01315 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS01320 PF00227 Proteasome subunit K08M3_RS01330 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS01335 PF18074 Primosomal protein N C-terminal domain K08M3_RS01335 PF18319 PriA DNA helicase Cys-rich region (CRR) domain K08M3_RS01335 PF00270 DEAD/DEAH box helicase K08M3_RS01335 PF17764 3′ DNA-binding domain (3′BD) K08M3_RS01335 PF00271 Helicase conserved C-terminal domain K08M3_RS01345 PF01197 Ribosomal protein L31 K08M3_RS01350 PF00338 Ribosomal protein S10p/S20e K08M3_RS01355 PF00297 Ribosomal protein L3 K08M3_RS01360 PF00573 Ribosomal protein L4/L1 family K08M3_RS01365 PF00276 Ribosomal protein L23 K08M3_RS01370 PF00181 Ribosomal Proteins L2, RNA binding domain K08M3_RS01370 PF03947 Ribosomal Proteins L2, C-terminal domain K08M3_RS01375 PF00203 Ribosomal protein S19 K08M3_RS01380 PF00237 Ribosomal protein L22p/L17e K08M3_RS01385 PF07650 KH domain K08M3_RS01385 PF00189 Ribosomal protein S3, C-terminal domain K08M3_RS01390 PF00252 Ribosomal protein L16p/L10e K08M3_RS01395 PF00831 Ribosomal L29 protein K08M3_RS01400 PF00366 Ribosomal protein S17 K08M3_RS01405 PF00238 Ribosomal protein L14p/L23e K08M3_RS01410 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 K08M3_RS01410 PF00467 KOW motif K08M3_RS01415 PF00673 ribosomal L5P family C-terminus K08M3_RS01415 PF00281 Ribosomal protein L5 K08M3_RS01420 PF00253 Ribosomal protein S14p/S29e K08M3_RS01425 PF00410 Ribosomal protein S8 K08M3_RS01430 PF00347 Ribosomal protein L6 K08M3_RS01435 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K08M3_RS01440 PF00333 Ribosomal protein S5, N-terminal domain K08M3_RS01440 PF03719 Ribosomal protein S5, C-terminal domain K08M3_RS01445 PF00327 Ribosomal protein L30p/L7e K08M3_RS01450 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K08M3_RS01455 PF00344 SecY translocase K08M3_RS01460 PF00444 Ribosomal protein L36 K08M3_RS01465 PF00416 Ribosomal protein S13/S18 K08M3_RS01470 PF00411 Ribosomal protein S11 K08M3_RS01475 PF00163 Ribosomal protein S4/S9 N-terminal domain K08M3_RS01475 PF01479 S4 domain K08M3_RS01480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain K08M3_RS01480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain K08M3_RS01480 PF01000 RNA polymerase Rpb3/RpoA insert domain K08M3_RS01485 PF01196 Ribosomal protein L17 K08M3_RS01495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M3_RS01495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M3_RS01505 PF13673 Acetyltransferase (GNAT) domain K08M3_RS01510 PF00270 DEAD/DEAH box helicase K08M3_RS01510 PF00271 Helicase conserved C-terminal domain K08M3_RS01510 PF03880 DbpA RNA binding domain K08M3_RS01520 PF02872 5'-nucleotidase, C-terminal domain K08M3_RS01520 PF00149 Calcineurin-like phosphoesterase K08M3_RS01525 PF10414 Sirohaem synthase dimerisation region K08M3_RS01525 PF14824 Sirohaem biosynthesis protein central K08M3_RS01525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M3_RS01530 PF01507 Phosphoadenosine phosphosulfate reductase family K08M3_RS01535 PF00009 Elongation factor Tu GTP binding domain K08M3_RS01540 PF03600 Citrate transporter K08M3_RS01540 PF02080 TrkA-C domain K08M3_RS01565 PF00005 ABC transporter K08M3_RS01575 PF10795 Protein of unknown function (DUF2607) K08M3_RS01580 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) K08M3_RS01585 PF06526 Protein of unknown function (DUF1107) K08M3_RS01590 PF01625 Peptide methionine sulfoxide reductase K08M3_RS01595 PF17243 POTRA domain TamA domain 1 K08M3_RS01595 PF01103 Surface antigen K08M3_RS01600 PF04357 TamB, inner membrane protein subunit of TAM complex K08M3_RS01605 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like K08M3_RS01615 PF00719 Inorganic pyrophosphatase K08M3_RS01620 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain K08M3_RS01625 PF08245 Mur ligase middle domain K08M3_RS01625 PF02875 Mur ligase family, glutamate ligase domain K08M3_RS01625 PF01225 Mur ligase family, catalytic domain K08M3_RS01630 PF02441 Flavoprotein K08M3_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS01645 PF00005 ABC transporter K08M3_RS01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS01650 PF03466 LysR substrate binding domain K08M3_RS01655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M3_RS01675 PF16868 NMT1-like family K08M3_RS01685 PF01316 Arginine repressor, DNA binding domain K08M3_RS01685 PF02863 Arginine repressor, C-terminal domain K08M3_RS01690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K08M3_RS01690 PF00056 lactate/malate dehydrogenase, NAD binding domain K08M3_RS01700 PF00348 Polyprenyl synthetase K08M3_RS01705 PF00829 Ribosomal prokaryotic L21 protein K08M3_RS01710 PF01016 Ribosomal L27 protein K08M3_RS01715 PF01926 50S ribosome-binding GTPase K08M3_RS01715 PF01018 GTP1/OBG K08M3_RS01720 PF06738 Putative threonine/serine exporter K08M3_RS01725 PF12821 Threonine/Serine exporter, ThrE K08M3_RS01730 PF00186 Dihydrofolate reductase K08M3_RS01735 PF00149 Calcineurin-like phosphoesterase K08M3_RS01740 PF04379 ApaG domain K08M3_RS01745 PF00398 Ribosomal RNA adenine dimethylase K08M3_RS01750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA K08M3_RS01755 PF09312 SurA N-terminal domain K08M3_RS01760 PF04453 LPS transport system D K08M3_RS01760 PF03968 OstA-like protein K08M3_RS01765 PF00226 DnaJ domain K08M3_RS01765 PF05099 Tellurite resistance protein TerB K08M3_RS01775 PF00694 Aconitase C-terminal domain K08M3_RS01780 PF00330 Aconitase family (aconitate hydratase) K08M3_RS01785 PF00180 Isocitrate/isopropylmalate dehydrogenase K08M3_RS01790 PF00682 HMGL-like K08M3_RS01790 PF08502 LeuA allosteric (dimerisation) domain K08M3_RS01805 PF01569 PAP2 superfamily K08M3_RS01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS01815 PF03466 LysR substrate binding domain K08M3_RS01820 PF00501 AMP-binding enzyme K08M3_RS01825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M3_RS01825 PF00205 Thiamine pyrophosphate enzyme, central domain K08M3_RS01825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M3_RS01830 PF10369 Small subunit of acetolactate synthase K08M3_RS01835 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS01845 PF02887 Pyruvate kinase, alpha/beta domain K08M3_RS01845 PF00224 Pyruvate kinase, barrel domain K08M3_RS01850 PF00455 DeoR C terminal sensor domain K08M3_RS01850 PF08220 DeoR-like helix-turn-helix domain K08M3_RS01855 PF01380 SIS domain K08M3_RS01860 PF00465 Iron-containing alcohol dehydrogenase K08M3_RS01865 PF02733 Dak1 domain K08M3_RS01870 PF02734 DAK2 domain K08M3_RS01875 PF05524 PEP-utilising enzyme, N-terminal K08M3_RS01875 PF00391 PEP-utilising enzyme, mobile domain K08M3_RS01875 PF02896 PEP-utilising enzyme, TIM barrel domain K08M3_RS01880 PF00158 Sigma-54 interaction domain K08M3_RS01880 PF02954 Bacterial regulatory protein, Fis family K08M3_RS01880 PF00989 PAS fold K08M3_RS01885 PF05068 Mannitol repressor K08M3_RS01890 PF01232 Mannitol dehydrogenase Rossmann domain K08M3_RS01890 PF08125 Mannitol dehydrogenase C-terminal domain K08M3_RS01895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M3_RS01895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M3_RS01895 PF02378 Phosphotransferase system, EIIC K08M3_RS01915 PF03180 NLPA lipoprotein K08M3_RS01925 PF04546 Sigma-70, non-essential region K08M3_RS01925 PF04539 Sigma-70 region 3 K08M3_RS01925 PF04542 Sigma-70 region 2 K08M3_RS01925 PF00140 Sigma-70 factor, region 1.2 K08M3_RS01925 PF04545 Sigma-70, region 4 K08M3_RS01925 PF03979 Sigma-70 factor, region 1.1 K08M3_RS01930 PF01807 CHC2 zinc finger K08M3_RS01930 PF08275 DNA primase catalytic core, N-terminal domain K08M3_RS01930 PF08278 DNA primase DnaG DnaB-binding K08M3_RS01930 PF10410 DnaB-helicase binding domain of primase K08M3_RS01935 PF09424 Yqey-like protein K08M3_RS01940 PF01165 Ribosomal protein S21 K08M3_RS01945 PF00814 Glycoprotease family K08M3_RS01950 PF00561 alpha/beta hydrolase fold K08M3_RS01955 PF02660 Glycerol-3-phosphate acyltransferase K08M3_RS01960 PF02152 Dihydroneopterin aldolase K08M3_RS01965 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M3_RS01970 PF02673 Bacitracin resistance protein BacA K08M3_RS01975 PF01966 HD domain K08M3_RS01975 PF01743 Poly A polymerase head domain K08M3_RS01975 PF12627 Probable RNA and SrmB- binding site of polymerase A K08M3_RS01980 PF01471 Putative peptidoglycan binding domain K08M3_RS01980 PF13401 AAA domain K08M3_RS01995 PF08239 Bacterial SH3 domain K08M3_RS02000 PF01384 Phosphate transporter family K08M3_RS02005 PF01865 Protein of unknown function DUF47 K08M3_RS02010 PF01928 CYTH domain K08M3_RS02020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS02020 PF00672 HAMP domain K08M3_RS02020 PF02743 Cache domain K08M3_RS02025 PF03710 Glutamate-ammonia ligase adenylyltransferase K08M3_RS02025 PF08335 GlnD PII-uridylyltransferase K08M3_RS02030 PF00294 pfkB family carbohydrate kinase K08M3_RS02030 PF01467 Cytidylyltransferase-like K08M3_RS02035 PF02321 Outer membrane efflux protein K08M3_RS02040 PF00293 NUDIX domain K08M3_RS02045 PF06853 Protein of unknown function (DUF1249) K08M3_RS02050 PF00149 Calcineurin-like phosphoesterase K08M3_RS02055 PF05728 Uncharacterised protein family (UPF0227) K08M3_RS02060 PF01751 Toprim domain K08M3_RS02060 PF00986 DNA gyrase B subunit, carboxyl terminus K08M3_RS02060 PF00204 DNA gyrase B K08M3_RS02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS02065 PF00521 DNA gyrase/topoisomerase IV, subunit A K08M3_RS02065 PF03989 DNA gyrase C-terminal domain, beta-propeller K08M3_RS02070 PF13180 PDZ domain K08M3_RS02075 PF00595 PDZ domain K08M3_RS02080 PF06295 Protein of unknown function (DUF1043) K08M3_RS02085 PF03969 AFG1-like ATPase K08M3_RS02095 PF00572 Ribosomal protein L13 K08M3_RS02100 PF00380 Ribosomal protein S9/S16 K08M3_RS02105 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K08M3_RS02105 PF00355 Rieske [2Fe-2S] domain K08M3_RS02110 PF00033 Cytochrome b/b6/petB K08M3_RS02110 PF00032 Cytochrome b(C-terminal)/b6/petD K08M3_RS02115 PF02167 Cytochrome C1 family K08M3_RS02120 PF00043 Glutathione S-transferase, C-terminal domain K08M3_RS02120 PF02798 Glutathione S-transferase, N-terminal domain K08M3_RS02125 PF04386 Stringent starvation protein B K08M3_RS02135 PF04972 BON domain K08M3_RS02140 PF13580 SIS domain K08M3_RS02145 PF02021 Uncharacterised protein family UPF0102 K08M3_RS02150 PF04348 LppC putative lipoprotein K08M3_RS02155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M3_RS02170 PF01795 MraW methylase family K08M3_RS02175 PF04999 Cell division protein FtsL K08M3_RS02180 PF00905 Penicillin binding protein transpeptidase domain K08M3_RS02180 PF03717 Penicillin-binding Protein dimerisation domain K08M3_RS02185 PF01225 Mur ligase family, catalytic domain K08M3_RS02185 PF08245 Mur ligase middle domain K08M3_RS02185 PF02875 Mur ligase family, glutamate ligase domain K08M3_RS02190 PF01225 Mur ligase family, catalytic domain K08M3_RS02190 PF08245 Mur ligase middle domain K08M3_RS02190 PF02875 Mur ligase family, glutamate ligase domain K08M3_RS02195 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K08M3_RS02195 PF00953 Glycosyl transferase family 4 K08M3_RS02200 PF08245 Mur ligase middle domain K08M3_RS02200 PF02875 Mur ligase family, glutamate ligase domain K08M3_RS02205 PF01098 Cell cycle protein K08M3_RS02210 PF04101 Glycosyltransferase family 28 C-terminal domain K08M3_RS02210 PF03033 Glycosyltransferase family 28 N-terminal domain K08M3_RS02215 PF08245 Mur ligase middle domain K08M3_RS02215 PF02875 Mur ligase family, glutamate ligase domain K08M3_RS02215 PF01225 Mur ligase family, catalytic domain K08M3_RS02220 PF03799 Cell division protein FtsQ K08M3_RS02220 PF08478 POTRA domain, FtsQ-type K08M3_RS02225 PF02491 SHS2 domain inserted in FTSA K08M3_RS02230 PF00091 Tubulin/FtsZ family, GTPase domain K08M3_RS02230 PF12327 FtsZ family, C-terminal domain K08M3_RS02235 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase K08M3_RS02245 PF02810 SEC-C motif K08M3_RS02245 PF07516 SecA Wing and Scaffold domain K08M3_RS02245 PF07517 SecA DEAD-like domain K08M3_RS02245 PF01043 SecA preprotein cross-linking domain K08M3_RS02250 PF00293 NUDIX domain K08M3_RS02255 PF01113 Dihydrodipicolinate reductase, N-terminus K08M3_RS02255 PF05173 Dihydrodipicolinate reductase, C-terminus K08M3_RS02260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K08M3_RS02260 PF00117 Glutamine amidotransferase class-I K08M3_RS02265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K08M3_RS02265 PF02142 MGS-like domain K08M3_RS02265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K08M3_RS02280 PF01925 Sulfite exporter TauE/SafE K08M3_RS02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS02285 PF03466 LysR substrate binding domain K08M3_RS02290 PF03458 UPF0126 domain K08M3_RS02295 PF01497 Periplasmic binding protein K08M3_RS02300 PF17113 Regulatory signalling modulator protein AmpE K08M3_RS02300 PF03186 CobD/Cbib protein K08M3_RS02305 PF01048 Phosphorylase superfamily K08M3_RS02315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K08M3_RS02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS02320 PF01493 GXGXG motif K08M3_RS02320 PF01645 Conserved region in glutamate synthase K08M3_RS02320 PF04898 Glutamate synthase central domain K08M3_RS02320 PF00310 Glutamine amidotransferases class-II K08M3_RS02325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K08M3_RS02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS02330 PF00310 Glutamine amidotransferases class-II K08M3_RS02330 PF04898 Glutamate synthase central domain K08M3_RS02330 PF01645 Conserved region in glutamate synthase K08M3_RS02330 PF01493 GXGXG motif K08M3_RS02335 PF04055 Radical SAM superfamily K08M3_RS02335 PF16199 Radical_SAM C-terminal domain K08M3_RS02340 PF00563 EAL domain K08M3_RS02340 PF01590 GAF domain K08M3_RS02340 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS02340 PF00360 Phytochrome region K08M3_RS02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS02345 PF00989 PAS fold K08M3_RS02345 PF01627 Hpt domain K08M3_RS02345 PF18415 Histidine kinase receptor ArcB trans-membrane domain K08M3_RS02345 PF00072 Response regulator receiver domain K08M3_RS02345 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS02355 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS02355 PF00072 Response regulator receiver domain K08M3_RS02370 PF03737 Aldolase/RraA K08M3_RS02385 PF00696 Amino acid kinase family K08M3_RS02385 PF13840 ACT domain K08M3_RS02385 PF01842 ACT domain K08M3_RS02385 PF00742 Homoserine dehydrogenase K08M3_RS02385 PF03447 Homoserine dehydrogenase, NAD binding domain K08M3_RS02390 PF08544 GHMP kinases C terminal K08M3_RS02390 PF00288 GHMP kinases N terminal domain K08M3_RS02395 PF00291 Pyridoxal-phosphate dependent enzyme K08M3_RS02395 PF14821 Threonine synthase N terminus K08M3_RS02405 PF01228 Glycine radical K08M3_RS02410 PF01261 Xylose isomerase-like TIM barrel K08M3_RS02420 PF03167 Uracil DNA glycosylase superfamily K08M3_RS02435 PF01235 Sodium:alanine symporter family K08M3_RS02440 PF03883 Peroxide stress protein YaaA K08M3_RS02445 PF00270 DEAD/DEAH box helicase K08M3_RS02445 PF00271 Helicase conserved C-terminal domain K08M3_RS02450 PF05175 Methyltransferase small domain K08M3_RS02455 PF05525 Branched-chain amino acid transport protein K08M3_RS02460 PF00258 Flavodoxin K08M3_RS02465 PF02899 Phage integrase, N-terminal SAM-like domain K08M3_RS02465 PF00589 Phage integrase family K08M3_RS02470 PF13098 Thioredoxin-like domain K08M3_RS02470 PF10411 Disulfide bond isomerase protein N-terminus K08M3_RS02475 PF02272 DHHA1 domain K08M3_RS02475 PF01368 DHH family K08M3_RS02475 PF17768 RecJ OB domain K08M3_RS02485 PF01336 OB-fold nucleic acid binding domain K08M3_RS02485 PF00152 tRNA synthetases class II (D, K and N) K08M3_RS02490 PF00072 Response regulator receiver domain K08M3_RS02490 PF00158 Sigma-54 interaction domain K08M3_RS02490 PF02954 Bacterial regulatory protein, Fis family K08M3_RS02500 PF00248 Aldo/keto reductase family K08M3_RS02510 PF02976 DNA mismatch repair enzyme MutH K08M3_RS02515 PF00293 NUDIX domain K08M3_RS02520 PF00391 PEP-utilising enzyme, mobile domain K08M3_RS02520 PF05524 PEP-utilising enzyme, N-terminal K08M3_RS02520 PF01590 GAF domain K08M3_RS02520 PF02896 PEP-utilising enzyme, TIM barrel domain K08M3_RS02525 PF01925 Sulfite exporter TauE/SafE K08M3_RS02530 PF01790 Prolipoprotein diacylglyceryl transferase K08M3_RS02535 PF00303 Thymidylate synthase K08M3_RS02545 PF02690 Na+/Pi-cotransporter K08M3_RS02550 PF03466 LysR substrate binding domain K08M3_RS02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS02555 PF01022 Bacterial regulatory protein, arsR family K08M3_RS02560 PF01649 Ribosomal protein S20 K08M3_RS02565 PF03023 Lipid II flippase MurJ K08M3_RS02570 PF01687 Riboflavin kinase K08M3_RS02570 PF06574 FAD synthetase K08M3_RS02575 PF00133 tRNA synthetases class I (I, L, M and V) K08M3_RS02575 PF06827 Zinc finger found in FPG and IleRS K08M3_RS02575 PF08264 Anticodon-binding domain of tRNA K08M3_RS02580 PF01252 Signal peptidase (SPase) II K08M3_RS02585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M3_RS02590 PF02401 LytB protein K08M3_RS02600 PF04397 LytTr DNA-binding domain K08M3_RS02600 PF00072 Response regulator receiver domain K08M3_RS02605 PF06580 Histidine kinase K08M3_RS02605 PF07694 5TMR of 5TMR-LYT K08M3_RS02610 PF02554 Carbon starvation protein CstA K08M3_RS02625 PF01380 SIS domain K08M3_RS02630 PF03702 Anhydro-N-acetylmuramic acid kinase K08M3_RS02635 PF00933 Glycosyl hydrolase family 3 N terminal domain K08M3_RS02640 PF00793 DAHP synthetase I family K08M3_RS02645 PF01817 Chorismate mutase type II K08M3_RS02645 PF02153 Prephenate dehydrogenase K08M3_RS02650 PF01551 Peptidase family M23 K08M3_RS02650 PF04225 Opacity-associated protein A LysM-like domain K08M3_RS02655 PF07238 PilZ domain K08M3_RS02660 PF12848 ABC transporter K08M3_RS02660 PF00005 ABC transporter K08M3_RS02665 PF01464 Transglycosylase SLT domain K08M3_RS02665 PF14718 Soluble lytic murein transglycosylase L domain K08M3_RS02670 PF01371 Trp repressor protein K08M3_RS02675 PF01931 Protein of unknown function DUF84 K08M3_RS02680 PF01817 Chorismate mutase type II K08M3_RS02680 PF00800 Prephenate dehydratase K08M3_RS02685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K08M3_RS02690 PF01464 Transglycosylase SLT domain K08M3_RS02690 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS02695 PF13525 Outer membrane lipoprotein K08M3_RS02700 PF01479 S4 domain K08M3_RS02700 PF00849 RNA pseudouridylate synthase K08M3_RS02705 PF02578 Multi-copper polyphenol oxidoreductase laccase K08M3_RS02710 PF10431 C-terminal, D2-small domain, of ClpB protein K08M3_RS02710 PF07724 AAA domain (Cdc48 subfamily) K08M3_RS02710 PF17871 AAA lid domain K08M3_RS02710 PF02861 Clp amino terminal domain, pathogenicity island component K08M3_RS02710 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS02760 PF03411 Penicillin-insensitive murein endopeptidase K08M3_RS02775 PF00037 4Fe-4S binding domain K08M3_RS02780 PF01136 Peptidase family U32 K08M3_RS02780 PF16325 Peptidase family U32 C-terminal domain K08M3_RS02785 PF04381 Putative exonuclease, RdgC K08M3_RS02795 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS02795 PF00072 Response regulator receiver domain K08M3_RS02800 PF00989 PAS fold K08M3_RS02800 PF11808 Phosphate regulon sensor protein PhoR K08M3_RS02800 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS02805 PF12849 PBP superfamily domain K08M3_RS02810 PF02541 Ppx/GppA phosphatase family K08M3_RS02815 PF17941 Polyphosphate kinase C-terminal domain 1 K08M3_RS02815 PF13090 Polyphosphate kinase C-terminal domain 2 K08M3_RS02815 PF02503 Polyphosphate kinase middle domain K08M3_RS02815 PF13089 Polyphosphate kinase N-terminal domain K08M3_RS02820 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS02825 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS02830 PF00005 ABC transporter K08M3_RS02835 PF01895 PhoU domain K08M3_RS02840 PF03976 Polyphosphate kinase 2 (PPK2) K08M3_RS02845 PF03932 CutC family K08M3_RS02850 PF00578 AhpC/TSA family K08M3_RS02850 PF10417 C-terminal domain of 1-Cys peroxiredoxin K08M3_RS02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS02855 PF03466 LysR substrate binding domain K08M3_RS02860 PF01274 Malate synthase K08M3_RS02865 PF00463 Isocitrate lyase family K08M3_RS02870 PF00571 CBS domain K08M3_RS02880 PF02547 Queuosine biosynthesis protein K08M3_RS02885 PF01702 Queuine tRNA-ribosyltransferase K08M3_RS02890 PF02699 Preprotein translocase subunit K08M3_RS02895 PF07549 SecD/SecF GG Motif K08M3_RS02895 PF13721 SecD export protein N-terminal TM region K08M3_RS02895 PF02355 Protein export membrane protein K08M3_RS02900 PF02355 Protein export membrane protein K08M3_RS02900 PF07549 SecD/SecF GG Motif K08M3_RS02915 PF00459 Inositol monophosphatase family K08M3_RS02920 PF00588 SpoU rRNA Methylase family K08M3_RS02925 PF02082 Transcriptional regulator K08M3_RS02930 PF00266 Aminotransferase class-V K08M3_RS02935 PF01592 NifU-like N terminal domain K08M3_RS02940 PF01521 Iron-sulphur cluster biosynthesis K08M3_RS02945 PF00226 DnaJ domain K08M3_RS02945 PF07743 HSCB C-terminal oligomerisation domain K08M3_RS02950 PF00012 Hsp70 protein K08M3_RS02955 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M3_RS02960 PF04384 Iron-sulphur cluster assembly K08M3_RS02965 PF12404 Peptidase K08M3_RS02965 PF00883 Cytosol aminopeptidase family, catalytic domain K08M3_RS02970 PF00334 Nucleoside diphosphate kinase K08M3_RS02975 PF04055 Radical SAM superfamily K08M3_RS02980 PF13464 Domain of unknown function (DUF4115) K08M3_RS02985 PF04551 GcpE protein K08M3_RS02990 PF13393 Histidyl-tRNA synthetase K08M3_RS02990 PF03129 Anticodon binding domain K08M3_RS02995 PF09976 Tetratricopeptide repeat-like domain K08M3_RS03000 PF13360 PQQ-like domain K08M3_RS03005 PF01926 50S ribosome-binding GTPase K08M3_RS03005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K08M3_RS03020 PF13742 OB-fold nucleic acid binding domain K08M3_RS03020 PF02601 Exonuclease VII, large subunit K08M3_RS03025 PF00571 CBS domain K08M3_RS03025 PF00478 IMP dehydrogenase / GMP reductase domain K08M3_RS03030 PF00958 GMP synthase C terminal domain K08M3_RS03030 PF00117 Glutamine amidotransferase class-I K08M3_RS03030 PF02540 NAD synthase K08M3_RS03035 PF13356 Arm DNA-binding domain K08M3_RS03035 PF00589 Phage integrase family K08M3_RS03100 PF03553 Na+/H+ antiporter family K08M3_RS03105 PF06483 Chitinase C K08M3_RS03105 PF00704 Glycosyl hydrolases family 18 K08M3_RS03110 PF01184 GPR1/FUN34/yaaH family K08M3_RS03115 PF01235 Sodium:alanine symporter family K08M3_RS03120 PF01266 FAD dependent oxidoreductase K08M3_RS03130 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M3_RS03135 PF00202 Aminotransferase class-III K08M3_RS03155 PF00795 Carbon-nitrogen hydrolase K08M3_RS03155 PF00583 Acetyltransferase (GNAT) family K08M3_RS03160 PF03466 LysR substrate binding domain K08M3_RS03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS03185 PF01668 SmpB protein K08M3_RS03190 PF03364 Polyketide cyclase / dehydrase and lipid transport K08M3_RS03195 PF03658 RnfH family Ubiquitin K08M3_RS03200 PF04355 SmpA / OmlA family K08M3_RS03210 PF02463 RecF/RecN/SMC N terminal domain K08M3_RS03220 PF01513 ATP-NAD kinase K08M3_RS03225 PF01025 GrpE K08M3_RS03230 PF00375 Sodium:dicarboxylate symporter family K08M3_RS03235 PF00012 Hsp70 protein K08M3_RS03240 PF00226 DnaJ domain K08M3_RS03240 PF01556 DnaJ C terminal domain K08M3_RS03240 PF00684 DnaJ central domain K08M3_RS03245 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS03245 PF00114 Pilin (bacterial filament) K08M3_RS03275 PF03806 AbgT putative transporter family K08M3_RS03280 PF14437 MafB19-like deaminase K08M3_RS03290 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS03290 PF01464 Transglycosylase SLT domain K08M3_RS03295 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain K08M3_RS03295 PF02769 AIR synthase related protein, C-terminal domain K08M3_RS03295 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal K08M3_RS03310 PF00593 TonB dependent receptor K08M3_RS03310 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS03325 PF07687 Peptidase dimerisation domain K08M3_RS03325 PF01546 Peptidase family M20/M25/M40 K08M3_RS03330 PF00860 Permease family K08M3_RS03335 PF00156 Phosphoribosyl transferase domain K08M3_RS03340 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) K08M3_RS03345 PF07417 Sigma factor-binding transcriptional regulator Crl K08M3_RS03350 PF00696 Amino acid kinase family K08M3_RS03350 PF01472 PUA domain K08M3_RS03355 PF00171 Aldehyde dehydrogenase family K08M3_RS03360 PF03477 ATP cone domain K08M3_RS03365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M3_RS03365 PF01872 RibD C-terminal domain K08M3_RS03370 PF00677 Lumazine binding domain K08M3_RS03375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K08M3_RS03375 PF00925 GTP cyclohydrolase II K08M3_RS03380 PF00885 6,7-dimethyl-8-ribityllumazine synthase K08M3_RS03385 PF01029 NusB family K08M3_RS03390 PF00586 AIR synthase related protein, N-terminal domain K08M3_RS03390 PF02769 AIR synthase related protein, C-terminal domain K08M3_RS03395 PF04608 Phosphatidylglycerophosphatase A K08M3_RS03400 PF02780 Transketolase, C-terminal domain K08M3_RS03400 PF02779 Transketolase, pyrimidine binding domain K08M3_RS03400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase K08M3_RS03405 PF00348 Polyprenyl synthetase K08M3_RS03410 PF02609 Exonuclease VII small subunit K08M3_RS03415 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS03420 PF13677 Membrane MotB of proton-channel complex MotA/MotB K08M3_RS03420 PF00691 OmpA family K08M3_RS03425 PF02568 Thiamine biosynthesis protein (ThiI) K08M3_RS03425 PF02926 THUMP domain K08M3_RS03430 PF03466 LysR substrate binding domain K08M3_RS03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS03440 PF04241 Protein of unknown function (DUF423) K08M3_RS03445 PF01728 FtsJ-like methyltransferase K08M3_RS03445 PF18125 RlmM ferredoxin-like domain K08M3_RS03450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K08M3_RS03450 PF01367 5'-3' exonuclease, C-terminal SAM fold K08M3_RS03455 PF03641 Possible lysine decarboxylase K08M3_RS03455 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases K08M3_RS03455 PF11892 Domain of unknown function (DUF3412) K08M3_RS03460 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS03470 PF14489 QueF-like protein K08M3_RS03470 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term K08M3_RS03475 PF07348 Syd protein (SUKH-2) K08M3_RS03480 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) K08M3_RS03485 PF03180 NLPA lipoprotein K08M3_RS03490 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS03495 PF09383 NIL domain K08M3_RS03495 PF00005 ABC transporter K08M3_RS03505 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS03510 PF00367 phosphotransferase system, EIIB K08M3_RS03510 PF02378 Phosphotransferase system, EIIC K08M3_RS03515 PF16657 Maltogenic Amylase, C-terminal domain K08M3_RS03515 PF00128 Alpha amylase, catalytic domain K08M3_RS03530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K08M3_RS03530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) K08M3_RS03535 PF00464 Serine hydroxymethyltransferase K08M3_RS03540 PF04055 Radical SAM superfamily K08M3_RS03540 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family K08M3_RS03545 PF03099 Biotin/lipoate A/B protein ligase family K08M3_RS03550 PF04359 Protein of unknown function (DUF493) K08M3_RS03555 PF00768 D-alanyl-D-alanine carboxypeptidase K08M3_RS03555 PF07943 Penicillin-binding protein 5, C-terminal domain K08M3_RS03560 PF05036 Sporulation related domain K08M3_RS03560 PF03330 Lytic transglycolase K08M3_RS03565 PF01098 Cell cycle protein K08M3_RS03570 PF00905 Penicillin binding protein transpeptidase domain K08M3_RS03570 PF03717 Penicillin-binding Protein dimerisation domain K08M3_RS03575 PF02590 Predicted SPOUT methyltransferase K08M3_RS03585 PF06144 DNA polymerase III, delta subunit K08M3_RS03585 PF14840 Processivity clamp loader gamma complex DNA pol III C-term K08M3_RS03590 PF04390 Lipopolysaccharide-assembly K08M3_RS03595 PF08264 Anticodon-binding domain of tRNA K08M3_RS03595 PF13603 Leucyl-tRNA synthetase, Domain 2 K08M3_RS03595 PF00133 tRNA synthetases class I (I, L, M and V) K08M3_RS03600 PF07295 Zinc-ribbon containing domain K08M3_RS03605 PF00795 Carbon-nitrogen hydrolase K08M3_RS03610 PF00571 CBS domain K08M3_RS03610 PF03471 Transporter associated domain K08M3_RS03615 PF02130 Uncharacterized protein family UPF0054 K08M3_RS03620 PF02562 PhoH-like protein K08M3_RS03625 PF04055 Radical SAM superfamily K08M3_RS03625 PF01938 TRAM domain K08M3_RS03625 PF00919 Uncharacterized protein family UPF0004 K08M3_RS03630 PF01494 FAD binding domain K08M3_RS03740 PF01926 50S ribosome-binding GTPase K08M3_RS03740 PF06071 Protein of unknown function (DUF933) K08M3_RS03745 PF01195 Peptidyl-tRNA hydrolase K08M3_RS03750 PF14572 Phosphoribosyl synthetase-associated domain K08M3_RS03750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K08M3_RS03755 PF00288 GHMP kinases N terminal domain K08M3_RS03755 PF08544 GHMP kinases C terminal K08M3_RS03760 PF03550 Outer membrane lipoprotein LolB K08M3_RS03765 PF01488 Shikimate / quinate 5-dehydrogenase K08M3_RS03765 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain K08M3_RS03765 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain K08M3_RS03770 PF00472 RF-1 domain K08M3_RS03770 PF03462 PCRF domain K08M3_RS03775 PF13847 Methyltransferase domain K08M3_RS03775 PF17827 PrmC N-terminal domain K08M3_RS03780 PF04247 Invasion gene expression up-regulator, SirB K08M3_RS03785 PF13369 Transglutaminase-like superfamily K08M3_RS03790 PF00793 DAHP synthetase I family K08M3_RS03795 PF00149 Calcineurin-like phosphoesterase K08M3_RS03795 PF02872 5'-nucleotidase, C-terminal domain K08M3_RS03800 PF04073 Aminoacyl-tRNA editing domain K08M3_RS03805 PF01479 S4 domain K08M3_RS03805 PF00849 RNA pseudouridylate synthase K08M3_RS03810 PF01713 Smr domain K08M3_RS03835 PF02838 Glycosyl hydrolase family 20, domain 2 K08M3_RS03835 PF00728 Glycosyl hydrolase family 20, catalytic domain K08M3_RS03835 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain K08M3_RS03835 PF03173 Putative carbohydrate binding domain K08M3_RS03850 PF00403 Heavy-metal-associated domain K08M3_RS03860 PF13609 Gram-negative porin K08M3_RS03865 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K08M3_RS03870 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M3_RS03875 PF00691 OmpA family K08M3_RS03875 PF01389 OmpA-like transmembrane domain K08M3_RS03920 PF00072 Response regulator receiver domain K08M3_RS03920 PF01584 CheW-like domain K08M3_RS03925 PF03705 CheR methyltransferase, all-alpha domain K08M3_RS03925 PF01739 CheR methyltransferase, SAM binding domain K08M3_RS03930 PF00460 Flagella basal body rod protein K08M3_RS03935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS03935 PF00460 Flagella basal body rod protein K08M3_RS03940 PF13860 FlgD Ig-like domain K08M3_RS03940 PF03963 Flagellar hook capping protein - N-terminal region K08M3_RS03940 PF13861 FlgD Tudor-like domain K08M3_RS03945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS03945 PF07559 Flagellar basal body protein FlaE K08M3_RS03945 PF00460 Flagella basal body rod protein K08M3_RS03950 PF00460 Flagella basal body rod protein K08M3_RS03950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS03955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS03955 PF00460 Flagella basal body rod protein K08M3_RS03960 PF02107 Flagellar L-ring protein K08M3_RS03965 PF02119 Flagellar P-ring protein K08M3_RS03970 PF10135 Rod binding protein K08M3_RS03970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K08M3_RS03975 PF07196 Flagellin hook IN motif K08M3_RS03975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS03980 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS03985 PF00700 Bacterial flagellin C-terminal helical region K08M3_RS03985 PF07196 Flagellin hook IN motif K08M3_RS03985 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS03995 PF00700 Bacterial flagellin C-terminal helical region K08M3_RS03995 PF07196 Flagellin hook IN motif K08M3_RS03995 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS04000 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS04000 PF07196 Flagellin hook IN motif K08M3_RS04000 PF00700 Bacterial flagellin C-terminal helical region K08M3_RS04005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K08M3_RS04010 PF05524 PEP-utilising enzyme, N-terminal K08M3_RS04010 PF00391 PEP-utilising enzyme, mobile domain K08M3_RS04010 PF02896 PEP-utilising enzyme, TIM barrel domain K08M3_RS04015 PF00381 PTS HPr component phosphorylation site K08M3_RS04025 PF00291 Pyridoxal-phosphate dependent enzyme K08M3_RS04035 PF04354 ZipA, C-terminal FtsZ-binding domain K08M3_RS04040 PF12826 Helix-hairpin-helix motif K08M3_RS04040 PF00533 BRCA1 C Terminus (BRCT) domain K08M3_RS04040 PF01653 NAD-dependent DNA ligase adenylation domain K08M3_RS04040 PF03120 NAD-dependent DNA ligase OB-fold domain K08M3_RS04040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K08M3_RS04045 PF03573 outer membrane porin, OprD family K08M3_RS04060 PF16200 C-terminal region of band_7 K08M3_RS04060 PF01145 SPFH domain / Band 7 family K08M3_RS04065 PF11658 Cellulose biosynthesis protein BcsG K08M3_RS04070 PF10995 Cellulose biosynthesis GIL K08M3_RS04080 PF06564 Cellulose biosynthesis protein BcsQ K08M3_RS04085 PF00535 Glycosyl transferase family 2 K08M3_RS04085 PF07238 PilZ domain K08M3_RS04085 PF03552 Cellulose synthase K08M3_RS04090 PF03170 Bacterial cellulose synthase subunit K08M3_RS04095 PF01270 Glycosyl hydrolases family 8 K08M3_RS04100 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) K08M3_RS04105 PF00085 Thioredoxin K08M3_RS04110 PF00106 short chain dehydrogenase K08M3_RS04115 PF01370 NAD dependent epimerase/dehydratase family K08M3_RS04115 PF08338 Domain of unknown function (DUF1731) K08M3_RS04120 PF07556 Protein of unknown function (DUF1538) K08M3_RS04125 PF07556 Protein of unknown function (DUF1538) K08M3_RS04145 PF12850 Calcineurin-like phosphoesterase superfamily domain K08M3_RS04160 PF17323 Trans-membrane regulatory protein ToxS K08M3_RS04165 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS04170 PF00183 Hsp90 protein K08M3_RS04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS04175 PF05191 Adenylate kinase, active site lid K08M3_RS04180 PF00762 Ferrochelatase K08M3_RS04185 PF00854 POT family K08M3_RS04190 PF02357 Transcription termination factor nusG K08M3_RS04195 PF13537 Glutamine amidotransferase domain K08M3_RS04195 PF00733 Asparagine synthase K08M3_RS04200 PF00999 Sodium/hydrogen exchanger family K08M3_RS04200 PF02254 TrkA-N domain K08M3_RS04205 PF01047 MarR family K08M3_RS04205 PF00480 ROK family K08M3_RS04210 PF01979 Amidohydrolase family K08M3_RS04220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K08M3_RS04220 PF02378 Phosphotransferase system, EIIC K08M3_RS04220 PF00367 phosphotransferase system, EIIB K08M3_RS04225 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M3_RS04225 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain K08M3_RS04230 PF01475 Ferric uptake regulator family K08M3_RS04240 PF00258 Flavodoxin K08M3_RS04250 PF12697 Alpha/beta hydrolase family K08M3_RS04255 PF17206 SeqA protein N-terminal domain K08M3_RS04255 PF03925 SeqA protein C-terminal domain K08M3_RS04260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M3_RS04260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M3_RS04260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M3_RS04260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M3_RS04270 PF01784 NIF3 (NGG1p interacting factor 3) K08M3_RS04275 PF00285 Citrate synthase, C-terminal domain K08M3_RS04280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K08M3_RS04285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K08M3_RS04290 PF00890 FAD binding domain K08M3_RS04290 PF02910 Fumarate reductase flavoprotein C-term K08M3_RS04295 PF13085 2Fe-2S iron-sulfur cluster binding domain K08M3_RS04300 PF16870 2-oxoglutarate dehydrogenase C-terminal K08M3_RS04300 PF02779 Transketolase, pyrimidine binding domain K08M3_RS04300 PF16078 2-oxoglutarate dehydrogenase N-terminus K08M3_RS04300 PF00676 Dehydrogenase E1 component K08M3_RS04305 PF00364 Biotin-requiring enzyme K08M3_RS04305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K08M3_RS04305 PF02817 e3 binding domain K08M3_RS04310 PF08442 ATP-grasp domain K08M3_RS04310 PF00549 CoA-ligase K08M3_RS04315 PF02629 CoA binding domain K08M3_RS04315 PF00549 CoA-ligase K08M3_RS04320 PF00950 ABC 3 transport family K08M3_RS04325 PF00005 ABC transporter K08M3_RS04330 PF01297 Zinc-uptake complex component A periplasmic K08M3_RS04335 PF12833 Helix-turn-helix domain K08M3_RS04335 PF02311 AraC-like ligand binding domain K08M3_RS04340 PF04023 FeoA domain K08M3_RS04345 PF02421 Ferrous iron transport protein B K08M3_RS04345 PF07664 Ferrous iron transport protein B C terminus K08M3_RS04345 PF17910 FeoB cytosolic helical domain K08M3_RS04345 PF07670 Nucleoside recognition K08M3_RS04365 PF05746 DALR anticodon binding domain K08M3_RS04365 PF00750 tRNA synthetases class I (R) K08M3_RS04365 PF03485 Arginyl tRNA synthetase N terminal domain K08M3_RS04370 PF06185 YecM protein K08M3_RS04380 PF00089 Trypsin K08M3_RS04385 PF00551 Formyl transferase K08M3_RS04385 PF01842 ACT domain K08M3_RS04390 PF13307 Helicase C-terminal domain K08M3_RS04390 PF04851 Type III restriction enzyme, res subunit K08M3_RS04395 PF00814 Glycoprotease family K08M3_RS04405 PF03843 Outer membrane lipoprotein Slp family K08M3_RS04410 PF00561 alpha/beta hydrolase fold K08M3_RS04415 PF13193 AMP-binding enzyme C-terminal domain K08M3_RS04415 PF00501 AMP-binding enzyme K08M3_RS04420 PF01612 3'-5' exonuclease K08M3_RS04420 PF00570 HRDC domain K08M3_RS04425 PF03776 Septum formation topological specificity factor MinE K08M3_RS04430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K08M3_RS04435 PF03775 Septum formation inhibitor MinC, C-terminal domain K08M3_RS04435 PF05209 Septum formation inhibitor MinC, N-terminal domain K08M3_RS04440 PF05166 YcgL domain K08M3_RS04445 PF13406 Transglycosylase SLT domain K08M3_RS04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS04450 PF03466 LysR substrate binding domain K08M3_RS04455 PF01773 Na+ dependent nucleoside transporter N-terminus K08M3_RS04455 PF07670 Nucleoside recognition K08M3_RS04455 PF07662 Na+ dependent nucleoside transporter C-terminus K08M3_RS04460 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K08M3_RS04460 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K08M3_RS04470 PF01209 ubiE/COQ5 methyltransferase family K08M3_RS04475 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M3_RS04475 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M3_RS04485 PF07977 FabA-like domain K08M3_RS04490 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M3_RS04490 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M3_RS04515 PF00221 Aromatic amino acid lyase K08M3_RS04520 PF00535 Glycosyl transferase family 2 K08M3_RS04525 PF07977 FabA-like domain K08M3_RS04540 PF00550 Phosphopantetheine attachment site K08M3_RS04545 PF00550 Phosphopantetheine attachment site K08M3_RS04570 PF04820 Tryptophan halogenase K08M3_RS04580 PF00270 DEAD/DEAH box helicase K08M3_RS04580 PF00271 Helicase conserved C-terminal domain K08M3_RS04585 PF02254 TrkA-N domain K08M3_RS04585 PF02080 TrkA-C domain K08M3_RS04590 PF02386 Cation transport protein K08M3_RS04605 PF02696 Uncharacterized ACR, YdiU/UPF0061 family K08M3_RS04610 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M3_RS04615 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K08M3_RS04620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K08M3_RS04630 PF02954 Bacterial regulatory protein, Fis family K08M3_RS04630 PF00158 Sigma-54 interaction domain K08M3_RS04630 PF00072 Response regulator receiver domain K08M3_RS04635 PF02743 Cache domain K08M3_RS04635 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS04645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M3_RS04645 PF05698 Bacterial trigger factor protein (TF) C-terminus K08M3_RS04645 PF05697 Bacterial trigger factor protein (TF) K08M3_RS04650 PF00574 Clp protease K08M3_RS04655 PF07724 AAA domain (Cdc48 subfamily) K08M3_RS04655 PF10431 C-terminal, D2-small domain, of ClpB protein K08M3_RS04655 PF06689 ClpX C4-type zinc finger K08M3_RS04660 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M3_RS04660 PF02190 ATP-dependent protease La (LON) substrate-binding domain K08M3_RS04660 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS04665 PF00216 Bacterial DNA-binding protein K08M3_RS04670 PF13145 PPIC-type PPIASE domain K08M3_RS04690 PF01966 HD domain K08M3_RS04690 PF13286 Phosphohydrolase-associated domain K08M3_RS04700 PF00155 Aminotransferase class I and II K08M3_RS04705 PF00425 chorismate binding enzyme K08M3_RS04710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M3_RS04710 PF16582 Middle domain of thiamine pyrophosphate K08M3_RS04710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M3_RS04715 PF12697 Alpha/beta hydrolase family K08M3_RS04720 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS04725 PF13378 Enolase C-terminal domain-like K08M3_RS04730 PF13193 AMP-binding enzyme C-terminal domain K08M3_RS04730 PF00501 AMP-binding enzyme K08M3_RS04740 PF03601 Conserved hypothetical protein 698 K08M3_RS04745 PF07690 Major Facilitator Superfamily K08M3_RS04790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS04790 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS04795 PF00873 AcrB/AcrD/AcrF family K08M3_RS04810 PF00291 Pyridoxal-phosphate dependent enzyme K08M3_RS04815 PF01037 Lrp/AsnC ligand binding domain K08M3_RS04815 PF13404 AsnC-type helix-turn-helix domain K08M3_RS04830 PF09619 Type III secretion system lipoprotein chaperone (YscW) K08M3_RS04835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M3_RS04845 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS04855 PF00588 SpoU rRNA Methylase family K08M3_RS04855 PF08032 RNA 2'-O ribose methyltransferase substrate binding K08M3_RS04860 PF00478 IMP dehydrogenase / GMP reductase domain K08M3_RS04860 PF00571 CBS domain K08M3_RS04865 PF00403 Heavy-metal-associated domain K08M3_RS04870 PF01048 Phosphorylase superfamily K08M3_RS04880 PF00672 HAMP domain K08M3_RS04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS04885 PF01230 HIT domain K08M3_RS04900 PF13036 Peptidoglycan-synthase activator LpoB K08M3_RS04900 PF08139 Prokaryotic membrane lipoprotein lipid attachment site K08M3_RS04910 PF05728 Uncharacterised protein family (UPF0227) K08M3_RS04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS04930 PF00270 DEAD/DEAH box helicase K08M3_RS04930 PF17757 UvrB interaction domain K08M3_RS04930 PF02559 CarD-like/TRCF domain K08M3_RS04930 PF03461 TRCF domain K08M3_RS04930 PF00271 Helicase conserved C-terminal domain K08M3_RS04940 PF12704 MacB-like periplasmic core domain K08M3_RS04940 PF02687 FtsX-like permease family K08M3_RS04945 PF00005 ABC transporter K08M3_RS04950 PF02687 FtsX-like permease family K08M3_RS04950 PF12704 MacB-like periplasmic core domain K08M3_RS04960 PF00753 Metallo-beta-lactamase superfamily K08M3_RS04960 PF13567 Domain of unknown function (DUF4131) K08M3_RS04960 PF03772 Competence protein K08M3_RS04965 PF00664 ABC transporter transmembrane region K08M3_RS04965 PF00005 ABC transporter K08M3_RS04970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase K08M3_RS04975 PF03966 Trm112p-like protein K08M3_RS04980 PF02348 Cytidylyltransferase K08M3_RS04985 PF04293 SpoVR like protein K08M3_RS04990 PF04285 Protein of unknown function (DUF444) K08M3_RS04995 PF06798 PrkA serine protein kinase C-terminal domain K08M3_RS04995 PF08298 PrkA AAA domain K08M3_RS05005 PF03887 YfbU domain K08M3_RS05015 PF04055 Radical SAM superfamily K08M3_RS05025 PF02901 Pyruvate formate lyase-like K08M3_RS05025 PF01228 Glycine radical K08M3_RS05040 PF00005 ABC transporter K08M3_RS05045 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS05055 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS05065 PF03372 Endonuclease/Exonuclease/phosphatase family K08M3_RS05070 PF10689 Protein of unknown function (DUF2496) K08M3_RS05075 PF07445 Primosomal replication protein priC K08M3_RS05080 PF01925 Sulfite exporter TauE/SafE K08M3_RS05085 PF06733 DEAD_2 K08M3_RS05085 PF13307 Helicase C-terminal domain K08M3_RS05100 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K08M3_RS05105 PF00849 RNA pseudouridylate synthase K08M3_RS05110 PF03971 Monomeric isocitrate dehydrogenase K08M3_RS05115 PF00313 'Cold-shock' DNA-binding domain K08M3_RS05120 PF02617 ATP-dependent Clp protease adaptor protein ClpS K08M3_RS05125 PF17871 AAA lid domain K08M3_RS05125 PF02861 Clp amino terminal domain, pathogenicity island component K08M3_RS05125 PF10431 C-terminal, D2-small domain, of ClpB protein K08M3_RS05125 PF07724 AAA domain (Cdc48 subfamily) K08M3_RS05125 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS05130 PF01176 Translation initiation factor 1A / IF-1 K08M3_RS05135 PF04376 Arginine-tRNA-protein transferase, N terminus K08M3_RS05135 PF04377 Arginine-tRNA-protein transferase, C terminus K08M3_RS05140 PF03588 Leucyl/phenylalanyl-tRNA protein transferase K08M3_RS05150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K08M3_RS05155 PF10692 Protein of unknown function (DUF2498) K08M3_RS05160 PF01751 Toprim domain K08M3_RS05160 PF01131 DNA topoisomerase K08M3_RS05160 PF08272 Topoisomerase I zinc-ribbon-like K08M3_RS05160 PF01396 Topoisomerase DNA binding C4 zinc finger K08M3_RS05165 PF00483 Nucleotidyl transferase K08M3_RS05170 PF08323 Starch synthase catalytic domain K08M3_RS05170 PF00534 Glycosyl transferases group 1 K08M3_RS05190 PF04994 TfoX C-terminal domain K08M3_RS05190 PF04993 TfoX N-terminal domain K08M3_RS05195 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS05200 PF02613 Nitrate reductase delta subunit K08M3_RS05205 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS05205 PF00072 Response regulator receiver domain K08M3_RS05210 PF02698 DUF218 domain K08M3_RS05215 PF13847 Methyltransferase domain K08M3_RS05220 PF17192 MukF middle domain K08M3_RS05220 PF17193 MukF C-terminal domain K08M3_RS05220 PF03882 MukF winged-helix domain K08M3_RS05225 PF04288 MukE-like family K08M3_RS05230 PF16330 MukB hinge domain K08M3_RS05230 PF04310 MukB N-terminal K08M3_RS05250 PF08443 RimK-like ATP-grasp domain K08M3_RS05250 PF18030 RimK PreATP-grasp domain K08M3_RS05260 PF08003 Protein of unknown function (DUF1698) K08M3_RS05265 PF13649 Methyltransferase domain K08M3_RS05270 PF01904 Protein of unknown function DUF72 K08M3_RS05275 PF00152 tRNA synthetases class II (D, K and N) K08M3_RS05275 PF02938 GAD domain K08M3_RS05275 PF01336 OB-fold nucleic acid binding domain K08M3_RS05280 PF01709 Transcriptional regulator K08M3_RS05285 PF02075 Crossover junction endodeoxyribonuclease RuvC K08M3_RS05290 PF01330 RuvA N terminal domain K08M3_RS05290 PF07499 RuvA, C-terminal domain K08M3_RS05295 PF05491 RuvB C-terminal winged helix domain K08M3_RS05295 PF17864 RuvB AAA lid domain K08M3_RS05295 PF05496 Holliday junction DNA helicase RuvB P-loop domain K08M3_RS05300 PF01654 Cytochrome bd terminal oxidase subunit I K08M3_RS05305 PF02322 Cytochrome bd terminal oxidase subunit II K08M3_RS05310 PF08173 Membrane bound YbgT-like protein K08M3_RS05320 PF03061 Thioesterase superfamily K08M3_RS05325 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS05330 PF02472 Biopolymer transport protein ExbD/TolR K08M3_RS05340 PF07676 WD40-like Beta Propeller Repeat K08M3_RS05340 PF04052 TolB amino-terminal domain K08M3_RS05345 PF00691 OmpA family K08M3_RS05350 PF16331 TolA binding protein trimerisation K08M3_RS05350 PF13174 Tetratricopeptide repeat K08M3_RS05375 PF01709 Transcriptional regulator K08M3_RS05380 PF02075 Crossover junction endodeoxyribonuclease RuvC K08M3_RS05385 PF01330 RuvA N terminal domain K08M3_RS05385 PF07499 RuvA, C-terminal domain K08M3_RS05390 PF17864 RuvB AAA lid domain K08M3_RS05390 PF05491 RuvB C-terminal winged helix domain K08M3_RS05390 PF05496 Holliday junction DNA helicase RuvB P-loop domain K08M3_RS05395 PF01654 Cytochrome bd terminal oxidase subunit I K08M3_RS05400 PF02322 Cytochrome bd terminal oxidase subunit II K08M3_RS05405 PF08173 Membrane bound YbgT-like protein K08M3_RS05415 PF03061 Thioesterase superfamily K08M3_RS05420 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS05425 PF02472 Biopolymer transport protein ExbD/TolR K08M3_RS05435 PF04052 TolB amino-terminal domain K08M3_RS05435 PF07676 WD40-like Beta Propeller Repeat K08M3_RS05440 PF00691 OmpA family K08M3_RS05445 PF16331 TolA binding protein trimerisation K08M3_RS05445 PF13174 Tetratricopeptide repeat K08M3_RS05450 PF02445 Quinolinate synthetase A protein K08M3_RS05460 PF03994 Domain of Unknown Function (DUF350) K08M3_RS05470 PF03738 Glutathionylspermidine synthase preATP-grasp K08M3_RS05480 PF00072 Response regulator receiver domain K08M3_RS05480 PF09308 LuxQ, periplasmic K08M3_RS05480 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS05485 PF06610 L-alanine exporter K08M3_RS05495 PF02322 Cytochrome bd terminal oxidase subunit II K08M3_RS05500 PF01654 Cytochrome bd terminal oxidase subunit I K08M3_RS05520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS05520 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS05525 PF00873 AcrB/AcrD/AcrF family K08M3_RS05540 PF00579 tRNA synthetases class I (W and Y) K08M3_RS05550 PF03372 Endonuclease/Exonuclease/phosphatase family K08M3_RS05560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS05560 PF00672 HAMP domain K08M3_RS05565 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K08M3_RS05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS05575 PF03466 LysR substrate binding domain K08M3_RS05585 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K08M3_RS05585 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K08M3_RS05590 PF01037 Lrp/AsnC ligand binding domain K08M3_RS05595 PF13491 4TM region of DNA translocase FtsK/SpoIIIE K08M3_RS05595 PF01580 FtsK/SpoIIIE family K08M3_RS05595 PF09397 Ftsk gamma domain K08M3_RS05595 PF17854 FtsK alpha domain K08M3_RS05600 PF03548 Outer membrane lipoprotein carrier protein LolA K08M3_RS05605 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS05605 PF16193 AAA C-terminal domain K08M3_RS05605 PF12002 MgsA AAA+ ATPase C terminal K08M3_RS05610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M3_RS05610 PF02403 Seryl-tRNA synthetase N-terminal domain K08M3_RS05625 PF01258 Prokaryotic dksA/traR C4-type zinc finger K08M3_RS05630 PF00202 Aminotransferase class-III K08M3_RS05635 PF06968 Biotin and Thiamin Synthesis associated domain K08M3_RS05635 PF04055 Radical SAM superfamily K08M3_RS05640 PF00155 Aminotransferase class I and II K08M3_RS05645 PF08241 Methyltransferase domain K08M3_RS05660 PF01435 Peptidase family M48 K08M3_RS05670 PF00106 short chain dehydrogenase K08M3_RS05695 PF16036 Chalcone isomerase-like K08M3_RS05705 PF00206 Lyase K08M3_RS05705 PF08328 Adenylosuccinate lyase C-terminal K08M3_RS05710 PF04356 Protein of unknown function (DUF489) K08M3_RS05725 PF00294 pfkB family carbohydrate kinase K08M3_RS05730 PF00816 H-NS histone family K08M3_RS05735 PF03553 Na+/H+ antiporter family K08M3_RS05740 PF01634 ATP phosphoribosyltransferase K08M3_RS05740 PF08029 HisG, C-terminal domain K08M3_RS05745 PF00815 Histidinol dehydrogenase K08M3_RS05750 PF00155 Aminotransferase class I and II K08M3_RS05755 PF08645 Polynucleotide kinase 3 phosphatase K08M3_RS05755 PF00475 Imidazoleglycerol-phosphate dehydratase K08M3_RS05760 PF00117 Glutamine amidotransferase class-I K08M3_RS05765 PF00977 Histidine biosynthesis protein K08M3_RS05770 PF00977 Histidine biosynthesis protein K08M3_RS05775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase K08M3_RS05775 PF01502 Phosphoribosyl-AMP cyclohydrolase K08M3_RS05780 PF02810 SEC-C motif K08M3_RS05785 PF00563 EAL domain K08M3_RS05785 PF08668 HDOD domain K08M3_RS05790 PF00149 Calcineurin-like phosphoesterase K08M3_RS05795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M3_RS05800 PF01406 tRNA synthetases class I (C) catalytic domain K08M3_RS05800 PF09190 DALR domain K08M3_RS05805 PF00265 Thymidine kinase K08M3_RS05835 PF01226 Formate/nitrite transporter K08M3_RS05845 PF03649 Uncharacterised protein family (UPF0014) K08M3_RS05850 PF06796 Periplasmic nitrate reductase protein NapE K08M3_RS05855 PF03264 NapC/NirT cytochrome c family, N-terminal region K08M3_RS05860 PF00384 Molybdopterin oxidoreductase K08M3_RS05860 PF01568 Molydopterin dinucleotide binding domain K08M3_RS05860 PF18364 Molybdopterin oxidoreductase N-terminal domain K08M3_RS05865 PF16874 Glycosyl hydrolase family 36 C-terminal domain K08M3_RS05865 PF16875 Glycosyl hydrolase family 36 N-terminal domain K08M3_RS05875 PF01368 DHH family K08M3_RS05875 PF02833 DHHA2 domain K08M3_RS05885 PF00005 ABC transporter K08M3_RS05890 PF00005 ABC transporter K08M3_RS05890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS05895 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS05895 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M3_RS05900 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS05905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS05910 PF00158 Sigma-54 interaction domain K08M3_RS05910 PF02954 Bacterial regulatory protein, Fis family K08M3_RS05915 PF04012 PspA/IM30 family K08M3_RS05920 PF06667 Phage shock protein B K08M3_RS05925 PF04024 PspC domain K08M3_RS05935 PF13533 Biotin-lipoyl like K08M3_RS05940 PF00873 AcrB/AcrD/AcrF family K08M3_RS05945 PF03352 Methyladenine glycosylase K08M3_RS05950 PF03280 Proteobacterial lipase chaperone protein K08M3_RS05955 PF00561 alpha/beta hydrolase fold K08M3_RS05960 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M3_RS05965 PF13091 PLD-like domain K08M3_RS05965 PF13396 Phospholipase_D-nuclease N-terminal K08M3_RS05970 PF00209 Sodium:neurotransmitter symporter family K08M3_RS05975 PF00849 RNA pseudouridylate synthase K08M3_RS05985 PF00175 Oxidoreductase NAD-binding domain K08M3_RS05985 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M3_RS05985 PF00970 Oxidoreductase FAD-binding domain K08M3_RS05990 PF03063 Prismane/CO dehydrogenase family K08M3_RS05995 PF00158 Sigma-54 interaction domain K08M3_RS05995 PF01590 GAF domain K08M3_RS06005 PF01066 CDP-alcohol phosphatidyltransferase K08M3_RS06010 PF00005 ABC transporter K08M3_RS06015 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS06020 PF13416 Bacterial extracellular solute-binding protein K08M3_RS06030 PF06945 Protein of unknown function (DUF1289) K08M3_RS06040 PF02872 5'-nucleotidase, C-terminal domain K08M3_RS06040 PF00149 Calcineurin-like phosphoesterase K08M3_RS06050 PF01386 Ribosomal L25p family K08M3_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS06060 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS06060 PF00072 Response regulator receiver domain K08M3_RS06070 PF04851 Type III restriction enzyme, res subunit K08M3_RS06070 PF00271 Helicase conserved C-terminal domain K08M3_RS06075 PF01479 S4 domain K08M3_RS06075 PF00849 RNA pseudouridylate synthase K08M3_RS06085 PF07690 Major Facilitator Superfamily K08M3_RS06095 PF13460 NAD(P)H-binding K08M3_RS06095 PF11066 Protein of unknown function (DUF2867) K08M3_RS06100 PF01554 MatE K08M3_RS06105 PF00005 ABC transporter K08M3_RS06120 PF06965 Na+/H+ antiporter 1 K08M3_RS06130 PF16295 Tetracyclin repressor-like, C-terminal domain K08M3_RS06130 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS06135 PF09317 Domain of unknown function (DUF1974) K08M3_RS06135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M3_RS06135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M3_RS06135 PF02770 Acyl-CoA dehydrogenase, middle domain K08M3_RS06140 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K08M3_RS06140 PF12241 Trans-2-enoyl-CoA reductase catalytic region K08M3_RS06140 PF07055 Enoyl reductase FAD binding domain K08M3_RS06145 PF06826 Predicted Permease Membrane Region K08M3_RS06145 PF02080 TrkA-C domain K08M3_RS06150 PF00462 Glutaredoxin K08M3_RS06155 PF00465 Iron-containing alcohol dehydrogenase K08M3_RS06160 PF01418 Helix-turn-helix domain, rpiR family K08M3_RS06160 PF01380 SIS domain K08M3_RS06165 PF00282 Pyridoxal-dependent decarboxylase conserved domain K08M3_RS06175 PF03956 Lysine exporter LysO K08M3_RS06195 PF04993 TfoX N-terminal domain K08M3_RS06195 PF04994 TfoX C-terminal domain K08M3_RS06210 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS06210 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS06220 PF00266 Aminotransferase class-V K08M3_RS06225 PF00291 Pyridoxal-phosphate dependent enzyme K08M3_RS06230 PF00664 ABC transporter transmembrane region K08M3_RS06230 PF00005 ABC transporter K08M3_RS06235 PF00005 ABC transporter K08M3_RS06235 PF00664 ABC transporter transmembrane region K08M3_RS06240 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS06250 PF00266 Aminotransferase class-V K08M3_RS06260 PF00072 Response regulator receiver domain K08M3_RS06260 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS06265 PF00939 Sodium:sulfate symporter transmembrane region K08M3_RS06270 PF02698 DUF218 domain K08M3_RS06275 PF03949 Malic enzyme, NAD binding domain K08M3_RS06275 PF00390 Malic enzyme, N-terminal domain K08M3_RS06280 PF04408 Helicase associated domain (HA2) K08M3_RS06280 PF11898 Domain of unknown function (DUF3418) K08M3_RS06280 PF00271 Helicase conserved C-terminal domain K08M3_RS06280 PF00270 DEAD/DEAH box helicase K08M3_RS06280 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K08M3_RS06290 PF09423 PhoD-like phosphatase K08M3_RS06290 PF16655 PhoD-like phosphatase, N-terminal domain K08M3_RS06295 PF01259 SAICAR synthetase K08M3_RS06315 PF00691 OmpA family K08M3_RS06315 PF05736 OprF membrane domain K08M3_RS06330 PF13183 4Fe-4S dicluster domain K08M3_RS06330 PF01565 FAD binding domain K08M3_RS06330 PF02913 FAD linked oxidases, C-terminal domain K08M3_RS06335 PF04191 Phospholipid methyltransferase K08M3_RS06345 PF00221 Aromatic amino acid lyase K08M3_RS06350 PF17392 Urocanase C-terminal domain K08M3_RS06350 PF01175 Urocanase Rossmann-like domain K08M3_RS06350 PF17391 Urocanase N-terminal domain K08M3_RS06355 PF00491 Arginase family K08M3_RS06360 PF01979 Amidohydrolase family K08M3_RS06365 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS06365 PF07702 UTRA domain K08M3_RS06380 PF02824 TGS domain K08M3_RS06380 PF03129 Anticodon binding domain K08M3_RS06380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M3_RS06380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M3_RS06385 PF05198 Translation initiation factor IF-3, N-terminal domain K08M3_RS06385 PF00707 Translation initiation factor IF-3, C-terminal domain K08M3_RS06390 PF01632 Ribosomal protein L35 K08M3_RS06395 PF00453 Ribosomal protein L20 K08M3_RS06400 PF01906 Putative heavy-metal-binding K08M3_RS06435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain K08M3_RS06435 PF01409 tRNA synthetases class II core domain (F) K08M3_RS06440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain K08M3_RS06440 PF01588 Putative tRNA binding domain K08M3_RS06440 PF03483 B3/4 domain K08M3_RS06440 PF03484 tRNA synthetase B5 domain K08M3_RS06440 PF03147 Ferredoxin-fold anticodon binding domain K08M3_RS06450 PF00216 Bacterial DNA-binding protein K08M3_RS06460 PF05724 Thiopurine S-methyltransferase (TPMT) K08M3_RS06465 PF02222 ATP-grasp domain K08M3_RS06470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M3_RS06470 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region K08M3_RS06475 PF04172 LrgB-like family K08M3_RS06480 PF03788 LrgA family K08M3_RS06485 PF00929 Exonuclease K08M3_RS06485 PF08411 Exonuclease C-terminal K08M3_RS06540 PF03120 NAD-dependent DNA ligase OB-fold domain K08M3_RS06540 PF00533 BRCA1 C Terminus (BRCT) domain K08M3_RS06540 PF01653 NAD-dependent DNA ligase adenylation domain K08M3_RS06540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K08M3_RS06540 PF12826 Helix-hairpin-helix motif K08M3_RS06565 PF01695 IstB-like ATP binding protein K08M3_RS06710 PF00375 Sodium:dicarboxylate symporter family K08M3_RS06715 PF13460 NAD(P)H-binding K08M3_RS06720 PF02277 Phosphoribosyltransferase K08M3_RS06725 PF02654 Cobalamin-5-phosphate synthase K08M3_RS06730 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase K08M3_RS06745 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M3_RS06750 PF01032 FecCD transport family K08M3_RS06755 PF00005 ABC transporter K08M3_RS06775 PF03466 LysR substrate binding domain K08M3_RS06775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS06785 PF01863 Protein of unknown function DUF45 K08M3_RS06790 PF05971 RNA methyltransferase K08M3_RS06810 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS06815 PF00171 Aldehyde dehydrogenase family K08M3_RS06820 PF05544 Proline racemase K08M3_RS06825 PF01266 FAD dependent oxidoreductase K08M3_RS06825 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K08M3_RS06835 PF02423 Ornithine cyclodeaminase/mu-crystallin family K08M3_RS06840 PF00701 Dihydrodipicolinate synthetase family K08M3_RS06845 PF08402 TOBE domain K08M3_RS06845 PF00005 ABC transporter K08M3_RS06850 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS06855 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS06865 PF01752 Collagenase K08M3_RS06865 PF08453 Peptidase family M9 N-terminal K08M3_RS06875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS06875 PF00005 ABC transporter K08M3_RS06880 PF00005 ABC transporter K08M3_RS06880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS06885 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M3_RS06890 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS06895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS06900 PF07687 Peptidase dimerisation domain K08M3_RS06900 PF01546 Peptidase family M20/M25/M40 K08M3_RS06905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M3_RS06910 PF04209 homogentisate 1,2-dioxygenase K08M3_RS06920 PF02798 Glutathione S-transferase, N-terminal domain K08M3_RS06920 PF14497 Glutathione S-transferase, C-terminal domain K08M3_RS06970 PF07007 Lysozyme inhibitor LprI K08M3_RS06995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family K08M3_RS07010 PF03553 Na+/H+ antiporter family K08M3_RS07015 PF00120 Glutamine synthetase, catalytic domain K08M3_RS07025 PF07722 Peptidase C26 K08M3_RS07030 PF01381 Helix-turn-helix K08M3_RS07030 PF07883 Cupin domain K08M3_RS07035 PF00171 Aldehyde dehydrogenase family K08M3_RS07040 PF01266 FAD dependent oxidoreductase K08M3_RS07045 PF00795 Carbon-nitrogen hydrolase K08M3_RS07050 PF04371 Porphyromonas-type peptidyl-arginine deiminase K08M3_RS07055 PF00171 Aldehyde dehydrogenase family K08M3_RS07060 PF00202 Aminotransferase class-III K08M3_RS07065 PF12792 CSS motif domain associated with EAL K08M3_RS07065 PF00563 EAL domain K08M3_RS07075 PF01047 MarR family K08M3_RS07080 PF04237 YjbR K08M3_RS07105 PF00072 Response regulator receiver domain K08M3_RS07105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K08M3_RS07105 PF01627 Hpt domain K08M3_RS07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS07105 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS07105 PF00672 HAMP domain K08M3_RS07110 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS07110 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS07110 PF00563 EAL domain K08M3_RS07125 PF04204 Homoserine O-succinyltransferase K08M3_RS07135 PF00893 Small Multidrug Resistance protein K08M3_RS07140 PF03279 Bacterial lipid A biosynthesis acyltransferase K08M3_RS07145 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K08M3_RS07150 PF07508 Recombinase K08M3_RS07150 PF13408 Recombinase zinc beta ribbon domain K08M3_RS07150 PF00239 Resolvase, N terminal domain K08M3_RS07180 PF02796 Helix-turn-helix domain of resolvase K08M3_RS07180 PF00239 Resolvase, N terminal domain K08M3_RS07275 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K08M3_RS07280 PF01810 LysE type translocator K08M3_RS07290 PF01235 Sodium:alanine symporter family K08M3_RS07315 PF00884 Sulfatase K08M3_RS07320 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K08M3_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS07330 PF00005 ABC transporter K08M3_RS07330 PF00571 CBS domain K08M3_RS07345 PF02028 BCCT, betaine/carnitine/choline family transporter K08M3_RS07350 PF00583 Acetyltransferase (GNAT) family K08M3_RS07355 PF00202 Aminotransferase class-III K08M3_RS07360 PF06339 Ectoine synthase K08M3_RS07365 PF13840 ACT domain K08M3_RS07365 PF00696 Amino acid kinase family K08M3_RS07370 PF00884 Sulfatase K08M3_RS07380 PF03781 Sulfatase-modifying factor enzyme 1 K08M3_RS07385 PF04055 Radical SAM superfamily K08M3_RS07385 PF13186 Iron-sulfur cluster-binding domain K08M3_RS07400 PF00884 Sulfatase K08M3_RS07405 PF00884 Sulfatase K08M3_RS07415 PF00005 ABC transporter K08M3_RS07415 PF03412 Peptidase C39 family K08M3_RS07415 PF00664 ABC transporter transmembrane region K08M3_RS07425 PF02321 Outer membrane efflux protein K08M3_RS07440 PF08220 DeoR-like helix-turn-helix domain K08M3_RS07440 PF00455 DeoR C terminal sensor domain K08M3_RS07445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain K08M3_RS07445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K08M3_RS07450 PF03928 Haem-degrading K08M3_RS07455 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS07455 PF00072 Response regulator receiver domain K08M3_RS07475 PF00939 Sodium:sulfate symporter transmembrane region K08M3_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS07480 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS07485 PF02954 Bacterial regulatory protein, Fis family K08M3_RS07485 PF00072 Response regulator receiver domain K08M3_RS07485 PF00158 Sigma-54 interaction domain K08M3_RS07490 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS07490 PF00563 EAL domain K08M3_RS07490 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS07495 PF01966 HD domain K08M3_RS07495 PF11871 Domain of unknown function (DUF3391) K08M3_RS07500 PF01810 LysE type translocator K08M3_RS07505 PF11230 Protein of unknown function (DUF3029) K08M3_RS07510 PF04055 Radical SAM superfamily K08M3_RS07520 PF03741 Integral membrane protein TerC family K08M3_RS07530 PF01966 HD domain K08M3_RS07535 PF00465 Iron-containing alcohol dehydrogenase K08M3_RS07540 PF03222 Tryptophan/tyrosine permease family K08M3_RS07545 PF01966 HD domain K08M3_RS07545 PF11871 Domain of unknown function (DUF3391) K08M3_RS07555 PF00005 ABC transporter K08M3_RS07560 PF01497 Periplasmic binding protein K08M3_RS07565 PF01032 FecCD transport family K08M3_RS07570 PF00593 TonB dependent receptor K08M3_RS07570 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS07580 PF00005 ABC transporter K08M3_RS07580 PF00664 ABC transporter transmembrane region K08M3_RS07585 PF00664 ABC transporter transmembrane region K08M3_RS07585 PF00005 ABC transporter K08M3_RS07590 PF08334 Type II secretion system (T2SS), protein G K08M3_RS07590 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS07600 PF03466 LysR substrate binding domain K08M3_RS07600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS07610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain K08M3_RS07610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K08M3_RS07625 PF00012 Hsp70 protein K08M3_RS07630 PF00012 Hsp70 protein K08M3_RS07640 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS07675 PF02525 Flavodoxin-like fold K08M3_RS07680 PF00271 Helicase conserved C-terminal domain K08M3_RS07680 PF00270 DEAD/DEAH box helicase K08M3_RS07680 PF11898 Domain of unknown function (DUF3418) K08M3_RS07680 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K08M3_RS07680 PF04408 Helicase associated domain (HA2) K08M3_RS07695 PF02028 BCCT, betaine/carnitine/choline family transporter K08M3_RS07705 PF02397 Bacterial sugar transferase K08M3_RS07715 PF00534 Glycosyl transferases group 1 K08M3_RS07715 PF13439 Glycosyltransferase Family 4 K08M3_RS07745 PF00534 Glycosyl transferases group 1 K08M3_RS07745 PF13439 Glycosyltransferase Family 4 K08M3_RS07750 PF13439 Glycosyltransferase Family 4 K08M3_RS07750 PF00534 Glycosyl transferases group 1 K08M3_RS07755 PF00072 Response regulator receiver domain K08M3_RS07755 PF00158 Sigma-54 interaction domain K08M3_RS07755 PF02954 Bacterial regulatory protein, Fis family K08M3_RS07770 PF02563 Polysaccharide biosynthesis/export protein K08M3_RS07770 PF10531 SLBB domain K08M3_RS07780 PF01740 STAS domain K08M3_RS07790 PF14743 DNA ligase OB-like domain K08M3_RS07790 PF01068 ATP dependent DNA ligase domain K08M3_RS07800 PF01554 MatE K08M3_RS07805 PF00677 Lumazine binding domain K08M3_RS07815 PF03881 Fructosamine kinase K08M3_RS07820 PF01339 CheB methylesterase K08M3_RS07820 PF00072 Response regulator receiver domain K08M3_RS07825 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS07825 PF05230 MASE2 domain K08M3_RS07835 PF00877 NlpC/P60 family K08M3_RS07870 PF03942 DTW domain K08M3_RS07875 PF00480 ROK family K08M3_RS07885 PF00994 Probable molybdopterin binding domain K08M3_RS07885 PF03454 MoeA C-terminal region (domain IV) K08M3_RS07885 PF03453 MoeA N-terminal region (domain I and II) K08M3_RS07890 PF12804 MobA-like NTP transferase domain K08M3_RS07895 PF00005 ABC transporter K08M3_RS07895 PF08402 TOBE domain K08M3_RS07900 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS07905 PF12849 PBP superfamily domain K08M3_RS07910 PF00158 Sigma-54 interaction domain K08M3_RS07910 PF02954 Bacterial regulatory protein, Fis family K08M3_RS07910 PF00072 Response regulator receiver domain K08M3_RS07915 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS07920 PF12848 ABC transporter K08M3_RS07920 PF00005 ABC transporter K08M3_RS07925 PF02634 FdhD/NarQ family K08M3_RS07945 PF02613 Nitrate reductase delta subunit K08M3_RS07955 PF00384 Molybdopterin oxidoreductase K08M3_RS07955 PF01568 Molydopterin dinucleotide binding domain K08M3_RS07955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS07960 PF13247 4Fe-4S dicluster domain K08M3_RS07975 PF03527 RHS protein K08M3_RS07975 PF05593 RHS Repeat K08M3_RS07985 PF00909 Ammonium Transporter Family K08M3_RS07990 PF02146 Sir2 family K08M3_RS07995 PF13416 Bacterial extracellular solute-binding protein K08M3_RS08000 PF13416 Bacterial extracellular solute-binding protein K08M3_RS08005 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS08015 PF00005 ABC transporter K08M3_RS08015 PF08402 TOBE domain K08M3_RS08035 PF01171 PP-loop family K08M3_RS08040 PF00582 Universal stress protein family K08M3_RS08045 PF00027 Cyclic nucleotide-binding domain K08M3_RS08045 PF13545 Crp-like helix-turn-helix domain K08M3_RS08060 PF00403 Heavy-metal-associated domain K08M3_RS08070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M3_RS08070 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP K08M3_RS08085 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M3_RS08100 PF09308 LuxQ, periplasmic K08M3_RS08100 PF00072 Response regulator receiver domain K08M3_RS08100 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS08120 PF17414 MatP C-terminal ribbon-helix-helix domain K08M3_RS08120 PF06303 MatP N-terminal domain K08M3_RS08125 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M3_RS08125 PF13654 AAA domain K08M3_RS08130 PF07977 FabA-like domain K08M3_RS08135 PF04957 Ribosome modulation factor K08M3_RS08145 PF00005 ABC transporter K08M3_RS08145 PF16326 ABC transporter C-terminal domain K08M3_RS08145 PF12848 ABC transporter K08M3_RS08155 PF10672 S-adenosylmethionine-dependent methyltransferase K08M3_RS08155 PF01170 Putative RNA methylase family UPF0020 K08M3_RS08155 PF02926 THUMP domain K08M3_RS08160 PF07126 Cell-division protein ZapC K08M3_RS08165 PF01180 Dihydroorotate dehydrogenase K08M3_RS08170 PF05088 Bacterial NAD-glutamate dehydrogenase K08M3_RS08180 PF17432 Domain of unknown function (DUF3458_C) ARM repeats K08M3_RS08180 PF11940 Domain of unknown function (DUF3458) Ig-like fold K08M3_RS08180 PF01433 Peptidase family M1 domain K08M3_RS08190 PF17804 Tail specific protease N-terminal domain K08M3_RS08190 PF11818 C-terminal domain of tail specific protease (DUF3340) K08M3_RS08190 PF03572 Peptidase family S41 K08M3_RS08190 PF00595 PDZ domain K08M3_RS08195 PF04352 ProQ/FINO family K08M3_RS08195 PF17516 ProQ C-terminal domain K08M3_RS08200 PF13185 GAF domain K08M3_RS08205 PF00664 ABC transporter transmembrane region K08M3_RS08205 PF00005 ABC transporter K08M3_RS08210 PF04403 Paraquat-inducible protein A K08M3_RS08215 PF02470 MlaD protein K08M3_RS08220 PF01189 16S rRNA methyltransferase RsmB/F K08M3_RS08220 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF K08M3_RS08220 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF K08M3_RS08240 PF00793 DAHP synthetase I family K08M3_RS08245 PF04461 Protein of unknown function (DUF520) K08M3_RS08250 PF14824 Sirohaem biosynthesis protein central K08M3_RS08250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M3_RS08250 PF10414 Sirohaem synthase dimerisation region K08M3_RS08260 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS08265 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS08270 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS08275 PF00005 ABC transporter K08M3_RS08280 PF01027 Inhibitor of apoptosis-promoting Bax1 K08M3_RS08295 PF04358 DsrC like protein K08M3_RS08300 PF00708 Acylphosphatase K08M3_RS08305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS08305 PF00672 HAMP domain K08M3_RS08305 PF17200 Single Cache domain 2 K08M3_RS08310 PF10672 S-adenosylmethionine-dependent methyltransferase K08M3_RS08310 PF17785 PUA-like domain K08M3_RS08325 PF00691 OmpA family K08M3_RS08340 PF00691 OmpA family K08M3_RS08340 PF05736 OprF membrane domain K08M3_RS08350 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS08355 PF09339 IclR helix-turn-helix domain K08M3_RS08355 PF01614 Bacterial transcriptional regulator K08M3_RS08365 PF00248 Aldo/keto reductase family K08M3_RS08370 PF03466 LysR substrate binding domain K08M3_RS08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS08380 PF03466 LysR substrate binding domain K08M3_RS08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS08385 PF07690 Major Facilitator Superfamily K08M3_RS08395 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M3_RS08395 PF00107 Zinc-binding dehydrogenase K08M3_RS08395 PF08240 Alcohol dehydrogenase GroES-like domain K08M3_RS08395 PF00698 Acyl transferase domain K08M3_RS08395 PF14765 Polyketide synthase dehydratase K08M3_RS08395 PF16197 Ketoacyl-synthetase C-terminal extension K08M3_RS08395 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M3_RS08395 PF08659 KR domain K08M3_RS08395 PF00550 Phosphopantetheine attachment site K08M3_RS08400 PF02311 AraC-like ligand binding domain K08M3_RS08400 PF12833 Helix-turn-helix domain K08M3_RS08405 PF00857 Isochorismatase family K08M3_RS08410 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS08420 PF00107 Zinc-binding dehydrogenase K08M3_RS08420 PF08240 Alcohol dehydrogenase GroES-like domain K08M3_RS08425 PF02574 Homocysteine S-methyltransferase K08M3_RS08425 PF00809 Pterin binding enzyme K08M3_RS08425 PF02965 Vitamin B12 dependent methionine synthase, activation domain K08M3_RS08425 PF02607 B12 binding domain K08M3_RS08425 PF02310 B12 binding domain K08M3_RS08430 PF00005 ABC transporter K08M3_RS08435 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS08440 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS08450 PF00267 Gram-negative porin K08M3_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS08455 PF03466 LysR substrate binding domain K08M3_RS08465 PF00873 AcrB/AcrD/AcrF family K08M3_RS08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS08470 PF03466 LysR substrate binding domain K08M3_RS08480 PF03466 LysR substrate binding domain K08M3_RS08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS08485 PF01810 LysE type translocator K08M3_RS08495 PF06508 Queuosine biosynthesis protein QueC K08M3_RS08500 PF04055 Radical SAM superfamily K08M3_RS08515 PF00089 Trypsin K08M3_RS08525 PF16177 Acetyl-coenzyme A synthetase N-terminus K08M3_RS08525 PF00501 AMP-binding enzyme K08M3_RS08525 PF13193 AMP-binding enzyme C-terminal domain K08M3_RS08530 PF04303 PrpF protein K08M3_RS08535 PF00694 Aconitase C-terminal domain K08M3_RS08535 PF00330 Aconitase family (aconitate hydratase) K08M3_RS08540 PF00285 Citrate synthase, C-terminal domain K08M3_RS08570 PF01970 Tripartite tricarboxylate transporter TctA family K08M3_RS08580 PF01925 Sulfite exporter TauE/SafE K08M3_RS08585 PF16868 NMT1-like family K08M3_RS08590 PF05844 YopD protein K08M3_RS08600 PF07720 Tetratricopeptide repeat K08M3_RS08605 PF04792 V antigen (LcrV) protein K08M3_RS08615 PF09621 Type III secretion system regulator (LcrR) K08M3_RS08620 PF00771 FHIPEP family K08M3_RS08640 PF09059 TyeA K08M3_RS08650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M3_RS08650 PF02874 ATP synthase alpha/beta family, beta-barrel domain K08M3_RS08650 PF18269 T3SS EscN ATPase C-terminal domain K08M3_RS08665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K08M3_RS08670 PF00813 FliP family K08M3_RS08675 PF01313 Bacterial export proteins, family 3 K08M3_RS08680 PF01311 Bacterial export proteins, family 1 K08M3_RS08685 PF01312 FlhB HrpN YscU SpaS Family K08M3_RS08690 PF12852 Cupin K08M3_RS08690 PF12833 Helix-turn-helix domain K08M3_RS08720 PF02661 Fic/DOC family K08M3_RS08730 PF02108 Flagellar assembly protein FliH K08M3_RS08740 PF01514 Secretory protein of YscJ/FliF family K08M3_RS08745 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI K08M3_RS08755 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) K08M3_RS08760 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF K08M3_RS08770 PF16697 Inner membrane component of T3SS, cytoplasmic domain K08M3_RS08770 PF16693 Inner membrane component of T3SS, periplasmic domain K08M3_RS08775 PF00263 Bacterial type II and III secretion system protein K08M3_RS08775 PF03958 Bacterial type II/III secretion system short domain K08M3_RS08790 PF12833 Helix-turn-helix domain K08M3_RS08810 PF00171 Aldehyde dehydrogenase family K08M3_RS08815 PF02954 Bacterial regulatory protein, Fis family K08M3_RS08815 PF00158 Sigma-54 interaction domain K08M3_RS08815 PF01590 GAF domain K08M3_RS08830 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K08M3_RS08830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M3_RS08835 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K08M3_RS08840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain K08M3_RS08840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain K08M3_RS08845 PF12833 Helix-turn-helix domain K08M3_RS08845 PF02311 AraC-like ligand binding domain K08M3_RS08850 PF00593 TonB dependent receptor K08M3_RS08850 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS08855 PF12431 Transcriptional regulator K08M3_RS08855 PF00072 Response regulator receiver domain K08M3_RS08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS08860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain K08M3_RS08860 PF00989 PAS fold K08M3_RS08860 PF17203 Single cache domain 3 K08M3_RS08875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS08890 PF03466 LysR substrate binding domain K08M3_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS08905 PF08543 Phosphomethylpyrimidine kinase K08M3_RS08910 PF00155 Aminotransferase class I and II K08M3_RS08915 PF06826 Predicted Permease Membrane Region K08M3_RS08915 PF02080 TrkA-C domain K08M3_RS08925 PF13533 Biotin-lipoyl like K08M3_RS08940 PF00135 Carboxylesterase family K08M3_RS08950 PF01103 Surface antigen K08M3_RS08950 PF17243 POTRA domain TamA domain 1 K08M3_RS08955 PF11008 Protein of unknown function (DUF2846) K08M3_RS08960 PF01810 LysE type translocator K08M3_RS08965 PF01810 LysE type translocator K08M3_RS08970 PF07237 Protein of unknown function (DUF1428) K08M3_RS08990 PF02272 DHHA1 domain K08M3_RS08990 PF01411 tRNA synthetases class II (A) K08M3_RS08990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M3_RS08995 PF13302 Acetyltransferase (GNAT) domain K08M3_RS09000 PF12464 Maltose acetyltransferase K08M3_RS09000 PF14602 Hexapeptide repeat of succinyl-transferase K08M3_RS09050 PF00665 Integrase core domain K08M3_RS09050 PF13276 HTH-like domain K08M3_RS09050 PF13333 Integrase core domain K08M3_RS09080 PF04463 Protein of unknown function (DUF523) K08M3_RS09090 PF00583 Acetyltransferase (GNAT) family K08M3_RS09165 PF13333 Integrase core domain K08M3_RS09165 PF13276 HTH-like domain K08M3_RS09165 PF00665 Integrase core domain K08M3_RS09200 PF01844 HNH endonuclease K08M3_RS09290 PF00589 Phage integrase family K08M3_RS09290 PF13495 Phage integrase, N-terminal SAM-like domain K08M3_RS09300 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS09305 PF00665 Integrase core domain K08M3_RS09315 PF06826 Predicted Permease Membrane Region K08M3_RS09320 PF00282 Pyridoxal-dependent decarboxylase conserved domain K08M3_RS09325 PF01527 Transposase K08M3_RS09330 PF01544 CorA-like Mg2+ transporter protein K08M3_RS09340 PF01699 Sodium/calcium exchanger protein K08M3_RS09345 PF01699 Sodium/calcium exchanger protein K08M3_RS09360 PF04632 Fusaric acid resistance protein family K08M3_RS09365 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS09365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS09375 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family K08M3_RS09385 PF06826 Predicted Permease Membrane Region K08M3_RS09385 PF02080 TrkA-C domain K08M3_RS09390 PF00999 Sodium/hydrogen exchanger family K08M3_RS09415 PF04976 DMSO reductase anchor subunit (DmsC) K08M3_RS09420 PF12800 4Fe-4S binding domain K08M3_RS09420 PF13247 4Fe-4S dicluster domain K08M3_RS09425 PF01568 Molydopterin dinucleotide binding domain K08M3_RS09425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS09425 PF00384 Molybdopterin oxidoreductase K08M3_RS09430 PF02613 Nitrate reductase delta subunit K08M3_RS09435 PF12838 4Fe-4S dicluster domain K08M3_RS09435 PF00037 4Fe-4S binding domain K08M3_RS09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS09440 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS09440 PF09308 LuxQ, periplasmic K08M3_RS09440 PF00072 Response regulator receiver domain K08M3_RS09515 PF07274 Protein of unknown function (DUF1440) K08M3_RS09520 PF00563 EAL domain K08M3_RS09520 PF08495 FIST N domain K08M3_RS09520 PF10442 FIST C domain K08M3_RS09520 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS09525 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS09525 PF00072 Response regulator receiver domain K08M3_RS09550 PF00691 OmpA family K08M3_RS09550 PF01389 OmpA-like transmembrane domain K08M3_RS09595 PF14310 Fibronectin type III-like domain K08M3_RS09595 PF01915 Glycosyl hydrolase family 3 C-terminal domain K08M3_RS09595 PF00933 Glycosyl hydrolase family 3 N terminal domain K08M3_RS09605 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS09605 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS09605 PF01627 Hpt domain K08M3_RS09605 PF00072 Response regulator receiver domain K08M3_RS09605 PF00989 PAS fold K08M3_RS09610 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS09610 PF00072 Response regulator receiver domain K08M3_RS09625 PF00816 H-NS histone family K08M3_RS09685 PF00857 Isochorismatase family K08M3_RS09795 PF09905 DNA-binding protein VF530 K08M3_RS09830 PF00589 Phage integrase family K08M3_RS09830 PF13495 Phage integrase, N-terminal SAM-like domain K08M3_RS09845 PF13302 Acetyltransferase (GNAT) domain K08M3_RS09850 PF18024 Helix-turn-helix domain K08M3_RS09850 PF00158 Sigma-54 interaction domain K08M3_RS09855 PF05128 Domain of unknown function (DUF697) K08M3_RS09860 PF04317 YcjX-like family, DUF463 K08M3_RS09875 PF04715 Anthranilate synthase component I, N terminal region K08M3_RS09875 PF00425 chorismate binding enzyme K08M3_RS09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS09880 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS09880 PF09308 LuxQ, periplasmic K08M3_RS09880 PF00072 Response regulator receiver domain K08M3_RS09890 PF00293 NUDIX domain K08M3_RS09895 PF03222 Tryptophan/tyrosine permease family K08M3_RS09900 PF03315 Serine dehydratase beta chain K08M3_RS09900 PF03313 Serine dehydratase alpha chain K08M3_RS09905 PF04940 Sensors of blue-light using FAD K08M3_RS09905 PF00563 EAL domain K08M3_RS09915 PF01242 6-pyruvoyl tetrahydropterin synthase K08M3_RS09920 PF00672 HAMP domain K08M3_RS09920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS09920 PF17200 Single Cache domain 2 K08M3_RS09925 PF01336 OB-fold nucleic acid binding domain K08M3_RS09925 PF00152 tRNA synthetases class II (D, K and N) K08M3_RS09935 PF00155 Aminotransferase class I and II K08M3_RS09935 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS09950 PF00155 Aminotransferase class I and II K08M3_RS09970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS09970 PF00672 HAMP domain K08M3_RS09975 PF02028 BCCT, betaine/carnitine/choline family transporter K08M3_RS09985 PF00072 Response regulator receiver domain K08M3_RS09985 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS09990 PF07730 Histidine kinase K08M3_RS09990 PF17200 Single Cache domain 2 K08M3_RS09995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K08M3_RS10005 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M3_RS10020 PF00753 Metallo-beta-lactamase superfamily K08M3_RS10025 PF05951 Bacterial protein of unknown function (DUF882) K08M3_RS10030 PF01471 Putative peptidoglycan binding domain K08M3_RS10030 PF03734 L,D-transpeptidase catalytic domain K08M3_RS10055 PF00925 GTP cyclohydrolase II K08M3_RS10065 PF03918 Cytochrome C biogenesis protein K08M3_RS10070 PF08534 Redoxin K08M3_RS10075 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K08M3_RS10075 PF01578 Cytochrome C assembly protein K08M3_RS10080 PF03916 Polysulphide reductase, NrfD K08M3_RS10085 PF13247 4Fe-4S dicluster domain K08M3_RS10095 PF02335 Cytochrome c552 K08M3_RS10110 PF00521 DNA gyrase/topoisomerase IV, subunit A K08M3_RS10110 PF03989 DNA gyrase C-terminal domain, beta-propeller K08M3_RS10120 PF02867 Ribonucleotide reductase, barrel domain K08M3_RS10120 PF03477 ATP cone domain K08M3_RS10120 PF00317 Ribonucleotide reductase, all-alpha domain K08M3_RS10125 PF00268 Ribonucleotide reductase, small chain K08M3_RS10135 PF00994 Probable molybdopterin binding domain K08M3_RS10150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K08M3_RS10155 PF16653 Saccharopine dehydrogenase C-terminal domain K08M3_RS10155 PF03435 Saccharopine dehydrogenase NADP binding domain K08M3_RS10160 PF00202 Aminotransferase class-III K08M3_RS10190 PF01066 CDP-alcohol phosphatidyltransferase K08M3_RS10195 PF08459 UvrC Helix-hairpin-helix N-terminal K08M3_RS10195 PF02151 UvrB/uvrC motif K08M3_RS10195 PF01541 GIY-YIG catalytic domain K08M3_RS10200 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS10200 PF00072 Response regulator receiver domain K08M3_RS10205 PF00136 DNA polymerase family B K08M3_RS10205 PF03104 DNA polymerase family B, exonuclease domain K08M3_RS10215 PF08207 Elongation factor P (EF-P) KOW-like domain K08M3_RS10215 PF01132 Elongation factor P (EF-P) OB domain K08M3_RS10215 PF09285 Elongation factor P, C-terminal K08M3_RS10220 PF04269 Protein of unknown function, DUF440 K08M3_RS10225 PF00849 RNA pseudouridylate synthase K08M3_RS10225 PF01479 S4 domain K08M3_RS10235 PF01300 Telomere recombination K08M3_RS10240 PF02811 PHP domain K08M3_RS10245 PF08056 Tryptophan operon leader peptide K08M3_RS10250 PF04715 Anthranilate synthase component I, N terminal region K08M3_RS10250 PF00425 chorismate binding enzyme K08M3_RS10255 PF00117 Glutamine amidotransferase class-I K08M3_RS10260 PF00591 Glycosyl transferase family, a/b domain K08M3_RS10260 PF02885 Glycosyl transferase family, helical bundle domain K08M3_RS10265 PF00218 Indole-3-glycerol phosphate synthase K08M3_RS10265 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K08M3_RS10270 PF00291 Pyridoxal-phosphate dependent enzyme K08M3_RS10275 PF00290 Tryptophan synthase alpha chain K08M3_RS10280 PF00027 Cyclic nucleotide-binding domain K08M3_RS10280 PF13545 Crp-like helix-turn-helix domain K08M3_RS10285 PF13193 AMP-binding enzyme C-terminal domain K08M3_RS10285 PF00501 AMP-binding enzyme K08M3_RS10295 PF00375 Sodium:dicarboxylate symporter family K08M3_RS10300 PF17327 Acyl homoserine lactone synthase K08M3_RS10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS10305 PF00072 Response regulator receiver domain K08M3_RS10315 PF04279 Intracellular septation protein A K08M3_RS10320 PF03061 Thioesterase superfamily K08M3_RS10325 PF03795 YCII-related domain K08M3_RS10335 PF01717 Cobalamin-independent synthase, Catalytic domain K08M3_RS10335 PF08267 Cobalamin-independent synthase, N-terminal domain K08M3_RS10340 PF03466 LysR substrate binding domain K08M3_RS10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS10355 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS10355 PF00563 EAL domain K08M3_RS10355 PF08448 PAS fold K08M3_RS10355 PF08447 PAS fold K08M3_RS10360 PF04055 Radical SAM superfamily K08M3_RS10360 PF08497 Radical SAM N-terminal K08M3_RS10360 PF11842 Domain of unknown function (DUF3362) K08M3_RS10380 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase K08M3_RS10385 PF00535 Glycosyl transferase family 2 K08M3_RS10390 PF00072 Response regulator receiver domain K08M3_RS10390 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS10395 PF00672 HAMP domain K08M3_RS10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS10395 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS10410 PF03466 LysR substrate binding domain K08M3_RS10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS10415 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS10415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS10425 PF01717 Cobalamin-independent synthase, Catalytic domain K08M3_RS10425 PF08267 Cobalamin-independent synthase, N-terminal domain K08M3_RS10445 PF12704 MacB-like periplasmic core domain K08M3_RS10445 PF02687 FtsX-like permease family K08M3_RS10445 PF00005 ABC transporter K08M3_RS10450 PF12704 MacB-like periplasmic core domain K08M3_RS10450 PF00005 ABC transporter K08M3_RS10450 PF02687 FtsX-like permease family K08M3_RS10455 PF00005 ABC transporter K08M3_RS10455 PF02687 FtsX-like permease family K08M3_RS10455 PF12704 MacB-like periplasmic core domain K08M3_RS10465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS10480 PF01938 TRAM domain K08M3_RS10480 PF05958 tRNA (Uracil-5-)-methyltransferase K08M3_RS10490 PF00085 Thioredoxin K08M3_RS10495 PF11412 Disulphide bond corrector protein DsbC K08M3_RS10495 PF13098 Thioredoxin-like domain K08M3_RS10495 PF02683 Cytochrome C biogenesis protein transmembrane region K08M3_RS10505 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS10505 PF00072 Response regulator receiver domain K08M3_RS10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS10510 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS10515 PF13247 4Fe-4S dicluster domain K08M3_RS10520 PF03916 Polysulphide reductase, NrfD K08M3_RS10525 PF01568 Molydopterin dinucleotide binding domain K08M3_RS10525 PF00384 Molybdopterin oxidoreductase K08M3_RS10525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS10530 PF00034 Cytochrome c K08M3_RS10535 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M3_RS10540 PF04403 Paraquat-inducible protein A K08M3_RS10545 PF02470 MlaD protein K08M3_RS10565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS10570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K08M3_RS10575 PF18073 Rubredoxin metal binding domain K08M3_RS10580 PF06305 Lipopolysaccharide assembly protein A domain K08M3_RS10585 PF00216 Bacterial DNA-binding protein K08M3_RS10590 PF00575 S1 RNA binding domain K08M3_RS10595 PF02224 Cytidylate kinase K08M3_RS10600 PF01343 Peptidase family S49 K08M3_RS10600 PF08496 Peptidase family S49 N-terminal K08M3_RS10605 PF00106 short chain dehydrogenase K08M3_RS10620 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M3_RS10620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M3_RS10620 PF14579 Helix-hairpin-helix motif K08M3_RS10620 PF02811 PHP domain K08M3_RS10620 PF01336 OB-fold nucleic acid binding domain K08M3_RS10625 PF01584 CheW-like domain K08M3_RS10625 PF00072 Response regulator receiver domain K08M3_RS10630 PF00480 ROK family K08M3_RS10635 PF02887 Pyruvate kinase, alpha/beta domain K08M3_RS10635 PF00224 Pyruvate kinase, barrel domain K08M3_RS10640 PF01734 Patatin-like phospholipase K08M3_RS10655 PF00209 Sodium:neurotransmitter symporter family K08M3_RS10670 PF02378 Phosphotransferase system, EIIC K08M3_RS10670 PF00367 phosphotransferase system, EIIB K08M3_RS10675 PF01026 TatD related DNase K08M3_RS10680 PF09115 DNA polymerase III, delta subunit, C terminal K08M3_RS10685 PF02223 Thymidylate kinase K08M3_RS10690 PF02618 YceG-like family K08M3_RS10695 PF01063 Amino-transferase class IV K08M3_RS10700 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M3_RS10700 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M3_RS10705 PF00550 Phosphopantetheine attachment site K08M3_RS10715 PF00698 Acyl transferase domain K08M3_RS10720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K08M3_RS10720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K08M3_RS10725 PF02504 Fatty acid synthesis protein K08M3_RS10730 PF01783 Ribosomal L32p protein family K08M3_RS10735 PF02620 Large ribosomal RNA subunit accumulation protein YceD K08M3_RS10740 PF02545 Maf-like protein K08M3_RS10745 PF00849 RNA pseudouridylate synthase K08M3_RS10745 PF01479 S4 domain K08M3_RS10755 PF00575 S1 RNA binding domain K08M3_RS10755 PF10150 Ribonuclease E/G family K08M3_RS10755 PF12111 Polyribonucleotide phosphorylase C terminal K08M3_RS10765 PF01740 STAS domain K08M3_RS10765 PF00916 Sulfate permease family K08M3_RS10770 PF01451 Low molecular weight phosphotyrosine protein phosphatase K08M3_RS10775 PF12557 Cob(I)alamin adenosyltransferase N terminal K08M3_RS10775 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K08M3_RS10785 PF00485 Phosphoribulokinase / Uridine kinase family K08M3_RS10790 PF10609 NUBPL iron-transfer P-loop NTPase K08M3_RS10795 PF09334 tRNA synthetases class I (M) K08M3_RS10795 PF01588 Putative tRNA binding domain K08M3_RS10815 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS10815 PF07840 FadR C-terminal domain K08M3_RS10820 PF06450 Bacterial Na+/H+ antiporter B (NhaB) K08M3_RS10825 PF02600 Disulfide bond formation protein DsbB K08M3_RS10830 PF02810 SEC-C motif K08M3_RS10830 PF03695 Uncharacterised protein family (UPF0149) K08M3_RS10835 PF01207 Dihydrouridine synthase (Dus) K08M3_RS10840 PF17158 Membrane-associated sensor, integral membrane domain K08M3_RS10840 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS10845 PF00128 Alpha amylase, catalytic domain K08M3_RS10845 PF02903 Alpha amylase, N-terminal ig-like domain K08M3_RS10850 PF00005 ABC transporter K08M3_RS10855 PF02653 Branched-chain amino acid transport system / permease component K08M3_RS10865 PF04217 Protein of unknown function, DUF412 K08M3_RS10870 PF00871 Acetokinase family K08M3_RS10875 PF01515 Phosphate acetyl/butaryl transferase K08M3_RS10875 PF07085 DRTGG domain K08M3_RS10885 PF13409 Glutathione S-transferase, N-terminal domain K08M3_RS10890 PF00005 ABC transporter K08M3_RS10890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS10895 PF00005 ABC transporter K08M3_RS10895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS10900 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M3_RS10900 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS10905 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS10910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS10915 PF02391 MoaE protein K08M3_RS10920 PF02597 ThiS family K08M3_RS10925 PF01967 MoaC family K08M3_RS10930 PF00994 Probable molybdopterin binding domain K08M3_RS10935 PF04055 Radical SAM superfamily K08M3_RS10935 PF06463 Molybdenum Cofactor Synthesis C K08M3_RS10940 PF01933 Uncharacterised protein family UPF0052 K08M3_RS10945 PF01627 Hpt domain K08M3_RS10950 PF02954 Bacterial regulatory protein, Fis family K08M3_RS10950 PF00072 Response regulator receiver domain K08M3_RS10950 PF00158 Sigma-54 interaction domain K08M3_RS10955 PF04851 Type III restriction enzyme, res subunit K08M3_RS10955 PF02151 UvrB/uvrC motif K08M3_RS10955 PF12344 Ultra-violet resistance protein B K08M3_RS10955 PF00271 Helicase conserved C-terminal domain K08M3_RS10955 PF17757 UvrB interaction domain K08M3_RS10965 PF01228 Glycine radical K08M3_RS10965 PF02901 Pyruvate formate lyase-like K08M3_RS10970 PF02508 Rnf-Nqr subunit, membrane protein K08M3_RS10975 PF04060 Putative Fe-S cluster K08M3_RS10980 PF13375 RnfC Barrel sandwich hybrid domain K08M3_RS10980 PF10531 SLBB domain K08M3_RS10980 PF12838 4Fe-4S dicluster domain K08M3_RS10980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit K08M3_RS10985 PF03116 NQR2, RnfD, RnfE family K08M3_RS10990 PF04205 FMN-binding domain K08M3_RS10995 PF02508 Rnf-Nqr subunit, membrane protein K08M3_RS11000 PF00730 HhH-GPD superfamily base excision DNA repair protein K08M3_RS11000 PF00633 Helix-hairpin-helix motif K08M3_RS11000 PF10576 Iron-sulfur binding domain of endonuclease III K08M3_RS11005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M3_RS11010 PF10952 Protein of unknown function (DUF2753) K08M3_RS11015 PF18393 MotY N-terminal domain K08M3_RS11015 PF00691 OmpA family K08M3_RS11020 PF00929 Exonuclease K08M3_RS11025 PF13726 Na+-H+ antiporter family K08M3_RS11025 PF03553 Na+/H+ antiporter family K08M3_RS11045 PF00462 Glutaredoxin K08M3_RS11050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K08M3_RS11050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K08M3_RS11070 PF00171 Aldehyde dehydrogenase family K08M3_RS11070 PF00465 Iron-containing alcohol dehydrogenase K08M3_RS11075 PF01914 MarC family integral membrane protein K08M3_RS11080 PF00027 Cyclic nucleotide-binding domain K08M3_RS11080 PF00520 Ion transport protein K08M3_RS11085 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M3_RS11085 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M3_RS11090 PF03553 Na+/H+ antiporter family K08M3_RS11105 PF04245 37-kD nucleoid-associated bacterial protein K08M3_RS11110 PF07208 Protein of unknown function (DUF1414) K08M3_RS11115 PF00884 Sulfatase K08M3_RS11115 PF11893 Domain of unknown function (DUF3413) K08M3_RS11125 PF00850 Histone deacetylase domain K08M3_RS11130 PF00106 short chain dehydrogenase K08M3_RS11140 PF01131 DNA topoisomerase K08M3_RS11140 PF01751 Toprim domain K08M3_RS11145 PF00881 Nitroreductase family K08M3_RS11155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M3_RS11155 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS11160 PF01343 Peptidase family S49 K08M3_RS11165 PF17763 Glutaminase/Asparaginase C-terminal domain K08M3_RS11165 PF00710 Asparaginase, N-terminal K08M3_RS11170 PF07023 Protein of unknown function (DUF1315) K08M3_RS11180 PF01641 SelR domain K08M3_RS11185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M3_RS11185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS11190 PF01263 Aldose 1-epimerase K08M3_RS11195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS11195 PF13426 PAS domain K08M3_RS11195 PF08447 PAS fold K08M3_RS11200 PF13847 Methyltransferase domain K08M3_RS11215 PF00245 Alkaline phosphatase K08M3_RS11225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M3_RS11230 PF03992 Antibiotic biosynthesis monooxygenase K08M3_RS11235 PF05552 Conserved TM helix K08M3_RS11235 PF00924 Mechanosensitive ion channel K08M3_RS11240 PF03692 Putative zinc- or iron-chelating domain K08M3_RS11245 PF04226 Transglycosylase associated protein K08M3_RS11250 PF03692 Putative zinc- or iron-chelating domain K08M3_RS11255 PF00230 Major intrinsic protein K08M3_RS11260 PF13662 Toprim domain K08M3_RS11260 PF02132 RecR protein K08M3_RS11265 PF02575 YbaB/EbfC DNA-binding family K08M3_RS11270 PF12170 DNA polymerase III tau subunit V interacting with alpha K08M3_RS11270 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding K08M3_RS11270 PF12169 DNA polymerase III subunits gamma and tau domain III K08M3_RS11275 PF00156 Phosphoribosyl transferase domain K08M3_RS11280 PF04304 Protein of unknown function (DUF454) K08M3_RS11290 PF00072 Response regulator receiver domain K08M3_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS11295 PF03466 LysR substrate binding domain K08M3_RS11300 PF00156 Phosphoribosyl transferase domain K08M3_RS11305 PF02674 Colicin V production protein K08M3_RS11310 PF05036 Sporulation related domain K08M3_RS11315 PF08245 Mur ligase middle domain K08M3_RS11315 PF02875 Mur ligase family, glutamate ligase domain K08M3_RS11320 PF17848 Acetyl-coA carboxylase zinc finger domain K08M3_RS11320 PF01039 Carboxyl transferase domain K08M3_RS11330 PF01416 tRNA pseudouridine synthase K08M3_RS11340 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M3_RS11340 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M3_RS11345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M3_RS11345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M3_RS11345 PF11890 Domain of unknown function (DUF3410) K08M3_RS11355 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M3_RS11355 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M3_RS11360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K08M3_RS11360 PF01266 FAD dependent oxidoreductase K08M3_RS11365 PF03358 NADPH-dependent FMN reductase K08M3_RS11375 PF08891 YfcL protein K08M3_RS11380 PF04315 Elongation factor P hydroxylase K08M3_RS11390 PF03458 UPF0126 domain K08M3_RS11395 PF01264 Chorismate synthase K08M3_RS11400 PF05175 Methyltransferase small domain K08M3_RS11405 PF01713 Smr domain K08M3_RS11410 PF00300 Histidine phosphatase superfamily (branch 1) K08M3_RS11415 PF05193 Peptidase M16 inactive domain K08M3_RS11415 PF00675 Insulinase (Peptidase family M16) K08M3_RS11415 PF16187 Middle or third domain of peptidase_M16 K08M3_RS11425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K08M3_RS11425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K08M3_RS11425 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS11430 PF00108 Thiolase, N-terminal domain K08M3_RS11430 PF02803 Thiolase, C-terminal domain K08M3_RS11440 PF04542 Sigma-70 region 2 K08M3_RS11440 PF08281 Sigma-70, region 4 K08M3_RS11450 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M3_RS11455 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M3_RS11465 PF04333 MlaA lipoprotein K08M3_RS11470 PF03918 Cytochrome C biogenesis protein K08M3_RS11475 PF03918 Cytochrome C biogenesis protein K08M3_RS11480 PF08534 Redoxin K08M3_RS11485 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K08M3_RS11485 PF01578 Cytochrome C assembly protein K08M3_RS11490 PF03100 CcmE K08M3_RS11495 PF04995 Heme exporter protein D (CcmD) K08M3_RS11500 PF01578 Cytochrome C assembly protein K08M3_RS11505 PF03379 CcmB protein K08M3_RS11510 PF00005 ABC transporter K08M3_RS11520 PF01584 CheW-like domain K08M3_RS11530 PF13614 AAA domain K08M3_RS11535 PF01339 CheB methylesterase K08M3_RS11535 PF00072 Response regulator receiver domain K08M3_RS11540 PF01584 CheW-like domain K08M3_RS11540 PF02895 Signal transducing histidine kinase, homodimeric domain K08M3_RS11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS11540 PF01627 Hpt domain K08M3_RS11540 PF00072 Response regulator receiver domain K08M3_RS11545 PF04344 Chemotaxis phosphatase, CheZ K08M3_RS11550 PF00072 Response regulator receiver domain K08M3_RS11555 PF04545 Sigma-70, region 4 K08M3_RS11555 PF04539 Sigma-70 region 3 K08M3_RS11555 PF04542 Sigma-70 region 2 K08M3_RS11560 PF10609 NUBPL iron-transfer P-loop NTPase K08M3_RS11565 PF00448 SRP54-type protein, GTPase domain K08M3_RS11570 PF00771 FHIPEP family K08M3_RS11575 PF01312 FlhB HrpN YscU SpaS Family K08M3_RS11580 PF01311 Bacterial export proteins, family 1 K08M3_RS11585 PF01313 Bacterial export proteins, family 3 K08M3_RS11590 PF00813 FliP family K08M3_RS11595 PF04347 Flagellar biosynthesis protein, FliO K08M3_RS11600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K08M3_RS11605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K08M3_RS11605 PF02154 Flagellar motor switch protein FliM K08M3_RS11630 PF18269 T3SS EscN ATPase C-terminal domain K08M3_RS11630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M3_RS11640 PF01706 FliG C-terminal domain K08M3_RS11640 PF14841 FliG middle domain K08M3_RS11640 PF14842 FliG N-terminal domain K08M3_RS11645 PF01514 Secretory protein of YscJ/FliF family K08M3_RS11645 PF08345 Flagellar M-ring protein C-terminal K08M3_RS11650 PF02049 Flagellar hook-basal body complex protein FliE K08M3_RS11655 PF00158 Sigma-54 interaction domain K08M3_RS11655 PF00072 Response regulator receiver domain K08M3_RS11655 PF02954 Bacterial regulatory protein, Fis family K08M3_RS11660 PF13188 PAS domain K08M3_RS11660 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS11665 PF06490 Flagellar regulatory protein FleQ K08M3_RS11665 PF02954 Bacterial regulatory protein, Fis family K08M3_RS11665 PF00158 Sigma-54 interaction domain K08M3_RS11670 PF02561 Flagellar protein FliS K08M3_RS11680 PF07196 Flagellin hook IN motif K08M3_RS11680 PF07195 Flagellar hook-associated protein 2 C-terminus K08M3_RS11680 PF02465 Flagellar hook-associated protein 2 N-terminus K08M3_RS11685 PF03646 FlaG protein K08M3_RS11690 PF00700 Bacterial flagellin C-terminal helical region K08M3_RS11690 PF07196 Flagellin hook IN motif K08M3_RS11690 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS11695 PF00700 Bacterial flagellin C-terminal helical region K08M3_RS11695 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS11695 PF07196 Flagellin hook IN motif K08M3_RS11705 PF00700 Bacterial flagellin C-terminal helical region K08M3_RS11705 PF07196 Flagellin hook IN motif K08M3_RS11705 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS11710 PF04261 Dyp-type peroxidase family K08M3_RS11715 PF11143 Protein of unknown function (DUF2919) K08M3_RS11735 PF03960 ArsC family K08M3_RS11740 PF01546 Peptidase family M20/M25/M40 K08M3_RS11740 PF07687 Peptidase dimerisation domain K08M3_RS11755 PF06804 NlpB/DapX lipoprotein K08M3_RS11760 PF00701 Dihydrodipicolinate synthetase family K08M3_RS11770 PF00578 AhpC/TSA family K08M3_RS11795 PF00578 AhpC/TSA family K08M3_RS11810 PF02910 Fumarate reductase flavoprotein C-term K08M3_RS11810 PF00890 FAD binding domain K08M3_RS11815 PF00664 ABC transporter transmembrane region K08M3_RS11815 PF00005 ABC transporter K08M3_RS11815 PF03412 Peptidase C39 family K08M3_RS11820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS11820 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS11840 PF00535 Glycosyl transferase family 2 K08M3_RS11865 PF02954 Bacterial regulatory protein, Fis family K08M3_RS11875 PF13361 UvrD-like helicase C-terminal domain K08M3_RS11875 PF00580 UvrD/REP helicase N-terminal domain K08M3_RS11890 PF09308 LuxQ, periplasmic K08M3_RS11890 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS11890 PF00072 Response regulator receiver domain K08M3_RS11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS11900 PF00313 'Cold-shock' DNA-binding domain K08M3_RS11920 PF00313 'Cold-shock' DNA-binding domain K08M3_RS11925 PF00589 Phage integrase family K08M3_RS11925 PF02899 Phage integrase, N-terminal SAM-like domain K08M3_RS11930 PF01145 SPFH domain / Band 7 family K08M3_RS11930 PF12221 Bacterial membrane protein N terminal K08M3_RS11940 PF06965 Na+/H+ antiporter 1 K08M3_RS11945 PF00330 Aconitase family (aconitate hydratase) K08M3_RS11945 PF00694 Aconitase C-terminal domain K08M3_RS11950 PF00313 'Cold-shock' DNA-binding domain K08M3_RS11970 PF00578 AhpC/TSA family K08M3_RS11975 PF01594 AI-2E family transporter K08M3_RS11985 PF13181 Tetratricopeptide repeat K08M3_RS11985 PF01435 Peptidase family M48 K08M3_RS11990 PF03960 ArsC family K08M3_RS11995 PF03358 NADPH-dependent FMN reductase K08M3_RS12010 PF00860 Permease family K08M3_RS12020 PF00586 AIR synthase related protein, N-terminal domain K08M3_RS12020 PF02769 AIR synthase related protein, C-terminal domain K08M3_RS12025 PF00551 Formyl transferase K08M3_RS12030 PF13230 Glutamine amidotransferases class-II K08M3_RS12035 PF13580 SIS domain K08M3_RS12040 PF02770 Acyl-CoA dehydrogenase, middle domain K08M3_RS12040 PF09317 Domain of unknown function (DUF1974) K08M3_RS12040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M3_RS12040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M3_RS12045 PF00916 Sulfate permease family K08M3_RS12045 PF01740 STAS domain K08M3_RS12070 PF00929 Exonuclease K08M3_RS12075 PF00075 RNase H K08M3_RS12080 PF08241 Methyltransferase domain K08M3_RS12085 PF16123 Hydroxyacylglutathione hydrolase C-terminus K08M3_RS12085 PF00753 Metallo-beta-lactamase superfamily K08M3_RS12090 PF01464 Transglycosylase SLT domain K08M3_RS12090 PF01476 LysM domain K08M3_RS12100 PF03372 Endonuclease/Exonuclease/phosphatase family K08M3_RS12105 PF00543 Nitrogen regulatory protein P-II K08M3_RS12110 PF00034 Cytochrome c K08M3_RS12115 PF11734 TilS substrate C-terminal domain K08M3_RS12115 PF09179 TilS substrate binding domain K08M3_RS12115 PF01171 PP-loop family K08M3_RS12120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K08M3_RS12125 PF02811 PHP domain K08M3_RS12125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M3_RS12125 PF14579 Helix-hairpin-helix motif K08M3_RS12125 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M3_RS12125 PF01336 OB-fold nucleic acid binding domain K08M3_RS12130 PF01351 Ribonuclease HII K08M3_RS12135 PF02684 Lipid-A-disaccharide synthetase K08M3_RS12140 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS12140 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K08M3_RS12145 PF07977 FabA-like domain K08M3_RS12150 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS12150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K08M3_RS12155 PF03938 Outer membrane protein (OmpH-like) K08M3_RS12160 PF07244 Surface antigen variable number repeat K08M3_RS12160 PF01103 Surface antigen K08M3_RS12165 PF02163 Peptidase family M50 K08M3_RS12165 PF17820 PDZ domain K08M3_RS12170 PF13288 DXP reductoisomerase C-terminal domain K08M3_RS12170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain K08M3_RS12170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase K08M3_RS12180 PF01255 Putative undecaprenyl diphosphate synthase K08M3_RS12185 PF01765 Ribosome recycling factor K08M3_RS12190 PF00696 Amino acid kinase family K08M3_RS12195 PF00889 Elongation factor TS K08M3_RS12200 PF00318 Ribosomal protein S2 K08M3_RS12205 PF00557 Metallopeptidase family M24 K08M3_RS12210 PF01966 HD domain K08M3_RS12210 PF01909 Nucleotidyltransferase domain K08M3_RS12210 PF08335 GlnD PII-uridylyltransferase K08M3_RS12210 PF01842 ACT domain K08M3_RS12215 PF11944 Protein of unknown function (DUF3461) K08M3_RS12220 PF00849 RNA pseudouridylate synthase K08M3_RS12225 PF04287 tRNA pseudouridine synthase C K08M3_RS12255 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 K08M3_RS12260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K08M3_RS12260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K08M3_RS12265 PF01370 NAD dependent epimerase/dehydratase family K08M3_RS12290 PF03806 AbgT putative transporter family K08M3_RS12295 PF00444 Ribosomal protein L36 K08M3_RS12300 PF01197 Ribosomal protein L31 K08M3_RS12305 PF18389 TrmO C-terminal domain K08M3_RS12305 PF01980 tRNA-methyltransferase O K08M3_RS12310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M3_RS12310 PF04073 Aminoacyl-tRNA editing domain K08M3_RS12310 PF03129 Anticodon binding domain K08M3_RS12320 PF06786 Uncharacterised protein family (UPF0253) K08M3_RS12330 PF00209 Sodium:neurotransmitter symporter family K08M3_RS12335 PF00704 Glycosyl hydrolases family 18 K08M3_RS12335 PF06483 Chitinase C K08M3_RS12345 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M3_RS12345 PF03449 Transcription elongation factor, N-terminal K08M3_RS12350 PF09382 RQC domain K08M3_RS12350 PF00270 DEAD/DEAH box helicase K08M3_RS12350 PF00271 Helicase conserved C-terminal domain K08M3_RS12350 PF00570 HRDC domain K08M3_RS12350 PF16124 RecQ zinc-binding K08M3_RS12375 PF00817 impB/mucB/samB family K08M3_RS12375 PF11799 impB/mucB/samB family C-terminal domain K08M3_RS12375 PF11798 IMS family HHH motif K08M3_RS12430 PF01734 Patatin-like phospholipase K08M3_RS12465 PF00916 Sulfate permease family K08M3_RS12465 PF01740 STAS domain K08M3_RS12470 PF00582 Universal stress protein family K08M3_RS12475 PF00958 GMP synthase C terminal domain K08M3_RS12475 PF00117 Glutamine amidotransferase class-I K08M3_RS12475 PF03352 Methyladenine glycosylase K08M3_RS12475 PF13302 Acetyltransferase (GNAT) domain K08M3_RS12475 PF13673 Acetyltransferase (GNAT) domain K08M3_RS12535 PF00817 impB/mucB/samB family K08M3_RS12535 PF11798 IMS family HHH motif K08M3_RS12535 PF11799 impB/mucB/samB family C-terminal domain K08M3_RS12545 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS12545 PF00072 Response regulator receiver domain K08M3_RS12555 PF02424 ApbE family K08M3_RS12560 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M3_RS12560 PF00970 Oxidoreductase FAD-binding domain K08M3_RS12560 PF00175 Oxidoreductase NAD-binding domain K08M3_RS12565 PF02508 Rnf-Nqr subunit, membrane protein K08M3_RS12570 PF02508 Rnf-Nqr subunit, membrane protein K08M3_RS12575 PF04205 FMN-binding domain K08M3_RS12580 PF03116 NQR2, RnfD, RnfE family K08M3_RS12585 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K08M3_RS12585 PF11973 NQRA C-terminal domain K08M3_RS12590 PF01722 BolA-like protein K08M3_RS12595 PF05175 Methyltransferase small domain K08M3_RS12600 PF03923 Uncharacterized lipoprotein K08M3_RS12600 PF08139 Prokaryotic membrane lipoprotein lipid attachment site K08M3_RS12605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M3_RS12610 PF07690 Major Facilitator Superfamily K08M3_RS12620 PF04545 Sigma-70, region 4 K08M3_RS12620 PF04542 Sigma-70 region 2 K08M3_RS12640 PF03502 Nucleoside-specific channel-forming protein, Tsx K08M3_RS12645 PF08546 Ketopantoate reductase PanE/ApbA C terminal K08M3_RS12645 PF02558 Ketopantoate reductase PanE/ApbA K08M3_RS12650 PF01965 DJ-1/PfpI family K08M3_RS12655 PF00266 Aminotransferase class-V K08M3_RS12660 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS12660 PF17158 Membrane-associated sensor, integral membrane domain K08M3_RS12665 PF02657 Fe-S metabolism associated domain K08M3_RS12670 PF00899 ThiF family K08M3_RS12675 PF03562 MltA specific insert domain K08M3_RS12675 PF06725 3D domain K08M3_RS12690 PF00696 Amino acid kinase family K08M3_RS12690 PF00583 Acetyltransferase (GNAT) family K08M3_RS12700 PF13538 UvrD-like helicase C-terminal domain K08M3_RS12705 PF12705 PD-(D/E)XK nuclease superfamily K08M3_RS12705 PF00580 UvrD/REP helicase N-terminal domain K08M3_RS12705 PF13361 UvrD-like helicase C-terminal domain K08M3_RS12715 PF17946 RecC C-terminal domain K08M3_RS12720 PF01119 DNA mismatch repair protein, C-terminal domain K08M3_RS12720 PF08676 MutL C terminal dimerisation domain K08M3_RS12750 PF00145 C-5 cytosine-specific DNA methylase K08M3_RS12755 PF00145 C-5 cytosine-specific DNA methylase K08M3_RS12760 PF11893 Domain of unknown function (DUF3413) K08M3_RS12760 PF00884 Sulfatase K08M3_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS12770 PF03466 LysR substrate binding domain K08M3_RS12775 PF07130 YebG protein K08M3_RS12790 PF14602 Hexapeptide repeat of succinyl-transferase K08M3_RS12790 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle K08M3_RS12795 PF03009 Glycerophosphoryl diester phosphodiesterase family K08M3_RS12800 PF07690 Major Facilitator Superfamily K08M3_RS12810 PF00230 Major intrinsic protein K08M3_RS12815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K08M3_RS12815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K08M3_RS12820 PF00455 DeoR C terminal sensor domain K08M3_RS12820 PF08220 DeoR-like helix-turn-helix domain K08M3_RS12825 PF16901 C-terminal domain of alpha-glycerophosphate oxidase K08M3_RS12825 PF01266 FAD dependent oxidoreductase K08M3_RS12830 PF01544 CorA-like Mg2+ transporter protein K08M3_RS12850 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS12855 PF03466 LysR substrate binding domain K08M3_RS12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS12865 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS12895 PF00501 AMP-binding enzyme K08M3_RS12905 PF03466 LysR substrate binding domain K08M3_RS12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS12910 PF00009 Elongation factor Tu GTP binding domain K08M3_RS12910 PF03144 Elongation factor Tu domain 2 K08M3_RS12910 PF14492 Elongation Factor G, domain II K08M3_RS12910 PF03764 Elongation factor G, domain IV K08M3_RS12910 PF00679 Elongation factor G C-terminus K08M3_RS12915 PF18073 Rubredoxin metal binding domain K08M3_RS12925 PF18429 Domain of unknown function (DUF5609) K08M3_RS12935 PF01048 Phosphorylase superfamily K08M3_RS12940 PF01676 Metalloenzyme superfamily K08M3_RS12945 PF00591 Glycosyl transferase family, a/b domain K08M3_RS12945 PF02885 Glycosyl transferase family, helical bundle domain K08M3_RS12945 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain K08M3_RS12950 PF01791 DeoC/LacD family aldolase K08M3_RS12955 PF01773 Na+ dependent nucleoside transporter N-terminus K08M3_RS12955 PF07662 Na+ dependent nucleoside transporter C-terminus K08M3_RS12955 PF07670 Nucleoside recognition K08M3_RS12960 PF01026 TatD related DNase K08M3_RS12970 PF00009 Elongation factor Tu GTP binding domain K08M3_RS12970 PF03144 Elongation factor Tu domain 2 K08M3_RS12970 PF16658 Class II release factor RF3, C-terminal domain K08M3_RS12990 PF13508 Acetyltransferase (GNAT) domain K08M3_RS12995 PF02036 SCP-2 sterol transfer family K08M3_RS13005 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS13005 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS13005 PF00563 EAL domain K08M3_RS13010 PF01136 Peptidase family U32 K08M3_RS13015 PF01136 Peptidase family U32 K08M3_RS13020 PF01554 MatE K08M3_RS13030 PF07719 Tetratricopeptide repeat K08M3_RS13030 PF13181 Tetratricopeptide repeat K08M3_RS13035 PF00575 S1 RNA binding domain K08M3_RS13035 PF03725 3' exoribonuclease family, domain 2 K08M3_RS13035 PF01138 3' exoribonuclease family, domain 1 K08M3_RS13035 PF00013 KH domain K08M3_RS13035 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain K08M3_RS13040 PF00312 Ribosomal protein S15 K08M3_RS13045 PF16198 tRNA pseudouridylate synthase B C-terminal domain K08M3_RS13045 PF09157 Pseudouridine synthase II TruB, C-terminal K08M3_RS13045 PF01509 TruB family pseudouridylate synthase (N terminal domain) K08M3_RS13050 PF02033 Ribosome-binding factor A K08M3_RS13055 PF04760 Translation initiation factor IF-2, N-terminal region K08M3_RS13055 PF00009 Elongation factor Tu GTP binding domain K08M3_RS13055 PF11987 Translation-initiation factor 2 K08M3_RS13055 PF08364 Bacterial translation initiation factor IF-2 associated region K08M3_RS13060 PF13184 NusA-like KH domain K08M3_RS13060 PF00575 S1 RNA binding domain K08M3_RS13060 PF08529 NusA N-terminal domain K08M3_RS13065 PF17384 RimP C-terminal SH3 domain K08M3_RS13065 PF02576 RimP N-terminal domain K08M3_RS13080 PF03840 Preprotein translocase SecG subunit K08M3_RS13090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M3_RS13090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M3_RS13090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M3_RS13090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M3_RS13095 PF00809 Pterin binding enzyme K08M3_RS13100 PF17862 AAA+ lid domain K08M3_RS13100 PF06480 FtsH Extracellular K08M3_RS13100 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS13100 PF01434 Peptidase family M41 K08M3_RS13105 PF01728 FtsJ-like methyltransferase K08M3_RS13110 PF01985 CRS1 / YhbY (CRM) domain K08M3_RS13115 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M3_RS13115 PF03449 Transcription elongation factor, N-terminal K08M3_RS13120 PF13609 Gram-negative porin K08M3_RS13125 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family K08M3_RS13135 PF00579 tRNA synthetases class I (W and Y) K08M3_RS13140 PF01551 Peptidase family M23 K08M3_RS13140 PF08525 Opacity-associated protein A N-terminal motif K08M3_RS13140 PF01476 LysM domain K08M3_RS13145 PF00873 AcrB/AcrD/AcrF family K08M3_RS13155 PF01521 Iron-sulphur cluster biosynthesis K08M3_RS13160 PF00202 Aminotransferase class-III K08M3_RS13165 PF01594 AI-2E family transporter K08M3_RS13170 PF08468 Methyltransferase small domain N-terminal K08M3_RS13170 PF05175 Methyltransferase small domain K08M3_RS13175 PF00072 Response regulator receiver domain K08M3_RS13175 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS13175 PF09308 LuxQ, periplasmic K08M3_RS13180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS13185 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS13190 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M3_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS13195 PF00005 ABC transporter K08M3_RS13195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS13200 PF00005 ABC transporter K08M3_RS13200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS13210 PF01869 BadF/BadG/BcrA/BcrD ATPase family K08M3_RS13215 PF00728 Glycosyl hydrolase family 20, catalytic domain K08M3_RS13215 PF02838 Glycosyl hydrolase family 20, domain 2 K08M3_RS13220 PF06165 Glycosyltransferase family 36 K08M3_RS13220 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain K08M3_RS13225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M3_RS13225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M3_RS13225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M3_RS13225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M3_RS13230 PF00005 ABC transporter K08M3_RS13230 PF08402 TOBE domain K08M3_RS13240 PF13416 Bacterial extracellular solute-binding protein K08M3_RS13245 PF00909 Ammonium Transporter Family K08M3_RS13250 PF00543 Nitrogen regulatory protein P-II K08M3_RS13255 PF06062 Uncharacterised protein family (UPF0231) K08M3_RS13260 PF11791 Aconitate B N-terminal domain K08M3_RS13260 PF00330 Aconitase family (aconitate hydratase) K08M3_RS13260 PF06434 Aconitate hydratase 2 N-terminus K08M3_RS13265 PF01734 Patatin-like phospholipase K08M3_RS13270 PF00912 Transglycosylase K08M3_RS13270 PF00905 Penicillin binding protein transpeptidase domain K08M3_RS13270 PF14814 Bifunctional transglycosylase second domain K08M3_RS13275 PF08482 ATP-dependent helicase C-terminal K08M3_RS13275 PF00270 DEAD/DEAH box helicase K08M3_RS13275 PF04408 Helicase associated domain (HA2) K08M3_RS13275 PF00271 Helicase conserved C-terminal domain K08M3_RS13280 PF03749 Sugar fermentation stimulation protein RE domain K08M3_RS13280 PF17746 SfsA N-terminal OB domain K08M3_RS13285 PF01258 Prokaryotic dksA/traR C4-type zinc finger K08M3_RS13290 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M3_RS13295 PF12626 Polymerase A arginine-rich C-terminus K08M3_RS13295 PF01743 Poly A polymerase head domain K08M3_RS13295 PF12627 Probable RNA and SrmB- binding site of polymerase A K08M3_RS13300 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M3_RS13305 PF02548 Ketopantoate hydroxymethyltransferase K08M3_RS13310 PF02569 Pantoate-beta-alanine ligase K08M3_RS13315 PF03279 Bacterial lipid A biosynthesis acyltransferase K08M3_RS13325 PF01061 ABC-2 type transporter K08M3_RS13330 PF00005 ABC transporter K08M3_RS13335 PF01740 STAS domain K08M3_RS13335 PF00916 Sulfate permease family K08M3_RS13340 PF00484 Carbonic anhydrase K08M3_RS13345 PF00156 Phosphoribosyl transferase domain K08M3_RS13350 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS13355 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS13355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M3_RS13360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K08M3_RS13360 PF00364 Biotin-requiring enzyme K08M3_RS13360 PF02817 e3 binding domain K08M3_RS13365 PF17831 Pyruvate dehydrogenase E1 component middle domain K08M3_RS13365 PF00456 Transketolase, thiamine diphosphate binding domain K08M3_RS13370 PF07729 FCD domain K08M3_RS13370 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS13375 PF01510 N-acetylmuramoyl-L-alanine amidase K08M3_RS13380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain K08M3_RS13380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain K08M3_RS13385 PF00114 Pilin (bacterial filament) K08M3_RS13385 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS13390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K08M3_RS13390 PF00437 Type II/IV secretion system protein K08M3_RS13395 PF00482 Type II secretion system (T2SS), protein F K08M3_RS13400 PF01478 Type IV leader peptidase family K08M3_RS13400 PF06750 Bacterial Peptidase A24 N-terminal domain K08M3_RS13405 PF01121 Dephospho-CoA kinase K08M3_RS13410 PF07072 Cell division protein K08M3_RS13415 PF03884 DNA gyrase inhibitor YacG K08M3_RS13420 PF01245 Ribosomal protein L19 K08M3_RS13425 PF01746 tRNA (Guanine-1)-methyltransferase K08M3_RS13430 PF01782 RimM N-terminal domain K08M3_RS13430 PF05239 PRC-barrel domain K08M3_RS13435 PF00886 Ribosomal protein S16 K08M3_RS13440 PF02881 SRP54-type protein, helical bundle domain K08M3_RS13440 PF00448 SRP54-type protein, GTPase domain K08M3_RS13440 PF02978 Signal peptide binding domain K08M3_RS13445 PF01578 Cytochrome C assembly protein K08M3_RS13450 PF03471 Transporter associated domain K08M3_RS13450 PF00571 CBS domain K08M3_RS13450 PF01595 Cyclin M transmembrane N-terminal domain K08M3_RS13455 PF02664 S-Ribosylhomocysteinase (LuxS) K08M3_RS13465 PF04262 Glutamate-cysteine ligase K08M3_RS13470 PF05193 Peptidase M16 inactive domain K08M3_RS13470 PF00675 Insulinase (Peptidase family M16) K08M3_RS13475 PF09335 SNARE associated Golgi protein K08M3_RS13480 PF00107 Zinc-binding dehydrogenase K08M3_RS13480 PF08240 Alcohol dehydrogenase GroES-like domain K08M3_RS13485 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit K08M3_RS13490 PF02436 Conserved carboxylase domain K08M3_RS13490 PF00682 HMGL-like K08M3_RS13490 PF00364 Biotin-requiring enzyme K08M3_RS13495 PF04277 Oxaloacetate decarboxylase, gamma chain K08M3_RS13550 PF02599 Global regulator protein family K08M3_RS13555 PF01842 ACT domain K08M3_RS13555 PF00696 Amino acid kinase family K08M3_RS13555 PF13840 ACT domain K08M3_RS13560 PF02272 DHHA1 domain K08M3_RS13560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M3_RS13560 PF01411 tRNA synthetases class II (A) K08M3_RS13565 PF02631 RecX family K08M3_RS13570 PF00154 recA bacterial DNA recombination protein K08M3_RS13575 PF02464 Competence-damaged protein K08M3_RS13580 PF05192 MutS domain III K08M3_RS13580 PF05188 MutS domain II K08M3_RS13580 PF01624 MutS domain I K08M3_RS13580 PF00488 MutS domain V K08M3_RS13580 PF05190 MutS family domain IV K08M3_RS13585 PF04545 Sigma-70, region 4 K08M3_RS13585 PF04539 Sigma-70 region 3 K08M3_RS13585 PF04542 Sigma-70 region 2 K08M3_RS13585 PF00140 Sigma-70 factor, region 1.2 K08M3_RS13590 PF01476 LysM domain K08M3_RS13590 PF01551 Peptidase family M23 K08M3_RS13600 PF01975 Survival protein SurE K08M3_RS13605 PF01142 tRNA pseudouridine synthase D (TruD) K08M3_RS13610 PF02542 YgbB family K08M3_RS13615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K08M3_RS13620 PF04977 Septum formation initiator K08M3_RS13625 PF03952 Enolase, N-terminal domain K08M3_RS13625 PF00113 Enolase, C-terminal TIM barrel domain K08M3_RS13630 PF06418 CTP synthase N-terminus K08M3_RS13630 PF00117 Glutamine amidotransferase class-I K08M3_RS13635 PF03819 MazG nucleotide pyrophosphohydrolase domain K08M3_RS13640 PF13291 ACT domain K08M3_RS13640 PF02824 TGS domain K08M3_RS13640 PF04607 Region found in RelA / SpoT proteins K08M3_RS13645 PF05958 tRNA (Uracil-5-)-methyltransferase K08M3_RS13645 PF01938 TRAM domain K08M3_RS13655 PF01627 Hpt domain K08M3_RS13655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K08M3_RS13655 PF00672 HAMP domain K08M3_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS13655 PF00072 Response regulator receiver domain K08M3_RS13655 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS13660 PF01648 4'-phosphopantetheinyl transferase superfamily K08M3_RS13665 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ K08M3_RS13670 PF11967 Recombination protein O N terminal K08M3_RS13670 PF02565 Recombination protein O C terminal K08M3_RS13675 PF01926 50S ribosome-binding GTPase K08M3_RS13675 PF07650 KH domain K08M3_RS13680 PF00035 Double-stranded RNA binding motif K08M3_RS13680 PF14622 Ribonuclease-III-like K08M3_RS13685 PF10502 Signal peptidase, peptidase S26 K08M3_RS13690 PF00679 Elongation factor G C-terminus K08M3_RS13690 PF03144 Elongation factor Tu domain 2 K08M3_RS13690 PF06421 GTP-binding protein LepA C-terminus K08M3_RS13690 PF00009 Elongation factor Tu GTP binding domain K08M3_RS13700 PF03888 MucB/RseB N-terminal domain K08M3_RS13700 PF17188 MucB/RseB C-terminal domain K08M3_RS13705 PF03873 Anti sigma-E protein RseA, C-terminal domain K08M3_RS13705 PF03872 Anti sigma-E protein RseA, N-terminal domain K08M3_RS13710 PF08281 Sigma-70, region 4 K08M3_RS13710 PF04542 Sigma-70 region 2 K08M3_RS13715 PF00890 FAD binding domain K08M3_RS13715 PF02910 Fumarate reductase flavoprotein C-term K08M3_RS13725 PF03937 Flavinator of succinate dehydrogenase K08M3_RS13745 PF01494 FAD binding domain K08M3_RS13750 PF01494 FAD binding domain K08M3_RS13755 PF03695 Uncharacterised protein family (UPF0149) K08M3_RS13760 PF05164 Cell division protein ZapA K08M3_RS13770 PF01812 5-formyltetrahydrofolate cyclo-ligase family K08M3_RS13775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K08M3_RS13780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M3_RS13780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M3_RS13780 PF01842 ACT domain K08M3_RS13785 PF04402 Protein of unknown function (DUF541) K08M3_RS13790 PF03466 LysR substrate binding domain K08M3_RS13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS13795 PF01810 LysE type translocator K08M3_RS13805 PF05552 Conserved TM helix K08M3_RS13805 PF00924 Mechanosensitive ion channel K08M3_RS13810 PF01116 Fructose-bisphosphate aldolase class-II K08M3_RS13815 PF00162 Phosphoglycerate kinase K08M3_RS13820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M3_RS13820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS13825 PF00593 TonB dependent receptor K08M3_RS13825 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS13830 PF03466 LysR substrate binding domain K08M3_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS13835 PF00456 Transketolase, thiamine diphosphate binding domain K08M3_RS13835 PF02780 Transketolase, C-terminal domain K08M3_RS13835 PF02779 Transketolase, pyrimidine binding domain K08M3_RS13845 PF02772 S-adenosylmethionine synthetase, central domain K08M3_RS13845 PF02773 S-adenosylmethionine synthetase, C-terminal domain K08M3_RS13845 PF00438 S-adenosylmethionine synthetase, N-terminal domain K08M3_RS13855 PF10263 SprT-like family K08M3_RS13855 PF17283 SprT-like zinc ribbon domain K08M3_RS13860 PF04231 Endonuclease I K08M3_RS13865 PF04452 RNA methyltransferase K08M3_RS13870 PF02951 Prokaryotic glutathione synthetase, N-terminal domain K08M3_RS13870 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain K08M3_RS13875 PF02622 Uncharacterized ACR, COG1678 K08M3_RS13880 PF03652 Holliday junction resolvase K08M3_RS13885 PF00437 Type II/IV secretion system protein K08M3_RS13890 PF00437 Type II/IV secretion system protein K08M3_RS13895 PF01168 Alanine racemase, N-terminal domain K08M3_RS13900 PF14748 Pyrroline-5-carboxylate reductase dimerisation K08M3_RS13900 PF03807 NADP oxidoreductase coenzyme F420-dependent K08M3_RS13905 PF02325 YGGT family K08M3_RS13910 PF02594 Uncharacterised ACR, YggU family COG1872 K08M3_RS13920 PF01725 Ham1 family K08M3_RS13925 PF04055 Radical SAM superfamily K08M3_RS13925 PF06969 HemN C-terminal domain K08M3_RS13930 PF04960 Glutaminase K08M3_RS13935 PF02086 D12 class N6 adenine-specific DNA methyltransferase K08M3_RS13940 PF02390 Putative methyltransferase K08M3_RS13945 PF14815 NUDIX domain K08M3_RS13945 PF00730 HhH-GPD superfamily base excision DNA repair protein K08M3_RS13945 PF00633 Helix-hairpin-helix motif K08M3_RS13950 PF04362 Bacterial Fe(2+) trafficking K08M3_RS13955 PF01464 Transglycosylase SLT domain K08M3_RS13955 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain K08M3_RS13995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS13995 PF00672 HAMP domain K08M3_RS13995 PF17200 Single Cache domain 2 K08M3_RS14030 PF00171 Aldehyde dehydrogenase family K08M3_RS14080 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS14085 PF04794 YdjC-like protein K08M3_RS14090 PF02056 Family 4 glycosyl hydrolase K08M3_RS14090 PF11975 Family 4 glycosyl hydrolase C-terminal domain K08M3_RS14095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit K08M3_RS14100 PF02378 Phosphotransferase system, EIIC K08M3_RS14105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M3_RS14110 PF01522 Polysaccharide deacetylase K08M3_RS14125 PF10011 Predicted membrane protein (DUF2254) K08M3_RS14135 PF03739 Lipopolysaccharide export system permease LptF/LptG K08M3_RS14140 PF03739 Lipopolysaccharide export system permease LptF/LptG K08M3_RS14145 PF02789 Cytosol aminopeptidase family, N-terminal domain K08M3_RS14145 PF00883 Cytosol aminopeptidase family, catalytic domain K08M3_RS14150 PF04364 DNA polymerase III chi subunit, HolC K08M3_RS14155 PF10458 Valyl tRNA synthetase tRNA binding arm K08M3_RS14155 PF00133 tRNA synthetases class I (I, L, M and V) K08M3_RS14155 PF08264 Anticodon-binding domain of tRNA K08M3_RS14165 PF00583 Acetyltransferase (GNAT) family K08M3_RS14175 PF06877 Regulator of ribonuclease activity B K08M3_RS14185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M3_RS14185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M3_RS14195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M3_RS14195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M3_RS14200 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain K08M3_RS14200 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain K08M3_RS14205 PF01042 Endoribonuclease L-PSP K08M3_RS14210 PF01553 Acyltransferase K08M3_RS14215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K08M3_RS14220 PF01722 BolA-like protein K08M3_RS14230 PF05494 MlaC protein K08M3_RS14235 PF02470 MlaD protein K08M3_RS14240 PF02405 Permease MlaE K08M3_RS14245 PF00005 ABC transporter K08M3_RS14250 PF01699 Sodium/calcium exchanger protein K08M3_RS14255 PF00571 CBS domain K08M3_RS14255 PF01380 SIS domain K08M3_RS14265 PF03968 OstA-like protein K08M3_RS14270 PF12399 Branched-chain amino acid ATP-binding cassette transporter K08M3_RS14270 PF00005 ABC transporter K08M3_RS14275 PF04963 Sigma-54 factor, core binding domain K08M3_RS14275 PF00309 Sigma-54 factor, Activator interacting domain (AID) K08M3_RS14275 PF04552 Sigma-54, DNA binding domain K08M3_RS14280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K08M3_RS14285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M3_RS14290 PF03668 P-loop ATPase protein family K08M3_RS14295 PF00381 PTS HPr component phosphorylation site K08M3_RS14300 PF03448 MgtE intracellular N domain K08M3_RS14300 PF01769 Divalent cation transporter K08M3_RS14300 PF00571 CBS domain K08M3_RS14305 PF01523 Putative modulator of DNA gyrase K08M3_RS14310 PF04751 Protein of unknown function (DUF615) K08M3_RS14315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M3_RS14315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M3_RS14320 PF00849 RNA pseudouridylate synthase K08M3_RS14330 PF00271 Helicase conserved C-terminal domain K08M3_RS14330 PF12137 RNA polymerase recycling family C-terminal K08M3_RS14330 PF00176 SNF2 family N-terminal domain K08M3_RS14330 PF18337 RapA N-terminal Tudor like domain K08M3_RS14330 PF18339 RapA N-terminal Tudor like domain 1 K08M3_RS14335 PF13638 PIN domain K08M3_RS14335 PF02562 PhoH-like protein K08M3_RS14340 PF01523 Putative modulator of DNA gyrase K08M3_RS14345 PF00795 Carbon-nitrogen hydrolase K08M3_RS14350 PF13116 Protein of unknown function K08M3_RS14350 PF13502 AsmA-like C-terminal region K08M3_RS14355 PF10150 Ribonuclease E/G family K08M3_RS14355 PF00575 S1 RNA binding domain K08M3_RS14360 PF02545 Maf-like protein K08M3_RS14365 PF04093 rod shape-determining protein MreD K08M3_RS14370 PF04085 rod shape-determining protein MreC K08M3_RS14410 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS14420 PF00482 Type II secretion system (T2SS), protein F K08M3_RS14425 PF00437 Type II/IV secretion system protein K08M3_RS14425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K08M3_RS14435 PF13401 AAA domain K08M3_RS14435 PF01471 Putative peptidoglycan binding domain K08M3_RS14440 PF00263 Bacterial type II and III secretion system protein K08M3_RS14440 PF03958 Bacterial type II/III secretion system short domain K08M3_RS14460 PF17157 Gammaproteobacterial periplasmic sensor domain K08M3_RS14460 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS14460 PF00563 EAL domain K08M3_RS14465 PF00436 Single-strand binding protein family K08M3_RS14470 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS14475 PF00483 Nucleotidyl transferase K08M3_RS14480 PF17755 UvrA DNA-binding domain K08M3_RS14480 PF00005 ABC transporter K08M3_RS14480 PF17760 UvrA interaction domain K08M3_RS14495 PF00266 Aminotransferase class-V K08M3_RS14505 PF01842 ACT domain K08M3_RS14505 PF00696 Amino acid kinase family K08M3_RS14510 PF00809 Pterin binding enzyme K08M3_RS14510 PF02965 Vitamin B12 dependent methionine synthase, activation domain K08M3_RS14510 PF02607 B12 binding domain K08M3_RS14510 PF02310 B12 binding domain K08M3_RS14510 PF02574 Homocysteine S-methyltransferase K08M3_RS14515 PF00999 Sodium/hydrogen exchanger family K08M3_RS14580 PF01507 Phosphoadenosine phosphosulfate reductase family K08M3_RS14585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M3_RS14585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M3_RS14590 PF00667 FAD binding domain K08M3_RS14590 PF00175 Oxidoreductase NAD-binding domain K08M3_RS14590 PF00258 Flavodoxin K08M3_RS14610 PF01207 Dihydrouridine synthase (Dus) K08M3_RS14615 PF01475 Ferric uptake regulator family K08M3_RS14625 PF00342 Phosphoglucose isomerase K08M3_RS14630 PF01894 Uncharacterised protein family UPF0047 K08M3_RS14635 PF00842 Alanine racemase, C-terminal domain K08M3_RS14635 PF01168 Alanine racemase, N-terminal domain K08M3_RS14640 PF03796 DnaB-like helicase C terminal domain K08M3_RS14640 PF00772 DnaB-like helicase N terminal domain K08M3_RS14650 PF03948 Ribosomal protein L9, C-terminal domain K08M3_RS14650 PF01281 Ribosomal protein L9, N-terminal domain K08M3_RS14655 PF01084 Ribosomal protein S18 K08M3_RS14660 PF00436 Single-strand binding protein family K08M3_RS14665 PF01250 Ribosomal protein S6 K08M3_RS14670 PF00834 Ribulose-phosphate 3 epimerase family K08M3_RS14675 PF02086 D12 class N6 adenine-specific DNA methyltransferase K08M3_RS14685 PF01761 3-dehydroquinate synthase K08M3_RS14690 PF01202 Shikimate kinase K08M3_RS14695 PF07660 Secretin and TonB N terminus short domain K08M3_RS14695 PF03958 Bacterial type II/III secretion system short domain K08M3_RS14695 PF00263 Bacterial type II and III secretion system protein K08M3_RS14695 PF11741 AMIN domain K08M3_RS14700 PF04351 Pilus assembly protein, PilP K08M3_RS14720 PF00905 Penicillin binding protein transpeptidase domain K08M3_RS14720 PF00912 Transglycosylase K08M3_RS14720 PF17092 Penicillin-binding protein OB-like domain K08M3_RS14725 PF03466 LysR substrate binding domain K08M3_RS14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS14730 PF08534 Redoxin K08M3_RS14730 PF00462 Glutaredoxin K08M3_RS14735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M3_RS14735 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS14750 PF00583 Acetyltransferase (GNAT) family K08M3_RS14750 PF14698 Argininosuccinate lyase C-terminal K08M3_RS14750 PF00206 Lyase K08M3_RS14755 PF00764 Arginosuccinate synthase K08M3_RS14760 PF00696 Amino acid kinase family K08M3_RS14765 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M3_RS14765 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M3_RS14770 PF01546 Peptidase family M20/M25/M40 K08M3_RS14770 PF07687 Peptidase dimerisation domain K08M3_RS14775 PF00311 Phosphoenolpyruvate carboxylase K08M3_RS14785 PF02219 Methylenetetrahydrofolate reductase K08M3_RS14790 PF03447 Homoserine dehydrogenase, NAD binding domain K08M3_RS14790 PF00742 Homoserine dehydrogenase K08M3_RS14790 PF00696 Amino acid kinase family K08M3_RS14795 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M3_RS14800 PF01340 Met Apo-repressor, MetJ K08M3_RS14805 PF00390 Malic enzyme, N-terminal domain K08M3_RS14805 PF03949 Malic enzyme, NAD binding domain K08M3_RS14810 PF00210 Ferritin-like domain K08M3_RS14815 PF04324 BFD-like [2Fe-2S] binding domain K08M3_RS14820 PF03144 Elongation factor Tu domain 2 K08M3_RS14820 PF00009 Elongation factor Tu GTP binding domain K08M3_RS14820 PF03143 Elongation factor Tu C-terminal domain K08M3_RS14825 PF03764 Elongation factor G, domain IV K08M3_RS14825 PF00679 Elongation factor G C-terminus K08M3_RS14825 PF00009 Elongation factor Tu GTP binding domain K08M3_RS14825 PF03144 Elongation factor Tu domain 2 K08M3_RS14825 PF14492 Elongation Factor G, domain II K08M3_RS14830 PF00177 Ribosomal protein S7p/S5e K08M3_RS14835 PF00164 Ribosomal protein S12/S23 K08M3_RS14840 PF04077 DsrH like protein K08M3_RS14845 PF02635 DsrE/DsrF-like family K08M3_RS14850 PF02635 DsrE/DsrF-like family K08M3_RS14855 PF13309 HTH domain K08M3_RS14855 PF08348 YheO-like PAS domain K08M3_RS14860 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M3_RS14860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M3_RS14870 PF04102 SlyX K08M3_RS14875 PF01112 Asparaginase K08M3_RS14885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M3_RS14895 PF02254 TrkA-N domain K08M3_RS14895 PF00999 Sodium/hydrogen exchanger family K08M3_RS14900 PF02525 Flavodoxin-like fold K08M3_RS14905 PF00005 ABC transporter K08M3_RS14905 PF12848 ABC transporter K08M3_RS14915 PF00561 alpha/beta hydrolase fold K08M3_RS14920 PF06794 Uncharacterised protein family (UPF0270) K08M3_RS14925 PF00485 Phosphoribulokinase / Uridine kinase family K08M3_RS14930 PF13545 Crp-like helix-turn-helix domain K08M3_RS14930 PF00027 Cyclic nucleotide-binding domain K08M3_RS14940 PF00171 Aldehyde dehydrogenase family K08M3_RS14945 PF04958 Arginine N-succinyltransferase beta subunit K08M3_RS14950 PF00202 Aminotransferase class-III K08M3_RS14955 PF00117 Glutamine amidotransferase class-I K08M3_RS14970 PF00579 tRNA synthetases class I (W and Y) K08M3_RS14975 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS14980 PF00588 SpoU rRNA Methylase family K08M3_RS14980 PF08032 RNA 2'-O ribose methyltransferase substrate binding K08M3_RS14985 PF08206 Ribonuclease B OB domain K08M3_RS14985 PF17876 Cold shock domain K08M3_RS14985 PF00773 RNB domain K08M3_RS14985 PF00575 S1 RNA binding domain K08M3_RS14985 PF08461 Ribonuclease R winged-helix domain K08M3_RS14990 PF02082 Transcriptional regulator K08M3_RS14995 PF00175 Oxidoreductase NAD-binding domain K08M3_RS14995 PF00970 Oxidoreductase FAD-binding domain K08M3_RS14995 PF00042 Globin K08M3_RS15000 PF08238 Sel1 repeat K08M3_RS15005 PF00709 Adenylosuccinate synthetase K08M3_RS15010 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) K08M3_RS15015 PF01145 SPFH domain / Band 7 family K08M3_RS15020 PF12221 Bacterial membrane protein N terminal K08M3_RS15020 PF01145 SPFH domain / Band 7 family K08M3_RS15025 PF13167 GTP-binding GTPase N-terminal K08M3_RS15025 PF01926 50S ribosome-binding GTPase K08M3_RS15025 PF16360 GTP-binding GTPase Middle Region K08M3_RS15030 PF17209 Hfq protein K08M3_RS15040 PF08676 MutL C terminal dimerisation domain K08M3_RS15040 PF01119 DNA mismatch repair protein, C-terminal domain K08M3_RS15045 PF01520 N-acetylmuramoyl-L-alanine amidase K08M3_RS15050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE K08M3_RS15060 PF08331 Domain of unknown function (DUF1730) K08M3_RS15125 PF00929 Exonuclease K08M3_RS15130 PF03193 RsgA GTPase K08M3_RS15135 PF02666 Phosphatidylserine decarboxylase K08M3_RS15140 PF00939 Sodium:sulfate symporter transmembrane region K08M3_RS15150 PF01676 Metalloenzyme superfamily K08M3_RS15150 PF06415 BPG-independent PGAM N-terminus (iPGM_N) K08M3_RS15155 PF00581 Rhodanese-like domain K08M3_RS15160 PF02556 Preprotein translocase subunit SecB K08M3_RS15165 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K08M3_RS15165 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K08M3_RS15170 PF06426 Serine acetyltransferase, N-terminal K08M3_RS15170 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS15175 PF01551 Peptidase family M23 K08M3_RS15185 PF08360 QacR-like protein, C-terminal region K08M3_RS15185 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS15195 PF00152 tRNA synthetases class II (D, K and N) K08M3_RS15200 PF00890 FAD binding domain K08M3_RS15200 PF02910 Fumarate reductase flavoprotein C-term K08M3_RS15205 PF13085 2Fe-2S iron-sulfur cluster binding domain K08M3_RS15205 PF13183 4Fe-4S dicluster domain K08M3_RS15210 PF02300 Fumarate reductase subunit C K08M3_RS15215 PF02313 Fumarate reductase subunit D K08M3_RS15225 PF01132 Elongation factor P (EF-P) OB domain K08M3_RS15225 PF09285 Elongation factor P, C-terminal K08M3_RS15225 PF08207 Elongation factor P (EF-P) KOW-like domain K08M3_RS15230 PF04055 Radical SAM superfamily K08M3_RS15235 PF02308 MgtC family K08M3_RS15245 PF00118 TCP-1/cpn60 chaperonin family K08M3_RS15250 PF00166 Chaperonin 10 Kd subunit K08M3_RS15260 PF01554 MatE K08M3_RS15265 PF00365 Phosphofructokinase K08M3_RS15270 PF16916 Dimerisation domain of Zinc Transporter K08M3_RS15270 PF01545 Cation efflux family K08M3_RS15275 PF07813 LTXXQ motif family protein K08M3_RS15280 PF00072 Response regulator receiver domain K08M3_RS15280 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS15285 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS15285 PF16527 Two-component sensor protein CpxA, periplasmic domain K08M3_RS15285 PF00672 HAMP domain K08M3_RS15290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K08M3_RS15290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K08M3_RS15295 PF00588 SpoU rRNA Methylase family K08M3_RS15300 PF04186 FxsA cytoplasmic membrane protein K08M3_RS15305 PF00206 Lyase K08M3_RS15305 PF10415 Fumarase C C-terminus K08M3_RS15310 PF03605 Anaerobic c4-dicarboxylate membrane transporter K08M3_RS15315 PF02683 Cytochrome C biogenesis protein transmembrane region K08M3_RS15315 PF11412 Disulphide bond corrector protein DsbC K08M3_RS15320 PF00072 Response regulator receiver domain K08M3_RS15320 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS15325 PF00999 Sodium/hydrogen exchanger family K08M3_RS15325 PF03471 Transporter associated domain K08M3_RS15325 PF02080 TrkA-C domain K08M3_RS15335 PF00474 Sodium:solute symporter family K08M3_RS15350 PF10415 Fumarase C C-terminus K08M3_RS15350 PF00206 Lyase K08M3_RS15355 PF09308 LuxQ, periplasmic K08M3_RS15355 PF00072 Response regulator receiver domain K08M3_RS15355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS15355 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS15360 PF12832 MFS_1 like family K08M3_RS15375 PF00501 AMP-binding enzyme K08M3_RS15375 PF13193 AMP-binding enzyme C-terminal domain K08M3_RS15375 PF16177 Acetyl-coenzyme A synthetase N-terminus K08M3_RS15380 PF01220 Dehydroquinase class II K08M3_RS15385 PF00364 Biotin-requiring enzyme K08M3_RS15390 PF00289 Biotin carboxylase, N-terminal domain K08M3_RS15390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K08M3_RS15390 PF02785 Biotin carboxylase C-terminal domain K08M3_RS15400 PF01207 Dihydrouridine synthase (Dus) K08M3_RS15405 PF02954 Bacterial regulatory protein, Fis family K08M3_RS15415 PF00005 ABC transporter K08M3_RS15415 PF12848 ABC transporter K08M3_RS15465 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain K08M3_RS15465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain K08M3_RS15465 PF01276 Orn/Lys/Arg decarboxylase, major domain K08M3_RS15470 PF13520 Amino acid permease K08M3_RS15480 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS15480 PF18500 CadC C-terminal domain 1 K08M3_RS15485 PF13411 MerR HTH family regulatory protein K08M3_RS15495 PF02142 MGS-like domain K08M3_RS15495 PF01808 AICARFT/IMPCHase bienzyme K08M3_RS15500 PF02844 Phosphoribosylglycinamide synthetase, N domain K08M3_RS15500 PF02843 Phosphoribosylglycinamide synthetase, C domain K08M3_RS15500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K08M3_RS15510 PF00216 Bacterial DNA-binding protein K08M3_RS15515 PF00571 CBS domain K08M3_RS15515 PF01595 Cyclin M transmembrane N-terminal domain K08M3_RS15520 PF04222 Protein of unknown function (DUF416) K08M3_RS15525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M3_RS15530 PF03167 Uracil DNA glycosylase superfamily K08M3_RS15535 PF01208 Uroporphyrinogen decarboxylase (URO-D) K08M3_RS15540 PF00293 NUDIX domain K08M3_RS15540 PF09297 NADH pyrophosphatase zinc ribbon domain K08M3_RS15545 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ K08M3_RS15550 PF04998 RNA polymerase Rpb1, domain 5 K08M3_RS15550 PF04997 RNA polymerase Rpb1, domain 1 K08M3_RS15550 PF05000 RNA polymerase Rpb1, domain 4 K08M3_RS15550 PF00623 RNA polymerase Rpb1, domain 2 K08M3_RS15550 PF04983 RNA polymerase Rpb1, domain 3 K08M3_RS15555 PF04561 RNA polymerase Rpb2, domain 2 K08M3_RS15555 PF10385 RNA polymerase beta subunit external 1 domain K08M3_RS15555 PF04563 RNA polymerase beta subunit K08M3_RS15555 PF00562 RNA polymerase Rpb2, domain 6 K08M3_RS15555 PF04565 RNA polymerase Rpb2, domain 3 K08M3_RS15555 PF04560 RNA polymerase Rpb2, domain 7 K08M3_RS15560 PF16320 Ribosomal protein L7/L12 dimerisation domain K08M3_RS15560 PF00542 Ribosomal protein L7/L12 C-terminal domain K08M3_RS15565 PF00466 Ribosomal protein L10 K08M3_RS15570 PF00687 Ribosomal protein L1p/L10e family K08M3_RS15575 PF00298 Ribosomal protein L11, RNA binding domain K08M3_RS15575 PF03946 Ribosomal protein L11, N-terminal domain K08M3_RS15580 PF02357 Transcription termination factor nusG K08M3_RS15580 PF00467 KOW motif K08M3_RS15585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex K08M3_RS15595 PF03144 Elongation factor Tu domain 2 K08M3_RS15595 PF00009 Elongation factor Tu GTP binding domain K08M3_RS15595 PF03143 Elongation factor Tu C-terminal domain K08M3_RS15625 PF00485 Phosphoribulokinase / Uridine kinase family K08M3_RS15630 PF02237 Biotin protein ligase C terminal domain K08M3_RS15630 PF03099 Biotin/lipoate A/B protein ligase family K08M3_RS15630 PF08279 HTH domain K08M3_RS15635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K08M3_RS15635 PF01565 FAD binding domain K08M3_RS15645 PF13091 PLD-like domain K08M3_RS15710 PF01177 Asp/Glu/Hydantoin racemase K08M3_RS15720 PF00593 TonB dependent receptor K08M3_RS15720 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS15725 PF05958 tRNA (Uracil-5-)-methyltransferase K08M3_RS15735 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS15740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M3_RS15740 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS15745 PF01554 MatE K08M3_RS15750 PF04072 Leucine carboxyl methyltransferase K08M3_RS15760 PF01726 LexA DNA binding domain K08M3_RS15760 PF00717 Peptidase S24-like K08M3_RS15770 PF01553 Acyltransferase K08M3_RS15775 PF01040 UbiA prenyltransferase family K08M3_RS15780 PF04345 Chorismate lyase K08M3_RS15785 PF03748 Flagellar basal body-associated protein FliL K08M3_RS15790 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease K08M3_RS15790 PF01694 Rhomboid family K08M3_RS15795 PF00581 Rhodanese-like domain K08M3_RS15805 PF00140 Sigma-70 factor, region 1.2 K08M3_RS15805 PF04545 Sigma-70, region 4 K08M3_RS15805 PF04542 Sigma-70 region 2 K08M3_RS15810 PF18075 FtsX extracellular domain K08M3_RS15815 PF00005 ABC transporter K08M3_RS15820 PF00448 SRP54-type protein, GTPase domain K08M3_RS15820 PF02881 SRP54-type protein, helical bundle domain K08M3_RS15835 PF01914 MarC family integral membrane protein K08M3_RS15860 PF10694 Protein of unknown function (DUF2500) K08M3_RS15885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M3_RS15885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS15890 PF01022 Bacterial regulatory protein, arsR family K08M3_RS15895 PF00563 EAL domain K08M3_RS15895 PF08668 HDOD domain K08M3_RS15900 PF01810 LysE type translocator K08M3_RS15905 PF12146 Serine aminopeptidase, S33 K08M3_RS15925 PF03942 DTW domain K08M3_RS15930 PF10442 FIST C domain K08M3_RS15930 PF08495 FIST N domain K08M3_RS15930 PF00563 EAL domain K08M3_RS15930 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS15935 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS15940 PF02899 Phage integrase, N-terminal SAM-like domain K08M3_RS15940 PF00589 Phage integrase family K08M3_RS15950 PF01678 Diaminopimelate epimerase K08M3_RS15955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K08M3_RS15955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K08M3_RS15965 PF01491 Frataxin-like domain K08M3_RS15970 PF01295 Adenylate cyclase, class-I K08M3_RS15970 PF12633 Adenylate cyclase NT domain K08M3_RS15975 PF03900 Porphobilinogen deaminase, C-terminal domain K08M3_RS15975 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain K08M3_RS15980 PF02602 Uroporphyrinogen-III synthase HemD K08M3_RS15985 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase K08M3_RS15990 PF07219 HemY protein N-terminus K08M3_RS16025 PF00175 Oxidoreductase NAD-binding domain K08M3_RS16030 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M3_RS16035 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K08M3_RS16045 PF07497 Rho termination factor, RNA-binding domain K08M3_RS16045 PF07498 Rho termination factor, N-terminal domain K08M3_RS16045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M3_RS16050 PF00085 Thioredoxin K08M3_RS16055 PF00270 DEAD/DEAH box helicase K08M3_RS16055 PF00271 Helicase conserved C-terminal domain K08M3_RS16060 PF02541 Ppx/GppA phosphatase family K08M3_RS16070 PF02592 Putative vitamin uptake transporter K08M3_RS16080 PF00271 Helicase conserved C-terminal domain K08M3_RS16080 PF00270 DEAD/DEAH box helicase K08M3_RS16080 PF00570 HRDC domain K08M3_RS16080 PF16124 RecQ zinc-binding K08M3_RS16080 PF09382 RQC domain K08M3_RS16085 PF00892 EamA-like transporter family K08M3_RS16095 PF01810 LysE type translocator K08M3_RS16105 PF13361 UvrD-like helicase C-terminal domain K08M3_RS16105 PF00580 UvrD/REP helicase N-terminal domain K08M3_RS16115 PF05114 Protein of unknown function (DUF692) K08M3_RS16135 PF07690 Major Facilitator Superfamily K08M3_RS16140 PF03466 LysR substrate binding domain K08M3_RS16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS16145 PF01321 Creatinase/Prolidase N-terminal domain K08M3_RS16145 PF00557 Metallopeptidase family M24 K08M3_RS16145 PF01321 Creatinase/Prolidase N-terminal domain K08M3_RS16145 PF00557 Metallopeptidase family M24 K08M3_RS16150 PF04055 Radical SAM superfamily K08M3_RS16150 PF06968 Biotin and Thiamin Synthesis associated domain K08M3_RS16155 PF05690 Thiazole biosynthesis protein ThiG K08M3_RS16160 PF02597 ThiS family K08M3_RS16165 PF00899 ThiF family K08M3_RS16170 PF02581 Thiamine monophosphate synthase K08M3_RS16175 PF13667 ThiC-associated domain K08M3_RS16175 PF01964 Radical SAM ThiC family K08M3_RS16180 PF02537 CrcB-like protein, Camphor Resistance (CrcB) K08M3_RS16185 PF07732 Multicopper oxidase K08M3_RS16185 PF07731 Multicopper oxidase K08M3_RS16185 PF00394 Multicopper oxidase K08M3_RS16235 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS16240 PF07369 Protein of unknown function (DUF1488) K08M3_RS16245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain K08M3_RS16245 PF08501 Shikimate dehydrogenase substrate binding domain K08M3_RS16245 PF01488 Shikimate / quinate 5-dehydrogenase K08M3_RS16250 PF01218 Coproporphyrinogen III oxidase K08M3_RS16255 PF01300 Telomere recombination K08M3_RS16260 PF00731 AIR carboxylase K08M3_RS16265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain K08M3_RS16265 PF02222 ATP-grasp domain K08M3_RS16270 PF01396 Topoisomerase DNA binding C4 zinc finger K08M3_RS16275 PF04361 Protein of unknown function (DUF494) K08M3_RS16280 PF02481 DNA recombination-mediator protein A K08M3_RS16280 PF17782 DprA winged helix domain K08M3_RS16290 PF01327 Polypeptide deformylase K08M3_RS16295 PF02911 Formyl transferase, C-terminal domain K08M3_RS16295 PF00551 Formyl transferase K08M3_RS16300 PF01189 16S rRNA methyltransferase RsmB/F K08M3_RS16300 PF01029 NusB family K08M3_RS16305 PF02080 TrkA-C domain K08M3_RS16305 PF02254 TrkA-N domain K08M3_RS16310 PF02386 Cation transport protein K08M3_RS16320 PF03006 Haemolysin-III related K08M3_RS16325 PF07070 SpoOM protein K08M3_RS16335 PF06288 Protein of unknown function (DUF1040) K08M3_RS16340 PF13746 4Fe-4S dicluster domain K08M3_RS16340 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase K08M3_RS16340 PF12801 4Fe-4S binding domain K08M3_RS16345 PF01636 Phosphotransferase enzyme family K08M3_RS16350 PF01323 DSBA-like thioredoxin domain K08M3_RS16355 PF01553 Acyltransferase K08M3_RS16365 PF01078 Magnesium chelatase, subunit ChlI K08M3_RS16365 PF13335 Magnesium chelatase, subunit ChlI C-terminal K08M3_RS16370 PF00205 Thiamine pyrophosphate enzyme, central domain K08M3_RS16370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M3_RS16370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M3_RS16380 PF01063 Amino-transferase class IV K08M3_RS16385 PF00920 Dehydratase family K08M3_RS16390 PF00291 Pyridoxal-phosphate dependent enzyme K08M3_RS16390 PF00585 C-terminal regulatory domain of Threonine dehydratase K08M3_RS16395 PF03466 LysR substrate binding domain K08M3_RS16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS16400 PF07690 Major Facilitator Superfamily K08M3_RS16405 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS16410 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS16415 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS16415 PF12804 MobA-like NTP transferase domain K08M3_RS16420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K08M3_RS16420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain K08M3_RS16425 PF02874 ATP synthase alpha/beta family, beta-barrel domain K08M3_RS16425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M3_RS16430 PF00231 ATP synthase K08M3_RS16435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M3_RS16435 PF02874 ATP synthase alpha/beta family, beta-barrel domain K08M3_RS16435 PF00306 ATP synthase alpha/beta chain, C terminal domain K08M3_RS16440 PF00213 ATP synthase delta (OSCP) subunit K08M3_RS16445 PF00430 ATP synthase B/B' CF(0) K08M3_RS16450 PF00137 ATP synthase subunit C K08M3_RS16455 PF00119 ATP synthase A chain K08M3_RS16460 PF03899 ATP synthase I chain K08M3_RS16465 PF02195 ParB-like nuclease domain K08M3_RS16465 PF17762 HTH domain found in ParB protein K08M3_RS16470 PF13614 AAA domain K08M3_RS16475 PF02527 rRNA small subunit methyltransferase G K08M3_RS16480 PF13932 GidA associated domain K08M3_RS16480 PF01134 Glucose inhibited division protein A K08M3_RS16485 PF00258 Flavodoxin K08M3_RS16490 PF10396 GTP-binding protein TrmE N-terminus K08M3_RS16490 PF01926 50S ribosome-binding GTPase K08M3_RS16490 PF12631 MnmE helical domain K08M3_RS16495 PF14849 YidC periplasmic domain K08M3_RS16495 PF02096 60Kd inner membrane protein K08M3_RS16500 PF01809 Putative membrane protein insertion efficiency factor K08M3_RS16505 PF00825 Ribonuclease P K08M3_RS16510 PF00468 Ribosomal protein L34 K08M3_RS16515 PF00005 ABC transporter K08M3_RS16520 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS16525 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS16530 PF18607 ParA helix turn helix domain K08M3_RS16530 PF13614 AAA domain K08M3_RS16535 PF08775 ParB family K08M3_RS16535 PF02195 ParB-like nuclease domain K08M3_RS16540 PF13718 GNAT acetyltransferase 2 K08M3_RS16540 PF05127 Helicase K08M3_RS16550 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS16555 PF03466 LysR substrate binding domain K08M3_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS16560 PF03575 Peptidase family S51 K08M3_RS16565 PF00267 Gram-negative porin K08M3_RS16570 PF00367 phosphotransferase system, EIIB K08M3_RS16570 PF02378 Phosphotransferase system, EIIC K08M3_RS16575 PF01380 SIS domain K08M3_RS16580 PF01380 SIS domain K08M3_RS16580 PF01418 Helix-turn-helix domain, rpiR family K08M3_RS16585 PF00246 Zinc carboxypeptidase K08M3_RS16590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS16595 PF03358 NADPH-dependent FMN reductase K08M3_RS16605 PF00664 ABC transporter transmembrane region K08M3_RS16605 PF00005 ABC transporter K08M3_RS16605 PF03412 Peptidase C39 family K08M3_RS16620 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS16625 PF00158 Sigma-54 interaction domain K08M3_RS16625 PF02954 Bacterial regulatory protein, Fis family K08M3_RS16625 PF00072 Response regulator receiver domain K08M3_RS16630 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS16630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS16630 PF02743 Cache domain K08M3_RS16635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region K08M3_RS16635 PF01243 Pyridoxamine 5'-phosphate oxidase K08M3_RS16645 PF12833 Helix-turn-helix domain K08M3_RS16650 PF18327 Proline utilization A proline dehydrogenase N-terminal domain K08M3_RS16650 PF14850 DNA-binding domain of Proline dehydrogenase K08M3_RS16650 PF01619 Proline dehydrogenase K08M3_RS16650 PF00171 Aldehyde dehydrogenase family K08M3_RS16660 PF00474 Sodium:solute symporter family K08M3_RS16690 PF01037 Lrp/AsnC ligand binding domain K08M3_RS16700 PF00664 ABC transporter transmembrane region K08M3_RS16700 PF00005 ABC transporter K08M3_RS16710 PF00271 Helicase conserved C-terminal domain K08M3_RS16710 PF00270 DEAD/DEAH box helicase K08M3_RS16715 PF03475 3-alpha domain K08M3_RS16715 PF03473 MOSC domain K08M3_RS16735 PF08281 Sigma-70, region 4 K08M3_RS16735 PF04542 Sigma-70 region 2 K08M3_RS16740 PF12833 Helix-turn-helix domain K08M3_RS16740 PF01965 DJ-1/PfpI family K08M3_RS16745 PF03466 LysR substrate binding domain K08M3_RS16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS16770 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS16770 PF13192 Thioredoxin domain K08M3_RS16775 PF00578 AhpC/TSA family K08M3_RS16775 PF10417 C-terminal domain of 1-Cys peroxiredoxin K08M3_RS16815 PF01047 MarR family K08M3_RS16820 PF02566 OsmC-like protein K08M3_RS16830 PF12833 Helix-turn-helix domain K08M3_RS16855 PF12704 MacB-like periplasmic core domain K08M3_RS16855 PF02687 FtsX-like permease family K08M3_RS16860 PF00005 ABC transporter K08M3_RS16875 PF01136 Peptidase family U32 K08M3_RS16885 PF02378 Phosphotransferase system, EIIC K08M3_RS16885 PF00367 phosphotransferase system, EIIB K08M3_RS16890 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS16890 PF00072 Response regulator receiver domain K08M3_RS16895 PF08521 Two-component sensor kinase N-terminal K08M3_RS16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS16895 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS16900 PF01547 Bacterial extracellular solute-binding protein K08M3_RS16905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K08M3_RS16905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K08M3_RS16910 PF04183 IucA / IucC family K08M3_RS16910 PF06276 Ferric iron reductase FhuF-like transporter K08M3_RS16920 PF06276 Ferric iron reductase FhuF-like transporter K08M3_RS16920 PF04183 IucA / IucC family K08M3_RS16925 PF00206 Lyase K08M3_RS16925 PF02655 ATP-grasp domain K08M3_RS16930 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS16930 PF00593 TonB dependent receptor K08M3_RS16935 PF07660 Secretin and TonB N terminus short domain K08M3_RS16935 PF00593 TonB dependent receptor K08M3_RS16935 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS16940 PF01497 Periplasmic binding protein K08M3_RS16945 PF01032 FecCD transport family K08M3_RS16950 PF01032 FecCD transport family K08M3_RS16955 PF00005 ABC transporter K08M3_RS16960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS16960 PF00672 HAMP domain K08M3_RS16960 PF17200 Single Cache domain 2 K08M3_RS16965 PF05193 Peptidase M16 inactive domain K08M3_RS16965 PF00675 Insulinase (Peptidase family M16) K08M3_RS16975 PF04225 Opacity-associated protein A LysM-like domain K08M3_RS16975 PF01551 Peptidase family M23 K08M3_RS16990 PF07690 Major Facilitator Superfamily K08M3_RS16995 PF00239 Resolvase, N terminal domain K08M3_RS16995 PF02796 Helix-turn-helix domain of resolvase K08M3_RS17000 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS17005 PF00474 Sodium:solute symporter family K08M3_RS17025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K08M3_RS17025 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K08M3_RS17035 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M3_RS17040 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS17045 PF03328 HpcH/HpaI aldolase/citrate lyase family K08M3_RS17050 PF00815 Histidinol dehydrogenase K08M3_RS17065 PF00561 alpha/beta hydrolase fold K08M3_RS17080 PF07690 Major Facilitator Superfamily K08M3_RS17085 PF00474 Sodium:solute symporter family K08M3_RS17090 PF03315 Serine dehydratase beta chain K08M3_RS17090 PF03313 Serine dehydratase alpha chain K08M3_RS17095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M3_RS17095 PF00128 Alpha amylase, catalytic domain K08M3_RS17100 PF02264 LamB porin K08M3_RS17115 PF16657 Maltogenic Amylase, C-terminal domain K08M3_RS17115 PF02903 Alpha amylase, N-terminal ig-like domain K08M3_RS17115 PF00128 Alpha amylase, catalytic domain K08M3_RS17120 PF04231 Endonuclease I K08M3_RS17125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M3_RS17125 PF11852 Domain of unknown function (DUF3372) K08M3_RS17125 PF03714 Bacterial pullanase-associated domain K08M3_RS17125 PF18494 Pullulanase Ins domain K08M3_RS17125 PF17967 Pullulanase N2 domain K08M3_RS17140 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain K08M3_RS17140 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain K08M3_RS17140 PF01276 Orn/Lys/Arg decarboxylase, major domain K08M3_RS17145 PF13520 Amino acid permease K08M3_RS17155 PF08543 Phosphomethylpyrimidine kinase K08M3_RS17160 PF00375 Sodium:dicarboxylate symporter family K08M3_RS17165 PF03193 RsgA GTPase K08M3_RS17170 PF00367 phosphotransferase system, EIIB K08M3_RS17170 PF02378 Phosphotransferase system, EIIC K08M3_RS17175 PF02630 SCO1/SenC K08M3_RS17190 PF17874 MalT-like TPR region K08M3_RS17190 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS17200 PF00343 Carbohydrate phosphorylase K08M3_RS17205 PF02446 4-alpha-glucanotransferase K08M3_RS17210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M3_RS17210 PF02806 Alpha amylase, C-terminal all-beta domain K08M3_RS17210 PF00128 Alpha amylase, catalytic domain K08M3_RS17215 PF00912 Transglycosylase K08M3_RS17220 PF00128 Alpha amylase, catalytic domain K08M3_RS17235 PF07670 Nucleoside recognition K08M3_RS17240 PF07670 Nucleoside recognition K08M3_RS17245 PF01546 Peptidase family M20/M25/M40 K08M3_RS17245 PF07687 Peptidase dimerisation domain K08M3_RS17250 PF06803 Protein of unknown function (DUF1232) K08M3_RS17255 PF00375 Sodium:dicarboxylate symporter family K08M3_RS17265 PF03466 LysR substrate binding domain K08M3_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS17270 PF08803 Putative mono-oxygenase ydhR K08M3_RS17280 PF02706 Chain length determinant protein K08M3_RS17280 PF13807 G-rich domain on putative tyrosine kinase K08M3_RS17280 PF13614 AAA domain K08M3_RS17285 PF01451 Low molecular weight phosphotyrosine protein phosphatase K08M3_RS17290 PF02563 Polysaccharide biosynthesis/export protein K08M3_RS17290 PF10531 SLBB domain K08M3_RS17290 PF18412 Outer-membrane lipoprotein Wza C-terminal domain K08M3_RS17300 PF00881 Nitroreductase family K08M3_RS17305 PF01914 MarC family integral membrane protein K08M3_RS17310 PF01734 Patatin-like phospholipase K08M3_RS17315 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading K08M3_RS17315 PF18416 N-acetylglucosamine binding protein domain 2 K08M3_RS17320 PF02469 Fasciclin domain K08M3_RS17325 PF00875 DNA photolyase K08M3_RS17325 PF03441 FAD binding domain of DNA photolyase K08M3_RS17335 PF17773 UPF0176 acylphosphatase like domain K08M3_RS17335 PF00581 Rhodanese-like domain K08M3_RS17340 PF00561 alpha/beta hydrolase fold K08M3_RS17345 PF07943 Penicillin-binding protein 5, C-terminal domain K08M3_RS17345 PF00768 D-alanyl-D-alanine carboxypeptidase K08M3_RS17350 PF00686 Starch binding domain K08M3_RS17350 PF00128 Alpha amylase, catalytic domain K08M3_RS17355 PF12833 Helix-turn-helix domain K08M3_RS17355 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term K08M3_RS17360 PF00881 Nitroreductase family K08M3_RS17370 PF03466 LysR substrate binding domain K08M3_RS17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS17375 PF09905 DNA-binding protein VF530 K08M3_RS17385 PF00970 Oxidoreductase FAD-binding domain K08M3_RS17385 PF00175 Oxidoreductase NAD-binding domain K08M3_RS17395 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K08M3_RS17400 PF01594 AI-2E family transporter K08M3_RS17410 PF13533 Biotin-lipoyl like K08M3_RS17425 PF04632 Fusaric acid resistance protein family K08M3_RS17435 PF00892 EamA-like transporter family K08M3_RS17440 PF03466 LysR substrate binding domain K08M3_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS17445 PF07690 Major Facilitator Superfamily K08M3_RS17455 PF00583 Acetyltransferase (GNAT) family K08M3_RS17465 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS17465 PF00072 Response regulator receiver domain K08M3_RS17470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS17470 PF00672 HAMP domain K08M3_RS17470 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS17485 PF00923 Transaldolase/Fructose-6-phosphate aldolase K08M3_RS17490 PF04055 Radical SAM superfamily K08M3_RS17495 PF01228 Glycine radical K08M3_RS17495 PF02901 Pyruvate formate lyase-like K08M3_RS17515 PF08000 Bacterial PH domain K08M3_RS17530 PF13677 Membrane MotB of proton-channel complex MotA/MotB K08M3_RS17530 PF00691 OmpA family K08M3_RS17535 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS17540 PF04542 Sigma-70 region 2 K08M3_RS17540 PF04545 Sigma-70, region 4 K08M3_RS17545 PF03748 Flagellar basal body-associated protein FliL K08M3_RS17560 PF02561 Flagellar protein FliS K08M3_RS17565 PF02465 Flagellar hook-associated protein 2 N-terminus K08M3_RS17565 PF07196 Flagellin hook IN motif K08M3_RS17565 PF07195 Flagellar hook-associated protein 2 C-terminus K08M3_RS17575 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS17575 PF00700 Bacterial flagellin C-terminal helical region K08M3_RS17585 PF00771 FHIPEP family K08M3_RS17590 PF01312 FlhB HrpN YscU SpaS Family K08M3_RS17595 PF01311 Bacterial export proteins, family 1 K08M3_RS17600 PF01313 Bacterial export proteins, family 3 K08M3_RS17605 PF00813 FliP family K08M3_RS17610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K08M3_RS17625 PF00158 Sigma-54 interaction domain K08M3_RS17625 PF00072 Response regulator receiver domain K08M3_RS17625 PF02954 Bacterial regulatory protein, Fis family K08M3_RS17630 PF02049 Flagellar hook-basal body complex protein FliE K08M3_RS17635 PF01514 Secretory protein of YscJ/FliF family K08M3_RS17635 PF08345 Flagellar M-ring protein C-terminal K08M3_RS17640 PF14841 FliG middle domain K08M3_RS17640 PF01706 FliG C-terminal domain K08M3_RS17640 PF14842 FliG N-terminal domain K08M3_RS17650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M3_RS17650 PF18269 T3SS EscN ATPase C-terminal domain K08M3_RS17665 PF03466 LysR substrate binding domain K08M3_RS17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS17700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M3_RS17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS17705 PF03466 LysR substrate binding domain K08M3_RS17725 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS17725 PF00072 Response regulator receiver domain K08M3_RS17730 PF13426 PAS domain K08M3_RS17730 PF08448 PAS fold K08M3_RS17730 PF00072 Response regulator receiver domain K08M3_RS17730 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS17735 PF00080 Copper/zinc superoxide dismutase (SODC) K08M3_RS17750 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS17750 PF00563 EAL domain K08M3_RS17750 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS17750 PF13188 PAS domain K08M3_RS17755 PF00155 Aminotransferase class I and II K08M3_RS17760 PF00107 Zinc-binding dehydrogenase K08M3_RS17760 PF08240 Alcohol dehydrogenase GroES-like domain K08M3_RS17790 PF00194 Eukaryotic-type carbonic anhydrase K08M3_RS17795 PF00924 Mechanosensitive ion channel K08M3_RS17805 PF01070 FMN-dependent dehydrogenase K08M3_RS17810 PF02652 L-lactate permease K08M3_RS17815 PF03466 LysR substrate binding domain K08M3_RS17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS17820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M3_RS17820 PF00326 Prolyl oligopeptidase family K08M3_RS17825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS17825 PF00005 ABC transporter K08M3_RS17835 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M3_RS17835 PF13654 AAA domain K08M3_RS17840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS17840 PF00672 HAMP domain K08M3_RS17840 PF12729 Four helix bundle sensory module for signal transduction K08M3_RS17845 PF13609 Gram-negative porin K08M3_RS17850 PF12945 Flagellar protein YcgR K08M3_RS17850 PF07238 PilZ domain K08M3_RS17865 PF00583 Acetyltransferase (GNAT) family K08M3_RS17870 PF12838 4Fe-4S dicluster domain K08M3_RS17870 PF12800 4Fe-4S binding domain K08M3_RS17875 PF13237 4Fe-4S dicluster domain K08M3_RS17875 PF12801 4Fe-4S binding domain K08M3_RS17895 PF00005 ABC transporter K08M3_RS17895 PF12558 ATP-binding cassette cobalt transporter K08M3_RS17900 PF07155 ECF-type riboflavin transporter, S component K08M3_RS17905 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS17905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS17910 PF11742 Protein of unknown function (DUF3302) K08M3_RS17915 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS17930 PF01048 Phosphorylase superfamily K08M3_RS17935 PF08349 Protein of unknown function (DUF1722) K08M3_RS17940 PF13411 MerR HTH family regulatory protein K08M3_RS17945 PF00875 DNA photolyase K08M3_RS17945 PF03441 FAD binding domain of DNA photolyase K08M3_RS17950 PF03734 L,D-transpeptidase catalytic domain K08M3_RS17950 PF17969 L,D-transpeptidase C-terminal domain K08M3_RS17950 PF01476 LysM domain K08M3_RS17960 PF00270 DEAD/DEAH box helicase K08M3_RS17960 PF00271 Helicase conserved C-terminal domain K08M3_RS17965 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M3_RS17965 PF00326 Prolyl oligopeptidase family K08M3_RS17970 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS17970 PF00593 TonB dependent receptor K08M3_RS17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS17990 PF00672 HAMP domain K08M3_RS17995 PF12849 PBP superfamily domain K08M3_RS18000 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS18005 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS18010 PF00005 ABC transporter K08M3_RS18025 PF13519 von Willebrand factor type A domain K08M3_RS18030 PF13519 von Willebrand factor type A domain K08M3_RS18040 PF01882 Protein of unknown function DUF58 K08M3_RS18045 PF07726 ATPase family associated with various cellular activities (AAA) K08M3_RS18045 PF17863 AAA lid domain K08M3_RS18050 PF02743 Cache domain K08M3_RS18050 PF00672 HAMP domain K08M3_RS18050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS18060 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS18065 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS18075 PF00005 ABC transporter K08M3_RS18075 PF00664 ABC transporter transmembrane region K08M3_RS18080 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS18090 PF01032 FecCD transport family K08M3_RS18095 PF01497 Periplasmic binding protein K08M3_RS18100 PF00005 ABC transporter K08M3_RS18105 PF00593 TonB dependent receptor K08M3_RS18105 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS18110 PF00664 ABC transporter transmembrane region K08M3_RS18110 PF00005 ABC transporter K08M3_RS18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS18115 PF02702 Osmosensitive K+ channel His kinase sensor domain K08M3_RS18115 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS18115 PF13493 Domain of unknown function (DUF4118) K08M3_RS18120 PF00072 Response regulator receiver domain K08M3_RS18120 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS18125 PF02254 TrkA-N domain K08M3_RS18125 PF02080 TrkA-C domain K08M3_RS18130 PF02386 Cation transport protein K08M3_RS18135 PF03466 LysR substrate binding domain K08M3_RS18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS18140 PF02028 BCCT, betaine/carnitine/choline family transporter K08M3_RS18145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) K08M3_RS18145 PF00355 Rieske [2Fe-2S] domain K08M3_RS18150 PF00171 Aldehyde dehydrogenase family K08M3_RS18155 PF18113 Rubredoxin binding C-terminal domain K08M3_RS18155 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS18160 PF01266 FAD dependent oxidoreductase K08M3_RS18170 PF00127 Copper binding proteins, plastocyanin/azurin family K08M3_RS18175 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS18185 PF00158 Sigma-54 interaction domain K08M3_RS18185 PF01590 GAF domain K08M3_RS18190 PF00301 Rubredoxin K08M3_RS18190 PF00753 Metallo-beta-lactamase superfamily K08M3_RS18190 PF00258 Flavodoxin K08M3_RS18195 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS18195 PF18113 Rubredoxin binding C-terminal domain K08M3_RS18205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M3_RS18205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M3_RS18210 PF06628 Catalase-related immune-responsive K08M3_RS18210 PF00199 Catalase K08M3_RS18215 PF13417 Glutathione S-transferase, N-terminal domain K08M3_RS18220 PF00107 Zinc-binding dehydrogenase K08M3_RS18220 PF16884 N-terminal domain of oxidoreductase K08M3_RS18225 PF16925 Tetracyclin repressor-like, C-terminal domain K08M3_RS18225 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS18230 PF04266 ASCH domain K08M3_RS18260 PF13439 Glycosyltransferase Family 4 K08M3_RS18260 PF00534 Glycosyl transferases group 1 K08M3_RS18270 PF02706 Chain length determinant protein K08M3_RS18270 PF13807 G-rich domain on putative tyrosine kinase K08M3_RS18270 PF13614 AAA domain K08M3_RS18285 PF02397 Bacterial sugar transferase K08M3_RS18290 PF08402 TOBE domain K08M3_RS18290 PF00005 ABC transporter K08M3_RS18295 PF01547 Bacterial extracellular solute-binding protein K08M3_RS18300 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS18300 PF14785 Maltose transport system permease protein MalF P2 domain K08M3_RS18305 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS18335 PF05661 Protein of unknown function (DUF808) K08M3_RS18340 PF01979 Amidohydrolase family K08M3_RS18350 PF01679 Proteolipid membrane potential modulator K08M3_RS18355 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M3_RS18355 PF03473 MOSC domain K08M3_RS18355 PF03476 MOSC N-terminal beta barrel domain K08M3_RS18355 PF03473 MOSC domain K08M3_RS18355 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M3_RS18355 PF03476 MOSC N-terminal beta barrel domain K08M3_RS18360 PF02540 NAD synthase K08M3_RS18365 PF01467 Cytidylyltransferase-like K08M3_RS18405 PF00005 ABC transporter K08M3_RS18410 PF01032 FecCD transport family K08M3_RS18420 PF02472 Biopolymer transport protein ExbD/TolR K08M3_RS18425 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS18430 PF03544 Gram-negative bacterial TonB protein C-terminal K08M3_RS18435 PF04055 Radical SAM superfamily K08M3_RS18440 PF06228 Haem utilisation ChuX/HutX K08M3_RS18445 PF01243 Pyridoxamine 5'-phosphate oxidase K08M3_RS18455 PF01584 CheW-like domain K08M3_RS18455 PF00072 Response regulator receiver domain K08M3_RS18465 PF01554 MatE K08M3_RS18470 PF00005 ABC transporter K08M3_RS18470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS18475 PF00005 ABC transporter K08M3_RS18475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS18480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS18485 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS18490 PF00455 DeoR C terminal sensor domain K08M3_RS18490 PF08220 DeoR-like helix-turn-helix domain K08M3_RS18495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M3_RS18495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M3_RS18500 PF17042 Nucleotide-binding C-terminal domain K08M3_RS18500 PF07005 Sugar-binding N-terminal domain K08M3_RS18505 PF00596 Class II Aldolase and Adducin N-terminal domain K08M3_RS18510 PF01261 Xylose isomerase-like TIM barrel K08M3_RS18515 PF01370 NAD dependent epimerase/dehydratase family K08M3_RS18520 PF02447 GntP family permease K08M3_RS18525 PF02583 Metal-sensitive transcriptional repressor K08M3_RS18530 PF03824 High-affinity nickel-transport protein K08M3_RS18535 PF00672 HAMP domain K08M3_RS18535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS18535 PF02743 Cache domain K08M3_RS18540 PF03466 LysR substrate binding domain K08M3_RS18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS18545 PF17848 Acetyl-coA carboxylase zinc finger domain K08M3_RS18545 PF01039 Carboxyl transferase domain K08M3_RS18555 PF04151 Bacterial pre-peptidase C-terminal domain K08M3_RS18555 PF08453 Peptidase family M9 N-terminal K08M3_RS18555 PF01752 Collagenase K08M3_RS18565 PF02627 Carboxymuconolactone decarboxylase family K08M3_RS18570 PF13411 MerR HTH family regulatory protein K08M3_RS18575 PF00128 Alpha amylase, catalytic domain K08M3_RS18590 PF00999 Sodium/hydrogen exchanger family K08M3_RS18590 PF02254 TrkA-N domain K08M3_RS18595 PF02525 Flavodoxin-like fold K08M3_RS18600 PF00582 Universal stress protein family K08M3_RS18605 PF12848 ABC transporter K08M3_RS18605 PF00005 ABC transporter K08M3_RS18605 PF16326 ABC transporter C-terminal domain K08M3_RS18610 PF00326 Prolyl oligopeptidase family K08M3_RS18610 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M3_RS18620 PF13533 Biotin-lipoyl like K08M3_RS18625 PF00873 AcrB/AcrD/AcrF family K08M3_RS18630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M3_RS18640 PF13302 Acetyltransferase (GNAT) domain K08M3_RS18650 PF17151 Periplasmic sensor domain K08M3_RS18650 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS18665 PF00873 AcrB/AcrD/AcrF family K08M3_RS18670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS18685 PF12838 4Fe-4S dicluster domain K08M3_RS18685 PF01568 Molydopterin dinucleotide binding domain K08M3_RS18685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS18685 PF00384 Molybdopterin oxidoreductase K08M3_RS18685 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K08M3_RS18700 PF00005 ABC transporter K08M3_RS18710 PF01418 Helix-turn-helix domain, rpiR family K08M3_RS18710 PF02685 Glucokinase K08M3_RS18710 PF01380 SIS domain K08M3_RS18720 PF07969 Amidohydrolase family K08M3_RS18730 PF00474 Sodium:solute symporter family K08M3_RS18735 PF00294 pfkB family carbohydrate kinase K08M3_RS18740 PF01081 KDPG and KHG aldolase K08M3_RS18745 PF02838 Glycosyl hydrolase family 20, domain 2 K08M3_RS18745 PF00728 Glycosyl hydrolase family 20, catalytic domain K08M3_RS18750 PF10282 Lactonase, 7-bladed beta-propeller K08M3_RS18755 PF01042 Endoribonuclease L-PSP K08M3_RS18760 PF02567 Phenazine biosynthesis-like protein K08M3_RS18765 PF01161 Phosphatidylethanolamine-binding protein K08M3_RS18775 PF01758 Sodium Bile acid symporter family K08M3_RS18790 PF01638 HxlR-like helix-turn-helix K08M3_RS18810 PF03466 LysR substrate binding domain K08M3_RS18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS18815 PF00248 Aldo/keto reductase family K08M3_RS18820 PF03928 Haem-degrading K08M3_RS18840 PF03222 Tryptophan/tyrosine permease family K08M3_RS18850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS18850 PF00672 HAMP domain K08M3_RS18850 PF02743 Cache domain K08M3_RS18855 PF07670 Nucleoside recognition K08M3_RS18875 PF01476 LysM domain K08M3_RS18875 PF08525 Opacity-associated protein A N-terminal motif K08M3_RS18875 PF01551 Peptidase family M23 K08M3_RS18880 PF08447 PAS fold K08M3_RS18880 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS18880 PF00563 EAL domain K08M3_RS18880 PF08448 PAS fold K08M3_RS18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS18885 PF03466 LysR substrate binding domain K08M3_RS18890 PF07690 Major Facilitator Superfamily K08M3_RS18905 PF00462 Glutaredoxin K08M3_RS18910 PF00892 EamA-like transporter family K08M3_RS18925 PF01557 Fumarylacetoacetate (FAA) hydrolase family K08M3_RS18945 PF01810 LysE type translocator K08M3_RS18955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M3_RS18955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M3_RS18955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M3_RS18955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M3_RS18960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K08M3_RS18960 PF02790 Cytochrome C oxidase subunit II, transmembrane domain K08M3_RS18965 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M3_RS18970 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 K08M3_RS18975 PF00510 Cytochrome c oxidase subunit III K08M3_RS18995 PF02628 Cytochrome oxidase assembly protein K08M3_RS19000 PF01040 UbiA prenyltransferase family K08M3_RS19005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M3_RS19005 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M3_RS19015 PF05736 OprF membrane domain K08M3_RS19015 PF00691 OmpA family K08M3_RS19035 PF00313 'Cold-shock' DNA-binding domain K08M3_RS19040 PF03889 Alternative ribosome-rescue factor A K08M3_RS19045 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS19050 PF04539 Sigma-70 region 3 K08M3_RS19050 PF00140 Sigma-70 factor, region 1.2 K08M3_RS19050 PF04542 Sigma-70 region 2 K08M3_RS19050 PF04545 Sigma-70, region 4 K08M3_RS19060 PF00664 ABC transporter transmembrane region K08M3_RS19060 PF00005 ABC transporter K08M3_RS19065 PF00664 ABC transporter transmembrane region K08M3_RS19065 PF00005 ABC transporter K08M3_RS19070 PF02321 Outer membrane efflux protein K08M3_RS19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS19075 PF00072 Response regulator receiver domain K08M3_RS19080 PF13533 Biotin-lipoyl like K08M3_RS19100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS19100 PF00672 HAMP domain K08M3_RS19100 PF17200 Single Cache domain 2 K08M3_RS19105 PF00210 Ferritin-like domain K08M3_RS19115 PF07995 Glucose / Sorbosone dehydrogenase K08M3_RS19120 PF00465 Iron-containing alcohol dehydrogenase K08M3_RS19130 PF00892 EamA-like transporter family K08M3_RS19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS19140 PF03466 LysR substrate binding domain K08M3_RS19150 PF00501 AMP-binding enzyme K08M3_RS19150 PF13193 AMP-binding enzyme C-terminal domain K08M3_RS19155 PF00351 Biopterin-dependent aromatic amino acid hydroxylase K08M3_RS19160 PF01329 Pterin 4 alpha carbinolamine dehydratase K08M3_RS19180 PF12843 Putative quorum-sensing-regulated virulence factor K08M3_RS19200 PF00271 Helicase conserved C-terminal domain K08M3_RS19200 PF00270 DEAD/DEAH box helicase K08M3_RS19205 PF09905 DNA-binding protein VF530 K08M3_RS19215 PF00291 Pyridoxal-phosphate dependent enzyme K08M3_RS19225 PF00313 'Cold-shock' DNA-binding domain K08M3_RS19235 PF01470 Pyroglutamyl peptidase K08M3_RS19245 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M3_RS19245 PF07683 Cobalamin synthesis protein cobW C-terminal domain K08M3_RS19250 PF00270 DEAD/DEAH box helicase K08M3_RS19250 PF00271 Helicase conserved C-terminal domain K08M3_RS19270 PF12792 CSS motif domain associated with EAL K08M3_RS19270 PF00563 EAL domain K08M3_RS19275 PF00005 ABC transporter K08M3_RS19280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS19280 PF12729 Four helix bundle sensory module for signal transduction K08M3_RS19280 PF00672 HAMP domain K08M3_RS19290 PF01575 MaoC like domain K08M3_RS19295 PF12849 PBP superfamily domain K08M3_RS19305 PF12833 Helix-turn-helix domain K08M3_RS19310 PF08206 Ribonuclease B OB domain K08M3_RS19310 PF00773 RNB domain K08M3_RS19310 PF00575 S1 RNA binding domain K08M3_RS19315 PF00270 DEAD/DEAH box helicase K08M3_RS19315 PF00271 Helicase conserved C-terminal domain K08M3_RS19315 PF03880 DbpA RNA binding domain K08M3_RS19330 PF00871 Acetokinase family K08M3_RS19335 PF03466 LysR substrate binding domain K08M3_RS19335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS19340 PF12146 Serine aminopeptidase, S33 K08M3_RS19345 PF12146 Serine aminopeptidase, S33 K08M3_RS19360 PF01925 Sulfite exporter TauE/SafE K08M3_RS19380 PF01979 Amidohydrolase family K08M3_RS19385 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS19390 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M3_RS19390 PF07683 Cobalamin synthesis protein cobW C-terminal domain K08M3_RS19395 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M3_RS19400 PF01551 Peptidase family M23 K08M3_RS19400 PF08525 Opacity-associated protein A N-terminal motif K08M3_RS19400 PF01476 LysM domain K08M3_RS19410 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M3_RS19410 PF07683 Cobalamin synthesis protein cobW C-terminal domain K08M3_RS19415 PF07683 Cobalamin synthesis protein cobW C-terminal domain K08M3_RS19415 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M3_RS19420 PF01258 Prokaryotic dksA/traR C4-type zinc finger K08M3_RS19430 PF01914 MarC family integral membrane protein K08M3_RS19440 PF13426 PAS domain K08M3_RS19440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS19440 PF08447 PAS fold K08M3_RS19450 PF00682 HMGL-like K08M3_RS19455 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS19460 PF01039 Carboxyl transferase domain K08M3_RS19465 PF02770 Acyl-CoA dehydrogenase, middle domain K08M3_RS19465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M3_RS19465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M3_RS19470 PF09278 MerR, DNA binding K08M3_RS19470 PF00376 MerR family regulatory protein K08M3_RS19475 PF02803 Thiolase, C-terminal domain K08M3_RS19475 PF00108 Thiolase, N-terminal domain K08M3_RS19480 PF00171 Aldehyde dehydrogenase family K08M3_RS19485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M3_RS19485 PF02770 Acyl-CoA dehydrogenase, middle domain K08M3_RS19485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M3_RS19490 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS19495 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS19500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M3_RS19500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M3_RS19510 PF06481 COX Aromatic Rich Motif K08M3_RS19510 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K08M3_RS19515 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M3_RS19520 PF00510 Cytochrome c oxidase subunit III K08M3_RS19530 PF01040 UbiA prenyltransferase family K08M3_RS19535 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS19535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M3_RS19550 PF00171 Aldehyde dehydrogenase family K08M3_RS19560 PF02028 BCCT, betaine/carnitine/choline family transporter K08M3_RS19590 PF00005 ABC transporter K08M3_RS19595 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS19600 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS19605 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS19615 PF03466 LysR substrate binding domain K08M3_RS19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS19630 PF03466 LysR substrate binding domain K08M3_RS19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS19640 PF00766 Electron transfer flavoprotein FAD-binding domain K08M3_RS19640 PF01012 Electron transfer flavoprotein domain K08M3_RS19645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K08M3_RS19645 PF00364 Biotin-requiring enzyme K08M3_RS19645 PF02817 e3 binding domain K08M3_RS19650 PF02779 Transketolase, pyrimidine binding domain K08M3_RS19650 PF02780 Transketolase, C-terminal domain K08M3_RS19655 PF00676 Dehydrogenase E1 component K08M3_RS19670 PF00012 Hsp70 protein K08M3_RS19675 PF04314 Copper chaperone PCu(A)C K08M3_RS19700 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS19700 PF00072 Response regulator receiver domain K08M3_RS19720 PF01483 Proprotein convertase P-domain K08M3_RS19720 PF00082 Subtilase family K08M3_RS19730 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS19740 PF03222 Tryptophan/tyrosine permease family K08M3_RS19750 PF01568 Molydopterin dinucleotide binding domain K08M3_RS19750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS19750 PF00384 Molybdopterin oxidoreductase K08M3_RS19755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M3_RS19755 PF14824 Sirohaem biosynthesis protein central K08M3_RS19755 PF10414 Sirohaem synthase dimerisation region K08M3_RS19760 PF02885 Glycosyl transferase family, helical bundle domain K08M3_RS19760 PF00591 Glycosyl transferase family, a/b domain K08M3_RS19765 PF01738 Dienelactone hydrolase family K08M3_RS19770 PF03861 ANTAR domain K08M3_RS19770 PF00072 Response regulator receiver domain K08M3_RS19780 PF00005 ABC transporter K08M3_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS19790 PF00005 ABC transporter K08M3_RS19795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M3_RS19795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M3_RS19795 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS19795 PF13806 Rieske-like [2Fe-2S] domain K08M3_RS19795 PF18267 Rubredoxin NAD+ reductase C-terminal domain K08M3_RS19795 PF04324 BFD-like [2Fe-2S] binding domain K08M3_RS19825 PF00072 Response regulator receiver domain K08M3_RS19825 PF00211 Adenylate and Guanylate cyclase catalytic domain K08M3_RS19845 PF00069 Protein kinase domain K08M3_RS19845 PF03793 PASTA domain K08M3_RS19860 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K08M3_RS19865 PF00691 OmpA family K08M3_RS19865 PF13677 Membrane MotB of proton-channel complex MotA/MotB K08M3_RS19870 PF14331 ImcF-related N-terminal domain K08M3_RS19870 PF06761 Intracellular multiplication and human macrophage-killing K08M3_RS19870 PF06744 Type VI secretion protein IcmF C-terminal K08M3_RS19890 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 K08M3_RS19895 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath K08M3_RS19900 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath K08M3_RS19915 PF05947 Type VI secretion system, TssF K08M3_RS19925 PF07724 AAA domain (Cdc48 subfamily) K08M3_RS19925 PF17871 AAA lid domain K08M3_RS19925 PF10431 C-terminal, D2-small domain, of ClpB protein K08M3_RS19925 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS19935 PF06715 Gp5 C-terminal repeat (3 copies) K08M3_RS19935 PF04717 Type VI secretion system, phage-baseplate injector K08M3_RS19950 PF00149 Calcineurin-like phosphoesterase K08M3_RS19950 PF12320 Type 5 capsule protein repressor C-terminal domain K08M3_RS19955 PF13476 AAA domain K08M3_RS19965 PF08212 Lipocalin-like domain K08M3_RS19975 PF03606 C4-dicarboxylate anaerobic carrier K08M3_RS19985 PF01212 Beta-eliminating lyase K08M3_RS19995 PF07728 AAA domain (dynein-related subfamily) K08M3_RS19995 PF17868 AAA lid domain K08M3_RS19995 PF12592 Protein of unknown function (DUF3763) K08M3_RS20000 PF05762 VWA domain containing CoxE-like protein K08M3_RS20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS20015 PF03466 LysR substrate binding domain K08M3_RS20020 PF09330 D-lactate dehydrogenase, membrane binding K08M3_RS20020 PF01565 FAD binding domain K08M3_RS20035 PF01168 Alanine racemase, N-terminal domain K08M3_RS20035 PF00842 Alanine racemase, C-terminal domain K08M3_RS20040 PF00672 HAMP domain K08M3_RS20040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS20070 PF02811 PHP domain K08M3_RS20070 PF00929 Exonuclease K08M3_RS20070 PF14579 Helix-hairpin-helix motif K08M3_RS20070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M3_RS20070 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M3_RS20115 PF02511 Thymidylate synthase complementing protein K08M3_RS20120 PF03477 ATP cone domain K08M3_RS20120 PF13597 Anaerobic ribonucleoside-triphosphate reductase K08M3_RS20290 PF00128 Alpha amylase, catalytic domain K08M3_RS20290 PF09154 Domain of unknown function (DUF1939) K08M3_RS20320 PF00296 Luciferase-like monooxygenase K08M3_RS20325 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS20325 PF00563 EAL domain K08M3_RS20325 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS20335 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS20335 PF00563 EAL domain K08M3_RS20335 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS20345 PF14760 Rnk N-terminus K08M3_RS20345 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M3_RS20350 PF18267 Rubredoxin NAD+ reductase C-terminal domain K08M3_RS20350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M3_RS20350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M3_RS20350 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS20350 PF04324 BFD-like [2Fe-2S] binding domain K08M3_RS20355 PF13806 Rieske-like [2Fe-2S] domain K08M3_RS20360 PF01226 Formate/nitrite transporter K08M3_RS20365 PF10414 Sirohaem synthase dimerisation region K08M3_RS20365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M3_RS20365 PF14824 Sirohaem biosynthesis protein central K08M3_RS20380 PF03605 Anaerobic c4-dicarboxylate membrane transporter K08M3_RS20395 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS20395 PF00593 TonB dependent receptor K08M3_RS20405 PF13302 Acetyltransferase (GNAT) domain K08M3_RS20410 PF11756 Nitrous oxide-stimulated promoter K08M3_RS20415 PF07690 Major Facilitator Superfamily K08M3_RS20420 PF00085 Thioredoxin K08M3_RS20425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K08M3_RS20425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K08M3_RS20445 PF01238 Phosphomannose isomerase type I K08M3_RS20450 PF07690 Major Facilitator Superfamily K08M3_RS20455 PF07730 Histidine kinase K08M3_RS20455 PF05231 MASE1 K08M3_RS20455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS20460 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS20460 PF00072 Response regulator receiver domain K08M3_RS20465 PF07690 Major Facilitator Superfamily K08M3_RS20470 PF02634 FdhD/NarQ family K08M3_RS20475 PF03466 LysR substrate binding domain K08M3_RS20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS20485 PF00384 Molybdopterin oxidoreductase K08M3_RS20500 PF02567 Phenazine biosynthesis-like protein K08M3_RS20505 PF01177 Asp/Glu/Hydantoin racemase K08M3_RS20510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M3_RS20510 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M3_RS20520 PF04143 Sulphur transport K08M3_RS20535 PF03477 ATP cone domain K08M3_RS20535 PF13597 Anaerobic ribonucleoside-triphosphate reductase K08M3_RS20545 PF01554 MatE K08M3_RS20550 PF12852 Cupin K08M3_RS20550 PF12833 Helix-turn-helix domain K08M3_RS20555 PF00155 Aminotransferase class I and II K08M3_RS20560 PF08443 RimK-like ATP-grasp domain K08M3_RS20560 PF18030 RimK PreATP-grasp domain K08M3_RS20570 PF04076 Bacterial OB fold (BOF) protein K08M3_RS20575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K08M3_RS20575 PF07685 CobB/CobQ-like glutamine amidotransferase domain K08M3_RS20585 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS20590 PF00005 ABC transporter K08M3_RS20590 PF03459 TOBE domain K08M3_RS20600 PF00360 Phytochrome region K08M3_RS20600 PF01590 GAF domain K08M3_RS20600 PF00563 EAL domain K08M3_RS20600 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS20605 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS20620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K08M3_RS20620 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch K08M3_RS20620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K08M3_RS20625 PF02233 NAD(P) transhydrogenase beta subunit K08M3_RS20635 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS20635 PF00072 Response regulator receiver domain K08M3_RS20650 PF03701 Uncharacterised protein family (UPF0181) K08M3_RS20655 PF00582 Universal stress protein family K08M3_RS20665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS20665 PF03466 LysR substrate binding domain K08M3_RS20815 PF01253 Translation initiation factor SUI1 K08M3_RS20825 PF01820 D-ala D-ala ligase N-terminus K08M3_RS20825 PF07478 D-ala D-ala ligase C-terminus K08M3_RS20830 PF05036 Sporulation related domain K08M3_RS20840 PF13607 Succinyl-CoA ligase like flavodoxin domain K08M3_RS20840 PF00583 Acetyltransferase (GNAT) family K08M3_RS20840 PF13380 CoA binding domain K08M3_RS20845 PF03466 LysR substrate binding domain K08M3_RS20845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS20850 PF04886 PT repeat K08M3_RS20850 PF00593 TonB dependent receptor K08M3_RS20850 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS20855 PF16363 GDP-mannose 4,6 dehydratase K08M3_RS20860 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS20860 PF05231 MASE1 K08M3_RS20860 PF08448 PAS fold K08M3_RS20860 PF00563 EAL domain K08M3_RS20860 PF08447 PAS fold K08M3_RS20860 PF13426 PAS domain K08M3_RS20865 PF03746 LamB/YcsF family K08M3_RS20870 PF02682 Carboxyltransferase domain, subdomain C and D K08M3_RS20875 PF02626 Carboxyltransferase domain, subdomain A and B K08M3_RS20890 PF00005 ABC transporter K08M3_RS20895 PF13472 GDSL-like Lipase/Acylhydrolase family K08M3_RS20900 PF12241 Trans-2-enoyl-CoA reductase catalytic region K08M3_RS20900 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K08M3_RS20900 PF07055 Enoyl reductase FAD binding domain K08M3_RS20905 PF13188 PAS domain K08M3_RS20905 PF00563 EAL domain K08M3_RS20905 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS20905 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS20915 PF00226 DnaJ domain K08M3_RS20915 PF00684 DnaJ central domain K08M3_RS20915 PF01556 DnaJ C terminal domain K08M3_RS20940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M3_RS20940 PF12793 Sugar transport-related sRNA regulator N-term K08M3_RS20950 PF03061 Thioesterase superfamily K08M3_RS20965 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M3_RS20970 PF12262 Bacterial virulence factor lipase N-terminal K08M3_RS20990 PF03741 Integral membrane protein TerC family K08M3_RS20995 PF00149 Calcineurin-like phosphoesterase K08M3_RS20995 PF02872 5'-nucleotidase, C-terminal domain K08M3_RS21000 PF11398 Protein of unknown function (DUF2813) K08M3_RS21005 PF06496 Protein of unknown function (DUF1097) K08M3_RS21010 PF03466 LysR substrate binding domain K08M3_RS21010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS21015 PF01226 Formate/nitrite transporter K08M3_RS21020 PF04264 YceI-like domain K08M3_RS21025 PF01292 Prokaryotic cytochrome b561 K08M3_RS21045 PF00270 DEAD/DEAH box helicase K08M3_RS21045 PF00271 Helicase conserved C-terminal domain K08M3_RS21050 PF04336 Acyl carrier protein phosphodiesterase K08M3_RS21060 PF00672 HAMP domain K08M3_RS21060 PF12729 Four helix bundle sensory module for signal transduction K08M3_RS21060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS21070 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS21085 PF00294 pfkB family carbohydrate kinase K08M3_RS21090 PF01268 Formate--tetrahydrofolate ligase K08M3_RS21095 PF00483 Nucleotidyl transferase K08M3_RS21100 PF00704 Glycosyl hydrolases family 18 K08M3_RS21100 PF06483 Chitinase C K08M3_RS21110 PF12833 Helix-turn-helix domain K08M3_RS21110 PF06719 AraC-type transcriptional regulator N-terminus K08M3_RS21115 PF00465 Iron-containing alcohol dehydrogenase K08M3_RS21125 PF00005 ABC transporter K08M3_RS21130 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS21135 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M3_RS21140 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS21145 PF00989 PAS fold K08M3_RS21145 PF01590 GAF domain K08M3_RS21145 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS21145 PF00563 EAL domain K08M3_RS21160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M3_RS21160 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS21165 PF00381 PTS HPr component phosphorylation site K08M3_RS21165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M3_RS21170 PF00294 pfkB family carbohydrate kinase K08M3_RS21175 PF02378 Phosphotransferase system, EIIC K08M3_RS21175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M3_RS21185 PF00873 AcrB/AcrD/AcrF family K08M3_RS21205 PF01571 Aminomethyltransferase folate-binding domain K08M3_RS21205 PF08669 Glycine cleavage T-protein C-terminal barrel domain K08M3_RS21215 PF00464 Serine hydroxymethyltransferase K08M3_RS21220 PF01597 Glycine cleavage H-protein K08M3_RS21225 PF02347 Glycine cleavage system P-protein K08M3_RS21230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M3_RS21235 PF16123 Hydroxyacylglutathione hydrolase C-terminus K08M3_RS21235 PF00753 Metallo-beta-lactamase superfamily K08M3_RS21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS21240 PF03466 LysR substrate binding domain K08M3_RS21245 PF00892 EamA-like transporter family K08M3_RS21250 PF02627 Carboxymuconolactone decarboxylase family K08M3_RS21255 PF12833 Helix-turn-helix domain K08M3_RS21280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M3_RS21280 PF14579 Helix-hairpin-helix motif K08M3_RS21280 PF02811 PHP domain K08M3_RS21280 PF11490 DNA polymerase III polC-type N-terminus II K08M3_RS21280 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M3_RS21280 PF00929 Exonuclease K08M3_RS21285 PF00664 ABC transporter transmembrane region K08M3_RS21285 PF00005 ABC transporter K08M3_RS21305 PF02253 Phospholipase A1 K08M3_RS21315 PF00376 MerR family regulatory protein K08M3_RS21315 PF09278 MerR, DNA binding K08M3_RS21320 PF01327 Polypeptide deformylase K08M3_RS21355 PF03448 MgtE intracellular N domain K08M3_RS21355 PF00571 CBS domain K08M3_RS21355 PF01769 Divalent cation transporter K08M3_RS21375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M3_RS21380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M3_RS21390 PF01757 Acyltransferase family K08M3_RS21400 PF09722 Protein of unknown function (DUF2384) K08M3_RS21405 PF00141 Peroxidase K08M3_RS21410 PF13187 4Fe-4S dicluster domain K08M3_RS21410 PF01645 Conserved region in glutamate synthase K08M3_RS21420 PF00171 Aldehyde dehydrogenase family K08M3_RS21435 PF00892 EamA-like transporter family K08M3_RS21440 PF00893 Small Multidrug Resistance protein K08M3_RS21460 PF00892 EamA-like transporter family K08M3_RS21470 PF08334 Type II secretion system (T2SS), protein G K08M3_RS21470 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS21475 PF01584 CheW-like domain K08M3_RS21475 PF00072 Response regulator receiver domain K08M3_RS21485 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS21485 PF00072 Response regulator receiver domain K08M3_RS21495 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS21500 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS21500 PF00072 Response regulator receiver domain K08M3_RS21505 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS21505 PF00563 EAL domain K08M3_RS21505 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS21505 PF13188 PAS domain K08M3_RS21510 PF00072 Response regulator receiver domain K08M3_RS21510 PF09456 RcsC Alpha-Beta-Loop (ABL) K08M3_RS21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS21510 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS21515 PF01926 50S ribosome-binding GTPase K08M3_RS21520 PF00155 Aminotransferase class I and II K08M3_RS21525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS21525 PF00072 Response regulator receiver domain K08M3_RS21535 PF00583 Acetyltransferase (GNAT) family K08M3_RS21535 PF00814 Glycoprotease family K08M3_RS21545 PF03606 C4-dicarboxylate anaerobic carrier K08M3_RS21560 PF08774 VRR-NUC domain K08M3_RS21560 PF18081 Fanconi anemia-associated nuclease SAP domain K08M3_RS21575 PF04076 Bacterial OB fold (BOF) protein K08M3_RS21580 PF00781 Diacylglycerol kinase catalytic domain K08M3_RS21585 PF03466 LysR substrate binding domain K08M3_RS21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS21590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M3_RS21605 PF00092 von Willebrand factor type A domain K08M3_RS21620 PF07726 ATPase family associated with various cellular activities (AAA) K08M3_RS21620 PF17863 AAA lid domain K08M3_RS21625 PF13186 Iron-sulfur cluster-binding domain K08M3_RS21625 PF04055 Radical SAM superfamily K08M3_RS21630 PF16385 Domain of unknown function K08M3_RS21630 PF00884 Sulfatase K08M3_RS21635 PF03466 LysR substrate binding domain K08M3_RS21635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS21640 PF00884 Sulfatase K08M3_RS21645 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS21645 PF00072 Response regulator receiver domain K08M3_RS21660 PF00072 Response regulator receiver domain K08M3_RS21660 PF01627 Hpt domain K08M3_RS21660 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS21660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS21660 PF00672 HAMP domain K08M3_RS21665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M3_RS21670 PF02142 MGS-like domain K08M3_RS21675 PF13361 UvrD-like helicase C-terminal domain K08M3_RS21675 PF00580 UvrD/REP helicase N-terminal domain K08M3_RS21675 PF12462 DNA helicase IV / RNA helicase N terminal K08M3_RS21680 PF12805 FUSC-like inner membrane protein yccS K08M3_RS21715 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS21715 PF00593 TonB dependent receptor K08M3_RS21725 PF13411 MerR HTH family regulatory protein K08M3_RS21730 PF00005 ABC transporter K08M3_RS21735 PF01032 FecCD transport family K08M3_RS21740 PF01032 FecCD transport family K08M3_RS21745 PF01497 Periplasmic binding protein K08M3_RS21755 PF01048 Phosphorylase superfamily K08M3_RS21760 PF04973 Nicotinamide mononucleotide transporter K08M3_RS21770 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS21775 PF00294 pfkB family carbohydrate kinase K08M3_RS21780 PF13407 Periplasmic binding protein domain K08M3_RS21785 PF02653 Branched-chain amino acid transport system / permease component K08M3_RS21790 PF00005 ABC transporter K08M3_RS21795 PF05025 RbsD / FucU transport protein family K08M3_RS21800 PF00563 EAL domain K08M3_RS21800 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS21845 PF04116 Fatty acid hydroxylase superfamily K08M3_RS21855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K08M3_RS21855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K08M3_RS21865 PF00072 Response regulator receiver domain K08M3_RS21865 PF09308 LuxQ, periplasmic K08M3_RS21865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS21865 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS21870 PF00034 Cytochrome c K08M3_RS21870 PF03150 Di-haem cytochrome c peroxidase K08M3_RS21880 PF01145 SPFH domain / Band 7 family K08M3_RS21880 PF16200 C-terminal region of band_7 K08M3_RS21890 PF00881 Nitroreductase family K08M3_RS21895 PF00571 CBS domain K08M3_RS21895 PF00005 ABC transporter K08M3_RS21900 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS21905 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K08M3_RS21910 PF00732 GMC oxidoreductase K08M3_RS21910 PF05199 GMC oxidoreductase K08M3_RS21915 PF00171 Aldehyde dehydrogenase family K08M3_RS21920 PF13977 BetI-type transcriptional repressor, C-terminal K08M3_RS21920 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS21925 PF00072 Response regulator receiver domain K08M3_RS21925 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS21935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M3_RS21935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M3_RS21945 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS21950 PF02770 Acyl-CoA dehydrogenase, middle domain K08M3_RS21950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M3_RS21950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M3_RS21955 PF00171 Aldehyde dehydrogenase family K08M3_RS21960 PF02803 Thiolase, C-terminal domain K08M3_RS21960 PF00108 Thiolase, N-terminal domain K08M3_RS21965 PF00376 MerR family regulatory protein K08M3_RS21965 PF09278 MerR, DNA binding K08M3_RS21970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M3_RS21970 PF02770 Acyl-CoA dehydrogenase, middle domain K08M3_RS21970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M3_RS21975 PF01039 Carboxyl transferase domain K08M3_RS21980 PF00378 Enoyl-CoA hydratase/isomerase K08M3_RS21985 PF00289 Biotin carboxylase, N-terminal domain K08M3_RS21985 PF02785 Biotin carboxylase C-terminal domain K08M3_RS21985 PF18140 Propionyl-coenzyme A carboxylase BT domain K08M3_RS21985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K08M3_RS21985 PF00364 Biotin-requiring enzyme K08M3_RS21990 PF00682 HMGL-like K08M3_RS22000 PF12794 Mechanosensitive ion channel inner membrane domain 1 K08M3_RS22000 PF12795 Mechanosensitive ion channel porin domain K08M3_RS22000 PF00924 Mechanosensitive ion channel K08M3_RS22005 PF12464 Maltose acetyltransferase K08M3_RS22005 PF14602 Hexapeptide repeat of succinyl-transferase K08M3_RS22010 PF00155 Aminotransferase class I and II K08M3_RS22010 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS22015 PF01654 Cytochrome bd terminal oxidase subunit I K08M3_RS22020 PF02322 Cytochrome bd terminal oxidase subunit II K08M3_RS22030 PF02567 Phenazine biosynthesis-like protein K08M3_RS22040 PF13087 AAA domain K08M3_RS22040 PF13086 AAA domain K08M3_RS22040 PF13195 Protein of unknown function (DUF4011) K08M3_RS22040 PF13086 AAA domain K08M3_RS22040 PF13087 AAA domain K08M3_RS22040 PF13195 Protein of unknown function (DUF4011) K08M3_RS22045 PF03466 LysR substrate binding domain K08M3_RS22045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS22050 PF03306 Alpha-acetolactate decarboxylase K08M3_RS22055 PF00205 Thiamine pyrophosphate enzyme, central domain K08M3_RS22055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M3_RS22055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M3_RS22065 PF05724 Thiopurine S-methyltransferase (TPMT) K08M3_RS22070 PF14535 AMP-binding enzyme C-terminal domain K08M3_RS22070 PF00501 AMP-binding enzyme K08M3_RS22075 PF00005 ABC transporter K08M3_RS22095 PF00501 AMP-binding enzyme K08M3_RS22100 PF12399 Branched-chain amino acid ATP-binding cassette transporter K08M3_RS22100 PF00005 ABC transporter K08M3_RS22115 PF01012 Electron transfer flavoprotein domain K08M3_RS22120 PF01012 Electron transfer flavoprotein domain K08M3_RS22120 PF00766 Electron transfer flavoprotein FAD-binding domain K08M3_RS22125 PF00501 AMP-binding enzyme K08M3_RS22125 PF13193 AMP-binding enzyme C-terminal domain K08M3_RS22130 PF00367 phosphotransferase system, EIIB K08M3_RS22130 PF02378 Phosphotransferase system, EIIC K08M3_RS22135 PF02056 Family 4 glycosyl hydrolase K08M3_RS22135 PF11975 Family 4 glycosyl hydrolase C-terminal domain K08M3_RS22140 PF07702 UTRA domain K08M3_RS22140 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS22145 PF03334 Na+/H+ antiporter subunit K08M3_RS22150 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) K08M3_RS22155 PF01899 Na+/H+ ion antiporter subunit K08M3_RS22160 PF00361 Proton-conducting membrane transporter K08M3_RS22165 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K08M3_RS22170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K08M3_RS22170 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter K08M3_RS22170 PF00361 Proton-conducting membrane transporter K08M3_RS22170 PF13244 Domain of unknown function (DUF4040) K08M3_RS22180 PF00582 Universal stress protein family K08M3_RS22185 PF00106 short chain dehydrogenase K08M3_RS22190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS22190 PF03466 LysR substrate binding domain K08M3_RS22200 PF07690 Major Facilitator Superfamily K08M3_RS22235 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K08M3_RS22265 PF01037 Lrp/AsnC ligand binding domain K08M3_RS22275 PF05947 Type VI secretion system, TssF K08M3_RS22285 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath K08M3_RS22300 PF00069 Protein kinase domain K08M3_RS22325 PF04717 Type VI secretion system, phage-baseplate injector K08M3_RS22330 PF05638 Type VI secretion system effector, Hcp K08M3_RS22335 PF07724 AAA domain (Cdc48 subfamily) K08M3_RS22335 PF00004 ATPase family associated with various cellular activities (AAA) K08M3_RS22335 PF17871 AAA lid domain K08M3_RS22335 PF10431 C-terminal, D2-small domain, of ClpB protein K08M3_RS22340 PF00158 Sigma-54 interaction domain K08M3_RS22340 PF02954 Bacterial regulatory protein, Fis family K08M3_RS22365 PF08525 Opacity-associated protein A N-terminal motif K08M3_RS22365 PF01476 LysM domain K08M3_RS22365 PF01551 Peptidase family M23 K08M3_RS22370 PF00132 Bacterial transferase hexapeptide (six repeats) K08M3_RS22375 PF00144 Beta-lactamase K08M3_RS22380 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS22400 PF00551 Formyl transferase K08M3_RS22400 PF02911 Formyl transferase, C-terminal domain K08M3_RS22400 PF01370 NAD dependent epimerase/dehydratase family K08M3_RS22420 PF01565 FAD binding domain K08M3_RS22420 PF08031 Berberine and berberine like K08M3_RS22430 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family K08M3_RS22435 PF00478 IMP dehydrogenase / GMP reductase domain K08M3_RS22440 PF01256 Carbohydrate kinase K08M3_RS22440 PF03853 YjeF-related protein N-terminus K08M3_RS22450 PF00072 Response regulator receiver domain K08M3_RS22455 PF00248 Aldo/keto reductase family K08M3_RS22470 PF00654 Voltage gated chloride channel K08M3_RS22480 PF01227 GTP cyclohydrolase I K08M3_RS22485 PF00994 Probable molybdopterin binding domain K08M3_RS22485 PF03454 MoeA C-terminal region (domain IV) K08M3_RS22485 PF03453 MoeA N-terminal region (domain I and II) K08M3_RS22490 PF00899 ThiF family K08M3_RS22505 PF00581 Rhodanese-like domain K08M3_RS22525 PF00923 Transaldolase/Fructose-6-phosphate aldolase K08M3_RS22530 PF02779 Transketolase, pyrimidine binding domain K08M3_RS22530 PF02780 Transketolase, C-terminal domain K08M3_RS22530 PF00456 Transketolase, thiamine diphosphate binding domain K08M3_RS22535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS22535 PF08447 PAS fold K08M3_RS22540 PF07690 Major Facilitator Superfamily K08M3_RS22545 PF00793 DAHP synthetase I family K08M3_RS22555 PF00691 OmpA family K08M3_RS22555 PF01389 OmpA-like transmembrane domain K08M3_RS22560 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS22565 PF00472 RF-1 domain K08M3_RS22570 PF00672 HAMP domain K08M3_RS22570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS22570 PF12729 Four helix bundle sensory module for signal transduction K08M3_RS22575 PF00873 AcrB/AcrD/AcrF family K08M3_RS22580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS22585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M3_RS22590 PF01546 Peptidase family M20/M25/M40 K08M3_RS22590 PF07687 Peptidase dimerisation domain K08M3_RS22605 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS22605 PF00072 Response regulator receiver domain K08M3_RS22610 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term K08M3_RS22610 PF00672 HAMP domain K08M3_RS22610 PF07730 Histidine kinase K08M3_RS22610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS22615 PF12838 4Fe-4S dicluster domain K08M3_RS22615 PF13187 4Fe-4S dicluster domain K08M3_RS22625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS22625 PF01568 Molydopterin dinucleotide binding domain K08M3_RS22625 PF00384 Molybdopterin oxidoreductase K08M3_RS22630 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) K08M3_RS22635 PF03264 NapC/NirT cytochrome c family, N-terminal region K08M3_RS22645 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K08M3_RS22655 PF00108 Thiolase, N-terminal domain K08M3_RS22655 PF02803 Thiolase, C-terminal domain K08M3_RS22660 PF00106 short chain dehydrogenase K08M3_RS22665 PF01810 LysE type translocator K08M3_RS22675 PF02355 Protein export membrane protein K08M3_RS22675 PF07549 SecD/SecF GG Motif K08M3_RS22680 PF07549 SecD/SecF GG Motif K08M3_RS22680 PF13721 SecD export protein N-terminal TM region K08M3_RS22680 PF02355 Protein export membrane protein K08M3_RS22710 PF01037 Lrp/AsnC ligand binding domain K08M3_RS22730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS22730 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS22735 PF01047 MarR family K08M3_RS22740 PF00072 Response regulator receiver domain K08M3_RS22740 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS22740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS22740 PF09308 LuxQ, periplasmic K08M3_RS22745 PF13407 Periplasmic binding protein domain K08M3_RS22755 PF01541 GIY-YIG catalytic domain K08M3_RS22760 PF04337 Protein of unknown function, DUF480 K08M3_RS22770 PF04363 Protein of unknown function (DUF496) K08M3_RS22775 PF01554 MatE K08M3_RS22780 PF01627 Hpt domain K08M3_RS22780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS22780 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS22780 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K08M3_RS22780 PF00072 Response regulator receiver domain K08M3_RS22780 PF00672 HAMP domain K08M3_RS22785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M3_RS22785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS22805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS22805 PF03466 LysR substrate binding domain K08M3_RS22815 PF13520 Amino acid permease K08M3_RS22820 PF00155 Aminotransferase class I and II K08M3_RS22820 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS22830 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS22830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS22830 PF00672 HAMP domain K08M3_RS22830 PF16527 Two-component sensor protein CpxA, periplasmic domain K08M3_RS22835 PF00072 Response regulator receiver domain K08M3_RS22835 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS22850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term K08M3_RS22850 PF12833 Helix-turn-helix domain K08M3_RS22860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS22860 PF00529 HlyD membrane-fusion protein of T1SS K08M3_RS22865 PF03109 ABC1 family K08M3_RS22870 PF01769 Divalent cation transporter K08M3_RS22870 PF03448 MgtE intracellular N domain K08M3_RS22870 PF00571 CBS domain K08M3_RS22875 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin K08M3_RS22880 PF07969 Amidohydrolase family K08M3_RS22885 PF01966 HD domain K08M3_RS22895 PF07690 Major Facilitator Superfamily K08M3_RS22905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K08M3_RS22910 PF00255 Glutathione peroxidase K08M3_RS22925 PF01323 DSBA-like thioredoxin domain K08M3_RS22940 PF00072 Response regulator receiver domain K08M3_RS22940 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS22945 PF00672 HAMP domain K08M3_RS22945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS22945 PF16527 Two-component sensor protein CpxA, periplasmic domain K08M3_RS22945 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS22955 PF01219 Prokaryotic diacylglycerol kinase K08M3_RS22960 PF00884 Sulfatase K08M3_RS22960 PF08019 Phosphoethanolamine transferase EptA/EptB K08M3_RS22965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K08M3_RS22980 PF01734 Patatin-like phospholipase K08M3_RS22985 PF02678 Pirin K08M3_RS22985 PF05726 Pirin C-terminal cupin domain K08M3_RS22990 PF00313 'Cold-shock' DNA-binding domain K08M3_RS23005 PF00962 Adenosine/AMP deaminase K08M3_RS23010 PF08534 Redoxin K08M3_RS23010 PF00462 Glutaredoxin K08M3_RS23020 PF07943 Penicillin-binding protein 5, C-terminal domain K08M3_RS23020 PF00768 D-alanyl-D-alanine carboxypeptidase K08M3_RS23030 PF02798 Glutathione S-transferase, N-terminal domain K08M3_RS23040 PF08244 Glycosyl hydrolases family 32 C terminal K08M3_RS23040 PF00251 Glycosyl hydrolases family 32 N-terminal domain K08M3_RS23045 PF00294 pfkB family carbohydrate kinase K08M3_RS23050 PF02378 Phosphotransferase system, EIIC K08M3_RS23050 PF00367 phosphotransferase system, EIIB K08M3_RS23055 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS23060 PF11471 Maltoporin periplasmic N-terminal extension K08M3_RS23060 PF02264 LamB porin K08M3_RS23100 PF00106 short chain dehydrogenase K08M3_RS23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23105 PF03466 LysR substrate binding domain K08M3_RS23110 PF12833 Helix-turn-helix domain K08M3_RS23110 PF01497 Periplasmic binding protein K08M3_RS23115 PF00155 Aminotransferase class I and II K08M3_RS23140 PF00270 DEAD/DEAH box helicase K08M3_RS23140 PF00271 Helicase conserved C-terminal domain K08M3_RS23150 PF03466 LysR substrate binding domain K08M3_RS23150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23155 PF03466 LysR substrate binding domain K08M3_RS23165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M3_RS23170 PF00107 Zinc-binding dehydrogenase K08M3_RS23170 PF08240 Alcohol dehydrogenase GroES-like domain K08M3_RS23190 PF00155 Aminotransferase class I and II K08M3_RS23190 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS23195 PF00557 Metallopeptidase family M24 K08M3_RS23195 PF01321 Creatinase/Prolidase N-terminal domain K08M3_RS23200 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M3_RS23205 PF01037 Lrp/AsnC ligand binding domain K08M3_RS23210 PF00171 Aldehyde dehydrogenase family K08M3_RS23215 PF00202 Aminotransferase class-III K08M3_RS23220 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) K08M3_RS23235 PF03466 LysR substrate binding domain K08M3_RS23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23240 PF00709 Adenylosuccinate synthetase K08M3_RS23245 PF00710 Asparaginase, N-terminal K08M3_RS23245 PF17763 Glutaminase/Asparaginase C-terminal domain K08M3_RS23250 PF03618 Kinase/pyrophosphorylase K08M3_RS23255 PF02896 PEP-utilising enzyme, TIM barrel domain K08M3_RS23255 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K08M3_RS23255 PF00391 PEP-utilising enzyme, mobile domain K08M3_RS23265 PF00072 Response regulator receiver domain K08M3_RS23265 PF00196 Bacterial regulatory proteins, luxR family K08M3_RS23270 PF00579 tRNA synthetases class I (W and Y) K08M3_RS23275 PF13416 Bacterial extracellular solute-binding protein K08M3_RS23290 PF02836 Glycosyl hydrolases family 2, TIM barrel domain K08M3_RS23290 PF00703 Glycosyl hydrolases family 2 K08M3_RS23290 PF02837 Glycosyl hydrolases family 2, sugar binding domain K08M3_RS23290 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 K08M3_RS23295 PF02028 BCCT, betaine/carnitine/choline family transporter K08M3_RS23300 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS23300 PF07702 UTRA domain K08M3_RS23325 PF00005 ABC transporter K08M3_RS23325 PF08402 TOBE domain K08M3_RS23345 PF00873 AcrB/AcrD/AcrF family K08M3_RS23365 PF00873 AcrB/AcrD/AcrF family K08M3_RS23375 PF13091 PLD-like domain K08M3_RS23380 PF00398 Ribosomal RNA adenine dimethylase K08M3_RS23400 PF00376 MerR family regulatory protein K08M3_RS23400 PF09278 MerR, DNA binding K08M3_RS23415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23415 PF03466 LysR substrate binding domain K08M3_RS23425 PF13378 Enolase C-terminal domain-like K08M3_RS23425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K08M3_RS23435 PF00679 Elongation factor G C-terminus K08M3_RS23435 PF14492 Elongation Factor G, domain II K08M3_RS23435 PF03764 Elongation factor G, domain IV K08M3_RS23435 PF00009 Elongation factor Tu GTP binding domain K08M3_RS23435 PF03144 Elongation factor Tu domain 2 K08M3_RS23460 PF02001 Protein of unknown function DUF134 K08M3_RS23465 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS23470 PF00005 ABC transporter K08M3_RS23470 PF00571 CBS domain K08M3_RS23475 PF17185 NlpE C-terminal OB domain K08M3_RS23475 PF04170 NlpE N-terminal domain K08M3_RS23480 PF06629 MltA-interacting protein MipA K08M3_RS23495 PF03466 LysR substrate binding domain K08M3_RS23495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family K08M3_RS23520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain K08M3_RS23530 PF00857 Isochorismatase family K08M3_RS23545 PF08220 DeoR-like helix-turn-helix domain K08M3_RS23545 PF00455 DeoR C terminal sensor domain K08M3_RS23550 PF01641 SelR domain K08M3_RS23550 PF01625 Peptide methionine sulfoxide reductase K08M3_RS23555 PF03060 Nitronate monooxygenase K08M3_RS23560 PF13520 Amino acid permease K08M3_RS23565 PF05985 Ethanolamine ammonia-lyase light chain (EutC) K08M3_RS23570 PF06751 Ethanolamine ammonia lyase large subunit (EutB) K08M3_RS23575 PF12833 Helix-turn-helix domain K08M3_RS23580 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS23580 PF08359 YsiA-like protein, C-terminal region K08M3_RS23595 PF03466 LysR substrate binding domain K08M3_RS23595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23600 PF01810 LysE type translocator K08M3_RS23610 PF00118 TCP-1/cpn60 chaperonin family K08M3_RS23615 PF00166 Chaperonin 10 Kd subunit K08M3_RS23625 PF00581 Rhodanese-like domain K08M3_RS23640 PF01070 FMN-dependent dehydrogenase K08M3_RS23670 PF01625 Peptide methionine sulfoxide reductase K08M3_RS23670 PF01641 SelR domain K08M3_RS23675 PF03060 Nitronate monooxygenase K08M3_RS23680 PF13520 Amino acid permease K08M3_RS23685 PF05985 Ethanolamine ammonia-lyase light chain (EutC) K08M3_RS23695 PF12833 Helix-turn-helix domain K08M3_RS23700 PF08359 YsiA-like protein, C-terminal region K08M3_RS23700 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS23715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23715 PF03466 LysR substrate binding domain K08M3_RS23720 PF01810 LysE type translocator K08M3_RS23730 PF00118 TCP-1/cpn60 chaperonin family K08M3_RS23735 PF00166 Chaperonin 10 Kd subunit K08M3_RS23745 PF00581 Rhodanese-like domain K08M3_RS23760 PF01070 FMN-dependent dehydrogenase K08M3_RS23780 PF00669 Bacterial flagellin N-terminal helical region K08M3_RS23785 PF00460 Flagella basal body rod protein K08M3_RS23785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS23790 PF10135 Rod binding protein K08M3_RS23790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K08M3_RS23795 PF02119 Flagellar P-ring protein K08M3_RS23800 PF02107 Flagellar L-ring protein K08M3_RS23805 PF00460 Flagella basal body rod protein K08M3_RS23805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS23810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS23810 PF00460 Flagella basal body rod protein K08M3_RS23815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS23815 PF00460 Flagella basal body rod protein K08M3_RS23815 PF07559 Flagellar basal body protein FlaE K08M3_RS23820 PF13861 FlgD Tudor-like domain K08M3_RS23820 PF13860 FlgD Ig-like domain K08M3_RS23820 PF03963 Flagellar hook capping protein - N-terminal region K08M3_RS23825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M3_RS23825 PF00460 Flagella basal body rod protein K08M3_RS23830 PF00460 Flagella basal body rod protein K08M3_RS23850 PF01464 Transglycosylase SLT domain K08M3_RS23855 PF00133 tRNA synthetases class I (I, L, M and V) K08M3_RS23855 PF08264 Anticodon-binding domain of tRNA K08M3_RS23875 PF03315 Serine dehydratase beta chain K08M3_RS23875 PF03313 Serine dehydratase alpha chain K08M3_RS23885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23885 PF03466 LysR substrate binding domain K08M3_RS23890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS23890 PF03466 LysR substrate binding domain K08M3_RS23895 PF01389 OmpA-like transmembrane domain K08M3_RS23895 PF00691 OmpA family K08M3_RS23900 PF00246 Zinc carboxypeptidase K08M3_RS23900 PF18027 Cytosolic carboxypeptidase N-terminal domain K08M3_RS23905 PF01266 FAD dependent oxidoreductase K08M3_RS23915 PF04393 Protein of unknown function (DUF535) K08M3_RS23930 PF07702 UTRA domain K08M3_RS23930 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS23935 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS23940 PF00005 ABC transporter K08M3_RS23955 PF00266 Aminotransferase class-V K08M3_RS23960 PF00202 Aminotransferase class-III K08M3_RS23965 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS23970 PF00356 Bacterial regulatory proteins, lacI family K08M3_RS23975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M3_RS23985 PF03611 PTS system sugar-specific permease component K08M3_RS23995 PF00082 Subtilase family K08M3_RS23995 PF05922 Peptidase inhibitor I9 K08M3_RS24000 PF00657 GDSL-like Lipase/Acylhydrolase K08M3_RS24005 PF00440 Bacterial regulatory proteins, tetR family K08M3_RS24015 PF02321 Outer membrane efflux protein K08M3_RS24020 PF00005 ABC transporter K08M3_RS24020 PF12704 MacB-like periplasmic core domain K08M3_RS24020 PF02687 FtsX-like permease family K08M3_RS24025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M3_RS24030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M3_RS24035 PF00194 Eukaryotic-type carbonic anhydrase K08M3_RS24040 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) K08M3_RS24055 PF13419 Haloacid dehalogenase-like hydrolase K08M3_RS24060 PF03466 LysR substrate binding domain K08M3_RS24060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS24095 PF14602 Hexapeptide repeat of succinyl-transferase K08M3_RS24095 PF12464 Maltose acetyltransferase K08M3_RS24100 PF02566 OsmC-like protein K08M3_RS24105 PF01625 Peptide methionine sulfoxide reductase K08M3_RS24105 PF01641 SelR domain K08M3_RS24120 PF04244 Deoxyribodipyrimidine photo-lyase-related protein K08M3_RS24125 PF00875 DNA photolyase K08M3_RS24125 PF03441 FAD binding domain of DNA photolyase K08M3_RS24130 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS24145 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS24145 PF05230 MASE2 domain K08M3_RS24160 PF01773 Na+ dependent nucleoside transporter N-terminus K08M3_RS24160 PF07662 Na+ dependent nucleoside transporter C-terminus K08M3_RS24160 PF07670 Nucleoside recognition K08M3_RS24180 PF01212 Beta-eliminating lyase K08M3_RS24185 PF03116 NQR2, RnfD, RnfE family K08M3_RS24190 PF01654 Cytochrome bd terminal oxidase subunit I K08M3_RS24195 PF02322 Cytochrome bd terminal oxidase subunit II K08M3_RS24215 PF00182 Chitinase class I K08M3_RS24220 PF01266 FAD dependent oxidoreductase K08M3_RS24235 PF05525 Branched-chain amino acid transport protein K08M3_RS24240 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS24245 PF02954 Bacterial regulatory protein, Fis family K08M3_RS24245 PF00072 Response regulator receiver domain K08M3_RS24245 PF00158 Sigma-54 interaction domain K08M3_RS24250 PF00072 Response regulator receiver domain K08M3_RS24250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS24250 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS24250 PF08448 PAS fold K08M3_RS24250 PF13426 PAS domain K08M3_RS24255 PF00232 Glycosyl hydrolase family 1 K08M3_RS24275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS24275 PF03466 LysR substrate binding domain K08M3_RS24285 PF12706 Beta-lactamase superfamily domain K08M3_RS24300 PF18030 RimK PreATP-grasp domain K08M3_RS24300 PF08443 RimK-like ATP-grasp domain K08M3_RS24305 PF18030 RimK PreATP-grasp domain K08M3_RS24305 PF08443 RimK-like ATP-grasp domain K08M3_RS24310 PF00753 Metallo-beta-lactamase superfamily K08M3_RS24315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K08M3_RS24315 PF17810 Arginine decarboxylase helical bundle domain K08M3_RS24315 PF17944 Arginine decarboxylase C-terminal helical extension K08M3_RS24320 PF00491 Arginase family K08M3_RS24325 PF07690 Major Facilitator Superfamily K08M3_RS24330 PF00326 Prolyl oligopeptidase family K08M3_RS24330 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M3_RS24345 PF00950 ABC 3 transport family K08M3_RS24350 PF00005 ABC transporter K08M3_RS24355 PF01297 Zinc-uptake complex component A periplasmic K08M3_RS24395 PF02472 Biopolymer transport protein ExbD/TolR K08M3_RS24400 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS24405 PF01618 MotA/TolQ/ExbB proton channel family K08M3_RS24415 PF07715 TonB-dependent Receptor Plug Domain K08M3_RS24415 PF00593 TonB dependent receptor K08M3_RS24420 PF00672 HAMP domain K08M3_RS24420 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS24420 PF16750 Sensor domain of 2-component histidine kinase K08M3_RS24420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS24425 PF00486 Transcriptional regulatory protein, C terminal K08M3_RS24425 PF00072 Response regulator receiver domain K08M3_RS24430 PF03009 Glycerophosphoryl diester phosphodiesterase family K08M3_RS24440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M3_RS24440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M3_RS24445 PF10928 Protein of unknown function (DUF2810) K08M3_RS24500 PF04013 Putative SAM-dependent RNA methyltransferase K08M3_RS24505 PF01523 Putative modulator of DNA gyrase K08M3_RS24510 PF01523 Putative modulator of DNA gyrase K08M3_RS24515 PF08543 Phosphomethylpyrimidine kinase K08M3_RS24520 PF00005 ABC transporter K08M3_RS24525 PF00528 Binding-protein-dependent transport system inner membrane component K08M3_RS24530 PF09084 NMT1/THI5 like K08M3_RS24535 PF03070 TENA/THI-4/PQQC family K08M3_RS24540 PF02110 Hydroxyethylthiazole kinase family K08M3_RS24545 PF02581 Thiamine monophosphate synthase K08M3_RS24555 PF01568 Molydopterin dinucleotide binding domain K08M3_RS24555 PF18364 Molybdopterin oxidoreductase N-terminal domain K08M3_RS24555 PF00384 Molybdopterin oxidoreductase K08M3_RS24560 PF03264 NapC/NirT cytochrome c family, N-terminal region K08M3_RS24565 PF13302 Acetyltransferase (GNAT) domain K08M3_RS24585 PF00583 Acetyltransferase (GNAT) family K08M3_RS24605 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS24605 PF00155 Aminotransferase class I and II K08M3_RS24610 PF02595 Glycerate kinase family K08M3_RS24615 PF02447 GntP family permease K08M3_RS24620 PF05651 Putative sugar diacid recognition K08M3_RS24620 PF17853 GGDEF-like domain K08M3_RS24620 PF13556 PucR C-terminal helix-turn-helix domain K08M3_RS24655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M3_RS24660 PF12706 Beta-lactamase superfamily domain K08M3_RS24670 PF07690 Major Facilitator Superfamily K08M3_RS24675 PF13533 Biotin-lipoyl like K08M3_RS24680 PF03922 OmpW family K08M3_RS24685 PF13599 Pentapeptide repeats (9 copies) K08M3_RS24705 PF01037 Lrp/AsnC ligand binding domain K08M3_RS24710 PF01810 LysE type translocator K08M3_RS24715 PF08021 Siderophore-interacting FAD-binding domain K08M3_RS24715 PF04954 Siderophore-interacting protein K08M3_RS24720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS24720 PF03466 LysR substrate binding domain K08M3_RS24725 PF00797 N-acetyltransferase K08M3_RS24730 PF08240 Alcohol dehydrogenase GroES-like domain K08M3_RS24730 PF00107 Zinc-binding dehydrogenase K08M3_RS24735 PF00756 Putative esterase K08M3_RS24745 PF17152 Periplasmic sensor domain K08M3_RS24745 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS24760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS24760 PF03466 LysR substrate binding domain K08M3_RS24775 PF00849 RNA pseudouridylate synthase K08M3_RS24780 PF01554 MatE K08M3_RS24785 PF00563 EAL domain K08M3_RS24785 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS24785 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS24795 PF06865 Pyrimidine/purine nucleoside phosphorylase K08M3_RS24805 PF00704 Glycosyl hydrolases family 18 K08M3_RS24805 PF08329 Chitinase A, N-terminal domain K08M3_RS24810 PF12697 Alpha/beta hydrolase family K08M3_RS24825 PF03600 Citrate transporter K08M3_RS24835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K08M3_RS24845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M3_RS24845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K08M3_RS24850 PF12833 Helix-turn-helix domain K08M3_RS24850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M3_RS24850 PF02805 Metal binding domain of Ada K08M3_RS24850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K08M3_RS24860 PF07681 DoxX K08M3_RS24865 PF02678 Pirin K08M3_RS24865 PF17954 Quercetinase C-terminal cupin domain K08M3_RS24870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M3_RS24870 PF03466 LysR substrate binding domain K08M3_RS24885 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K08M3_RS24895 PF03616 Sodium/glutamate symporter K08M3_RS24900 PF00155 Aminotransferase class I and II K08M3_RS24900 PF00392 Bacterial regulatory proteins, gntR family K08M3_RS24905 PF00005 ABC transporter K08M3_RS24915 PF03616 Sodium/glutamate symporter K08M3_RS24935 PF00672 HAMP domain K08M3_RS24935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M3_RS24935 PF17200 Single Cache domain 2 K08M3_RS24940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M3_RS24950 PF04397 LytTr DNA-binding domain K08M3_RS24950 PF00072 Response regulator receiver domain K08M3_RS24955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS24955 PF13492 GAF domain K08M3_RS24955 PF07694 5TMR of 5TMR-LYT K08M3_RS24955 PF06580 Histidine kinase K08M3_RS24975 PF00005 ABC transporter K08M3_RS24985 PF01098 Cell cycle protein K08M3_RS24990 PF01709 Transcriptional regulator K08M3_RS25000 PF00672 HAMP domain K08M3_RS25000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M3_RS25000 PF17149 Periplasmic sensor domain found in signal transduction proteins K08M3_RS25000 PF00072 Response regulator receiver domain K08M3_RS25000 PF01627 Hpt domain K08M3_RS25000 PF00512 His Kinase A (phospho-acceptor) domain K08M3_RS25010 PF00925 GTP cyclohydrolase II K08M3_RS25010 PF08719 Domain of unknown function (DUF1768) K08M3_RS25020 PF00005 ABC transporter K08M3_RS25020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS25025 PF00005 ABC transporter K08M3_RS25025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M3_RS25290 PF05016 ParE toxin of type II toxin-antitoxin system, parDE K08M3_RS25470 PF13662 Toprim domain K08M3_RS25470 PF08275 DNA primase catalytic core, N-terminal domain K08M3_RS25470 PF01807 CHC2 zinc finger K08M3_RS25585 PF01751 Toprim domain K08M3_RS25585 PF01396 Topoisomerase DNA binding C4 zinc finger K08M3_RS25585 PF08272 Topoisomerase I zinc-ribbon-like K08M3_RS25585 PF01131 DNA topoisomerase K08M3_RS25640 PF00437 Type II/IV secretion system protein K08M3_RS25690 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K08M3_RS25690 PF00437 Type II/IV secretion system protein K08M3_RS25700 PF00114 Pilin (bacterial filament) K08M3_RS25700 PF07963 Prokaryotic N-terminal methylation motif K08M3_RS25825 PF00816 H-NS histone family K08M3_RS25865 PF03707 Bacterial signalling protein N terminal repeat K08M3_RS25865 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS25865 PF00563 EAL domain K08M3_RS26095 PF01145 SPFH domain / Band 7 family K08M3_RS26100 PF01145 SPFH domain / Band 7 family K08M3_RS26115 PF13438 Domain of unknown function (DUF4113) K08M3_RS26115 PF00817 impB/mucB/samB family K08M3_RS26115 PF11799 impB/mucB/samB family C-terminal domain K08M3_RS26125 PF07669 Eco57I restriction-modification methylase K08M3_RS26145 PF00563 EAL domain K08M3_RS26145 PF01590 GAF domain K08M3_RS26145 PF00360 Phytochrome region K08M3_RS26145 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS26245 PF13438 Domain of unknown function (DUF4113) K08M3_RS26245 PF00817 impB/mucB/samB family K08M3_RS26245 PF11799 impB/mucB/samB family C-terminal domain K08M3_RS26290 PF00360 Phytochrome region K08M3_RS26290 PF00563 EAL domain K08M3_RS26290 PF01590 GAF domain K08M3_RS26290 PF00990 Diguanylate cyclase, GGDEF domain K08M3_RS26410 PF01807 CHC2 zinc finger K08M3_RS26410 PF08275 DNA primase catalytic core, N-terminal domain K08M3_RS26410 PF13662 Toprim domain K08M3_RS26525 PF13361 UvrD-like helicase C-terminal domain K08M3_RS26525 PF00580 UvrD/REP helicase N-terminal domain