locus-tag class description K08M4_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix K08M4_RS00005 PF00308 Bacterial dnaA protein K08M4_RS00005 PF11638 DnaA N-terminal domain K08M4_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain K08M4_RS00010 PF02767 DNA polymerase III beta subunit, central domain K08M4_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain K08M4_RS00015 PF02463 RecF/RecN/SMC N terminal domain K08M4_RS00020 PF00204 DNA gyrase B K08M4_RS00020 PF18053 DNA gyrase B subunit insert domain K08M4_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS00020 PF01751 Toprim domain K08M4_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus K08M4_RS00025 PF00011 Hsp20/alpha crystallin family K08M4_RS00030 PF00155 Aminotransferase class I and II K08M4_RS00035 PF05746 DALR anticodon binding domain K08M4_RS00035 PF02092 Glycyl-tRNA synthetase beta subunit K08M4_RS00040 PF02091 Glycyl-tRNA synthetase alpha subunit K08M4_RS00045 PF01169 Uncharacterized protein family UPF0016 K08M4_RS00055 PF01206 Sulfurtransferase TusA K08M4_RS00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS00065 PF03466 LysR substrate binding domain K08M4_RS00070 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_RS00070 PF00107 Zinc-binding dehydrogenase K08M4_RS00075 PF02803 Thiolase, C-terminal domain K08M4_RS00075 PF00108 Thiolase, N-terminal domain K08M4_RS00080 PF00378 Enoyl-CoA hydratase/isomerase K08M4_RS00080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K08M4_RS00080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K08M4_RS00085 PF01205 Uncharacterized protein family UPF0029 K08M4_RS00085 PF09186 Domain of unknown function (DUF1949) K08M4_RS00090 PF02386 Cation transport protein K08M4_RS00095 PF12724 Flavodoxin domain K08M4_RS00140 PF13358 DDE superfamily endonuclease K08M4_RS00150 PF07732 Multicopper oxidase K08M4_RS00150 PF07731 Multicopper oxidase K08M4_RS00150 PF00394 Multicopper oxidase K08M4_RS00155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) K08M4_RS00160 PF13667 ThiC-associated domain K08M4_RS00160 PF01964 Radical SAM ThiC family K08M4_RS00165 PF02581 Thiamine monophosphate synthase K08M4_RS00170 PF00899 ThiF family K08M4_RS00175 PF02597 ThiS family K08M4_RS00180 PF05690 Thiazole biosynthesis protein ThiG K08M4_RS00185 PF04055 Radical SAM superfamily K08M4_RS00185 PF06968 Biotin and Thiamin Synthesis associated domain K08M4_RS00190 PF00557 Metallopeptidase family M24 K08M4_RS00190 PF00557 Metallopeptidase family M24 K08M4_RS00190 PF01321 Creatinase/Prolidase N-terminal domain K08M4_RS00190 PF01321 Creatinase/Prolidase N-terminal domain K08M4_RS00195 PF03466 LysR substrate binding domain K08M4_RS00195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS00200 PF07690 Major Facilitator Superfamily K08M4_RS00220 PF05114 Protein of unknown function (DUF692) K08M4_RS00230 PF13361 UvrD-like helicase C-terminal domain K08M4_RS00230 PF00580 UvrD/REP helicase N-terminal domain K08M4_RS00235 PF08534 Redoxin K08M4_RS00245 PF01810 LysE type translocator K08M4_RS00250 PF12833 Helix-turn-helix domain K08M4_RS00250 PF02311 AraC-like ligand binding domain K08M4_RS00255 PF00892 EamA-like transporter family K08M4_RS00260 PF09382 RQC domain K08M4_RS00260 PF00270 DEAD/DEAH box helicase K08M4_RS00260 PF00271 Helicase conserved C-terminal domain K08M4_RS00260 PF00570 HRDC domain K08M4_RS00260 PF16124 RecQ zinc-binding K08M4_RS00270 PF02592 Putative vitamin uptake transporter K08M4_RS00275 PF02541 Ppx/GppA phosphatase family K08M4_RS00280 PF00270 DEAD/DEAH box helicase K08M4_RS00280 PF00271 Helicase conserved C-terminal domain K08M4_RS00285 PF00085 Thioredoxin K08M4_RS00290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_RS00290 PF07497 Rho termination factor, RNA-binding domain K08M4_RS00290 PF07498 Rho termination factor, N-terminal domain K08M4_RS00300 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K08M4_RS00305 PF00175 Oxidoreductase NAD-binding domain K08M4_RS00305 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_RS00310 PF00175 Oxidoreductase NAD-binding domain K08M4_RS00365 PF13358 DDE superfamily endonuclease K08M4_RS00375 PF13358 DDE superfamily endonuclease K08M4_RS00385 PF07219 HemY protein N-terminus K08M4_RS00390 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase K08M4_RS00395 PF02602 Uroporphyrinogen-III synthase HemD K08M4_RS00400 PF03900 Porphobilinogen deaminase, C-terminal domain K08M4_RS00400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain K08M4_RS00405 PF12633 Adenylate cyclase NT domain K08M4_RS00405 PF01295 Adenylate cyclase, class-I K08M4_RS00410 PF01491 Frataxin-like domain K08M4_RS00420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K08M4_RS00420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K08M4_RS00425 PF01678 Diaminopimelate epimerase K08M4_RS00435 PF00589 Phage integrase family K08M4_RS00435 PF02899 Phage integrase, N-terminal SAM-like domain K08M4_RS00440 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS00445 PF10442 FIST C domain K08M4_RS00445 PF08495 FIST N domain K08M4_RS00445 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS00445 PF00563 EAL domain K08M4_RS00450 PF10442 FIST C domain K08M4_RS00450 PF08495 FIST N domain K08M4_RS00450 PF00563 EAL domain K08M4_RS00450 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS00455 PF03942 DTW domain K08M4_RS00475 PF12146 Serine aminopeptidase, S33 K08M4_RS00480 PF01810 LysE type translocator K08M4_RS00485 PF00563 EAL domain K08M4_RS00485 PF08668 HDOD domain K08M4_RS00490 PF01022 Bacterial regulatory protein, arsR family K08M4_RS00495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_RS00495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_RS00540 PF01914 MarC family integral membrane protein K08M4_RS00555 PF00448 SRP54-type protein, GTPase domain K08M4_RS00555 PF02881 SRP54-type protein, helical bundle domain K08M4_RS00560 PF00005 ABC transporter K08M4_RS00565 PF18075 FtsX extracellular domain K08M4_RS00570 PF04545 Sigma-70, region 4 K08M4_RS00570 PF04542 Sigma-70 region 2 K08M4_RS00570 PF00140 Sigma-70 factor, region 1.2 K08M4_RS00575 PF00581 Rhodanese-like domain K08M4_RS00580 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease K08M4_RS00580 PF01694 Rhomboid family K08M4_RS00585 PF03748 Flagellar basal body-associated protein FliL K08M4_RS00590 PF04345 Chorismate lyase K08M4_RS00595 PF01040 UbiA prenyltransferase family K08M4_RS00600 PF01553 Acyltransferase K08M4_RS00605 PF01219 Prokaryotic diacylglycerol kinase K08M4_RS00610 PF00717 Peptidase S24-like K08M4_RS00610 PF01726 LexA DNA binding domain K08M4_RS00615 PF04072 Leucine carboxyl methyltransferase K08M4_RS00620 PF01554 MatE K08M4_RS00625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_RS00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS00635 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS00645 PF05958 tRNA (Uracil-5-)-methyltransferase K08M4_RS00655 PF00593 TonB dependent receptor K08M4_RS00655 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS00665 PF01177 Asp/Glu/Hydantoin racemase K08M4_RS00730 PF13358 DDE superfamily endonuclease K08M4_RS00740 PF13358 DDE superfamily endonuclease K08M4_RS00750 PF13091 PLD-like domain K08M4_RS00760 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K08M4_RS00760 PF01565 FAD binding domain K08M4_RS00765 PF02237 Biotin protein ligase C terminal domain K08M4_RS00765 PF03099 Biotin/lipoate A/B protein ligase family K08M4_RS00765 PF08279 HTH domain K08M4_RS00770 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_RS00795 PF00009 Elongation factor Tu GTP binding domain K08M4_RS00795 PF03144 Elongation factor Tu domain 2 K08M4_RS00795 PF03143 Elongation factor Tu C-terminal domain K08M4_RS00800 PF00584 SecE/Sec61-gamma subunits of protein translocation complex K08M4_RS00805 PF02357 Transcription termination factor nusG K08M4_RS00805 PF00467 KOW motif K08M4_RS00810 PF00298 Ribosomal protein L11, RNA binding domain K08M4_RS00810 PF03946 Ribosomal protein L11, N-terminal domain K08M4_RS00815 PF00687 Ribosomal protein L1p/L10e family K08M4_RS00820 PF00466 Ribosomal protein L10 K08M4_RS00825 PF00542 Ribosomal protein L7/L12 C-terminal domain K08M4_RS00825 PF16320 Ribosomal protein L7/L12 dimerisation domain K08M4_RS00830 PF10385 RNA polymerase beta subunit external 1 domain K08M4_RS00830 PF04561 RNA polymerase Rpb2, domain 2 K08M4_RS00830 PF04560 RNA polymerase Rpb2, domain 7 K08M4_RS00830 PF00562 RNA polymerase Rpb2, domain 6 K08M4_RS00830 PF04565 RNA polymerase Rpb2, domain 3 K08M4_RS00830 PF04563 RNA polymerase beta subunit K08M4_RS00835 PF04997 RNA polymerase Rpb1, domain 1 K08M4_RS00835 PF04998 RNA polymerase Rpb1, domain 5 K08M4_RS00835 PF00623 RNA polymerase Rpb1, domain 2 K08M4_RS00835 PF04983 RNA polymerase Rpb1, domain 3 K08M4_RS00835 PF05000 RNA polymerase Rpb1, domain 4 K08M4_RS00840 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ K08M4_RS00845 PF09297 NADH pyrophosphatase zinc ribbon domain K08M4_RS00845 PF00293 NUDIX domain K08M4_RS00850 PF01208 Uroporphyrinogen decarboxylase (URO-D) K08M4_RS00855 PF03167 Uracil DNA glycosylase superfamily K08M4_RS00865 PF04222 Protein of unknown function (DUF416) K08M4_RS00870 PF00571 CBS domain K08M4_RS00870 PF01595 Cyclin M transmembrane N-terminal domain K08M4_RS00875 PF00216 Bacterial DNA-binding protein K08M4_RS00885 PF02844 Phosphoribosylglycinamide synthetase, N domain K08M4_RS00885 PF02843 Phosphoribosylglycinamide synthetase, C domain K08M4_RS00885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K08M4_RS00890 PF01808 AICARFT/IMPCHase bienzyme K08M4_RS00890 PF02142 MGS-like domain K08M4_RS00895 PF13411 MerR HTH family regulatory protein K08M4_RS00900 PF08448 PAS fold K08M4_RS00900 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS00905 PF02954 Bacterial regulatory protein, Fis family K08M4_RS00910 PF01207 Dihydrouridine synthase (Dus) K08M4_RS00920 PF00289 Biotin carboxylase, N-terminal domain K08M4_RS00920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K08M4_RS00920 PF02785 Biotin carboxylase C-terminal domain K08M4_RS00925 PF00364 Biotin-requiring enzyme K08M4_RS00930 PF01220 Dehydroquinase class II K08M4_RS00935 PF13193 AMP-binding enzyme C-terminal domain K08M4_RS00935 PF16177 Acetyl-coenzyme A synthetase N-terminus K08M4_RS00935 PF00501 AMP-binding enzyme K08M4_RS00950 PF12832 MFS_1 like family K08M4_RS00955 PF01627 Hpt domain K08M4_RS00955 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS00955 PF00672 HAMP domain K08M4_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS00955 PF00072 Response regulator receiver domain K08M4_RS00960 PF10415 Fumarase C C-terminus K08M4_RS00960 PF00206 Lyase K08M4_RS00970 PF00474 Sodium:solute symporter family K08M4_RS00980 PF03471 Transporter associated domain K08M4_RS00980 PF00999 Sodium/hydrogen exchanger family K08M4_RS00980 PF02080 TrkA-C domain K08M4_RS00985 PF00072 Response regulator receiver domain K08M4_RS00985 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS00990 PF02683 Cytochrome C biogenesis protein transmembrane region K08M4_RS00990 PF11412 Disulphide bond corrector protein DsbC K08M4_RS00995 PF02863 Arginine repressor, C-terminal domain K08M4_RS00995 PF01316 Arginine repressor, DNA binding domain K08M4_RS01000 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain K08M4_RS01000 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain K08M4_RS01005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_RS01005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_RS01015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_RS01015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_RS01020 PF00696 Amino acid kinase family K08M4_RS01030 PF03606 C4-dicarboxylate anaerobic carrier K08M4_RS01035 PF03605 Anaerobic c4-dicarboxylate membrane transporter K08M4_RS01040 PF10415 Fumarase C C-terminus K08M4_RS01040 PF00206 Lyase K08M4_RS01045 PF04186 FxsA cytoplasmic membrane protein K08M4_RS01050 PF00588 SpoU rRNA Methylase family K08M4_RS01055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K08M4_RS01055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K08M4_RS01060 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS01060 PF00672 HAMP domain K08M4_RS01060 PF16527 Two-component sensor protein CpxA, periplasmic domain K08M4_RS01065 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS01065 PF00072 Response regulator receiver domain K08M4_RS01075 PF01545 Cation efflux family K08M4_RS01075 PF16916 Dimerisation domain of Zinc Transporter K08M4_RS01080 PF00365 Phosphofructokinase K08M4_RS01085 PF00121 Triosephosphate isomerase K08M4_RS01095 PF05656 Protein of unknown function (DUF805) K08M4_RS01110 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K08M4_RS01115 PF06005 Cell division protein ZapB K08M4_RS01120 PF03737 Aldolase/RraA K08M4_RS01125 PF01040 UbiA prenyltransferase family K08M4_RS01130 PF07724 AAA domain (Cdc48 subfamily) K08M4_RS01130 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_RS01135 PF00227 Proteasome subunit K08M4_RS01145 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS01150 PF00271 Helicase conserved C-terminal domain K08M4_RS01150 PF18074 Primosomal protein N C-terminal domain K08M4_RS01150 PF00270 DEAD/DEAH box helicase K08M4_RS01150 PF18319 PriA DNA helicase Cys-rich region (CRR) domain K08M4_RS01150 PF17764 3′ DNA-binding domain (3′BD) K08M4_RS01155 PF01197 Ribosomal protein L31 K08M4_RS01160 PF03949 Malic enzyme, NAD binding domain K08M4_RS01160 PF00390 Malic enzyme, N-terminal domain K08M4_RS01165 PF01340 Met Apo-repressor, MetJ K08M4_RS01170 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M4_RS01175 PF00696 Amino acid kinase family K08M4_RS01175 PF00742 Homoserine dehydrogenase K08M4_RS01175 PF03447 Homoserine dehydrogenase, NAD binding domain K08M4_RS01180 PF02219 Methylenetetrahydrofolate reductase K08M4_RS01190 PF00311 Phosphoenolpyruvate carboxylase K08M4_RS01195 PF01546 Peptidase family M20/M25/M40 K08M4_RS01195 PF07687 Peptidase dimerisation domain K08M4_RS01200 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M4_RS01200 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M4_RS01205 PF00696 Amino acid kinase family K08M4_RS01210 PF00764 Arginosuccinate synthase K08M4_RS01215 PF00583 Acetyltransferase (GNAT) family K08M4_RS01215 PF14698 Argininosuccinate lyase C-terminal K08M4_RS01215 PF00206 Lyase K08M4_RS01225 PF01042 Endoribonuclease L-PSP K08M4_RS01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_RS01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS01235 PF08534 Redoxin K08M4_RS01235 PF00462 Glutaredoxin K08M4_RS01245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS01245 PF03466 LysR substrate binding domain K08M4_RS01250 PF17092 Penicillin-binding protein OB-like domain K08M4_RS01250 PF00905 Penicillin binding protein transpeptidase domain K08M4_RS01250 PF00912 Transglycosylase K08M4_RS01275 PF07660 Secretin and TonB N terminus short domain K08M4_RS01275 PF03958 Bacterial type II/III secretion system short domain K08M4_RS01275 PF00263 Bacterial type II and III secretion system protein K08M4_RS01275 PF11741 AMIN domain K08M4_RS01280 PF01202 Shikimate kinase K08M4_RS01285 PF01761 3-dehydroquinate synthase K08M4_RS01295 PF02086 D12 class N6 adenine-specific DNA methyltransferase K08M4_RS01300 PF00834 Ribulose-phosphate 3 epimerase family K08M4_RS01305 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS01310 PF00579 tRNA synthetases class I (W and Y) K08M4_RS01320 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS01320 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS01320 PF00563 EAL domain K08M4_RS01325 PF00117 Glutamine amidotransferase class-I K08M4_RS01330 PF00202 Aminotransferase class-III K08M4_RS01335 PF04958 Arginine N-succinyltransferase beta subunit K08M4_RS01340 PF00171 Aldehyde dehydrogenase family K08M4_RS01350 PF00027 Cyclic nucleotide-binding domain K08M4_RS01350 PF13545 Crp-like helix-turn-helix domain K08M4_RS01355 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_RS01360 PF06794 Uncharacterised protein family (UPF0270) K08M4_RS01365 PF00561 alpha/beta hydrolase fold K08M4_RS01375 PF12848 ABC transporter K08M4_RS01375 PF00005 ABC transporter K08M4_RS01380 PF02525 Flavodoxin-like fold K08M4_RS01385 PF02254 TrkA-N domain K08M4_RS01385 PF00999 Sodium/hydrogen exchanger family K08M4_RS01395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_RS01400 PF01112 Asparaginase K08M4_RS01405 PF04102 SlyX K08M4_RS01415 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M4_RS01415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_RS01420 PF08348 YheO-like PAS domain K08M4_RS01420 PF13309 HTH domain K08M4_RS01425 PF02635 DsrE/DsrF-like family K08M4_RS01430 PF02635 DsrE/DsrF-like family K08M4_RS01440 PF00164 Ribosomal protein S12/S23 K08M4_RS01445 PF00177 Ribosomal protein S7p/S5e K08M4_RS01450 PF00679 Elongation factor G C-terminus K08M4_RS01450 PF00009 Elongation factor Tu GTP binding domain K08M4_RS01450 PF03144 Elongation factor Tu domain 2 K08M4_RS01450 PF03764 Elongation factor G, domain IV K08M4_RS01450 PF14492 Elongation Factor G, domain II K08M4_RS01455 PF03144 Elongation factor Tu domain 2 K08M4_RS01455 PF03143 Elongation factor Tu C-terminal domain K08M4_RS01455 PF00009 Elongation factor Tu GTP binding domain K08M4_RS01460 PF00338 Ribosomal protein S10p/S20e K08M4_RS01465 PF00297 Ribosomal protein L3 K08M4_RS01470 PF00573 Ribosomal protein L4/L1 family K08M4_RS01475 PF00276 Ribosomal protein L23 K08M4_RS01480 PF03947 Ribosomal Proteins L2, C-terminal domain K08M4_RS01480 PF00181 Ribosomal Proteins L2, RNA binding domain K08M4_RS01485 PF00203 Ribosomal protein S19 K08M4_RS01490 PF00237 Ribosomal protein L22p/L17e K08M4_RS01495 PF00189 Ribosomal protein S3, C-terminal domain K08M4_RS01495 PF07650 KH domain K08M4_RS01500 PF00252 Ribosomal protein L16p/L10e K08M4_RS01505 PF00831 Ribosomal L29 protein K08M4_RS01510 PF00366 Ribosomal protein S17 K08M4_RS01515 PF00238 Ribosomal protein L14p/L23e K08M4_RS01520 PF00467 KOW motif K08M4_RS01520 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 K08M4_RS01525 PF00673 ribosomal L5P family C-terminus K08M4_RS01525 PF00281 Ribosomal protein L5 K08M4_RS01530 PF00253 Ribosomal protein S14p/S29e K08M4_RS01535 PF00410 Ribosomal protein S8 K08M4_RS01540 PF00347 Ribosomal protein L6 K08M4_RS01545 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K08M4_RS01550 PF03719 Ribosomal protein S5, C-terminal domain K08M4_RS01550 PF00333 Ribosomal protein S5, N-terminal domain K08M4_RS01555 PF00327 Ribosomal protein L30p/L7e K08M4_RS01560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K08M4_RS01565 PF00344 SecY translocase K08M4_RS01570 PF00444 Ribosomal protein L36 K08M4_RS01575 PF00416 Ribosomal protein S13/S18 K08M4_RS01580 PF00411 Ribosomal protein S11 K08M4_RS01585 PF01479 S4 domain K08M4_RS01585 PF00163 Ribosomal protein S4/S9 N-terminal domain K08M4_RS01590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain K08M4_RS01590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain K08M4_RS01590 PF01000 RNA polymerase Rpb3/RpoA insert domain K08M4_RS01595 PF01196 Ribosomal protein L17 K08M4_RS01605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_RS01605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M4_RS01610 PF08525 Opacity-associated protein A N-terminal motif K08M4_RS01610 PF04225 Opacity-associated protein A LysM-like domain K08M4_RS01620 PF13673 Acetyltransferase (GNAT) domain K08M4_RS01660 PF02872 5'-nucleotidase, C-terminal domain K08M4_RS01660 PF00149 Calcineurin-like phosphoesterase K08M4_RS01665 PF01507 Phosphoadenosine phosphosulfate reductase family K08M4_RS01670 PF00009 Elongation factor Tu GTP binding domain K08M4_RS01675 PF03600 Citrate transporter K08M4_RS01675 PF02080 TrkA-C domain K08M4_RS01700 PF00005 ABC transporter K08M4_RS01715 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) K08M4_RS01720 PF06526 Protein of unknown function (DUF1107) K08M4_RS01725 PF01625 Peptide methionine sulfoxide reductase K08M4_RS01730 PF07244 Surface antigen variable number repeat K08M4_RS01730 PF17243 POTRA domain TamA domain 1 K08M4_RS01730 PF01103 Surface antigen K08M4_RS01735 PF04357 TamB, inner membrane protein subunit of TAM complex K08M4_RS01740 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like K08M4_RS01745 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain K08M4_RS01750 PF01225 Mur ligase family, catalytic domain K08M4_RS01750 PF02875 Mur ligase family, glutamate ligase domain K08M4_RS01750 PF08245 Mur ligase middle domain K08M4_RS01755 PF02441 Flavoprotein K08M4_RS01765 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS01770 PF00005 ABC transporter K08M4_RS01775 PF04751 Protein of unknown function (DUF615) K08M4_RS01780 PF01523 Putative modulator of DNA gyrase K08M4_RS01785 PF00571 CBS domain K08M4_RS01785 PF01769 Divalent cation transporter K08M4_RS01785 PF03448 MgtE intracellular N domain K08M4_RS01790 PF00381 PTS HPr component phosphorylation site K08M4_RS01795 PF03668 P-loop ATPase protein family K08M4_RS01800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_RS01805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K08M4_RS01810 PF04552 Sigma-54, DNA binding domain K08M4_RS01810 PF00309 Sigma-54 factor, Activator interacting domain (AID) K08M4_RS01810 PF04963 Sigma-54 factor, core binding domain K08M4_RS01815 PF12399 Branched-chain amino acid ATP-binding cassette transporter K08M4_RS01815 PF00005 ABC transporter K08M4_RS01820 PF03968 OstA-like protein K08M4_RS01835 PF01380 SIS domain K08M4_RS01835 PF00571 CBS domain K08M4_RS01840 PF01699 Sodium/calcium exchanger protein K08M4_RS01845 PF00005 ABC transporter K08M4_RS01850 PF02405 Permease MlaE K08M4_RS01855 PF02470 MlaD protein K08M4_RS01860 PF05494 MlaC protein K08M4_RS01870 PF01722 BolA-like protein K08M4_RS01875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K08M4_RS01880 PF01553 Acyltransferase K08M4_RS01885 PF01042 Endoribonuclease L-PSP K08M4_RS01890 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain K08M4_RS01890 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain K08M4_RS01895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_RS01895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_RS01900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_RS01900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_RS01910 PF06877 Regulator of ribonuclease activity B K08M4_RS01920 PF00583 Acetyltransferase (GNAT) family K08M4_RS01930 PF08264 Anticodon-binding domain of tRNA K08M4_RS01930 PF00133 tRNA synthetases class I (I, L, M and V) K08M4_RS01930 PF10458 Valyl tRNA synthetase tRNA binding arm K08M4_RS01935 PF04364 DNA polymerase III chi subunit, HolC K08M4_RS01940 PF02789 Cytosol aminopeptidase family, N-terminal domain K08M4_RS01940 PF00883 Cytosol aminopeptidase family, catalytic domain K08M4_RS01945 PF03739 Lipopolysaccharide export system permease LptF/LptG K08M4_RS01950 PF03739 Lipopolysaccharide export system permease LptF/LptG K08M4_RS01970 PF00072 Response regulator receiver domain K08M4_RS02060 PF00672 HAMP domain K08M4_RS02060 PF17200 Single Cache domain 2 K08M4_RS02060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS02100 PF01464 Transglycosylase SLT domain K08M4_RS02100 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain K08M4_RS02105 PF04362 Bacterial Fe(2+) trafficking K08M4_RS02110 PF14815 NUDIX domain K08M4_RS02110 PF00730 HhH-GPD superfamily base excision DNA repair protein K08M4_RS02110 PF00633 Helix-hairpin-helix motif K08M4_RS02115 PF02390 Putative methyltransferase K08M4_RS02120 PF04960 Glutaminase K08M4_RS02125 PF06969 HemN C-terminal domain K08M4_RS02125 PF04055 Radical SAM superfamily K08M4_RS02130 PF01725 Ham1 family K08M4_RS02140 PF02594 Uncharacterised ACR, YggU family COG1872 K08M4_RS02145 PF02325 YGGT family K08M4_RS02150 PF14748 Pyrroline-5-carboxylate reductase dimerisation K08M4_RS02150 PF03807 NADP oxidoreductase coenzyme F420-dependent K08M4_RS02155 PF01168 Alanine racemase, N-terminal domain K08M4_RS02160 PF00437 Type II/IV secretion system protein K08M4_RS02165 PF00437 Type II/IV secretion system protein K08M4_RS02170 PF03652 Holliday junction resolvase K08M4_RS02175 PF02622 Uncharacterized ACR, COG1678 K08M4_RS02180 PF02951 Prokaryotic glutathione synthetase, N-terminal domain K08M4_RS02180 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain K08M4_RS02185 PF04452 RNA methyltransferase K08M4_RS02195 PF04231 Endonuclease I K08M4_RS02200 PF10263 SprT-like family K08M4_RS02200 PF17283 SprT-like zinc ribbon domain K08M4_RS02210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K08M4_RS02210 PF07685 CobB/CobQ-like glutamine amidotransferase domain K08M4_RS02215 PF00155 Aminotransferase class I and II K08M4_RS02220 PF03186 CobD/Cbib protein K08M4_RS02225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_RS02230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_RS02230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_RS02235 PF06180 Cobalt chelatase (CbiK) K08M4_RS02240 PF11761 Cobalamin biosynthesis central region K08M4_RS02240 PF01890 Cobalamin synthesis G C-terminus K08M4_RS02240 PF11760 Cobalamin synthesis G N-terminal K08M4_RS02245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_RS02250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_RS02255 PF02570 Precorrin-8X methylmutase K08M4_RS02260 PF01888 CbiD K08M4_RS02265 PF00300 Histidine phosphatase superfamily (branch 1) K08M4_RS02270 PF01032 FecCD transport family K08M4_RS02280 PF00005 ABC transporter K08M4_RS02285 PF02773 S-adenosylmethionine synthetase, C-terminal domain K08M4_RS02285 PF00438 S-adenosylmethionine synthetase, N-terminal domain K08M4_RS02285 PF02772 S-adenosylmethionine synthetase, central domain K08M4_RS02290 PF02779 Transketolase, pyrimidine binding domain K08M4_RS02290 PF02780 Transketolase, C-terminal domain K08M4_RS02290 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_RS02300 PF00072 Response regulator receiver domain K08M4_RS02300 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS02305 PF01627 Hpt domain K08M4_RS02305 PF00072 Response regulator receiver domain K08M4_RS02305 PF00989 PAS fold K08M4_RS02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS02305 PF18415 Histidine kinase receptor ArcB trans-membrane domain K08M4_RS02305 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS02315 PF00367 phosphotransferase system, EIIB K08M4_RS02315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K08M4_RS02315 PF02378 Phosphotransferase system, EIIC K08M4_RS02320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_RS02320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_RS02325 PF00162 Phosphoglycerate kinase K08M4_RS02330 PF01116 Fructose-bisphosphate aldolase class-II K08M4_RS02335 PF00924 Mechanosensitive ion channel K08M4_RS02335 PF05552 Conserved TM helix K08M4_RS02340 PF01810 LysE type translocator K08M4_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS02345 PF03466 LysR substrate binding domain K08M4_RS02355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_RS02355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_RS02355 PF01842 ACT domain K08M4_RS02360 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K08M4_RS02365 PF01812 5-formyltetrahydrofolate cyclo-ligase family K08M4_RS02375 PF05164 Cell division protein ZapA K08M4_RS02380 PF03695 Uncharacterised protein family (UPF0149) K08M4_RS02385 PF01494 FAD binding domain K08M4_RS02390 PF01494 FAD binding domain K08M4_RS02410 PF03937 Flavinator of succinate dehydrogenase K08M4_RS02420 PF02910 Fumarate reductase flavoprotein C-term K08M4_RS02420 PF00890 FAD binding domain K08M4_RS02425 PF04542 Sigma-70 region 2 K08M4_RS02425 PF08281 Sigma-70, region 4 K08M4_RS02430 PF03873 Anti sigma-E protein RseA, C-terminal domain K08M4_RS02430 PF03872 Anti sigma-E protein RseA, N-terminal domain K08M4_RS02435 PF17188 MucB/RseB C-terminal domain K08M4_RS02435 PF03888 MucB/RseB N-terminal domain K08M4_RS02445 PF00679 Elongation factor G C-terminus K08M4_RS02445 PF03144 Elongation factor Tu domain 2 K08M4_RS02445 PF06421 GTP-binding protein LepA C-terminus K08M4_RS02445 PF00009 Elongation factor Tu GTP binding domain K08M4_RS02450 PF10502 Signal peptidase, peptidase S26 K08M4_RS02455 PF00035 Double-stranded RNA binding motif K08M4_RS02455 PF14622 Ribonuclease-III-like K08M4_RS02460 PF07650 KH domain K08M4_RS02460 PF01926 50S ribosome-binding GTPase K08M4_RS02465 PF11967 Recombination protein O N terminal K08M4_RS02465 PF02565 Recombination protein O C terminal K08M4_RS02470 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ K08M4_RS02475 PF01648 4'-phosphopantetheinyl transferase superfamily K08M4_RS02480 PF00072 Response regulator receiver domain K08M4_RS02480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K08M4_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS02480 PF01627 Hpt domain K08M4_RS02480 PF00672 HAMP domain K08M4_RS02480 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS02490 PF05958 tRNA (Uracil-5-)-methyltransferase K08M4_RS02490 PF01938 TRAM domain K08M4_RS02495 PF13291 ACT domain K08M4_RS02495 PF04607 Region found in RelA / SpoT proteins K08M4_RS02495 PF02824 TGS domain K08M4_RS02500 PF03819 MazG nucleotide pyrophosphohydrolase domain K08M4_RS02505 PF00117 Glutamine amidotransferase class-I K08M4_RS02505 PF06418 CTP synthase N-terminus K08M4_RS02510 PF03952 Enolase, N-terminal domain K08M4_RS02510 PF00113 Enolase, C-terminal TIM barrel domain K08M4_RS02515 PF04977 Septum formation initiator K08M4_RS02520 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K08M4_RS02525 PF02542 YgbB family K08M4_RS02530 PF01142 tRNA pseudouridine synthase D (TruD) K08M4_RS02535 PF01975 Survival protein SurE K08M4_RS02545 PF01551 Peptidase family M23 K08M4_RS02545 PF01476 LysM domain K08M4_RS02550 PF04539 Sigma-70 region 3 K08M4_RS02550 PF04545 Sigma-70, region 4 K08M4_RS02550 PF04542 Sigma-70 region 2 K08M4_RS02550 PF00140 Sigma-70 factor, region 1.2 K08M4_RS02555 PF01624 MutS domain I K08M4_RS02555 PF00488 MutS domain V K08M4_RS02555 PF05190 MutS family domain IV K08M4_RS02555 PF05192 MutS domain III K08M4_RS02555 PF05188 MutS domain II K08M4_RS02560 PF02464 Competence-damaged protein K08M4_RS02565 PF00154 recA bacterial DNA recombination protein K08M4_RS02580 PF16657 Maltogenic Amylase, C-terminal domain K08M4_RS02580 PF02903 Alpha amylase, N-terminal ig-like domain K08M4_RS02580 PF00128 Alpha amylase, catalytic domain K08M4_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS02595 PF13416 Bacterial extracellular solute-binding protein K08M4_RS02605 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K08M4_RS02605 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS02615 PF17912 MalK OB fold domain K08M4_RS02615 PF00005 ABC transporter K08M4_RS02620 PF00128 Alpha amylase, catalytic domain K08M4_RS02620 PF00686 Starch binding domain K08M4_RS02625 PF01411 tRNA synthetases class II (A) K08M4_RS02625 PF02272 DHHA1 domain K08M4_RS02625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M4_RS02630 PF13840 ACT domain K08M4_RS02630 PF00696 Amino acid kinase family K08M4_RS02630 PF01842 ACT domain K08M4_RS02635 PF02599 Global regulator protein family K08M4_RS02690 PF04277 Oxaloacetate decarboxylase, gamma chain K08M4_RS02695 PF00682 HMGL-like K08M4_RS02695 PF00364 Biotin-requiring enzyme K08M4_RS02695 PF02436 Conserved carboxylase domain K08M4_RS02700 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit K08M4_RS02705 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_RS02705 PF00107 Zinc-binding dehydrogenase K08M4_RS02710 PF09335 SNARE associated Golgi protein K08M4_RS02715 PF05193 Peptidase M16 inactive domain K08M4_RS02715 PF00675 Insulinase (Peptidase family M16) K08M4_RS02720 PF04262 Glutamate-cysteine ligase K08M4_RS02730 PF02664 S-Ribosylhomocysteinase (LuxS) K08M4_RS02735 PF01595 Cyclin M transmembrane N-terminal domain K08M4_RS02735 PF00571 CBS domain K08M4_RS02735 PF03471 Transporter associated domain K08M4_RS02740 PF01578 Cytochrome C assembly protein K08M4_RS02745 PF00448 SRP54-type protein, GTPase domain K08M4_RS02745 PF02881 SRP54-type protein, helical bundle domain K08M4_RS02745 PF02978 Signal peptide binding domain K08M4_RS02750 PF00886 Ribosomal protein S16 K08M4_RS02755 PF01782 RimM N-terminal domain K08M4_RS02755 PF05239 PRC-barrel domain K08M4_RS02760 PF01746 tRNA (Guanine-1)-methyltransferase K08M4_RS02765 PF01245 Ribosomal protein L19 K08M4_RS02770 PF03884 DNA gyrase inhibitor YacG K08M4_RS02775 PF07072 Cell division protein K08M4_RS02780 PF01121 Dephospho-CoA kinase K08M4_RS02785 PF06750 Bacterial Peptidase A24 N-terminal domain K08M4_RS02785 PF01478 Type IV leader peptidase family K08M4_RS02790 PF00482 Type II secretion system (T2SS), protein F K08M4_RS02795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K08M4_RS02795 PF00437 Type II/IV secretion system protein K08M4_RS02800 PF00114 Pilin (bacterial filament) K08M4_RS02800 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS02805 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain K08M4_RS02805 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain K08M4_RS02810 PF01510 N-acetylmuramoyl-L-alanine amidase K08M4_RS02820 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS02820 PF07729 FCD domain K08M4_RS02825 PF17831 Pyruvate dehydrogenase E1 component middle domain K08M4_RS02825 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_RS02830 PF02817 e3 binding domain K08M4_RS02830 PF00364 Biotin-requiring enzyme K08M4_RS02830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K08M4_RS02835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_RS02835 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS02840 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS02845 PF00156 Phosphoribosyl transferase domain K08M4_RS02850 PF00484 Carbonic anhydrase K08M4_RS02855 PF00916 Sulfate permease family K08M4_RS02855 PF01740 STAS domain K08M4_RS02860 PF00005 ABC transporter K08M4_RS02865 PF01061 ABC-2 type transporter K08M4_RS02870 PF02569 Pantoate-beta-alanine ligase K08M4_RS02875 PF02548 Ketopantoate hydroxymethyltransferase K08M4_RS02880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M4_RS02885 PF12626 Polymerase A arginine-rich C-terminus K08M4_RS02885 PF01743 Poly A polymerase head domain K08M4_RS02885 PF12627 Probable RNA and SrmB- binding site of polymerase A K08M4_RS02890 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M4_RS02895 PF01258 Prokaryotic dksA/traR C4-type zinc finger K08M4_RS02900 PF03749 Sugar fermentation stimulation protein RE domain K08M4_RS02900 PF17746 SfsA N-terminal OB domain K08M4_RS02905 PF04408 Helicase associated domain (HA2) K08M4_RS02905 PF08482 ATP-dependent helicase C-terminal K08M4_RS02905 PF00271 Helicase conserved C-terminal domain K08M4_RS02905 PF00270 DEAD/DEAH box helicase K08M4_RS02910 PF00912 Transglycosylase K08M4_RS02910 PF00905 Penicillin binding protein transpeptidase domain K08M4_RS02910 PF14814 Bifunctional transglycosylase second domain K08M4_RS02915 PF01734 Patatin-like phospholipase K08M4_RS02920 PF11791 Aconitate B N-terminal domain K08M4_RS02920 PF06434 Aconitate hydratase 2 N-terminus K08M4_RS02920 PF00330 Aconitase family (aconitate hydratase) K08M4_RS02925 PF06062 Uncharacterised protein family (UPF0231) K08M4_RS02930 PF00543 Nitrogen regulatory protein P-II K08M4_RS02935 PF00909 Ammonium Transporter Family K08M4_RS02940 PF13416 Bacterial extracellular solute-binding protein K08M4_RS02950 PF08402 TOBE domain K08M4_RS02950 PF00005 ABC transporter K08M4_RS02955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_RS02955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_RS02955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_RS02955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_RS02960 PF06165 Glycosyltransferase family 36 K08M4_RS02960 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain K08M4_RS02965 PF00728 Glycosyl hydrolase family 20, catalytic domain K08M4_RS02965 PF02838 Glycosyl hydrolase family 20, domain 2 K08M4_RS02970 PF01869 BadF/BadG/BcrA/BcrD ATPase family K08M4_RS02980 PF00005 ABC transporter K08M4_RS02980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS02985 PF00005 ABC transporter K08M4_RS02985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS02990 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS02990 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M4_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS03000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS03005 PF00672 HAMP domain K08M4_RS03005 PF00072 Response regulator receiver domain K08M4_RS03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS03005 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS03005 PF01627 Hpt domain K08M4_RS03005 PF17149 Periplasmic sensor domain found in signal transduction proteins K08M4_RS03010 PF08468 Methyltransferase small domain N-terminal K08M4_RS03010 PF05175 Methyltransferase small domain K08M4_RS03015 PF01594 AI-2E family transporter K08M4_RS03020 PF00202 Aminotransferase class-III K08M4_RS03025 PF01521 Iron-sulphur cluster biosynthesis K08M4_RS03035 PF00873 AcrB/AcrD/AcrF family K08M4_RS03040 PF01551 Peptidase family M23 K08M4_RS03040 PF01476 LysM domain K08M4_RS03040 PF08525 Opacity-associated protein A N-terminal motif K08M4_RS03045 PF00579 tRNA synthetases class I (W and Y) K08M4_RS03050 PF00571 CBS domain K08M4_RS03050 PF01769 Divalent cation transporter K08M4_RS03050 PF03448 MgtE intracellular N domain K08M4_RS03055 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family K08M4_RS03060 PF13609 Gram-negative porin K08M4_RS03065 PF03449 Transcription elongation factor, N-terminal K08M4_RS03065 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M4_RS03070 PF01985 CRS1 / YhbY (CRM) domain K08M4_RS03075 PF01728 FtsJ-like methyltransferase K08M4_RS03080 PF01434 Peptidase family M41 K08M4_RS03080 PF06480 FtsH Extracellular K08M4_RS03080 PF17862 AAA+ lid domain K08M4_RS03080 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_RS03085 PF00809 Pterin binding enzyme K08M4_RS03090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_RS03090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_RS03090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_RS03090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_RS03100 PF03840 Preprotein translocase SecG subunit K08M4_RS03115 PF17384 RimP C-terminal SH3 domain K08M4_RS03115 PF02576 RimP N-terminal domain K08M4_RS03120 PF13184 NusA-like KH domain K08M4_RS03120 PF08529 NusA N-terminal domain K08M4_RS03120 PF00575 S1 RNA binding domain K08M4_RS03125 PF00009 Elongation factor Tu GTP binding domain K08M4_RS03125 PF11987 Translation-initiation factor 2 K08M4_RS03125 PF08364 Bacterial translation initiation factor IF-2 associated region K08M4_RS03125 PF04760 Translation initiation factor IF-2, N-terminal region K08M4_RS03130 PF02033 Ribosome-binding factor A K08M4_RS03135 PF09157 Pseudouridine synthase II TruB, C-terminal K08M4_RS03135 PF01509 TruB family pseudouridylate synthase (N terminal domain) K08M4_RS03135 PF16198 tRNA pseudouridylate synthase B C-terminal domain K08M4_RS03140 PF00312 Ribosomal protein S15 K08M4_RS03145 PF01138 3' exoribonuclease family, domain 1 K08M4_RS03145 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain K08M4_RS03145 PF00013 KH domain K08M4_RS03145 PF03725 3' exoribonuclease family, domain 2 K08M4_RS03145 PF00575 S1 RNA binding domain K08M4_RS03150 PF13181 Tetratricopeptide repeat K08M4_RS03150 PF07719 Tetratricopeptide repeat K08M4_RS03160 PF01554 MatE K08M4_RS03165 PF01136 Peptidase family U32 K08M4_RS03170 PF01136 Peptidase family U32 K08M4_RS03175 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS03175 PF00563 EAL domain K08M4_RS03175 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS03180 PF02036 SCP-2 sterol transfer family K08M4_RS03185 PF13508 Acetyltransferase (GNAT) domain K08M4_RS03195 PF00583 Acetyltransferase (GNAT) family K08M4_RS03200 PF03144 Elongation factor Tu domain 2 K08M4_RS03200 PF16658 Class II release factor RF3, C-terminal domain K08M4_RS03200 PF00009 Elongation factor Tu GTP binding domain K08M4_RS03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS03205 PF03466 LysR substrate binding domain K08M4_RS03220 PF01026 TatD related DNase K08M4_RS03225 PF07670 Nucleoside recognition K08M4_RS03225 PF07662 Na+ dependent nucleoside transporter C-terminus K08M4_RS03225 PF01773 Na+ dependent nucleoside transporter N-terminus K08M4_RS03230 PF01791 DeoC/LacD family aldolase K08M4_RS03235 PF02885 Glycosyl transferase family, helical bundle domain K08M4_RS03235 PF00591 Glycosyl transferase family, a/b domain K08M4_RS03235 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain K08M4_RS03240 PF01676 Metalloenzyme superfamily K08M4_RS03245 PF01048 Phosphorylase superfamily K08M4_RS03255 PF18429 Domain of unknown function (DUF5609) K08M4_RS03265 PF18073 Rubredoxin metal binding domain K08M4_RS03270 PF03764 Elongation factor G, domain IV K08M4_RS03270 PF00009 Elongation factor Tu GTP binding domain K08M4_RS03270 PF03144 Elongation factor Tu domain 2 K08M4_RS03270 PF00679 Elongation factor G C-terminus K08M4_RS03270 PF14492 Elongation Factor G, domain II K08M4_RS03300 PF09905 DNA-binding protein VF530 K08M4_RS03325 PF00501 AMP-binding enzyme K08M4_RS03330 PF12833 Helix-turn-helix domain K08M4_RS03330 PF02311 AraC-like ligand binding domain K08M4_RS03355 PF04972 BON domain K08M4_RS03355 PF13629 Pilus formation protein N terminal region K08M4_RS03355 PF00263 Bacterial type II and III secretion system protein K08M4_RS03385 PF00437 Type II/IV secretion system protein K08M4_RS03415 PF01209 ubiE/COQ5 methyltransferase family K08M4_RS03420 PF02417 Chromate transporter K08M4_RS03425 PF03466 LysR substrate binding domain K08M4_RS03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS03455 PF07687 Peptidase dimerisation domain K08M4_RS03455 PF01546 Peptidase family M20/M25/M40 K08M4_RS03460 PF00860 Permease family K08M4_RS03465 PF00156 Phosphoribosyl transferase domain K08M4_RS03470 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) K08M4_RS03475 PF07417 Sigma factor-binding transcriptional regulator Crl K08M4_RS03480 PF00696 Amino acid kinase family K08M4_RS03480 PF01472 PUA domain K08M4_RS03485 PF00171 Aldehyde dehydrogenase family K08M4_RS03490 PF03477 ATP cone domain K08M4_RS03495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_RS03495 PF01872 RibD C-terminal domain K08M4_RS03500 PF00677 Lumazine binding domain K08M4_RS03505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K08M4_RS03505 PF00925 GTP cyclohydrolase II K08M4_RS03510 PF00885 6,7-dimethyl-8-ribityllumazine synthase K08M4_RS03515 PF01029 NusB family K08M4_RS03520 PF02769 AIR synthase related protein, C-terminal domain K08M4_RS03520 PF00586 AIR synthase related protein, N-terminal domain K08M4_RS03525 PF04608 Phosphatidylglycerophosphatase A K08M4_RS03530 PF02779 Transketolase, pyrimidine binding domain K08M4_RS03530 PF02780 Transketolase, C-terminal domain K08M4_RS03530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase K08M4_RS03535 PF00348 Polyprenyl synthetase K08M4_RS03540 PF02609 Exonuclease VII small subunit K08M4_RS03545 PF01618 MotA/TolQ/ExbB proton channel family K08M4_RS03550 PF13677 Membrane MotB of proton-channel complex MotA/MotB K08M4_RS03550 PF00691 OmpA family K08M4_RS03555 PF02926 THUMP domain K08M4_RS03555 PF02568 Thiamine biosynthesis protein (ThiI) K08M4_RS03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS03560 PF03466 LysR substrate binding domain K08M4_RS03575 PF18125 RlmM ferredoxin-like domain K08M4_RS03575 PF01728 FtsJ-like methyltransferase K08M4_RS03580 PF00593 TonB dependent receptor K08M4_RS03580 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS03585 PF04055 Radical SAM superfamily K08M4_RS03585 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family K08M4_RS03590 PF03099 Biotin/lipoate A/B protein ligase family K08M4_RS03595 PF04359 Protein of unknown function (DUF493) K08M4_RS03600 PF00768 D-alanyl-D-alanine carboxypeptidase K08M4_RS03600 PF07943 Penicillin-binding protein 5, C-terminal domain K08M4_RS03605 PF03330 Lytic transglycolase K08M4_RS03605 PF05036 Sporulation related domain K08M4_RS03610 PF01098 Cell cycle protein K08M4_RS03615 PF00905 Penicillin binding protein transpeptidase domain K08M4_RS03615 PF03717 Penicillin-binding Protein dimerisation domain K08M4_RS03620 PF02590 Predicted SPOUT methyltransferase K08M4_RS03630 PF06144 DNA polymerase III, delta subunit K08M4_RS03630 PF14840 Processivity clamp loader gamma complex DNA pol III C-term K08M4_RS03635 PF04390 Lipopolysaccharide-assembly K08M4_RS03640 PF00133 tRNA synthetases class I (I, L, M and V) K08M4_RS03640 PF08264 Anticodon-binding domain of tRNA K08M4_RS03640 PF13603 Leucyl-tRNA synthetase, Domain 2 K08M4_RS03645 PF07295 Zinc-ribbon containing domain K08M4_RS03650 PF00795 Carbon-nitrogen hydrolase K08M4_RS03655 PF03471 Transporter associated domain K08M4_RS03655 PF00571 CBS domain K08M4_RS03660 PF02130 Uncharacterized protein family UPF0054 K08M4_RS03665 PF02562 PhoH-like protein K08M4_RS03670 PF00919 Uncharacterized protein family UPF0004 K08M4_RS03670 PF04055 Radical SAM superfamily K08M4_RS03670 PF01938 TRAM domain K08M4_RS03675 PF01494 FAD binding domain K08M4_RS03680 PF10282 Lactonase, 7-bladed beta-propeller K08M4_RS03780 PF06071 Protein of unknown function (DUF933) K08M4_RS03780 PF01926 50S ribosome-binding GTPase K08M4_RS03785 PF01195 Peptidyl-tRNA hydrolase K08M4_RS03790 PF14572 Phosphoribosyl synthetase-associated domain K08M4_RS03790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K08M4_RS03795 PF08544 GHMP kinases C terminal K08M4_RS03795 PF00288 GHMP kinases N terminal domain K08M4_RS03800 PF03550 Outer membrane lipoprotein LolB K08M4_RS03805 PF01488 Shikimate / quinate 5-dehydrogenase K08M4_RS03805 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain K08M4_RS03805 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain K08M4_RS03810 PF03462 PCRF domain K08M4_RS03810 PF00472 RF-1 domain K08M4_RS03815 PF13847 Methyltransferase domain K08M4_RS03815 PF17827 PrmC N-terminal domain K08M4_RS03820 PF04247 Invasion gene expression up-regulator, SirB K08M4_RS03825 PF13369 Transglutaminase-like superfamily K08M4_RS03830 PF00793 DAHP synthetase I family K08M4_RS03835 PF00149 Calcineurin-like phosphoesterase K08M4_RS03835 PF02872 5'-nucleotidase, C-terminal domain K08M4_RS03840 PF04073 Aminoacyl-tRNA editing domain K08M4_RS03845 PF01479 S4 domain K08M4_RS03845 PF00849 RNA pseudouridylate synthase K08M4_RS03850 PF01713 Smr domain K08M4_RS03870 PF02838 Glycosyl hydrolase family 20, domain 2 K08M4_RS03870 PF03173 Putative carbohydrate binding domain K08M4_RS03870 PF00728 Glycosyl hydrolase family 20, catalytic domain K08M4_RS03870 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain K08M4_RS03885 PF00403 Heavy-metal-associated domain K08M4_RS03890 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M4_RS03895 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_RS03895 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_RS03910 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_RS03910 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_RS03935 PF00221 Aromatic amino acid lyase K08M4_RS03940 PF00535 Glycosyl transferase family 2 K08M4_RS03950 PF00501 AMP-binding enzyme K08M4_RS03950 PF13193 AMP-binding enzyme C-terminal domain K08M4_RS03960 PF00550 Phosphopantetheine attachment site K08M4_RS03965 PF00550 Phosphopantetheine attachment site K08M4_RS03990 PF04820 Tryptophan halogenase K08M4_RS04025 PF13144 Chaperone for flagella basal body P-ring formation K08M4_RS04030 PF01584 CheW-like domain K08M4_RS04030 PF00072 Response regulator receiver domain K08M4_RS04035 PF01739 CheR methyltransferase, SAM binding domain K08M4_RS04035 PF03705 CheR methyltransferase, all-alpha domain K08M4_RS04040 PF00460 Flagella basal body rod protein K08M4_RS04045 PF00460 Flagella basal body rod protein K08M4_RS04045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_RS04050 PF03963 Flagellar hook capping protein - N-terminal region K08M4_RS04050 PF13860 FlgD Ig-like domain K08M4_RS04050 PF13861 FlgD Tudor-like domain K08M4_RS04055 PF07559 Flagellar basal body protein FlaE K08M4_RS04055 PF00460 Flagella basal body rod protein K08M4_RS04055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_RS04060 PF00460 Flagella basal body rod protein K08M4_RS04060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_RS04065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_RS04065 PF00460 Flagella basal body rod protein K08M4_RS04070 PF02107 Flagellar L-ring protein K08M4_RS04075 PF02119 Flagellar P-ring protein K08M4_RS04080 PF10135 Rod binding protein K08M4_RS04080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K08M4_RS04085 PF07196 Flagellin hook IN motif K08M4_RS04085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_RS04095 PF00700 Bacterial flagellin C-terminal helical region K08M4_RS04095 PF07196 Flagellin hook IN motif K08M4_RS04095 PF00669 Bacterial flagellin N-terminal helical region K08M4_RS04105 PF00669 Bacterial flagellin N-terminal helical region K08M4_RS04105 PF00700 Bacterial flagellin C-terminal helical region K08M4_RS04105 PF07196 Flagellin hook IN motif K08M4_RS04110 PF00700 Bacterial flagellin C-terminal helical region K08M4_RS04110 PF07196 Flagellin hook IN motif K08M4_RS04110 PF00669 Bacterial flagellin N-terminal helical region K08M4_RS04115 PF03646 FlaG protein K08M4_RS04120 PF07195 Flagellar hook-associated protein 2 C-terminus K08M4_RS04120 PF02465 Flagellar hook-associated protein 2 N-terminus K08M4_RS04120 PF07196 Flagellin hook IN motif K08M4_RS04130 PF02561 Flagellar protein FliS K08M4_RS04135 PF00158 Sigma-54 interaction domain K08M4_RS04135 PF02954 Bacterial regulatory protein, Fis family K08M4_RS04135 PF06490 Flagellar regulatory protein FleQ K08M4_RS04140 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS04140 PF13188 PAS domain K08M4_RS04145 PF00158 Sigma-54 interaction domain K08M4_RS04145 PF02954 Bacterial regulatory protein, Fis family K08M4_RS04145 PF00072 Response regulator receiver domain K08M4_RS04150 PF02049 Flagellar hook-basal body complex protein FliE K08M4_RS04155 PF08345 Flagellar M-ring protein C-terminal K08M4_RS04155 PF01514 Secretory protein of YscJ/FliF family K08M4_RS04160 PF14842 FliG N-terminal domain K08M4_RS04160 PF14841 FliG middle domain K08M4_RS04160 PF01706 FliG C-terminal domain K08M4_RS04170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_RS04170 PF18269 T3SS EscN ATPase C-terminal domain K08M4_RS04190 PF02154 Flagellar motor switch protein FliM K08M4_RS04190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K08M4_RS04195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K08M4_RS04200 PF04347 Flagellar biosynthesis protein, FliO K08M4_RS04205 PF00813 FliP family K08M4_RS04210 PF01313 Bacterial export proteins, family 3 K08M4_RS04215 PF01311 Bacterial export proteins, family 1 K08M4_RS04220 PF01312 FlhB HrpN YscU SpaS Family K08M4_RS04225 PF00771 FHIPEP family K08M4_RS04230 PF00448 SRP54-type protein, GTPase domain K08M4_RS04235 PF10609 NUBPL iron-transfer P-loop NTPase K08M4_RS04240 PF04542 Sigma-70 region 2 K08M4_RS04240 PF04539 Sigma-70 region 3 K08M4_RS04240 PF04545 Sigma-70, region 4 K08M4_RS04245 PF00072 Response regulator receiver domain K08M4_RS04250 PF04344 Chemotaxis phosphatase, CheZ K08M4_RS04255 PF00072 Response regulator receiver domain K08M4_RS04255 PF01584 CheW-like domain K08M4_RS04255 PF01627 Hpt domain K08M4_RS04255 PF02895 Signal transducing histidine kinase, homodimeric domain K08M4_RS04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS04260 PF01339 CheB methylesterase K08M4_RS04260 PF00072 Response regulator receiver domain K08M4_RS04265 PF13614 AAA domain K08M4_RS04275 PF01584 CheW-like domain K08M4_RS04285 PF00005 ABC transporter K08M4_RS04290 PF03379 CcmB protein K08M4_RS04295 PF01578 Cytochrome C assembly protein K08M4_RS04300 PF04995 Heme exporter protein D (CcmD) K08M4_RS04305 PF03100 CcmE K08M4_RS04310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K08M4_RS04310 PF01578 Cytochrome C assembly protein K08M4_RS04315 PF08534 Redoxin K08M4_RS04320 PF03918 Cytochrome C biogenesis protein K08M4_RS04325 PF03918 Cytochrome C biogenesis protein K08M4_RS04330 PF04333 MlaA lipoprotein K08M4_RS04335 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M4_RS04340 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M4_RS04350 PF08281 Sigma-70, region 4 K08M4_RS04350 PF04542 Sigma-70 region 2 K08M4_RS04355 PF02803 Thiolase, C-terminal domain K08M4_RS04355 PF00108 Thiolase, N-terminal domain K08M4_RS04360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K08M4_RS04360 PF00378 Enoyl-CoA hydratase/isomerase K08M4_RS04360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K08M4_RS04365 PF05193 Peptidase M16 inactive domain K08M4_RS04365 PF00675 Insulinase (Peptidase family M16) K08M4_RS04365 PF16187 Middle or third domain of peptidase_M16 K08M4_RS04370 PF00300 Histidine phosphatase superfamily (branch 1) K08M4_RS04375 PF01713 Smr domain K08M4_RS04380 PF05175 Methyltransferase small domain K08M4_RS04385 PF01810 LysE type translocator K08M4_RS04390 PF02696 Uncharacterized ACR, YdiU/UPF0061 family K08M4_RS04395 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS04395 PF00072 Response regulator receiver domain K08M4_RS04400 PF00672 HAMP domain K08M4_RS04400 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS04405 PF01547 Bacterial extracellular solute-binding protein K08M4_RS04410 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS04415 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS04420 PF00005 ABC transporter K08M4_RS04420 PF17912 MalK OB fold domain K08M4_RS04420 PF03459 TOBE domain K08M4_RS04425 PF01926 50S ribosome-binding GTPase K08M4_RS04425 PF16360 GTP-binding GTPase Middle Region K08M4_RS04425 PF13167 GTP-binding GTPase N-terminal K08M4_RS04430 PF03776 Septum formation topological specificity factor MinE K08M4_RS04435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K08M4_RS04440 PF03775 Septum formation inhibitor MinC, C-terminal domain K08M4_RS04440 PF05209 Septum formation inhibitor MinC, N-terminal domain K08M4_RS04445 PF05166 YcgL domain K08M4_RS04450 PF13406 Transglycosylase SLT domain K08M4_RS04455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS04455 PF03466 LysR substrate binding domain K08M4_RS04460 PF01773 Na+ dependent nucleoside transporter N-terminus K08M4_RS04460 PF07670 Nucleoside recognition K08M4_RS04460 PF07662 Na+ dependent nucleoside transporter C-terminus K08M4_RS04470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K08M4_RS04470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K08M4_RS04480 PF13673 Acetyltransferase (GNAT) domain K08M4_RS04485 PF01264 Chorismate synthase K08M4_RS04500 PF03458 UPF0126 domain K08M4_RS04505 PF04315 Elongation factor P hydroxylase K08M4_RS04510 PF08891 YfcL protein K08M4_RS04515 PF03358 NADPH-dependent FMN reductase K08M4_RS04520 PF01266 FAD dependent oxidoreductase K08M4_RS04520 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K08M4_RS04525 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_RS04525 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_RS04535 PF11890 Domain of unknown function (DUF3410) K08M4_RS04535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_RS04535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_RS04540 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M4_RS04540 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M4_RS04550 PF01416 tRNA pseudouridine synthase K08M4_RS04560 PF01039 Carboxyl transferase domain K08M4_RS04560 PF17848 Acetyl-coA carboxylase zinc finger domain K08M4_RS04565 PF02875 Mur ligase family, glutamate ligase domain K08M4_RS04565 PF08245 Mur ligase middle domain K08M4_RS04570 PF05036 Sporulation related domain K08M4_RS04575 PF02674 Colicin V production protein K08M4_RS04580 PF00156 Phosphoribosyl transferase domain K08M4_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS04585 PF03466 LysR substrate binding domain K08M4_RS04590 PF00072 Response regulator receiver domain K08M4_RS04600 PF04304 Protein of unknown function (DUF454) K08M4_RS04605 PF00156 Phosphoribosyl transferase domain K08M4_RS04610 PF12170 DNA polymerase III tau subunit V interacting with alpha K08M4_RS04610 PF12169 DNA polymerase III subunits gamma and tau domain III K08M4_RS04610 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding K08M4_RS04615 PF02575 YbaB/EbfC DNA-binding family K08M4_RS04620 PF13662 Toprim domain K08M4_RS04620 PF02132 RecR protein K08M4_RS04625 PF00230 Major intrinsic protein K08M4_RS04630 PF03692 Putative zinc- or iron-chelating domain K08M4_RS04635 PF03692 Putative zinc- or iron-chelating domain K08M4_RS04640 PF00245 Alkaline phosphatase K08M4_RS04645 PF02028 BCCT, betaine/carnitine/choline family transporter K08M4_RS04660 PF13847 Methyltransferase domain K08M4_RS04665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS04665 PF08447 PAS fold K08M4_RS04665 PF13426 PAS domain K08M4_RS04670 PF01263 Aldose 1-epimerase K08M4_RS04675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_RS04675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_RS04680 PF01641 SelR domain K08M4_RS04690 PF07023 Protein of unknown function (DUF1315) K08M4_RS04695 PF00710 Asparaginase, N-terminal K08M4_RS04695 PF17763 Glutaminase/Asparaginase C-terminal domain K08M4_RS04700 PF01343 Peptidase family S49 K08M4_RS04705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_RS04705 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS04710 PF00881 Nitroreductase family K08M4_RS04715 PF01751 Toprim domain K08M4_RS04715 PF01131 DNA topoisomerase K08M4_RS04725 PF00106 short chain dehydrogenase K08M4_RS04730 PF00850 Histone deacetylase domain K08M4_RS04740 PF02082 Transcriptional regulator K08M4_RS04755 PF00884 Sulfatase K08M4_RS04755 PF11893 Domain of unknown function (DUF3413) K08M4_RS04760 PF07208 Protein of unknown function (DUF1414) K08M4_RS04765 PF04245 37-kD nucleoid-associated bacterial protein K08M4_RS04780 PF03553 Na+/H+ antiporter family K08M4_RS04785 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M4_RS04785 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M4_RS04790 PF00520 Ion transport protein K08M4_RS04790 PF00027 Cyclic nucleotide-binding domain K08M4_RS04795 PF01914 MarC family integral membrane protein K08M4_RS04800 PF00465 Iron-containing alcohol dehydrogenase K08M4_RS04800 PF00171 Aldehyde dehydrogenase family K08M4_RS04815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K08M4_RS04815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K08M4_RS04820 PF00462 Glutaredoxin K08M4_RS04830 PF13726 Na+-H+ antiporter family K08M4_RS04830 PF03553 Na+/H+ antiporter family K08M4_RS04835 PF00929 Exonuclease K08M4_RS04840 PF00691 OmpA family K08M4_RS04840 PF18393 MotY N-terminal domain K08M4_RS04845 PF10952 Protein of unknown function (DUF2753) K08M4_RS04850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_RS04855 PF10576 Iron-sulfur binding domain of endonuclease III K08M4_RS04855 PF00633 Helix-hairpin-helix motif K08M4_RS04855 PF00730 HhH-GPD superfamily base excision DNA repair protein K08M4_RS04860 PF02508 Rnf-Nqr subunit, membrane protein K08M4_RS04865 PF04205 FMN-binding domain K08M4_RS04870 PF03116 NQR2, RnfD, RnfE family K08M4_RS04875 PF10531 SLBB domain K08M4_RS04875 PF12838 4Fe-4S dicluster domain K08M4_RS04875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit K08M4_RS04875 PF13375 RnfC Barrel sandwich hybrid domain K08M4_RS04880 PF04060 Putative Fe-S cluster K08M4_RS04885 PF02508 Rnf-Nqr subunit, membrane protein K08M4_RS04895 PF04851 Type III restriction enzyme, res subunit K08M4_RS04895 PF02151 UvrB/uvrC motif K08M4_RS04895 PF00271 Helicase conserved C-terminal domain K08M4_RS04895 PF17757 UvrB interaction domain K08M4_RS04895 PF12344 Ultra-violet resistance protein B K08M4_RS04900 PF00158 Sigma-54 interaction domain K08M4_RS04900 PF00072 Response regulator receiver domain K08M4_RS04900 PF02954 Bacterial regulatory protein, Fis family K08M4_RS04905 PF01627 Hpt domain K08M4_RS04910 PF01933 Uncharacterised protein family UPF0052 K08M4_RS04915 PF06463 Molybdenum Cofactor Synthesis C K08M4_RS04915 PF04055 Radical SAM superfamily K08M4_RS04925 PF00994 Probable molybdopterin binding domain K08M4_RS04930 PF01967 MoaC family K08M4_RS04935 PF02597 ThiS family K08M4_RS04940 PF02391 MoaE protein K08M4_RS04945 PF13006 Insertion element 4 transposase N-terminal K08M4_RS04945 PF01609 Transposase DDE domain K08M4_RS04950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS04960 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS04960 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M4_RS04965 PF00005 ABC transporter K08M4_RS04965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS04970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS04970 PF00005 ABC transporter K08M4_RS04975 PF13409 Glutathione S-transferase, N-terminal domain K08M4_RS04980 PF00563 EAL domain K08M4_RS04980 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS04980 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS04985 PF07085 DRTGG domain K08M4_RS04985 PF01515 Phosphate acetyl/butaryl transferase K08M4_RS04990 PF00871 Acetokinase family K08M4_RS04995 PF04217 Protein of unknown function, DUF412 K08M4_RS05005 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS05010 PF01207 Dihydrouridine synthase (Dus) K08M4_RS05015 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS05015 PF00114 Pilin (bacterial filament) K08M4_RS05020 PF07517 SecA DEAD-like domain K08M4_RS05020 PF07516 SecA Wing and Scaffold domain K08M4_RS05020 PF02810 SEC-C motif K08M4_RS05020 PF01043 SecA preprotein cross-linking domain K08M4_RS05025 PF02600 Disulfide bond formation protein DsbB K08M4_RS05030 PF06450 Bacterial Na+/H+ antiporter B (NhaB) K08M4_RS05035 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS05035 PF07840 FadR C-terminal domain K08M4_RS05045 PF09334 tRNA synthetases class I (M) K08M4_RS05045 PF01588 Putative tRNA binding domain K08M4_RS05050 PF10609 NUBPL iron-transfer P-loop NTPase K08M4_RS05055 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_RS05060 PF05170 AsmA family K08M4_RS05065 PF12557 Cob(I)alamin adenosyltransferase N terminal K08M4_RS05065 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K08M4_RS05070 PF01451 Low molecular weight phosphotyrosine protein phosphatase K08M4_RS05075 PF00916 Sulfate permease family K08M4_RS05075 PF01740 STAS domain K08M4_RS05080 PF12111 Polyribonucleotide phosphorylase C terminal K08M4_RS05080 PF00575 S1 RNA binding domain K08M4_RS05080 PF10150 Ribonuclease E/G family K08M4_RS05085 PF00849 RNA pseudouridylate synthase K08M4_RS05085 PF01479 S4 domain K08M4_RS05090 PF02545 Maf-like protein K08M4_RS05095 PF02620 Large ribosomal RNA subunit accumulation protein YceD K08M4_RS05100 PF01783 Ribosomal L32p protein family K08M4_RS05105 PF02504 Fatty acid synthesis protein K08M4_RS05110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K08M4_RS05110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K08M4_RS05115 PF00698 Acyl transferase domain K08M4_RS05125 PF00550 Phosphopantetheine attachment site K08M4_RS05130 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_RS05130 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_RS05135 PF01063 Amino-transferase class IV K08M4_RS05140 PF02618 YceG-like family K08M4_RS05145 PF02223 Thymidylate kinase K08M4_RS05150 PF09115 DNA polymerase III, delta subunit, C terminal K08M4_RS05155 PF01026 TatD related DNase K08M4_RS05160 PF02378 Phosphotransferase system, EIIC K08M4_RS05160 PF00367 phosphotransferase system, EIIB K08M4_RS05175 PF00209 Sodium:neurotransmitter symporter family K08M4_RS05185 PF01734 Patatin-like phospholipase K08M4_RS05190 PF02887 Pyruvate kinase, alpha/beta domain K08M4_RS05190 PF00224 Pyruvate kinase, barrel domain K08M4_RS05195 PF00480 ROK family K08M4_RS05200 PF01584 CheW-like domain K08M4_RS05200 PF00072 Response regulator receiver domain K08M4_RS05205 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M4_RS05205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M4_RS05205 PF14579 Helix-hairpin-helix motif K08M4_RS05205 PF02811 PHP domain K08M4_RS05205 PF01336 OB-fold nucleic acid binding domain K08M4_RS05215 PF00154 recA bacterial DNA recombination protein K08M4_RS05220 PF00106 short chain dehydrogenase K08M4_RS05225 PF08496 Peptidase family S49 N-terminal K08M4_RS05225 PF01343 Peptidase family S49 K08M4_RS05230 PF04293 SpoVR like protein K08M4_RS05235 PF04285 Protein of unknown function (DUF444) K08M4_RS05240 PF08298 PrkA AAA domain K08M4_RS05240 PF06798 PrkA serine protein kinase C-terminal domain K08M4_RS05245 PF03887 YfbU domain K08M4_RS05250 PF04055 Radical SAM superfamily K08M4_RS05260 PF01228 Glycine radical K08M4_RS05260 PF02901 Pyruvate formate lyase-like K08M4_RS05270 PF00005 ABC transporter K08M4_RS05275 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS05285 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS05295 PF03372 Endonuclease/Exonuclease/phosphatase family K08M4_RS05300 PF00326 Prolyl oligopeptidase family K08M4_RS05300 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M4_RS05305 PF07690 Major Facilitator Superfamily K08M4_RS05310 PF00672 HAMP domain K08M4_RS05310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS05315 PF08007 Cupin superfamily protein K08M4_RS05320 PF10689 Protein of unknown function (DUF2496) K08M4_RS05330 PF01925 Sulfite exporter TauE/SafE K08M4_RS05335 PF13307 Helicase C-terminal domain K08M4_RS05335 PF06733 DEAD_2 K08M4_RS05340 PF13609 Gram-negative porin K08M4_RS05345 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K08M4_RS05350 PF00849 RNA pseudouridylate synthase K08M4_RS05355 PF03971 Monomeric isocitrate dehydrogenase K08M4_RS05360 PF00313 'Cold-shock' DNA-binding domain K08M4_RS05365 PF02617 ATP-dependent Clp protease adaptor protein ClpS K08M4_RS05370 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_RS05370 PF17871 AAA lid domain K08M4_RS05370 PF07724 AAA domain (Cdc48 subfamily) K08M4_RS05370 PF10431 C-terminal, D2-small domain, of ClpB protein K08M4_RS05370 PF02861 Clp amino terminal domain, pathogenicity island component K08M4_RS05375 PF01176 Translation initiation factor 1A / IF-1 K08M4_RS05380 PF04376 Arginine-tRNA-protein transferase, N terminus K08M4_RS05380 PF04377 Arginine-tRNA-protein transferase, C terminus K08M4_RS05385 PF03588 Leucyl/phenylalanyl-tRNA protein transferase K08M4_RS05395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K08M4_RS05400 PF10692 Protein of unknown function (DUF2498) K08M4_RS05405 PF01131 DNA topoisomerase K08M4_RS05405 PF01396 Topoisomerase DNA binding C4 zinc finger K08M4_RS05405 PF01751 Toprim domain K08M4_RS05405 PF08272 Topoisomerase I zinc-ribbon-like K08M4_RS05410 PF00483 Nucleotidyl transferase K08M4_RS05415 PF00534 Glycosyl transferases group 1 K08M4_RS05415 PF08323 Starch synthase catalytic domain K08M4_RS05435 PF04993 TfoX N-terminal domain K08M4_RS05435 PF04994 TfoX C-terminal domain K08M4_RS05440 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS05445 PF02613 Nitrate reductase delta subunit K08M4_RS05450 PF00072 Response regulator receiver domain K08M4_RS05450 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS05455 PF02698 DUF218 domain K08M4_RS05460 PF13847 Methyltransferase domain K08M4_RS05465 PF17193 MukF C-terminal domain K08M4_RS05465 PF17192 MukF middle domain K08M4_RS05465 PF03882 MukF winged-helix domain K08M4_RS05470 PF04288 MukE-like family K08M4_RS05475 PF04310 MukB N-terminal K08M4_RS05475 PF16330 MukB hinge domain K08M4_RS05480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS05480 PF02743 Cache domain K08M4_RS05480 PF00672 HAMP domain K08M4_RS05495 PF18030 RimK PreATP-grasp domain K08M4_RS05495 PF08443 RimK-like ATP-grasp domain K08M4_RS05500 PF08003 Protein of unknown function (DUF1698) K08M4_RS05505 PF13649 Methyltransferase domain K08M4_RS05510 PF01904 Protein of unknown function DUF72 K08M4_RS05515 PF01336 OB-fold nucleic acid binding domain K08M4_RS05515 PF02938 GAD domain K08M4_RS05515 PF00152 tRNA synthetases class II (D, K and N) K08M4_RS05520 PF02075 Crossover junction endodeoxyribonuclease RuvC K08M4_RS05525 PF07499 RuvA, C-terminal domain K08M4_RS05525 PF01330 RuvA N terminal domain K08M4_RS05530 PF05496 Holliday junction DNA helicase RuvB P-loop domain K08M4_RS05530 PF05491 RuvB C-terminal winged helix domain K08M4_RS05530 PF17864 RuvB AAA lid domain K08M4_RS05535 PF01654 Cytochrome bd terminal oxidase subunit I K08M4_RS05540 PF02322 Cytochrome bd terminal oxidase subunit II K08M4_RS05545 PF08173 Membrane bound YbgT-like protein K08M4_RS05555 PF03061 Thioesterase superfamily K08M4_RS05560 PF01618 MotA/TolQ/ExbB proton channel family K08M4_RS05565 PF02472 Biopolymer transport protein ExbD/TolR K08M4_RS05575 PF07676 WD40-like Beta Propeller Repeat K08M4_RS05575 PF04052 TolB amino-terminal domain K08M4_RS05580 PF00691 OmpA family K08M4_RS05585 PF16331 TolA binding protein trimerisation K08M4_RS05585 PF13174 Tetratricopeptide repeat K08M4_RS05590 PF02445 Quinolinate synthetase A protein K08M4_RS05595 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS05600 PF08021 Siderophore-interacting FAD-binding domain K08M4_RS05600 PF04954 Siderophore-interacting protein K08M4_RS05605 PF01497 Periplasmic binding protein K08M4_RS05610 PF01032 FecCD transport family K08M4_RS05615 PF01032 FecCD transport family K08M4_RS05620 PF00005 ABC transporter K08M4_RS05635 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS05635 PF00072 Response regulator receiver domain K08M4_RS05635 PF09308 LuxQ, periplasmic K08M4_RS05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS05640 PF06610 L-alanine exporter K08M4_RS05650 PF03466 LysR substrate binding domain K08M4_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS05655 PF01266 FAD dependent oxidoreductase K08M4_RS05675 PF00072 Response regulator receiver domain K08M4_RS05675 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS05680 PF00535 Glycosyl transferase family 2 K08M4_RS05685 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase K08M4_RS05695 PF04055 Radical SAM superfamily K08M4_RS05695 PF11842 Domain of unknown function (DUF3362) K08M4_RS05695 PF08497 Radical SAM N-terminal K08M4_RS05715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS05715 PF03466 LysR substrate binding domain K08M4_RS05720 PF01717 Cobalamin-independent synthase, Catalytic domain K08M4_RS05720 PF08267 Cobalamin-independent synthase, N-terminal domain K08M4_RS05730 PF03795 YCII-related domain K08M4_RS05735 PF03061 Thioesterase superfamily K08M4_RS05740 PF04279 Intracellular septation protein A K08M4_RS05750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS05750 PF03466 LysR substrate binding domain K08M4_RS05760 PF00155 Aminotransferase class I and II K08M4_RS05765 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS05770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K08M4_RS05770 PF00072 Response regulator receiver domain K08M4_RS05770 PF01627 Hpt domain K08M4_RS05770 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS05770 PF00672 HAMP domain K08M4_RS05775 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS05775 PF01590 GAF domain K08M4_RS05775 PF00563 EAL domain K08M4_RS05775 PF00360 Phytochrome region K08M4_RS05780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS05780 PF00672 HAMP domain K08M4_RS05800 PF01066 CDP-alcohol phosphatidyltransferase K08M4_RS05805 PF00005 ABC transporter K08M4_RS05810 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS05815 PF13416 Bacterial extracellular solute-binding protein K08M4_RS05825 PF06945 Protein of unknown function (DUF1289) K08M4_RS05830 PF01910 Thiamine-binding protein K08M4_RS05840 PF00270 DEAD/DEAH box helicase K08M4_RS05840 PF00271 Helicase conserved C-terminal domain K08M4_RS05845 PF01810 LysE type translocator K08M4_RS05855 PF18027 Cytosolic carboxypeptidase N-terminal domain K08M4_RS05855 PF00246 Zinc carboxypeptidase K08M4_RS05875 PF00005 ABC transporter K08M4_RS05875 PF00571 CBS domain K08M4_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS05885 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K08M4_RS05895 PF03466 LysR substrate binding domain K08M4_RS05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS05905 PF00664 ABC transporter transmembrane region K08M4_RS05905 PF00005 ABC transporter K08M4_RS05910 PF00005 ABC transporter K08M4_RS05910 PF00664 ABC transporter transmembrane region K08M4_RS05915 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS05930 PF00266 Aminotransferase class-V K08M4_RS05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS05940 PF03466 LysR substrate binding domain K08M4_RS05945 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS05955 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS05955 PF00072 Response regulator receiver domain K08M4_RS05960 PF00939 Sodium:sulfate symporter transmembrane region K08M4_RS05965 PF02698 DUF218 domain K08M4_RS05970 PF03949 Malic enzyme, NAD binding domain K08M4_RS05970 PF00390 Malic enzyme, N-terminal domain K08M4_RS05975 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K08M4_RS05975 PF00271 Helicase conserved C-terminal domain K08M4_RS05975 PF04408 Helicase associated domain (HA2) K08M4_RS05975 PF11898 Domain of unknown function (DUF3418) K08M4_RS05975 PF00270 DEAD/DEAH box helicase K08M4_RS05985 PF01259 SAICAR synthetase K08M4_RS06005 PF00691 OmpA family K08M4_RS06020 PF02913 FAD linked oxidases, C-terminal domain K08M4_RS06020 PF13183 4Fe-4S dicluster domain K08M4_RS06020 PF01565 FAD binding domain K08M4_RS06025 PF04191 Phospholipid methyltransferase K08M4_RS06040 PF00221 Aromatic amino acid lyase K08M4_RS06045 PF17392 Urocanase C-terminal domain K08M4_RS06045 PF17391 Urocanase N-terminal domain K08M4_RS06045 PF01175 Urocanase Rossmann-like domain K08M4_RS06050 PF00491 Arginase family K08M4_RS06055 PF01979 Amidohydrolase family K08M4_RS06060 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS06060 PF07702 UTRA domain K08M4_RS06065 PF07070 SpoOM protein K08M4_RS06105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M4_RS06105 PF02824 TGS domain K08M4_RS06105 PF03129 Anticodon binding domain K08M4_RS06105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M4_RS06110 PF00707 Translation initiation factor IF-3, C-terminal domain K08M4_RS06110 PF05198 Translation initiation factor IF-3, N-terminal domain K08M4_RS06115 PF01632 Ribosomal protein L35 K08M4_RS06120 PF00453 Ribosomal protein L20 K08M4_RS06125 PF04266 ASCH domain K08M4_RS06140 PF00005 ABC transporter K08M4_RS06140 PF16326 ABC transporter C-terminal domain K08M4_RS06140 PF12848 ABC transporter K08M4_RS06150 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS06150 PF17932 Tetracyclin repressor-like, C-terminal domain K08M4_RS06155 PF00171 Aldehyde dehydrogenase family K08M4_RS06160 PF17944 Arginine decarboxylase C-terminal helical extension K08M4_RS06160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K08M4_RS06160 PF17810 Arginine decarboxylase helical bundle domain K08M4_RS06165 PF00491 Arginase family K08M4_RS06175 PF00474 Sodium:solute symporter family K08M4_RS06180 PF01081 KDPG and KHG aldolase K08M4_RS06185 PF00294 pfkB family carbohydrate kinase K08M4_RS06190 PF07883 Cupin domain K08M4_RS06195 PF07940 Heparinase II/III-like protein K08M4_RS06195 PF05426 Alginate lyase K08M4_RS06200 PF07940 Heparinase II/III-like protein K08M4_RS06200 PF05426 Alginate lyase K08M4_RS06210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M4_RS06210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_RS06220 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS06220 PF07729 FCD domain K08M4_RS06225 PF07729 FCD domain K08M4_RS06225 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS06230 PF00571 CBS domain K08M4_RS06235 PF11490 DNA polymerase III polC-type N-terminus II K08M4_RS06235 PF14579 Helix-hairpin-helix motif K08M4_RS06235 PF14480 DNA polymerase III polC-type N-terminus I K08M4_RS06235 PF01336 OB-fold nucleic acid binding domain K08M4_RS06235 PF00929 Exonuclease K08M4_RS06235 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M4_RS06235 PF02811 PHP domain K08M4_RS06235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M4_RS06245 PF00474 Sodium:solute symporter family K08M4_RS06250 PF01625 Peptide methionine sulfoxide reductase K08M4_RS06250 PF01641 SelR domain K08M4_RS06265 PF01212 Beta-eliminating lyase K08M4_RS06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS06270 PF03466 LysR substrate binding domain K08M4_RS06305 PF00939 Sodium:sulfate symporter transmembrane region K08M4_RS06310 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS06310 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS06315 PF00072 Response regulator receiver domain K08M4_RS06315 PF00158 Sigma-54 interaction domain K08M4_RS06315 PF02954 Bacterial regulatory protein, Fis family K08M4_RS06330 PF01965 DJ-1/PfpI family K08M4_RS06340 PF08267 Cobalamin-independent synthase, N-terminal domain K08M4_RS06340 PF01717 Cobalamin-independent synthase, Catalytic domain K08M4_RS06350 PF01925 Sulfite exporter TauE/SafE K08M4_RS06360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K08M4_RS06365 PF01810 LysE type translocator K08M4_RS06370 PF01235 Sodium:alanine symporter family K08M4_RS06385 PF01235 Sodium:alanine symporter family K08M4_RS06390 PF00216 Bacterial DNA-binding protein K08M4_RS06410 PF13280 WYL domain K08M4_RS06410 PF08279 HTH domain K08M4_RS06415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS06415 PF02743 Cache domain K08M4_RS06415 PF00672 HAMP domain K08M4_RS06425 PF03466 LysR substrate binding domain K08M4_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS06435 PF02668 Taurine catabolism dioxygenase TauD, TfdA family K08M4_RS06440 PF00072 Response regulator receiver domain K08M4_RS06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS06445 PF00155 Aminotransferase class I and II K08M4_RS06450 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS06450 PF00155 Aminotransferase class I and II K08M4_RS06460 PF07683 Cobalamin synthesis protein cobW C-terminal domain K08M4_RS06460 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M4_RS06465 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS06470 PF00216 Bacterial DNA-binding protein K08M4_RS06480 PF05724 Thiopurine S-methyltransferase (TPMT) K08M4_RS06485 PF02222 ATP-grasp domain K08M4_RS06490 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_RS06490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_RS06495 PF04172 LrgB-like family K08M4_RS06500 PF03788 LrgA family K08M4_RS06505 PF00929 Exonuclease K08M4_RS06505 PF08411 Exonuclease C-terminal K08M4_RS06510 PF04116 Fatty acid hydroxylase superfamily K08M4_RS06525 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) K08M4_RS06535 PF00375 Sodium:dicarboxylate symporter family K08M4_RS06540 PF13460 NAD(P)H-binding K08M4_RS06545 PF01613 Flavin reductase like domain K08M4_RS06550 PF02277 Phosphoribosyltransferase K08M4_RS06555 PF02654 Cobalamin-5-phosphate synthase K08M4_RS06560 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase K08M4_RS06575 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M4_RS06580 PF01032 FecCD transport family K08M4_RS06585 PF00005 ABC transporter K08M4_RS06610 PF03466 LysR substrate binding domain K08M4_RS06610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS06630 PF00583 Acetyltransferase (GNAT) family K08M4_RS06640 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS06650 PF07690 Major Facilitator Superfamily K08M4_RS06655 PF03466 LysR substrate binding domain K08M4_RS06655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS06665 PF01863 Protein of unknown function DUF45 K08M4_RS06670 PF05971 RNA methyltransferase K08M4_RS06680 PF04204 Homoserine O-succinyltransferase K08M4_RS06695 PF01546 Peptidase family M20/M25/M40 K08M4_RS06695 PF07687 Peptidase dimerisation domain K08M4_RS06720 PF00589 Phage integrase family K08M4_RS06720 PF13356 Arm DNA-binding domain K08M4_RS06760 PF04002 RadC-like JAB domain K08M4_RS06765 PF00075 RNase H K08M4_RS06820 PF04851 Type III restriction enzyme, res subunit K08M4_RS06820 PF08463 EcoEI R protein C-terminal K08M4_RS06820 PF00271 Helicase conserved C-terminal domain K08M4_RS06820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) K08M4_RS06825 PF02384 N-6 DNA Methylase K08M4_RS06830 PF01420 Type I restriction modification DNA specificity domain K08M4_RS06855 PF12102 Domain of unknown function (DUF3578) K08M4_RS06855 PF07728 AAA domain (dynein-related subfamily) K08M4_RS06870 PF00709 Adenylosuccinate synthetase K08M4_RS06875 PF03466 LysR substrate binding domain K08M4_RS06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS06890 PF12729 Four helix bundle sensory module for signal transduction K08M4_RS06890 PF00672 HAMP domain K08M4_RS06890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS06900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS06900 PF03466 LysR substrate binding domain K08M4_RS06905 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS06905 PF00593 TonB dependent receptor K08M4_RS06915 PF00583 Acetyltransferase (GNAT) family K08M4_RS06920 PF01810 LysE type translocator K08M4_RS06930 PF12320 Type 5 capsule protein repressor C-terminal domain K08M4_RS06930 PF00149 Calcineurin-like phosphoesterase K08M4_RS06935 PF13476 AAA domain K08M4_RS06955 PF04244 Deoxyribodipyrimidine photo-lyase-related protein K08M4_RS06965 PF00582 Universal stress protein family K08M4_RS06985 PF07690 Major Facilitator Superfamily K08M4_RS07000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_RS07000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_RS07020 PF00293 NUDIX domain K08M4_RS07035 PF01479 S4 domain K08M4_RS07035 PF00849 RNA pseudouridylate synthase K08M4_RS07070 PF03737 Aldolase/RraA K08M4_RS07090 PF00293 NUDIX domain K08M4_RS07110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_RS07130 PF07517 SecA DEAD-like domain K08M4_RS07130 PF01043 SecA preprotein cross-linking domain K08M4_RS07130 PF07516 SecA Wing and Scaffold domain K08M4_RS07130 PF02810 SEC-C motif K08M4_RS07145 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS07170 PF01136 Peptidase family U32 K08M4_RS07170 PF12392 Collagenase K08M4_RS07180 PF00005 ABC transporter K08M4_RS07180 PF00664 ABC transporter transmembrane region K08M4_RS07185 PF00005 ABC transporter K08M4_RS07190 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS07195 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07200 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07205 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS07205 PF00589 Phage integrase family K08M4_RS07210 PF14319 Transposase zinc-binding domain K08M4_RS07210 PF04986 Putative transposase K08M4_RS07280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family K08M4_RS07290 PF02321 Outer membrane efflux protein K08M4_RS07295 PF00873 AcrB/AcrD/AcrF family K08M4_RS07305 PF03466 LysR substrate binding domain K08M4_RS07305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS07315 PF02397 Bacterial sugar transferase K08M4_RS07325 PF00534 Glycosyl transferases group 1 K08M4_RS07325 PF13439 Glycosyltransferase Family 4 K08M4_RS07350 PF13439 Glycosyltransferase Family 4 K08M4_RS07350 PF00534 Glycosyl transferases group 1 K08M4_RS07355 PF02954 Bacterial regulatory protein, Fis family K08M4_RS07355 PF00158 Sigma-54 interaction domain K08M4_RS07355 PF00072 Response regulator receiver domain K08M4_RS07365 PF00571 CBS domain K08M4_RS07365 PF00005 ABC transporter K08M4_RS07370 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07390 PF01389 OmpA-like transmembrane domain K08M4_RS07390 PF00691 OmpA family K08M4_RS07400 PF14743 DNA ligase OB-like domain K08M4_RS07400 PF01068 ATP dependent DNA ligase domain K08M4_RS07405 PF01554 MatE K08M4_RS07410 PF00677 Lumazine binding domain K08M4_RS07420 PF03881 Fructosamine kinase K08M4_RS07430 PF00877 NlpC/P60 family K08M4_RS07435 PF12729 Four helix bundle sensory module for signal transduction K08M4_RS07435 PF00672 HAMP domain K08M4_RS07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS07445 PF03942 DTW domain K08M4_RS07450 PF00480 ROK family K08M4_RS07460 PF03453 MoeA N-terminal region (domain I and II) K08M4_RS07460 PF00994 Probable molybdopterin binding domain K08M4_RS07460 PF03454 MoeA C-terminal region (domain IV) K08M4_RS07465 PF12804 MobA-like NTP transferase domain K08M4_RS07470 PF08402 TOBE domain K08M4_RS07470 PF00005 ABC transporter K08M4_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07480 PF12849 PBP superfamily domain K08M4_RS07485 PF02954 Bacterial regulatory protein, Fis family K08M4_RS07485 PF00158 Sigma-54 interaction domain K08M4_RS07485 PF00072 Response regulator receiver domain K08M4_RS07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS07490 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS07505 PF12848 ABC transporter K08M4_RS07505 PF00005 ABC transporter K08M4_RS07510 PF02634 FdhD/NarQ family K08M4_RS07530 PF02613 Nitrate reductase delta subunit K08M4_RS07540 PF01568 Molydopterin dinucleotide binding domain K08M4_RS07540 PF00384 Molybdopterin oxidoreductase K08M4_RS07540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M4_RS07545 PF13247 4Fe-4S dicluster domain K08M4_RS07560 PF00909 Ammonium Transporter Family K08M4_RS07565 PF02146 Sir2 family K08M4_RS07570 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS07575 PF13416 Bacterial extracellular solute-binding protein K08M4_RS07580 PF13416 Bacterial extracellular solute-binding protein K08M4_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07595 PF00005 ABC transporter K08M4_RS07595 PF08402 TOBE domain K08M4_RS07615 PF01171 PP-loop family K08M4_RS07620 PF00582 Universal stress protein family K08M4_RS07625 PF00027 Cyclic nucleotide-binding domain K08M4_RS07625 PF13545 Crp-like helix-turn-helix domain K08M4_RS07640 PF00403 Heavy-metal-associated domain K08M4_RS07650 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP K08M4_RS07650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M4_RS07665 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M4_RS07680 PF00072 Response regulator receiver domain K08M4_RS07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS07680 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS07680 PF09308 LuxQ, periplasmic K08M4_RS07735 PF13358 DDE superfamily endonuclease K08M4_RS07760 PF17414 MatP C-terminal ribbon-helix-helix domain K08M4_RS07760 PF06303 MatP N-terminal domain K08M4_RS07765 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M4_RS07765 PF13654 AAA domain K08M4_RS07770 PF07977 FabA-like domain K08M4_RS07775 PF04957 Ribosome modulation factor K08M4_RS07785 PF16326 ABC transporter C-terminal domain K08M4_RS07785 PF00005 ABC transporter K08M4_RS07785 PF12848 ABC transporter K08M4_RS07795 PF01170 Putative RNA methylase family UPF0020 K08M4_RS07795 PF02926 THUMP domain K08M4_RS07795 PF10672 S-adenosylmethionine-dependent methyltransferase K08M4_RS07800 PF07126 Cell-division protein ZapC K08M4_RS07805 PF01180 Dihydroorotate dehydrogenase K08M4_RS07810 PF05088 Bacterial NAD-glutamate dehydrogenase K08M4_RS07820 PF17432 Domain of unknown function (DUF3458_C) ARM repeats K08M4_RS07820 PF01433 Peptidase family M1 domain K08M4_RS07820 PF11940 Domain of unknown function (DUF3458) Ig-like fold K08M4_RS07830 PF00595 PDZ domain K08M4_RS07830 PF17804 Tail specific protease N-terminal domain K08M4_RS07830 PF03572 Peptidase family S41 K08M4_RS07830 PF11818 C-terminal domain of tail specific protease (DUF3340) K08M4_RS07835 PF17516 ProQ C-terminal domain K08M4_RS07835 PF04352 ProQ/FINO family K08M4_RS07840 PF13185 GAF domain K08M4_RS07845 PF00005 ABC transporter K08M4_RS07845 PF00664 ABC transporter transmembrane region K08M4_RS07850 PF04403 Paraquat-inducible protein A K08M4_RS07855 PF02470 MlaD protein K08M4_RS07860 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF K08M4_RS07860 PF01189 16S rRNA methyltransferase RsmB/F K08M4_RS07860 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF K08M4_RS07865 PF13509 S1 domain K08M4_RS07865 PF17783 CvfB-like winged helix domain K08M4_RS07880 PF00391 PEP-utilising enzyme, mobile domain K08M4_RS07880 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_RS07880 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K08M4_RS07885 PF00793 DAHP synthetase I family K08M4_RS07890 PF04461 Protein of unknown function (DUF520) K08M4_RS07895 PF14824 Sirohaem biosynthesis protein central K08M4_RS07895 PF10414 Sirohaem synthase dimerisation region K08M4_RS07895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_RS07900 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS07905 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07910 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS07915 PF00005 ABC transporter K08M4_RS07920 PF01027 Inhibitor of apoptosis-promoting Bax1 K08M4_RS07925 PF04358 DsrC like protein K08M4_RS07930 PF00708 Acylphosphatase K08M4_RS07935 PF12729 Four helix bundle sensory module for signal transduction K08M4_RS07935 PF00672 HAMP domain K08M4_RS07935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS07940 PF17785 PUA-like domain K08M4_RS07940 PF10672 S-adenosylmethionine-dependent methyltransferase K08M4_RS07965 PF17151 Periplasmic sensor domain K08M4_RS07965 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS07970 PF06508 Queuosine biosynthesis protein QueC K08M4_RS07975 PF04055 Radical SAM superfamily K08M4_RS08005 PF00501 AMP-binding enzyme K08M4_RS08005 PF16177 Acetyl-coenzyme A synthetase N-terminus K08M4_RS08005 PF13193 AMP-binding enzyme C-terminal domain K08M4_RS08010 PF04303 PrpF protein K08M4_RS08015 PF00330 Aconitase family (aconitate hydratase) K08M4_RS08015 PF00694 Aconitase C-terminal domain K08M4_RS08020 PF00285 Citrate synthase, C-terminal domain K08M4_RS08055 PF01970 Tripartite tricarboxylate transporter TctA family K08M4_RS08070 PF09905 DNA-binding protein VF530 K08M4_RS08075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_RS08075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K08M4_RS08080 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K08M4_RS08085 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain K08M4_RS08085 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain K08M4_RS08090 PF12431 Transcriptional regulator K08M4_RS08090 PF00072 Response regulator receiver domain K08M4_RS08095 PF17203 Single cache domain 3 K08M4_RS08095 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain K08M4_RS08095 PF00989 PAS fold K08M4_RS08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS08110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS08140 PF02001 Protein of unknown function DUF134 K08M4_RS08210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M4_RS08215 PF02152 Dihydroneopterin aldolase K08M4_RS08220 PF01227 GTP cyclohydrolase I K08M4_RS08235 PF01734 Patatin-like phospholipase K08M4_RS08275 PF01588 Putative tRNA binding domain K08M4_RS08275 PF03147 Ferredoxin-fold anticodon binding domain K08M4_RS08275 PF03484 tRNA synthetase B5 domain K08M4_RS08275 PF03483 B3/4 domain K08M4_RS08275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain K08M4_RS08280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain K08M4_RS08280 PF01409 tRNA synthetases class II core domain (F) K08M4_RS08285 PF00072 Response regulator receiver domain K08M4_RS08285 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS08330 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K08M4_RS08330 PF11898 Domain of unknown function (DUF3418) K08M4_RS08330 PF00270 DEAD/DEAH box helicase K08M4_RS08330 PF04408 Helicase associated domain (HA2) K08M4_RS08330 PF00271 Helicase conserved C-terminal domain K08M4_RS08335 PF14310 Fibronectin type III-like domain K08M4_RS08335 PF01915 Glycosyl hydrolase family 3 C-terminal domain K08M4_RS08335 PF00933 Glycosyl hydrolase family 3 N terminal domain K08M4_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS08350 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS08355 PF13416 Bacterial extracellular solute-binding protein K08M4_RS08360 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS08365 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain K08M4_RS08370 PF00005 ABC transporter K08M4_RS08370 PF17912 MalK OB fold domain K08M4_RS08370 PF03459 TOBE domain K08M4_RS08410 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS08410 PF08448 PAS fold K08M4_RS08420 PF00012 Hsp70 protein K08M4_RS08425 PF00012 Hsp70 protein K08M4_RS08440 PF13302 Acetyltransferase (GNAT) domain K08M4_RS08445 PF00158 Sigma-54 interaction domain K08M4_RS08445 PF18024 Helix-turn-helix domain K08M4_RS08450 PF05128 Domain of unknown function (DUF697) K08M4_RS08455 PF04317 YcjX-like family, DUF463 K08M4_RS08470 PF04715 Anthranilate synthase component I, N terminal region K08M4_RS08470 PF00425 chorismate binding enzyme K08M4_RS08480 PF00072 Response regulator receiver domain K08M4_RS08480 PF09308 LuxQ, periplasmic K08M4_RS08480 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS08490 PF00293 NUDIX domain K08M4_RS08495 PF03222 Tryptophan/tyrosine permease family K08M4_RS08500 PF03313 Serine dehydratase alpha chain K08M4_RS08500 PF03315 Serine dehydratase beta chain K08M4_RS08505 PF03222 Tryptophan/tyrosine permease family K08M4_RS08510 PF01242 6-pyruvoyl tetrahydropterin synthase K08M4_RS08515 PF00672 HAMP domain K08M4_RS08515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS08515 PF02743 Cache domain K08M4_RS08520 PF00916 Sulfate permease family K08M4_RS08520 PF01740 STAS domain K08M4_RS08525 PF00152 tRNA synthetases class II (D, K and N) K08M4_RS08525 PF01336 OB-fold nucleic acid binding domain K08M4_RS08540 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS08540 PF00155 Aminotransferase class I and II K08M4_RS08550 PF01966 HD domain K08M4_RS08550 PF00672 HAMP domain K08M4_RS08570 PF00155 Aminotransferase class I and II K08M4_RS08590 PF03475 3-alpha domain K08M4_RS08590 PF03473 MOSC domain K08M4_RS08595 PF00266 Aminotransferase class-V K08M4_RS08605 PF00989 PAS fold K08M4_RS08605 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS08610 PF00158 Sigma-54 interaction domain K08M4_RS08610 PF02954 Bacterial regulatory protein, Fis family K08M4_RS08610 PF00072 Response regulator receiver domain K08M4_RS08620 PF04993 TfoX N-terminal domain K08M4_RS08620 PF04994 TfoX C-terminal domain K08M4_RS08635 PF03956 Lysine exporter LysO K08M4_RS08645 PF00282 Pyridoxal-dependent decarboxylase conserved domain K08M4_RS08650 PF01380 SIS domain K08M4_RS08650 PF01418 Helix-turn-helix domain, rpiR family K08M4_RS08655 PF00465 Iron-containing alcohol dehydrogenase K08M4_RS08660 PF00462 Glutaredoxin K08M4_RS08665 PF02080 TrkA-C domain K08M4_RS08665 PF06826 Predicted Permease Membrane Region K08M4_RS08670 PF07055 Enoyl reductase FAD binding domain K08M4_RS08670 PF12241 Trans-2-enoyl-CoA reductase catalytic region K08M4_RS08670 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K08M4_RS08675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M4_RS08675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M4_RS08675 PF09317 Domain of unknown function (DUF1974) K08M4_RS08675 PF02770 Acyl-CoA dehydrogenase, middle domain K08M4_RS08680 PF16295 Tetracyclin repressor-like, C-terminal domain K08M4_RS08680 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS08700 PF06965 Na+/H+ antiporter 1 K08M4_RS08715 PF00005 ABC transporter K08M4_RS08720 PF01554 MatE K08M4_RS08725 PF11066 Protein of unknown function (DUF2867) K08M4_RS08725 PF13460 NAD(P)H-binding K08M4_RS08735 PF07690 Major Facilitator Superfamily K08M4_RS08740 PF00849 RNA pseudouridylate synthase K08M4_RS08740 PF01479 S4 domain K08M4_RS08745 PF04851 Type III restriction enzyme, res subunit K08M4_RS08745 PF00271 Helicase conserved C-terminal domain K08M4_RS08750 PF13188 PAS domain K08M4_RS08750 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS08750 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS08750 PF00563 EAL domain K08M4_RS08760 PF00072 Response regulator receiver domain K08M4_RS08760 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS08765 PF00672 HAMP domain K08M4_RS08765 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS08775 PF09335 SNARE associated Golgi protein K08M4_RS08780 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 K08M4_RS08780 PF00535 Glycosyl transferase family 2 K08M4_RS08785 PF01386 Ribosomal L25p family K08M4_RS08830 PF05016 ParE toxin of type II toxin-antitoxin system, parDE K08M4_RS08840 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS08840 PF00589 Phage integrase family K08M4_RS08855 PF04986 Putative transposase K08M4_RS08855 PF14319 Transposase zinc-binding domain K08M4_RS08860 PF00589 Phage integrase family K08M4_RS08860 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS08865 PF14319 Transposase zinc-binding domain K08M4_RS08865 PF04986 Putative transposase K08M4_RS08870 PF00589 Phage integrase family K08M4_RS08870 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS08875 PF00589 Phage integrase family K08M4_RS08875 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS08880 PF00067 Cytochrome P450 K08M4_RS08905 PF00268 Ribonucleotide reductase, small chain K08M4_RS08910 PF08343 Ribonucleotide reductase N-terminal K08M4_RS08910 PF00317 Ribonucleotide reductase, all-alpha domain K08M4_RS08910 PF02867 Ribonucleotide reductase, barrel domain K08M4_RS08915 PF07972 NrdI Flavodoxin like K08M4_RS08925 PF01521 Iron-sulphur cluster biosynthesis K08M4_RS08930 PF01458 Uncharacterized protein family (UPF0051) K08M4_RS08935 PF01458 Uncharacterized protein family (UPF0051) K08M4_RS08945 PF02657 Fe-S metabolism associated domain K08M4_RS08950 PF00672 HAMP domain K08M4_RS08950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS08950 PF02743 Cache domain K08M4_RS08955 PF02028 BCCT, betaine/carnitine/choline family transporter K08M4_RS08960 PF02028 BCCT, betaine/carnitine/choline family transporter K08M4_RS08965 PF00072 Response regulator receiver domain K08M4_RS08965 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS08970 PF07730 Histidine kinase K08M4_RS08970 PF17200 Single Cache domain 2 K08M4_RS08975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K08M4_RS08990 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M4_RS09005 PF00753 Metallo-beta-lactamase superfamily K08M4_RS09010 PF05951 Bacterial protein of unknown function (DUF882) K08M4_RS09015 PF03734 L,D-transpeptidase catalytic domain K08M4_RS09015 PF01471 Putative peptidoglycan binding domain K08M4_RS09040 PF00925 GTP cyclohydrolase II K08M4_RS09045 PF03918 Cytochrome C biogenesis protein K08M4_RS09050 PF08534 Redoxin K08M4_RS09055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K08M4_RS09055 PF01578 Cytochrome C assembly protein K08M4_RS09060 PF03916 Polysulphide reductase, NrfD K08M4_RS09065 PF13247 4Fe-4S dicluster domain K08M4_RS09075 PF02335 Cytochrome c552 K08M4_RS09080 PF00581 Rhodanese-like domain K08M4_RS09090 PF00521 DNA gyrase/topoisomerase IV, subunit A K08M4_RS09090 PF03989 DNA gyrase C-terminal domain, beta-propeller K08M4_RS09100 PF02867 Ribonucleotide reductase, barrel domain K08M4_RS09100 PF03477 ATP cone domain K08M4_RS09100 PF00317 Ribonucleotide reductase, all-alpha domain K08M4_RS09105 PF00268 Ribonucleotide reductase, small chain K08M4_RS09110 PF00970 Oxidoreductase FAD-binding domain K08M4_RS09110 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_RS09110 PF00175 Oxidoreductase NAD-binding domain K08M4_RS09115 PF00994 Probable molybdopterin binding domain K08M4_RS09140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K08M4_RS09145 PF16653 Saccharopine dehydrogenase C-terminal domain K08M4_RS09145 PF03435 Saccharopine dehydrogenase NADP binding domain K08M4_RS09150 PF00202 Aminotransferase class-III K08M4_RS09175 PF01066 CDP-alcohol phosphatidyltransferase K08M4_RS09180 PF01541 GIY-YIG catalytic domain K08M4_RS09180 PF02151 UvrB/uvrC motif K08M4_RS09180 PF08459 UvrC Helix-hairpin-helix N-terminal K08M4_RS09185 PF00072 Response regulator receiver domain K08M4_RS09185 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS09190 PF03104 DNA polymerase family B, exonuclease domain K08M4_RS09190 PF00136 DNA polymerase family B K08M4_RS09200 PF09285 Elongation factor P, C-terminal K08M4_RS09200 PF08207 Elongation factor P (EF-P) KOW-like domain K08M4_RS09200 PF01132 Elongation factor P (EF-P) OB domain K08M4_RS09205 PF04269 Protein of unknown function, DUF440 K08M4_RS09215 PF00849 RNA pseudouridylate synthase K08M4_RS09215 PF01479 S4 domain K08M4_RS09220 PF01300 Telomere recombination K08M4_RS09225 PF02811 PHP domain K08M4_RS09230 PF08056 Tryptophan operon leader peptide K08M4_RS09235 PF04715 Anthranilate synthase component I, N terminal region K08M4_RS09235 PF00425 chorismate binding enzyme K08M4_RS09240 PF00117 Glutamine amidotransferase class-I K08M4_RS09245 PF02885 Glycosyl transferase family, helical bundle domain K08M4_RS09245 PF00591 Glycosyl transferase family, a/b domain K08M4_RS09250 PF00218 Indole-3-glycerol phosphate synthase K08M4_RS09250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K08M4_RS09255 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_RS09260 PF00290 Tryptophan synthase alpha chain K08M4_RS09265 PF00375 Sodium:dicarboxylate symporter family K08M4_RS09270 PF13006 Insertion element 4 transposase N-terminal K08M4_RS09270 PF01609 Transposase DDE domain K08M4_RS09275 PF01170 Putative RNA methylase family UPF0020 K08M4_RS09275 PF10672 S-adenosylmethionine-dependent methyltransferase K08M4_RS09275 PF02926 THUMP domain K08M4_RS09280 PF00849 RNA pseudouridylate synthase K08M4_RS09285 PF12729 Four helix bundle sensory module for signal transduction K08M4_RS09285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS09285 PF00672 HAMP domain K08M4_RS09290 PF00209 Sodium:neurotransmitter symporter family K08M4_RS09295 PF13396 Phospholipase_D-nuclease N-terminal K08M4_RS09295 PF13091 PLD-like domain K08M4_RS09300 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M4_RS09305 PF03352 Methyladenine glycosylase K08M4_RS09310 PF00873 AcrB/AcrD/AcrF family K08M4_RS09315 PF13533 Biotin-lipoyl like K08M4_RS09320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS09320 PF00529 HlyD membrane-fusion protein of T1SS K08M4_RS09325 PF04024 PspC domain K08M4_RS09330 PF06667 Phage shock protein B K08M4_RS09335 PF04012 PspA/IM30 family K08M4_RS09340 PF00158 Sigma-54 interaction domain K08M4_RS09340 PF02954 Bacterial regulatory protein, Fis family K08M4_RS09345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS09350 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS09355 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M4_RS09355 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS09360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS09360 PF00005 ABC transporter K08M4_RS09365 PF00005 ABC transporter K08M4_RS09380 PF01368 DHH family K08M4_RS09380 PF02833 DHHA2 domain K08M4_RS09390 PF18364 Molybdopterin oxidoreductase N-terminal domain K08M4_RS09390 PF00384 Molybdopterin oxidoreductase K08M4_RS09390 PF01568 Molydopterin dinucleotide binding domain K08M4_RS09395 PF03264 NapC/NirT cytochrome c family, N-terminal region K08M4_RS09400 PF06796 Periplasmic nitrate reductase protein NapE K08M4_RS09405 PF03649 Uncharacterised protein family (UPF0014) K08M4_RS09410 PF01226 Formate/nitrite transporter K08M4_RS09435 PF00265 Thymidine kinase K08M4_RS09440 PF01406 tRNA synthetases class I (C) catalytic domain K08M4_RS09440 PF09190 DALR domain K08M4_RS09445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_RS09450 PF00149 Calcineurin-like phosphoesterase K08M4_RS09455 PF08668 HDOD domain K08M4_RS09455 PF00563 EAL domain K08M4_RS09460 PF02810 SEC-C motif K08M4_RS09465 PF01502 Phosphoribosyl-AMP cyclohydrolase K08M4_RS09465 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase K08M4_RS09470 PF00977 Histidine biosynthesis protein K08M4_RS09475 PF00977 Histidine biosynthesis protein K08M4_RS09480 PF00117 Glutamine amidotransferase class-I K08M4_RS09485 PF00475 Imidazoleglycerol-phosphate dehydratase K08M4_RS09485 PF08645 Polynucleotide kinase 3 phosphatase K08M4_RS09490 PF00155 Aminotransferase class I and II K08M4_RS09495 PF00815 Histidinol dehydrogenase K08M4_RS09500 PF01634 ATP phosphoribosyltransferase K08M4_RS09500 PF08029 HisG, C-terminal domain K08M4_RS09505 PF03553 Na+/H+ antiporter family K08M4_RS09510 PF00816 H-NS histone family K08M4_RS09515 PF00294 pfkB family carbohydrate kinase K08M4_RS09530 PF04356 Protein of unknown function (DUF489) K08M4_RS09535 PF08328 Adenylosuccinate lyase C-terminal K08M4_RS09535 PF00206 Lyase K08M4_RS09540 PF01435 Peptidase family M48 K08M4_RS09560 PF00155 Aminotransferase class I and II K08M4_RS09570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_RS09625 PF01634 ATP phosphoribosyltransferase K08M4_RS09625 PF08029 HisG, C-terminal domain K08M4_RS09630 PF03553 Na+/H+ antiporter family K08M4_RS09635 PF00816 H-NS histone family K08M4_RS09640 PF00294 pfkB family carbohydrate kinase K08M4_RS09655 PF04356 Protein of unknown function (DUF489) K08M4_RS09660 PF00206 Lyase K08M4_RS09660 PF08328 Adenylosuccinate lyase C-terminal K08M4_RS09665 PF01435 Peptidase family M48 K08M4_RS09680 PF08241 Methyltransferase domain K08M4_RS09685 PF00155 Aminotransferase class I and II K08M4_RS09690 PF06968 Biotin and Thiamin Synthesis associated domain K08M4_RS09690 PF04055 Radical SAM superfamily K08M4_RS09695 PF00202 Aminotransferase class-III K08M4_RS09710 PF02403 Seryl-tRNA synthetase N-terminal domain K08M4_RS09710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M4_RS09715 PF16193 AAA C-terminal domain K08M4_RS09715 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_RS09715 PF12002 MgsA AAA+ ATPase C terminal K08M4_RS09720 PF03548 Outer membrane lipoprotein carrier protein LolA K08M4_RS09725 PF01580 FtsK/SpoIIIE family K08M4_RS09725 PF17854 FtsK alpha domain K08M4_RS09725 PF09397 Ftsk gamma domain K08M4_RS09725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE K08M4_RS09730 PF01037 Lrp/AsnC ligand binding domain K08M4_RS09735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K08M4_RS09735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K08M4_RS09745 PF03466 LysR substrate binding domain K08M4_RS09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS09755 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K08M4_RS09760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K08M4_RS09765 PF18073 Rubredoxin metal binding domain K08M4_RS09770 PF06305 Lipopolysaccharide assembly protein A domain K08M4_RS09775 PF00216 Bacterial DNA-binding protein K08M4_RS09780 PF00575 S1 RNA binding domain K08M4_RS09785 PF02224 Cytidylate kinase K08M4_RS09790 PF02348 Cytidylyltransferase K08M4_RS09795 PF03966 Trm112p-like protein K08M4_RS09800 PF02606 Tetraacyldisaccharide-1-P 4'-kinase K08M4_RS09805 PF00664 ABC transporter transmembrane region K08M4_RS09805 PF00005 ABC transporter K08M4_RS09810 PF00753 Metallo-beta-lactamase superfamily K08M4_RS09810 PF03772 Competence protein K08M4_RS09820 PF12704 MacB-like periplasmic core domain K08M4_RS09820 PF02687 FtsX-like permease family K08M4_RS09825 PF00005 ABC transporter K08M4_RS09830 PF12704 MacB-like periplasmic core domain K08M4_RS09830 PF02687 FtsX-like permease family K08M4_RS09840 PF00271 Helicase conserved C-terminal domain K08M4_RS09840 PF00270 DEAD/DEAH box helicase K08M4_RS09840 PF03461 TRCF domain K08M4_RS09840 PF17757 UvrB interaction domain K08M4_RS09840 PF02559 CarD-like/TRCF domain K08M4_RS09855 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS09860 PF05728 Uncharacterised protein family (UPF0227) K08M4_RS09870 PF08139 Prokaryotic membrane lipoprotein lipid attachment site K08M4_RS09870 PF13036 Peptidoglycan-synthase activator LpoB K08M4_RS09885 PF01230 HIT domain K08M4_RS09890 PF00672 HAMP domain K08M4_RS09890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS09900 PF01048 Phosphorylase superfamily K08M4_RS09905 PF00403 Heavy-metal-associated domain K08M4_RS09910 PF01554 MatE K08M4_RS09915 PF00571 CBS domain K08M4_RS09915 PF01743 Poly A polymerase head domain K08M4_RS09925 PF00591 Glycosyl transferase family, a/b domain K08M4_RS09925 PF02885 Glycosyl transferase family, helical bundle domain K08M4_RS09930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_RS09940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_RS09945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_RS09950 PF03466 LysR substrate binding domain K08M4_RS09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS09965 PF14864 Alkyl sulfatase C-terminal K08M4_RS09965 PF14863 Alkyl sulfatase dimerisation K08M4_RS09965 PF00753 Metallo-beta-lactamase superfamily K08M4_RS09975 PF00873 AcrB/AcrD/AcrF family K08M4_RS09985 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS09985 PF17932 Tetracyclin repressor-like, C-terminal domain K08M4_RS09990 PF03466 LysR substrate binding domain K08M4_RS09990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS09995 PF08803 Putative mono-oxygenase ydhR K08M4_RS10005 PF08212 Lipocalin-like domain K08M4_RS10010 PF01979 Amidohydrolase family K08M4_RS10020 PF00005 ABC transporter K08M4_RS10025 PF01497 Periplasmic binding protein K08M4_RS10030 PF01032 FecCD transport family K08M4_RS10040 PF00593 TonB dependent receptor K08M4_RS10040 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS10075 PF05036 Sporulation related domain K08M4_RS10075 PF03330 Lytic transglycolase K08M4_RS10085 PF01810 LysE type translocator K08M4_RS10090 PF01037 Lrp/AsnC ligand binding domain K08M4_RS10090 PF13404 AsnC-type helix-turn-helix domain K08M4_RS10105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS10105 PF03466 LysR substrate binding domain K08M4_RS10110 PF11975 Family 4 glycosyl hydrolase C-terminal domain K08M4_RS10110 PF02056 Family 4 glycosyl hydrolase K08M4_RS10115 PF04794 YdjC-like protein K08M4_RS10120 PF00376 MerR family regulatory protein K08M4_RS10120 PF09278 MerR, DNA binding K08M4_RS10135 PF03109 ABC1 family K08M4_RS10140 PF00255 Glutathione peroxidase K08M4_RS10160 PF00535 Glycosyl transferase family 2 K08M4_RS10165 PF13439 Glycosyltransferase Family 4 K08M4_RS10165 PF00534 Glycosyl transferases group 1 K08M4_RS10170 PF01693 Caulimovirus viroplasmin K08M4_RS10205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M4_RS10210 PF09619 Type III secretion system lipoprotein chaperone (YscW) K08M4_RS10225 PF13404 AsnC-type helix-turn-helix domain K08M4_RS10225 PF01037 Lrp/AsnC ligand binding domain K08M4_RS10230 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_RS10240 PF00873 AcrB/AcrD/AcrF family K08M4_RS10245 PF13533 Biotin-lipoyl like K08M4_RS10295 PF07690 Major Facilitator Superfamily K08M4_RS10300 PF03601 Conserved hypothetical protein 698 K08M4_RS10305 PF13193 AMP-binding enzyme C-terminal domain K08M4_RS10305 PF00501 AMP-binding enzyme K08M4_RS10310 PF13378 Enolase C-terminal domain-like K08M4_RS10315 PF00378 Enoyl-CoA hydratase/isomerase K08M4_RS10320 PF00561 alpha/beta hydrolase fold K08M4_RS10325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M4_RS10325 PF16582 Middle domain of thiamine pyrophosphate K08M4_RS10325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M4_RS10330 PF00425 chorismate binding enzyme K08M4_RS10335 PF00155 Aminotransferase class I and II K08M4_RS10350 PF01966 HD domain K08M4_RS10350 PF13286 Phosphohydrolase-associated domain K08M4_RS10370 PF13145 PPIC-type PPIASE domain K08M4_RS10375 PF00216 Bacterial DNA-binding protein K08M4_RS10380 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_RS10380 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M4_RS10380 PF02190 ATP-dependent protease La (LON) substrate-binding domain K08M4_RS10385 PF07724 AAA domain (Cdc48 subfamily) K08M4_RS10385 PF10431 C-terminal, D2-small domain, of ClpB protein K08M4_RS10385 PF06689 ClpX C4-type zinc finger K08M4_RS10390 PF00574 Clp protease K08M4_RS10395 PF05697 Bacterial trigger factor protein (TF) K08M4_RS10395 PF05698 Bacterial trigger factor protein (TF) C-terminus K08M4_RS10395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_RS10400 PF02743 Cache domain K08M4_RS10400 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS10405 PF00072 Response regulator receiver domain K08M4_RS10405 PF00158 Sigma-54 interaction domain K08M4_RS10405 PF02954 Bacterial regulatory protein, Fis family K08M4_RS10410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K08M4_RS10415 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K08M4_RS10420 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M4_RS10430 PF01648 4'-phosphopantetheinyl transferase superfamily K08M4_RS10440 PF00698 Acyl transferase domain K08M4_RS10440 PF16197 Ketoacyl-synthetase C-terminal extension K08M4_RS10440 PF14765 Polyketide synthase dehydratase K08M4_RS10440 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_RS10440 PF08659 KR domain K08M4_RS10440 PF00550 Phosphopantetheine attachment site K08M4_RS10440 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_RS10450 PF16197 Ketoacyl-synthetase C-terminal extension K08M4_RS10450 PF00698 Acyl transferase domain K08M4_RS10450 PF14765 Polyketide synthase dehydratase K08M4_RS10450 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_RS10450 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_RS10450 PF08659 KR domain K08M4_RS10450 PF00550 Phosphopantetheine attachment site K08M4_RS10455 PF00698 Acyl transferase domain K08M4_RS10455 PF03060 Nitronate monooxygenase K08M4_RS10460 PF01612 3'-5' exonuclease K08M4_RS10460 PF00570 HRDC domain K08M4_RS10465 PF00501 AMP-binding enzyme K08M4_RS10465 PF13193 AMP-binding enzyme C-terminal domain K08M4_RS10470 PF00561 alpha/beta hydrolase fold K08M4_RS10485 PF00814 Glycoprotease family K08M4_RS10490 PF04851 Type III restriction enzyme, res subunit K08M4_RS10490 PF13307 Helicase C-terminal domain K08M4_RS10500 PF00551 Formyl transferase K08M4_RS10500 PF01842 ACT domain K08M4_RS10505 PF06185 YecM protein K08M4_RS10510 PF03485 Arginyl tRNA synthetase N terminal domain K08M4_RS10510 PF05746 DALR anticodon binding domain K08M4_RS10510 PF00750 tRNA synthetases class I (R) K08M4_RS10535 PF12833 Helix-turn-helix domain K08M4_RS10540 PF01297 Zinc-uptake complex component A periplasmic K08M4_RS10545 PF00005 ABC transporter K08M4_RS10550 PF00950 ABC 3 transport family K08M4_RS10555 PF02629 CoA binding domain K08M4_RS10555 PF00549 CoA-ligase K08M4_RS10560 PF08442 ATP-grasp domain K08M4_RS10560 PF00549 CoA-ligase K08M4_RS10565 PF02817 e3 binding domain K08M4_RS10565 PF00364 Biotin-requiring enzyme K08M4_RS10565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K08M4_RS10570 PF00676 Dehydrogenase E1 component K08M4_RS10570 PF16870 2-oxoglutarate dehydrogenase C-terminal K08M4_RS10570 PF02779 Transketolase, pyrimidine binding domain K08M4_RS10570 PF16078 2-oxoglutarate dehydrogenase N-terminus K08M4_RS10575 PF13085 2Fe-2S iron-sulfur cluster binding domain K08M4_RS10580 PF02910 Fumarate reductase flavoprotein C-term K08M4_RS10580 PF00890 FAD binding domain K08M4_RS10585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K08M4_RS10590 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K08M4_RS10595 PF00285 Citrate synthase, C-terminal domain K08M4_RS10600 PF01784 NIF3 (NGG1p interacting factor 3) K08M4_RS10610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_RS10610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_RS10610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_RS10610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_RS10615 PF17206 SeqA protein N-terminal domain K08M4_RS10615 PF03925 SeqA protein C-terminal domain K08M4_RS10620 PF12697 Alpha/beta hydrolase family K08M4_RS10630 PF00258 Flavodoxin K08M4_RS10640 PF01475 Ferric uptake regulator family K08M4_RS10645 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain K08M4_RS10645 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M4_RS10650 PF02378 Phosphotransferase system, EIIC K08M4_RS10650 PF00367 phosphotransferase system, EIIB K08M4_RS10650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K08M4_RS10655 PF01979 Amidohydrolase family K08M4_RS10660 PF01047 MarR family K08M4_RS10660 PF00480 ROK family K08M4_RS10665 PF00999 Sodium/hydrogen exchanger family K08M4_RS10665 PF02254 TrkA-N domain K08M4_RS10670 PF13537 Glutamine amidotransferase domain K08M4_RS10670 PF00733 Asparagine synthase K08M4_RS10675 PF02357 Transcription termination factor nusG K08M4_RS10680 PF00854 POT family K08M4_RS10685 PF00762 Ferrochelatase K08M4_RS10690 PF05191 Adenylate kinase, active site lid K08M4_RS10695 PF00183 Hsp90 protein K08M4_RS10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS10700 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS10705 PF17323 Trans-membrane regulatory protein ToxS K08M4_RS10715 PF12850 Calcineurin-like phosphoesterase superfamily domain K08M4_RS10720 PF00571 CBS domain K08M4_RS10730 PF07556 Protein of unknown function (DUF1538) K08M4_RS10735 PF07556 Protein of unknown function (DUF1538) K08M4_RS10740 PF01370 NAD dependent epimerase/dehydratase family K08M4_RS10740 PF08338 Domain of unknown function (DUF1731) K08M4_RS10745 PF00106 short chain dehydrogenase K08M4_RS10750 PF00085 Thioredoxin K08M4_RS10755 PF01145 SPFH domain / Band 7 family K08M4_RS10755 PF16200 C-terminal region of band_7 K08M4_RS10850 PF01145 SPFH domain / Band 7 family K08M4_RS10850 PF16200 C-terminal region of band_7 K08M4_RS10860 PF13411 MerR HTH family regulatory protein K08M4_RS10870 PF13609 Gram-negative porin K08M4_RS10880 PF12826 Helix-hairpin-helix motif K08M4_RS10880 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K08M4_RS10880 PF03120 NAD-dependent DNA ligase OB-fold domain K08M4_RS10880 PF01653 NAD-dependent DNA ligase adenylation domain K08M4_RS10880 PF00533 BRCA1 C Terminus (BRCT) domain K08M4_RS10885 PF01653 NAD-dependent DNA ligase adenylation domain K08M4_RS10885 PF00533 BRCA1 C Terminus (BRCT) domain K08M4_RS10885 PF03120 NAD-dependent DNA ligase OB-fold domain K08M4_RS10890 PF04354 ZipA, C-terminal FtsZ-binding domain K08M4_RS10900 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_RS10905 PF00381 PTS HPr component phosphorylation site K08M4_RS10910 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_RS10910 PF00391 PEP-utilising enzyme, mobile domain K08M4_RS10910 PF05524 PEP-utilising enzyme, N-terminal K08M4_RS10915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K08M4_RS10920 PF07196 Flagellin hook IN motif K08M4_RS10920 PF00700 Bacterial flagellin C-terminal helical region K08M4_RS10920 PF00669 Bacterial flagellin N-terminal helical region K08M4_RS10925 PF00669 Bacterial flagellin N-terminal helical region K08M4_RS10925 PF07196 Flagellin hook IN motif K08M4_RS10925 PF00700 Bacterial flagellin C-terminal helical region K08M4_RS10930 PF04261 Dyp-type peroxidase family K08M4_RS10935 PF11143 Protein of unknown function (DUF2919) K08M4_RS10960 PF00924 Mechanosensitive ion channel K08M4_RS10960 PF12795 Mechanosensitive ion channel porin domain K08M4_RS10960 PF12794 Mechanosensitive ion channel inner membrane domain 1 K08M4_RS10970 PF18030 RimK PreATP-grasp domain K08M4_RS10970 PF08443 RimK-like ATP-grasp domain K08M4_RS10980 PF03960 ArsC family K08M4_RS10985 PF01546 Peptidase family M20/M25/M40 K08M4_RS10985 PF07687 Peptidase dimerisation domain K08M4_RS11000 PF06804 NlpB/DapX lipoprotein K08M4_RS11005 PF00701 Dihydrodipicolinate synthetase family K08M4_RS11010 PF01842 ACT domain K08M4_RS11015 PF00578 AhpC/TSA family K08M4_RS11020 PF01594 AI-2E family transporter K08M4_RS11030 PF01435 Peptidase family M48 K08M4_RS11030 PF13181 Tetratricopeptide repeat K08M4_RS11035 PF03960 ArsC family K08M4_RS11040 PF03358 NADPH-dependent FMN reductase K08M4_RS11055 PF00860 Permease family K08M4_RS11065 PF00586 AIR synthase related protein, N-terminal domain K08M4_RS11065 PF02769 AIR synthase related protein, C-terminal domain K08M4_RS11070 PF00551 Formyl transferase K08M4_RS11075 PF13230 Glutamine amidotransferases class-II K08M4_RS11080 PF13580 SIS domain K08M4_RS11085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M4_RS11085 PF09317 Domain of unknown function (DUF1974) K08M4_RS11085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M4_RS11085 PF02770 Acyl-CoA dehydrogenase, middle domain K08M4_RS11095 PF00929 Exonuclease K08M4_RS11100 PF00075 RNase H K08M4_RS11105 PF08241 Methyltransferase domain K08M4_RS11110 PF16123 Hydroxyacylglutathione hydrolase C-terminus K08M4_RS11110 PF00753 Metallo-beta-lactamase superfamily K08M4_RS11115 PF01464 Transglycosylase SLT domain K08M4_RS11115 PF01476 LysM domain K08M4_RS11125 PF03372 Endonuclease/Exonuclease/phosphatase family K08M4_RS11130 PF00543 Nitrogen regulatory protein P-II K08M4_RS11135 PF00034 Cytochrome c K08M4_RS11140 PF11734 TilS substrate C-terminal domain K08M4_RS11140 PF09179 TilS substrate binding domain K08M4_RS11140 PF01171 PP-loop family K08M4_RS11145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K08M4_RS11150 PF01336 OB-fold nucleic acid binding domain K08M4_RS11150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M4_RS11150 PF14579 Helix-hairpin-helix motif K08M4_RS11150 PF02811 PHP domain K08M4_RS11150 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M4_RS11155 PF01351 Ribonuclease HII K08M4_RS11160 PF02684 Lipid-A-disaccharide synthetase K08M4_RS11165 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K08M4_RS11165 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS11170 PF07977 FabA-like domain K08M4_RS11175 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K08M4_RS11175 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS11180 PF03938 Outer membrane protein (OmpH-like) K08M4_RS11185 PF07244 Surface antigen variable number repeat K08M4_RS11185 PF01103 Surface antigen K08M4_RS11190 PF17820 PDZ domain K08M4_RS11190 PF02163 Peptidase family M50 K08M4_RS11195 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain K08M4_RS11195 PF13288 DXP reductoisomerase C-terminal domain K08M4_RS11195 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase K08M4_RS11205 PF01255 Putative undecaprenyl diphosphate synthase K08M4_RS11215 PF01765 Ribosome recycling factor K08M4_RS11220 PF00696 Amino acid kinase family K08M4_RS11225 PF00889 Elongation factor TS K08M4_RS11230 PF00318 Ribosomal protein S2 K08M4_RS11235 PF00557 Metallopeptidase family M24 K08M4_RS11240 PF08335 GlnD PII-uridylyltransferase K08M4_RS11240 PF01842 ACT domain K08M4_RS11240 PF01909 Nucleotidyltransferase domain K08M4_RS11240 PF01966 HD domain K08M4_RS11245 PF11944 Protein of unknown function (DUF3461) K08M4_RS11250 PF00849 RNA pseudouridylate synthase K08M4_RS11255 PF04287 tRNA pseudouridine synthase C K08M4_RS11285 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 K08M4_RS11290 PF03806 AbgT putative transporter family K08M4_RS11295 PF00444 Ribosomal protein L36 K08M4_RS11300 PF01197 Ribosomal protein L31 K08M4_RS11305 PF01980 tRNA-methyltransferase O K08M4_RS11305 PF18389 TrmO C-terminal domain K08M4_RS11310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M4_RS11310 PF03129 Anticodon binding domain K08M4_RS11310 PF04073 Aminoacyl-tRNA editing domain K08M4_RS11320 PF06786 Uncharacterised protein family (UPF0253) K08M4_RS11340 PF13358 DDE superfamily endonuclease K08M4_RS11345 PF00464 Serine hydroxymethyltransferase K08M4_RS11355 PF00128 Alpha amylase, catalytic domain K08M4_RS11355 PF16657 Maltogenic Amylase, C-terminal domain K08M4_RS11360 PF02378 Phosphotransferase system, EIIC K08M4_RS11360 PF00367 phosphotransferase system, EIIB K08M4_RS11365 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS11380 PF00005 ABC transporter K08M4_RS11380 PF09383 NIL domain K08M4_RS11385 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS11390 PF03180 NLPA lipoprotein K08M4_RS11395 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) K08M4_RS11400 PF07348 Syd protein (SUKH-2) K08M4_RS11405 PF14489 QueF-like protein K08M4_RS11405 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term K08M4_RS11415 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS11420 PF11892 Domain of unknown function (DUF3412) K08M4_RS11420 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases K08M4_RS11420 PF03641 Possible lysine decarboxylase K08M4_RS11425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K08M4_RS11425 PF01367 5'-3' exonuclease, C-terminal SAM fold K08M4_RS11430 PF00209 Sodium:neurotransmitter symporter family K08M4_RS11445 PF00270 DEAD/DEAH box helicase K08M4_RS11445 PF00570 HRDC domain K08M4_RS11445 PF16124 RecQ zinc-binding K08M4_RS11445 PF09382 RQC domain K08M4_RS11445 PF00271 Helicase conserved C-terminal domain K08M4_RS11450 PF11799 impB/mucB/samB family C-terminal domain K08M4_RS11450 PF11798 IMS family HHH motif K08M4_RS11450 PF00817 impB/mucB/samB family K08M4_RS11455 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS11455 PF00072 Response regulator receiver domain K08M4_RS11460 PF04400 (Na+)-NQR maturation NqrM K08M4_RS11465 PF02424 ApbE family K08M4_RS11470 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_RS11470 PF00175 Oxidoreductase NAD-binding domain K08M4_RS11470 PF00970 Oxidoreductase FAD-binding domain K08M4_RS11475 PF02508 Rnf-Nqr subunit, membrane protein K08M4_RS11480 PF02508 Rnf-Nqr subunit, membrane protein K08M4_RS11485 PF04205 FMN-binding domain K08M4_RS11490 PF03116 NQR2, RnfD, RnfE family K08M4_RS11495 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K08M4_RS11495 PF11973 NQRA C-terminal domain K08M4_RS11500 PF01722 BolA-like protein K08M4_RS11505 PF05175 Methyltransferase small domain K08M4_RS11515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_RS11520 PF07690 Major Facilitator Superfamily K08M4_RS11530 PF03502 Nucleoside-specific channel-forming protein, Tsx K08M4_RS11535 PF08546 Ketopantoate reductase PanE/ApbA C terminal K08M4_RS11535 PF02558 Ketopantoate reductase PanE/ApbA K08M4_RS11540 PF00266 Aminotransferase class-V K08M4_RS11545 PF02657 Fe-S metabolism associated domain K08M4_RS11550 PF00899 ThiF family K08M4_RS11555 PF06725 3D domain K08M4_RS11555 PF03562 MltA specific insert domain K08M4_RS11565 PF00583 Acetyltransferase (GNAT) family K08M4_RS11565 PF00696 Amino acid kinase family K08M4_RS11580 PF13538 UvrD-like helicase C-terminal domain K08M4_RS11585 PF12705 PD-(D/E)XK nuclease superfamily K08M4_RS11585 PF13361 UvrD-like helicase C-terminal domain K08M4_RS11585 PF00580 UvrD/REP helicase N-terminal domain K08M4_RS11590 PF17946 RecC C-terminal domain K08M4_RS11600 PF03466 LysR substrate binding domain K08M4_RS11600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS11605 PF07130 YebG protein K08M4_RS11620 PF01914 MarC family integral membrane protein K08M4_RS11625 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_RS11625 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle K08M4_RS11630 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain K08M4_RS11630 PF02769 AIR synthase related protein, C-terminal domain K08M4_RS11630 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal K08M4_RS11635 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS11635 PF01464 Transglycosylase SLT domain K08M4_RS11640 PF14437 MafB19-like deaminase K08M4_RS11645 PF01595 Cyclin M transmembrane N-terminal domain K08M4_RS11645 PF03471 Transporter associated domain K08M4_RS11645 PF00571 CBS domain K08M4_RS11650 PF03806 AbgT putative transporter family K08M4_RS11675 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS11675 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor K08M4_RS11680 PF00684 DnaJ central domain K08M4_RS11680 PF01556 DnaJ C terminal domain K08M4_RS11680 PF00226 DnaJ domain K08M4_RS11685 PF00012 Hsp70 protein K08M4_RS11690 PF13006 Insertion element 4 transposase N-terminal K08M4_RS11690 PF01609 Transposase DDE domain K08M4_RS11700 PF00375 Sodium:dicarboxylate symporter family K08M4_RS11705 PF01025 GrpE K08M4_RS11710 PF01513 ATP-NAD kinase K08M4_RS11715 PF02463 RecF/RecN/SMC N terminal domain K08M4_RS11720 PF04355 SmpA / OmlA family K08M4_RS11725 PF03658 RnfH family Ubiquitin K08M4_RS11730 PF03364 Polyketide cyclase / dehydrase and lipid transport K08M4_RS11735 PF01668 SmpB protein K08M4_RS11745 PF18030 RimK PreATP-grasp domain K08M4_RS11745 PF08443 RimK-like ATP-grasp domain K08M4_RS11770 PF01553 Acyltransferase K08M4_RS11775 PF00753 Metallo-beta-lactamase superfamily K08M4_RS11775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain K08M4_RS11775 PF10996 Beta-Casp domain K08M4_RS11780 PF01235 Sodium:alanine symporter family K08M4_RS11785 PF01184 GPR1/FUN34/yaaH family K08M4_RS11790 PF06483 Chitinase C K08M4_RS11790 PF00704 Glycosyl hydrolases family 18 K08M4_RS11795 PF00958 GMP synthase C terminal domain K08M4_RS11795 PF02540 NAD synthase K08M4_RS11795 PF00117 Glutamine amidotransferase class-I K08M4_RS11800 PF00478 IMP dehydrogenase / GMP reductase domain K08M4_RS11800 PF00571 CBS domain K08M4_RS11805 PF13742 OB-fold nucleic acid binding domain K08M4_RS11805 PF02601 Exonuclease VII, large subunit K08M4_RS11815 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS11815 PF08448 PAS fold K08M4_RS11820 PF01411 tRNA synthetases class II (A) K08M4_RS11820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M4_RS11820 PF02272 DHHA1 domain K08M4_RS11825 PF01926 50S ribosome-binding GTPase K08M4_RS11825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K08M4_RS11830 PF13360 PQQ-like domain K08M4_RS11835 PF09976 Tetratricopeptide repeat-like domain K08M4_RS11840 PF03129 Anticodon binding domain K08M4_RS11840 PF13393 Histidyl-tRNA synthetase K08M4_RS11845 PF04551 GcpE protein K08M4_RS11850 PF13464 Domain of unknown function (DUF4115) K08M4_RS11855 PF04055 Radical SAM superfamily K08M4_RS11860 PF00334 Nucleoside diphosphate kinase K08M4_RS11865 PF12404 Peptidase K08M4_RS11865 PF00883 Cytosol aminopeptidase family, catalytic domain K08M4_RS11870 PF04384 Iron-sulphur cluster assembly K08M4_RS11875 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_RS11880 PF00012 Hsp70 protein K08M4_RS11885 PF07743 HSCB C-terminal oligomerisation domain K08M4_RS11885 PF00226 DnaJ domain K08M4_RS11890 PF01521 Iron-sulphur cluster biosynthesis K08M4_RS11895 PF01592 NifU-like N terminal domain K08M4_RS11900 PF00266 Aminotransferase class-V K08M4_RS11905 PF02082 Transcriptional regulator K08M4_RS11910 PF00588 SpoU rRNA Methylase family K08M4_RS11915 PF00459 Inositol monophosphatase family K08M4_RS11920 PF07549 SecD/SecF GG Motif K08M4_RS11920 PF02355 Protein export membrane protein K08M4_RS11925 PF13721 SecD export protein N-terminal TM region K08M4_RS11925 PF02355 Protein export membrane protein K08M4_RS11925 PF07549 SecD/SecF GG Motif K08M4_RS11930 PF02699 Preprotein translocase subunit K08M4_RS11935 PF01702 Queuine tRNA-ribosyltransferase K08M4_RS11940 PF02547 Queuosine biosynthesis protein K08M4_RS11945 PF00571 CBS domain K08M4_RS11950 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS11955 PF00251 Glycosyl hydrolases family 32 N-terminal domain K08M4_RS11955 PF08244 Glycosyl hydrolases family 32 C terminal K08M4_RS11960 PF00367 phosphotransferase system, EIIB K08M4_RS11960 PF02378 Phosphotransferase system, EIIC K08M4_RS11965 PF00294 pfkB family carbohydrate kinase K08M4_RS11970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS11975 PF03466 LysR substrate binding domain K08M4_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS11980 PF10417 C-terminal domain of 1-Cys peroxiredoxin K08M4_RS11980 PF00578 AhpC/TSA family K08M4_RS11985 PF03932 CutC family K08M4_RS12000 PF01895 PhoU domain K08M4_RS12005 PF00005 ABC transporter K08M4_RS12010 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS12020 PF17941 Polyphosphate kinase C-terminal domain 1 K08M4_RS12020 PF13090 Polyphosphate kinase C-terminal domain 2 K08M4_RS12020 PF02503 Polyphosphate kinase middle domain K08M4_RS12020 PF13089 Polyphosphate kinase N-terminal domain K08M4_RS12025 PF02541 Ppx/GppA phosphatase family K08M4_RS12030 PF12849 PBP superfamily domain K08M4_RS12035 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS12035 PF00989 PAS fold K08M4_RS12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS12035 PF11808 Phosphate regulon sensor protein PhoR K08M4_RS12040 PF00072 Response regulator receiver domain K08M4_RS12040 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS12045 PF04381 Putative exonuclease, RdgC K08M4_RS12050 PF16325 Peptidase family U32 C-terminal domain K08M4_RS12050 PF01136 Peptidase family U32 K08M4_RS12055 PF12838 4Fe-4S dicluster domain K08M4_RS12065 PF03411 Penicillin-insensitive murein endopeptidase K08M4_RS12070 PF13358 DDE superfamily endonuclease K08M4_RS12110 PF02861 Clp amino terminal domain, pathogenicity island component K08M4_RS12110 PF17871 AAA lid domain K08M4_RS12110 PF07724 AAA domain (Cdc48 subfamily) K08M4_RS12110 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_RS12110 PF10431 C-terminal, D2-small domain, of ClpB protein K08M4_RS12115 PF02578 Multi-copper polyphenol oxidoreductase laccase K08M4_RS12120 PF00849 RNA pseudouridylate synthase K08M4_RS12120 PF01479 S4 domain K08M4_RS12125 PF13525 Outer membrane lipoprotein K08M4_RS12130 PF01464 Transglycosylase SLT domain K08M4_RS12135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K08M4_RS12140 PF00800 Prephenate dehydratase K08M4_RS12140 PF01817 Chorismate mutase type II K08M4_RS12145 PF00563 EAL domain K08M4_RS12145 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS12150 PF01931 Protein of unknown function DUF84 K08M4_RS12155 PF01371 Trp repressor protein K08M4_RS12160 PF14718 Soluble lytic murein transglycosylase L domain K08M4_RS12160 PF01464 Transglycosylase SLT domain K08M4_RS12165 PF00005 ABC transporter K08M4_RS12165 PF12848 ABC transporter K08M4_RS12170 PF07238 PilZ domain K08M4_RS12175 PF01551 Peptidase family M23 K08M4_RS12175 PF04225 Opacity-associated protein A LysM-like domain K08M4_RS12180 PF01817 Chorismate mutase type II K08M4_RS12180 PF02153 Prephenate dehydrogenase K08M4_RS12185 PF00793 DAHP synthetase I family K08M4_RS12190 PF00933 Glycosyl hydrolase family 3 N terminal domain K08M4_RS12195 PF03702 Anhydro-N-acetylmuramic acid kinase K08M4_RS12200 PF13580 SIS domain K08M4_RS12210 PF02554 Carbon starvation protein CstA K08M4_RS12215 PF07694 5TMR of 5TMR-LYT K08M4_RS12215 PF06580 Histidine kinase K08M4_RS12220 PF00072 Response regulator receiver domain K08M4_RS12220 PF04397 LytTr DNA-binding domain K08M4_RS12225 PF02401 LytB protein K08M4_RS12230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_RS12235 PF01252 Signal peptidase (SPase) II K08M4_RS12240 PF06827 Zinc finger found in FPG and IleRS K08M4_RS12240 PF08264 Anticodon-binding domain of tRNA K08M4_RS12240 PF00133 tRNA synthetases class I (I, L, M and V) K08M4_RS12245 PF01687 Riboflavin kinase K08M4_RS12245 PF06574 FAD synthetase K08M4_RS12250 PF03023 Lipid II flippase MurJ K08M4_RS12255 PF01649 Ribosomal protein S20 K08M4_RS12260 PF01022 Bacterial regulatory protein, arsR family K08M4_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS12265 PF03466 LysR substrate binding domain K08M4_RS12270 PF02690 Na+/Pi-cotransporter K08M4_RS12275 PF00303 Thymidylate synthase K08M4_RS12280 PF01790 Prolipoprotein diacylglyceryl transferase K08M4_RS12285 PF01925 Sulfite exporter TauE/SafE K08M4_RS12290 PF01590 GAF domain K08M4_RS12290 PF05524 PEP-utilising enzyme, N-terminal K08M4_RS12290 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_RS12290 PF00391 PEP-utilising enzyme, mobile domain K08M4_RS12295 PF00293 NUDIX domain K08M4_RS12300 PF02976 DNA mismatch repair enzyme MutH K08M4_RS12320 PF06505 Activator of aromatic catabolism K08M4_RS12320 PF02830 V4R domain K08M4_RS12320 PF00158 Sigma-54 interaction domain K08M4_RS12320 PF02954 Bacterial regulatory protein, Fis family K08M4_RS12325 PF00152 tRNA synthetases class II (D, K and N) K08M4_RS12325 PF01336 OB-fold nucleic acid binding domain K08M4_RS12335 PF17768 RecJ OB domain K08M4_RS12335 PF02272 DHHA1 domain K08M4_RS12335 PF01368 DHH family K08M4_RS12340 PF13098 Thioredoxin-like domain K08M4_RS12340 PF10411 Disulfide bond isomerase protein N-terminus K08M4_RS12345 PF00589 Phage integrase family K08M4_RS12345 PF02899 Phage integrase, N-terminal SAM-like domain K08M4_RS12350 PF00258 Flavodoxin K08M4_RS12355 PF05525 Branched-chain amino acid transport protein K08M4_RS12360 PF05175 Methyltransferase small domain K08M4_RS12365 PF00270 DEAD/DEAH box helicase K08M4_RS12365 PF00271 Helicase conserved C-terminal domain K08M4_RS12370 PF03883 Peroxide stress protein YaaA K08M4_RS12375 PF01235 Sodium:alanine symporter family K08M4_RS12390 PF03167 Uracil DNA glycosylase superfamily K08M4_RS12395 PF01261 Xylose isomerase-like TIM barrel K08M4_RS12400 PF01228 Glycine radical K08M4_RS12405 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_RS12405 PF14821 Threonine synthase N terminus K08M4_RS12410 PF08544 GHMP kinases C terminal K08M4_RS12410 PF00288 GHMP kinases N terminal domain K08M4_RS12415 PF00742 Homoserine dehydrogenase K08M4_RS12415 PF01842 ACT domain K08M4_RS12415 PF00696 Amino acid kinase family K08M4_RS12415 PF03447 Homoserine dehydrogenase, NAD binding domain K08M4_RS12415 PF13840 ACT domain K08M4_RS12425 PF03737 Aldolase/RraA K08M4_RS12435 PF00072 Response regulator receiver domain K08M4_RS12435 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS12445 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS12445 PF00072 Response regulator receiver domain K08M4_RS12445 PF00989 PAS fold K08M4_RS12445 PF01627 Hpt domain K08M4_RS12445 PF18415 Histidine kinase receptor ArcB trans-membrane domain K08M4_RS12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS12450 PF00563 EAL domain K08M4_RS12450 PF00360 Phytochrome region K08M4_RS12450 PF01590 GAF domain K08M4_RS12450 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS12455 PF16199 Radical_SAM C-terminal domain K08M4_RS12455 PF04055 Radical SAM superfamily K08M4_RS12460 PF00310 Glutamine amidotransferases class-II K08M4_RS12460 PF04898 Glutamate synthase central domain K08M4_RS12460 PF01645 Conserved region in glutamate synthase K08M4_RS12460 PF01493 GXGXG motif K08M4_RS12465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K08M4_RS12465 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS12470 PF01493 GXGXG motif K08M4_RS12470 PF00310 Glutamine amidotransferases class-II K08M4_RS12470 PF04898 Glutamate synthase central domain K08M4_RS12470 PF01645 Conserved region in glutamate synthase K08M4_RS12475 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS12475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K08M4_RS12485 PF01048 Phosphorylase superfamily K08M4_RS12495 PF01497 Periplasmic binding protein K08M4_RS12500 PF03458 UPF0126 domain K08M4_RS12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS12505 PF03466 LysR substrate binding domain K08M4_RS12510 PF01925 Sulfite exporter TauE/SafE K08M4_RS12515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K08M4_RS12515 PF02142 MGS-like domain K08M4_RS12515 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K08M4_RS12520 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K08M4_RS12520 PF00117 Glutamine amidotransferase class-I K08M4_RS12525 PF01113 Dihydrodipicolinate reductase, N-terminus K08M4_RS12525 PF05173 Dihydrodipicolinate reductase, C-terminus K08M4_RS12530 PF00293 NUDIX domain K08M4_RS12535 PF02810 SEC-C motif K08M4_RS12535 PF07517 SecA DEAD-like domain K08M4_RS12535 PF01043 SecA preprotein cross-linking domain K08M4_RS12535 PF07516 SecA Wing and Scaffold domain K08M4_RS12540 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase K08M4_RS12545 PF12327 FtsZ family, C-terminal domain K08M4_RS12545 PF00091 Tubulin/FtsZ family, GTPase domain K08M4_RS12550 PF02491 SHS2 domain inserted in FTSA K08M4_RS12555 PF03799 Cell division protein FtsQ K08M4_RS12555 PF08478 POTRA domain, FtsQ-type K08M4_RS12565 PF08245 Mur ligase middle domain K08M4_RS12565 PF01225 Mur ligase family, catalytic domain K08M4_RS12565 PF02875 Mur ligase family, glutamate ligase domain K08M4_RS12570 PF04101 Glycosyltransferase family 28 C-terminal domain K08M4_RS12570 PF03033 Glycosyltransferase family 28 N-terminal domain K08M4_RS12575 PF01098 Cell cycle protein K08M4_RS12580 PF08245 Mur ligase middle domain K08M4_RS12580 PF02875 Mur ligase family, glutamate ligase domain K08M4_RS12585 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K08M4_RS12585 PF00953 Glycosyl transferase family 4 K08M4_RS12590 PF01225 Mur ligase family, catalytic domain K08M4_RS12590 PF08245 Mur ligase middle domain K08M4_RS12590 PF02875 Mur ligase family, glutamate ligase domain K08M4_RS12595 PF01225 Mur ligase family, catalytic domain K08M4_RS12595 PF02875 Mur ligase family, glutamate ligase domain K08M4_RS12595 PF08245 Mur ligase middle domain K08M4_RS12600 PF00905 Penicillin binding protein transpeptidase domain K08M4_RS12600 PF03717 Penicillin-binding Protein dimerisation domain K08M4_RS12605 PF04999 Cell division protein FtsL K08M4_RS12610 PF01795 MraW methylase family K08M4_RS12620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_RS12625 PF04348 LppC putative lipoprotein K08M4_RS12630 PF02021 Uncharacterised protein family UPF0102 K08M4_RS12635 PF13580 SIS domain K08M4_RS12640 PF04972 BON domain K08M4_RS12645 PF04386 Stringent starvation protein B K08M4_RS12650 PF02798 Glutathione S-transferase, N-terminal domain K08M4_RS12650 PF00043 Glutathione S-transferase, C-terminal domain K08M4_RS12655 PF02167 Cytochrome C1 family K08M4_RS12660 PF00033 Cytochrome b/b6/petB K08M4_RS12660 PF00032 Cytochrome b(C-terminal)/b6/petD K08M4_RS12665 PF00355 Rieske [2Fe-2S] domain K08M4_RS12665 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K08M4_RS12670 PF00380 Ribosomal protein S9/S16 K08M4_RS12675 PF00572 Ribosomal protein L13 K08M4_RS12680 PF03969 AFG1-like ATPase K08M4_RS12685 PF06295 Protein of unknown function (DUF1043) K08M4_RS12690 PF00595 PDZ domain K08M4_RS12695 PF13180 PDZ domain K08M4_RS12700 PF00521 DNA gyrase/topoisomerase IV, subunit A K08M4_RS12700 PF03989 DNA gyrase C-terminal domain, beta-propeller K08M4_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS12705 PF00986 DNA gyrase B subunit, carboxyl terminus K08M4_RS12705 PF00204 DNA gyrase B K08M4_RS12705 PF01751 Toprim domain K08M4_RS12710 PF05728 Uncharacterised protein family (UPF0227) K08M4_RS12715 PF00149 Calcineurin-like phosphoesterase K08M4_RS12720 PF06853 Protein of unknown function (DUF1249) K08M4_RS12725 PF00293 NUDIX domain K08M4_RS12730 PF02321 Outer membrane efflux protein K08M4_RS12735 PF00294 pfkB family carbohydrate kinase K08M4_RS12735 PF01467 Cytidylyltransferase-like K08M4_RS12740 PF08335 GlnD PII-uridylyltransferase K08M4_RS12740 PF03710 Glutamate-ammonia ligase adenylyltransferase K08M4_RS12745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS12745 PF00672 HAMP domain K08M4_RS12745 PF02743 Cache domain K08M4_RS12750 PF07885 Ion channel K08M4_RS12755 PF01928 CYTH domain K08M4_RS12760 PF01865 Protein of unknown function DUF47 K08M4_RS12765 PF01384 Phosphate transporter family K08M4_RS12770 PF08239 Bacterial SH3 domain K08M4_RS12780 PF13401 AAA domain K08M4_RS12780 PF01471 Putative peptidoglycan binding domain K08M4_RS12785 PF12627 Probable RNA and SrmB- binding site of polymerase A K08M4_RS12785 PF01966 HD domain K08M4_RS12785 PF01743 Poly A polymerase head domain K08M4_RS12790 PF02673 Bacitracin resistance protein BacA K08M4_RS12795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M4_RS12800 PF02152 Dihydroneopterin aldolase K08M4_RS12805 PF02660 Glycerol-3-phosphate acyltransferase K08M4_RS12810 PF12697 Alpha/beta hydrolase family K08M4_RS12815 PF00814 Glycoprotease family K08M4_RS12820 PF01165 Ribosomal protein S21 K08M4_RS12825 PF09424 Yqey-like protein K08M4_RS12830 PF08275 DNA primase catalytic core, N-terminal domain K08M4_RS12830 PF10410 DnaB-helicase binding domain of primase K08M4_RS12830 PF01807 CHC2 zinc finger K08M4_RS12830 PF08278 DNA primase DnaG DnaB-binding K08M4_RS12835 PF04545 Sigma-70, region 4 K08M4_RS12835 PF04542 Sigma-70 region 2 K08M4_RS12835 PF03979 Sigma-70 factor, region 1.1 K08M4_RS12835 PF04539 Sigma-70 region 3 K08M4_RS12835 PF00140 Sigma-70 factor, region 1.2 K08M4_RS12835 PF04546 Sigma-70, non-essential region K08M4_RS12845 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M4_RS12850 PF01380 SIS domain K08M4_RS12855 PF00455 DeoR C terminal sensor domain K08M4_RS12855 PF08220 DeoR-like helix-turn-helix domain K08M4_RS12860 PF00224 Pyruvate kinase, barrel domain K08M4_RS12860 PF02887 Pyruvate kinase, alpha/beta domain K08M4_RS12875 PF10369 Small subunit of acetolactate synthase K08M4_RS12880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M4_RS12880 PF00205 Thiamine pyrophosphate enzyme, central domain K08M4_RS12880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M4_RS12885 PF00501 AMP-binding enzyme K08M4_RS12890 PF03466 LysR substrate binding domain K08M4_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS12900 PF01569 PAP2 superfamily K08M4_RS12905 PF00873 AcrB/AcrD/AcrF family K08M4_RS12920 PF08502 LeuA allosteric (dimerisation) domain K08M4_RS12920 PF00682 HMGL-like K08M4_RS12925 PF00180 Isocitrate/isopropylmalate dehydrogenase K08M4_RS12930 PF00330 Aconitase family (aconitate hydratase) K08M4_RS12935 PF00694 Aconitase C-terminal domain K08M4_RS12950 PF00226 DnaJ domain K08M4_RS12950 PF05099 Tellurite resistance protein TerB K08M4_RS12955 PF03968 OstA-like protein K08M4_RS12955 PF04453 LPS transport system D K08M4_RS12960 PF00639 PPIC-type PPIASE domain K08M4_RS12960 PF09312 SurA N-terminal domain K08M4_RS12965 PF04166 Pyridoxal phosphate biosynthetic protein PdxA K08M4_RS12970 PF00398 Ribosomal RNA adenine dimethylase K08M4_RS12975 PF04379 ApaG domain K08M4_RS12980 PF00149 Calcineurin-like phosphoesterase K08M4_RS12985 PF00186 Dihydrofolate reductase K08M4_RS12990 PF12821 Threonine/Serine exporter, ThrE K08M4_RS12995 PF06738 Putative threonine/serine exporter K08M4_RS13000 PF01018 GTP1/OBG K08M4_RS13000 PF01926 50S ribosome-binding GTPase K08M4_RS13005 PF01016 Ribosomal L27 protein K08M4_RS13010 PF00829 Ribosomal prokaryotic L21 protein K08M4_RS13015 PF00348 Polyprenyl synthetase K08M4_RS13025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K08M4_RS13025 PF00056 lactate/malate dehydrogenase, NAD binding domain K08M4_RS13030 PF02863 Arginine repressor, C-terminal domain K08M4_RS13030 PF01316 Arginine repressor, DNA binding domain K08M4_RS13045 PF00582 Universal stress protein family K08M4_RS13050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_RS13050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_RS13055 PF00849 RNA pseudouridylate synthase K08M4_RS13065 PF00176 SNF2 family N-terminal domain K08M4_RS13065 PF00271 Helicase conserved C-terminal domain K08M4_RS13065 PF12137 RNA polymerase recycling family C-terminal K08M4_RS13065 PF18337 RapA N-terminal Tudor like domain K08M4_RS13065 PF18339 RapA N-terminal Tudor like domain 1 K08M4_RS13070 PF13638 PIN domain K08M4_RS13070 PF02562 PhoH-like protein K08M4_RS13075 PF01523 Putative modulator of DNA gyrase K08M4_RS13080 PF00795 Carbon-nitrogen hydrolase K08M4_RS13085 PF13502 AsmA-like C-terminal region K08M4_RS13085 PF13116 Protein of unknown function K08M4_RS13090 PF00575 S1 RNA binding domain K08M4_RS13090 PF10150 Ribonuclease E/G family K08M4_RS13095 PF02545 Maf-like protein K08M4_RS13100 PF04093 rod shape-determining protein MreD K08M4_RS13105 PF04085 rod shape-determining protein MreC K08M4_RS13140 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS13145 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS13155 PF00482 Type II secretion system (T2SS), protein F K08M4_RS13160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K08M4_RS13160 PF00437 Type II/IV secretion system protein K08M4_RS13170 PF01471 Putative peptidoglycan binding domain K08M4_RS13170 PF13401 AAA domain K08M4_RS13175 PF00263 Bacterial type II and III secretion system protein K08M4_RS13175 PF03958 Bacterial type II/III secretion system short domain K08M4_RS13195 PF00563 EAL domain K08M4_RS13195 PF17157 Gammaproteobacterial periplasmic sensor domain K08M4_RS13195 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS13200 PF00436 Single-strand binding protein family K08M4_RS13205 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS13210 PF00483 Nucleotidyl transferase K08M4_RS13215 PF00005 ABC transporter K08M4_RS13215 PF17755 UvrA DNA-binding domain K08M4_RS13215 PF17760 UvrA interaction domain K08M4_RS13225 PF00266 Aminotransferase class-V K08M4_RS13230 PF01842 ACT domain K08M4_RS13230 PF00696 Amino acid kinase family K08M4_RS13235 PF02607 B12 binding domain K08M4_RS13235 PF02965 Vitamin B12 dependent methionine synthase, activation domain K08M4_RS13235 PF02310 B12 binding domain K08M4_RS13235 PF00809 Pterin binding enzyme K08M4_RS13235 PF02574 Homocysteine S-methyltransferase K08M4_RS13240 PF00999 Sodium/hydrogen exchanger family K08M4_RS13260 PF01695 IstB-like ATP binding protein K08M4_RS13265 PF13358 DDE superfamily endonuclease K08M4_RS13360 PF01507 Phosphoadenosine phosphosulfate reductase family K08M4_RS13365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_RS13365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M4_RS13370 PF00667 FAD binding domain K08M4_RS13370 PF00258 Flavodoxin K08M4_RS13370 PF00175 Oxidoreductase NAD-binding domain K08M4_RS13385 PF09583 Phage shock protein G (Phageshock_PspG) K08M4_RS13390 PF01207 Dihydrouridine synthase (Dus) K08M4_RS13415 PF01475 Ferric uptake regulator family K08M4_RS13425 PF01609 Transposase DDE domain K08M4_RS13425 PF13006 Insertion element 4 transposase N-terminal K08M4_RS13430 PF00342 Phosphoglucose isomerase K08M4_RS13435 PF01894 Uncharacterised protein family UPF0047 K08M4_RS13445 PF01168 Alanine racemase, N-terminal domain K08M4_RS13445 PF00842 Alanine racemase, C-terminal domain K08M4_RS13450 PF03796 DnaB-like helicase C terminal domain K08M4_RS13450 PF00772 DnaB-like helicase N terminal domain K08M4_RS13460 PF03948 Ribosomal protein L9, C-terminal domain K08M4_RS13460 PF01281 Ribosomal protein L9, N-terminal domain K08M4_RS13465 PF01084 Ribosomal protein S18 K08M4_RS13470 PF01250 Ribosomal protein S6 K08M4_RS13475 PF00588 SpoU rRNA Methylase family K08M4_RS13475 PF08032 RNA 2'-O ribose methyltransferase substrate binding K08M4_RS13480 PF00575 S1 RNA binding domain K08M4_RS13480 PF08206 Ribonuclease B OB domain K08M4_RS13480 PF08461 Ribonuclease R winged-helix domain K08M4_RS13480 PF00773 RNB domain K08M4_RS13480 PF17876 Cold shock domain K08M4_RS13485 PF01979 Amidohydrolase family K08M4_RS13490 PF08238 Sel1 repeat K08M4_RS13500 PF00709 Adenylosuccinate synthetase K08M4_RS13505 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) K08M4_RS13510 PF01145 SPFH domain / Band 7 family K08M4_RS13515 PF12221 Bacterial membrane protein N terminal K08M4_RS13515 PF01145 SPFH domain / Band 7 family K08M4_RS13520 PF16360 GTP-binding GTPase Middle Region K08M4_RS13520 PF13167 GTP-binding GTPase N-terminal K08M4_RS13520 PF01926 50S ribosome-binding GTPase K08M4_RS13525 PF17209 Hfq protein K08M4_RS13535 PF08676 MutL C terminal dimerisation domain K08M4_RS13535 PF01119 DNA mismatch repair protein, C-terminal domain K08M4_RS13540 PF01520 N-acetylmuramoyl-L-alanine amidase K08M4_RS13545 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE K08M4_RS13550 PF08331 Domain of unknown function (DUF1730) K08M4_RS13630 PF00929 Exonuclease K08M4_RS13635 PF03193 RsgA GTPase K08M4_RS13640 PF02666 Phosphatidylserine decarboxylase K08M4_RS13650 PF02080 TrkA-C domain K08M4_RS13650 PF03600 Citrate transporter K08M4_RS13655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS13655 PF00672 HAMP domain K08M4_RS13655 PF02743 Cache domain K08M4_RS13665 PF00152 tRNA synthetases class II (D, K and N) K08M4_RS13670 PF00890 FAD binding domain K08M4_RS13670 PF02910 Fumarate reductase flavoprotein C-term K08M4_RS13675 PF13183 4Fe-4S dicluster domain K08M4_RS13675 PF13085 2Fe-2S iron-sulfur cluster binding domain K08M4_RS13680 PF02300 Fumarate reductase subunit C K08M4_RS13685 PF02313 Fumarate reductase subunit D K08M4_RS13690 PF09285 Elongation factor P, C-terminal K08M4_RS13690 PF08207 Elongation factor P (EF-P) KOW-like domain K08M4_RS13690 PF01132 Elongation factor P (EF-P) OB domain K08M4_RS13695 PF04055 Radical SAM superfamily K08M4_RS13700 PF02308 MgtC family K08M4_RS13705 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS13715 PF00118 TCP-1/cpn60 chaperonin family K08M4_RS13720 PF00166 Chaperonin 10 Kd subunit K08M4_RS13730 PF01554 MatE K08M4_RS13735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M4_RS13735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K08M4_RS13740 PF01676 Metalloenzyme superfamily K08M4_RS13740 PF06415 BPG-independent PGAM N-terminus (iPGM_N) K08M4_RS13745 PF02397 Bacterial sugar transferase K08M4_RS13750 PF01370 NAD dependent epimerase/dehydratase family K08M4_RS13755 PF02719 Polysaccharide biosynthesis protein K08M4_RS13800 PF00535 Glycosyl transferase family 2 K08M4_RS13805 PF04138 GtrA-like protein K08M4_RS13810 PF00483 Nucleotidyl transferase K08M4_RS13825 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_RS13835 PF01061 ABC-2 type transporter K08M4_RS13840 PF00005 ABC transporter K08M4_RS13870 PF00534 Glycosyl transferases group 1 K08M4_RS13870 PF13439 Glycosyltransferase Family 4 K08M4_RS13875 PF00581 Rhodanese-like domain K08M4_RS13880 PF02556 Preprotein translocase subunit SecB K08M4_RS13885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K08M4_RS13885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K08M4_RS13895 PF06426 Serine acetyltransferase, N-terminal K08M4_RS13895 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS13900 PF01551 Peptidase family M23 K08M4_RS13905 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS13905 PF08360 QacR-like protein, C-terminal region K08M4_RS13910 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase K08M4_RS13915 PF04321 RmlD substrate binding domain K08M4_RS13920 PF00483 Nucleotidyl transferase K08M4_RS13925 PF16363 GDP-mannose 4,6 dehydratase K08M4_RS13930 PF01370 NAD dependent epimerase/dehydratase family K08M4_RS13935 PF03279 Bacterial lipid A biosynthesis acyltransferase K08M4_RS13940 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS13955 PF01467 Cytidylyltransferase-like K08M4_RS13960 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K08M4_RS13985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K08M4_RS13990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K08M4_RS13995 PF05686 Glycosyl transferase family 90 K08M4_RS14000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain K08M4_RS14000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain K08M4_RS14000 PF06827 Zinc finger found in FPG and IleRS K08M4_RS14010 PF00471 Ribosomal protein L33 K08M4_RS14015 PF00830 Ribosomal L28 family K08M4_RS14020 PF04002 RadC-like JAB domain K08M4_RS14025 PF04127 DNA / pantothenate metabolism flavoprotein K08M4_RS14025 PF02441 Flavoprotein K08M4_RS14030 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS14035 PF03279 Bacterial lipid A biosynthesis acyltransferase K08M4_RS14040 PF00156 Phosphoribosyl transferase domain K08M4_RS14045 PF03725 3' exoribonuclease family, domain 2 K08M4_RS14045 PF01138 3' exoribonuclease family, domain 1 K08M4_RS14050 PF03755 YicC-like family, N-terminal region K08M4_RS14050 PF08340 Domain of unknown function (DUF1732) K08M4_RS14055 PF00313 'Cold-shock' DNA-binding domain K08M4_RS14060 PF00455 DeoR C terminal sensor domain K08M4_RS14060 PF08220 DeoR-like helix-turn-helix domain K08M4_RS14075 PF00465 Iron-containing alcohol dehydrogenase K08M4_RS14080 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS14085 PF00923 Transaldolase/Fructose-6-phosphate aldolase K08M4_RS14090 PF02780 Transketolase, C-terminal domain K08M4_RS14090 PF02779 Transketolase, pyrimidine binding domain K08M4_RS14090 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_RS14095 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K08M4_RS14100 PF01546 Peptidase family M20/M25/M40 K08M4_RS14105 PF00367 phosphotransferase system, EIIB K08M4_RS14105 PF02378 Phosphotransferase system, EIIC K08M4_RS14120 PF00860 Permease family K08M4_RS14125 PF00625 Guanylate kinase K08M4_RS14130 PF01192 RNA polymerase Rpb6 K08M4_RS14135 PF13291 ACT domain K08M4_RS14135 PF04607 Region found in RelA / SpoT proteins K08M4_RS14135 PF02824 TGS domain K08M4_RS14140 PF00270 DEAD/DEAH box helicase K08M4_RS14140 PF17191 RecG wedge domain K08M4_RS14140 PF00271 Helicase conserved C-terminal domain K08M4_RS14145 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS14145 PF00672 HAMP domain K08M4_RS14150 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS14150 PF00072 Response regulator receiver domain K08M4_RS14155 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M4_RS14155 PF03449 Transcription elongation factor, N-terminal K08M4_RS14160 PF09371 Tex-like protein N-terminal domain K08M4_RS14160 PF16921 Tex protein YqgF-like domain K08M4_RS14160 PF00575 S1 RNA binding domain K08M4_RS14160 PF17674 HHH domain K08M4_RS14170 PF00561 alpha/beta hydrolase fold K08M4_RS14175 PF00156 Phosphoribosyl transferase domain K08M4_RS14180 PF01106 NifU-like domain K08M4_RS14180 PF01521 Iron-sulphur cluster biosynthesis K08M4_RS14185 PF00293 NUDIX domain K08M4_RS14190 PF00459 Inositol monophosphatase family K08M4_RS14195 PF01203 Type II secretion system (T2SS), protein N K08M4_RS14200 PF04612 Type II secretion system (T2SS), protein M K08M4_RS14205 PF05134 Type II secretion system (T2SS), protein L K08M4_RS14205 PF12693 GspL periplasmic domain K08M4_RS14210 PF03934 Type II secretion system (T2SS), protein K K08M4_RS14215 PF11612 Type II secretion system (T2SS), protein J K08M4_RS14215 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS14220 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS14220 PF02501 Type II secretion system (T2SS), protein I K08M4_RS14225 PF12019 Type II transport protein GspH K08M4_RS14230 PF07963 Prokaryotic N-terminal methylation motif K08M4_RS14230 PF08334 Type II secretion system (T2SS), protein G K08M4_RS14235 PF00482 Type II secretion system (T2SS), protein F K08M4_RS14240 PF00437 Type II/IV secretion system protein K08M4_RS14245 PF00263 Bacterial type II and III secretion system protein K08M4_RS14245 PF03958 Bacterial type II/III secretion system short domain K08M4_RS14250 PF11356 Type II secretion system protein C K08M4_RS14255 PF01479 S4 domain K08M4_RS14260 PF01430 Hsp33 protein K08M4_RS14265 PF01293 Phosphoenolpyruvate carboxykinase K08M4_RS14275 PF00583 Acetyltransferase (GNAT) family K08M4_RS14275 PF09500 Putative thioesterase (yiiD_Cterm) K08M4_RS14280 PF02580 D-Tyr-tRNA(Tyr) deacylase K08M4_RS14285 PF03631 Virulence factor BrkB K08M4_RS14295 PF00308 Bacterial dnaA protein K08M4_RS14295 PF08299 Bacterial dnaA protein helix-turn-helix K08M4_RS14300 PF03144 Elongation factor Tu domain 2 K08M4_RS14300 PF00679 Elongation factor G C-terminus K08M4_RS14300 PF00009 Elongation factor Tu GTP binding domain K08M4_RS14310 PF00120 Glutamine synthetase, catalytic domain K08M4_RS14310 PF03951 Glutamine synthetase, beta-Grasp domain K08M4_RS14320 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS14320 PF00989 PAS fold K08M4_RS14325 PF00158 Sigma-54 interaction domain K08M4_RS14325 PF00072 Response regulator receiver domain K08M4_RS14325 PF02954 Bacterial regulatory protein, Fis family K08M4_RS14330 PF00563 EAL domain K08M4_RS14330 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS14330 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS14335 PF06969 HemN C-terminal domain K08M4_RS14335 PF04055 Radical SAM superfamily K08M4_RS14340 PF10675 Protein of unknown function (DUF2489) K08M4_RS14345 PF04220 Der GTPase activator (YihI) K08M4_RS14355 PF00034 Cytochrome c K08M4_RS14360 PF01926 50S ribosome-binding GTPase K08M4_RS14370 PF01367 5'-3' exonuclease, C-terminal SAM fold K08M4_RS14370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K08M4_RS14370 PF01612 3'-5' exonuclease K08M4_RS14370 PF00476 DNA polymerase family A K08M4_RS14380 PF00490 Delta-aminolevulinic acid dehydratase K08M4_RS14385 PF01026 TatD related DNase K08M4_RS14390 PF00902 Sec-independent protein translocase protein (TatC) K08M4_RS14395 PF02416 mttA/Hcf106 family K08M4_RS14400 PF02416 mttA/Hcf106 family K08M4_RS14405 PF03109 ABC1 family K08M4_RS14410 PF02036 SCP-2 sterol transfer family K08M4_RS14415 PF01209 ubiE/COQ5 methyltransferase family K08M4_RS14420 PF02646 RmuC family K08M4_RS14445 PF01420 Type I restriction modification DNA specificity domain K08M4_RS14450 PF02384 N-6 DNA Methylase K08M4_RS14455 PF18766 SWI2/SNF2 ATPase K08M4_RS14455 PF12008 Type I restriction and modification enzyme - subunit R C terminal K08M4_RS14455 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) K08M4_RS14515 PF10625 Universal stress protein B (UspB) K08M4_RS14520 PF00210 Ferritin-like domain K08M4_RS14525 PF00582 Universal stress protein family K08M4_RS14530 PF00892 EamA-like transporter family K08M4_RS14540 PF04445 Putative SAM-dependent methyltransferase K08M4_RS14545 PF08448 PAS fold K08M4_RS14545 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS14545 PF00563 EAL domain K08M4_RS14550 PF01037 Lrp/AsnC ligand binding domain K08M4_RS14555 PF01432 Peptidase family M3 K08M4_RS14560 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ K08M4_RS14565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_RS14565 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS14580 PF03116 NQR2, RnfD, RnfE family K08M4_RS14595 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS14595 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M4_RS14600 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS14605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS14610 PF00005 ABC transporter K08M4_RS14610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS14640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M4_RS14645 PF00580 UvrD/REP helicase N-terminal domain K08M4_RS14645 PF13361 UvrD-like helicase C-terminal domain K08M4_RS14650 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS14655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS14660 PF00873 AcrB/AcrD/AcrF family K08M4_RS14665 PF04380 Membrane fusogenic activity K08M4_RS14670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain K08M4_RS14670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain K08M4_RS14675 PF03466 LysR substrate binding domain K08M4_RS14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS14685 PF13358 DDE superfamily endonuclease K08M4_RS14735 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS14740 PF07369 Protein of unknown function (DUF1488) K08M4_RS14745 PF01488 Shikimate / quinate 5-dehydrogenase K08M4_RS14745 PF08501 Shikimate dehydrogenase substrate binding domain K08M4_RS14745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain K08M4_RS14750 PF01218 Coproporphyrinogen III oxidase K08M4_RS14755 PF01300 Telomere recombination K08M4_RS14760 PF00731 AIR carboxylase K08M4_RS14765 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain K08M4_RS14765 PF02222 ATP-grasp domain K08M4_RS14770 PF01396 Topoisomerase DNA binding C4 zinc finger K08M4_RS14775 PF04361 Protein of unknown function (DUF494) K08M4_RS14780 PF02481 DNA recombination-mediator protein A K08M4_RS14780 PF17782 DprA winged helix domain K08M4_RS14790 PF01327 Polypeptide deformylase K08M4_RS14795 PF00551 Formyl transferase K08M4_RS14795 PF02911 Formyl transferase, C-terminal domain K08M4_RS14800 PF01029 NusB family K08M4_RS14800 PF01189 16S rRNA methyltransferase RsmB/F K08M4_RS14805 PF02080 TrkA-C domain K08M4_RS14805 PF02254 TrkA-N domain K08M4_RS14810 PF02386 Cation transport protein K08M4_RS14820 PF03006 Haemolysin-III related K08M4_RS14825 PF07070 SpoOM protein K08M4_RS14835 PF06288 Protein of unknown function (DUF1040) K08M4_RS14840 PF12801 4Fe-4S binding domain K08M4_RS14840 PF13746 4Fe-4S dicluster domain K08M4_RS14840 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase K08M4_RS14845 PF01636 Phosphotransferase enzyme family K08M4_RS14850 PF01323 DSBA-like thioredoxin domain K08M4_RS14860 PF01078 Magnesium chelatase, subunit ChlI K08M4_RS14860 PF13335 Magnesium chelatase, subunit ChlI C-terminal K08M4_RS14865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M4_RS14865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M4_RS14865 PF00205 Thiamine pyrophosphate enzyme, central domain K08M4_RS14875 PF01063 Amino-transferase class IV K08M4_RS14880 PF00920 Dehydratase family K08M4_RS14885 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_RS14885 PF00585 C-terminal regulatory domain of Threonine dehydratase K08M4_RS14890 PF03466 LysR substrate binding domain K08M4_RS14890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS14895 PF07690 Major Facilitator Superfamily K08M4_RS14900 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS14900 PF12804 MobA-like NTP transferase domain K08M4_RS14905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K08M4_RS14905 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain K08M4_RS14910 PF02874 ATP synthase alpha/beta family, beta-barrel domain K08M4_RS14910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_RS14915 PF00231 ATP synthase K08M4_RS14920 PF00306 ATP synthase alpha/beta chain, C terminal domain K08M4_RS14920 PF02874 ATP synthase alpha/beta family, beta-barrel domain K08M4_RS14920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_RS14925 PF00213 ATP synthase delta (OSCP) subunit K08M4_RS14930 PF00430 ATP synthase B/B' CF(0) K08M4_RS14935 PF00137 ATP synthase subunit C K08M4_RS14940 PF00119 ATP synthase A chain K08M4_RS14945 PF03899 ATP synthase I chain K08M4_RS14950 PF02195 ParB-like nuclease domain K08M4_RS14950 PF17762 HTH domain found in ParB protein K08M4_RS14955 PF13614 AAA domain K08M4_RS14960 PF02527 rRNA small subunit methyltransferase G K08M4_RS14965 PF01134 Glucose inhibited division protein A K08M4_RS14965 PF13932 GidA associated domain K08M4_RS14975 PF00258 Flavodoxin K08M4_RS14980 PF01926 50S ribosome-binding GTPase K08M4_RS14980 PF10396 GTP-binding protein TrmE N-terminus K08M4_RS14980 PF12631 MnmE helical domain K08M4_RS14985 PF14849 YidC periplasmic domain K08M4_RS14985 PF02096 60Kd inner membrane protein K08M4_RS14990 PF01809 Putative membrane protein insertion efficiency factor K08M4_RS14995 PF00825 Ribonuclease P K08M4_RS15000 PF00468 Ribosomal protein L34 K08M4_RS15005 PF00005 ABC transporter K08M4_RS15010 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS15015 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS15020 PF18607 ParA helix turn helix domain K08M4_RS15020 PF13614 AAA domain K08M4_RS15025 PF08775 ParB family K08M4_RS15025 PF02195 ParB-like nuclease domain K08M4_RS15030 PF13718 GNAT acetyltransferase 2 K08M4_RS15030 PF05127 Helicase K08M4_RS15045 PF00884 Sulfatase K08M4_RS15045 PF08019 Phosphoethanolamine transferase EptA/EptB K08M4_RS15050 PF01544 CorA-like Mg2+ transporter protein K08M4_RS15080 PF00664 ABC transporter transmembrane region K08M4_RS15080 PF00005 ABC transporter K08M4_RS15085 PF04286 Protein of unknown function (DUF445) K08M4_RS15090 PF01037 Lrp/AsnC ligand binding domain K08M4_RS15105 PF00474 Sodium:solute symporter family K08M4_RS15115 PF14850 DNA-binding domain of Proline dehydrogenase K08M4_RS15115 PF18327 Proline utilization A proline dehydrogenase N-terminal domain K08M4_RS15115 PF01619 Proline dehydrogenase K08M4_RS15115 PF00171 Aldehyde dehydrogenase family K08M4_RS15120 PF12833 Helix-turn-helix domain K08M4_RS15130 PF03781 Sulfatase-modifying factor enzyme 1 K08M4_RS15135 PF00072 Response regulator receiver domain K08M4_RS15135 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS15140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region K08M4_RS15140 PF01243 Pyridoxamine 5'-phosphate oxidase K08M4_RS15145 PF02743 Cache domain K08M4_RS15145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS15145 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS15150 PF02954 Bacterial regulatory protein, Fis family K08M4_RS15150 PF00072 Response regulator receiver domain K08M4_RS15150 PF00158 Sigma-54 interaction domain K08M4_RS15155 PF00529 HlyD membrane-fusion protein of T1SS K08M4_RS15170 PF00005 ABC transporter K08M4_RS15170 PF00664 ABC transporter transmembrane region K08M4_RS15170 PF03412 Peptidase C39 family K08M4_RS15175 PF06291 Bor protein K08M4_RS15180 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS15180 PF00672 HAMP domain K08M4_RS15185 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS15185 PF00072 Response regulator receiver domain K08M4_RS15195 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS15195 PF13977 BetI-type transcriptional repressor, C-terminal K08M4_RS15200 PF00171 Aldehyde dehydrogenase family K08M4_RS15205 PF00732 GMC oxidoreductase K08M4_RS15205 PF05199 GMC oxidoreductase K08M4_RS15210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K08M4_RS15215 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS15220 PF00571 CBS domain K08M4_RS15220 PF00005 ABC transporter K08M4_RS15225 PF01047 MarR family K08M4_RS15240 PF00583 Acetyltransferase (GNAT) family K08M4_RS15245 PF00202 Aminotransferase class-III K08M4_RS15250 PF06339 Ectoine synthase K08M4_RS15255 PF13840 ACT domain K08M4_RS15255 PF00696 Amino acid kinase family K08M4_RS15260 PF01590 GAF domain K08M4_RS15260 PF00158 Sigma-54 interaction domain K08M4_RS15260 PF02954 Bacterial regulatory protein, Fis family K08M4_RS15285 PF00781 Diacylglycerol kinase catalytic domain K08M4_RS15285 PF02142 MGS-like domain K08M4_RS15290 PF00924 Mechanosensitive ion channel K08M4_RS15320 PF01594 AI-2E family transporter K08M4_RS15330 PF02600 Disulfide bond formation protein DsbB K08M4_RS15335 PF01081 KDPG and KHG aldolase K08M4_RS15340 PF00294 pfkB family carbohydrate kinase K08M4_RS15345 PF00367 phosphotransferase system, EIIB K08M4_RS15345 PF02378 Phosphotransferase system, EIIC K08M4_RS15350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K08M4_RS15350 PF13378 Enolase C-terminal domain-like K08M4_RS15360 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS15360 PF07702 UTRA domain K08M4_RS15370 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_RS15370 PF12464 Maltose acetyltransferase K08M4_RS15375 PF00962 Adenosine/AMP deaminase K08M4_RS15380 PF03466 LysR substrate binding domain K08M4_RS15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS15385 PF12833 Helix-turn-helix domain K08M4_RS15385 PF02311 AraC-like ligand binding domain K08M4_RS15390 PF07690 Major Facilitator Superfamily K08M4_RS15405 PF02574 Homocysteine S-methyltransferase K08M4_RS15405 PF02310 B12 binding domain K08M4_RS15405 PF02607 B12 binding domain K08M4_RS15405 PF02965 Vitamin B12 dependent methionine synthase, activation domain K08M4_RS15405 PF00809 Pterin binding enzyme K08M4_RS15410 PF01548 Transposase K08M4_RS15410 PF02371 Transposase IS116/IS110/IS902 family K08M4_RS15425 PF00753 Metallo-beta-lactamase superfamily K08M4_RS15425 PF14864 Alkyl sulfatase C-terminal K08M4_RS15425 PF14863 Alkyl sulfatase dimerisation K08M4_RS15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS15430 PF03466 LysR substrate binding domain K08M4_RS15440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_RS15445 PF00232 Glycosyl hydrolase family 1 K08M4_RS15450 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS15455 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_RS15455 PF12464 Maltose acetyltransferase K08M4_RS15460 PF07690 Major Facilitator Superfamily K08M4_RS15465 PF03466 LysR substrate binding domain K08M4_RS15465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS15475 PF01872 RibD C-terminal domain K08M4_RS15485 PF13091 PLD-like domain K08M4_RS15490 PF00881 Nitroreductase family K08M4_RS15505 PF04055 Radical SAM superfamily K08M4_RS15520 PF16901 C-terminal domain of alpha-glycerophosphate oxidase K08M4_RS15520 PF01266 FAD dependent oxidoreductase K08M4_RS15525 PF00455 DeoR C terminal sensor domain K08M4_RS15525 PF08220 DeoR-like helix-turn-helix domain K08M4_RS15530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K08M4_RS15530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K08M4_RS15535 PF00230 Major intrinsic protein K08M4_RS15540 PF00664 ABC transporter transmembrane region K08M4_RS15540 PF00005 ABC transporter K08M4_RS15540 PF03412 Peptidase C39 family K08M4_RS15550 PF03412 Peptidase C39 family K08M4_RS15550 PF00005 ABC transporter K08M4_RS15550 PF00664 ABC transporter transmembrane region K08M4_RS15560 PF02794 RTX toxin acyltransferase family K08M4_RS15565 PF16671 Actin cross-linking domain K08M4_RS15565 PF11647 Membrane Localization Domain K08M4_RS15565 PF11713 Peptidase C80 family K08M4_RS15565 PF07634 RtxA repeat K08M4_RS15565 PF12146 Serine aminopeptidase, S33 K08M4_RS15575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS15575 PF03466 LysR substrate binding domain K08M4_RS15580 PF01758 Sodium Bile acid symporter family K08M4_RS15595 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS15615 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS15615 PF00589 Phage integrase family K08M4_RS15625 PF06224 Winged helix DNA-binding domain K08M4_RS15655 PF00455 DeoR C terminal sensor domain K08M4_RS15655 PF08220 DeoR-like helix-turn-helix domain K08M4_RS15660 PF03611 PTS system sugar-specific permease component K08M4_RS15665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_RS15670 PF00596 Class II Aldolase and Adducin N-terminal domain K08M4_RS15680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K08M4_RS15685 PF01261 Xylose isomerase-like TIM barrel K08M4_RS15695 PF02595 Glycerate kinase family K08M4_RS15700 PF00199 Catalase K08M4_RS15700 PF06628 Catalase-related immune-responsive K08M4_RS15705 PF01734 Patatin-like phospholipase K08M4_RS15710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_RS15710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_RS15720 PF00970 Oxidoreductase FAD-binding domain K08M4_RS15720 PF00175 Oxidoreductase NAD-binding domain K08M4_RS15725 PF01553 Acyltransferase K08M4_RS15730 PF04816 tRNA (adenine(22)-N(1))-methyltransferase K08M4_RS15740 PF00128 Alpha amylase, catalytic domain K08M4_RS15740 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M4_RS15745 PF02264 LamB porin K08M4_RS15765 PF01547 Bacterial extracellular solute-binding protein K08M4_RS15770 PF00128 Alpha amylase, catalytic domain K08M4_RS15770 PF16657 Maltogenic Amylase, C-terminal domain K08M4_RS15775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS15775 PF03466 LysR substrate binding domain K08M4_RS15805 PF16657 Maltogenic Amylase, C-terminal domain K08M4_RS15805 PF00128 Alpha amylase, catalytic domain K08M4_RS15805 PF02903 Alpha amylase, N-terminal ig-like domain K08M4_RS15810 PF18494 Pullulanase Ins domain K08M4_RS15810 PF17967 Pullulanase N2 domain K08M4_RS15810 PF03714 Bacterial pullanase-associated domain K08M4_RS15810 PF11852 Domain of unknown function (DUF3372) K08M4_RS15810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M4_RS15820 PF01810 LysE type translocator K08M4_RS15825 PF01037 Lrp/AsnC ligand binding domain K08M4_RS15830 PF03466 LysR substrate binding domain K08M4_RS15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS15840 PF00375 Sodium:dicarboxylate symporter family K08M4_RS15845 PF03193 RsgA GTPase K08M4_RS15855 PF02630 SCO1/SenC K08M4_RS15870 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS15870 PF17874 MalT-like TPR region K08M4_RS15875 PF00343 Carbohydrate phosphorylase K08M4_RS15880 PF02446 4-alpha-glucanotransferase K08M4_RS15885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M4_RS15885 PF00128 Alpha amylase, catalytic domain K08M4_RS15885 PF02806 Alpha amylase, C-terminal all-beta domain K08M4_RS15895 PF00005 ABC transporter K08M4_RS15895 PF12558 ATP-binding cassette cobalt transporter K08M4_RS15900 PF07155 ECF-type riboflavin transporter, S component K08M4_RS15905 PF00529 HlyD membrane-fusion protein of T1SS K08M4_RS15905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS15910 PF11742 Protein of unknown function (DUF3302) K08M4_RS15920 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS15935 PF01048 Phosphorylase superfamily K08M4_RS15940 PF01476 LysM domain K08M4_RS15940 PF03734 L,D-transpeptidase catalytic domain K08M4_RS15940 PF17969 L,D-transpeptidase C-terminal domain K08M4_RS15950 PF00270 DEAD/DEAH box helicase K08M4_RS15950 PF00271 Helicase conserved C-terminal domain K08M4_RS15955 PF00657 GDSL-like Lipase/Acylhydrolase K08M4_RS15960 PF00561 alpha/beta hydrolase fold K08M4_RS15965 PF03280 Proteobacterial lipase chaperone protein K08M4_RS15970 PF17200 Single Cache domain 2 K08M4_RS15970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS15970 PF00672 HAMP domain K08M4_RS15975 PF12849 PBP superfamily domain K08M4_RS15980 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS15985 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS15990 PF00005 ABC transporter K08M4_RS15995 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS16005 PF07584 Aerotolerance regulator N-terminal K08M4_RS16005 PF00092 von Willebrand factor type A domain K08M4_RS16010 PF00092 von Willebrand factor type A domain K08M4_RS16010 PF07584 Aerotolerance regulator N-terminal K08M4_RS16020 PF01882 Protein of unknown function DUF58 K08M4_RS16025 PF17863 AAA lid domain K08M4_RS16025 PF07726 ATPase family associated with various cellular activities (AAA) K08M4_RS16030 PF00672 HAMP domain K08M4_RS16030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS16030 PF02743 Cache domain K08M4_RS16040 PF13006 Insertion element 4 transposase N-terminal K08M4_RS16040 PF01609 Transposase DDE domain K08M4_RS16045 PF00005 ABC transporter K08M4_RS16045 PF08402 TOBE domain K08M4_RS16050 PF01547 Bacterial extracellular solute-binding protein K08M4_RS16055 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS16055 PF14785 Maltose transport system permease protein MalF P2 domain K08M4_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS16075 PF01609 Transposase DDE domain K08M4_RS16075 PF13006 Insertion element 4 transposase N-terminal K08M4_RS16100 PF02355 Protein export membrane protein K08M4_RS16100 PF13721 SecD export protein N-terminal TM region K08M4_RS16100 PF07549 SecD/SecF GG Motif K08M4_RS16105 PF07549 SecD/SecF GG Motif K08M4_RS16105 PF02355 Protein export membrane protein K08M4_RS16115 PF00924 Mechanosensitive ion channel K08M4_RS16125 PF00873 AcrB/AcrD/AcrF family K08M4_RS16130 PF01914 MarC family integral membrane protein K08M4_RS16135 PF03448 MgtE intracellular N domain K08M4_RS16135 PF01769 Divalent cation transporter K08M4_RS16135 PF00571 CBS domain K08M4_RS16145 PF01699 Sodium/calcium exchanger protein K08M4_RS16150 PF03466 LysR substrate binding domain K08M4_RS16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS16160 PF12704 MacB-like periplasmic core domain K08M4_RS16160 PF02687 FtsX-like permease family K08M4_RS16165 PF00005 ABC transporter K08M4_RS16190 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS16205 PF00072 Response regulator receiver domain K08M4_RS16205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS16210 PF17327 Acyl homoserine lactone synthase K08M4_RS16225 PF00463 Isocitrate lyase family K08M4_RS16230 PF03466 LysR substrate binding domain K08M4_RS16230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS16235 PF01274 Malate synthase K08M4_RS16240 PF00171 Aldehyde dehydrogenase family K08M4_RS16255 PF02028 BCCT, betaine/carnitine/choline family transporter K08M4_RS16265 PF05661 Protein of unknown function (DUF808) K08M4_RS16270 PF01979 Amidohydrolase family K08M4_RS16280 PF03476 MOSC N-terminal beta barrel domain K08M4_RS16280 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_RS16280 PF03473 MOSC domain K08M4_RS16285 PF02540 NAD synthase K08M4_RS16290 PF01467 Cytidylyltransferase-like K08M4_RS16335 PF00005 ABC transporter K08M4_RS16340 PF01032 FecCD transport family K08M4_RS16350 PF02472 Biopolymer transport protein ExbD/TolR K08M4_RS16355 PF01618 MotA/TolQ/ExbB proton channel family K08M4_RS16360 PF03544 Gram-negative bacterial TonB protein C-terminal K08M4_RS16365 PF04055 Radical SAM superfamily K08M4_RS16370 PF06228 Haem utilisation ChuX/HutX K08M4_RS16375 PF01243 Pyridoxamine 5'-phosphate oxidase K08M4_RS16380 PF01584 CheW-like domain K08M4_RS16380 PF00072 Response regulator receiver domain K08M4_RS16390 PF00128 Alpha amylase, catalytic domain K08M4_RS16395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS16395 PF00672 HAMP domain K08M4_RS16395 PF02743 Cache domain K08M4_RS16400 PF07670 Nucleoside recognition K08M4_RS16425 PF08525 Opacity-associated protein A N-terminal motif K08M4_RS16425 PF01476 LysM domain K08M4_RS16425 PF01551 Peptidase family M23 K08M4_RS16430 PF08448 PAS fold K08M4_RS16430 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS16430 PF08447 PAS fold K08M4_RS16430 PF00563 EAL domain K08M4_RS16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS16435 PF03466 LysR substrate binding domain K08M4_RS16440 PF07690 Major Facilitator Superfamily K08M4_RS16465 PF00462 Glutaredoxin K08M4_RS16470 PF00892 EamA-like transporter family K08M4_RS16475 PF13609 Gram-negative porin K08M4_RS16485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_RS16490 PF03611 PTS system sugar-specific permease component K08M4_RS16495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_RS16510 PF01773 Na+ dependent nucleoside transporter N-terminus K08M4_RS16510 PF07662 Na+ dependent nucleoside transporter C-terminus K08M4_RS16510 PF07670 Nucleoside recognition K08M4_RS16530 PF00563 EAL domain K08M4_RS16530 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS16530 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS16535 PF00271 Helicase conserved C-terminal domain K08M4_RS16535 PF00270 DEAD/DEAH box helicase K08M4_RS16550 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS16555 PF00313 'Cold-shock' DNA-binding domain K08M4_RS16560 PF07969 Amidohydrolase family K08M4_RS16580 PF12833 Helix-turn-helix domain K08M4_RS16585 PF03253 Urea transporter K08M4_RS16595 PF00155 Aminotransferase class I and II K08M4_RS16595 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS16600 PF13520 Amino acid permease K08M4_RS16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS16610 PF03466 LysR substrate binding domain K08M4_RS16615 PF01810 LysE type translocator K08M4_RS16630 PF03063 Prismane/CO dehydrogenase family K08M4_RS16635 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_RS16635 PF00175 Oxidoreductase NAD-binding domain K08M4_RS16635 PF00970 Oxidoreductase FAD-binding domain K08M4_RS16640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_RS16640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_RS16645 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS16645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K08M4_RS16645 PF00672 HAMP domain K08M4_RS16645 PF00072 Response regulator receiver domain K08M4_RS16645 PF01627 Hpt domain K08M4_RS16650 PF04363 Protein of unknown function (DUF496) K08M4_RS16660 PF04337 Protein of unknown function, DUF480 K08M4_RS16665 PF01541 GIY-YIG catalytic domain K08M4_RS16670 PF13407 Periplasmic binding protein domain K08M4_RS16675 PF09308 LuxQ, periplasmic K08M4_RS16675 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS16675 PF00072 Response regulator receiver domain K08M4_RS16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS16695 PF00012 Hsp70 protein K08M4_RS16705 PF01557 Fumarylacetoacetate (FAA) hydrolase family K08M4_RS16710 PF01810 LysE type translocator K08M4_RS16715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_RS16715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_RS16715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_RS16715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_RS16720 PF02790 Cytochrome C oxidase subunit II, transmembrane domain K08M4_RS16720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K08M4_RS16725 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M4_RS16730 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 K08M4_RS16735 PF00510 Cytochrome c oxidase subunit III K08M4_RS16755 PF02628 Cytochrome oxidase assembly protein K08M4_RS16760 PF01040 UbiA prenyltransferase family K08M4_RS16775 PF12843 Putative quorum-sensing-regulated virulence factor K08M4_RS16795 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system K08M4_RS16800 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA K08M4_RS16835 PF00793 DAHP synthetase I family K08M4_RS16840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_RS16840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_RS16840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_RS16840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_RS16845 PF01050 Mannose-6-phosphate isomerase K08M4_RS16845 PF00483 Nucleotidyl transferase K08M4_RS16850 PF00924 Mechanosensitive ion channel K08M4_RS16855 PF02080 TrkA-C domain K08M4_RS16855 PF02254 TrkA-N domain K08M4_RS16860 PF02386 Cation transport protein K08M4_RS16865 PF01641 SelR domain K08M4_RS16865 PF01625 Peptide methionine sulfoxide reductase K08M4_RS16870 PF02566 OsmC-like protein K08M4_RS16875 PF00691 OmpA family K08M4_RS16875 PF13488 Glycine zipper K08M4_RS16880 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS16885 PF00202 Aminotransferase class-III K08M4_RS16890 PF00266 Aminotransferase class-V K08M4_RS16900 PF01266 FAD dependent oxidoreductase K08M4_RS16905 PF00005 ABC transporter K08M4_RS16910 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS16915 PF07702 UTRA domain K08M4_RS16915 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS16925 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M4_RS16935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K08M4_RS16940 PF01202 Shikimate kinase K08M4_RS16945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_RS16945 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K08M4_RS16950 PF03575 Peptidase family S51 K08M4_RS16955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M4_RS16955 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS16965 PF00854 POT family K08M4_RS16970 PF03315 Serine dehydratase beta chain K08M4_RS16970 PF03313 Serine dehydratase alpha chain K08M4_RS17005 PF00005 ABC transporter K08M4_RS17005 PF00664 ABC transporter transmembrane region K08M4_RS17010 PF00005 ABC transporter K08M4_RS17010 PF00664 ABC transporter transmembrane region K08M4_RS17020 PF01476 LysM domain K08M4_RS17020 PF08525 Opacity-associated protein A N-terminal motif K08M4_RS17020 PF01551 Peptidase family M23 K08M4_RS17025 PF01906 Putative heavy-metal-binding K08M4_RS17055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_RS17060 PF03466 LysR substrate binding domain K08M4_RS17060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS17070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS17080 PF02687 FtsX-like permease family K08M4_RS17080 PF00005 ABC transporter K08M4_RS17080 PF12704 MacB-like periplasmic core domain K08M4_RS17085 PF00005 ABC transporter K08M4_RS17085 PF12704 MacB-like periplasmic core domain K08M4_RS17085 PF02687 FtsX-like permease family K08M4_RS17090 PF00005 ABC transporter K08M4_RS17090 PF02687 FtsX-like permease family K08M4_RS17090 PF12704 MacB-like periplasmic core domain K08M4_RS17100 PF17153 Periplasmic sensor domain, extracellular K08M4_RS17100 PF00563 EAL domain K08M4_RS17105 PF00155 Aminotransferase class I and II K08M4_RS17110 PF00107 Zinc-binding dehydrogenase K08M4_RS17110 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_RS17115 PF00999 Sodium/hydrogen exchanger family K08M4_RS17115 PF02254 TrkA-N domain K08M4_RS17120 PF02525 Flavodoxin-like fold K08M4_RS17140 PF00465 Iron-containing alcohol dehydrogenase K08M4_RS17145 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS17150 PF00892 EamA-like transporter family K08M4_RS17155 PF00360 Phytochrome region K08M4_RS17155 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS17155 PF01590 GAF domain K08M4_RS17155 PF00563 EAL domain K08M4_RS17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS17170 PF03466 LysR substrate binding domain K08M4_RS17180 PF13006 Insertion element 4 transposase N-terminal K08M4_RS17180 PF01609 Transposase DDE domain K08M4_RS17185 PF00801 PKD domain K08M4_RS17185 PF05547 Immune inhibitor A peptidase M6 K08M4_RS17200 PF01037 Lrp/AsnC ligand binding domain K08M4_RS17205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS17205 PF08447 PAS fold K08M4_RS17210 PF02780 Transketolase, C-terminal domain K08M4_RS17210 PF02779 Transketolase, pyrimidine binding domain K08M4_RS17210 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_RS17215 PF00923 Transaldolase/Fructose-6-phosphate aldolase K08M4_RS17230 PF03466 LysR substrate binding domain K08M4_RS17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS17250 PF00263 Bacterial type II and III secretion system protein K08M4_RS17250 PF04972 BON domain K08M4_RS17250 PF13629 Pilus formation protein N terminal region K08M4_RS17265 PF00437 Type II/IV secretion system protein K08M4_RS17305 PF00360 Phytochrome region K08M4_RS17305 PF01590 GAF domain K08M4_RS17305 PF00563 EAL domain K08M4_RS17305 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS17310 PF00581 Rhodanese-like domain K08M4_RS17330 PF00899 ThiF family K08M4_RS17335 PF00994 Probable molybdopterin binding domain K08M4_RS17335 PF03453 MoeA N-terminal region (domain I and II) K08M4_RS17335 PF03454 MoeA C-terminal region (domain IV) K08M4_RS17340 PF01227 GTP cyclohydrolase I K08M4_RS17345 PF03577 Peptidase family C69 K08M4_RS17355 PF07152 YaeQ protein K08M4_RS17360 PF00313 'Cold-shock' DNA-binding domain K08M4_RS17370 PF07995 Glucose / Sorbosone dehydrogenase K08M4_RS17375 PF07690 Major Facilitator Superfamily K08M4_RS17380 PF00005 ABC transporter K08M4_RS17390 PF12833 Helix-turn-helix domain K08M4_RS17395 PF00593 TonB dependent receptor K08M4_RS17395 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS17405 PF01032 FecCD transport family K08M4_RS17410 PF00378 Enoyl-CoA hydratase/isomerase K08M4_RS17425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_RS17425 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS17430 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_RS17440 PF00664 ABC transporter transmembrane region K08M4_RS17440 PF00005 ABC transporter K08M4_RS17445 PF00529 HlyD membrane-fusion protein of T1SS K08M4_RS17515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS17515 PF00529 HlyD membrane-fusion protein of T1SS K08M4_RS17520 PF00873 AcrB/AcrD/AcrF family K08M4_RS17555 PF03831 PhnA domain K08M4_RS17555 PF08274 PhnA Zinc-Ribbon K08M4_RS17570 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS17575 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_RS17580 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS17585 PF00005 ABC transporter K08M4_RS17590 PF00465 Iron-containing alcohol dehydrogenase K08M4_RS17595 PF06719 AraC-type transcriptional regulator N-terminus K08M4_RS17595 PF12833 Helix-turn-helix domain K08M4_RS17600 PF01042 Endoribonuclease L-PSP K08M4_RS17620 PF13302 Acetyltransferase (GNAT) domain K08M4_RS17625 PF01042 Endoribonuclease L-PSP K08M4_RS17630 PF02028 BCCT, betaine/carnitine/choline family transporter K08M4_RS17640 PF00704 Glycosyl hydrolases family 18 K08M4_RS17640 PF06483 Chitinase C K08M4_RS17645 PF07694 5TMR of 5TMR-LYT K08M4_RS17645 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS17665 PF07943 Penicillin-binding protein 5, C-terminal domain K08M4_RS17665 PF00768 D-alanyl-D-alanine carboxypeptidase K08M4_RS17675 PF00849 RNA pseudouridylate synthase K08M4_RS17685 PF16884 N-terminal domain of oxidoreductase K08M4_RS17685 PF00107 Zinc-binding dehydrogenase K08M4_RS17690 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS17690 PF16925 Tetracyclin repressor-like, C-terminal domain K08M4_RS17695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M4_RS17695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_RS17710 PF04972 BON domain K08M4_RS17710 PF00691 OmpA family K08M4_RS17720 PF00158 Sigma-54 interaction domain K08M4_RS17720 PF01590 GAF domain K08M4_RS17725 PF00042 Globin K08M4_RS17725 PF00970 Oxidoreductase FAD-binding domain K08M4_RS17725 PF00175 Oxidoreductase NAD-binding domain K08M4_RS17735 PF00654 Voltage gated chloride channel K08M4_RS17740 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M4_RS17740 PF07683 Cobalamin synthesis protein cobW C-terminal domain K08M4_RS17745 PF00271 Helicase conserved C-terminal domain K08M4_RS17745 PF00270 DEAD/DEAH box helicase K08M4_RS17750 PF01810 LysE type translocator K08M4_RS17775 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS17775 PF00072 Response regulator receiver domain K08M4_RS17780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS17780 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS17795 PF01037 Lrp/AsnC ligand binding domain K08M4_RS17815 PF01966 HD domain K08M4_RS17815 PF11871 Domain of unknown function (DUF3391) K08M4_RS17825 PF03264 NapC/NirT cytochrome c family, N-terminal region K08M4_RS17830 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) K08M4_RS17835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M4_RS17835 PF00384 Molybdopterin oxidoreductase K08M4_RS17835 PF01568 Molydopterin dinucleotide binding domain K08M4_RS17850 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term K08M4_RS17850 PF07730 Histidine kinase K08M4_RS17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS17850 PF00672 HAMP domain K08M4_RS17855 PF00072 Response regulator receiver domain K08M4_RS17855 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS17860 PF03606 C4-dicarboxylate anaerobic carrier K08M4_RS17880 PF01926 50S ribosome-binding GTPase K08M4_RS17885 PF00034 Cytochrome c K08M4_RS17890 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS17900 PF13953 PapC C-terminal domain K08M4_RS17900 PF13954 PapC N-terminal domain K08M4_RS17900 PF00577 Outer membrane usher protein K08M4_RS17925 PF01212 Beta-eliminating lyase K08M4_RS17930 PF00293 NUDIX domain K08M4_RS17935 PF12592 Protein of unknown function (DUF3763) K08M4_RS17935 PF07728 AAA domain (dynein-related subfamily) K08M4_RS17935 PF17868 AAA lid domain K08M4_RS17940 PF05762 VWA domain containing CoxE-like protein K08M4_RS17950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS17950 PF00672 HAMP domain K08M4_RS17950 PF02743 Cache domain K08M4_RS17995 PF03150 Di-haem cytochrome c peroxidase K08M4_RS18000 PF03150 Di-haem cytochrome c peroxidase K08M4_RS18000 PF00034 Cytochrome c K08M4_RS18010 PF00384 Molybdopterin oxidoreductase K08M4_RS18010 PF01568 Molydopterin dinucleotide binding domain K08M4_RS18010 PF18465 Rieske 3Fe-4S K08M4_RS18025 PF18267 Rubredoxin NAD+ reductase C-terminal domain K08M4_RS18025 PF04324 BFD-like [2Fe-2S] binding domain K08M4_RS18025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M4_RS18025 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS18025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_RS18030 PF13806 Rieske-like [2Fe-2S] domain K08M4_RS18035 PF01226 Formate/nitrite transporter K08M4_RS18040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_RS18040 PF10414 Sirohaem synthase dimerisation region K08M4_RS18040 PF14824 Sirohaem biosynthesis protein central K08M4_RS18055 PF00072 Response regulator receiver domain K08M4_RS18055 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS18060 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS18060 PF16527 Two-component sensor protein CpxA, periplasmic domain K08M4_RS18060 PF00672 HAMP domain K08M4_RS18065 PF00375 Sodium:dicarboxylate symporter family K08M4_RS18070 PF00593 TonB dependent receptor K08M4_RS18070 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS18080 PF01618 MotA/TolQ/ExbB proton channel family K08M4_RS18085 PF01618 MotA/TolQ/ExbB proton channel family K08M4_RS18090 PF02472 Biopolymer transport protein ExbD/TolR K08M4_RS18210 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS18210 PF00072 Response regulator receiver domain K08M4_RS18215 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS18215 PF00672 HAMP domain K08M4_RS18215 PF16527 Two-component sensor protein CpxA, periplasmic domain K08M4_RS18220 PF00375 Sodium:dicarboxylate symporter family K08M4_RS18225 PF00593 TonB dependent receptor K08M4_RS18225 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS18235 PF01618 MotA/TolQ/ExbB proton channel family K08M4_RS18240 PF01618 MotA/TolQ/ExbB proton channel family K08M4_RS18245 PF02472 Biopolymer transport protein ExbD/TolR K08M4_RS18295 PF01297 Zinc-uptake complex component A periplasmic K08M4_RS18300 PF00005 ABC transporter K08M4_RS18305 PF00950 ABC 3 transport family K08M4_RS18320 PF11756 Nitrous oxide-stimulated promoter K08M4_RS18325 PF01554 MatE K08M4_RS18345 PF07690 Major Facilitator Superfamily K08M4_RS18355 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term K08M4_RS18355 PF12833 Helix-turn-helix domain K08M4_RS18360 PF13193 AMP-binding enzyme C-terminal domain K08M4_RS18360 PF00501 AMP-binding enzyme K08M4_RS18365 PF00732 GMC oxidoreductase K08M4_RS18365 PF05199 GMC oxidoreductase K08M4_RS18370 PF00085 Thioredoxin K08M4_RS18375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K08M4_RS18375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K08M4_RS18385 PF04143 Sulphur transport K08M4_RS18400 PF03477 ATP cone domain K08M4_RS18400 PF13597 Anaerobic ribonucleoside-triphosphate reductase K08M4_RS18410 PF01554 MatE K08M4_RS18415 PF12833 Helix-turn-helix domain K08M4_RS18420 PF00155 Aminotransferase class I and II K08M4_RS18425 PF08443 RimK-like ATP-grasp domain K08M4_RS18425 PF18030 RimK PreATP-grasp domain K08M4_RS18430 PF12848 ABC transporter K08M4_RS18430 PF00005 ABC transporter K08M4_RS18450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K08M4_RS18450 PF07685 CobB/CobQ-like glutamine amidotransferase domain K08M4_RS18460 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS18465 PF00005 ABC transporter K08M4_RS18465 PF03459 TOBE domain K08M4_RS18475 PF00360 Phytochrome region K08M4_RS18475 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS18475 PF01590 GAF domain K08M4_RS18475 PF00563 EAL domain K08M4_RS18485 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS18485 PF17158 Membrane-associated sensor, integral membrane domain K08M4_RS18500 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K08M4_RS18500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K08M4_RS18500 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch K08M4_RS18505 PF02233 NAD(P) transhydrogenase beta subunit K08M4_RS18515 PF00072 Response regulator receiver domain K08M4_RS18515 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS18530 PF03701 Uncharacterised protein family (UPF0181) K08M4_RS18535 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS18535 PF08448 PAS fold K08M4_RS18550 PF01253 Translation initiation factor SUI1 K08M4_RS18565 PF07478 D-ala D-ala ligase C-terminus K08M4_RS18565 PF01820 D-ala D-ala ligase N-terminus K08M4_RS18570 PF05036 Sporulation related domain K08M4_RS18575 PF00583 Acetyltransferase (GNAT) family K08M4_RS18575 PF13380 CoA binding domain K08M4_RS18575 PF13607 Succinyl-CoA ligase like flavodoxin domain K08M4_RS18580 PF03466 LysR substrate binding domain K08M4_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS18585 PF00593 TonB dependent receptor K08M4_RS18585 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS18585 PF04886 PT repeat K08M4_RS18590 PF16363 GDP-mannose 4,6 dehydratase K08M4_RS18595 PF03746 LamB/YcsF family K08M4_RS18600 PF02682 Carboxyltransferase domain, subdomain C and D K08M4_RS18605 PF02626 Carboxyltransferase domain, subdomain A and B K08M4_RS18620 PF00005 ABC transporter K08M4_RS18625 PF13472 GDSL-like Lipase/Acylhydrolase family K08M4_RS18630 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K08M4_RS18630 PF12241 Trans-2-enoyl-CoA reductase catalytic region K08M4_RS18630 PF07055 Enoyl reductase FAD binding domain K08M4_RS18635 PF00563 EAL domain K08M4_RS18635 PF00498 FHA domain K08M4_RS18635 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS18645 PF03717 Penicillin-binding Protein dimerisation domain K08M4_RS18645 PF00905 Penicillin binding protein transpeptidase domain K08M4_RS18650 PF01556 DnaJ C terminal domain K08M4_RS18650 PF00226 DnaJ domain K08M4_RS18650 PF00684 DnaJ central domain K08M4_RS18665 PF00892 EamA-like transporter family K08M4_RS18670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS18670 PF12793 Sugar transport-related sRNA regulator N-term K08M4_RS18680 PF03061 Thioesterase superfamily K08M4_RS18685 PF01435 Peptidase family M48 K08M4_RS18695 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M4_RS18700 PF12262 Bacterial virulence factor lipase N-terminal K08M4_RS18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS18715 PF03466 LysR substrate binding domain K08M4_RS18730 PF08543 Phosphomethylpyrimidine kinase K08M4_RS18735 PF00155 Aminotransferase class I and II K08M4_RS18740 PF06826 Predicted Permease Membrane Region K08M4_RS18740 PF02080 TrkA-C domain K08M4_RS18745 PF13737 Transposase DDE domain K08M4_RS18750 PF13737 Transposase DDE domain K08M4_RS18760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS18760 PF00529 HlyD membrane-fusion protein of T1SS K08M4_RS18780 PF13091 PLD-like domain K08M4_RS18785 PF07244 Surface antigen variable number repeat K08M4_RS18785 PF17243 POTRA domain TamA domain 1 K08M4_RS18785 PF01103 Surface antigen K08M4_RS18790 PF00270 DEAD/DEAH box helicase K08M4_RS18790 PF00271 Helicase conserved C-terminal domain K08M4_RS18805 PF03741 Integral membrane protein TerC family K08M4_RS18810 PF02872 5'-nucleotidase, C-terminal domain K08M4_RS18810 PF00149 Calcineurin-like phosphoesterase K08M4_RS18815 PF11398 Protein of unknown function (DUF2813) K08M4_RS18820 PF06496 Protein of unknown function (DUF1097) K08M4_RS18825 PF03466 LysR substrate binding domain K08M4_RS18825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS18830 PF01226 Formate/nitrite transporter K08M4_RS18835 PF04264 YceI-like domain K08M4_RS18840 PF01292 Prokaryotic cytochrome b561 K08M4_RS18855 PF00563 EAL domain K08M4_RS18855 PF12792 CSS motif domain associated with EAL K08M4_RS18860 PF00873 AcrB/AcrD/AcrF family K08M4_RS18870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS18870 PF00529 HlyD membrane-fusion protein of T1SS K08M4_RS18880 PF00271 Helicase conserved C-terminal domain K08M4_RS18880 PF00270 DEAD/DEAH box helicase K08M4_RS18885 PF04336 Acyl carrier protein phosphodiesterase K08M4_RS18890 PF03222 Tryptophan/tyrosine permease family K08M4_RS18895 PF17200 Single Cache domain 2 K08M4_RS18895 PF00672 HAMP domain K08M4_RS18895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS18905 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS18910 PF11849 Domain of unknown function (DUF3369) K08M4_RS18925 PF00294 pfkB family carbohydrate kinase K08M4_RS18930 PF01268 Formate--tetrahydrofolate ligase K08M4_RS18935 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS18940 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS18945 PF00472 RF-1 domain K08M4_RS18965 PF01571 Aminomethyltransferase folate-binding domain K08M4_RS18965 PF08669 Glycine cleavage T-protein C-terminal barrel domain K08M4_RS18975 PF00464 Serine hydroxymethyltransferase K08M4_RS18980 PF01597 Glycine cleavage H-protein K08M4_RS18985 PF02347 Glycine cleavage system P-protein K08M4_RS19000 PF02661 Fic/DOC family K08M4_RS19010 PF01548 Transposase K08M4_RS19010 PF02371 Transposase IS116/IS110/IS902 family K08M4_RS19020 PF00589 Phage integrase family K08M4_RS19020 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS19035 PF14319 Transposase zinc-binding domain K08M4_RS19035 PF04986 Putative transposase K08M4_RS19040 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_RS19040 PF00589 Phage integrase family K08M4_RS19045 PF01554 MatE K08M4_RS19050 PF01810 LysE type translocator K08M4_RS19065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_RS19080 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_RS19085 PF07690 Major Facilitator Superfamily K08M4_RS19090 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS19090 PF00989 PAS fold K08M4_RS19090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS19090 PF00672 HAMP domain K08M4_RS19095 PF00072 Response regulator receiver domain K08M4_RS19095 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS19110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS19110 PF03466 LysR substrate binding domain K08M4_RS19115 PF13533 Biotin-lipoyl like K08M4_RS19120 PF07690 Major Facilitator Superfamily K08M4_RS19135 PF04539 Sigma-70 region 3 K08M4_RS19135 PF04545 Sigma-70, region 4 K08M4_RS19135 PF00140 Sigma-70 factor, region 1.2 K08M4_RS19135 PF04542 Sigma-70 region 2 K08M4_RS19160 PF13533 Biotin-lipoyl like K08M4_RS19165 PF00072 Response regulator receiver domain K08M4_RS19165 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS19165 PF09308 LuxQ, periplasmic K08M4_RS19170 PF02321 Outer membrane efflux protein K08M4_RS19175 PF00664 ABC transporter transmembrane region K08M4_RS19175 PF00005 ABC transporter K08M4_RS19180 PF00005 ABC transporter K08M4_RS19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS19190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K08M4_RS19190 PF01627 Hpt domain K08M4_RS19190 PF00072 Response regulator receiver domain K08M4_RS19190 PF00672 HAMP domain K08M4_RS19190 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS19210 PF13186 Iron-sulfur cluster-binding domain K08M4_RS19210 PF04055 Radical SAM superfamily K08M4_RS19215 PF03781 Sulfatase-modifying factor enzyme 1 K08M4_RS19225 PF03466 LysR substrate binding domain K08M4_RS19225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS19240 PF13519 von Willebrand factor type A domain K08M4_RS19255 PF17863 AAA lid domain K08M4_RS19255 PF07726 ATPase family associated with various cellular activities (AAA) K08M4_RS19265 PF00884 Sulfatase K08M4_RS19270 PF00884 Sulfatase K08M4_RS19275 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K08M4_RS19280 PF00583 Acetyltransferase (GNAT) family K08M4_RS19285 PF02469 Fasciclin domain K08M4_RS19305 PF02567 Phenazine biosynthesis-like protein K08M4_RS19310 PF01810 LysE type translocator K08M4_RS19320 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS19320 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS19320 PF00563 EAL domain K08M4_RS19340 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M4_RS19350 PF00034 Cytochrome c K08M4_RS19350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M4_RS19360 PF00561 alpha/beta hydrolase fold K08M4_RS19375 PF02028 BCCT, betaine/carnitine/choline family transporter K08M4_RS19390 PF00171 Aldehyde dehydrogenase family K08M4_RS19400 PF03466 LysR substrate binding domain K08M4_RS19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS19410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS19410 PF00005 ABC transporter K08M4_RS19415 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M4_RS19415 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS19420 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS19425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS19440 PF05025 RbsD / FucU transport protein family K08M4_RS19445 PF00005 ABC transporter K08M4_RS19450 PF02653 Branched-chain amino acid transport system / permease component K08M4_RS19455 PF13407 Periplasmic binding protein domain K08M4_RS19460 PF00294 pfkB family carbohydrate kinase K08M4_RS19465 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS19475 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS19475 PF00563 EAL domain K08M4_RS19475 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS19495 PF01145 SPFH domain / Band 7 family K08M4_RS19515 PF01568 Molydopterin dinucleotide binding domain K08M4_RS19515 PF00384 Molybdopterin oxidoreductase K08M4_RS19515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M4_RS19520 PF04324 BFD-like [2Fe-2S] binding domain K08M4_RS19520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_RS19520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M4_RS19520 PF18267 Rubredoxin NAD+ reductase C-terminal domain K08M4_RS19520 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS19530 PF07690 Major Facilitator Superfamily K08M4_RS19535 PF00069 Protein kinase domain K08M4_RS19535 PF03793 PASTA domain K08M4_RS19540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M4_RS19540 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS19545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_RS19545 PF00381 PTS HPr component phosphorylation site K08M4_RS19550 PF00294 pfkB family carbohydrate kinase K08M4_RS19555 PF02378 Phosphotransferase system, EIIC K08M4_RS19555 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_RS19565 PF02798 Glutathione S-transferase, N-terminal domain K08M4_RS19570 PF01844 HNH endonuclease K08M4_RS19595 PF17149 Periplasmic sensor domain found in signal transduction proteins K08M4_RS19595 PF00072 Response regulator receiver domain K08M4_RS19595 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS19595 PF01627 Hpt domain K08M4_RS19595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS19595 PF00672 HAMP domain K08M4_RS19600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M4_RS19605 PF02142 MGS-like domain K08M4_RS19615 PF13361 UvrD-like helicase C-terminal domain K08M4_RS19615 PF12462 DNA helicase IV / RNA helicase N terminal K08M4_RS19615 PF00580 UvrD/REP helicase N-terminal domain K08M4_RS19620 PF12805 FUSC-like inner membrane protein yccS K08M4_RS19640 PF03466 LysR substrate binding domain K08M4_RS19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS19645 PF04055 Radical SAM superfamily K08M4_RS19650 PF11230 Protein of unknown function (DUF3029) K08M4_RS19655 PF01609 Transposase DDE domain K08M4_RS19655 PF13006 Insertion element 4 transposase N-terminal K08M4_RS19660 PF07690 Major Facilitator Superfamily K08M4_RS19665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS19665 PF03466 LysR substrate binding domain K08M4_RS19670 PF00072 Response regulator receiver domain K08M4_RS19670 PF09308 LuxQ, periplasmic K08M4_RS19670 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS19675 PF00072 Response regulator receiver domain K08M4_RS19680 PF00005 ABC transporter K08M4_RS19685 PF01032 FecCD transport family K08M4_RS19690 PF01032 FecCD transport family K08M4_RS19695 PF01497 Periplasmic binding protein K08M4_RS19720 PF01594 AI-2E family transporter K08M4_RS19730 PF13533 Biotin-lipoyl like K08M4_RS19740 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS19740 PF07694 5TMR of 5TMR-LYT K08M4_RS19750 PF03466 LysR substrate binding domain K08M4_RS19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS19760 PF02581 Thiamine monophosphate synthase K08M4_RS19765 PF02743 Cache domain K08M4_RS19765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS19765 PF00672 HAMP domain K08M4_RS19770 PF02110 Hydroxyethylthiazole kinase family K08M4_RS19775 PF03070 TENA/THI-4/PQQC family K08M4_RS19780 PF09084 NMT1/THI5 like K08M4_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS19790 PF00005 ABC transporter K08M4_RS19795 PF08543 Phosphomethylpyrimidine kinase K08M4_RS19800 PF00892 EamA-like transporter family K08M4_RS19825 PF00043 Glutathione S-transferase, C-terminal domain K08M4_RS19825 PF13417 Glutathione S-transferase, N-terminal domain K08M4_RS19835 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS19845 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) K08M4_RS19860 PF13358 DDE superfamily endonuclease K08M4_RS19885 PF00478 IMP dehydrogenase / GMP reductase domain K08M4_RS19890 PF10549 ORF11CD3 domain K08M4_RS19890 PF09669 Phage regulatory protein Rha (Phage_pRha) K08M4_RS20035 PF05840 Bacteriophage replication gene A protein (GPA) K08M4_RS20070 PF06892 Phage regulatory protein CII (CP76) K08M4_RS20090 PF07669 Eco57I restriction-modification methylase K08M4_RS20095 PF17728 BsuBI/PstI restriction endonuclease HTH domain K08M4_RS20095 PF06616 BsuBI/PstI restriction endonuclease domain K08M4_RS20110 PF00589 Phage integrase family K08M4_RS20115 PF00478 IMP dehydrogenase / GMP reductase domain K08M4_RS20125 PF00072 Response regulator receiver domain K08M4_RS20125 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS20135 PF01554 MatE K08M4_RS20140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS20140 PF03466 LysR substrate binding domain K08M4_RS20145 PF00892 EamA-like transporter family K08M4_RS20165 PF00107 Zinc-binding dehydrogenase K08M4_RS20165 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_RS20180 PF00005 ABC transporter K08M4_RS20185 PF01032 FecCD transport family K08M4_RS20190 PF01032 FecCD transport family K08M4_RS20195 PF01497 Periplasmic binding protein K08M4_RS20200 PF00593 TonB dependent receptor K08M4_RS20200 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS20200 PF07660 Secretin and TonB N terminus short domain K08M4_RS20205 PF07715 TonB-dependent Receptor Plug Domain K08M4_RS20205 PF00593 TonB dependent receptor K08M4_RS20215 PF00871 Acetokinase family K08M4_RS20220 PF00270 DEAD/DEAH box helicase K08M4_RS20220 PF00271 Helicase conserved C-terminal domain K08M4_RS20220 PF03880 DbpA RNA binding domain K08M4_RS20225 PF00773 RNB domain K08M4_RS20225 PF17876 Cold shock domain K08M4_RS20225 PF08206 Ribonuclease B OB domain K08M4_RS20225 PF00575 S1 RNA binding domain K08M4_RS20230 PF12833 Helix-turn-helix domain K08M4_RS20240 PF12849 PBP superfamily domain K08M4_RS20245 PF01575 MaoC like domain K08M4_RS20250 PF00873 AcrB/AcrD/AcrF family K08M4_RS20255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K08M4_RS20260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_RS20275 PF07687 Peptidase dimerisation domain K08M4_RS20275 PF01546 Peptidase family M20/M25/M40 K08M4_RS20280 PF00248 Aldo/keto reductase family K08M4_RS20285 PF00588 SpoU rRNA Methylase family K08M4_RS20285 PF08032 RNA 2'-O ribose methyltransferase substrate binding K08M4_RS20290 PF11953 Domain of unknown function (DUF3470) K08M4_RS20290 PF00037 4Fe-4S binding domain K08M4_RS20310 PF00271 Helicase conserved C-terminal domain K08M4_RS20310 PF00270 DEAD/DEAH box helicase K08M4_RS20320 PF02811 PHP domain K08M4_RS20320 PF00929 Exonuclease K08M4_RS20320 PF14579 Helix-hairpin-helix motif K08M4_RS20320 PF11490 DNA polymerase III polC-type N-terminus II K08M4_RS20320 PF07733 Bacterial DNA polymerase III alpha NTPase domain K08M4_RS20320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K08M4_RS20335 PF00270 DEAD/DEAH box helicase K08M4_RS20335 PF00271 Helicase conserved C-terminal domain K08M4_RS20335 PF03880 DbpA RNA binding domain K08M4_RS20340 PF00248 Aldo/keto reductase family K08M4_RS20365 PF05552 Conserved TM helix K08M4_RS20365 PF00924 Mechanosensitive ion channel K08M4_RS20375 PF11412 Disulphide bond corrector protein DsbC K08M4_RS20375 PF02683 Cytochrome C biogenesis protein transmembrane region K08M4_RS20380 PF00085 Thioredoxin K08M4_RS20385 PF01966 HD domain K08M4_RS20390 PF13302 Acetyltransferase (GNAT) domain K08M4_RS20395 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS20395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS20395 PF16527 Two-component sensor protein CpxA, periplasmic domain K08M4_RS20395 PF00672 HAMP domain K08M4_RS20400 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS20400 PF00072 Response regulator receiver domain K08M4_RS20410 PF00563 EAL domain K08M4_RS20410 PF13426 PAS domain K08M4_RS20410 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS20420 PF00005 ABC transporter K08M4_RS20445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_RS20445 PF01872 RibD C-terminal domain K08M4_RS20455 PF00849 RNA pseudouridylate synthase K08M4_RS20485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS20490 PF18030 RimK PreATP-grasp domain K08M4_RS20490 PF08443 RimK-like ATP-grasp domain K08M4_RS20495 PF08443 RimK-like ATP-grasp domain K08M4_RS20495 PF18030 RimK PreATP-grasp domain K08M4_RS20510 PF13416 Bacterial extracellular solute-binding protein K08M4_RS20515 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS20520 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS20525 PF17912 MalK OB fold domain K08M4_RS20525 PF00005 ABC transporter K08M4_RS20530 PF03009 Glycerophosphoryl diester phosphodiesterase family K08M4_RS20555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K08M4_RS20565 PF13417 Glutathione S-transferase, N-terminal domain K08M4_RS20565 PF04399 Glutaredoxin 2, C terminal domain K08M4_RS20580 PF03618 Kinase/pyrophosphorylase K08M4_RS20585 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K08M4_RS20585 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_RS20585 PF00391 PEP-utilising enzyme, mobile domain K08M4_RS20590 PF01554 MatE K08M4_RS20595 PF08348 YheO-like PAS domain K08M4_RS20595 PF13309 HTH domain K08M4_RS20600 PF01042 Endoribonuclease L-PSP K08M4_RS20605 PF00375 Sodium:dicarboxylate symporter family K08M4_RS20610 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS20610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_RS20635 PF13358 DDE superfamily endonuclease K08M4_RS20700 PF04013 Putative SAM-dependent RNA methyltransferase K08M4_RS20710 PF00535 Glycosyl transferase family 2 K08M4_RS20730 PF08281 Sigma-70, region 4 K08M4_RS20730 PF04542 Sigma-70 region 2 K08M4_RS20735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K08M4_RS20750 PF02743 Cache domain K08M4_RS20750 PF00672 HAMP domain K08M4_RS20750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS20760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K08M4_RS20765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS20770 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS20775 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS20775 PF12911 N-terminal TM domain of oligopeptide transport permease C K08M4_RS20780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS20780 PF00005 ABC transporter K08M4_RS20795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS20795 PF03466 LysR substrate binding domain K08M4_RS20800 PF00106 short chain dehydrogenase K08M4_RS20810 PF16868 NMT1-like family K08M4_RS20820 PF00483 Nucleotidyl transferase K08M4_RS20835 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS20840 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS20845 PF00005 ABC transporter K08M4_RS20860 PF00158 Sigma-54 interaction domain K08M4_RS20860 PF00072 Response regulator receiver domain K08M4_RS20860 PF02954 Bacterial regulatory protein, Fis family K08M4_RS20865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS20865 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS20865 PF02743 Cache domain K08M4_RS20870 PF02311 AraC-like ligand binding domain K08M4_RS20870 PF12833 Helix-turn-helix domain K08M4_RS20880 PF13378 Enolase C-terminal domain-like K08M4_RS20880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K08M4_RS20890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS20890 PF03466 LysR substrate binding domain K08M4_RS20900 PF02903 Alpha amylase, N-terminal ig-like domain K08M4_RS20900 PF00128 Alpha amylase, catalytic domain K08M4_RS20910 PF00672 HAMP domain K08M4_RS20910 PF17200 Single Cache domain 2 K08M4_RS20910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS20915 PF03466 LysR substrate binding domain K08M4_RS20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS20920 PF02743 Cache domain K08M4_RS20920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS20920 PF00672 HAMP domain K08M4_RS20935 PF00392 Bacterial regulatory proteins, gntR family K08M4_RS20935 PF00155 Aminotransferase class I and II K08M4_RS20940 PF03222 Tryptophan/tyrosine permease family K08M4_RS20945 PF01047 MarR family K08M4_RS20950 PF02566 OsmC-like protein K08M4_RS20955 PF12729 Four helix bundle sensory module for signal transduction K08M4_RS20955 PF00672 HAMP domain K08M4_RS20955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS20965 PF00440 Bacterial regulatory proteins, tetR family K08M4_RS20975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_RS20985 PF12833 Helix-turn-helix domain K08M4_RS20990 PF02378 Phosphotransferase system, EIIC K08M4_RS20990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_RS20990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_RS20995 PF01238 Phosphomannose isomerase type I K08M4_RS21010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_RS21015 PF00246 Zinc carboxypeptidase K08M4_RS21025 PF00912 Transglycosylase K08M4_RS21030 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_RS21030 PF00107 Zinc-binding dehydrogenase K08M4_RS21035 PF00756 Putative esterase K08M4_RS21045 PF00293 NUDIX domain K08M4_RS21045 PF13344 Haloacid dehalogenase-like hydrolase K08M4_RS21050 PF00171 Aldehyde dehydrogenase family K08M4_RS21055 PF01590 GAF domain K08M4_RS21055 PF02954 Bacterial regulatory protein, Fis family K08M4_RS21055 PF00158 Sigma-54 interaction domain K08M4_RS21060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_RS21060 PF00672 HAMP domain K08M4_RS21065 PF03466 LysR substrate binding domain K08M4_RS21065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS21070 PF02798 Glutathione S-transferase, N-terminal domain K08M4_RS21070 PF00043 Glutathione S-transferase, C-terminal domain K08M4_RS21105 PF03605 Anaerobic c4-dicarboxylate membrane transporter K08M4_RS21110 PF13419 Haloacid dehalogenase-like hydrolase K08M4_RS21115 PF01966 HD domain K08M4_RS21160 PF01047 MarR family K08M4_RS21165 PF00892 EamA-like transporter family K08M4_RS21170 PF00892 EamA-like transporter family K08M4_RS21190 PF12945 Flagellar protein YcgR K08M4_RS21190 PF07238 PilZ domain K08M4_RS21195 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M4_RS21195 PF13654 AAA domain K08M4_RS21205 PF00005 ABC transporter K08M4_RS21205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS21220 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS21230 PF01263 Aldose 1-epimerase K08M4_RS21235 PF06165 Glycosyltransferase family 36 K08M4_RS21235 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain K08M4_RS21240 PF17912 MalK OB fold domain K08M4_RS21240 PF00005 ABC transporter K08M4_RS21240 PF03459 TOBE domain K08M4_RS21245 PF00232 Glycosyl hydrolase family 1 K08M4_RS21250 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS21255 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_RS21265 PF00356 Bacterial regulatory proteins, lacI family K08M4_RS21280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M4_RS21280 PF00326 Prolyl oligopeptidase family K08M4_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS21285 PF03466 LysR substrate binding domain K08M4_RS21290 PF02652 L-lactate permease K08M4_RS21295 PF01070 FMN-dependent dehydrogenase K08M4_RS21315 PF01497 Periplasmic binding protein K08M4_RS21315 PF12833 Helix-turn-helix domain K08M4_RS21320 PF00155 Aminotransferase class I and II K08M4_RS21325 PF17773 UPF0176 acylphosphatase like domain K08M4_RS21325 PF00581 Rhodanese-like domain K08M4_RS21340 PF01238 Phosphomannose isomerase type I K08M4_RS21345 PF07690 Major Facilitator Superfamily K08M4_RS21350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS21350 PF07730 Histidine kinase K08M4_RS21350 PF05231 MASE1 K08M4_RS21355 PF00072 Response regulator receiver domain K08M4_RS21355 PF00196 Bacterial regulatory proteins, luxR family K08M4_RS21360 PF07690 Major Facilitator Superfamily K08M4_RS21375 PF00563 EAL domain K08M4_RS21375 PF00990 Diguanylate cyclase, GGDEF domain K08M4_RS21375 PF03707 Bacterial signalling protein N terminal repeat K08M4_RS21385 PF05726 Pirin C-terminal cupin domain K08M4_RS21385 PF02678 Pirin K08M4_RS21390 PF06865 Pyrimidine/purine nucleoside phosphorylase K08M4_RS21400 PF08329 Chitinase A, N-terminal domain K08M4_RS21400 PF00704 Glycosyl hydrolases family 18 K08M4_RS21405 PF12697 Alpha/beta hydrolase family K08M4_RS21425 PF12833 Helix-turn-helix domain K08M4_RS21425 PF12852 Cupin K08M4_RS21445 PF01124 MAPEG family K08M4_RS21450 PF07670 Nucleoside recognition K08M4_RS21455 PF07670 Nucleoside recognition K08M4_RS21460 PF03600 Citrate transporter K08M4_RS21470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M4_RS21470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K08M4_RS21475 PF06029 AlkA N-terminal domain K08M4_RS21475 PF00730 HhH-GPD superfamily base excision DNA repair protein K08M4_RS21485 PF03466 LysR substrate binding domain K08M4_RS21485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS21495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K08M4_RS21510 PF00881 Nitroreductase family K08M4_RS21515 PF00753 Metallo-beta-lactamase superfamily K08M4_RS21515 PF00258 Flavodoxin K08M4_RS21515 PF00301 Rubredoxin K08M4_RS21520 PF18113 Rubredoxin binding C-terminal domain K08M4_RS21520 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_RS21525 PF03616 Sodium/glutamate symporter K08M4_RS21530 PF10928 Protein of unknown function (DUF2810) K08M4_RS21535 PF01757 Acyltransferase family K08M4_RS21550 PF04542 Sigma-70 region 2 K08M4_RS21550 PF04545 Sigma-70, region 4 K08M4_RS21555 PF12973 ChrR Cupin-like domain K08M4_RS21565 PF03441 FAD binding domain of DNA photolyase K08M4_RS21565 PF00875 DNA photolyase K08M4_RS21575 PF00106 short chain dehydrogenase K08M4_RS21580 PF01593 Flavin containing amine oxidoreductase K08M4_RS21615 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) K08M4_RS21635 PF00367 phosphotransferase system, EIIB K08M4_RS21635 PF02378 Phosphotransferase system, EIIC K08M4_RS21635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K08M4_RS21645 PF07689 KaiB domain K08M4_RS21645 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS21645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS21650 PF00486 Transcriptional regulatory protein, C terminal K08M4_RS21650 PF00072 Response regulator receiver domain K08M4_RS21655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS21655 PF03466 LysR substrate binding domain K08M4_RS21665 PF07690 Major Facilitator Superfamily K08M4_RS21670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_RS21685 PF07549 SecD/SecF GG Motif K08M4_RS21685 PF02355 Protein export membrane protein K08M4_RS21690 PF02355 Protein export membrane protein K08M4_RS21690 PF07549 SecD/SecF GG Motif K08M4_RS21690 PF13721 SecD export protein N-terminal TM region K08M4_RS21700 PF05193 Peptidase M16 inactive domain K08M4_RS21700 PF00675 Insulinase (Peptidase family M16) K08M4_RS21705 PF05193 Peptidase M16 inactive domain K08M4_RS21705 PF00675 Insulinase (Peptidase family M16) K08M4_RS21710 PF00072 Response regulator receiver domain K08M4_RS21710 PF04397 LytTr DNA-binding domain K08M4_RS21715 PF07694 5TMR of 5TMR-LYT K08M4_RS21715 PF06580 Histidine kinase K08M4_RS21715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS21730 PF12704 MacB-like periplasmic core domain K08M4_RS21730 PF02687 FtsX-like permease family K08M4_RS21735 PF00005 ABC transporter K08M4_RS21750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_RS21750 PF03466 LysR substrate binding domain K08M4_RS21760 PF00144 Beta-lactamase K08M4_RS21770 PF01546 Peptidase family M20/M25/M40 K08M4_RS21770 PF07687 Peptidase dimerisation domain K08M4_RS21775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_RS21775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M4_RS21780 PF01709 Transcriptional regulator K08M4_RS21790 PF01329 Pterin 4 alpha carbinolamine dehydratase K08M4_RS21795 PF00351 Biopterin-dependent aromatic amino acid hydroxylase K08M4_RS21800 PF13193 AMP-binding enzyme C-terminal domain K08M4_RS21800 PF00501 AMP-binding enzyme K08M4_RS21810 PF00696 Amino acid kinase family K08M4_RS21815 PF02798 Glutathione S-transferase, N-terminal domain K08M4_RS21815 PF14497 Glutathione S-transferase, C-terminal domain K08M4_RS21825 PF04209 homogentisate 1,2-dioxygenase K08M4_RS21830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_RS21850 PF00072 Response regulator receiver domain K08M4_RS21850 PF17149 Periplasmic sensor domain found in signal transduction proteins K08M4_RS21850 PF00672 HAMP domain K08M4_RS21850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_RS21850 PF00512 His Kinase A (phospho-acceptor) domain K08M4_RS21850 PF01627 Hpt domain K08M4_RS21860 PF00925 GTP cyclohydrolase II K08M4_RS21860 PF08719 Domain of unknown function (DUF1768) K08M4_RS21870 PF00005 ABC transporter K08M4_RS21870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS21875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_RS21875 PF00005 ABC transporter