locus-tag class description N646_RS00005 PF00425 chorismate binding enzyme N646_RS00010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N646_RS00010 PF16582 Middle domain of thiamine pyrophosphate N646_RS00010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N646_RS00015 PF12697 Alpha/beta hydrolase family N646_RS00020 PF00378 Enoyl-CoA hydratase/isomerase N646_RS00025 PF13378 Enolase C-terminal domain-like N646_RS00030 PF13193 AMP-binding enzyme C-terminal domain N646_RS00030 PF00501 AMP-binding enzyme N646_RS00040 PF03601 Conserved hypothetical protein 698 N646_RS00045 PF07690 Major Facilitator Superfamily N646_RS00070 PF00529 HlyD membrane-fusion protein of T1SS N646_RS00070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N646_RS00075 PF00873 AcrB/AcrD/AcrF family N646_RS00090 PF00291 Pyridoxal-phosphate dependent enzyme N646_RS00095 PF01037 Lrp/AsnC ligand binding domain N646_RS00095 PF13404 AsnC-type helix-turn-helix domain N646_RS00110 PF09619 Type III secretion system lipoprotein chaperone (YscW) N646_RS00115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N646_RS00125 PF00990 Diguanylate cyclase, GGDEF domain N646_RS00130 PF00588 SpoU rRNA Methylase family N646_RS00130 PF08032 RNA 2'-O ribose methyltransferase substrate binding N646_RS00135 PF00571 CBS domain N646_RS00135 PF00478 IMP dehydrogenase / GMP reductase domain N646_RS00140 PF00403 Heavy-metal-associated domain N646_RS00145 PF01048 Phosphorylase superfamily N646_RS00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS00155 PF00672 HAMP domain N646_RS00160 PF01230 HIT domain N646_RS00175 PF13036 Peptidoglycan-synthase activator LpoB N646_RS00175 PF08139 Prokaryotic membrane lipoprotein lipid attachment site N646_RS00185 PF05728 Uncharacterised protein family (UPF0227) N646_RS00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS00205 PF00271 Helicase conserved C-terminal domain N646_RS00205 PF03461 TRCF domain N646_RS00205 PF02559 CarD-like/TRCF domain N646_RS00205 PF17757 UvrB interaction domain N646_RS00205 PF00270 DEAD/DEAH box helicase N646_RS00215 PF12704 MacB-like periplasmic core domain N646_RS00215 PF02687 FtsX-like permease family N646_RS00220 PF00005 ABC transporter N646_RS00225 PF12704 MacB-like periplasmic core domain N646_RS00225 PF02687 FtsX-like permease family N646_RS00235 PF13567 Domain of unknown function (DUF4131) N646_RS00235 PF03772 Competence protein N646_RS00235 PF00753 Metallo-beta-lactamase superfamily N646_RS00240 PF00005 ABC transporter N646_RS00240 PF00664 ABC transporter transmembrane region N646_RS00245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N646_RS00250 PF03966 Trm112p-like protein N646_RS00255 PF02348 Cytidylyltransferase N646_RS00260 PF04293 SpoVR like protein N646_RS00265 PF04285 Protein of unknown function (DUF444) N646_RS00270 PF06798 PrkA serine protein kinase C-terminal domain N646_RS00270 PF08298 PrkA AAA domain N646_RS00275 PF03887 YfbU domain N646_RS00285 PF04055 Radical SAM superfamily N646_RS00295 PF02901 Pyruvate formate lyase-like N646_RS00295 PF01228 Glycine radical N646_RS00310 PF00005 ABC transporter N646_RS00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS00320 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS00325 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS00335 PF03372 Endonuclease/Exonuclease/phosphatase family N646_RS00340 PF10689 Protein of unknown function (DUF2496) N646_RS00345 PF07445 Primosomal replication protein priC N646_RS00350 PF01925 Sulfite exporter TauE/SafE N646_RS00355 PF13307 Helicase C-terminal domain N646_RS00355 PF06733 DEAD_2 N646_RS00365 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N646_RS00370 PF00849 RNA pseudouridylate synthase N646_RS00375 PF03971 Monomeric isocitrate dehydrogenase N646_RS00380 PF00313 'Cold-shock' DNA-binding domain N646_RS00385 PF02617 ATP-dependent Clp protease adaptor protein ClpS N646_RS00390 PF07724 AAA domain (Cdc48 subfamily) N646_RS00390 PF02861 Clp amino terminal domain, pathogenicity island component N646_RS00390 PF17871 AAA lid domain N646_RS00390 PF00004 ATPase family associated with various cellular activities (AAA) N646_RS00390 PF10431 C-terminal, D2-small domain, of ClpB protein N646_RS00395 PF01176 Translation initiation factor 1A / IF-1 N646_RS00400 PF04377 Arginine-tRNA-protein transferase, C terminus N646_RS00400 PF04376 Arginine-tRNA-protein transferase, N terminus N646_RS00405 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N646_RS00415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N646_RS00420 PF10692 Protein of unknown function (DUF2498) N646_RS00425 PF08272 Topoisomerase I zinc-ribbon-like N646_RS00425 PF01751 Toprim domain N646_RS00425 PF01396 Topoisomerase DNA binding C4 zinc finger N646_RS00425 PF01131 DNA topoisomerase N646_RS00430 PF00483 Nucleotidyl transferase N646_RS00435 PF08323 Starch synthase catalytic domain N646_RS00435 PF00534 Glycosyl transferases group 1 N646_RS00455 PF04994 TfoX C-terminal domain N646_RS00455 PF04993 TfoX N-terminal domain N646_RS00460 PF00356 Bacterial regulatory proteins, lacI family N646_RS00465 PF02613 Nitrate reductase delta subunit N646_RS00470 PF00072 Response regulator receiver domain N646_RS00470 PF00486 Transcriptional regulatory protein, C terminal N646_RS00475 PF02698 DUF218 domain N646_RS00480 PF13847 Methyltransferase domain N646_RS00485 PF03882 MukF winged-helix domain N646_RS00485 PF17193 MukF C-terminal domain N646_RS00485 PF17192 MukF middle domain N646_RS00490 PF04288 MukE-like family N646_RS00495 PF04310 MukB N-terminal N646_RS00495 PF16330 MukB hinge domain N646_RS00510 PF18030 RimK PreATP-grasp domain N646_RS00510 PF08443 RimK-like ATP-grasp domain N646_RS00515 PF08003 Protein of unknown function (DUF1698) N646_RS00520 PF13649 Methyltransferase domain N646_RS00525 PF01904 Protein of unknown function DUF72 N646_RS00530 PF02938 GAD domain N646_RS00530 PF00152 tRNA synthetases class II (D, K and N) N646_RS00530 PF01336 OB-fold nucleic acid binding domain N646_RS00535 PF01709 Transcriptional regulator N646_RS00540 PF02075 Crossover junction endodeoxyribonuclease RuvC N646_RS00545 PF01330 RuvA N terminal domain N646_RS00545 PF07499 RuvA, C-terminal domain N646_RS00550 PF17864 RuvB AAA lid domain N646_RS00550 PF05491 RuvB C-terminal winged helix domain N646_RS00550 PF05496 Holliday junction DNA helicase RuvB P-loop domain N646_RS00555 PF01654 Cytochrome bd terminal oxidase subunit I N646_RS00560 PF02322 Cytochrome bd terminal oxidase subunit II N646_RS00575 PF03061 Thioesterase superfamily N646_RS00580 PF01618 MotA/TolQ/ExbB proton channel family N646_RS00585 PF02472 Biopolymer transport protein ExbD/TolR N646_RS00595 PF04052 TolB amino-terminal domain N646_RS00595 PF07676 WD40-like Beta Propeller Repeat N646_RS00600 PF00691 OmpA family N646_RS00605 PF13174 Tetratricopeptide repeat N646_RS00605 PF16331 TolA binding protein trimerisation N646_RS00610 PF02445 Quinolinate synthetase A protein N646_RS00620 PF03994 Domain of Unknown Function (DUF350) N646_RS00630 PF03738 Glutathionylspermidine synthase preATP-grasp N646_RS00640 PF00512 His Kinase A (phospho-acceptor) domain N646_RS00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS00640 PF00072 Response regulator receiver domain N646_RS00640 PF09308 LuxQ, periplasmic N646_RS00645 PF06610 L-alanine exporter N646_RS00670 PF02322 Cytochrome bd terminal oxidase subunit II N646_RS00675 PF01654 Cytochrome bd terminal oxidase subunit I N646_RS00690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS00690 PF00672 HAMP domain N646_RS00690 PF17200 Single Cache domain 2 N646_RS00695 PF00529 HlyD membrane-fusion protein of T1SS N646_RS00695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N646_RS00700 PF00873 AcrB/AcrD/AcrF family N646_RS00715 PF00579 tRNA synthetases class I (W and Y) N646_RS00725 PF03372 Endonuclease/Exonuclease/phosphatase family N646_RS00735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS00735 PF00672 HAMP domain N646_RS00740 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N646_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS00750 PF03466 LysR substrate binding domain N646_RS00760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N646_RS00760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N646_RS00765 PF01037 Lrp/AsnC ligand binding domain N646_RS00770 PF17854 FtsK alpha domain N646_RS00770 PF01580 FtsK/SpoIIIE family N646_RS00770 PF09397 Ftsk gamma domain N646_RS00770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N646_RS00775 PF03548 Outer membrane lipoprotein carrier protein LolA N646_RS00780 PF16193 AAA C-terminal domain N646_RS00780 PF12002 MgsA AAA+ ATPase C terminal N646_RS00780 PF00004 ATPase family associated with various cellular activities (AAA) N646_RS00785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N646_RS00785 PF02403 Seryl-tRNA synthetase N-terminal domain N646_RS00790 PF01258 Prokaryotic dksA/traR C4-type zinc finger N646_RS00795 PF00202 Aminotransferase class-III N646_RS00800 PF06968 Biotin and Thiamin Synthesis associated domain N646_RS00800 PF04055 Radical SAM superfamily N646_RS00805 PF00155 Aminotransferase class I and II N646_RS00810 PF08241 Methyltransferase domain N646_RS00820 PF01435 Peptidase family M48 N646_RS00830 PF00106 short chain dehydrogenase N646_RS00855 PF16036 Chalcone isomerase-like N646_RS00865 PF08328 Adenylosuccinate lyase C-terminal N646_RS00865 PF00206 Lyase N646_RS00870 PF04356 Protein of unknown function (DUF489) N646_RS00885 PF00294 pfkB family carbohydrate kinase N646_RS00890 PF00816 H-NS histone family N646_RS00895 PF03553 Na+/H+ antiporter family N646_RS00900 PF02954 Bacterial regulatory protein, Fis family N646_RS00900 PF00072 Response regulator receiver domain N646_RS00900 PF00158 Sigma-54 interaction domain N646_RS00905 PF08029 HisG, C-terminal domain N646_RS00905 PF01634 ATP phosphoribosyltransferase N646_RS00910 PF00815 Histidinol dehydrogenase N646_RS00915 PF00155 Aminotransferase class I and II N646_RS00920 PF08645 Polynucleotide kinase 3 phosphatase N646_RS00920 PF00475 Imidazoleglycerol-phosphate dehydratase N646_RS00925 PF00117 Glutamine amidotransferase class-I N646_RS00930 PF00977 Histidine biosynthesis protein N646_RS00935 PF00977 Histidine biosynthesis protein N646_RS00940 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N646_RS00940 PF01502 Phosphoribosyl-AMP cyclohydrolase N646_RS00945 PF02810 SEC-C motif N646_RS00950 PF08668 HDOD domain N646_RS00950 PF00563 EAL domain N646_RS00955 PF00149 Calcineurin-like phosphoesterase N646_RS00960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N646_RS00965 PF01406 tRNA synthetases class I (C) catalytic domain N646_RS00965 PF09190 DALR domain N646_RS00970 PF00265 Thymidine kinase N646_RS01000 PF01226 Formate/nitrite transporter N646_RS01005 PF03649 Uncharacterised protein family (UPF0014) N646_RS01015 PF03264 NapC/NirT cytochrome c family, N-terminal region N646_RS01020 PF01568 Molydopterin dinucleotide binding domain N646_RS01020 PF18364 Molybdopterin oxidoreductase N-terminal domain N646_RS01020 PF00384 Molybdopterin oxidoreductase N646_RS01025 PF16875 Glycosyl hydrolase family 36 N-terminal domain N646_RS01025 PF16874 Glycosyl hydrolase family 36 C-terminal domain N646_RS01035 PF01368 DHH family N646_RS01035 PF02833 DHHA2 domain N646_RS01045 PF00005 ABC transporter N646_RS01050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS01050 PF00005 ABC transporter N646_RS01055 PF12911 N-terminal TM domain of oligopeptide transport permease C N646_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS01065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N646_RS01070 PF02954 Bacterial regulatory protein, Fis family N646_RS01070 PF00158 Sigma-54 interaction domain N646_RS01075 PF04012 PspA/IM30 family N646_RS01080 PF06667 Phage shock protein B N646_RS01085 PF04024 PspC domain N646_RS01095 PF13533 Biotin-lipoyl like N646_RS01100 PF00873 AcrB/AcrD/AcrF family N646_RS01105 PF03352 Methyladenine glycosylase N646_RS01110 PF03280 Proteobacterial lipase chaperone protein N646_RS01115 PF00561 alpha/beta hydrolase fold N646_RS01120 PF01053 Cys/Met metabolism PLP-dependent enzyme N646_RS01125 PF13091 PLD-like domain N646_RS01125 PF13396 Phospholipase_D-nuclease N-terminal N646_RS01130 PF00209 Sodium:neurotransmitter symporter family N646_RS01135 PF00849 RNA pseudouridylate synthase N646_RS01140 PF01170 Putative RNA methylase family UPF0020 N646_RS01140 PF02926 THUMP domain N646_RS01140 PF10672 S-adenosylmethionine-dependent methyltransferase N646_RS01145 PF00111 2Fe-2S iron-sulfur cluster binding domain N646_RS01145 PF00970 Oxidoreductase FAD-binding domain N646_RS01145 PF00175 Oxidoreductase NAD-binding domain N646_RS01150 PF03063 Prismane/CO dehydrogenase family N646_RS01155 PF01590 GAF domain N646_RS01155 PF00158 Sigma-54 interaction domain N646_RS01165 PF01066 CDP-alcohol phosphatidyltransferase N646_RS01170 PF00005 ABC transporter N646_RS01175 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS01180 PF13416 Bacterial extracellular solute-binding protein N646_RS01190 PF06945 Protein of unknown function (DUF1289) N646_RS01200 PF00149 Calcineurin-like phosphoesterase N646_RS01200 PF02872 5'-nucleotidase, C-terminal domain N646_RS01210 PF01386 Ribosomal L25p family N646_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS01220 PF00486 Transcriptional regulatory protein, C terminal N646_RS01220 PF00072 Response regulator receiver domain N646_RS01235 PF01479 S4 domain N646_RS01235 PF00849 RNA pseudouridylate synthase N646_RS01245 PF07690 Major Facilitator Superfamily N646_RS01255 PF13460 NAD(P)H-binding N646_RS01255 PF11066 Protein of unknown function (DUF2867) N646_RS01260 PF01554 MatE N646_RS01265 PF00005 ABC transporter N646_RS01280 PF06965 Na+/H+ antiporter 1 N646_RS01285 PF16295 Tetracyclin repressor-like, C-terminal domain N646_RS01285 PF00440 Bacterial regulatory proteins, tetR family N646_RS01290 PF02770 Acyl-CoA dehydrogenase, middle domain N646_RS01290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N646_RS01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N646_RS01290 PF09317 Domain of unknown function (DUF1974) N646_RS01295 PF12241 Trans-2-enoyl-CoA reductase catalytic region N646_RS01295 PF07055 Enoyl reductase FAD binding domain N646_RS01295 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N646_RS01300 PF06826 Predicted Permease Membrane Region N646_RS01300 PF02080 TrkA-C domain N646_RS01305 PF00462 Glutaredoxin N646_RS01310 PF00465 Iron-containing alcohol dehydrogenase N646_RS01315 PF01418 Helix-turn-helix domain, rpiR family N646_RS01315 PF01380 SIS domain N646_RS01320 PF00282 Pyridoxal-dependent decarboxylase conserved domain N646_RS01330 PF03956 Lysine exporter LysO N646_RS01340 PF04993 TfoX N-terminal domain N646_RS01340 PF04994 TfoX C-terminal domain N646_RS01355 PF00512 His Kinase A (phospho-acceptor) domain N646_RS01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS01355 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS01365 PF00266 Aminotransferase class-V N646_RS01370 PF00291 Pyridoxal-phosphate dependent enzyme N646_RS01375 PF00005 ABC transporter N646_RS01375 PF00664 ABC transporter transmembrane region N646_RS01380 PF00005 ABC transporter N646_RS01380 PF00664 ABC transporter transmembrane region N646_RS01385 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS01395 PF00266 Aminotransferase class-V N646_RS01405 PF00990 Diguanylate cyclase, GGDEF domain N646_RS01405 PF00072 Response regulator receiver domain N646_RS01410 PF00939 Sodium:sulfate symporter transmembrane region N646_RS01415 PF02698 DUF218 domain N646_RS01420 PF00390 Malic enzyme, N-terminal domain N646_RS01420 PF03949 Malic enzyme, NAD binding domain N646_RS01425 PF00270 DEAD/DEAH box helicase N646_RS01425 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N646_RS01425 PF00271 Helicase conserved C-terminal domain N646_RS01425 PF04408 Helicase associated domain (HA2) N646_RS01425 PF11898 Domain of unknown function (DUF3418) N646_RS01435 PF16655 PhoD-like phosphatase, N-terminal domain N646_RS01435 PF09423 PhoD-like phosphatase N646_RS01440 PF01259 SAICAR synthetase N646_RS01460 PF00691 OmpA family N646_RS01460 PF05736 OprF membrane domain N646_RS01475 PF13183 4Fe-4S dicluster domain N646_RS01475 PF01565 FAD binding domain N646_RS01475 PF02913 FAD linked oxidases, C-terminal domain N646_RS01480 PF04191 Phospholipid methyltransferase N646_RS01490 PF00221 Aromatic amino acid lyase N646_RS01495 PF01175 Urocanase Rossmann-like domain N646_RS01495 PF17391 Urocanase N-terminal domain N646_RS01495 PF17392 Urocanase C-terminal domain N646_RS01500 PF00491 Arginase family N646_RS01505 PF01979 Amidohydrolase family N646_RS01510 PF07702 UTRA domain N646_RS01510 PF00392 Bacterial regulatory proteins, gntR family N646_RS01525 PF03129 Anticodon binding domain N646_RS01525 PF02824 TGS domain N646_RS01525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N646_RS01525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N646_RS01530 PF00707 Translation initiation factor IF-3, C-terminal domain N646_RS01530 PF05198 Translation initiation factor IF-3, N-terminal domain N646_RS01535 PF01632 Ribosomal protein L35 N646_RS01540 PF00453 Ribosomal protein L20 N646_RS01545 PF01906 Putative heavy-metal-binding N646_RS01580 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N646_RS01580 PF01409 tRNA synthetases class II core domain (F) N646_RS01585 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N646_RS01585 PF03147 Ferredoxin-fold anticodon binding domain N646_RS01585 PF01588 Putative tRNA binding domain N646_RS01585 PF03484 tRNA synthetase B5 domain N646_RS01585 PF03483 B3/4 domain N646_RS01595 PF00216 Bacterial DNA-binding protein N646_RS01605 PF05724 Thiopurine S-methyltransferase (TPMT) N646_RS01610 PF02222 ATP-grasp domain N646_RS01615 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region N646_RS01615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N646_RS01620 PF04172 LrgB-like family N646_RS01625 PF03788 LrgA family N646_RS01630 PF00929 Exonuclease N646_RS01630 PF08411 Exonuclease C-terminal N646_RS01635 PF00375 Sodium:dicarboxylate symporter family N646_RS01640 PF13460 NAD(P)H-binding N646_RS01650 PF02654 Cobalamin-5-phosphate synthase N646_RS01655 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N646_RS01670 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N646_RS01675 PF01032 FecCD transport family N646_RS01680 PF00005 ABC transporter N646_RS01700 PF03466 LysR substrate binding domain N646_RS01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS01710 PF01863 Protein of unknown function DUF45 N646_RS01715 PF05971 RNA methyltransferase N646_RS01735 PF00392 Bacterial regulatory proteins, gntR family N646_RS01740 PF00171 Aldehyde dehydrogenase family N646_RS01745 PF05544 Proline racemase N646_RS01750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N646_RS01750 PF01266 FAD dependent oxidoreductase N646_RS01760 PF02423 Ornithine cyclodeaminase/mu-crystallin family N646_RS01765 PF00701 Dihydrodipicolinate synthetase family N646_RS01770 PF00005 ABC transporter N646_RS01770 PF08402 TOBE domain N646_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS01790 PF01752 Collagenase N646_RS01790 PF08453 Peptidase family M9 N-terminal N646_RS01800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS01800 PF00005 ABC transporter N646_RS01805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS01805 PF00005 ABC transporter N646_RS01810 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS01810 PF12911 N-terminal TM domain of oligopeptide transport permease C N646_RS01815 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS01820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N646_RS01825 PF01546 Peptidase family M20/M25/M40 N646_RS01825 PF07687 Peptidase dimerisation domain N646_RS01830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N646_RS01835 PF04209 homogentisate 1,2-dioxygenase N646_RS01845 PF02798 Glutathione S-transferase, N-terminal domain N646_RS01845 PF14497 Glutathione S-transferase, C-terminal domain N646_RS01895 PF07007 Lysozyme inhibitor LprI N646_RS01920 PF02694 Uncharacterised BCR, YnfA/UPF0060 family N646_RS01935 PF03553 Na+/H+ antiporter family N646_RS01940 PF00120 Glutamine synthetase, catalytic domain N646_RS01945 PF07722 Peptidase C26 N646_RS01950 PF07883 Cupin domain N646_RS01950 PF01381 Helix-turn-helix N646_RS01955 PF00171 Aldehyde dehydrogenase family N646_RS01960 PF01266 FAD dependent oxidoreductase N646_RS01965 PF00795 Carbon-nitrogen hydrolase N646_RS01970 PF04371 Porphyromonas-type peptidyl-arginine deiminase N646_RS01975 PF00171 Aldehyde dehydrogenase family N646_RS01980 PF00202 Aminotransferase class-III N646_RS01985 PF12792 CSS motif domain associated with EAL N646_RS01985 PF00563 EAL domain N646_RS01995 PF01047 MarR family N646_RS02000 PF04237 YjbR N646_RS02025 PF00672 HAMP domain N646_RS02025 PF00512 His Kinase A (phospho-acceptor) domain N646_RS02025 PF00072 Response regulator receiver domain N646_RS02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS02025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N646_RS02025 PF01627 Hpt domain N646_RS02030 PF03707 Bacterial signalling protein N terminal repeat N646_RS02030 PF00990 Diguanylate cyclase, GGDEF domain N646_RS02030 PF00563 EAL domain N646_RS02045 PF04204 Homoserine O-succinyltransferase N646_RS02055 PF00893 Small Multidrug Resistance protein N646_RS02060 PF03279 Bacterial lipid A biosynthesis acyltransferase N646_RS02065 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N646_RS02070 PF01810 LysE type translocator N646_RS02080 PF01235 Sodium:alanine symporter family N646_RS02105 PF00884 Sulfatase N646_RS02110 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N646_RS02115 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS02120 PF00005 ABC transporter N646_RS02120 PF00571 CBS domain N646_RS02135 PF02028 BCCT, betaine/carnitine/choline family transporter N646_RS02140 PF00583 Acetyltransferase (GNAT) family N646_RS02145 PF00202 Aminotransferase class-III N646_RS02150 PF06339 Ectoine synthase N646_RS02155 PF13840 ACT domain N646_RS02155 PF00696 Amino acid kinase family N646_RS02160 PF01797 Transposase IS200 like N646_RS02165 PF00884 Sulfatase N646_RS02175 PF03781 Sulfatase-modifying factor enzyme 1 N646_RS02180 PF13186 Iron-sulfur cluster-binding domain N646_RS02180 PF04055 Radical SAM superfamily N646_RS02195 PF00884 Sulfatase N646_RS02215 PF00664 ABC transporter transmembrane region N646_RS02215 PF03412 Peptidase C39 family N646_RS02215 PF00005 ABC transporter N646_RS02225 PF02321 Outer membrane efflux protein N646_RS02240 PF08220 DeoR-like helix-turn-helix domain N646_RS02240 PF00455 DeoR C terminal sensor domain N646_RS02245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N646_RS02245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N646_RS02250 PF03928 Haem-degrading N646_RS02255 PF00072 Response regulator receiver domain N646_RS02255 PF00990 Diguanylate cyclase, GGDEF domain N646_RS02275 PF00939 Sodium:sulfate symporter transmembrane region N646_RS02280 PF00512 His Kinase A (phospho-acceptor) domain N646_RS02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS02285 PF02954 Bacterial regulatory protein, Fis family N646_RS02285 PF00072 Response regulator receiver domain N646_RS02285 PF00158 Sigma-54 interaction domain N646_RS02290 PF00990 Diguanylate cyclase, GGDEF domain N646_RS02290 PF00563 EAL domain N646_RS02290 PF03707 Bacterial signalling protein N terminal repeat N646_RS02295 PF01966 HD domain N646_RS02295 PF11871 Domain of unknown function (DUF3391) N646_RS02300 PF01810 LysE type translocator N646_RS02305 PF11230 Protein of unknown function (DUF3029) N646_RS02310 PF04055 Radical SAM superfamily N646_RS02320 PF03741 Integral membrane protein TerC family N646_RS02330 PF01966 HD domain N646_RS02335 PF00465 Iron-containing alcohol dehydrogenase N646_RS02340 PF03222 Tryptophan/tyrosine permease family N646_RS02345 PF01966 HD domain N646_RS02345 PF11871 Domain of unknown function (DUF3391) N646_RS02355 PF00005 ABC transporter N646_RS02360 PF01497 Periplasmic binding protein N646_RS02365 PF01032 FecCD transport family N646_RS02370 PF07715 TonB-dependent Receptor Plug Domain N646_RS02370 PF00593 TonB dependent receptor N646_RS02380 PF00005 ABC transporter N646_RS02380 PF00664 ABC transporter transmembrane region N646_RS02385 PF00005 ABC transporter N646_RS02385 PF00664 ABC transporter transmembrane region N646_RS02390 PF08334 Type II secretion system (T2SS), protein G N646_RS02390 PF07963 Prokaryotic N-terminal methylation motif N646_RS02400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS02400 PF03466 LysR substrate binding domain N646_RS02410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N646_RS02410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N646_RS02425 PF00012 Hsp70 protein N646_RS02430 PF00012 Hsp70 protein N646_RS02440 PF00990 Diguanylate cyclase, GGDEF domain N646_RS02475 PF02525 Flavodoxin-like fold N646_RS02480 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N646_RS02480 PF00271 Helicase conserved C-terminal domain N646_RS02480 PF04408 Helicase associated domain (HA2) N646_RS02480 PF11898 Domain of unknown function (DUF3418) N646_RS02480 PF00270 DEAD/DEAH box helicase N646_RS02495 PF02028 BCCT, betaine/carnitine/choline family transporter N646_RS02505 PF02397 Bacterial sugar transferase N646_RS02515 PF00534 Glycosyl transferases group 1 N646_RS02515 PF13439 Glycosyltransferase Family 4 N646_RS02545 PF13439 Glycosyltransferase Family 4 N646_RS02545 PF00534 Glycosyl transferases group 1 N646_RS02550 PF00534 Glycosyl transferases group 1 N646_RS02550 PF13439 Glycosyltransferase Family 4 N646_RS02555 PF00072 Response regulator receiver domain N646_RS02555 PF00158 Sigma-54 interaction domain N646_RS02555 PF02954 Bacterial regulatory protein, Fis family N646_RS02570 PF10531 SLBB domain N646_RS02570 PF02563 Polysaccharide biosynthesis/export protein N646_RS02580 PF01740 STAS domain N646_RS02585 PF01068 ATP dependent DNA ligase domain N646_RS02585 PF14743 DNA ligase OB-like domain N646_RS02595 PF01554 MatE N646_RS02600 PF00677 Lumazine binding domain N646_RS02610 PF03881 Fructosamine kinase N646_RS02615 PF00072 Response regulator receiver domain N646_RS02615 PF01339 CheB methylesterase N646_RS02620 PF05230 MASE2 domain N646_RS02620 PF00990 Diguanylate cyclase, GGDEF domain N646_RS02630 PF00877 NlpC/P60 family N646_RS02660 PF03942 DTW domain N646_RS02665 PF00480 ROK family N646_RS02675 PF00994 Probable molybdopterin binding domain N646_RS02675 PF03453 MoeA N-terminal region (domain I and II) N646_RS02675 PF03454 MoeA C-terminal region (domain IV) N646_RS02680 PF12804 MobA-like NTP transferase domain N646_RS02685 PF00005 ABC transporter N646_RS02685 PF08402 TOBE domain N646_RS02690 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS02695 PF12849 PBP superfamily domain N646_RS02700 PF02954 Bacterial regulatory protein, Fis family N646_RS02700 PF00072 Response regulator receiver domain N646_RS02700 PF00158 Sigma-54 interaction domain N646_RS02705 PF00512 His Kinase A (phospho-acceptor) domain N646_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS02705 PF00989 PAS fold N646_RS02710 PF12848 ABC transporter N646_RS02710 PF00005 ABC transporter N646_RS02720 PF02634 FdhD/NarQ family N646_RS02740 PF02613 Nitrate reductase delta subunit N646_RS02750 PF01568 Molydopterin dinucleotide binding domain N646_RS02750 PF00384 Molybdopterin oxidoreductase N646_RS02750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N646_RS02755 PF13247 4Fe-4S dicluster domain N646_RS02770 PF05593 RHS Repeat N646_RS02770 PF03527 RHS protein N646_RS02780 PF00909 Ammonium Transporter Family N646_RS02785 PF02146 Sir2 family N646_RS02790 PF13416 Bacterial extracellular solute-binding protein N646_RS02795 PF13416 Bacterial extracellular solute-binding protein N646_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS02805 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS02810 PF08402 TOBE domain N646_RS02810 PF00005 ABC transporter N646_RS02830 PF01171 PP-loop family N646_RS02835 PF01797 Transposase IS200 like N646_RS02840 PF00582 Universal stress protein family N646_RS02845 PF00027 Cyclic nucleotide-binding domain N646_RS02845 PF13545 Crp-like helix-turn-helix domain N646_RS02860 PF00403 Heavy-metal-associated domain N646_RS02870 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP N646_RS02870 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N646_RS02885 PF00115 Cytochrome C and Quinol oxidase polypeptide I N646_RS02900 PF00072 Response regulator receiver domain N646_RS02900 PF09308 LuxQ, periplasmic N646_RS02900 PF00512 His Kinase A (phospho-acceptor) domain N646_RS02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS02950 PF05707 Zonular occludens toxin (Zot) N646_RS02985 PF06303 MatP N-terminal domain N646_RS02985 PF17414 MatP C-terminal ribbon-helix-helix domain N646_RS02990 PF05362 Lon protease (S16) C-terminal proteolytic domain N646_RS02990 PF13654 AAA domain N646_RS02995 PF07977 FabA-like domain N646_RS03000 PF04957 Ribosome modulation factor N646_RS03010 PF16326 ABC transporter C-terminal domain N646_RS03010 PF00005 ABC transporter N646_RS03010 PF12848 ABC transporter N646_RS03020 PF10672 S-adenosylmethionine-dependent methyltransferase N646_RS03020 PF01170 Putative RNA methylase family UPF0020 N646_RS03020 PF02926 THUMP domain N646_RS03030 PF01180 Dihydroorotate dehydrogenase N646_RS03035 PF05088 Bacterial NAD-glutamate dehydrogenase N646_RS03040 PF11940 Domain of unknown function (DUF3458) Ig-like fold N646_RS03040 PF01433 Peptidase family M1 domain N646_RS03040 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N646_RS03050 PF17804 Tail specific protease N-terminal domain N646_RS03050 PF00595 PDZ domain N646_RS03050 PF11818 C-terminal domain of tail specific protease (DUF3340) N646_RS03050 PF03572 Peptidase family S41 N646_RS03055 PF17516 ProQ C-terminal domain N646_RS03055 PF04352 ProQ/FINO family N646_RS03060 PF13185 GAF domain N646_RS03065 PF00005 ABC transporter N646_RS03065 PF00664 ABC transporter transmembrane region N646_RS03070 PF04403 Paraquat-inducible protein A N646_RS03075 PF02470 MlaD protein N646_RS03080 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF N646_RS03080 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF N646_RS03080 PF01189 16S rRNA methyltransferase RsmB/F N646_RS03100 PF00793 DAHP synthetase I family N646_RS03105 PF04461 Protein of unknown function (DUF520) N646_RS03110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N646_RS03110 PF14824 Sirohaem biosynthesis protein central N646_RS03110 PF10414 Sirohaem synthase dimerisation region N646_RS03115 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS03120 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS03125 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS03130 PF00005 ABC transporter N646_RS03135 PF01027 Inhibitor of apoptosis-promoting Bax1 N646_RS03145 PF04358 DsrC like protein N646_RS03150 PF00708 Acylphosphatase N646_RS03155 PF00672 HAMP domain N646_RS03155 PF17200 Single Cache domain 2 N646_RS03155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS03160 PF10672 S-adenosylmethionine-dependent methyltransferase N646_RS03160 PF17785 PUA-like domain N646_RS03205 PF00691 OmpA family N646_RS03220 PF00691 OmpA family N646_RS03220 PF05736 OprF membrane domain N646_RS03230 PF13185 GAF domain N646_RS03230 PF00990 Diguanylate cyclase, GGDEF domain N646_RS03235 PF09339 IclR helix-turn-helix domain N646_RS03235 PF01614 Bacterial transcriptional regulator N646_RS03245 PF00248 Aldo/keto reductase family N646_RS03250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS03250 PF03466 LysR substrate binding domain N646_RS03260 PF03466 LysR substrate binding domain N646_RS03260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS03265 PF07690 Major Facilitator Superfamily N646_RS03275 PF14765 Polyketide synthase dehydratase N646_RS03275 PF00698 Acyl transferase domain N646_RS03275 PF08240 Alcohol dehydrogenase GroES-like domain N646_RS03275 PF00107 Zinc-binding dehydrogenase N646_RS03275 PF00550 Phosphopantetheine attachment site N646_RS03275 PF16197 Ketoacyl-synthetase C-terminal extension N646_RS03275 PF00109 Beta-ketoacyl synthase, N-terminal domain N646_RS03275 PF08659 KR domain N646_RS03275 PF02801 Beta-ketoacyl synthase, C-terminal domain N646_RS03280 PF12833 Helix-turn-helix domain N646_RS03280 PF02311 AraC-like ligand binding domain N646_RS03285 PF00857 Isochorismatase family N646_RS03290 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS03300 PF08240 Alcohol dehydrogenase GroES-like domain N646_RS03300 PF00107 Zinc-binding dehydrogenase N646_RS03305 PF02574 Homocysteine S-methyltransferase N646_RS03305 PF02310 B12 binding domain N646_RS03305 PF02607 B12 binding domain N646_RS03305 PF02965 Vitamin B12 dependent methionine synthase, activation domain N646_RS03305 PF00809 Pterin binding enzyme N646_RS03310 PF00005 ABC transporter N646_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS03320 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS03330 PF00267 Gram-negative porin N646_RS03335 PF03466 LysR substrate binding domain N646_RS03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS03345 PF00873 AcrB/AcrD/AcrF family N646_RS03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS03350 PF03466 LysR substrate binding domain N646_RS03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS03360 PF03466 LysR substrate binding domain N646_RS03365 PF01810 LysE type translocator N646_RS03375 PF06508 Queuosine biosynthesis protein QueC N646_RS03380 PF04055 Radical SAM superfamily N646_RS03395 PF00089 Trypsin N646_RS03405 PF13193 AMP-binding enzyme C-terminal domain N646_RS03405 PF00501 AMP-binding enzyme N646_RS03405 PF16177 Acetyl-coenzyme A synthetase N-terminus N646_RS03410 PF04303 PrpF protein N646_RS03415 PF00694 Aconitase C-terminal domain N646_RS03415 PF00330 Aconitase family (aconitate hydratase) N646_RS03420 PF00285 Citrate synthase, C-terminal domain N646_RS03450 PF01970 Tripartite tricarboxylate transporter TctA family N646_RS03460 PF01925 Sulfite exporter TauE/SafE N646_RS03465 PF16868 NMT1-like family N646_RS03475 PF01797 Transposase IS200 like N646_RS03480 PF05844 YopD protein N646_RS03490 PF07720 Tetratricopeptide repeat N646_RS03495 PF04792 V antigen (LcrV) protein N646_RS03505 PF09621 Type III secretion system regulator (LcrR) N646_RS03510 PF00771 FHIPEP family N646_RS03530 PF09059 TyeA N646_RS03540 PF18269 T3SS EscN ATPase C-terminal domain N646_RS03540 PF02874 ATP synthase alpha/beta family, beta-barrel domain N646_RS03540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N646_RS03555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N646_RS03560 PF00813 FliP family N646_RS03565 PF01313 Bacterial export proteins, family 3 N646_RS03570 PF01311 Bacterial export proteins, family 1 N646_RS03575 PF01312 FlhB HrpN YscU SpaS Family N646_RS03580 PF12852 Cupin N646_RS03580 PF12833 Helix-turn-helix domain N646_RS03610 PF02661 Fic/DOC family N646_RS03620 PF02108 Flagellar assembly protein FliH N646_RS03630 PF01514 Secretory protein of YscJ/FliF family N646_RS03635 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI N646_RS03645 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) N646_RS03650 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF N646_RS03660 PF16697 Inner membrane component of T3SS, cytoplasmic domain N646_RS03660 PF16693 Inner membrane component of T3SS, periplasmic domain N646_RS03665 PF00263 Bacterial type II and III secretion system protein N646_RS03665 PF03958 Bacterial type II/III secretion system short domain N646_RS03680 PF12833 Helix-turn-helix domain N646_RS03700 PF00171 Aldehyde dehydrogenase family N646_RS03705 PF01590 GAF domain N646_RS03705 PF02954 Bacterial regulatory protein, Fis family N646_RS03705 PF00158 Sigma-54 interaction domain N646_RS03715 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N646_RS03715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N646_RS03720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N646_RS03725 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N646_RS03725 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N646_RS03730 PF02311 AraC-like ligand binding domain N646_RS03730 PF12833 Helix-turn-helix domain N646_RS03735 PF07715 TonB-dependent Receptor Plug Domain N646_RS03735 PF00593 TonB dependent receptor N646_RS03740 PF00072 Response regulator receiver domain N646_RS03740 PF12431 Transcriptional regulator N646_RS03745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N646_RS03745 PF17203 Single cache domain 3 N646_RS03745 PF00989 PAS fold N646_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS03760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N646_RS03775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS03775 PF03466 LysR substrate binding domain N646_RS03790 PF08543 Phosphomethylpyrimidine kinase N646_RS03795 PF00155 Aminotransferase class I and II N646_RS03800 PF06826 Predicted Permease Membrane Region N646_RS03800 PF02080 TrkA-C domain N646_RS03810 PF13533 Biotin-lipoyl like N646_RS03825 PF00135 Carboxylesterase family N646_RS03830 PF13091 PLD-like domain N646_RS03835 PF17243 POTRA domain TamA domain 1 N646_RS03835 PF01103 Surface antigen N646_RS03840 PF11008 Protein of unknown function (DUF2846) N646_RS03845 PF01810 LysE type translocator N646_RS03850 PF01810 LysE type translocator N646_RS03855 PF07237 Protein of unknown function (DUF1428) N646_RS03875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N646_RS03875 PF01411 tRNA synthetases class II (A) N646_RS03880 PF13302 Acetyltransferase (GNAT) domain N646_RS03885 PF12464 Maltose acetyltransferase N646_RS03885 PF14602 Hexapeptide repeat of succinyl-transferase N646_RS03940 PF07690 Major Facilitator Superfamily N646_RS03950 PF01648 4'-phosphopantetheinyl transferase superfamily N646_RS03950 PF17837 4'-phosphopantetheinyl transferase N-terminal domain N646_RS03955 PF00793 DAHP synthetase I family N646_RS03965 PF00425 chorismate binding enzyme N646_RS03970 PF13193 AMP-binding enzyme C-terminal domain N646_RS03970 PF00501 AMP-binding enzyme N646_RS03975 PF00550 Phosphopantetheine attachment site N646_RS03975 PF00857 Isochorismatase family N646_RS03980 PF01497 Periplasmic binding protein N646_RS03985 PF05977 Transmembrane secretion effector N646_RS03990 PF01032 FecCD transport family N646_RS03995 PF01032 FecCD transport family N646_RS04000 PF00005 ABC transporter N646_RS04005 PF00668 Condensation domain N646_RS04005 PF00501 AMP-binding enzyme N646_RS04005 PF13193 AMP-binding enzyme C-terminal domain N646_RS04005 PF00550 Phosphopantetheine attachment site N646_RS04010 PF03621 MbtH-like protein N646_RS04015 PF11806 Domain of unknown function (DUF3327) N646_RS04015 PF00756 Putative esterase N646_RS04020 PF07715 TonB-dependent Receptor Plug Domain N646_RS04040 PF13545 Crp-like helix-turn-helix domain N646_RS04040 PF00027 Cyclic nucleotide-binding domain N646_RS04105 PF00583 Acetyltransferase (GNAT) family N646_RS04120 PF00583 Acetyltransferase (GNAT) family N646_RS04250 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N646_RS04255 PF13333 Integrase core domain N646_RS04255 PF00665 Integrase core domain N646_RS04255 PF13276 HTH-like domain N646_RS04270 PF13276 HTH-like domain N646_RS04270 PF00665 Integrase core domain N646_RS04270 PF13333 Integrase core domain N646_RS04280 PF13599 Pentapeptide repeats (9 copies) N646_RS04285 PF00665 Integrase core domain N646_RS04285 PF13276 HTH-like domain N646_RS04285 PF13333 Integrase core domain N646_RS04410 PF00043 Glutathione S-transferase, C-terminal domain N646_RS04410 PF02798 Glutathione S-transferase, N-terminal domain N646_RS04425 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N646_RS04445 PF00857 Isochorismatase family N646_RS04485 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N646_RS04490 PF13333 Integrase core domain N646_RS04490 PF13276 HTH-like domain N646_RS04490 PF00665 Integrase core domain N646_RS04515 PF00589 Phage integrase family N646_RS04515 PF13495 Phage integrase, N-terminal SAM-like domain N646_RS04530 PF13302 Acetyltransferase (GNAT) domain N646_RS04535 PF18024 Helix-turn-helix domain N646_RS04535 PF00158 Sigma-54 interaction domain N646_RS04540 PF05128 Domain of unknown function (DUF697) N646_RS04545 PF04317 YcjX-like family, DUF463 N646_RS04560 PF04715 Anthranilate synthase component I, N terminal region N646_RS04560 PF00425 chorismate binding enzyme N646_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS04565 PF00512 His Kinase A (phospho-acceptor) domain N646_RS04565 PF09308 LuxQ, periplasmic N646_RS04565 PF00072 Response regulator receiver domain N646_RS04575 PF00293 NUDIX domain N646_RS04580 PF03222 Tryptophan/tyrosine permease family N646_RS04585 PF03313 Serine dehydratase alpha chain N646_RS04585 PF03315 Serine dehydratase beta chain N646_RS04590 PF00563 EAL domain N646_RS04590 PF04940 Sensors of blue-light using FAD N646_RS04600 PF01242 6-pyruvoyl tetrahydropterin synthase N646_RS04610 PF00672 HAMP domain N646_RS04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS04610 PF00512 His Kinase A (phospho-acceptor) domain N646_RS04610 PF01627 Hpt domain N646_RS04610 PF00072 Response regulator receiver domain N646_RS04610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N646_RS04615 PF00990 Diguanylate cyclase, GGDEF domain N646_RS04615 PF00563 EAL domain N646_RS04615 PF03707 Bacterial signalling protein N terminal repeat N646_RS04620 PF17200 Single Cache domain 2 N646_RS04620 PF00672 HAMP domain N646_RS04620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS04625 PF00152 tRNA synthetases class II (D, K and N) N646_RS04625 PF01336 OB-fold nucleic acid binding domain N646_RS04635 PF00392 Bacterial regulatory proteins, gntR family N646_RS04635 PF00155 Aminotransferase class I and II N646_RS04650 PF00155 Aminotransferase class I and II N646_RS04670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS04670 PF00672 HAMP domain N646_RS04670 PF02743 Cache domain N646_RS04675 PF02028 BCCT, betaine/carnitine/choline family transporter N646_RS04685 PF00196 Bacterial regulatory proteins, luxR family N646_RS04685 PF00072 Response regulator receiver domain N646_RS04690 PF07730 Histidine kinase N646_RS04690 PF17200 Single Cache domain 2 N646_RS04695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N646_RS04705 PF03480 Bacterial extracellular solute-binding protein, family 7 N646_RS04720 PF00753 Metallo-beta-lactamase superfamily N646_RS04725 PF05951 Bacterial protein of unknown function (DUF882) N646_RS04730 PF01471 Putative peptidoglycan binding domain N646_RS04730 PF03734 L,D-transpeptidase catalytic domain N646_RS04755 PF00925 GTP cyclohydrolase II N646_RS04765 PF03918 Cytochrome C biogenesis protein N646_RS04770 PF08534 Redoxin N646_RS04775 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N646_RS04775 PF01578 Cytochrome C assembly protein N646_RS04780 PF03916 Polysulphide reductase, NrfD N646_RS04785 PF13247 4Fe-4S dicluster domain N646_RS04795 PF02335 Cytochrome c552 N646_RS04810 PF03989 DNA gyrase C-terminal domain, beta-propeller N646_RS04810 PF00521 DNA gyrase/topoisomerase IV, subunit A N646_RS04820 PF02867 Ribonucleotide reductase, barrel domain N646_RS04820 PF00317 Ribonucleotide reductase, all-alpha domain N646_RS04820 PF03477 ATP cone domain N646_RS04825 PF00268 Ribonucleotide reductase, small chain N646_RS04835 PF00994 Probable molybdopterin binding domain N646_RS04850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N646_RS04855 PF03435 Saccharopine dehydrogenase NADP binding domain N646_RS04855 PF16653 Saccharopine dehydrogenase C-terminal domain N646_RS04860 PF00202 Aminotransferase class-III N646_RS04885 PF01066 CDP-alcohol phosphatidyltransferase N646_RS04890 PF08459 UvrC Helix-hairpin-helix N-terminal N646_RS04890 PF01541 GIY-YIG catalytic domain N646_RS04890 PF02151 UvrB/uvrC motif N646_RS04895 PF00196 Bacterial regulatory proteins, luxR family N646_RS04895 PF00072 Response regulator receiver domain N646_RS04900 PF00136 DNA polymerase family B N646_RS04900 PF03104 DNA polymerase family B, exonuclease domain N646_RS04910 PF08207 Elongation factor P (EF-P) KOW-like domain N646_RS04910 PF01132 Elongation factor P (EF-P) OB domain N646_RS04910 PF09285 Elongation factor P, C-terminal N646_RS04915 PF04269 Protein of unknown function, DUF440 N646_RS04920 PF00849 RNA pseudouridylate synthase N646_RS04920 PF01479 S4 domain N646_RS04930 PF01300 Telomere recombination N646_RS04935 PF02811 PHP domain N646_RS04940 PF08056 Tryptophan operon leader peptide N646_RS04945 PF04715 Anthranilate synthase component I, N terminal region N646_RS04945 PF00425 chorismate binding enzyme N646_RS04950 PF00117 Glutamine amidotransferase class-I N646_RS04955 PF00591 Glycosyl transferase family, a/b domain N646_RS04955 PF02885 Glycosyl transferase family, helical bundle domain N646_RS04960 PF00218 Indole-3-glycerol phosphate synthase N646_RS04960 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N646_RS04965 PF00291 Pyridoxal-phosphate dependent enzyme N646_RS04970 PF00290 Tryptophan synthase alpha chain N646_RS04975 PF00027 Cyclic nucleotide-binding domain N646_RS04975 PF13545 Crp-like helix-turn-helix domain N646_RS04980 PF13193 AMP-binding enzyme C-terminal domain N646_RS04980 PF00501 AMP-binding enzyme N646_RS04990 PF00375 Sodium:dicarboxylate symporter family N646_RS04995 PF17327 Acyl homoserine lactone synthase N646_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS05000 PF00072 Response regulator receiver domain N646_RS05010 PF04279 Intracellular septation protein A N646_RS05015 PF03061 Thioesterase superfamily N646_RS05020 PF03795 YCII-related domain N646_RS05030 PF08267 Cobalamin-independent synthase, N-terminal domain N646_RS05030 PF01717 Cobalamin-independent synthase, Catalytic domain N646_RS05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS05035 PF03466 LysR substrate binding domain N646_RS05050 PF00990 Diguanylate cyclase, GGDEF domain N646_RS05050 PF08447 PAS fold N646_RS05050 PF08448 PAS fold N646_RS05050 PF00563 EAL domain N646_RS05055 PF04055 Radical SAM superfamily N646_RS05055 PF11842 Domain of unknown function (DUF3362) N646_RS05055 PF08497 Radical SAM N-terminal N646_RS05075 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase N646_RS05080 PF00535 Glycosyl transferase family 2 N646_RS05085 PF00486 Transcriptional regulatory protein, C terminal N646_RS05085 PF00072 Response regulator receiver domain N646_RS05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS05090 PF00672 HAMP domain N646_RS05090 PF00512 His Kinase A (phospho-acceptor) domain N646_RS05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS05105 PF03466 LysR substrate binding domain N646_RS05110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N646_RS05110 PF00529 HlyD membrane-fusion protein of T1SS N646_RS05120 PF01717 Cobalamin-independent synthase, Catalytic domain N646_RS05120 PF08267 Cobalamin-independent synthase, N-terminal domain N646_RS05140 PF02687 FtsX-like permease family N646_RS05140 PF12704 MacB-like periplasmic core domain N646_RS05140 PF00005 ABC transporter N646_RS05145 PF12704 MacB-like periplasmic core domain N646_RS05145 PF02687 FtsX-like permease family N646_RS05145 PF00005 ABC transporter N646_RS05150 PF00005 ABC transporter N646_RS05150 PF02687 FtsX-like permease family N646_RS05150 PF12704 MacB-like periplasmic core domain N646_RS05160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N646_RS05180 PF00085 Thioredoxin N646_RS05185 PF02683 Cytochrome C biogenesis protein transmembrane region N646_RS05185 PF11412 Disulphide bond corrector protein DsbC N646_RS05195 PF00072 Response regulator receiver domain N646_RS05195 PF00196 Bacterial regulatory proteins, luxR family N646_RS05200 PF00512 His Kinase A (phospho-acceptor) domain N646_RS05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS05205 PF13247 4Fe-4S dicluster domain N646_RS05210 PF03916 Polysulphide reductase, NrfD N646_RS05215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N646_RS05215 PF00384 Molybdopterin oxidoreductase N646_RS05215 PF01568 Molydopterin dinucleotide binding domain N646_RS05220 PF00034 Cytochrome c N646_RS05225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N646_RS05230 PF04403 Paraquat-inducible protein A N646_RS05235 PF02470 MlaD protein N646_RS05255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N646_RS05260 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N646_RS05265 PF18073 Rubredoxin metal binding domain N646_RS05270 PF06305 Lipopolysaccharide assembly protein A domain N646_RS05275 PF00216 Bacterial DNA-binding protein N646_RS05280 PF00575 S1 RNA binding domain N646_RS05285 PF02224 Cytidylate kinase N646_RS05290 PF08496 Peptidase family S49 N-terminal N646_RS05290 PF01343 Peptidase family S49 N646_RS05295 PF00106 short chain dehydrogenase N646_RS05310 PF02811 PHP domain N646_RS05310 PF07733 Bacterial DNA polymerase III alpha NTPase domain N646_RS05310 PF14579 Helix-hairpin-helix motif N646_RS05310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N646_RS05310 PF01336 OB-fold nucleic acid binding domain N646_RS05315 PF01584 CheW-like domain N646_RS05315 PF00072 Response regulator receiver domain N646_RS05320 PF00480 ROK family N646_RS05325 PF02887 Pyruvate kinase, alpha/beta domain N646_RS05325 PF00224 Pyruvate kinase, barrel domain N646_RS05330 PF01734 Patatin-like phospholipase N646_RS05345 PF00209 Sodium:neurotransmitter symporter family N646_RS05355 PF00367 phosphotransferase system, EIIB N646_RS05355 PF02378 Phosphotransferase system, EIIC N646_RS05360 PF01026 TatD related DNase N646_RS05365 PF09115 DNA polymerase III, delta subunit, C terminal N646_RS05370 PF02223 Thymidylate kinase N646_RS05375 PF02618 YceG-like family N646_RS05380 PF01063 Amino-transferase class IV N646_RS05385 PF00109 Beta-ketoacyl synthase, N-terminal domain N646_RS05385 PF02801 Beta-ketoacyl synthase, C-terminal domain N646_RS05390 PF00550 Phosphopantetheine attachment site N646_RS05400 PF00698 Acyl transferase domain N646_RS05405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N646_RS05405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N646_RS05410 PF02504 Fatty acid synthesis protein N646_RS05415 PF01783 Ribosomal L32p protein family N646_RS05420 PF02620 Large ribosomal RNA subunit accumulation protein YceD N646_RS05425 PF02545 Maf-like protein N646_RS05430 PF00849 RNA pseudouridylate synthase N646_RS05430 PF01479 S4 domain N646_RS05435 PF12111 Polyribonucleotide phosphorylase C terminal N646_RS05435 PF10150 Ribonuclease E/G family N646_RS05435 PF00575 S1 RNA binding domain N646_RS05440 PF00916 Sulfate permease family N646_RS05440 PF01740 STAS domain N646_RS05445 PF01451 Low molecular weight phosphotyrosine protein phosphatase N646_RS05450 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP N646_RS05450 PF12557 Cob(I)alamin adenosyltransferase N terminal N646_RS05460 PF00485 Phosphoribulokinase / Uridine kinase family N646_RS05465 PF10609 NUBPL iron-transfer P-loop NTPase N646_RS05470 PF01588 Putative tRNA binding domain N646_RS05470 PF09334 tRNA synthetases class I (M) N646_RS05480 PF07840 FadR C-terminal domain N646_RS05480 PF00392 Bacterial regulatory proteins, gntR family N646_RS05485 PF06450 Bacterial Na+/H+ antiporter B (NhaB) N646_RS05490 PF02600 Disulfide bond formation protein DsbB N646_RS05495 PF01043 SecA preprotein cross-linking domain N646_RS05495 PF07517 SecA DEAD-like domain N646_RS05495 PF07516 SecA Wing and Scaffold domain N646_RS05495 PF02810 SEC-C motif N646_RS05500 PF01207 Dihydrouridine synthase (Dus) N646_RS05505 PF17158 Membrane-associated sensor, integral membrane domain N646_RS05505 PF00990 Diguanylate cyclase, GGDEF domain N646_RS05510 PF02903 Alpha amylase, N-terminal ig-like domain N646_RS05510 PF00128 Alpha amylase, catalytic domain N646_RS05515 PF00005 ABC transporter N646_RS05520 PF02653 Branched-chain amino acid transport system / permease component N646_RS05530 PF04217 Protein of unknown function, DUF412 N646_RS05535 PF00871 Acetokinase family N646_RS05540 PF07085 DRTGG domain N646_RS05540 PF01515 Phosphate acetyl/butaryl transferase N646_RS05550 PF13409 Glutathione S-transferase, N-terminal domain N646_RS05555 PF00005 ABC transporter N646_RS05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS05560 PF00005 ABC transporter N646_RS05560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS05565 PF12911 N-terminal TM domain of oligopeptide transport permease C N646_RS05565 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS05570 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS05575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N646_RS05580 PF02391 MoaE protein N646_RS05585 PF02597 ThiS family N646_RS05590 PF01967 MoaC family N646_RS05595 PF00994 Probable molybdopterin binding domain N646_RS05600 PF04055 Radical SAM superfamily N646_RS05600 PF06463 Molybdenum Cofactor Synthesis C N646_RS05605 PF01933 Uncharacterised protein family UPF0052 N646_RS05610 PF01627 Hpt domain N646_RS05615 PF00158 Sigma-54 interaction domain N646_RS05615 PF02954 Bacterial regulatory protein, Fis family N646_RS05615 PF00072 Response regulator receiver domain N646_RS05620 PF00271 Helicase conserved C-terminal domain N646_RS05620 PF17757 UvrB interaction domain N646_RS05620 PF12344 Ultra-violet resistance protein B N646_RS05620 PF02151 UvrB/uvrC motif N646_RS05620 PF04851 Type III restriction enzyme, res subunit N646_RS05630 PF02901 Pyruvate formate lyase-like N646_RS05630 PF01228 Glycine radical N646_RS05635 PF02508 Rnf-Nqr subunit, membrane protein N646_RS05640 PF04060 Putative Fe-S cluster N646_RS05645 PF10531 SLBB domain N646_RS05645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N646_RS05645 PF13375 RnfC Barrel sandwich hybrid domain N646_RS05645 PF12838 4Fe-4S dicluster domain N646_RS05650 PF03116 NQR2, RnfD, RnfE family N646_RS05655 PF04205 FMN-binding domain N646_RS05660 PF02508 Rnf-Nqr subunit, membrane protein N646_RS05665 PF10576 Iron-sulfur binding domain of endonuclease III N646_RS05665 PF00633 Helix-hairpin-helix motif N646_RS05665 PF00730 HhH-GPD superfamily base excision DNA repair protein N646_RS05670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N646_RS05675 PF10952 Protein of unknown function (DUF2753) N646_RS05685 PF00929 Exonuclease N646_RS05690 PF03553 Na+/H+ antiporter family N646_RS05690 PF13726 Na+-H+ antiporter family N646_RS05870 PF06892 Phage regulatory protein CII (CP76) N646_RS05905 PF02899 Phage integrase, N-terminal SAM-like domain N646_RS05905 PF00589 Phage integrase family N646_RS05920 PF00462 Glutaredoxin N646_RS05925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N646_RS05925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N646_RS05940 PF00171 Aldehyde dehydrogenase family N646_RS05940 PF00465 Iron-containing alcohol dehydrogenase N646_RS05945 PF01914 MarC family integral membrane protein N646_RS05950 PF00520 Ion transport protein N646_RS05950 PF00027 Cyclic nucleotide-binding domain N646_RS05955 PF02774 Semialdehyde dehydrogenase, dimerisation domain N646_RS05955 PF01118 Semialdehyde dehydrogenase, NAD binding domain N646_RS05960 PF03553 Na+/H+ antiporter family N646_RS05975 PF04245 37-kD nucleoid-associated bacterial protein N646_RS05980 PF07208 Protein of unknown function (DUF1414) N646_RS05985 PF00884 Sulfatase N646_RS05985 PF11893 Domain of unknown function (DUF3413) N646_RS05995 PF00850 Histone deacetylase domain N646_RS06000 PF00106 short chain dehydrogenase N646_RS06010 PF01751 Toprim domain N646_RS06010 PF01131 DNA topoisomerase N646_RS06015 PF00881 Nitroreductase family N646_RS06025 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS06025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N646_RS06030 PF01343 Peptidase family S49 N646_RS06035 PF17763 Glutaminase/Asparaginase C-terminal domain N646_RS06035 PF00710 Asparaginase, N-terminal N646_RS06040 PF07023 Protein of unknown function (DUF1315) N646_RS06050 PF01641 SelR domain N646_RS06055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N646_RS06055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N646_RS06060 PF01263 Aldose 1-epimerase N646_RS06065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS06065 PF08447 PAS fold N646_RS06065 PF13426 PAS domain N646_RS06070 PF13847 Methyltransferase domain N646_RS06085 PF00245 Alkaline phosphatase N646_RS06095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N646_RS06100 PF03992 Antibiotic biosynthesis monooxygenase N646_RS06105 PF05552 Conserved TM helix N646_RS06105 PF00924 Mechanosensitive ion channel N646_RS06110 PF03692 Putative zinc- or iron-chelating domain N646_RS06115 PF04226 Transglycosylase associated protein N646_RS06120 PF03692 Putative zinc- or iron-chelating domain N646_RS06125 PF00230 Major intrinsic protein N646_RS06130 PF13662 Toprim domain N646_RS06130 PF02132 RecR protein N646_RS06135 PF02575 YbaB/EbfC DNA-binding family N646_RS06140 PF12169 DNA polymerase III subunits gamma and tau domain III N646_RS06140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N646_RS06140 PF12170 DNA polymerase III tau subunit V interacting with alpha N646_RS06145 PF00156 Phosphoribosyl transferase domain N646_RS06150 PF04304 Protein of unknown function (DUF454) N646_RS06160 PF00072 Response regulator receiver domain N646_RS06165 PF03466 LysR substrate binding domain N646_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS06170 PF00156 Phosphoribosyl transferase domain N646_RS06175 PF02674 Colicin V production protein N646_RS06180 PF05036 Sporulation related domain N646_RS06185 PF08245 Mur ligase middle domain N646_RS06185 PF02875 Mur ligase family, glutamate ligase domain N646_RS06190 PF17848 Acetyl-coA carboxylase zinc finger domain N646_RS06190 PF01039 Carboxyl transferase domain N646_RS06195 PF01416 tRNA pseudouridine synthase N646_RS06205 PF01118 Semialdehyde dehydrogenase, NAD binding domain N646_RS06205 PF02774 Semialdehyde dehydrogenase, dimerisation domain N646_RS06210 PF11890 Domain of unknown function (DUF3410) N646_RS06210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N646_RS06210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N646_RS06220 PF00109 Beta-ketoacyl synthase, N-terminal domain N646_RS06220 PF02801 Beta-ketoacyl synthase, C-terminal domain N646_RS06225 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N646_RS06225 PF01266 FAD dependent oxidoreductase N646_RS06230 PF03358 NADPH-dependent FMN reductase N646_RS06235 PF08891 YfcL protein N646_RS06240 PF04315 Elongation factor P hydroxylase N646_RS06245 PF03458 UPF0126 domain N646_RS06250 PF01264 Chorismate synthase N646_RS06255 PF05175 Methyltransferase small domain N646_RS06265 PF00300 Histidine phosphatase superfamily (branch 1) N646_RS06270 PF05193 Peptidase M16 inactive domain N646_RS06270 PF00675 Insulinase (Peptidase family M16) N646_RS06270 PF16187 Middle or third domain of peptidase_M16 N646_RS06280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N646_RS06280 PF00378 Enoyl-CoA hydratase/isomerase N646_RS06280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N646_RS06285 PF02803 Thiolase, C-terminal domain N646_RS06285 PF00108 Thiolase, N-terminal domain N646_RS06295 PF04542 Sigma-70 region 2 N646_RS06295 PF08281 Sigma-70, region 4 N646_RS06305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N646_RS06310 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N646_RS06315 PF04333 MlaA lipoprotein N646_RS06320 PF03918 Cytochrome C biogenesis protein N646_RS06325 PF03918 Cytochrome C biogenesis protein N646_RS06330 PF08534 Redoxin N646_RS06335 PF01578 Cytochrome C assembly protein N646_RS06335 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N646_RS06340 PF03100 CcmE N646_RS06345 PF04995 Heme exporter protein D (CcmD) N646_RS06350 PF01578 Cytochrome C assembly protein N646_RS06355 PF03379 CcmB protein N646_RS06360 PF00005 ABC transporter N646_RS06370 PF01584 CheW-like domain N646_RS06380 PF13614 AAA domain N646_RS06385 PF00072 Response regulator receiver domain N646_RS06385 PF01339 CheB methylesterase N646_RS06390 PF02895 Signal transducing histidine kinase, homodimeric domain N646_RS06390 PF01627 Hpt domain N646_RS06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS06390 PF01584 CheW-like domain N646_RS06390 PF00072 Response regulator receiver domain N646_RS06395 PF04344 Chemotaxis phosphatase, CheZ N646_RS06400 PF00072 Response regulator receiver domain N646_RS06405 PF04539 Sigma-70 region 3 N646_RS06405 PF04542 Sigma-70 region 2 N646_RS06405 PF04545 Sigma-70, region 4 N646_RS06410 PF10609 NUBPL iron-transfer P-loop NTPase N646_RS06415 PF00448 SRP54-type protein, GTPase domain N646_RS06420 PF00771 FHIPEP family N646_RS06425 PF01312 FlhB HrpN YscU SpaS Family N646_RS06430 PF01311 Bacterial export proteins, family 1 N646_RS06435 PF01313 Bacterial export proteins, family 3 N646_RS06440 PF00813 FliP family N646_RS06445 PF04347 Flagellar biosynthesis protein, FliO N646_RS06450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N646_RS06455 PF02154 Flagellar motor switch protein FliM N646_RS06455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N646_RS06480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N646_RS06480 PF18269 T3SS EscN ATPase C-terminal domain N646_RS06490 PF01706 FliG C-terminal domain N646_RS06490 PF14841 FliG middle domain N646_RS06490 PF14842 FliG N-terminal domain N646_RS06495 PF01514 Secretory protein of YscJ/FliF family N646_RS06495 PF08345 Flagellar M-ring protein C-terminal N646_RS06500 PF02049 Flagellar hook-basal body complex protein FliE N646_RS06505 PF02954 Bacterial regulatory protein, Fis family N646_RS06505 PF00072 Response regulator receiver domain N646_RS06505 PF00158 Sigma-54 interaction domain N646_RS06510 PF13188 PAS domain N646_RS06510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS06510 PF00512 His Kinase A (phospho-acceptor) domain N646_RS06515 PF02954 Bacterial regulatory protein, Fis family N646_RS06515 PF06490 Flagellar regulatory protein FleQ N646_RS06515 PF00158 Sigma-54 interaction domain N646_RS06520 PF02561 Flagellar protein FliS N646_RS06530 PF07195 Flagellar hook-associated protein 2 C-terminus N646_RS06530 PF07196 Flagellin hook IN motif N646_RS06530 PF02465 Flagellar hook-associated protein 2 N-terminus N646_RS06535 PF03646 FlaG protein N646_RS06540 PF00669 Bacterial flagellin N-terminal helical region N646_RS06540 PF07196 Flagellin hook IN motif N646_RS06540 PF00700 Bacterial flagellin C-terminal helical region N646_RS06545 PF00700 Bacterial flagellin C-terminal helical region N646_RS06545 PF07196 Flagellin hook IN motif N646_RS06545 PF00669 Bacterial flagellin N-terminal helical region N646_RS06550 PF00669 Bacterial flagellin N-terminal helical region N646_RS06550 PF07196 Flagellin hook IN motif N646_RS06550 PF00700 Bacterial flagellin C-terminal helical region N646_RS06555 PF04261 Dyp-type peroxidase family N646_RS06560 PF11143 Protein of unknown function (DUF2919) N646_RS06580 PF03960 ArsC family N646_RS06585 PF01546 Peptidase family M20/M25/M40 N646_RS06585 PF07687 Peptidase dimerisation domain N646_RS06600 PF06804 NlpB/DapX lipoprotein N646_RS06605 PF00701 Dihydrodipicolinate synthetase family N646_RS06615 PF00578 AhpC/TSA family N646_RS06620 PF01594 AI-2E family transporter N646_RS06630 PF13181 Tetratricopeptide repeat N646_RS06630 PF01435 Peptidase family M48 N646_RS06635 PF03960 ArsC family N646_RS06640 PF03358 NADPH-dependent FMN reductase N646_RS06655 PF00860 Permease family N646_RS06665 PF02769 AIR synthase related protein, C-terminal domain N646_RS06665 PF00586 AIR synthase related protein, N-terminal domain N646_RS06670 PF00551 Formyl transferase N646_RS06675 PF13230 Glutamine amidotransferases class-II N646_RS06680 PF13580 SIS domain N646_RS06685 PF09317 Domain of unknown function (DUF1974) N646_RS06685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N646_RS06685 PF02770 Acyl-CoA dehydrogenase, middle domain N646_RS06685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N646_RS06690 PF00916 Sulfate permease family N646_RS06690 PF01740 STAS domain N646_RS06715 PF00929 Exonuclease N646_RS06720 PF00075 RNase H N646_RS06725 PF08241 Methyltransferase domain N646_RS06730 PF16123 Hydroxyacylglutathione hydrolase C-terminus N646_RS06730 PF00753 Metallo-beta-lactamase superfamily N646_RS06735 PF01464 Transglycosylase SLT domain N646_RS06735 PF01476 LysM domain N646_RS06745 PF03372 Endonuclease/Exonuclease/phosphatase family N646_RS06750 PF00543 Nitrogen regulatory protein P-II N646_RS06755 PF00034 Cytochrome c N646_RS06760 PF11734 TilS substrate C-terminal domain N646_RS06760 PF09179 TilS substrate binding domain N646_RS06760 PF01171 PP-loop family N646_RS06765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N646_RS06770 PF14579 Helix-hairpin-helix motif N646_RS06770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N646_RS06770 PF07733 Bacterial DNA polymerase III alpha NTPase domain N646_RS06770 PF01336 OB-fold nucleic acid binding domain N646_RS06770 PF02811 PHP domain N646_RS06775 PF01351 Ribonuclease HII N646_RS06780 PF02684 Lipid-A-disaccharide synthetase N646_RS06785 PF00132 Bacterial transferase hexapeptide (six repeats) N646_RS06785 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N646_RS06790 PF07977 FabA-like domain N646_RS06795 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N646_RS06795 PF00132 Bacterial transferase hexapeptide (six repeats) N646_RS06800 PF03938 Outer membrane protein (OmpH-like) N646_RS06805 PF07244 Surface antigen variable number repeat N646_RS06805 PF01103 Surface antigen N646_RS06810 PF17820 PDZ domain N646_RS06810 PF02163 Peptidase family M50 N646_RS06815 PF13288 DXP reductoisomerase C-terminal domain N646_RS06815 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N646_RS06815 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N646_RS06825 PF01255 Putative undecaprenyl diphosphate synthase N646_RS06830 PF01765 Ribosome recycling factor N646_RS06835 PF00696 Amino acid kinase family N646_RS06840 PF00889 Elongation factor TS N646_RS06845 PF00318 Ribosomal protein S2 N646_RS06850 PF00557 Metallopeptidase family M24 N646_RS06855 PF01909 Nucleotidyltransferase domain N646_RS06855 PF01966 HD domain N646_RS06855 PF08335 GlnD PII-uridylyltransferase N646_RS06855 PF01842 ACT domain N646_RS06860 PF11944 Protein of unknown function (DUF3461) N646_RS06865 PF00849 RNA pseudouridylate synthase N646_RS06870 PF00849 RNA pseudouridylate synthase N646_RS06870 PF04287 tRNA pseudouridine synthase C N646_RS06895 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N646_RS06900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N646_RS06900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N646_RS06905 PF01370 NAD dependent epimerase/dehydratase family N646_RS06930 PF03806 AbgT putative transporter family N646_RS06935 PF01197 Ribosomal protein L31 N646_RS06940 PF01980 tRNA-methyltransferase O N646_RS06940 PF18389 TrmO C-terminal domain N646_RS06945 PF03129 Anticodon binding domain N646_RS06945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N646_RS06945 PF04073 Aminoacyl-tRNA editing domain N646_RS06955 PF06786 Uncharacterised protein family (UPF0253) N646_RS06965 PF00209 Sodium:neurotransmitter symporter family N646_RS06970 PF00704 Glycosyl hydrolases family 18 N646_RS06970 PF06483 Chitinase C N646_RS06980 PF01272 Transcription elongation factor, GreA/GreB, C-term N646_RS06980 PF03449 Transcription elongation factor, N-terminal N646_RS06985 PF00270 DEAD/DEAH box helicase N646_RS06985 PF09382 RQC domain N646_RS06985 PF16124 RecQ zinc-binding N646_RS06985 PF00570 HRDC domain N646_RS06985 PF00271 Helicase conserved C-terminal domain N646_RS06990 PF11799 impB/mucB/samB family C-terminal domain N646_RS06990 PF00817 impB/mucB/samB family N646_RS06990 PF11798 IMS family HHH motif N646_RS07000 PF00072 Response regulator receiver domain N646_RS07000 PF00990 Diguanylate cyclase, GGDEF domain N646_RS07015 PF00111 2Fe-2S iron-sulfur cluster binding domain N646_RS07015 PF00970 Oxidoreductase FAD-binding domain N646_RS07015 PF00175 Oxidoreductase NAD-binding domain N646_RS07020 PF02508 Rnf-Nqr subunit, membrane protein N646_RS07025 PF02508 Rnf-Nqr subunit, membrane protein N646_RS07030 PF04205 FMN-binding domain N646_RS07035 PF03116 NQR2, RnfD, RnfE family N646_RS07040 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) N646_RS07040 PF11973 NQRA C-terminal domain N646_RS07050 PF01722 BolA-like protein N646_RS07055 PF05175 Methyltransferase small domain N646_RS07060 PF03923 Uncharacterized lipoprotein N646_RS07060 PF08139 Prokaryotic membrane lipoprotein lipid attachment site N646_RS07065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N646_RS07070 PF07690 Major Facilitator Superfamily N646_RS07080 PF04542 Sigma-70 region 2 N646_RS07080 PF04545 Sigma-70, region 4 N646_RS07095 PF03502 Nucleoside-specific channel-forming protein, Tsx N646_RS07100 PF02558 Ketopantoate reductase PanE/ApbA N646_RS07100 PF08546 Ketopantoate reductase PanE/ApbA C terminal N646_RS07105 PF01965 DJ-1/PfpI family N646_RS07110 PF00266 Aminotransferase class-V N646_RS07115 PF00990 Diguanylate cyclase, GGDEF domain N646_RS07115 PF17158 Membrane-associated sensor, integral membrane domain N646_RS07120 PF02657 Fe-S metabolism associated domain N646_RS07125 PF00899 ThiF family N646_RS07130 PF03562 MltA specific insert domain N646_RS07130 PF06725 3D domain N646_RS07140 PF00583 Acetyltransferase (GNAT) family N646_RS07140 PF00696 Amino acid kinase family N646_RS07150 PF13538 UvrD-like helicase C-terminal domain N646_RS07155 PF12705 PD-(D/E)XK nuclease superfamily N646_RS07155 PF00580 UvrD/REP helicase N-terminal domain N646_RS07155 PF13361 UvrD-like helicase C-terminal domain N646_RS07165 PF17946 RecC C-terminal domain N646_RS07170 PF00884 Sulfatase N646_RS07170 PF11893 Domain of unknown function (DUF3413) N646_RS07180 PF03466 LysR substrate binding domain N646_RS07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS07185 PF07130 YebG protein N646_RS07200 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle N646_RS07200 PF14602 Hexapeptide repeat of succinyl-transferase N646_RS07205 PF03009 Glycerophosphoryl diester phosphodiesterase family N646_RS07210 PF07690 Major Facilitator Superfamily N646_RS07215 PF00230 Major intrinsic protein N646_RS07220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N646_RS07220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N646_RS07225 PF08220 DeoR-like helix-turn-helix domain N646_RS07225 PF00455 DeoR C terminal sensor domain N646_RS07230 PF01266 FAD dependent oxidoreductase N646_RS07230 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N646_RS07235 PF01544 CorA-like Mg2+ transporter protein N646_RS07240 PF01797 Transposase IS200 like N646_RS07260 PF00356 Bacterial regulatory proteins, lacI family N646_RS07265 PF03466 LysR substrate binding domain N646_RS07265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS07275 PF00196 Bacterial regulatory proteins, luxR family N646_RS07305 PF00501 AMP-binding enzyme N646_RS07310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS07310 PF03466 LysR substrate binding domain N646_RS07315 PF00679 Elongation factor G C-terminus N646_RS07315 PF14492 Elongation Factor G, domain II N646_RS07315 PF03764 Elongation factor G, domain IV N646_RS07315 PF00009 Elongation factor Tu GTP binding domain N646_RS07315 PF03144 Elongation factor Tu domain 2 N646_RS07320 PF18073 Rubredoxin metal binding domain N646_RS07330 PF18429 Domain of unknown function (DUF5609) N646_RS07340 PF01048 Phosphorylase superfamily N646_RS07345 PF01676 Metalloenzyme superfamily N646_RS07350 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N646_RS07350 PF00591 Glycosyl transferase family, a/b domain N646_RS07350 PF02885 Glycosyl transferase family, helical bundle domain N646_RS07355 PF01791 DeoC/LacD family aldolase N646_RS07360 PF07670 Nucleoside recognition N646_RS07360 PF01773 Na+ dependent nucleoside transporter N-terminus N646_RS07360 PF07662 Na+ dependent nucleoside transporter C-terminus N646_RS07365 PF01026 TatD related DNase N646_RS07375 PF03144 Elongation factor Tu domain 2 N646_RS07375 PF16658 Class II release factor RF3, C-terminal domain N646_RS07375 PF00009 Elongation factor Tu GTP binding domain N646_RS07395 PF13508 Acetyltransferase (GNAT) domain N646_RS07400 PF02036 SCP-2 sterol transfer family N646_RS07410 PF00990 Diguanylate cyclase, GGDEF domain N646_RS07410 PF00563 EAL domain N646_RS07410 PF03707 Bacterial signalling protein N terminal repeat N646_RS07415 PF01136 Peptidase family U32 N646_RS07420 PF01136 Peptidase family U32 N646_RS07425 PF01554 MatE N646_RS07435 PF07719 Tetratricopeptide repeat N646_RS07435 PF13181 Tetratricopeptide repeat N646_RS07440 PF03725 3' exoribonuclease family, domain 2 N646_RS07440 PF00013 KH domain N646_RS07440 PF01138 3' exoribonuclease family, domain 1 N646_RS07440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N646_RS07440 PF00575 S1 RNA binding domain N646_RS07445 PF00312 Ribosomal protein S15 N646_RS07450 PF09157 Pseudouridine synthase II TruB, C-terminal N646_RS07450 PF16198 tRNA pseudouridylate synthase B C-terminal domain N646_RS07450 PF01509 TruB family pseudouridylate synthase (N terminal domain) N646_RS07455 PF02033 Ribosome-binding factor A N646_RS07460 PF00009 Elongation factor Tu GTP binding domain N646_RS07460 PF08364 Bacterial translation initiation factor IF-2 associated region N646_RS07460 PF04760 Translation initiation factor IF-2, N-terminal region N646_RS07460 PF11987 Translation-initiation factor 2 N646_RS07465 PF13184 NusA-like KH domain N646_RS07465 PF08529 NusA N-terminal domain N646_RS07465 PF00575 S1 RNA binding domain N646_RS07470 PF17384 RimP C-terminal SH3 domain N646_RS07470 PF02576 RimP N-terminal domain N646_RS07485 PF03840 Preprotein translocase SecG subunit N646_RS07495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N646_RS07495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N646_RS07495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N646_RS07495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N646_RS07500 PF00809 Pterin binding enzyme N646_RS07505 PF00004 ATPase family associated with various cellular activities (AAA) N646_RS07505 PF06480 FtsH Extracellular N646_RS07505 PF01434 Peptidase family M41 N646_RS07505 PF17862 AAA+ lid domain N646_RS07510 PF01728 FtsJ-like methyltransferase N646_RS07515 PF01985 CRS1 / YhbY (CRM) domain N646_RS07520 PF03449 Transcription elongation factor, N-terminal N646_RS07520 PF01272 Transcription elongation factor, GreA/GreB, C-term N646_RS07525 PF13609 Gram-negative porin N646_RS07530 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family N646_RS07540 PF00579 tRNA synthetases class I (W and Y) N646_RS07550 PF00873 AcrB/AcrD/AcrF family N646_RS07560 PF01521 Iron-sulphur cluster biosynthesis N646_RS07565 PF00202 Aminotransferase class-III N646_RS07570 PF01594 AI-2E family transporter N646_RS07575 PF08468 Methyltransferase small domain N-terminal N646_RS07575 PF05175 Methyltransferase small domain N646_RS07580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS07580 PF00072 Response regulator receiver domain N646_RS07580 PF00512 His Kinase A (phospho-acceptor) domain N646_RS07580 PF09308 LuxQ, periplasmic N646_RS07585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N646_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS07595 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS07595 PF12911 N-terminal TM domain of oligopeptide transport permease C N646_RS07600 PF00005 ABC transporter N646_RS07600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS07605 PF00005 ABC transporter N646_RS07605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS07615 PF01869 BadF/BadG/BcrA/BcrD ATPase family N646_RS07620 PF00728 Glycosyl hydrolase family 20, catalytic domain N646_RS07620 PF02838 Glycosyl hydrolase family 20, domain 2 N646_RS07625 PF06165 Glycosyltransferase family 36 N646_RS07625 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain N646_RS07630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N646_RS07630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N646_RS07630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N646_RS07630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N646_RS07635 PF08402 TOBE domain N646_RS07635 PF00005 ABC transporter N646_RS07645 PF13416 Bacterial extracellular solute-binding protein N646_RS07650 PF00909 Ammonium Transporter Family N646_RS07655 PF00543 Nitrogen regulatory protein P-II N646_RS07660 PF06062 Uncharacterised protein family (UPF0231) N646_RS07665 PF00330 Aconitase family (aconitate hydratase) N646_RS07665 PF11791 Aconitate B N-terminal domain N646_RS07665 PF06434 Aconitate hydratase 2 N-terminus N646_RS07670 PF01734 Patatin-like phospholipase N646_RS07675 PF14814 Bifunctional transglycosylase second domain N646_RS07675 PF00905 Penicillin binding protein transpeptidase domain N646_RS07675 PF00912 Transglycosylase N646_RS07680 PF08482 ATP-dependent helicase C-terminal N646_RS07680 PF00271 Helicase conserved C-terminal domain N646_RS07680 PF04408 Helicase associated domain (HA2) N646_RS07680 PF00270 DEAD/DEAH box helicase N646_RS07685 PF17746 SfsA N-terminal OB domain N646_RS07685 PF03749 Sugar fermentation stimulation protein RE domain N646_RS07690 PF01258 Prokaryotic dksA/traR C4-type zinc finger N646_RS07695 PF00749 tRNA synthetases class I (E and Q), catalytic domain N646_RS07700 PF01743 Poly A polymerase head domain N646_RS07700 PF12626 Polymerase A arginine-rich C-terminus N646_RS07700 PF12627 Probable RNA and SrmB- binding site of polymerase A N646_RS07705 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N646_RS07710 PF02548 Ketopantoate hydroxymethyltransferase N646_RS07715 PF02569 Pantoate-beta-alanine ligase N646_RS07720 PF03279 Bacterial lipid A biosynthesis acyltransferase N646_RS07730 PF01061 ABC-2 type transporter N646_RS07735 PF00005 ABC transporter N646_RS07740 PF01740 STAS domain N646_RS07740 PF00916 Sulfate permease family N646_RS07745 PF00484 Carbonic anhydrase N646_RS07750 PF00156 Phosphoribosyl transferase domain N646_RS07755 PF00440 Bacterial regulatory proteins, tetR family N646_RS07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS07760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N646_RS07765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N646_RS07765 PF02817 e3 binding domain N646_RS07765 PF00364 Biotin-requiring enzyme N646_RS07770 PF17831 Pyruvate dehydrogenase E1 component middle domain N646_RS07770 PF00456 Transketolase, thiamine diphosphate binding domain N646_RS07775 PF00392 Bacterial regulatory proteins, gntR family N646_RS07775 PF07729 FCD domain N646_RS07780 PF01510 N-acetylmuramoyl-L-alanine amidase N646_RS07785 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N646_RS07785 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N646_RS07790 PF07963 Prokaryotic N-terminal methylation motif N646_RS07790 PF00114 Pilin (bacterial filament) N646_RS07795 PF00437 Type II/IV secretion system protein N646_RS07795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N646_RS07800 PF00482 Type II secretion system (T2SS), protein F N646_RS07805 PF01478 Type IV leader peptidase family N646_RS07805 PF06750 Bacterial Peptidase A24 N-terminal domain N646_RS07810 PF01121 Dephospho-CoA kinase N646_RS07815 PF07072 Cell division protein N646_RS07820 PF03884 DNA gyrase inhibitor YacG N646_RS07825 PF01245 Ribosomal protein L19 N646_RS07830 PF01746 tRNA (Guanine-1)-methyltransferase N646_RS07835 PF01782 RimM N-terminal domain N646_RS07835 PF05239 PRC-barrel domain N646_RS07840 PF00886 Ribosomal protein S16 N646_RS07845 PF02978 Signal peptide binding domain N646_RS07845 PF02881 SRP54-type protein, helical bundle domain N646_RS07845 PF00448 SRP54-type protein, GTPase domain N646_RS07850 PF01578 Cytochrome C assembly protein N646_RS07855 PF01595 Cyclin M transmembrane N-terminal domain N646_RS07855 PF03471 Transporter associated domain N646_RS07855 PF00571 CBS domain N646_RS07860 PF02664 S-Ribosylhomocysteinase (LuxS) N646_RS07870 PF04262 Glutamate-cysteine ligase N646_RS07875 PF05193 Peptidase M16 inactive domain N646_RS07875 PF00675 Insulinase (Peptidase family M16) N646_RS07880 PF09335 SNARE associated Golgi protein N646_RS07885 PF00107 Zinc-binding dehydrogenase N646_RS07885 PF08240 Alcohol dehydrogenase GroES-like domain N646_RS07890 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N646_RS07895 PF02436 Conserved carboxylase domain N646_RS07895 PF00364 Biotin-requiring enzyme N646_RS07895 PF00682 HMGL-like N646_RS07900 PF04277 Oxaloacetate decarboxylase, gamma chain N646_RS07945 PF02599 Global regulator protein family N646_RS07950 PF13840 ACT domain N646_RS07950 PF01842 ACT domain N646_RS07950 PF00696 Amino acid kinase family N646_RS07955 PF02272 DHHA1 domain N646_RS07955 PF01411 tRNA synthetases class II (A) N646_RS07955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N646_RS07960 PF02631 RecX family N646_RS07965 PF00154 recA bacterial DNA recombination protein N646_RS07970 PF02464 Competence-damaged protein N646_RS07975 PF01624 MutS domain I N646_RS07975 PF05188 MutS domain II N646_RS07975 PF05190 MutS family domain IV N646_RS07975 PF00488 MutS domain V N646_RS07975 PF05192 MutS domain III N646_RS07980 PF00140 Sigma-70 factor, region 1.2 N646_RS07980 PF04542 Sigma-70 region 2 N646_RS07980 PF04539 Sigma-70 region 3 N646_RS07980 PF04545 Sigma-70, region 4 N646_RS07985 PF01476 LysM domain N646_RS07985 PF01551 Peptidase family M23 N646_RS07995 PF01975 Survival protein SurE N646_RS08000 PF01142 tRNA pseudouridine synthase D (TruD) N646_RS08005 PF02542 YgbB family N646_RS08010 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N646_RS08015 PF04977 Septum formation initiator N646_RS08020 PF00113 Enolase, C-terminal TIM barrel domain N646_RS08020 PF03952 Enolase, N-terminal domain N646_RS08025 PF00117 Glutamine amidotransferase class-I N646_RS08025 PF06418 CTP synthase N-terminus N646_RS08030 PF03819 MazG nucleotide pyrophosphohydrolase domain N646_RS08035 PF04607 Region found in RelA / SpoT proteins N646_RS08035 PF02824 TGS domain N646_RS08035 PF13291 ACT domain N646_RS08040 PF01938 TRAM domain N646_RS08040 PF05958 tRNA (Uracil-5-)-methyltransferase N646_RS08045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N646_RS08045 PF00072 Response regulator receiver domain N646_RS08045 PF00672 HAMP domain N646_RS08045 PF01627 Hpt domain N646_RS08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS08045 PF00512 His Kinase A (phospho-acceptor) domain N646_RS08050 PF01648 4'-phosphopantetheinyl transferase superfamily N646_RS08055 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N646_RS08060 PF02565 Recombination protein O C terminal N646_RS08060 PF11967 Recombination protein O N terminal N646_RS08065 PF07650 KH domain N646_RS08065 PF01926 50S ribosome-binding GTPase N646_RS08070 PF14622 Ribonuclease-III-like N646_RS08070 PF00035 Double-stranded RNA binding motif N646_RS08075 PF10502 Signal peptidase, peptidase S26 N646_RS08080 PF06421 GTP-binding protein LepA C-terminus N646_RS08080 PF00679 Elongation factor G C-terminus N646_RS08080 PF03144 Elongation factor Tu domain 2 N646_RS08080 PF00009 Elongation factor Tu GTP binding domain N646_RS08090 PF17188 MucB/RseB C-terminal domain N646_RS08090 PF03888 MucB/RseB N-terminal domain N646_RS08095 PF03872 Anti sigma-E protein RseA, N-terminal domain N646_RS08095 PF03873 Anti sigma-E protein RseA, C-terminal domain N646_RS08100 PF08281 Sigma-70, region 4 N646_RS08100 PF04542 Sigma-70 region 2 N646_RS08105 PF02910 Fumarate reductase flavoprotein C-term N646_RS08105 PF00890 FAD binding domain N646_RS08110 PF03937 Flavinator of succinate dehydrogenase N646_RS08130 PF01494 FAD binding domain N646_RS08135 PF01494 FAD binding domain N646_RS08140 PF03695 Uncharacterised protein family (UPF0149) N646_RS08145 PF05164 Cell division protein ZapA N646_RS08150 PF01812 5-formyltetrahydrofolate cyclo-ligase family N646_RS08155 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N646_RS08160 PF01842 ACT domain N646_RS08160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N646_RS08160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N646_RS08165 PF04402 Protein of unknown function (DUF541) N646_RS08170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS08170 PF03466 LysR substrate binding domain N646_RS08175 PF01810 LysE type translocator N646_RS08185 PF05552 Conserved TM helix N646_RS08185 PF00924 Mechanosensitive ion channel N646_RS08190 PF01116 Fructose-bisphosphate aldolase class-II N646_RS08195 PF00162 Phosphoglycerate kinase N646_RS08200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N646_RS08200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N646_RS08205 PF07715 TonB-dependent Receptor Plug Domain N646_RS08205 PF00593 TonB dependent receptor N646_RS08210 PF03466 LysR substrate binding domain N646_RS08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS08215 PF00456 Transketolase, thiamine diphosphate binding domain N646_RS08215 PF02780 Transketolase, C-terminal domain N646_RS08215 PF02779 Transketolase, pyrimidine binding domain N646_RS08220 PF02773 S-adenosylmethionine synthetase, C-terminal domain N646_RS08220 PF02772 S-adenosylmethionine synthetase, central domain N646_RS08220 PF00438 S-adenosylmethionine synthetase, N-terminal domain N646_RS08230 PF17283 SprT-like zinc ribbon domain N646_RS08230 PF10263 SprT-like family N646_RS08235 PF04231 Endonuclease I N646_RS08240 PF04452 RNA methyltransferase N646_RS08245 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N646_RS08245 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N646_RS08250 PF02622 Uncharacterized ACR, COG1678 N646_RS08255 PF03652 Holliday junction resolvase N646_RS08260 PF00437 Type II/IV secretion system protein N646_RS08265 PF00437 Type II/IV secretion system protein N646_RS08270 PF01168 Alanine racemase, N-terminal domain N646_RS08275 PF14748 Pyrroline-5-carboxylate reductase dimerisation N646_RS08275 PF03807 NADP oxidoreductase coenzyme F420-dependent N646_RS08280 PF02325 YGGT family N646_RS08285 PF02594 Uncharacterised ACR, YggU family COG1872 N646_RS08295 PF01725 Ham1 family N646_RS08300 PF06969 HemN C-terminal domain N646_RS08300 PF04055 Radical SAM superfamily N646_RS08305 PF04960 Glutaminase N646_RS08310 PF02086 D12 class N6 adenine-specific DNA methyltransferase N646_RS08315 PF02390 Putative methyltransferase N646_RS08320 PF14815 NUDIX domain N646_RS08320 PF00730 HhH-GPD superfamily base excision DNA repair protein N646_RS08320 PF00633 Helix-hairpin-helix motif N646_RS08325 PF04362 Bacterial Fe(2+) trafficking N646_RS08330 PF01464 Transglycosylase SLT domain N646_RS08330 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain N646_RS08370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS08370 PF17200 Single Cache domain 2 N646_RS08370 PF00672 HAMP domain N646_RS08400 PF00171 Aldehyde dehydrogenase family N646_RS08450 PF00356 Bacterial regulatory proteins, lacI family N646_RS08455 PF04794 YdjC-like protein N646_RS08460 PF11975 Family 4 glycosyl hydrolase C-terminal domain N646_RS08460 PF02056 Family 4 glycosyl hydrolase N646_RS08465 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N646_RS08470 PF02378 Phosphotransferase system, EIIC N646_RS08475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N646_RS08480 PF01522 Polysaccharide deacetylase N646_RS08495 PF10011 Predicted membrane protein (DUF2254) N646_RS08505 PF03739 Lipopolysaccharide export system permease LptF/LptG N646_RS08510 PF03739 Lipopolysaccharide export system permease LptF/LptG N646_RS08515 PF00883 Cytosol aminopeptidase family, catalytic domain N646_RS08515 PF02789 Cytosol aminopeptidase family, N-terminal domain N646_RS08520 PF04364 DNA polymerase III chi subunit, HolC N646_RS08525 PF08264 Anticodon-binding domain of tRNA N646_RS08525 PF00133 tRNA synthetases class I (I, L, M and V) N646_RS08525 PF10458 Valyl tRNA synthetase tRNA binding arm N646_RS08535 PF00583 Acetyltransferase (GNAT) family N646_RS08545 PF06877 Regulator of ribonuclease activity B N646_RS08555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N646_RS08555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N646_RS08565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N646_RS08565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N646_RS08570 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain N646_RS08570 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain N646_RS08575 PF01042 Endoribonuclease L-PSP N646_RS08580 PF01553 Acyltransferase N646_RS08585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N646_RS08590 PF01722 BolA-like protein N646_RS08600 PF05494 MlaC protein N646_RS08605 PF02470 MlaD protein N646_RS08610 PF02405 Permease MlaE N646_RS08615 PF00005 ABC transporter N646_RS08620 PF01699 Sodium/calcium exchanger protein N646_RS08625 PF00571 CBS domain N646_RS08625 PF01380 SIS domain N646_RS08635 PF03968 OstA-like protein N646_RS08640 PF12399 Branched-chain amino acid ATP-binding cassette transporter N646_RS08640 PF00005 ABC transporter N646_RS08645 PF00309 Sigma-54 factor, Activator interacting domain (AID) N646_RS08645 PF04552 Sigma-54, DNA binding domain N646_RS08645 PF04963 Sigma-54 factor, core binding domain N646_RS08650 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N646_RS08655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N646_RS08660 PF03668 P-loop ATPase protein family N646_RS08665 PF00381 PTS HPr component phosphorylation site N646_RS08670 PF00571 CBS domain N646_RS08670 PF01769 Divalent cation transporter N646_RS08670 PF03448 MgtE intracellular N domain N646_RS08675 PF01523 Putative modulator of DNA gyrase N646_RS08680 PF04751 Protein of unknown function (DUF615) N646_RS08685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N646_RS08685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N646_RS08690 PF00849 RNA pseudouridylate synthase N646_RS08700 PF18337 RapA N-terminal Tudor like domain N646_RS08700 PF00271 Helicase conserved C-terminal domain N646_RS08700 PF18339 RapA N-terminal Tudor like domain 1 N646_RS08700 PF12137 RNA polymerase recycling family C-terminal N646_RS08700 PF00176 SNF2 family N-terminal domain N646_RS08705 PF02562 PhoH-like protein N646_RS08705 PF13638 PIN domain N646_RS08710 PF01523 Putative modulator of DNA gyrase N646_RS08715 PF00795 Carbon-nitrogen hydrolase N646_RS08720 PF13116 Protein of unknown function N646_RS08720 PF13502 AsmA-like C-terminal region N646_RS08725 PF00575 S1 RNA binding domain N646_RS08725 PF10150 Ribonuclease E/G family N646_RS08730 PF02545 Maf-like protein N646_RS08735 PF04093 rod shape-determining protein MreD N646_RS08740 PF04085 rod shape-determining protein MreC N646_RS08780 PF07963 Prokaryotic N-terminal methylation motif N646_RS08790 PF00482 Type II secretion system (T2SS), protein F N646_RS08795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N646_RS08795 PF00437 Type II/IV secretion system protein N646_RS08805 PF01471 Putative peptidoglycan binding domain N646_RS08805 PF13401 AAA domain N646_RS08810 PF03958 Bacterial type II/III secretion system short domain N646_RS08810 PF00263 Bacterial type II and III secretion system protein N646_RS08830 PF00990 Diguanylate cyclase, GGDEF domain N646_RS08830 PF17157 Gammaproteobacterial periplasmic sensor domain N646_RS08830 PF00563 EAL domain N646_RS08835 PF00436 Single-strand binding protein family N646_RS08840 PF00196 Bacterial regulatory proteins, luxR family N646_RS08845 PF00483 Nucleotidyl transferase N646_RS08850 PF00005 ABC transporter N646_RS08850 PF17755 UvrA DNA-binding domain N646_RS08850 PF17760 UvrA interaction domain N646_RS08860 PF00266 Aminotransferase class-V N646_RS08870 PF00696 Amino acid kinase family N646_RS08870 PF01842 ACT domain N646_RS08875 PF02607 B12 binding domain N646_RS08875 PF02310 B12 binding domain N646_RS08875 PF00809 Pterin binding enzyme N646_RS08875 PF02574 Homocysteine S-methyltransferase N646_RS08875 PF02965 Vitamin B12 dependent methionine synthase, activation domain N646_RS08880 PF00999 Sodium/hydrogen exchanger family N646_RS08955 PF01507 Phosphoadenosine phosphosulfate reductase family N646_RS08960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N646_RS08960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N646_RS08965 PF00258 Flavodoxin N646_RS08965 PF00667 FAD binding domain N646_RS08965 PF00175 Oxidoreductase NAD-binding domain N646_RS08985 PF01207 Dihydrouridine synthase (Dus) N646_RS08990 PF01475 Ferric uptake regulator family N646_RS09000 PF00342 Phosphoglucose isomerase N646_RS09005 PF01894 Uncharacterised protein family UPF0047 N646_RS09010 PF00842 Alanine racemase, C-terminal domain N646_RS09010 PF01168 Alanine racemase, N-terminal domain N646_RS09015 PF03796 DnaB-like helicase C terminal domain N646_RS09015 PF00772 DnaB-like helicase N terminal domain N646_RS09025 PF01281 Ribosomal protein L9, N-terminal domain N646_RS09025 PF03948 Ribosomal protein L9, C-terminal domain N646_RS09030 PF01084 Ribosomal protein S18 N646_RS09035 PF00436 Single-strand binding protein family N646_RS09040 PF01250 Ribosomal protein S6 N646_RS09045 PF00834 Ribulose-phosphate 3 epimerase family N646_RS09050 PF02086 D12 class N6 adenine-specific DNA methyltransferase N646_RS09060 PF01761 3-dehydroquinate synthase N646_RS09065 PF01202 Shikimate kinase N646_RS09070 PF07660 Secretin and TonB N terminus short domain N646_RS09070 PF11741 AMIN domain N646_RS09070 PF03958 Bacterial type II/III secretion system short domain N646_RS09070 PF00263 Bacterial type II and III secretion system protein N646_RS09075 PF04351 Pilus assembly protein, PilP N646_RS09095 PF00905 Penicillin binding protein transpeptidase domain N646_RS09095 PF17092 Penicillin-binding protein OB-like domain N646_RS09095 PF00912 Transglycosylase N646_RS09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS09100 PF03466 LysR substrate binding domain N646_RS09105 PF08534 Redoxin N646_RS09105 PF00462 Glutaredoxin N646_RS09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS09110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N646_RS09120 PF14698 Argininosuccinate lyase C-terminal N646_RS09120 PF00583 Acetyltransferase (GNAT) family N646_RS09120 PF00206 Lyase N646_RS09125 PF00764 Arginosuccinate synthase N646_RS09130 PF00696 Amino acid kinase family N646_RS09135 PF01118 Semialdehyde dehydrogenase, NAD binding domain N646_RS09135 PF02774 Semialdehyde dehydrogenase, dimerisation domain N646_RS09140 PF07687 Peptidase dimerisation domain N646_RS09140 PF01546 Peptidase family M20/M25/M40 N646_RS09145 PF00311 Phosphoenolpyruvate carboxylase N646_RS09155 PF02219 Methylenetetrahydrofolate reductase N646_RS09160 PF03447 Homoserine dehydrogenase, NAD binding domain N646_RS09160 PF00742 Homoserine dehydrogenase N646_RS09160 PF00696 Amino acid kinase family N646_RS09165 PF01053 Cys/Met metabolism PLP-dependent enzyme N646_RS09170 PF01340 Met Apo-repressor, MetJ N646_RS09175 PF03949 Malic enzyme, NAD binding domain N646_RS09175 PF00390 Malic enzyme, N-terminal domain N646_RS09180 PF00210 Ferritin-like domain N646_RS09185 PF04324 BFD-like [2Fe-2S] binding domain N646_RS09190 PF03143 Elongation factor Tu C-terminal domain N646_RS09190 PF03144 Elongation factor Tu domain 2 N646_RS09190 PF00009 Elongation factor Tu GTP binding domain N646_RS09195 PF03764 Elongation factor G, domain IV N646_RS09195 PF00679 Elongation factor G C-terminus N646_RS09195 PF14492 Elongation Factor G, domain II N646_RS09195 PF00009 Elongation factor Tu GTP binding domain N646_RS09195 PF03144 Elongation factor Tu domain 2 N646_RS09200 PF00177 Ribosomal protein S7p/S5e N646_RS09205 PF00164 Ribosomal protein S12/S23 N646_RS09210 PF04077 DsrH like protein N646_RS09215 PF02635 DsrE/DsrF-like family N646_RS09220 PF02635 DsrE/DsrF-like family N646_RS09225 PF13309 HTH domain N646_RS09225 PF08348 YheO-like PAS domain N646_RS09230 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N646_RS09230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N646_RS09240 PF04102 SlyX N646_RS09245 PF01112 Asparaginase N646_RS09250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N646_RS09260 PF02254 TrkA-N domain N646_RS09260 PF00999 Sodium/hydrogen exchanger family N646_RS09265 PF02525 Flavodoxin-like fold N646_RS09270 PF12848 ABC transporter N646_RS09270 PF00005 ABC transporter N646_RS09280 PF00561 alpha/beta hydrolase fold N646_RS09285 PF06794 Uncharacterised protein family (UPF0270) N646_RS09290 PF00485 Phosphoribulokinase / Uridine kinase family N646_RS09295 PF00027 Cyclic nucleotide-binding domain N646_RS09295 PF13545 Crp-like helix-turn-helix domain N646_RS09305 PF00171 Aldehyde dehydrogenase family N646_RS09310 PF04958 Arginine N-succinyltransferase beta subunit N646_RS09315 PF00202 Aminotransferase class-III N646_RS09320 PF00117 Glutamine amidotransferase class-I N646_RS09335 PF00579 tRNA synthetases class I (W and Y) N646_RS09340 PF13419 Haloacid dehalogenase-like hydrolase N646_RS09345 PF00588 SpoU rRNA Methylase family N646_RS09345 PF08032 RNA 2'-O ribose methyltransferase substrate binding N646_RS09350 PF08461 Ribonuclease R winged-helix domain N646_RS09350 PF17876 Cold shock domain N646_RS09350 PF08206 Ribonuclease B OB domain N646_RS09350 PF00575 S1 RNA binding domain N646_RS09350 PF00773 RNB domain N646_RS09355 PF02082 Transcriptional regulator N646_RS09360 PF00042 Globin N646_RS09360 PF00970 Oxidoreductase FAD-binding domain N646_RS09360 PF00175 Oxidoreductase NAD-binding domain N646_RS09365 PF08238 Sel1 repeat N646_RS09370 PF00709 Adenylosuccinate synthetase N646_RS09375 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) N646_RS09380 PF01145 SPFH domain / Band 7 family N646_RS09385 PF01145 SPFH domain / Band 7 family N646_RS09385 PF12221 Bacterial membrane protein N terminal N646_RS09390 PF16360 GTP-binding GTPase Middle Region N646_RS09390 PF13167 GTP-binding GTPase N-terminal N646_RS09390 PF01926 50S ribosome-binding GTPase N646_RS09395 PF17209 Hfq protein N646_RS09405 PF01119 DNA mismatch repair protein, C-terminal domain N646_RS09405 PF08676 MutL C terminal dimerisation domain N646_RS09410 PF01520 N-acetylmuramoyl-L-alanine amidase N646_RS09415 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N646_RS09420 PF08331 Domain of unknown function (DUF1730) N646_RS09475 PF00929 Exonuclease N646_RS09480 PF03193 RsgA GTPase N646_RS09485 PF02666 Phosphatidylserine decarboxylase N646_RS09490 PF03600 Citrate transporter N646_RS09490 PF02080 TrkA-C domain N646_RS09500 PF01676 Metalloenzyme superfamily N646_RS09500 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N646_RS09505 PF00581 Rhodanese-like domain N646_RS09510 PF02556 Preprotein translocase subunit SecB N646_RS09515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N646_RS09515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N646_RS09520 PF00132 Bacterial transferase hexapeptide (six repeats) N646_RS09520 PF06426 Serine acetyltransferase, N-terminal N646_RS09525 PF01551 Peptidase family M23 N646_RS09535 PF08360 QacR-like protein, C-terminal region N646_RS09535 PF00440 Bacterial regulatory proteins, tetR family N646_RS09545 PF00152 tRNA synthetases class II (D, K and N) N646_RS09550 PF00890 FAD binding domain N646_RS09550 PF02910 Fumarate reductase flavoprotein C-term N646_RS09555 PF13085 2Fe-2S iron-sulfur cluster binding domain N646_RS09555 PF13183 4Fe-4S dicluster domain N646_RS09560 PF02300 Fumarate reductase subunit C N646_RS09565 PF02313 Fumarate reductase subunit D N646_RS09575 PF09285 Elongation factor P, C-terminal N646_RS09575 PF01132 Elongation factor P (EF-P) OB domain N646_RS09575 PF08207 Elongation factor P (EF-P) KOW-like domain N646_RS09580 PF04055 Radical SAM superfamily N646_RS09585 PF02308 MgtC family N646_RS09595 PF00118 TCP-1/cpn60 chaperonin family N646_RS09600 PF00166 Chaperonin 10 Kd subunit N646_RS09605 PF01554 MatE N646_RS09610 PF01797 Transposase IS200 like N646_RS09615 PF00365 Phosphofructokinase N646_RS09620 PF01545 Cation efflux family N646_RS09620 PF16916 Dimerisation domain of Zinc Transporter N646_RS09625 PF07813 LTXXQ motif family protein N646_RS09630 PF00486 Transcriptional regulatory protein, C terminal N646_RS09630 PF00072 Response regulator receiver domain N646_RS09635 PF00512 His Kinase A (phospho-acceptor) domain N646_RS09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS09635 PF00672 HAMP domain N646_RS09635 PF16527 Two-component sensor protein CpxA, periplasmic domain N646_RS09640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N646_RS09640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N646_RS09645 PF00588 SpoU rRNA Methylase family N646_RS09650 PF04186 FxsA cytoplasmic membrane protein N646_RS09655 PF10415 Fumarase C C-terminus N646_RS09655 PF00206 Lyase N646_RS09660 PF03605 Anaerobic c4-dicarboxylate membrane transporter N646_RS09665 PF11412 Disulphide bond corrector protein DsbC N646_RS09665 PF02683 Cytochrome C biogenesis protein transmembrane region N646_RS09670 PF00196 Bacterial regulatory proteins, luxR family N646_RS09670 PF00072 Response regulator receiver domain N646_RS09675 PF02080 TrkA-C domain N646_RS09675 PF03471 Transporter associated domain N646_RS09675 PF00999 Sodium/hydrogen exchanger family N646_RS09685 PF00474 Sodium:solute symporter family N646_RS09700 PF00206 Lyase N646_RS09700 PF10415 Fumarase C C-terminus N646_RS09705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS09705 PF00072 Response regulator receiver domain N646_RS09705 PF00512 His Kinase A (phospho-acceptor) domain N646_RS09705 PF09308 LuxQ, periplasmic N646_RS09710 PF12832 MFS_1 like family N646_RS09725 PF16177 Acetyl-coenzyme A synthetase N-terminus N646_RS09725 PF00501 AMP-binding enzyme N646_RS09725 PF13193 AMP-binding enzyme C-terminal domain N646_RS09730 PF01220 Dehydroquinase class II N646_RS09735 PF00364 Biotin-requiring enzyme N646_RS09740 PF00289 Biotin carboxylase, N-terminal domain N646_RS09740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N646_RS09740 PF02785 Biotin carboxylase C-terminal domain N646_RS09750 PF01207 Dihydrouridine synthase (Dus) N646_RS09755 PF02954 Bacterial regulatory protein, Fis family N646_RS09765 PF00005 ABC transporter N646_RS09765 PF12848 ABC transporter N646_RS09825 PF01276 Orn/Lys/Arg decarboxylase, major domain N646_RS09825 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N646_RS09825 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N646_RS09830 PF13520 Amino acid permease N646_RS09835 PF00486 Transcriptional regulatory protein, C terminal N646_RS09835 PF18500 CadC C-terminal domain 1 N646_RS09840 PF13411 MerR HTH family regulatory protein N646_RS09845 PF02142 MGS-like domain N646_RS09845 PF01808 AICARFT/IMPCHase bienzyme N646_RS09850 PF02844 Phosphoribosylglycinamide synthetase, N domain N646_RS09850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N646_RS09850 PF02843 Phosphoribosylglycinamide synthetase, C domain N646_RS09860 PF00216 Bacterial DNA-binding protein N646_RS09865 PF01595 Cyclin M transmembrane N-terminal domain N646_RS09865 PF00571 CBS domain N646_RS09870 PF04222 Protein of unknown function (DUF416) N646_RS09875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N646_RS09880 PF03167 Uracil DNA glycosylase superfamily N646_RS09885 PF01208 Uroporphyrinogen decarboxylase (URO-D) N646_RS09890 PF00293 NUDIX domain N646_RS09890 PF09297 NADH pyrophosphatase zinc ribbon domain N646_RS09895 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ N646_RS09900 PF04983 RNA polymerase Rpb1, domain 3 N646_RS09900 PF00623 RNA polymerase Rpb1, domain 2 N646_RS09900 PF04997 RNA polymerase Rpb1, domain 1 N646_RS09900 PF05000 RNA polymerase Rpb1, domain 4 N646_RS09900 PF04998 RNA polymerase Rpb1, domain 5 N646_RS09905 PF04563 RNA polymerase beta subunit N646_RS09905 PF04561 RNA polymerase Rpb2, domain 2 N646_RS09905 PF00562 RNA polymerase Rpb2, domain 6 N646_RS09905 PF10385 RNA polymerase beta subunit external 1 domain N646_RS09905 PF04565 RNA polymerase Rpb2, domain 3 N646_RS09905 PF04560 RNA polymerase Rpb2, domain 7 N646_RS09910 PF16320 Ribosomal protein L7/L12 dimerisation domain N646_RS09910 PF00542 Ribosomal protein L7/L12 C-terminal domain N646_RS09915 PF00466 Ribosomal protein L10 N646_RS09920 PF00687 Ribosomal protein L1p/L10e family N646_RS09925 PF00298 Ribosomal protein L11, RNA binding domain N646_RS09925 PF03946 Ribosomal protein L11, N-terminal domain N646_RS09930 PF00467 KOW motif N646_RS09930 PF02357 Transcription termination factor nusG N646_RS09935 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N646_RS09940 PF03144 Elongation factor Tu domain 2 N646_RS09940 PF03143 Elongation factor Tu C-terminal domain N646_RS09940 PF00009 Elongation factor Tu GTP binding domain N646_RS09965 PF00485 Phosphoribulokinase / Uridine kinase family N646_RS09970 PF02237 Biotin protein ligase C terminal domain N646_RS09970 PF08279 HTH domain N646_RS09970 PF03099 Biotin/lipoate A/B protein ligase family N646_RS09975 PF01565 FAD binding domain N646_RS09975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N646_RS09985 PF13091 PLD-like domain N646_RS10025 PF01177 Asp/Glu/Hydantoin racemase N646_RS10035 PF00593 TonB dependent receptor N646_RS10035 PF07715 TonB-dependent Receptor Plug Domain N646_RS10040 PF05958 tRNA (Uracil-5-)-methyltransferase N646_RS10080 PF06803 Protein of unknown function (DUF1232) N646_RS10105 PF12161 HsdM N-terminal domain N646_RS10105 PF02384 N-6 DNA Methylase N646_RS10110 PF01420 Type I restriction modification DNA specificity domain N646_RS10125 PF12008 Type I restriction and modification enzyme - subunit R C terminal N646_RS10125 PF18766 SWI2/SNF2 ATPase N646_RS10125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N646_RS10140 PF00440 Bacterial regulatory proteins, tetR family N646_RS10145 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS10145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N646_RS10150 PF01554 MatE N646_RS10155 PF04072 Leucine carboxyl methyltransferase N646_RS10160 PF00717 Peptidase S24-like N646_RS10160 PF01726 LexA DNA binding domain N646_RS10165 PF01553 Acyltransferase N646_RS10170 PF01040 UbiA prenyltransferase family N646_RS10175 PF04345 Chorismate lyase N646_RS10180 PF03748 Flagellar basal body-associated protein FliL N646_RS10185 PF01694 Rhomboid family N646_RS10185 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease N646_RS10190 PF00581 Rhodanese-like domain N646_RS10195 PF00140 Sigma-70 factor, region 1.2 N646_RS10195 PF04542 Sigma-70 region 2 N646_RS10195 PF04545 Sigma-70, region 4 N646_RS10200 PF18075 FtsX extracellular domain N646_RS10205 PF00005 ABC transporter N646_RS10210 PF02881 SRP54-type protein, helical bundle domain N646_RS10210 PF00448 SRP54-type protein, GTPase domain N646_RS10225 PF01914 MarC family integral membrane protein N646_RS10245 PF10694 Protein of unknown function (DUF2500) N646_RS10265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N646_RS10265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N646_RS10270 PF01022 Bacterial regulatory protein, arsR family N646_RS10275 PF08668 HDOD domain N646_RS10275 PF00563 EAL domain N646_RS10280 PF01810 LysE type translocator N646_RS10285 PF12146 Serine aminopeptidase, S33 N646_RS10305 PF03942 DTW domain N646_RS10310 PF10442 FIST C domain N646_RS10310 PF08495 FIST N domain N646_RS10310 PF00563 EAL domain N646_RS10310 PF00990 Diguanylate cyclase, GGDEF domain N646_RS10315 PF13419 Haloacid dehalogenase-like hydrolase N646_RS10320 PF00589 Phage integrase family N646_RS10320 PF02899 Phage integrase, N-terminal SAM-like domain N646_RS10330 PF01678 Diaminopimelate epimerase N646_RS10335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N646_RS10335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N646_RS10345 PF01491 Frataxin-like domain N646_RS10350 PF12633 Adenylate cyclase NT domain N646_RS10350 PF01295 Adenylate cyclase, class-I N646_RS10355 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N646_RS10355 PF03900 Porphobilinogen deaminase, C-terminal domain N646_RS10360 PF02602 Uroporphyrinogen-III synthase HemD N646_RS10365 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase N646_RS10370 PF07219 HemY protein N-terminus N646_RS10410 PF00175 Oxidoreductase NAD-binding domain N646_RS10415 PF00111 2Fe-2S iron-sulfur cluster binding domain N646_RS10420 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N646_RS10430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N646_RS10430 PF07497 Rho termination factor, RNA-binding domain N646_RS10430 PF07498 Rho termination factor, N-terminal domain N646_RS10435 PF00085 Thioredoxin N646_RS10440 PF00271 Helicase conserved C-terminal domain N646_RS10440 PF00270 DEAD/DEAH box helicase N646_RS10445 PF02541 Ppx/GppA phosphatase family N646_RS10455 PF02592 Putative vitamin uptake transporter N646_RS10465 PF00570 HRDC domain N646_RS10465 PF09382 RQC domain N646_RS10465 PF00271 Helicase conserved C-terminal domain N646_RS10465 PF16124 RecQ zinc-binding N646_RS10465 PF00270 DEAD/DEAH box helicase N646_RS10470 PF00892 EamA-like transporter family N646_RS10480 PF01810 LysE type translocator N646_RS10490 PF00580 UvrD/REP helicase N-terminal domain N646_RS10490 PF13361 UvrD-like helicase C-terminal domain N646_RS10500 PF05114 Protein of unknown function (DUF692) N646_RS10520 PF07690 Major Facilitator Superfamily N646_RS10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS10525 PF03466 LysR substrate binding domain N646_RS10530 PF00557 Metallopeptidase family M24 N646_RS10530 PF01321 Creatinase/Prolidase N-terminal domain N646_RS10530 PF00557 Metallopeptidase family M24 N646_RS10530 PF01321 Creatinase/Prolidase N-terminal domain N646_RS10535 PF06968 Biotin and Thiamin Synthesis associated domain N646_RS10535 PF04055 Radical SAM superfamily N646_RS10540 PF05690 Thiazole biosynthesis protein ThiG N646_RS10545 PF02597 ThiS family N646_RS10550 PF00899 ThiF family N646_RS10555 PF02581 Thiamine monophosphate synthase N646_RS10560 PF01964 Radical SAM ThiC family N646_RS10560 PF13667 ThiC-associated domain N646_RS10565 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N646_RS10570 PF07731 Multicopper oxidase N646_RS10570 PF07732 Multicopper oxidase N646_RS10570 PF00394 Multicopper oxidase N646_RS10615 PF00132 Bacterial transferase hexapeptide (six repeats) N646_RS10620 PF07369 Protein of unknown function (DUF1488) N646_RS10625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N646_RS10625 PF01488 Shikimate / quinate 5-dehydrogenase N646_RS10625 PF08501 Shikimate dehydrogenase substrate binding domain N646_RS10630 PF01218 Coproporphyrinogen III oxidase N646_RS10635 PF01300 Telomere recombination N646_RS10640 PF00731 AIR carboxylase N646_RS10645 PF02222 ATP-grasp domain N646_RS10645 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N646_RS10650 PF01396 Topoisomerase DNA binding C4 zinc finger N646_RS10655 PF04361 Protein of unknown function (DUF494) N646_RS10660 PF17782 DprA winged helix domain N646_RS10660 PF02481 DNA recombination-mediator protein A N646_RS10670 PF01327 Polypeptide deformylase N646_RS10675 PF02911 Formyl transferase, C-terminal domain N646_RS10675 PF00551 Formyl transferase N646_RS10680 PF01189 16S rRNA methyltransferase RsmB/F N646_RS10680 PF01029 NusB family N646_RS10685 PF02254 TrkA-N domain N646_RS10685 PF02080 TrkA-C domain N646_RS10690 PF02386 Cation transport protein N646_RS10700 PF03006 Haemolysin-III related N646_RS10705 PF07070 SpoOM protein N646_RS10710 PF06288 Protein of unknown function (DUF1040) N646_RS10715 PF12801 4Fe-4S binding domain N646_RS10715 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase N646_RS10715 PF13746 4Fe-4S dicluster domain N646_RS10720 PF01636 Phosphotransferase enzyme family N646_RS10725 PF01323 DSBA-like thioredoxin domain N646_RS10730 PF01553 Acyltransferase N646_RS10740 PF13335 Magnesium chelatase, subunit ChlI C-terminal N646_RS10740 PF01078 Magnesium chelatase, subunit ChlI N646_RS10745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N646_RS10745 PF00205 Thiamine pyrophosphate enzyme, central domain N646_RS10745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N646_RS10755 PF01063 Amino-transferase class IV N646_RS10760 PF00920 Dehydratase family N646_RS10765 PF00585 C-terminal regulatory domain of Threonine dehydratase N646_RS10765 PF00291 Pyridoxal-phosphate dependent enzyme N646_RS10770 PF03466 LysR substrate binding domain N646_RS10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS10775 PF07690 Major Facilitator Superfamily N646_RS10780 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS10785 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS10790 PF00132 Bacterial transferase hexapeptide (six repeats) N646_RS10790 PF12804 MobA-like NTP transferase domain N646_RS10795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain N646_RS10795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N646_RS10800 PF02874 ATP synthase alpha/beta family, beta-barrel domain N646_RS10800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N646_RS10805 PF00231 ATP synthase N646_RS10810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N646_RS10810 PF02874 ATP synthase alpha/beta family, beta-barrel domain N646_RS10810 PF00306 ATP synthase alpha/beta chain, C terminal domain N646_RS10815 PF00213 ATP synthase delta (OSCP) subunit N646_RS10820 PF00430 ATP synthase B/B' CF(0) N646_RS10825 PF00137 ATP synthase subunit C N646_RS10830 PF00119 ATP synthase A chain N646_RS10835 PF03899 ATP synthase I chain N646_RS10840 PF02195 ParB-like nuclease domain N646_RS10840 PF17762 HTH domain found in ParB protein N646_RS10845 PF13614 AAA domain N646_RS10850 PF02527 rRNA small subunit methyltransferase G N646_RS10855 PF01134 Glucose inhibited division protein A N646_RS10855 PF13932 GidA associated domain N646_RS10860 PF00258 Flavodoxin N646_RS10865 PF01926 50S ribosome-binding GTPase N646_RS10865 PF12631 MnmE helical domain N646_RS10865 PF10396 GTP-binding protein TrmE N-terminus N646_RS10870 PF14849 YidC periplasmic domain N646_RS10870 PF02096 60Kd inner membrane protein N646_RS10875 PF00825 Ribonuclease P N646_RS10880 PF00468 Ribosomal protein L34 N646_RS10885 PF00005 ABC transporter N646_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS10895 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS10900 PF11638 DnaA N-terminal domain N646_RS10900 PF08299 Bacterial dnaA protein helix-turn-helix N646_RS10900 PF00308 Bacterial dnaA protein N646_RS10905 PF02767 DNA polymerase III beta subunit, central domain N646_RS10905 PF00712 DNA polymerase III beta subunit, N-terminal domain N646_RS10905 PF02768 DNA polymerase III beta subunit, C-terminal domain N646_RS10910 PF02463 RecF/RecN/SMC N terminal domain N646_RS10915 PF01751 Toprim domain N646_RS10915 PF18053 DNA gyrase B subunit insert domain N646_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS10915 PF00204 DNA gyrase B N646_RS10915 PF00986 DNA gyrase B subunit, carboxyl terminus N646_RS10920 PF01797 Transposase IS200 like N646_RS10935 PF00011 Hsp20/alpha crystallin family N646_RS10940 PF00155 Aminotransferase class I and II N646_RS10945 PF00128 Alpha amylase, catalytic domain N646_RS10950 PF05746 DALR anticodon binding domain N646_RS10950 PF02092 Glycyl-tRNA synthetase beta subunit N646_RS10955 PF02091 Glycyl-tRNA synthetase alpha subunit N646_RS10960 PF01169 Uncharacterized protein family UPF0016 N646_RS10970 PF01206 Sulfurtransferase TusA N646_RS10980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS10980 PF03466 LysR substrate binding domain N646_RS10985 PF00107 Zinc-binding dehydrogenase N646_RS10985 PF08240 Alcohol dehydrogenase GroES-like domain N646_RS10990 PF02803 Thiolase, C-terminal domain N646_RS10990 PF00108 Thiolase, N-terminal domain N646_RS10995 PF00378 Enoyl-CoA hydratase/isomerase N646_RS10995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N646_RS10995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N646_RS11000 PF09186 Domain of unknown function (DUF1949) N646_RS11000 PF01205 Uncharacterized protein family UPF0029 N646_RS11005 PF02386 Cation transport protein N646_RS11010 PF12724 Flavodoxin domain N646_RS11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS11040 PF03466 LysR substrate binding domain N646_RS11045 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N646_RS11045 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N646_RS11050 PF04380 Membrane fusogenic activity N646_RS11055 PF00873 AcrB/AcrD/AcrF family N646_RS11060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N646_RS11065 PF16295 Tetracyclin repressor-like, C-terminal domain N646_RS11065 PF00440 Bacterial regulatory proteins, tetR family N646_RS11070 PF00580 UvrD/REP helicase N-terminal domain N646_RS11070 PF13361 UvrD-like helicase C-terminal domain N646_RS11075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N646_RS11105 PF13419 Haloacid dehalogenase-like hydrolase N646_RS11110 PF00005 ABC transporter N646_RS11110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS11115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N646_RS11120 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS11125 PF12911 N-terminal TM domain of oligopeptide transport permease C N646_RS11125 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS11155 PF00069 Protein kinase domain N646_RS11160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N646_RS11160 PF00356 Bacterial regulatory proteins, lacI family N646_RS11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS11165 PF03466 LysR substrate binding domain N646_RS11170 PF00893 Small Multidrug Resistance protein N646_RS11175 PF00893 Small Multidrug Resistance protein N646_RS11180 PF00920 Dehydratase family N646_RS11185 PF01202 Shikimate kinase N646_RS11190 PF02447 GntP family permease N646_RS11195 PF01081 KDPG and KHG aldolase N646_RS11200 PF01048 Phosphorylase superfamily N646_RS11205 PF03466 LysR substrate binding domain N646_RS11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS11245 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS11245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N646_RS11250 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N646_RS11255 PF01432 Peptidase family M3 N646_RS11260 PF01037 Lrp/AsnC ligand binding domain N646_RS11265 PF08448 PAS fold N646_RS11265 PF00990 Diguanylate cyclase, GGDEF domain N646_RS11265 PF00563 EAL domain N646_RS11270 PF04445 Putative SAM-dependent methyltransferase N646_RS11280 PF00892 EamA-like transporter family N646_RS11285 PF00582 Universal stress protein family N646_RS11290 PF00210 Ferritin-like domain N646_RS11295 PF10625 Universal stress protein B (UspB) N646_RS11305 PF00158 Sigma-54 interaction domain N646_RS11305 PF02954 Bacterial regulatory protein, Fis family N646_RS11305 PF01590 GAF domain N646_RS11330 PF00781 Diacylglycerol kinase catalytic domain N646_RS11360 PF01594 AI-2E family transporter N646_RS11365 PF00990 Diguanylate cyclase, GGDEF domain N646_RS11365 PF00563 EAL domain N646_RS11365 PF03707 Bacterial signalling protein N terminal repeat N646_RS11375 PF02646 RmuC family N646_RS11380 PF01209 ubiE/COQ5 methyltransferase family N646_RS11385 PF02036 SCP-2 sterol transfer family N646_RS11390 PF03109 ABC1 family N646_RS11395 PF02416 mttA/Hcf106 family N646_RS11400 PF02416 mttA/Hcf106 family N646_RS11405 PF00902 Sec-independent protein translocase protein (TatC) N646_RS11410 PF13276 HTH-like domain N646_RS11410 PF13333 Integrase core domain N646_RS11410 PF00665 Integrase core domain N646_RS11420 PF01026 TatD related DNase N646_RS11425 PF00490 Delta-aminolevulinic acid dehydratase N646_RS11430 PF00583 Acetyltransferase (GNAT) family N646_RS11435 PF01367 5'-3' exonuclease, C-terminal SAM fold N646_RS11435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N646_RS11435 PF01612 3'-5' exonuclease N646_RS11435 PF00476 DNA polymerase family A N646_RS11440 PF01926 50S ribosome-binding GTPase N646_RS11445 PF00034 Cytochrome c N646_RS11455 PF04220 Der GTPase activator (YihI) N646_RS11460 PF10675 Protein of unknown function (DUF2489) N646_RS11465 PF04055 Radical SAM superfamily N646_RS11465 PF06969 HemN C-terminal domain N646_RS11470 PF00962 Adenosine/AMP deaminase N646_RS11475 PF00563 EAL domain N646_RS11475 PF00990 Diguanylate cyclase, GGDEF domain N646_RS11475 PF03707 Bacterial signalling protein N terminal repeat N646_RS11480 PF02954 Bacterial regulatory protein, Fis family N646_RS11480 PF00158 Sigma-54 interaction domain N646_RS11480 PF00072 Response regulator receiver domain N646_RS11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS11485 PF00512 His Kinase A (phospho-acceptor) domain N646_RS11485 PF00989 PAS fold N646_RS11495 PF03951 Glutamine synthetase, beta-Grasp domain N646_RS11495 PF00120 Glutamine synthetase, catalytic domain N646_RS11500 PF03144 Elongation factor Tu domain 2 N646_RS11500 PF00009 Elongation factor Tu GTP binding domain N646_RS11500 PF00679 Elongation factor G C-terminus N646_RS11505 PF08299 Bacterial dnaA protein helix-turn-helix N646_RS11505 PF00308 Bacterial dnaA protein N646_RS11515 PF03631 Virulence factor BrkB N646_RS11520 PF02580 D-Tyr-tRNA(Tyr) deacylase N646_RS11525 PF00583 Acetyltransferase (GNAT) family N646_RS11525 PF09500 Putative thioesterase (yiiD_Cterm) N646_RS11535 PF01293 Phosphoenolpyruvate carboxykinase N646_RS11540 PF01430 Hsp33 protein N646_RS11545 PF01479 S4 domain N646_RS11550 PF11356 Type II secretion system protein C N646_RS11555 PF00263 Bacterial type II and III secretion system protein N646_RS11555 PF03958 Bacterial type II/III secretion system short domain N646_RS11560 PF00437 Type II/IV secretion system protein N646_RS11565 PF00482 Type II secretion system (T2SS), protein F N646_RS11570 PF07963 Prokaryotic N-terminal methylation motif N646_RS11570 PF08334 Type II secretion system (T2SS), protein G N646_RS11575 PF12019 Type II transport protein GspH N646_RS11580 PF02501 Type II secretion system (T2SS), protein I N646_RS11580 PF07963 Prokaryotic N-terminal methylation motif N646_RS11585 PF07963 Prokaryotic N-terminal methylation motif N646_RS11585 PF11612 Type II secretion system (T2SS), protein J N646_RS11590 PF03934 Type II secretion system (T2SS), protein K N646_RS11595 PF05134 Type II secretion system (T2SS), protein L N646_RS11595 PF12693 GspL periplasmic domain N646_RS11600 PF04612 Type II secretion system (T2SS), protein M N646_RS11605 PF01203 Type II secretion system (T2SS), protein N N646_RS11610 PF00459 Inositol monophosphatase family N646_RS11615 PF00293 NUDIX domain N646_RS11620 PF01106 NifU-like domain N646_RS11620 PF01521 Iron-sulphur cluster biosynthesis N646_RS11625 PF00156 Phosphoribosyl transferase domain N646_RS11630 PF00561 alpha/beta hydrolase fold N646_RS11640 PF16921 Tex protein YqgF-like domain N646_RS11640 PF09371 Tex-like protein N-terminal domain N646_RS11640 PF17674 HHH domain N646_RS11640 PF00575 S1 RNA binding domain N646_RS11650 PF03449 Transcription elongation factor, N-terminal N646_RS11650 PF01272 Transcription elongation factor, GreA/GreB, C-term N646_RS11660 PF00072 Response regulator receiver domain N646_RS11660 PF00486 Transcriptional regulatory protein, C terminal N646_RS11665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS11665 PF00672 HAMP domain N646_RS11665 PF00512 His Kinase A (phospho-acceptor) domain N646_RS11670 PF00860 Permease family N646_RS11675 PF17191 RecG wedge domain N646_RS11675 PF00271 Helicase conserved C-terminal domain N646_RS11675 PF00270 DEAD/DEAH box helicase N646_RS11680 PF12105 SpoU, rRNA methylase, C-terminal N646_RS11680 PF00588 SpoU rRNA Methylase family N646_RS11685 PF13291 ACT domain N646_RS11685 PF04607 Region found in RelA / SpoT proteins N646_RS11685 PF02824 TGS domain N646_RS11695 PF00625 Guanylate kinase N646_RS11710 PF02472 Biopolymer transport protein ExbD/TolR N646_RS11715 PF01618 MotA/TolQ/ExbB proton channel family N646_RS11730 PF00593 TonB dependent receptor N646_RS11730 PF07715 TonB-dependent Receptor Plug Domain N646_RS11735 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS11740 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS11740 PF12911 N-terminal TM domain of oligopeptide transport permease C N646_RS11745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N646_RS11750 PF00005 ABC transporter N646_RS11750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS11755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N646_RS11755 PF00005 ABC transporter N646_RS11765 PF08340 Domain of unknown function (DUF1732) N646_RS11765 PF03755 YicC-like family, N-terminal region N646_RS11770 PF03725 3' exoribonuclease family, domain 2 N646_RS11770 PF01138 3' exoribonuclease family, domain 1 N646_RS11775 PF00156 Phosphoribosyl transferase domain N646_RS11780 PF03279 Bacterial lipid A biosynthesis acyltransferase N646_RS11785 PF00440 Bacterial regulatory proteins, tetR family N646_RS11790 PF02441 Flavoprotein N646_RS11790 PF04127 DNA / pantothenate metabolism flavoprotein N646_RS11795 PF17200 Single Cache domain 2 N646_RS11795 PF00672 HAMP domain N646_RS11795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS11800 PF04002 RadC-like JAB domain N646_RS11805 PF00830 Ribosomal L28 family N646_RS11810 PF00471 Ribosomal protein L33 N646_RS11820 PF06827 Zinc finger found in FPG and IleRS N646_RS11820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N646_RS11820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N646_RS11825 PF01467 Cytidylyltransferase-like N646_RS11830 PF05686 Glycosyl transferase family 90 N646_RS11835 PF00535 Glycosyl transferase family 2 N646_RS11840 PF00535 Glycosyl transferase family 2 N646_RS11845 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N646_RS11850 PF01219 Prokaryotic diacylglycerol kinase N646_RS11860 PF16363 GDP-mannose 4,6 dehydratase N646_RS11865 PF00483 Nucleotidyl transferase N646_RS11870 PF05523 WxcM-like, C-terminal N646_RS11880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N646_RS11905 PF07836 DmpG-like communication domain N646_RS11905 PF00682 HMGL-like N646_RS11910 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N646_RS11915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N646_RS11925 PF03279 Bacterial lipid A biosynthesis acyltransferase N646_RS11930 PF01370 NAD dependent epimerase/dehydratase family N646_RS11935 PF06082 Exopolysaccharide biosynthesis protein YbjH N646_RS11960 PF10531 SLBB domain N646_RS11960 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N646_RS11960 PF02563 Polysaccharide biosynthesis/export protein N646_RS11970 PF01943 Polysaccharide biosynthesis protein N646_RS11985 PF13439 Glycosyltransferase Family 4 N646_RS11985 PF00534 Glycosyl transferases group 1 N646_RS11995 PF13439 Glycosyltransferase Family 4 N646_RS11995 PF00534 Glycosyl transferases group 1 N646_RS12005 PF00535 Glycosyl transferase family 2 N646_RS12010 PF02397 Bacterial sugar transferase N646_RS12020 PF00953 Glycosyl transferase family 4 N646_RS12025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N646_RS12030 PF01565 FAD binding domain N646_RS12030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N646_RS12050 PF00534 Glycosyl transferases group 1 N646_RS12050 PF13439 Glycosyltransferase Family 4 N646_RS12070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N646_RS12070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N646_RS12070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N646_RS12075 PF01370 NAD dependent epimerase/dehydratase family N646_RS12080 PF00483 Nucleotidyl transferase N646_RS12085 PF00121 Triosephosphate isomerase N646_RS12095 PF05656 Protein of unknown function (DUF805) N646_RS12110 PF00455 DeoR C terminal sensor domain N646_RS12110 PF08220 DeoR-like helix-turn-helix domain N646_RS12115 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N646_RS12120 PF06005 Cell division protein ZapB N646_RS12125 PF03737 Aldolase/RraA N646_RS12130 PF01040 UbiA prenyltransferase family N646_RS12135 PF00004 ATPase family associated with various cellular activities (AAA) N646_RS12135 PF07724 AAA domain (Cdc48 subfamily) N646_RS12140 PF00227 Proteasome subunit N646_RS12150 PF00356 Bacterial regulatory proteins, lacI family N646_RS12155 PF18074 Primosomal protein N C-terminal domain N646_RS12155 PF00271 Helicase conserved C-terminal domain N646_RS12155 PF00270 DEAD/DEAH box helicase N646_RS12155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N646_RS12155 PF17764 3′ DNA-binding domain (3′BD) N646_RS12160 PF01197 Ribosomal protein L31 N646_RS12165 PF00338 Ribosomal protein S10p/S20e N646_RS12170 PF00297 Ribosomal protein L3 N646_RS12175 PF00573 Ribosomal protein L4/L1 family N646_RS12180 PF00276 Ribosomal protein L23 N646_RS12185 PF03947 Ribosomal Proteins L2, C-terminal domain N646_RS12185 PF00181 Ribosomal Proteins L2, RNA binding domain N646_RS12190 PF00203 Ribosomal protein S19 N646_RS12195 PF00237 Ribosomal protein L22p/L17e N646_RS12200 PF00189 Ribosomal protein S3, C-terminal domain N646_RS12200 PF07650 KH domain N646_RS12205 PF00252 Ribosomal protein L16p/L10e N646_RS12210 PF00831 Ribosomal L29 protein N646_RS12215 PF00366 Ribosomal protein S17 N646_RS12220 PF00238 Ribosomal protein L14p/L23e N646_RS12225 PF00467 KOW motif N646_RS12225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N646_RS12230 PF00673 ribosomal L5P family C-terminus N646_RS12230 PF00281 Ribosomal protein L5 N646_RS12235 PF00253 Ribosomal protein S14p/S29e N646_RS12240 PF00410 Ribosomal protein S8 N646_RS12245 PF00347 Ribosomal protein L6 N646_RS12250 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N646_RS12255 PF00333 Ribosomal protein S5, N-terminal domain N646_RS12255 PF03719 Ribosomal protein S5, C-terminal domain N646_RS12260 PF00327 Ribosomal protein L30p/L7e N646_RS12265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N646_RS12270 PF00344 SecY translocase N646_RS12275 PF00444 Ribosomal protein L36 N646_RS12280 PF00416 Ribosomal protein S13/S18 N646_RS12285 PF00411 Ribosomal protein S11 N646_RS12290 PF01479 S4 domain N646_RS12290 PF00163 Ribosomal protein S4/S9 N-terminal domain N646_RS12295 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N646_RS12295 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N646_RS12295 PF01000 RNA polymerase Rpb3/RpoA insert domain N646_RS12300 PF01196 Ribosomal protein L17 N646_RS12310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N646_RS12310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N646_RS12320 PF13673 Acetyltransferase (GNAT) domain N646_RS12325 PF00271 Helicase conserved C-terminal domain N646_RS12325 PF03880 DbpA RNA binding domain N646_RS12325 PF00270 DEAD/DEAH box helicase N646_RS12335 PF02872 5'-nucleotidase, C-terminal domain N646_RS12335 PF00149 Calcineurin-like phosphoesterase N646_RS12340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N646_RS12340 PF10414 Sirohaem synthase dimerisation region N646_RS12340 PF14824 Sirohaem biosynthesis protein central N646_RS12345 PF01507 Phosphoadenosine phosphosulfate reductase family N646_RS12350 PF00009 Elongation factor Tu GTP binding domain N646_RS12355 PF02080 TrkA-C domain N646_RS12355 PF03600 Citrate transporter N646_RS12380 PF00005 ABC transporter N646_RS12390 PF10795 Protein of unknown function (DUF2607) N646_RS12395 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) N646_RS12400 PF06526 Protein of unknown function (DUF1107) N646_RS12405 PF01625 Peptide methionine sulfoxide reductase N646_RS12410 PF01103 Surface antigen N646_RS12410 PF07244 Surface antigen variable number repeat N646_RS12410 PF17243 POTRA domain TamA domain 1 N646_RS12415 PF04357 TamB, inner membrane protein subunit of TAM complex N646_RS12420 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like N646_RS12430 PF00719 Inorganic pyrophosphatase N646_RS12435 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N646_RS12440 PF01225 Mur ligase family, catalytic domain N646_RS12440 PF08245 Mur ligase middle domain N646_RS12440 PF02875 Mur ligase family, glutamate ligase domain N646_RS12445 PF02441 Flavoprotein N646_RS12455 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS12460 PF00005 ABC transporter N646_RS12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS12465 PF03466 LysR substrate binding domain N646_RS12470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N646_RS12485 PF16868 NMT1-like family N646_RS12490 PF01316 Arginine repressor, DNA binding domain N646_RS12490 PF02863 Arginine repressor, C-terminal domain N646_RS12495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N646_RS12495 PF00056 lactate/malate dehydrogenase, NAD binding domain N646_RS12505 PF00348 Polyprenyl synthetase N646_RS12510 PF00829 Ribosomal prokaryotic L21 protein N646_RS12515 PF01016 Ribosomal L27 protein N646_RS12520 PF01018 GTP1/OBG N646_RS12520 PF01926 50S ribosome-binding GTPase N646_RS12525 PF06738 Putative threonine/serine exporter N646_RS12530 PF12821 Threonine/Serine exporter, ThrE N646_RS12535 PF00186 Dihydrofolate reductase N646_RS12540 PF00149 Calcineurin-like phosphoesterase N646_RS12545 PF04379 ApaG domain N646_RS12550 PF00398 Ribosomal RNA adenine dimethylase N646_RS12555 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N646_RS12560 PF09312 SurA N-terminal domain N646_RS12565 PF03968 OstA-like protein N646_RS12565 PF04453 LPS transport system D N646_RS12570 PF05099 Tellurite resistance protein TerB N646_RS12570 PF00226 DnaJ domain N646_RS12580 PF00694 Aconitase C-terminal domain N646_RS12585 PF00330 Aconitase family (aconitate hydratase) N646_RS12590 PF00180 Isocitrate/isopropylmalate dehydrogenase N646_RS12595 PF08502 LeuA allosteric (dimerisation) domain N646_RS12595 PF00682 HMGL-like N646_RS12605 PF01569 PAP2 superfamily N646_RS12615 PF03466 LysR substrate binding domain N646_RS12615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS12620 PF00501 AMP-binding enzyme N646_RS12625 PF00205 Thiamine pyrophosphate enzyme, central domain N646_RS12625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N646_RS12625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N646_RS12630 PF10369 Small subunit of acetolactate synthase N646_RS12635 PF00990 Diguanylate cyclase, GGDEF domain N646_RS12645 PF02887 Pyruvate kinase, alpha/beta domain N646_RS12645 PF00224 Pyruvate kinase, barrel domain N646_RS12650 PF08220 DeoR-like helix-turn-helix domain N646_RS12650 PF00455 DeoR C terminal sensor domain N646_RS12655 PF01380 SIS domain N646_RS12660 PF00465 Iron-containing alcohol dehydrogenase N646_RS12665 PF02733 Dak1 domain N646_RS12670 PF02734 DAK2 domain N646_RS12675 PF05524 PEP-utilising enzyme, N-terminal N646_RS12675 PF00391 PEP-utilising enzyme, mobile domain N646_RS12675 PF02896 PEP-utilising enzyme, TIM barrel domain N646_RS12680 PF02954 Bacterial regulatory protein, Fis family N646_RS12680 PF00158 Sigma-54 interaction domain N646_RS12680 PF00989 PAS fold N646_RS12685 PF05068 Mannitol repressor N646_RS12690 PF08125 Mannitol dehydrogenase C-terminal domain N646_RS12690 PF01232 Mannitol dehydrogenase Rossmann domain N646_RS12695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N646_RS12695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N646_RS12695 PF02378 Phosphotransferase system, EIIC N646_RS12715 PF03180 NLPA lipoprotein N646_RS12725 PF03979 Sigma-70 factor, region 1.1 N646_RS12725 PF00140 Sigma-70 factor, region 1.2 N646_RS12725 PF04545 Sigma-70, region 4 N646_RS12725 PF04542 Sigma-70 region 2 N646_RS12725 PF04539 Sigma-70 region 3 N646_RS12725 PF04546 Sigma-70, non-essential region N646_RS12730 PF01807 CHC2 zinc finger N646_RS12730 PF08275 DNA primase catalytic core, N-terminal domain N646_RS12730 PF10410 DnaB-helicase binding domain of primase N646_RS12730 PF08278 DNA primase DnaG DnaB-binding N646_RS12735 PF09424 Yqey-like protein N646_RS12740 PF01165 Ribosomal protein S21 N646_RS12745 PF00814 Glycoprotease family N646_RS12750 PF00561 alpha/beta hydrolase fold N646_RS12755 PF02660 Glycerol-3-phosphate acyltransferase N646_RS12760 PF02152 Dihydroneopterin aldolase N646_RS12765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N646_RS12770 PF02673 Bacitracin resistance protein BacA N646_RS12775 PF12627 Probable RNA and SrmB- binding site of polymerase A N646_RS12775 PF01743 Poly A polymerase head domain N646_RS12775 PF01966 HD domain N646_RS12780 PF01471 Putative peptidoglycan binding domain N646_RS12780 PF13401 AAA domain N646_RS12795 PF08239 Bacterial SH3 domain N646_RS12800 PF01384 Phosphate transporter family N646_RS12805 PF01865 Protein of unknown function DUF47 N646_RS12810 PF01928 CYTH domain N646_RS12820 PF02743 Cache domain N646_RS12820 PF00672 HAMP domain N646_RS12820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS12825 PF08335 GlnD PII-uridylyltransferase N646_RS12825 PF03710 Glutamate-ammonia ligase adenylyltransferase N646_RS12830 PF01467 Cytidylyltransferase-like N646_RS12830 PF00294 pfkB family carbohydrate kinase N646_RS12835 PF02321 Outer membrane efflux protein N646_RS12840 PF00293 NUDIX domain N646_RS12845 PF06853 Protein of unknown function (DUF1249) N646_RS12850 PF00149 Calcineurin-like phosphoesterase N646_RS12855 PF05728 Uncharacterised protein family (UPF0227) N646_RS12860 PF01751 Toprim domain N646_RS12860 PF00204 DNA gyrase B N646_RS12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS12860 PF00986 DNA gyrase B subunit, carboxyl terminus N646_RS12865 PF03989 DNA gyrase C-terminal domain, beta-propeller N646_RS12865 PF00521 DNA gyrase/topoisomerase IV, subunit A N646_RS12870 PF13180 PDZ domain N646_RS12875 PF00595 PDZ domain N646_RS12880 PF06295 Protein of unknown function (DUF1043) N646_RS12885 PF03969 AFG1-like ATPase N646_RS12890 PF00572 Ribosomal protein L13 N646_RS12895 PF00380 Ribosomal protein S9/S16 N646_RS12900 PF00355 Rieske [2Fe-2S] domain N646_RS12900 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal N646_RS12905 PF00033 Cytochrome b/b6/petB N646_RS12905 PF00032 Cytochrome b(C-terminal)/b6/petD N646_RS12910 PF02167 Cytochrome C1 family N646_RS12915 PF02798 Glutathione S-transferase, N-terminal domain N646_RS12915 PF00043 Glutathione S-transferase, C-terminal domain N646_RS12920 PF04386 Stringent starvation protein B N646_RS12925 PF04972 BON domain N646_RS12930 PF13580 SIS domain N646_RS12935 PF02021 Uncharacterised protein family UPF0102 N646_RS12940 PF04348 LppC putative lipoprotein N646_RS12945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N646_RS12950 PF01795 MraW methylase family N646_RS12955 PF04999 Cell division protein FtsL N646_RS12960 PF00905 Penicillin binding protein transpeptidase domain N646_RS12960 PF03717 Penicillin-binding Protein dimerisation domain N646_RS12965 PF01225 Mur ligase family, catalytic domain N646_RS12965 PF02875 Mur ligase family, glutamate ligase domain N646_RS12965 PF08245 Mur ligase middle domain N646_RS12970 PF08245 Mur ligase middle domain N646_RS12970 PF02875 Mur ligase family, glutamate ligase domain N646_RS12970 PF01225 Mur ligase family, catalytic domain N646_RS12975 PF00953 Glycosyl transferase family 4 N646_RS12975 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N646_RS12980 PF02875 Mur ligase family, glutamate ligase domain N646_RS12980 PF08245 Mur ligase middle domain N646_RS12985 PF01098 Cell cycle protein N646_RS12990 PF04101 Glycosyltransferase family 28 C-terminal domain N646_RS12990 PF03033 Glycosyltransferase family 28 N-terminal domain N646_RS12995 PF01225 Mur ligase family, catalytic domain N646_RS12995 PF02875 Mur ligase family, glutamate ligase domain N646_RS12995 PF08245 Mur ligase middle domain N646_RS13000 PF03799 Cell division protein FtsQ N646_RS13000 PF08478 POTRA domain, FtsQ-type N646_RS13005 PF02491 SHS2 domain inserted in FTSA N646_RS13010 PF00091 Tubulin/FtsZ family, GTPase domain N646_RS13010 PF12327 FtsZ family, C-terminal domain N646_RS13015 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N646_RS13025 PF01043 SecA preprotein cross-linking domain N646_RS13025 PF07517 SecA DEAD-like domain N646_RS13025 PF02810 SEC-C motif N646_RS13025 PF07516 SecA Wing and Scaffold domain N646_RS13030 PF00293 NUDIX domain N646_RS13035 PF05173 Dihydrodipicolinate reductase, C-terminus N646_RS13035 PF01113 Dihydrodipicolinate reductase, N-terminus N646_RS13040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N646_RS13040 PF00117 Glutamine amidotransferase class-I N646_RS13045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N646_RS13045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N646_RS13045 PF02142 MGS-like domain N646_RS13060 PF01925 Sulfite exporter TauE/SafE N646_RS13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS13065 PF03466 LysR substrate binding domain N646_RS13070 PF03458 UPF0126 domain N646_RS13075 PF01497 Periplasmic binding protein N646_RS13080 PF03186 CobD/Cbib protein N646_RS13080 PF17113 Regulatory signalling modulator protein AmpE N646_RS13085 PF01048 Phosphorylase superfamily N646_RS13095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N646_RS13095 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS13100 PF01493 GXGXG motif N646_RS13100 PF01645 Conserved region in glutamate synthase N646_RS13100 PF04898 Glutamate synthase central domain N646_RS13100 PF00310 Glutamine amidotransferases class-II N646_RS13105 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N646_RS13105 PF07992 Pyridine nucleotide-disulphide oxidoreductase N646_RS13110 PF01645 Conserved region in glutamate synthase N646_RS13110 PF00310 Glutamine amidotransferases class-II N646_RS13110 PF04898 Glutamate synthase central domain N646_RS13110 PF01493 GXGXG motif N646_RS13115 PF16199 Radical_SAM C-terminal domain N646_RS13115 PF04055 Radical SAM superfamily N646_RS13120 PF01590 GAF domain N646_RS13120 PF00563 EAL domain N646_RS13120 PF00990 Diguanylate cyclase, GGDEF domain N646_RS13120 PF00360 Phytochrome region N646_RS13125 PF00072 Response regulator receiver domain N646_RS13125 PF00989 PAS fold N646_RS13125 PF01627 Hpt domain N646_RS13125 PF18415 Histidine kinase receptor ArcB trans-membrane domain N646_RS13125 PF00512 His Kinase A (phospho-acceptor) domain N646_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS13135 PF00486 Transcriptional regulatory protein, C terminal N646_RS13135 PF00072 Response regulator receiver domain N646_RS13145 PF03737 Aldolase/RraA N646_RS13155 PF03447 Homoserine dehydrogenase, NAD binding domain N646_RS13155 PF00696 Amino acid kinase family N646_RS13155 PF01842 ACT domain N646_RS13155 PF00742 Homoserine dehydrogenase N646_RS13155 PF13840 ACT domain N646_RS13160 PF00288 GHMP kinases N terminal domain N646_RS13160 PF08544 GHMP kinases C terminal N646_RS13165 PF00291 Pyridoxal-phosphate dependent enzyme N646_RS13165 PF14821 Threonine synthase N terminus N646_RS13175 PF01228 Glycine radical N646_RS13180 PF01261 Xylose isomerase-like TIM barrel N646_RS13185 PF03167 Uracil DNA glycosylase superfamily N646_RS13200 PF01235 Sodium:alanine symporter family N646_RS13205 PF03883 Peroxide stress protein YaaA N646_RS13210 PF00270 DEAD/DEAH box helicase N646_RS13210 PF00271 Helicase conserved C-terminal domain N646_RS13215 PF05175 Methyltransferase small domain N646_RS13220 PF05525 Branched-chain amino acid transport protein N646_RS13225 PF00258 Flavodoxin N646_RS13230 PF00589 Phage integrase family N646_RS13230 PF02899 Phage integrase, N-terminal SAM-like domain N646_RS13235 PF10411 Disulfide bond isomerase protein N-terminus N646_RS13235 PF13098 Thioredoxin-like domain N646_RS13240 PF02272 DHHA1 domain N646_RS13240 PF17768 RecJ OB domain N646_RS13240 PF01368 DHH family N646_RS13245 PF03462 PCRF domain N646_RS13245 PF00472 RF-1 domain N646_RS13250 PF01336 OB-fold nucleic acid binding domain N646_RS13250 PF00152 tRNA synthetases class II (D, K and N) N646_RS13255 PF00072 Response regulator receiver domain N646_RS13255 PF00158 Sigma-54 interaction domain N646_RS13255 PF02954 Bacterial regulatory protein, Fis family N646_RS13265 PF00248 Aldo/keto reductase family N646_RS13275 PF02976 DNA mismatch repair enzyme MutH N646_RS13280 PF00293 NUDIX domain N646_RS13285 PF02896 PEP-utilising enzyme, TIM barrel domain N646_RS13285 PF00391 PEP-utilising enzyme, mobile domain N646_RS13285 PF05524 PEP-utilising enzyme, N-terminal N646_RS13285 PF01590 GAF domain N646_RS13290 PF01925 Sulfite exporter TauE/SafE N646_RS13295 PF01790 Prolipoprotein diacylglyceryl transferase N646_RS13300 PF00303 Thymidylate synthase N646_RS13310 PF02690 Na+/Pi-cotransporter N646_RS13315 PF03466 LysR substrate binding domain N646_RS13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS13320 PF01022 Bacterial regulatory protein, arsR family N646_RS13325 PF01649 Ribosomal protein S20 N646_RS13330 PF03023 Lipid II flippase MurJ N646_RS13335 PF06574 FAD synthetase N646_RS13335 PF01687 Riboflavin kinase N646_RS13340 PF00133 tRNA synthetases class I (I, L, M and V) N646_RS13340 PF06827 Zinc finger found in FPG and IleRS N646_RS13340 PF08264 Anticodon-binding domain of tRNA N646_RS13345 PF01252 Signal peptidase (SPase) II N646_RS13350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N646_RS13355 PF02401 LytB protein N646_RS13365 PF04397 LytTr DNA-binding domain N646_RS13365 PF00072 Response regulator receiver domain N646_RS13370 PF06580 Histidine kinase N646_RS13370 PF07694 5TMR of 5TMR-LYT N646_RS13375 PF02554 Carbon starvation protein CstA N646_RS13390 PF01380 SIS domain N646_RS13395 PF03702 Anhydro-N-acetylmuramic acid kinase N646_RS13400 PF00933 Glycosyl hydrolase family 3 N terminal domain N646_RS13405 PF00793 DAHP synthetase I family N646_RS13410 PF01817 Chorismate mutase type II N646_RS13410 PF02153 Prephenate dehydrogenase N646_RS13415 PF04225 Opacity-associated protein A LysM-like domain N646_RS13415 PF01551 Peptidase family M23 N646_RS13420 PF07238 PilZ domain N646_RS13425 PF12848 ABC transporter N646_RS13425 PF00005 ABC transporter N646_RS13430 PF14718 Soluble lytic murein transglycosylase L domain N646_RS13430 PF01464 Transglycosylase SLT domain N646_RS13435 PF01371 Trp repressor protein N646_RS13440 PF01931 Protein of unknown function DUF84 N646_RS13445 PF00800 Prephenate dehydratase N646_RS13445 PF01817 Chorismate mutase type II N646_RS13455 PF13333 Integrase core domain N646_RS13455 PF13276 HTH-like domain N646_RS13455 PF00665 Integrase core domain N646_RS13460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N646_RS13465 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS13465 PF01464 Transglycosylase SLT domain N646_RS13470 PF13525 Outer membrane lipoprotein N646_RS13475 PF00849 RNA pseudouridylate synthase N646_RS13475 PF01479 S4 domain N646_RS13480 PF02578 Multi-copper polyphenol oxidoreductase laccase N646_RS13485 PF00004 ATPase family associated with various cellular activities (AAA) N646_RS13485 PF17871 AAA lid domain N646_RS13485 PF02861 Clp amino terminal domain, pathogenicity island component N646_RS13485 PF10431 C-terminal, D2-small domain, of ClpB protein N646_RS13485 PF07724 AAA domain (Cdc48 subfamily) N646_RS13530 PF03411 Penicillin-insensitive murein endopeptidase N646_RS13540 PF00037 4Fe-4S binding domain N646_RS13545 PF01136 Peptidase family U32 N646_RS13545 PF16325 Peptidase family U32 C-terminal domain N646_RS13550 PF04381 Putative exonuclease, RdgC N646_RS13555 PF00072 Response regulator receiver domain N646_RS13555 PF00486 Transcriptional regulatory protein, C terminal N646_RS13560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS13560 PF11808 Phosphate regulon sensor protein PhoR N646_RS13560 PF00989 PAS fold N646_RS13560 PF00512 His Kinase A (phospho-acceptor) domain N646_RS13565 PF12849 PBP superfamily domain N646_RS13570 PF01797 Transposase IS200 like N646_RS13575 PF02541 Ppx/GppA phosphatase family N646_RS13580 PF13089 Polyphosphate kinase N-terminal domain N646_RS13580 PF02503 Polyphosphate kinase middle domain N646_RS13580 PF13090 Polyphosphate kinase C-terminal domain 2 N646_RS13580 PF17941 Polyphosphate kinase C-terminal domain 1 N646_RS13585 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS13590 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS13595 PF00005 ABC transporter N646_RS13600 PF01895 PhoU domain N646_RS13605 PF03976 Polyphosphate kinase 2 (PPK2) N646_RS13610 PF03932 CutC family N646_RS13615 PF00578 AhpC/TSA family N646_RS13615 PF10417 C-terminal domain of 1-Cys peroxiredoxin N646_RS13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS13620 PF03466 LysR substrate binding domain N646_RS13625 PF01274 Malate synthase N646_RS13630 PF00463 Isocitrate lyase family N646_RS13635 PF00571 CBS domain N646_RS13645 PF02547 Queuosine biosynthesis protein N646_RS13650 PF01702 Queuine tRNA-ribosyltransferase N646_RS13655 PF02699 Preprotein translocase subunit N646_RS13660 PF13721 SecD export protein N-terminal TM region N646_RS13660 PF07549 SecD/SecF GG Motif N646_RS13660 PF02355 Protein export membrane protein N646_RS13665 PF07549 SecD/SecF GG Motif N646_RS13665 PF02355 Protein export membrane protein N646_RS13680 PF00459 Inositol monophosphatase family N646_RS13685 PF00588 SpoU rRNA Methylase family N646_RS13690 PF02082 Transcriptional regulator N646_RS13695 PF00266 Aminotransferase class-V N646_RS13700 PF01592 NifU-like N terminal domain N646_RS13705 PF01521 Iron-sulphur cluster biosynthesis N646_RS13710 PF07743 HSCB C-terminal oligomerisation domain N646_RS13710 PF00226 DnaJ domain N646_RS13715 PF00012 Hsp70 protein N646_RS13720 PF00111 2Fe-2S iron-sulfur cluster binding domain N646_RS13725 PF04384 Iron-sulphur cluster assembly N646_RS13730 PF00883 Cytosol aminopeptidase family, catalytic domain N646_RS13730 PF12404 Peptidase N646_RS13735 PF00334 Nucleoside diphosphate kinase N646_RS13740 PF04055 Radical SAM superfamily N646_RS13745 PF13464 Domain of unknown function (DUF4115) N646_RS13750 PF04551 GcpE protein N646_RS13755 PF13393 Histidyl-tRNA synthetase N646_RS13755 PF03129 Anticodon binding domain N646_RS13760 PF09976 Tetratricopeptide repeat-like domain N646_RS13765 PF13360 PQQ-like domain N646_RS13770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N646_RS13770 PF01926 50S ribosome-binding GTPase N646_RS13785 PF02601 Exonuclease VII, large subunit N646_RS13785 PF13742 OB-fold nucleic acid binding domain N646_RS13790 PF00571 CBS domain N646_RS13790 PF00478 IMP dehydrogenase / GMP reductase domain N646_RS13795 PF00117 Glutamine amidotransferase class-I N646_RS13795 PF00958 GMP synthase C terminal domain N646_RS13795 PF02540 NAD synthase N646_RS13800 PF03553 Na+/H+ antiporter family N646_RS13805 PF06483 Chitinase C N646_RS13805 PF00704 Glycosyl hydrolases family 18 N646_RS13810 PF01184 GPR1/FUN34/yaaH family N646_RS13815 PF01235 Sodium:alanine symporter family N646_RS13820 PF01266 FAD dependent oxidoreductase N646_RS13830 PF01053 Cys/Met metabolism PLP-dependent enzyme N646_RS13835 PF00202 Aminotransferase class-III N646_RS13855 PF00795 Carbon-nitrogen hydrolase N646_RS13855 PF00583 Acetyltransferase (GNAT) family N646_RS13860 PF03466 LysR substrate binding domain N646_RS13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS13885 PF00239 Resolvase, N terminal domain N646_RS13885 PF02796 Helix-turn-helix domain of resolvase N646_RS13900 PF00075 RNase H N646_RS13910 PF01668 SmpB protein N646_RS13915 PF03364 Polyketide cyclase / dehydrase and lipid transport N646_RS13920 PF03658 RnfH family Ubiquitin N646_RS13925 PF04355 SmpA / OmlA family N646_RS13935 PF02463 RecF/RecN/SMC N terminal domain N646_RS13945 PF01513 ATP-NAD kinase N646_RS13950 PF01025 GrpE N646_RS13955 PF00375 Sodium:dicarboxylate symporter family N646_RS13960 PF00012 Hsp70 protein N646_RS13965 PF00226 DnaJ domain N646_RS13965 PF01556 DnaJ C terminal domain N646_RS13965 PF00684 DnaJ central domain N646_RS13995 PF03806 AbgT putative transporter family N646_RS14000 PF14437 MafB19-like deaminase N646_RS14005 PF01464 Transglycosylase SLT domain N646_RS14005 PF00497 Bacterial extracellular solute-binding proteins, family 3 N646_RS14010 PF02769 AIR synthase related protein, C-terminal domain N646_RS14010 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N646_RS14010 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N646_RS14025 PF07715 TonB-dependent Receptor Plug Domain N646_RS14025 PF00593 TonB dependent receptor N646_RS14040 PF01546 Peptidase family M20/M25/M40 N646_RS14040 PF07687 Peptidase dimerisation domain N646_RS14045 PF00860 Permease family N646_RS14050 PF00156 Phosphoribosyl transferase domain N646_RS14055 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) N646_RS14060 PF07417 Sigma factor-binding transcriptional regulator Crl N646_RS14065 PF00696 Amino acid kinase family N646_RS14065 PF01472 PUA domain N646_RS14070 PF00171 Aldehyde dehydrogenase family N646_RS14075 PF03477 ATP cone domain N646_RS14080 PF01872 RibD C-terminal domain N646_RS14080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N646_RS14085 PF00677 Lumazine binding domain N646_RS14090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N646_RS14090 PF00925 GTP cyclohydrolase II N646_RS14095 PF00885 6,7-dimethyl-8-ribityllumazine synthase N646_RS14100 PF01029 NusB family N646_RS14105 PF02769 AIR synthase related protein, C-terminal domain N646_RS14105 PF00586 AIR synthase related protein, N-terminal domain N646_RS14110 PF04608 Phosphatidylglycerophosphatase A N646_RS14115 PF02779 Transketolase, pyrimidine binding domain N646_RS14115 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N646_RS14115 PF02780 Transketolase, C-terminal domain N646_RS14120 PF00348 Polyprenyl synthetase N646_RS14125 PF02609 Exonuclease VII small subunit N646_RS14130 PF01618 MotA/TolQ/ExbB proton channel family N646_RS14135 PF00691 OmpA family N646_RS14135 PF13677 Membrane MotB of proton-channel complex MotA/MotB N646_RS14140 PF02926 THUMP domain N646_RS14140 PF02568 Thiamine biosynthesis protein (ThiI) N646_RS14145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS14145 PF03466 LysR substrate binding domain N646_RS14155 PF04241 Protein of unknown function (DUF423) N646_RS14160 PF18125 RlmM ferredoxin-like domain N646_RS14160 PF01728 FtsJ-like methyltransferase N646_RS14165 PF13276 HTH-like domain N646_RS14165 PF00665 Integrase core domain N646_RS14165 PF13333 Integrase core domain N646_RS14175 PF01367 5'-3' exonuclease, C-terminal SAM fold N646_RS14175 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N646_RS14180 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases N646_RS14180 PF03641 Possible lysine decarboxylase N646_RS14180 PF11892 Domain of unknown function (DUF3412) N646_RS14185 PF00990 Diguanylate cyclase, GGDEF domain N646_RS14195 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N646_RS14195 PF14489 QueF-like protein N646_RS14200 PF07348 Syd protein (SUKH-2) N646_RS14205 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) N646_RS14210 PF03180 NLPA lipoprotein N646_RS14215 PF00528 Binding-protein-dependent transport system inner membrane component N646_RS14220 PF00005 ABC transporter N646_RS14220 PF09383 NIL domain N646_RS14230 PF00356 Bacterial regulatory proteins, lacI family N646_RS14235 PF02378 Phosphotransferase system, EIIC N646_RS14235 PF00367 phosphotransferase system, EIIB N646_RS14240 PF16657 Maltogenic Amylase, C-terminal domain N646_RS14240 PF00128 Alpha amylase, catalytic domain N646_RS14255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N646_RS14255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N646_RS14260 PF00464 Serine hydroxymethyltransferase N646_RS14265 PF04055 Radical SAM superfamily N646_RS14265 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family N646_RS14270 PF03099 Biotin/lipoate A/B protein ligase family N646_RS14275 PF04359 Protein of unknown function (DUF493) N646_RS14280 PF00768 D-alanyl-D-alanine carboxypeptidase N646_RS14280 PF07943 Penicillin-binding protein 5, C-terminal domain N646_RS14285 PF05036 Sporulation related domain N646_RS14285 PF03330 Lytic transglycolase N646_RS14290 PF01098 Cell cycle protein N646_RS14295 PF00905 Penicillin binding protein transpeptidase domain N646_RS14295 PF03717 Penicillin-binding Protein dimerisation domain N646_RS14300 PF02590 Predicted SPOUT methyltransferase N646_RS14310 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N646_RS14310 PF06144 DNA polymerase III, delta subunit N646_RS14315 PF04390 Lipopolysaccharide-assembly N646_RS14320 PF13603 Leucyl-tRNA synthetase, Domain 2 N646_RS14320 PF00133 tRNA synthetases class I (I, L, M and V) N646_RS14320 PF08264 Anticodon-binding domain of tRNA N646_RS14325 PF07295 Zinc-ribbon containing domain N646_RS14330 PF00795 Carbon-nitrogen hydrolase N646_RS14335 PF00571 CBS domain N646_RS14335 PF03471 Transporter associated domain N646_RS14340 PF02130 Uncharacterized protein family UPF0054 N646_RS14345 PF02562 PhoH-like protein N646_RS14350 PF00919 Uncharacterized protein family UPF0004 N646_RS14350 PF01938 TRAM domain N646_RS14350 PF04055 Radical SAM superfamily N646_RS14355 PF01494 FAD binding domain N646_RS14385 PF06071 Protein of unknown function (DUF933) N646_RS14385 PF01926 50S ribosome-binding GTPase N646_RS14390 PF01195 Peptidyl-tRNA hydrolase N646_RS14395 PF14572 Phosphoribosyl synthetase-associated domain N646_RS14395 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N646_RS14400 PF00288 GHMP kinases N terminal domain N646_RS14400 PF08544 GHMP kinases C terminal N646_RS14405 PF03550 Outer membrane lipoprotein LolB N646_RS14410 PF01488 Shikimate / quinate 5-dehydrogenase N646_RS14410 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N646_RS14410 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N646_RS14415 PF00472 RF-1 domain N646_RS14415 PF03462 PCRF domain N646_RS14420 PF13847 Methyltransferase domain N646_RS14420 PF17827 PrmC N-terminal domain N646_RS14425 PF04247 Invasion gene expression up-regulator, SirB N646_RS14430 PF13369 Transglutaminase-like superfamily N646_RS14435 PF00793 DAHP synthetase I family N646_RS14440 PF00149 Calcineurin-like phosphoesterase N646_RS14440 PF02872 5'-nucleotidase, C-terminal domain N646_RS14445 PF04073 Aminoacyl-tRNA editing domain N646_RS14450 PF01479 S4 domain N646_RS14450 PF00849 RNA pseudouridylate synthase N646_RS14455 PF01713 Smr domain N646_RS14480 PF02838 Glycosyl hydrolase family 20, domain 2 N646_RS14480 PF03173 Putative carbohydrate binding domain N646_RS14480 PF00728 Glycosyl hydrolase family 20, catalytic domain N646_RS14480 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain N646_RS14495 PF00403 Heavy-metal-associated domain N646_RS14500 PF13609 Gram-negative porin N646_RS14505 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N646_RS14510 PF00749 tRNA synthetases class I (E and Q), catalytic domain N646_RS14515 PF01389 OmpA-like transmembrane domain N646_RS14515 PF00691 OmpA family N646_RS14560 PF01584 CheW-like domain N646_RS14560 PF00072 Response regulator receiver domain N646_RS14565 PF01739 CheR methyltransferase, SAM binding domain N646_RS14565 PF03705 CheR methyltransferase, all-alpha domain N646_RS14570 PF00460 Flagella basal body rod protein N646_RS14575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N646_RS14575 PF00460 Flagella basal body rod protein N646_RS14580 PF03963 Flagellar hook capping protein - N-terminal region N646_RS14580 PF13860 FlgD Ig-like domain N646_RS14580 PF13861 FlgD Tudor-like domain N646_RS14585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N646_RS14585 PF07559 Flagellar basal body protein FlaE N646_RS14585 PF00460 Flagella basal body rod protein N646_RS14590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N646_RS14590 PF00460 Flagella basal body rod protein N646_RS14595 PF00460 Flagella basal body rod protein N646_RS14595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N646_RS14600 PF02107 Flagellar L-ring protein N646_RS14605 PF02119 Flagellar P-ring protein N646_RS14610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N646_RS14610 PF10135 Rod binding protein N646_RS14615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N646_RS14615 PF07196 Flagellin hook IN motif N646_RS14620 PF00669 Bacterial flagellin N-terminal helical region N646_RS14625 PF00700 Bacterial flagellin C-terminal helical region N646_RS14625 PF00669 Bacterial flagellin N-terminal helical region N646_RS14625 PF07196 Flagellin hook IN motif N646_RS14635 PF07196 Flagellin hook IN motif N646_RS14635 PF00669 Bacterial flagellin N-terminal helical region N646_RS14635 PF00700 Bacterial flagellin C-terminal helical region N646_RS14640 PF00700 Bacterial flagellin C-terminal helical region N646_RS14640 PF07196 Flagellin hook IN motif N646_RS14640 PF00669 Bacterial flagellin N-terminal helical region N646_RS14645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N646_RS14650 PF02896 PEP-utilising enzyme, TIM barrel domain N646_RS14650 PF05524 PEP-utilising enzyme, N-terminal N646_RS14650 PF00391 PEP-utilising enzyme, mobile domain N646_RS14655 PF00381 PTS HPr component phosphorylation site N646_RS14660 PF00291 Pyridoxal-phosphate dependent enzyme N646_RS14670 PF04354 ZipA, C-terminal FtsZ-binding domain N646_RS14675 PF01653 NAD-dependent DNA ligase adenylation domain N646_RS14675 PF00533 BRCA1 C Terminus (BRCT) domain N646_RS14675 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N646_RS14675 PF12826 Helix-hairpin-helix motif N646_RS14675 PF03120 NAD-dependent DNA ligase OB-fold domain N646_RS14680 PF03573 outer membrane porin, OprD family N646_RS14690 PF16200 C-terminal region of band_7 N646_RS14690 PF01145 SPFH domain / Band 7 family N646_RS14695 PF11658 Cellulose biosynthesis protein BcsG N646_RS14710 PF06564 Cellulose biosynthesis protein BcsQ N646_RS14715 PF03552 Cellulose synthase N646_RS14715 PF07238 PilZ domain N646_RS14715 PF00535 Glycosyl transferase family 2 N646_RS14720 PF03170 Bacterial cellulose synthase subunit N646_RS14725 PF01270 Glycosyl hydrolases family 8 N646_RS14730 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) N646_RS14730 PF13176 Tetratricopeptide repeat N646_RS14735 PF00085 Thioredoxin N646_RS14740 PF00106 short chain dehydrogenase N646_RS14745 PF08338 Domain of unknown function (DUF1731) N646_RS14745 PF01370 NAD dependent epimerase/dehydratase family N646_RS14750 PF07556 Protein of unknown function (DUF1538) N646_RS14755 PF07556 Protein of unknown function (DUF1538) N646_RS14770 PF12850 Calcineurin-like phosphoesterase superfamily domain N646_RS14785 PF17323 Trans-membrane regulatory protein ToxS N646_RS14790 PF00486 Transcriptional regulatory protein, C terminal N646_RS14795 PF00183 Hsp90 protein N646_RS14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS14800 PF05191 Adenylate kinase, active site lid N646_RS14805 PF00762 Ferrochelatase N646_RS14810 PF00854 POT family N646_RS14815 PF02357 Transcription termination factor nusG N646_RS14820 PF00733 Asparagine synthase N646_RS14820 PF13537 Glutamine amidotransferase domain N646_RS14825 PF00999 Sodium/hydrogen exchanger family N646_RS14825 PF02254 TrkA-N domain N646_RS14830 PF00480 ROK family N646_RS14830 PF01047 MarR family N646_RS14835 PF01979 Amidohydrolase family N646_RS14840 PF00367 phosphotransferase system, EIIB N646_RS14840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N646_RS14840 PF02378 Phosphotransferase system, EIIC N646_RS14845 PF00749 tRNA synthetases class I (E and Q), catalytic domain N646_RS14845 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N646_RS14850 PF01475 Ferric uptake regulator family N646_RS14860 PF00258 Flavodoxin N646_RS14870 PF12697 Alpha/beta hydrolase family N646_RS14875 PF17206 SeqA protein N-terminal domain N646_RS14875 PF03925 SeqA protein C-terminal domain N646_RS14880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N646_RS14880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N646_RS14880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N646_RS14880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N646_RS14890 PF01784 NIF3 (NGG1p interacting factor 3) N646_RS14895 PF00285 Citrate synthase, C-terminal domain N646_RS14900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N646_RS14905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N646_RS14910 PF00890 FAD binding domain N646_RS14910 PF02910 Fumarate reductase flavoprotein C-term N646_RS14915 PF13085 2Fe-2S iron-sulfur cluster binding domain N646_RS14920 PF16078 2-oxoglutarate dehydrogenase N-terminus N646_RS14920 PF16870 2-oxoglutarate dehydrogenase C-terminal N646_RS14920 PF02779 Transketolase, pyrimidine binding domain N646_RS14920 PF00676 Dehydrogenase E1 component N646_RS14925 PF02817 e3 binding domain N646_RS14925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N646_RS14925 PF00364 Biotin-requiring enzyme N646_RS14930 PF08442 ATP-grasp domain N646_RS14930 PF00549 CoA-ligase N646_RS14935 PF02629 CoA binding domain N646_RS14935 PF00549 CoA-ligase N646_RS14940 PF00950 ABC 3 transport family N646_RS14945 PF00005 ABC transporter N646_RS14950 PF01297 Zinc-uptake complex component A periplasmic N646_RS14955 PF12833 Helix-turn-helix domain N646_RS14955 PF02311 AraC-like ligand binding domain N646_RS14960 PF04023 FeoA domain N646_RS14965 PF02421 Ferrous iron transport protein B N646_RS14965 PF07664 Ferrous iron transport protein B C terminus N646_RS14965 PF17910 FeoB cytosolic helical domain N646_RS14965 PF07670 Nucleoside recognition N646_RS14985 PF03485 Arginyl tRNA synthetase N terminal domain N646_RS14985 PF05746 DALR anticodon binding domain N646_RS14985 PF00750 tRNA synthetases class I (R) N646_RS14990 PF06185 YecM protein N646_RS15000 PF00089 Trypsin N646_RS15005 PF01842 ACT domain N646_RS15005 PF00551 Formyl transferase N646_RS15010 PF04851 Type III restriction enzyme, res subunit N646_RS15010 PF13307 Helicase C-terminal domain N646_RS15015 PF00814 Glycoprotease family N646_RS15025 PF03843 Outer membrane lipoprotein Slp family N646_RS15030 PF00561 alpha/beta hydrolase fold N646_RS15035 PF00501 AMP-binding enzyme N646_RS15035 PF13193 AMP-binding enzyme C-terminal domain N646_RS15040 PF00570 HRDC domain N646_RS15040 PF01612 3'-5' exonuclease N646_RS15045 PF03776 Septum formation topological specificity factor MinE N646_RS15050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N646_RS15055 PF03775 Septum formation inhibitor MinC, C-terminal domain N646_RS15055 PF05209 Septum formation inhibitor MinC, N-terminal domain N646_RS15060 PF05166 YcgL domain N646_RS15065 PF13406 Transglycosylase SLT domain N646_RS15070 PF03466 LysR substrate binding domain N646_RS15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N646_RS15075 PF01773 Na+ dependent nucleoside transporter N-terminus N646_RS15075 PF07662 Na+ dependent nucleoside transporter C-terminus N646_RS15075 PF07670 Nucleoside recognition N646_RS15080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N646_RS15080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N646_RS15090 PF02801 Beta-ketoacyl synthase, C-terminal domain N646_RS15090 PF00109 Beta-ketoacyl synthase, N-terminal domain N646_RS15100 PF07977 FabA-like domain N646_RS15105 PF00109 Beta-ketoacyl synthase, N-terminal domain N646_RS15105 PF02801 Beta-ketoacyl synthase, C-terminal domain N646_RS15130 PF00221 Aromatic amino acid lyase N646_RS15135 PF00535 Glycosyl transferase family 2 N646_RS15140 PF07977 FabA-like domain N646_RS15155 PF00550 Phosphopantetheine attachment site N646_RS15160 PF00550 Phosphopantetheine attachment site N646_RS15185 PF04820 Tryptophan halogenase N646_RS15195 PF00270 DEAD/DEAH box helicase N646_RS15195 PF00271 Helicase conserved C-terminal domain N646_RS15200 PF02080 TrkA-C domain N646_RS15200 PF02254 TrkA-N domain N646_RS15205 PF02386 Cation transport protein N646_RS15220 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N646_RS15225 PF03480 Bacterial extracellular solute-binding protein, family 7 N646_RS15230 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N646_RS15235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N646_RS15240 PF02954 Bacterial regulatory protein, Fis family N646_RS15240 PF00158 Sigma-54 interaction domain N646_RS15240 PF00072 Response regulator receiver domain N646_RS15245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS15245 PF00512 His Kinase A (phospho-acceptor) domain N646_RS15245 PF02743 Cache domain N646_RS15250 PF05697 Bacterial trigger factor protein (TF) N646_RS15250 PF05698 Bacterial trigger factor protein (TF) C-terminus N646_RS15250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N646_RS15255 PF00574 Clp protease N646_RS15260 PF07724 AAA domain (Cdc48 subfamily) N646_RS15260 PF10431 C-terminal, D2-small domain, of ClpB protein N646_RS15260 PF06689 ClpX C4-type zinc finger N646_RS15265 PF02190 ATP-dependent protease La (LON) substrate-binding domain N646_RS15265 PF05362 Lon protease (S16) C-terminal proteolytic domain N646_RS15265 PF00004 ATPase family associated with various cellular activities (AAA) N646_RS15270 PF00216 Bacterial DNA-binding protein N646_RS15275 PF13145 PPIC-type PPIASE domain N646_RS15295 PF13286 Phosphohydrolase-associated domain N646_RS15295 PF01966 HD domain N646_RS15305 PF00155 Aminotransferase class I and II N646_RS15495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N646_RS15495 PF00672 HAMP domain N646_RS15495 PF02743 Cache domain N646_RS15565 PF12704 MacB-like periplasmic core domain N646_RS15565 PF02687 FtsX-like permease family N646_RS15575 PF03772 Competence protein N646_RS15575 PF00753 Metallo-beta-lactamase superfamily N646_RS15575 PF13567 Domain of unknown function (DUF4131) N646_RS16085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N646_RS16085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N646_RS16100 PF09397 Ftsk gamma domain N646_RS16100 PF17854 FtsK alpha domain N646_RS16100 PF01580 FtsK/SpoIIIE family N646_RS16100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N646_RS16235 PF03553 Na+/H+ antiporter family N646_RS16390 PF16874 Glycosyl hydrolase family 36 C-terminal domain N646_RS16390 PF16875 Glycosyl hydrolase family 36 N-terminal domain N646_RS16525 PF00158 Sigma-54 interaction domain N646_RS16525 PF01590 GAF domain N646_RS16770 PF00271 Helicase conserved C-terminal domain N646_RS16770 PF04408 Helicase associated domain (HA2) N646_RS16770 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N646_RS16770 PF11898 Domain of unknown function (DUF3418) N646_RS16770 PF00270 DEAD/DEAH box helicase N646_RS16785 PF09423 PhoD-like phosphatase N646_RS16785 PF16655 PhoD-like phosphatase, N-terminal domain N646_RS17255 PF04371 Porphyromonas-type peptidyl-arginine deiminase N646_RS17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS17315 PF00072 Response regulator receiver domain N646_RS17315 PF09308 LuxQ, periplasmic N646_RS17315 PF00512 His Kinase A (phospho-acceptor) domain N646_RS17330 PF00563 EAL domain N646_RS17330 PF00990 Diguanylate cyclase, GGDEF domain N646_RS18120 PF03454 MoeA C-terminal region (domain IV) N646_RS18120 PF00994 Probable molybdopterin binding domain N646_RS18120 PF03453 MoeA N-terminal region (domain I and II) N646_RS18155 PF00989 PAS fold N646_RS18155 PF00512 His Kinase A (phospho-acceptor) domain N646_RS18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS18315 PF00403 Heavy-metal-associated domain N646_RS18320 PF00403 Heavy-metal-associated domain N646_RS18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N646_RS18370 PF00512 His Kinase A (phospho-acceptor) domain N646_RS18370 PF09308 LuxQ, periplasmic N646_RS18370 PF00072 Response regulator receiver domain N646_RS18485 PF05088 Bacterial NAD-glutamate dehydrogenase N646_RS18495 PF05088 Bacterial NAD-glutamate dehydrogenase N646_RS19290 PF00593 TonB dependent receptor N646_RS19290 PF07715 TonB-dependent Receptor Plug Domain N646_RS19405 PF00135 Carboxylesterase family N646_RS19925 PF00152 tRNA synthetases class II (D, K and N) N646_RS19925 PF01336 OB-fold nucleic acid binding domain N646_RS20140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N646_RS20200 PF00136 DNA polymerase family B N646_RS20200 PF03104 DNA polymerase family B, exonuclease domain N646_RS20470 PF02470 MlaD protein N646_RS20615 PF00367 phosphotransferase system, EIIB N646_RS20615 PF02378 Phosphotransferase system, EIIC N646_RS20695 PF12111 Polyribonucleotide phosphorylase C terminal N646_RS20695 PF10150 Ribonuclease E/G family N646_RS20695 PF00575 S1 RNA binding domain N646_RS20835 PF13409 Glutathione S-transferase, N-terminal domain N646_RS20930 PF03116 NQR2, RnfD, RnfE family N646_RS21275 PF01343 Peptidase family S49 N646_RS21470 PF01266 FAD dependent oxidoreductase N646_RS21470 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N646_RS21570 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N646_RS21670 PF00771 FHIPEP family N646_RS21725 PF08345 Flagellar M-ring protein C-terminal N646_RS21725 PF01514 Secretory protein of YscJ/FliF family N646_RS21760 PF02465 Flagellar hook-associated protein 2 N-terminus N646_RS21760 PF07195 Flagellar hook-associated protein 2 C-terminus N646_RS21760 PF07196 Flagellin hook IN motif N646_RS21940 PF01171 PP-loop family N646_RS21940 PF09179 TilS substrate binding domain N646_RS21940 PF11734 TilS substrate C-terminal domain N646_RS22290 PF17946 RecC C-terminal domain N646_RS22335 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle N646_RS22335 PF14602 Hexapeptide repeat of succinyl-transferase N646_RS22465 PF03764 Elongation factor G, domain IV N646_RS22465 PF03144 Elongation factor Tu domain 2 N646_RS22465 PF14492 Elongation Factor G, domain II N646_RS22465 PF00009 Elongation factor Tu GTP binding domain N646_RS22465 PF00679 Elongation factor G C-terminus N646_RS22615 PF00009 Elongation factor Tu GTP binding domain N646_RS22615 PF04760 Translation initiation factor IF-2, N-terminal region N646_RS22615 PF11987 Translation-initiation factor 2 N646_RS22615 PF08364 Bacterial translation initiation factor IF-2 associated region N646_RS22660 PF01728 FtsJ-like methyltransferase N646_RS22715 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain N646_RS22715 PF06165 Glycosyltransferase family 36 N646_RS22785 PF00330 Aconitase family (aconitate hydratase) N646_RS22785 PF11791 Aconitate B N-terminal domain N646_RS22785 PF06434 Aconitate hydratase 2 N-terminus N646_RS22820 PF00270 DEAD/DEAH box helicase N646_RS22820 PF11898 Domain of unknown function (DUF3418) N646_RS22820 PF00271 Helicase conserved C-terminal domain N646_RS22820 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N646_RS22820 PF04408 Helicase associated domain (HA2) N646_RS23030 PF00675 Insulinase (Peptidase family M16) N646_RS23030 PF05193 Peptidase M16 inactive domain N646_RS23195 PF02910 Fumarate reductase flavoprotein C-term N646_RS23195 PF00890 FAD binding domain N646_RS23215 PF01494 FAD binding domain