K08M3_RS00005 SM00382 ATPases associated with a variety of cellular activities K08M3_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain K08M3_RS00010 SM00480 DNA polymerase III beta subunit K08M3_RS00020 SM00387 Histidine kinase-like ATPases K08M3_RS00020 SM00433 TopoisomeraseII K08M3_RS00045 SM00642 Alpha-amylase domain K08M3_RS00085 SM00829 Enoylreductase K08M3_RS00225 SM00382 ATPases associated with a variety of cellular activities K08M3_RS00250 SM00354 helix_turn _helix lactose operon repressor K08M3_RS00315 SM00344 helix_turn_helix ASNC type K08M3_RS00320 SM00052 Putative diguanylate phosphodiesterase K08M3_RS00320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K08M3_RS00320 SM00091 PAS domain K08M3_RS00320 SM00267 diguanylate cyclase K08M3_RS00360 SM00382 ATPases associated with a variety of cellular activities K08M3_RS00365 SM00749 bacterial OsmY and nodulation domain K08M3_RS00385 SM00046 Diacylglycerol kinase catalytic domain (presumed) K08M3_RS00385 SM00195 Dual specificity phosphatase, catalytic domain K08M3_RS00385 SM00404 Protein tyrosine phosphatase, catalytic domain motif K08M3_RS00420 SM00052 Putative diguanylate phosphodiesterase K08M3_RS00420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K08M3_RS00420 SM00091 PAS domain K08M3_RS00420 SM00267 diguanylate cyclase K08M3_RS00480 SM01004 Delta-aminolevulinic acid dehydratase K08M3_RS00495 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K08M3_RS00495 SM00474 3'-5' exonuclease K08M3_RS00495 SM00475 5'-3' exonuclease K08M3_RS00495 SM00482 DNA polymerase A domain K08M3_RS00530 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS00540 SM00052 Putative diguanylate phosphodiesterase K08M3_RS00540 SM00267 diguanylate cyclase K08M3_RS00540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS00545 SM00382 ATPases associated with a variety of cellular activities K08M3_RS00545 SM00448 cheY-homologous receiver domain K08M3_RS00550 SM00091 PAS domain K08M3_RS00550 SM00387 Histidine kinase-like ATPases K08M3_RS00550 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS00560 SM01230 K08M3_RS00560 K08M3_RS00610 SM00363 S4 RNA-binding domain K08M3_RS00625 SM00382 ATPases associated with a variety of cellular activities K08M3_RS00705 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS00705 SM00732 Likely ribonuclease with RNase H fold. K08M3_RS00725 SM00448 cheY-homologous receiver domain K08M3_RS00725 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS00730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS00730 SM00387 Histidine kinase-like ATPases K08M3_RS00730 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS00740 SM00487 DEAD-like helicases superfamily K08M3_RS00740 SM00490 helicase superfamily c-terminal domain K08M3_RS00750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS00750 SM00954 Region found in RelA / SpoT proteins K08M3_RS00755 SM01409 K08M3_RS00755 K08M3_RS00760 SM00072 Guanylate kinase homologues. K08M3_RS00765 SM00028 Tetratricopeptide repeats K08M3_RS00820 SM00382 ATPases associated with a variety of cellular activities K08M3_RS00825 SM00382 ATPases associated with a variety of cellular activities K08M3_RS00870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS00870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS00870 SM01049 K08M3_RS00870 K08M3_RS00895 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain K08M3_RS00895 SM01232 K08M3_RS00895 K08M3_RS00905 SM00672 Putative lipopolysaccharide-modifying enzyme. K08M3_RS01060 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K08M3_RS01060 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K08M3_RS01095 SM00849 Metallo-beta-lactamase superfamily K08M3_RS01095 SM01027 Beta-Casp domain K08M3_RS01140 SM00984 UDP binding domain K08M3_RS01245 SM00448 cheY-homologous receiver domain K08M3_RS01250 SM00091 PAS domain K08M3_RS01250 SM00387 Histidine kinase-like ATPases K08M3_RS01275 SM00764 Citrate lyase ligase C-terminal domain K08M3_RS01315 SM00382 ATPases associated with a variety of cellular activities K08M3_RS01315 SM01086 C-terminal, D2-small domain, of ClpB protein K08M3_RS01330 SM00354 helix_turn _helix lactose operon repressor K08M3_RS01335 SM00487 DEAD-like helicases superfamily K08M3_RS01335 SM00490 helicase superfamily c-terminal domain K08M3_RS01350 SM01403 K08M3_RS01350 K08M3_RS01370 SM01382 K08M3_RS01370 K08M3_RS01370 SM01383 K08M3_RS01370 K08M3_RS01385 SM00322 K homology RNA-binding domain K08M3_RS01405 SM01374 K08M3_RS01405 K08M3_RS01410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K08M3_RS01475 SM00363 S4 RNA-binding domain K08M3_RS01475 SM01390 K08M3_RS01475 K08M3_RS01480 SM00662 RNA polymerases D K08M3_RS01510 SM00487 DEAD-like helicases superfamily K08M3_RS01510 SM00490 helicase superfamily c-terminal domain K08M3_RS01565 SM00382 ATPases associated with a variety of cellular activities K08M3_RS01645 SM00382 ATPases associated with a variety of cellular activities K08M3_RS01745 SM00650 Ribosomal RNA adenine dimethylases K08M3_RS01765 SM00271 DnaJ molecular chaperone homology domain K08M3_RS01785 SM01329 K08M3_RS01785 K08M3_RS01790 SM00917 LeuA allosteric (dimerisation) domain K08M3_RS01805 SM00014 Acid phosphatase homologues K08M3_RS01835 SM00267 diguanylate cyclase K08M3_RS01840 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS01850 SM00420 helix_turn_helix, Deoxyribose operon repressor K08M3_RS01850 SM01134 K08M3_RS01850 K08M3_RS01870 SM01120 K08M3_RS01870 K08M3_RS01900 SM00563 Phosphate acyltransferases K08M3_RS01930 SM00400 zinc finger K08M3_RS01930 SM00493 K08M3_RS01930 K08M3_RS01930 SM00766 DNA primase DnaG DnaB-binding K08M3_RS01955 SM01207 K08M3_RS01955 K08M3_RS01960 SM00905 Dihydroneopterin aldolase K08M3_RS01980 SM00382 ATPases associated with a variety of cellular activities K08M3_RS01995 SM00287 Bacterial SH3 domain homologues K08M3_RS02010 SM00880 K08M3_RS02010 K08M3_RS02010 SM01118 K08M3_RS02010 K08M3_RS02020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS02060 SM00387 Histidine kinase-like ATPases K08M3_RS02060 SM00433 TopoisomeraseII K08M3_RS02065 SM00434 DNA Topoisomerase IV K08M3_RS02070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K08M3_RS02075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K08M3_RS02135 SM00749 bacterial OsmY and nodulation domain K08M3_RS02225 SM00842 Cell division protein FtsA K08M3_RS02230 SM00864 Tubulin/FtsZ family, GTPase domain K08M3_RS02230 SM00865 Tubulin/FtsZ family, C-terminal domain K08M3_RS02245 SM00957 SecA DEAD-like domain K08M3_RS02245 SM00958 SecA preprotein cross-linking domain K08M3_RS02260 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain K08M3_RS02265 SM00851 MGS-like domain K08M3_RS02265 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K08M3_RS02335 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS02340 SM00091 PAS domain K08M3_RS02340 SM00267 diguanylate cyclase K08M3_RS02345 SM00073 Histidine Phosphotransfer domain K08M3_RS02345 SM00091 PAS domain K08M3_RS02345 SM00387 Histidine kinase-like ATPases K08M3_RS02345 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS02345 SM00448 cheY-homologous receiver domain K08M3_RS02355 SM00448 cheY-homologous receiver domain K08M3_RS02355 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS02410 SM00518 AP endonuclease family 2 K08M3_RS02420 SM00986 Uracil DNA glycosylase superfamily K08M3_RS02420 SM00987 UreE urease accessory protein, C-terminal domain K08M3_RS02445 SM00487 DEAD-like helicases superfamily K08M3_RS02445 SM00490 helicase superfamily c-terminal domain K08M3_RS02490 SM00382 ATPases associated with a variety of cellular activities K08M3_RS02510 SM00927 DNA mismatch repair enzyme MutH K08M3_RS02520 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08M3_RS02540 SM01154 K08M3_RS02540 K08M3_RS02555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K08M3_RS02570 SM00904 Riboflavin kinase K08M3_RS02595 SM00226 Low molecular weight phosphatase family K08M3_RS02600 SM00448 cheY-homologous receiver domain K08M3_RS02600 SM00850 LytTr DNA-binding domain K08M3_RS02645 SM00830 Chorismate mutase type II K08M3_RS02660 SM00382 ATPases associated with a variety of cellular activities K08M3_RS02680 SM00830 Chorismate mutase type II K08M3_RS02690 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS02700 SM00363 S4 RNA-binding domain K08M3_RS02710 SM00382 ATPases associated with a variety of cellular activities K08M3_RS02710 SM01086 C-terminal, D2-small domain, of ClpB protein K08M3_RS02795 SM00448 cheY-homologous receiver domain K08M3_RS02795 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS02800 SM00091 PAS domain K08M3_RS02800 SM00387 Histidine kinase-like ATPases K08M3_RS02800 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS02830 SM00382 ATPases associated with a variety of cellular activities K08M3_RS02870 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS02875 SM00020 Trypsin-like serine protease K08M3_RS02890 SM01323 K08M3_RS02890 K08M3_RS02945 SM00271 DnaJ molecular chaperone homology domain K08M3_RS02970 SM00562 K08M3_RS02970 K08M3_RS02980 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS03000 SM00564 beta-propeller repeat K08M3_RS03005 SM00382 ATPases associated with a variety of cellular activities K08M3_RS03025 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS03025 SM01240 K08M3_RS03025 K08M3_RS03040 SM00028 Tetratricopeptide repeats K08M3_RS03105 SM00495 Chitin-binding domain type 3 K08M3_RS03240 SM00271 DnaJ molecular chaperone homology domain K08M3_RS03290 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS03295 SM01211 K08M3_RS03295 K08M3_RS03350 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K08M3_RS03400 SM00861 Transketolase, pyrimidine binding domain K08M3_RS03425 SM00981 K08M3_RS03425 K08M3_RS03450 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K08M3_RS03450 SM00475 5'-3' exonuclease K08M3_RS03460 SM00267 diguanylate cyclase K08M3_RS03465 SM00028 Tetratricopeptide repeats K08M3_RS03495 SM00382 ATPases associated with a variety of cellular activities K08M3_RS03495 SM00930 K08M3_RS03495 K08M3_RS03505 SM00354 helix_turn _helix lactose operon repressor K08M3_RS03515 SM00642 Alpha-amylase domain K08M3_RS03525 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS03540 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS03555 SM00936 Penicillin-binding protein 5, C-terminal domain K08M3_RS03610 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS03610 SM01091 Transporter associated domain K08M3_RS03625 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS03750 SM01400 K08M3_RS03750 K08M3_RS03770 SM00937 K08M3_RS03770 K08M3_RS03805 SM00363 S4 RNA-binding domain K08M3_RS03810 SM00463 Small MutS-related domain K08M3_RS03835 SM01081 Putative carbohydrate binding domain K08M3_RS03915 SM00858 K08M3_RS03915 K08M3_RS03920 SM00260 Two component signalling adaptor domain K08M3_RS03920 SM00448 cheY-homologous receiver domain K08M3_RS03925 SM00138 Methyltransferase, chemotaxis proteins K08M3_RS03970 SM00047 Lysozyme subfamily 2 K08M3_RS04035 SM00771 ZipA, C-terminal domain (FtsZ-binding) K08M3_RS04040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K08M3_RS04040 SM00292 breast cancer carboxy-terminal domain K08M3_RS04040 SM00532 Ligase N family K08M3_RS04060 SM00244 prohibitin homologues K08M3_RS04100 SM00028 Tetratricopeptide repeats K08M3_RS04130 SM00938 Nitrogen regulatory protein P-II K08M3_RS04135 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS04165 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS04170 SM00387 Histidine kinase-like ATPases K08M3_RS04190 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K08M3_RS04300 SM00861 Transketolase, pyrimidine binding domain K08M3_RS04315 SM00881 CoA binding domain K08M3_RS04325 SM00382 ATPases associated with a variety of cellular activities K08M3_RS04335 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS04340 SM00899 K08M3_RS04340 K08M3_RS04365 SM00836 DALR anticodon binding domain K08M3_RS04365 SM01016 Arginyl tRNA synthetase N terminal dom K08M3_RS04380 SM00020 Trypsin-like serine protease K08M3_RS04390 SM00487 DEAD-like helicases superfamily K08M3_RS04390 SM00491 K08M3_RS04390 K08M3_RS04420 SM00474 3'-5' exonuclease K08M3_RS04475 SM00825 Beta-ketoacyl synthase K08M3_RS04480 SM00822 K08M3_RS04480 K08M3_RS04490 SM00825 Beta-ketoacyl synthase K08M3_RS04550 SM00563 Phosphate acyltransferases K08M3_RS04580 SM00487 DEAD-like helicases superfamily K08M3_RS04580 SM00490 helicase superfamily c-terminal domain K08M3_RS04630 SM00382 ATPases associated with a variety of cellular activities K08M3_RS04630 SM00448 cheY-homologous receiver domain K08M3_RS04635 SM00387 Histidine kinase-like ATPases K08M3_RS04635 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS04655 SM00382 ATPases associated with a variety of cellular activities K08M3_RS04655 SM00994 ClpX C4-type zinc finger K08M3_RS04655 SM01086 C-terminal, D2-small domain, of ClpB protein K08M3_RS04660 SM00382 ATPases associated with a variety of cellular activities K08M3_RS04660 SM00464 Found in ATP-dependent protease La (LON) K08M3_RS04665 SM00411 bacterial (prokaryotic) histone like domain K08M3_RS04675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K08M3_RS04685 SM01144 K08M3_RS04685 K08M3_RS04690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS04695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS04725 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K08M3_RS04745 SM00563 Phosphate acyltransferases K08M3_RS04755 SM00978 K08M3_RS04755 K08M3_RS04815 SM00344 helix_turn_helix ASNC type K08M3_RS04845 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS04845 SM00267 diguanylate cyclase K08M3_RS04860 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS04880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS04880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS04930 SM00487 DEAD-like helicases superfamily K08M3_RS04930 SM00490 helicase superfamily c-terminal domain K08M3_RS04930 SM00982 K08M3_RS04930 K08M3_RS04930 SM01058 CarD-like/TRCF domain K08M3_RS04945 SM00382 ATPases associated with a variety of cellular activities K08M3_RS04960 SM00849 Metallo-beta-lactamase superfamily K08M3_RS04965 SM00382 ATPases associated with a variety of cellular activities K08M3_RS04995 SM00763 PrkA AAA domain K08M3_RS05040 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05045 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS05045 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K08M3_RS05060 SM01276 K08M3_RS05060 K08M3_RS05085 SM00491 K08M3_RS05085 K08M3_RS05115 SM00357 Cold shock protein domain K08M3_RS05125 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05125 SM01086 C-terminal, D2-small domain, of ClpB protein K08M3_RS05130 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS05160 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K08M3_RS05160 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K08M3_RS05160 SM00493 K08M3_RS05160 K08M3_RS05195 SM00354 helix_turn _helix lactose operon repressor K08M3_RS05205 SM00448 cheY-homologous receiver domain K08M3_RS05205 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS05290 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K08M3_RS05295 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05350 SM00028 Tetratricopeptide repeats K08M3_RS05385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K08M3_RS05390 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05445 SM00028 Tetratricopeptide repeats K08M3_RS05480 SM00387 Histidine kinase-like ATPases K08M3_RS05480 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS05480 SM00448 cheY-homologous receiver domain K08M3_RS05530 SM00347 helix_turn_helix multiple antibiotic resistance protein K08M3_RS05560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS05585 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K08M3_RS05585 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K08M3_RS05590 SM00344 helix_turn_helix ASNC type K08M3_RS05595 SM00843 K08M3_RS05595 K08M3_RS05605 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05635 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS05635 SM00876 Biotin and Thiamin Synthesis associated domain K08M3_RS05730 SM00528 Domain in histone-like proteins of HNS family K08M3_RS05785 SM00052 Putative diguanylate phosphodiesterase K08M3_RS05800 SM00840 K08M3_RS05800 K08M3_RS05875 SM01131 K08M3_RS05875 K08M3_RS05885 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05890 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05910 SM00382 ATPases associated with a variety of cellular activities K08M3_RS05965 SM00155 Phospholipase D. Active site motifs. K08M3_RS05995 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08M3_RS05995 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06010 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06055 SM00387 Histidine kinase-like ATPases K08M3_RS06060 SM00448 cheY-homologous receiver domain K08M3_RS06060 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS06070 SM00487 DEAD-like helicases superfamily K08M3_RS06070 SM00490 helicase superfamily c-terminal domain K08M3_RS06075 SM00363 S4 RNA-binding domain K08M3_RS06105 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06205 SM00448 cheY-homologous receiver domain K08M3_RS06210 SM00387 Histidine kinase-like ATPases K08M3_RS06230 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06235 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06260 SM00267 diguanylate cyclase K08M3_RS06275 SM00919 Malic enzyme, NAD binding domain K08M3_RS06275 SM01274 K08M3_RS06275 K08M3_RS06280 SM00487 DEAD-like helicases superfamily K08M3_RS06280 SM00490 helicase superfamily c-terminal domain K08M3_RS06365 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS06365 SM00866 K08M3_RS06365 K08M3_RS06380 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K08M3_RS06405 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS06440 SM00873 B3/4 domain K08M3_RS06440 SM00874 tRNA synthetase B5 domain K08M3_RS06440 SM00896 Ferredoxin-fold anticodon binding domain K08M3_RS06450 SM00411 bacterial (prokaryotic) histone like domain K08M3_RS06485 SM00479 K08M3_RS06485 K08M3_RS06735 SM00855 Phosphoglycerate mutase family K08M3_RS06755 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06800 SM00245 tail specific protease K08M3_RS06810 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS06810 SM00895 K08M3_RS06810 K08M3_RS06840 SM01130 K08M3_RS06840 K08M3_RS06845 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06865 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K08M3_RS06875 SM00382 ATPases associated with a variety of cellular activities K08M3_RS06880 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07015 SM01230 K08M3_RS07015 K08M3_RS07030 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS07065 SM00052 Putative diguanylate phosphodiesterase K08M3_RS07075 SM00347 helix_turn_helix multiple antibiotic resistance protein K08M3_RS07105 SM00387 Histidine kinase-like ATPases K08M3_RS07105 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS07105 SM00448 cheY-homologous receiver domain K08M3_RS07110 SM00052 Putative diguanylate phosphodiesterase K08M3_RS07110 SM00267 diguanylate cyclase K08M3_RS07120 SM00028 Tetratricopeptide repeats K08M3_RS07150 SM00857 Resolvase, N terminal domain K08M3_RS07155 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS07180 SM00857 Resolvase, N terminal domain K08M3_RS07330 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07335 SM00100 Cyclic nucleotide-monophosphate binding domain K08M3_RS07335 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS07340 SM00479 K08M3_RS07340 K08M3_RS07375 SM00028 Tetratricopeptide repeats K08M3_RS07415 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07440 SM00420 helix_turn_helix, Deoxyribose operon repressor K08M3_RS07440 SM01134 K08M3_RS07440 K08M3_RS07455 SM00267 diguanylate cyclase K08M3_RS07480 SM00100 Cyclic nucleotide-monophosphate binding domain K08M3_RS07480 SM00387 Histidine kinase-like ATPases K08M3_RS07485 SM00448 cheY-homologous receiver domain K08M3_RS07490 SM00052 Putative diguanylate phosphodiesterase K08M3_RS07490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K08M3_RS07490 SM00091 PAS domain K08M3_RS07490 SM00267 diguanylate cyclase K08M3_RS07495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS07525 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. K08M3_RS07530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS07555 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07580 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07585 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07640 SM00267 diguanylate cyclase K08M3_RS07640 SM01079 K08M3_RS07640 K08M3_RS07645 SM00479 K08M3_RS07645 K08M3_RS07680 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07680 SM00487 DEAD-like helicases superfamily K08M3_RS07680 SM00490 helicase superfamily c-terminal domain K08M3_RS07680 SM00847 Helicase associated domain (HA2) Add an annotation K08M3_RS07755 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07755 SM00448 cheY-homologous receiver domain K08M3_RS07820 SM00448 cheY-homologous receiver domain K08M3_RS07825 SM00267 diguanylate cyclase K08M3_RS07840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS07870 SM01144 K08M3_RS07870 K08M3_RS07885 SM00852 Probable molybdopterin binding domain K08M3_RS07895 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07910 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07910 SM00448 cheY-homologous receiver domain K08M3_RS07915 SM00387 Histidine kinase-like ATPases K08M3_RS07915 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS07920 SM00382 ATPases associated with a variety of cellular activities K08M3_RS07955 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS08015 SM00382 ATPases associated with a variety of cellular activities K08M3_RS08045 SM00100 Cyclic nucleotide-monophosphate binding domain K08M3_RS08045 SM00419 helix_turn_helix, cAMP Regulatory protein K08M3_RS08095 SM00897 FIST N domain K08M3_RS08095 SM01204 K08M3_RS08095 K08M3_RS08100 SM00387 Histidine kinase-like ATPases K08M3_RS08100 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS08100 SM00448 cheY-homologous receiver domain K08M3_RS08145 SM00382 ATPases associated with a variety of cellular activities K08M3_RS08155 SM00981 K08M3_RS08155 K08M3_RS08190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K08M3_RS08190 SM00245 tail specific protease K08M3_RS08195 SM00945 ProQ/FINO family K08M3_RS08205 SM00382 ATPases associated with a variety of cellular activities K08M3_RS08260 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS08275 SM00382 ATPases associated with a variety of cellular activities K08M3_RS08305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS08310 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K08M3_RS08315 SM00327 von Willebrand factor (vWF) type A domain K08M3_RS08330 SM00112 Cadherin repeats. K08M3_RS08330 SM00237 Domains in Na-Ca exchangers and integrin-beta4 K08M3_RS08330 SM00327 von Willebrand factor (vWF) type A domain K08M3_RS08330 SM00736 Dystroglycan-type cadherin-like domains. K08M3_RS08350 SM00028 Tetratricopeptide repeats K08M3_RS08350 SM00267 diguanylate cyclase K08M3_RS08355 SM00346 helix_turn_helix isocitrate lyase regulation K08M3_RS08395 SM00829 Enoylreductase K08M3_RS08400 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS08410 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS08410 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K08M3_RS08420 SM00829 Enoylreductase K08M3_RS08430 SM00382 ATPases associated with a variety of cellular activities K08M3_RS08440 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS08440 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K08M3_RS08490 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS08515 SM00020 Trypsin-like serine protease K08M3_RS08515 SM00495 Chitin-binding domain type 3 K08M3_RS08550 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS08550 SM00895 K08M3_RS08550 K08M3_RS08650 SM00382 ATPases associated with a variety of cellular activities K08M3_RS08690 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS08790 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS08815 SM00382 ATPases associated with a variety of cellular activities K08M3_RS08830 SM01350 K08M3_RS08830 K08M3_RS08845 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS08845 SM00871 Bacterial transcription activator, effector binding domain K08M3_RS08855 SM00448 cheY-homologous receiver domain K08M3_RS08860 SM00091 PAS domain K08M3_RS08860 SM00387 Histidine kinase-like ATPases K08M3_RS08990 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K08M3_RS09000 SM01266 K08M3_RS09000 K08M3_RS09190 SM00547 Zinc finger domain K08M3_RS09200 SM00507 HNH nucleases K08M3_RS09300 SM00267 diguanylate cyclase K08M3_RS09425 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS09440 SM00387 Histidine kinase-like ATPases K08M3_RS09440 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS09440 SM00448 cheY-homologous receiver domain K08M3_RS09450 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS09490 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS09520 SM00052 Putative diguanylate phosphodiesterase K08M3_RS09525 SM00421 helix_turn_helix, Lux Regulon K08M3_RS09525 SM00448 cheY-homologous receiver domain K08M3_RS09605 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS09605 SM00387 Histidine kinase-like ATPases K08M3_RS09605 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS09605 SM00448 cheY-homologous receiver domain K08M3_RS09610 SM00421 helix_turn_helix, Lux Regulon K08M3_RS09610 SM00448 cheY-homologous receiver domain K08M3_RS09625 SM00528 Domain in histone-like proteins of HNS family K08M3_RS09630 SM00344 helix_turn_helix ASNC type K08M3_RS09850 SM00091 PAS domain K08M3_RS09850 SM00382 ATPases associated with a variety of cellular activities K08M3_RS09880 SM00387 Histidine kinase-like ATPases K08M3_RS09880 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS09880 SM00448 cheY-homologous receiver domain K08M3_RS09905 SM00052 Putative diguanylate phosphodiesterase K08M3_RS09920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS09920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS09935 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS09960 SM00100 Cyclic nucleotide-monophosphate binding domain K08M3_RS09960 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS09965 SM00479 K08M3_RS09965 K08M3_RS09970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS09970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS09980 SM00347 helix_turn_helix multiple antibiotic resistance protein K08M3_RS09985 SM00421 helix_turn_helix, Lux Regulon K08M3_RS09985 SM00448 cheY-homologous receiver domain K08M3_RS09990 SM00387 Histidine kinase-like ATPases K08M3_RS09990 SM01049 K08M3_RS09990 K08M3_RS10020 SM00849 Metallo-beta-lactamase superfamily K08M3_RS10110 SM00434 DNA Topoisomerase IV K08M3_RS10135 SM00852 Probable molybdopterin binding domain K08M3_RS10195 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K08M3_RS10195 SM00465 GIY-YIG type nucleases (URI domain) K08M3_RS10200 SM00421 helix_turn_helix, Lux Regulon K08M3_RS10200 SM00448 cheY-homologous receiver domain K08M3_RS10205 SM00486 DNA polymerase type-B family K08M3_RS10215 SM00841 Elongation factor P, C-terminal K08M3_RS10215 SM01185 K08M3_RS10215 K08M3_RS10225 SM00363 S4 RNA-binding domain K08M3_RS10240 SM00481 DNA polymerase alpha chain like domain K08M3_RS10280 SM00100 Cyclic nucleotide-monophosphate binding domain K08M3_RS10280 SM00419 helix_turn_helix, cAMP Regulatory protein K08M3_RS10305 SM00387 Histidine kinase-like ATPases K08M3_RS10305 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS10305 SM00448 cheY-homologous receiver domain K08M3_RS10355 SM00052 Putative diguanylate phosphodiesterase K08M3_RS10355 SM00091 PAS domain K08M3_RS10360 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS10390 SM00448 cheY-homologous receiver domain K08M3_RS10390 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS10395 SM00387 Histidine kinase-like ATPases K08M3_RS10395 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS10445 SM00382 ATPases associated with a variety of cellular activities K08M3_RS10505 SM00421 helix_turn_helix, Lux Regulon K08M3_RS10505 SM00448 cheY-homologous receiver domain K08M3_RS10510 SM00387 Histidine kinase-like ATPases K08M3_RS10510 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS10525 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS10570 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family K08M3_RS10575 SM00028 Tetratricopeptide repeats K08M3_RS10585 SM00411 bacterial (prokaryotic) histone like domain K08M3_RS10590 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS10605 SM00822 K08M3_RS10605 K08M3_RS10620 SM00481 DNA polymerase alpha chain like domain K08M3_RS10625 SM00260 Two component signalling adaptor domain K08M3_RS10625 SM00448 cheY-homologous receiver domain K08M3_RS10700 SM00825 Beta-ketoacyl synthase K08M3_RS10710 SM00822 K08M3_RS10710 K08M3_RS10715 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. K08M3_RS10745 SM00363 S4 RNA-binding domain K08M3_RS10755 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS10770 SM00226 Low molecular weight phosphatase family K08M3_RS10815 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS10840 SM00267 diguanylate cyclase K08M3_RS10845 SM00642 Alpha-amylase domain K08M3_RS10850 SM00382 ATPases associated with a variety of cellular activities K08M3_RS10890 SM00382 ATPases associated with a variety of cellular activities K08M3_RS10895 SM00382 ATPases associated with a variety of cellular activities K08M3_RS10930 SM00852 Probable molybdopterin binding domain K08M3_RS10935 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS10950 SM00382 ATPases associated with a variety of cellular activities K08M3_RS10950 SM00448 cheY-homologous receiver domain K08M3_RS10955 SM00487 DEAD-like helicases superfamily K08M3_RS10955 SM00490 helicase superfamily c-terminal domain K08M3_RS10990 SM00900 K08M3_RS10990 K08M3_RS11000 SM00478 endonuclease III K08M3_RS11000 SM00525 K08M3_RS11000 K08M3_RS11020 SM00479 K08M3_RS11020 K08M3_RS11085 SM00859 Semialdehyde dehydrogenase, NAD binding domain K08M3_RS11140 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K08M3_RS11140 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K08M3_RS11140 SM00493 K08M3_RS11140 K08M3_RS11165 SM00870 K08M3_RS11165 K08M3_RS11185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS11195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS11195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS11215 SM00098 Alkaline phosphatase homologues K08M3_RS11260 SM00493 K08M3_RS11260 K08M3_RS11270 SM00382 ATPases associated with a variety of cellular activities K08M3_RS11290 SM00448 cheY-homologous receiver domain K08M3_RS11340 SM00859 Semialdehyde dehydrogenase, NAD binding domain K08M3_RS11355 SM00825 Beta-ketoacyl synthase K08M3_RS11405 SM00463 Small MutS-related domain K08M3_RS11410 SM00855 Phosphoglycerate mutase family K08M3_RS11510 SM00382 ATPases associated with a variety of cellular activities K08M3_RS11520 SM00260 Two component signalling adaptor domain K08M3_RS11525 SM00260 Two component signalling adaptor domain K08M3_RS11535 SM00448 cheY-homologous receiver domain K08M3_RS11540 SM00073 Histidine Phosphotransfer domain K08M3_RS11540 SM00260 Two component signalling adaptor domain K08M3_RS11540 SM00387 Histidine kinase-like ATPases K08M3_RS11540 SM01231 K08M3_RS11540 K08M3_RS11550 SM00448 cheY-homologous receiver domain K08M3_RS11565 SM00382 ATPases associated with a variety of cellular activities K08M3_RS11565 SM00962 SRP54-type protein, GTPase domain K08M3_RS11630 SM00382 ATPases associated with a variety of cellular activities K08M3_RS11655 SM00382 ATPases associated with a variety of cellular activities K08M3_RS11655 SM00448 cheY-homologous receiver domain K08M3_RS11660 SM00387 Histidine kinase-like ATPases K08M3_RS11660 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS11665 SM00382 ATPases associated with a variety of cellular activities K08M3_RS11760 SM01130 K08M3_RS11760 K08M3_RS11800 SM00857 Resolvase, N terminal domain K08M3_RS11815 SM00382 ATPases associated with a variety of cellular activities K08M3_RS11890 SM00387 Histidine kinase-like ATPases K08M3_RS11890 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS11890 SM00448 cheY-homologous receiver domain K08M3_RS11900 SM00357 Cold shock protein domain K08M3_RS11920 SM00357 Cold shock protein domain K08M3_RS11930 SM00244 prohibitin homologues K08M3_RS11935 SM00244 prohibitin homologues K08M3_RS11950 SM00357 Cold shock protein domain K08M3_RS11985 SM00028 Tetratricopeptide repeats K08M3_RS12070 SM00479 K08M3_RS12070 K08M3_RS12085 SM00849 Metallo-beta-lactamase superfamily K08M3_RS12090 SM00257 Lysin motif K08M3_RS12105 SM00938 Nitrogen regulatory protein P-II K08M3_RS12115 SM00977 TilS substrate C-terminal domain K08M3_RS12125 SM00481 DNA polymerase alpha chain like domain K08M3_RS12155 SM00935 Outer membrane protein (OmpH-like) K08M3_RS12165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K08M3_RS12210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS12270 SM00849 Metallo-beta-lactamase superfamily K08M3_RS12335 SM00495 Chitin-binding domain type 3 K08M3_RS12335 SM00636 K08M3_RS12335 K08M3_RS12350 SM00487 DEAD-like helicases superfamily K08M3_RS12350 SM00490 helicase superfamily c-terminal domain K08M3_RS12450 SM00487 DEAD-like helicases superfamily K08M3_RS12460 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS12545 SM00267 diguanylate cyclase K08M3_RS12545 SM00448 cheY-homologous receiver domain K08M3_RS12575 SM00900 K08M3_RS12575 K08M3_RS12630 SM00464 Found in ATP-dependent protease La (LON) K08M3_RS12660 SM00267 diguanylate cyclase K08M3_RS12675 SM00925 MltA specific insert domain K08M3_RS12820 SM00420 helix_turn_helix, Deoxyribose operon repressor K08M3_RS12820 SM01134 K08M3_RS12820 K08M3_RS12850 SM00354 helix_turn _helix lactose operon repressor K08M3_RS12865 SM00421 helix_turn_helix, Lux Regulon K08M3_RS12910 SM00838 Elongation factor G C-terminus K08M3_RS12910 SM00889 Elongation factor G, domain IV K08M3_RS12915 SM00382 ATPases associated with a variety of cellular activities K08M3_RS12945 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain K08M3_RS12950 SM01133 K08M3_RS12950 K08M3_RS13005 SM00052 Putative diguanylate phosphodiesterase K08M3_RS13005 SM00091 PAS domain K08M3_RS13005 SM00267 diguanylate cyclase K08M3_RS13025 SM00347 helix_turn_helix multiple antibiotic resistance protein K08M3_RS13030 SM00028 Tetratricopeptide repeats K08M3_RS13035 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS13035 SM00322 K homology RNA-binding domain K08M3_RS13040 SM01387 K08M3_RS13040 K08M3_RS13060 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS13100 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13110 SM01103 K08M3_RS13110 K08M3_RS13135 SM00363 S4 RNA-binding domain K08M3_RS13175 SM00091 PAS domain K08M3_RS13175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS13175 SM00387 Histidine kinase-like ATPases K08M3_RS13175 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS13175 SM00448 cheY-homologous receiver domain K08M3_RS13195 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13200 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13220 SM01068 Putative carbohydrate binding domain K08M3_RS13230 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13250 SM00938 Nitrogen regulatory protein P-II K08M3_RS13275 SM00487 DEAD-like helicases superfamily K08M3_RS13275 SM00490 helicase superfamily c-terminal domain K08M3_RS13275 SM00847 Helicase associated domain (HA2) Add an annotation K08M3_RS13330 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13340 SM00947 Carbonic anhydrase K08M3_RS13370 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS13370 SM00895 K08M3_RS13370 K08M3_RS13375 SM00644 K08M3_RS13375 K08M3_RS13440 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13440 SM00962 SRP54-type protein, GTPase domain K08M3_RS13440 SM00963 SRP54-type protein, helical bundle domain K08M3_RS13450 SM01091 Transporter associated domain K08M3_RS13480 SM00829 Enoylreductase K08M3_RS13560 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K08M3_RS13570 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13580 SM00533 DNA-binding domain of DNA mismatch repair MUTS family K08M3_RS13580 SM00534 ATPase domain of DNA mismatch repair MUTS family K08M3_RS13590 SM00257 Lysin motif K08M3_RS13625 SM01192 K08M3_RS13625 K08M3_RS13625 SM01193 K08M3_RS13625 K08M3_RS13640 SM00954 Region found in RelA / SpoT proteins K08M3_RS13655 SM00073 Histidine Phosphotransfer domain K08M3_RS13655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS13655 SM00387 Histidine kinase-like ATPases K08M3_RS13655 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS13655 SM00448 cheY-homologous receiver domain K08M3_RS13680 SM00358 Double-stranded RNA binding motif K08M3_RS13680 SM00535 Ribonuclease III family K08M3_RS13690 SM00838 Elongation factor G C-terminus K08M3_RS13820 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS13835 SM00861 Transketolase, pyrimidine binding domain K08M3_RS13855 SM00731 SprT homologues. K08M3_RS13880 SM00732 Likely ribonuclease with RNase H fold. K08M3_RS13890 SM00382 ATPases associated with a variety of cellular activities K08M3_RS13910 SM01152 K08M3_RS13910 K08M3_RS13925 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS13945 SM00478 endonuclease III K08M3_RS13945 SM00525 K08M3_RS13945 K08M3_RS13995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS13995 SM01049 K08M3_RS13995 K08M3_RS14075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS14080 SM00354 helix_turn _helix lactose operon repressor K08M3_RS14110 SM00495 Chitin-binding domain type 3 K08M3_RS14165 SM00347 helix_turn_helix multiple antibiotic resistance protein K08M3_RS14210 SM00563 Phosphate acyltransferases K08M3_RS14245 SM00382 ATPases associated with a variety of cellular activities K08M3_RS14255 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS14270 SM00382 ATPases associated with a variety of cellular activities K08M3_RS14300 SM00924 MgtE intracellular N domain K08M3_RS14330 SM00487 DEAD-like helicases superfamily K08M3_RS14330 SM00490 helicase superfamily c-terminal domain K08M3_RS14335 SM00670 Large family of predicted nucleotide-binding domains K08M3_RS14355 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS14425 SM00382 ATPases associated with a variety of cellular activities K08M3_RS14430 SM00028 Tetratricopeptide repeats K08M3_RS14440 SM00965 Secretin and TonB N terminus short domain K08M3_RS14460 SM00052 Putative diguanylate phosphodiesterase K08M3_RS14460 SM00267 diguanylate cyclase K08M3_RS14470 SM00421 helix_turn_helix, Lux Regulon K08M3_RS14510 SM01018 B12 binding domain K08M3_RS14635 SM01005 Alanine racemase, C-terminal domain K08M3_RS14695 SM00965 Secretin and TonB N terminus short domain K08M3_RS14715 SM00842 Cell division protein FtsA K08M3_RS14765 SM00859 Semialdehyde dehydrogenase, NAD binding domain K08M3_RS14805 SM00919 Malic enzyme, NAD binding domain K08M3_RS14805 SM01274 K08M3_RS14805 K08M3_RS14825 SM00838 Elongation factor G C-terminus K08M3_RS14825 SM00889 Elongation factor G, domain IV K08M3_RS14865 SM00320 WD40 repeats K08M3_RS14905 SM00382 ATPases associated with a variety of cellular activities K08M3_RS14930 SM00100 Cyclic nucleotide-monophosphate binding domain K08M3_RS14930 SM00419 helix_turn_helix, cAMP Regulatory protein K08M3_RS14935 SM01150 K08M3_RS14935 K08M3_RS14980 SM00967 RNA 2'-O ribose methyltransferase substrate binding K08M3_RS14985 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS14985 SM00357 Cold shock protein domain K08M3_RS14985 SM00955 K08M3_RS14985 K08M3_RS15000 SM00671 Sel1-like repeats. K08M3_RS15005 SM00788 Adenylosuccinate synthetase K08M3_RS15015 SM00244 prohibitin homologues K08M3_RS15020 SM00244 prohibitin homologues K08M3_RS15040 SM00853 MutL C terminal dimerisation domain K08M3_RS15040 SM01340 K08M3_RS15040 K08M3_RS15045 SM00257 Lysin motif K08M3_RS15045 SM00646 K08M3_RS15045 K08M3_RS15125 SM00479 K08M3_RS15125 K08M3_RS15155 SM00450 Rhodanese Homology Domain K08M3_RS15170 SM00971 Serine acetyltransferase, N-terminal K08M3_RS15225 SM00841 Elongation factor P, C-terminal K08M3_RS15225 SM01185 K08M3_RS15225 K08M3_RS15250 SM00883 Chaperonin 10 Kd subunit K08M3_RS15280 SM00448 cheY-homologous receiver domain K08M3_RS15280 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS15285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS15285 SM00387 Histidine kinase-like ATPases K08M3_RS15285 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS15320 SM00421 helix_turn_helix, Lux Regulon K08M3_RS15320 SM00448 cheY-homologous receiver domain K08M3_RS15325 SM01091 Transporter associated domain K08M3_RS15355 SM00387 Histidine kinase-like ATPases K08M3_RS15355 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS15355 SM00448 cheY-homologous receiver domain K08M3_RS15370 SM00479 K08M3_RS15370 K08M3_RS15390 SM00878 Biotin carboxylase C-terminal domain K08M3_RS15415 SM00382 ATPases associated with a variety of cellular activities K08M3_RS15480 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS15485 SM00422 helix_turn_helix, mercury resistance K08M3_RS15495 SM00798 AICARFT/IMPCHase bienzyme K08M3_RS15495 SM00851 MGS-like domain K08M3_RS15500 SM01209 K08M3_RS15500 K08M3_RS15500 SM01210 K08M3_RS15500 K08M3_RS15510 SM00411 bacterial (prokaryotic) histone like domain K08M3_RS15515 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS15530 SM00986 Uracil DNA glycosylase superfamily K08M3_RS15530 SM00987 UreE urease accessory protein, C-terminal domain K08M3_RS15550 SM00663 RNA polymerase I subunit A N-terminus K08M3_RS15575 SM00649 Ribosomal protein L11/L12 K08M3_RS15580 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K08M3_RS15580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K08M3_RS15645 SM00155 Phospholipase D. Active site motifs. K08M3_RS15705 SM00360 RNA recognition motif K08M3_RS15770 SM00563 Phosphate acyltransferases K08M3_RS15795 SM00450 Rhodanese Homology Domain K08M3_RS15815 SM00382 ATPases associated with a variety of cellular activities K08M3_RS15820 SM00382 ATPases associated with a variety of cellular activities K08M3_RS15820 SM00962 SRP54-type protein, GTPase domain K08M3_RS15820 SM00963 SRP54-type protein, helical bundle domain K08M3_RS15885 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS15890 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K08M3_RS15895 SM00052 Putative diguanylate phosphodiesterase K08M3_RS15925 SM01144 K08M3_RS15925 K08M3_RS15930 SM00052 Putative diguanylate phosphodiesterase K08M3_RS15930 SM00897 FIST N domain K08M3_RS15930 SM01204 K08M3_RS15930 K08M3_RS15965 SM01219 K08M3_RS15965 K08M3_RS15990 SM00028 Tetratricopeptide repeats K08M3_RS16045 SM00357 Cold shock protein domain K08M3_RS16045 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16045 SM00959 Rho termination factor, N-terminal domain K08M3_RS16055 SM00487 DEAD-like helicases superfamily K08M3_RS16055 SM00490 helicase superfamily c-terminal domain K08M3_RS16080 SM00341 Helicase and RNase D C-terminal K08M3_RS16080 SM00487 DEAD-like helicases superfamily K08M3_RS16080 SM00490 helicase superfamily c-terminal domain K08M3_RS16080 SM00956 K08M3_RS16080 K08M3_RS16090 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS16150 SM00876 Biotin and Thiamin Synthesis associated domain K08M3_RS16260 SM01001 AIR carboxylase K08M3_RS16285 SM00257 Lysin motif K08M3_RS16355 SM00563 Phosphate acyltransferases K08M3_RS16365 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16405 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS16425 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16465 SM00470 ParB-like nuclease domain K08M3_RS16480 SM01228 K08M3_RS16480 K08M3_RS16500 SM01234 K08M3_RS16500 K08M3_RS16515 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16525 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS16525 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K08M3_RS16535 SM00470 ParB-like nuclease domain K08M3_RS16605 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16610 SM00052 Putative diguanylate phosphodiesterase K08M3_RS16610 SM00267 diguanylate cyclase K08M3_RS16625 SM00448 cheY-homologous receiver domain K08M3_RS16630 SM00387 Histidine kinase-like ATPases K08M3_RS16640 SM00421 helix_turn_helix, Lux Regulon K08M3_RS16645 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS16670 SM00360 RNA recognition motif K08M3_RS16690 SM00344 helix_turn_helix ASNC type K08M3_RS16700 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16710 SM00487 DEAD-like helicases superfamily K08M3_RS16710 SM00490 helicase superfamily c-terminal domain K08M3_RS16720 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS16725 SM00829 Enoylreductase K08M3_RS16815 SM00347 helix_turn_helix multiple antibiotic resistance protein K08M3_RS16830 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS16830 SM00871 Bacterial transcription activator, effector binding domain K08M3_RS16835 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS16860 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16890 SM00448 cheY-homologous receiver domain K08M3_RS16890 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS16895 SM00387 Histidine kinase-like ATPases K08M3_RS16955 SM00382 ATPases associated with a variety of cellular activities K08M3_RS16960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS16960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS16995 SM00857 Resolvase, N terminal domain K08M3_RS17000 SM00354 helix_turn _helix lactose operon repressor K08M3_RS17040 SM00354 helix_turn _helix lactose operon repressor K08M3_RS17095 SM00642 Alpha-amylase domain K08M3_RS17115 SM00642 Alpha-amylase domain K08M3_RS17125 SM00642 Alpha-amylase domain K08M3_RS17130 SM00671 Sel1-like repeats. K08M3_RS17150 SM00966 SpoVT / AbrB like domain K08M3_RS17190 SM00421 helix_turn_helix, Lux Regulon K08M3_RS17210 SM00642 Alpha-amylase domain K08M3_RS17220 SM00642 Alpha-amylase domain K08M3_RS17285 SM00226 Low molecular weight phosphatase family K08M3_RS17320 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. K08M3_RS17335 SM00450 Rhodanese Homology Domain K08M3_RS17345 SM00936 Penicillin-binding protein 5, C-terminal domain K08M3_RS17350 SM00642 Alpha-amylase domain K08M3_RS17355 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS17465 SM00448 cheY-homologous receiver domain K08M3_RS17465 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS17470 SM00387 Histidine kinase-like ATPases K08M3_RS17470 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS17625 SM00382 ATPases associated with a variety of cellular activities K08M3_RS17650 SM00382 ATPases associated with a variety of cellular activities K08M3_RS17660 SM00020 Trypsin-like serine protease K08M3_RS17680 SM00481 DNA polymerase alpha chain like domain K08M3_RS17725 SM00448 cheY-homologous receiver domain K08M3_RS17725 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS17730 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS17745 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS17750 SM00052 Putative diguanylate phosphodiesterase K08M3_RS17750 SM00267 diguanylate cyclase K08M3_RS17760 SM00829 Enoylreductase K08M3_RS17765 SM00972 Spore Coat Protein U domain K08M3_RS17770 SM00972 Spore Coat Protein U domain K08M3_RS17785 SM00972 Spore Coat Protein U domain K08M3_RS17790 SM01057 Eukaryotic-type carbonic anhydrase K08M3_RS17825 SM00382 ATPases associated with a variety of cellular activities K08M3_RS17840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS17840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS17860 SM00587 ZnF_C4 abd HLH domain containing kinases domain K08M3_RS17895 SM00382 ATPases associated with a variety of cellular activities K08M3_RS17915 SM00267 diguanylate cyclase K08M3_RS17920 SM00028 Tetratricopeptide repeats K08M3_RS17940 SM00422 helix_turn_helix, mercury resistance K08M3_RS17950 SM00257 Lysin motif K08M3_RS17960 SM00487 DEAD-like helicases superfamily K08M3_RS17960 SM00490 helicase superfamily c-terminal domain K08M3_RS17990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS17990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS18010 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18015 SM00267 diguanylate cyclase K08M3_RS18025 SM00327 von Willebrand factor (vWF) type A domain K08M3_RS18030 SM00327 von Willebrand factor (vWF) type A domain K08M3_RS18050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS18050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS18060 SM00421 helix_turn_helix, Lux Regulon K08M3_RS18065 SM00421 helix_turn_helix, Lux Regulon K08M3_RS18075 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18100 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18110 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18115 SM00387 Histidine kinase-like ATPases K08M3_RS18115 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS18120 SM00448 cheY-homologous receiver domain K08M3_RS18120 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS18185 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08M3_RS18185 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18190 SM00849 Metallo-beta-lactamase superfamily K08M3_RS18210 SM01060 K08M3_RS18210 K08M3_RS18220 SM00829 Enoylreductase K08M3_RS18230 SM01022 K08M3_RS18230 K08M3_RS18290 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18325 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS18405 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18435 SM00729 Elongator protein 3, MiaB family, Radical SAM K08M3_RS18455 SM00260 Two component signalling adaptor domain K08M3_RS18455 SM00448 cheY-homologous receiver domain K08M3_RS18470 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18475 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18490 SM00420 helix_turn_helix, Deoxyribose operon repressor K08M3_RS18490 SM01134 K08M3_RS18490 K08M3_RS18505 SM01007 Class II Aldolase and Adducin N-terminal domain K08M3_RS18535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS18535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS18570 SM00422 helix_turn_helix, mercury resistance K08M3_RS18575 SM00642 Alpha-amylase domain K08M3_RS18580 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K08M3_RS18605 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08M3_RS18650 SM00267 diguanylate cyclase K08M3_RS18685 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS18700 SM00382 ATPases associated with a variety of cellular activities K08M3_RS18715 SM01119 K08M3_RS18715 K08M3_RS18770 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS18780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K08M3_RS18830 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS18850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS18850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS18880 SM00052 Putative diguanylate phosphodiesterase K08M3_RS18880 SM00267 diguanylate cyclase K08M3_RS18940 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS19030 SM01322 K08M3_RS19030 K08M3_RS19035 SM00357 Cold shock protein domain K08M3_RS19045 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS19045 SM00267 diguanylate cyclase K08M3_RS19060 SM00382 ATPases associated with a variety of cellular activities K08M3_RS19065 SM00382 ATPases associated with a variety of cellular activities K08M3_RS19075 SM00448 cheY-homologous receiver domain K08M3_RS19100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS19100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS19200 SM00487 DEAD-like helicases superfamily K08M3_RS19200 SM00490 helicase superfamily c-terminal domain K08M3_RS19225 SM00357 Cold shock protein domain K08M3_RS19245 SM00833 Cobalamin synthesis protein cobW C-terminal domain K08M3_RS19250 SM00487 DEAD-like helicases superfamily K08M3_RS19250 SM00490 helicase superfamily c-terminal domain K08M3_RS19270 SM00052 Putative diguanylate phosphodiesterase K08M3_RS19275 SM00382 ATPases associated with a variety of cellular activities K08M3_RS19280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS19305 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS19310 SM00316 Ribosomal protein S1-like RNA-binding domain K08M3_RS19310 SM00357 Cold shock protein domain K08M3_RS19310 SM00955 K08M3_RS19310 K08M3_RS19315 SM00487 DEAD-like helicases superfamily K08M3_RS19315 SM00490 helicase superfamily c-terminal domain K08M3_RS19410 SM00833 Cobalamin synthesis protein cobW C-terminal domain K08M3_RS19415 SM00833 Cobalamin synthesis protein cobW C-terminal domain K08M3_RS19440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K08M3_RS19440 SM00091 PAS domain K08M3_RS19440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS19470 SM00422 helix_turn_helix, mercury resistance K08M3_RS19505 SM00822 K08M3_RS19505 K08M3_RS19590 SM00382 ATPases associated with a variety of cellular activities K08M3_RS19595 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS19595 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K08M3_RS19640 SM00893 Electron transfer flavoprotein domain K08M3_RS19650 SM00861 Transketolase, pyrimidine binding domain K08M3_RS19700 SM00448 cheY-homologous receiver domain K08M3_RS19700 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS19705 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS19710 SM00871 Bacterial transcription activator, effector binding domain K08M3_RS19730 SM00028 Tetratricopeptide repeats K08M3_RS19730 SM00267 diguanylate cyclase K08M3_RS19750 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS19770 SM01012 K08M3_RS19770 K08M3_RS19790 SM00382 ATPases associated with a variety of cellular activities K08M3_RS19825 SM00331 Sigma factor PP2C-like phosphatases K08M3_RS19825 SM00448 cheY-homologous receiver domain K08M3_RS19845 SM00220 Serine/Threonine protein kinases, catalytic domain K08M3_RS19850 SM00240 Forkhead associated domain K08M3_RS19880 SM00331 Sigma factor PP2C-like phosphatases K08M3_RS19880 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain K08M3_RS19925 SM00382 ATPases associated with a variety of cellular activities K08M3_RS19925 SM01086 C-terminal, D2-small domain, of ClpB protein K08M3_RS19995 SM00382 ATPases associated with a variety of cellular activities K08M3_RS20035 SM01005 Alanine racemase, C-terminal domain K08M3_RS20040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS20040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS20045 SM01311 K08M3_RS20045 K08M3_RS20065 SM00493 K08M3_RS20065 K08M3_RS20065 SM00778 Zinc-binding domain of primase-helicase K08M3_RS20070 SM00482 DNA polymerase A domain K08M3_RS20290 SM00642 Alpha-amylase domain K08M3_RS20305 SM00880 K08M3_RS20305 K08M3_RS20325 SM00267 diguanylate cyclase K08M3_RS20335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K08M3_RS20335 SM00267 diguanylate cyclase K08M3_RS20455 SM00387 Histidine kinase-like ATPases K08M3_RS20460 SM00421 helix_turn_helix, Lux Regulon K08M3_RS20460 SM00448 cheY-homologous receiver domain K08M3_RS20510 SM00450 Rhodanese Homology Domain K08M3_RS20515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K08M3_RS20550 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS20590 SM00382 ATPases associated with a variety of cellular activities K08M3_RS20600 SM00267 diguanylate cyclase K08M3_RS20600 SM00448 cheY-homologous receiver domain K08M3_RS20605 SM00267 diguanylate cyclase K08M3_RS20620 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K08M3_RS20620 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K08M3_RS20630 SM00387 Histidine kinase-like ATPases K08M3_RS20630 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS20635 SM00448 cheY-homologous receiver domain K08M3_RS20635 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS20685 SM00369 Leucine-rich repeats, typical (most populated) subfamily K08M3_RS20840 SM00881 CoA binding domain K08M3_RS20860 SM00091 PAS domain K08M3_RS20860 SM00267 diguanylate cyclase K08M3_RS20860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS20870 SM00796 Allophanate hydrolase subunit 1 K08M3_RS20875 SM00797 Allophanate hydrolase subunit 2 K08M3_RS20890 SM00382 ATPases associated with a variety of cellular activities K08M3_RS20905 SM00052 Putative diguanylate phosphodiesterase K08M3_RS20905 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08M3_RS20905 SM00267 diguanylate cyclase K08M3_RS20915 SM00271 DnaJ molecular chaperone homology domain K08M3_RS20980 SM00782 PhnA Zinc-Ribbon K08M3_RS21015 SM00116 Domain in cystathionine beta-synthase and other proteins. K08M3_RS21020 SM00867 YceI-like domain K08M3_RS21040 SM00052 Putative diguanylate phosphodiesterase K08M3_RS21045 SM00487 DEAD-like helicases superfamily K08M3_RS21045 SM00490 helicase superfamily c-terminal domain K08M3_RS21060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS21100 SM00495 Chitin-binding domain type 3 K08M3_RS21100 SM00636 K08M3_RS21100 K08M3_RS21110 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS21125 SM00382 ATPases associated with a variety of cellular activities K08M3_RS21135 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS21135 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K08M3_RS21145 SM00052 Putative diguanylate phosphodiesterase K08M3_RS21160 SM00354 helix_turn _helix lactose operon repressor K08M3_RS21210 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS21235 SM00849 Metallo-beta-lactamase superfamily K08M3_RS21255 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS21280 SM00479 K08M3_RS21280 K08M3_RS21285 SM00382 ATPases associated with a variety of cellular activities K08M3_RS21315 SM00422 helix_turn_helix, mercury resistance K08M3_RS21355 SM00924 MgtE intracellular N domain K08M3_RS21395 SM00953 K08M3_RS21395 K08M3_RS21410 SM00704 CDGSH-type zinc finger. Function unknown. K08M3_RS21475 SM00260 Two component signalling adaptor domain K08M3_RS21475 SM00448 cheY-homologous receiver domain K08M3_RS21485 SM00421 helix_turn_helix, Lux Regulon K08M3_RS21485 SM00448 cheY-homologous receiver domain K08M3_RS21495 SM00267 diguanylate cyclase K08M3_RS21500 SM00421 helix_turn_helix, Lux Regulon K08M3_RS21500 SM00448 cheY-homologous receiver domain K08M3_RS21505 SM00052 Putative diguanylate phosphodiesterase K08M3_RS21505 SM00448 cheY-homologous receiver domain K08M3_RS21510 SM00062 Bacterial periplasmic substrate-binding proteins K08M3_RS21510 SM00387 Histidine kinase-like ATPases K08M3_RS21510 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS21510 SM00448 cheY-homologous receiver domain K08M3_RS21525 SM00387 Histidine kinase-like ATPases K08M3_RS21525 SM00448 cheY-homologous receiver domain K08M3_RS21560 SM00990 K08M3_RS21560 K08M3_RS21580 SM00046 Diacylglycerol kinase catalytic domain (presumed) K08M3_RS21600 SM00327 von Willebrand factor (vWF) type A domain K08M3_RS21605 SM00327 von Willebrand factor (vWF) type A domain K08M3_RS21645 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS21660 SM00073 Histidine Phosphotransfer domain K08M3_RS21660 SM00387 Histidine kinase-like ATPases K08M3_RS21660 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS21660 SM00448 cheY-homologous receiver domain K08M3_RS21670 SM00851 MGS-like domain K08M3_RS21720 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS21725 SM00422 helix_turn_helix, mercury resistance K08M3_RS21730 SM00382 ATPases associated with a variety of cellular activities K08M3_RS21770 SM00354 helix_turn _helix lactose operon repressor K08M3_RS21790 SM00382 ATPases associated with a variety of cellular activities K08M3_RS21800 SM00052 Putative diguanylate phosphodiesterase K08M3_RS21800 SM00267 diguanylate cyclase K08M3_RS21855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K08M3_RS21865 SM00387 Histidine kinase-like ATPases K08M3_RS21865 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS21865 SM00448 cheY-homologous receiver domain K08M3_RS21880 SM00244 prohibitin homologues K08M3_RS21895 SM00382 ATPases associated with a variety of cellular activities K08M3_RS21925 SM00028 Tetratricopeptide repeats K08M3_RS21925 SM00267 diguanylate cyclase K08M3_RS21930 SM00822 K08M3_RS21930 K08M3_RS21965 SM00422 helix_turn_helix, mercury resistance K08M3_RS21985 SM00878 Biotin carboxylase C-terminal domain K08M3_RS22005 SM01266 K08M3_RS22005 K08M3_RS22010 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS22075 SM00382 ATPases associated with a variety of cellular activities K08M3_RS22100 SM00382 ATPases associated with a variety of cellular activities K08M3_RS22115 SM00893 Electron transfer flavoprotein domain K08M3_RS22120 SM00893 Electron transfer flavoprotein domain K08M3_RS22140 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS22140 SM00866 K08M3_RS22140 K08M3_RS22185 SM00822 K08M3_RS22185 K08M3_RS22195 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS22245 SM00240 Forkhead associated domain K08M3_RS22265 SM00344 helix_turn_helix ASNC type K08M3_RS22300 SM00220 Serine/Threonine protein kinases, catalytic domain K08M3_RS22335 SM00382 ATPases associated with a variety of cellular activities K08M3_RS22335 SM01086 C-terminal, D2-small domain, of ClpB protein K08M3_RS22340 SM00382 ATPases associated with a variety of cellular activities K08M3_RS22380 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS22390 SM00736 Dystroglycan-type cadherin-like domains. K08M3_RS22410 SM00028 Tetratricopeptide repeats K08M3_RS22410 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS22435 SM01240 K08M3_RS22435 K08M3_RS22450 SM00448 cheY-homologous receiver domain K08M3_RS22485 SM00852 Probable molybdopterin binding domain K08M3_RS22505 SM00450 Rhodanese Homology Domain K08M3_RS22530 SM00861 Transketolase, pyrimidine binding domain K08M3_RS22535 SM00091 PAS domain K08M3_RS22535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS22570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS22605 SM00421 helix_turn_helix, Lux Regulon K08M3_RS22605 SM00448 cheY-homologous receiver domain K08M3_RS22610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS22610 SM00387 Histidine kinase-like ATPases K08M3_RS22625 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K08M3_RS22660 SM00822 K08M3_RS22660 K08M3_RS22710 SM00344 helix_turn_helix ASNC type K08M3_RS22735 SM00347 helix_turn_helix multiple antibiotic resistance protein K08M3_RS22740 SM00387 Histidine kinase-like ATPases K08M3_RS22740 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS22740 SM00448 cheY-homologous receiver domain K08M3_RS22755 SM00465 GIY-YIG type nucleases (URI domain) K08M3_RS22780 SM00387 Histidine kinase-like ATPases K08M3_RS22780 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS22780 SM00448 cheY-homologous receiver domain K08M3_RS22785 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M3_RS22810 SM00344 helix_turn_helix ASNC type K08M3_RS22820 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS22830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS22830 SM00387 Histidine kinase-like ATPases K08M3_RS22830 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS22835 SM00448 cheY-homologous receiver domain K08M3_RS22835 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS22850 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS22870 SM00924 MgtE intracellular N domain K08M3_RS22885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K08M3_RS22890 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS22895 SM00563 Phosphate acyltransferases K08M3_RS22940 SM00448 cheY-homologous receiver domain K08M3_RS22940 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS22945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS22945 SM00387 Histidine kinase-like ATPases K08M3_RS22945 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS22990 SM00357 Cold shock protein domain K08M3_RS23020 SM00936 Penicillin-binding protein 5, C-terminal domain K08M3_RS23040 SM00640 Glycosyl hydrolases family 32 K08M3_RS23055 SM00354 helix_turn _helix lactose operon repressor K08M3_RS23070 SM00822 K08M3_RS23070 K08M3_RS23110 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS23110 SM00871 Bacterial transcription activator, effector binding domain K08M3_RS23140 SM00487 DEAD-like helicases superfamily K08M3_RS23140 SM00490 helicase superfamily c-terminal domain K08M3_RS23170 SM00829 Enoylreductase K08M3_RS23185 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS23190 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS23205 SM00344 helix_turn_helix ASNC type K08M3_RS23240 SM00788 Adenylosuccinate synthetase K08M3_RS23245 SM00870 K08M3_RS23245 K08M3_RS23265 SM00421 helix_turn_helix, Lux Regulon K08M3_RS23300 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS23300 SM00866 K08M3_RS23300 K08M3_RS23325 SM00382 ATPases associated with a variety of cellular activities K08M3_RS23375 SM00155 Phospholipase D. Active site motifs. K08M3_RS23385 SM01022 K08M3_RS23385 K08M3_RS23390 SM00028 Tetratricopeptide repeats K08M3_RS23400 SM00422 helix_turn_helix, mercury resistance K08M3_RS23425 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K08M3_RS23435 SM00838 Elongation factor G C-terminus K08M3_RS23435 SM00889 Elongation factor G, domain IV K08M3_RS23470 SM00382 ATPases associated with a variety of cellular activities K08M3_RS23545 SM00420 helix_turn_helix, Deoxyribose operon repressor K08M3_RS23545 SM01134 K08M3_RS23545 K08M3_RS23575 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS23615 SM00883 Chaperonin 10 Kd subunit K08M3_RS23625 SM00450 Rhodanese Homology Domain K08M3_RS23640 SM01240 K08M3_RS23640 K08M3_RS23695 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS23735 SM00883 Chaperonin 10 Kd subunit K08M3_RS23745 SM00450 Rhodanese Homology Domain K08M3_RS23760 SM01240 K08M3_RS23760 K08M3_RS23835 SM00858 K08M3_RS23835 K08M3_RS23900 SM00631 K08M3_RS23900 K08M3_RS23930 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS23930 SM00866 K08M3_RS23930 K08M3_RS23940 SM00382 ATPases associated with a variety of cellular activities K08M3_RS23970 SM00354 helix_turn _helix lactose operon repressor K08M3_RS24020 SM00382 ATPases associated with a variety of cellular activities K08M3_RS24035 SM01057 Eukaryotic-type carbonic anhydrase K08M3_RS24095 SM01266 K08M3_RS24095 K08M3_RS24130 SM00267 diguanylate cyclase K08M3_RS24140 SM00530 Helix-turn-helix XRE-family like proteins K08M3_RS24145 SM00267 diguanylate cyclase K08M3_RS24145 SM01079 K08M3_RS24145 K08M3_RS24240 SM00267 diguanylate cyclase K08M3_RS24245 SM00382 ATPases associated with a variety of cellular activities K08M3_RS24245 SM00448 cheY-homologous receiver domain K08M3_RS24250 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K08M3_RS24250 SM00387 Histidine kinase-like ATPases K08M3_RS24310 SM00849 Metallo-beta-lactamase superfamily K08M3_RS24350 SM00382 ATPases associated with a variety of cellular activities K08M3_RS24420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS24420 SM00387 Histidine kinase-like ATPases K08M3_RS24420 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS24425 SM00448 cheY-homologous receiver domain K08M3_RS24425 SM00862 Transcriptional regulatory protein, C terminal K08M3_RS24520 SM00382 ATPases associated with a variety of cellular activities K08M3_RS24550 SM00014 Acid phosphatase homologues K08M3_RS24570 SM00822 K08M3_RS24570 K08M3_RS24605 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS24700 SM00495 Chitin-binding domain type 3 K08M3_RS24705 SM00344 helix_turn_helix ASNC type K08M3_RS24730 SM00829 Enoylreductase K08M3_RS24745 SM00267 diguanylate cyclase K08M3_RS24765 SM00849 Metallo-beta-lactamase superfamily K08M3_RS24785 SM00267 diguanylate cyclase K08M3_RS24805 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K08M3_RS24805 SM00495 Chitin-binding domain type 3 K08M3_RS24805 SM00636 K08M3_RS24805 K08M3_RS24850 SM00342 helix_turn_helix, arabinose operon control protein K08M3_RS24850 SM01009 AlkA N-terminal domain K08M3_RS24900 SM00345 helix_turn_helix gluconate operon transcriptional repressor K08M3_RS24905 SM00382 ATPases associated with a variety of cellular activities K08M3_RS24935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K08M3_RS24935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K08M3_RS24935 SM01049 K08M3_RS24935 K08M3_RS24950 SM00448 cheY-homologous receiver domain K08M3_RS24950 SM00850 LytTr DNA-binding domain K08M3_RS24955 SM00387 Histidine kinase-like ATPases K08M3_RS24975 SM00382 ATPases associated with a variety of cellular activities K08M3_RS25000 SM00387 Histidine kinase-like ATPases K08M3_RS25000 SM00388 His Kinase A (phosphoacceptor) domain K08M3_RS25000 SM00448 cheY-homologous receiver domain K08M3_RS25020 SM00382 ATPases associated with a variety of cellular activities K08M3_RS25025 SM00382 ATPases associated with a variety of cellular activities K08M3_RS25470 SM00400 zinc finger K08M3_RS25585 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K08M3_RS25585 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K08M3_RS25585 SM00493 K08M3_RS25585 K08M3_RS25690 SM00382 ATPases associated with a variety of cellular activities K08M3_RS25825 SM00528 Domain in histone-like proteins of HNS family K08M3_RS25840 SM00477 DNA/RNA non-specific endonuclease K08M3_RS25840 SM00892 DNA/RNA non-specific endonuclease K08M3_RS25865 SM00052 Putative diguanylate phosphodiesterase K08M3_RS25865 SM00267 diguanylate cyclase K08M3_RS26040 SM00974 K08M3_RS26040 K08M3_RS26095 SM00244 prohibitin homologues K08M3_RS26100 SM00244 prohibitin homologues K08M3_RS26145 SM00052 Putative diguanylate phosphodiesterase K08M3_RS26145 SM00267 diguanylate cyclase K08M3_RS26290 SM00052 Putative diguanylate phosphodiesterase K08M3_RS26300 SM00267 diguanylate cyclase K08M3_RS26410 SM00493 K08M3_RS26410 K08M3_RS26450 SM00479 K08M3_RS26450