locus-tag class description VAA_RS00005 PF00175 Oxidoreductase NAD-binding domain VAA_RS00010 PF00970 Oxidoreductase FAD-binding domain VAA_RS00010 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA_RS00010 PF00175 Oxidoreductase NAD-binding domain VAA_RS00015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VAA_RS00025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAA_RS00025 PF07498 Rho termination factor, N-terminal domain VAA_RS00025 PF07497 Rho termination factor, RNA-binding domain VAA_RS00030 PF00085 Thioredoxin VAA_RS00035 PF00270 DEAD/DEAH box helicase VAA_RS00035 PF00271 Helicase conserved C-terminal domain VAA_RS00040 PF02541 Ppx/GppA phosphatase family VAA_RS00045 PF02592 Putative vitamin uptake transporter VAA_RS00050 PF00625 Guanylate kinase VAA_RS00055 PF01192 RNA polymerase Rpb6 VAA_RS00060 PF02824 TGS domain VAA_RS00060 PF04607 Region found in RelA / SpoT proteins VAA_RS00060 PF13291 ACT domain VAA_RS00065 PF00270 DEAD/DEAH box helicase VAA_RS00065 PF00271 Helicase conserved C-terminal domain VAA_RS00065 PF17191 RecG wedge domain VAA_RS00070 PF00860 Permease family VAA_RS00075 PF00672 HAMP domain VAA_RS00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS00075 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS00080 PF00486 Transcriptional regulatory protein, C terminal VAA_RS00080 PF00072 Response regulator receiver domain VAA_RS00085 PF06483 Chitinase C VAA_RS00085 PF00704 Glycosyl hydrolases family 18 VAA_RS00095 PF00881 Nitroreductase family VAA_RS00105 PF03466 LysR substrate binding domain VAA_RS00105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS00115 PF06942 GlpM protein VAA_RS00125 PF01272 Transcription elongation factor, GreA/GreB, C-term VAA_RS00125 PF03449 Transcription elongation factor, N-terminal VAA_RS00130 PF17674 HHH domain VAA_RS00130 PF00575 S1 RNA binding domain VAA_RS00130 PF09371 Tex-like protein N-terminal domain VAA_RS00130 PF16921 Tex protein YqgF-like domain VAA_RS00145 PF00156 Phosphoribosyl transferase domain VAA_RS00150 PF01106 NifU-like domain VAA_RS00150 PF01521 Iron-sulphur cluster biosynthesis VAA_RS00155 PF00293 NUDIX domain VAA_RS00160 PF00459 Inositol monophosphatase family VAA_RS00165 PF01203 Type II secretion system (T2SS), protein N VAA_RS00170 PF04612 Type II secretion system (T2SS), protein M VAA_RS00175 PF12693 GspL periplasmic domain VAA_RS00175 PF05134 Type II secretion system (T2SS), protein L VAA_RS00180 PF03934 Type II secretion system (T2SS), protein K VAA_RS00185 PF11612 Type II secretion system (T2SS), protein J VAA_RS00185 PF07963 Prokaryotic N-terminal methylation motif VAA_RS00190 PF02501 Type II secretion system (T2SS), protein I VAA_RS00190 PF07963 Prokaryotic N-terminal methylation motif VAA_RS00195 PF12019 Type II transport protein GspH VAA_RS00200 PF07963 Prokaryotic N-terminal methylation motif VAA_RS00200 PF08334 Type II secretion system (T2SS), protein G VAA_RS00205 PF00482 Type II secretion system (T2SS), protein F VAA_RS00210 PF00437 Type II/IV secretion system protein VAA_RS00215 PF00263 Bacterial type II and III secretion system protein VAA_RS00215 PF03958 Bacterial type II/III secretion system short domain VAA_RS00220 PF11356 Type II secretion system protein C VAA_RS00225 PF01479 S4 domain VAA_RS00230 PF01430 Hsp33 protein VAA_RS00235 PF01293 Phosphoenolpyruvate carboxykinase VAA_RS00245 PF00583 Acetyltransferase (GNAT) family VAA_RS00245 PF09500 Putative thioesterase (yiiD_Cterm) VAA_RS00250 PF02580 D-Tyr-tRNA(Tyr) deacylase VAA_RS00255 PF03631 Virulence factor BrkB VAA_RS00260 PF00009 Elongation factor Tu GTP binding domain VAA_RS00260 PF03144 Elongation factor Tu domain 2 VAA_RS00260 PF00679 Elongation factor G C-terminus VAA_RS00265 PF00120 Glutamine synthetase, catalytic domain VAA_RS00265 PF03951 Glutamine synthetase, beta-Grasp domain VAA_RS00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS00275 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS00275 PF00989 PAS fold VAA_RS00280 PF02954 Bacterial regulatory protein, Fis family VAA_RS00280 PF00072 Response regulator receiver domain VAA_RS00280 PF00158 Sigma-54 interaction domain VAA_RS00285 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS00285 PF03707 Bacterial signalling protein N terminal repeat VAA_RS00285 PF00563 EAL domain VAA_RS00285 PF13188 PAS domain VAA_RS00290 PF00962 Adenosine/AMP deaminase VAA_RS00330 PF01177 Asp/Glu/Hydantoin racemase VAA_RS00340 PF07715 TonB-dependent Receptor Plug Domain VAA_RS00340 PF00593 TonB dependent receptor VAA_RS00365 PF01381 Helix-turn-helix VAA_RS00375 PF07804 HipA-like C-terminal domain VAA_RS00375 PF13657 HipA N-terminal domain VAA_RS00415 PF00239 Resolvase, N terminal domain VAA_RS00415 PF02796 Helix-turn-helix domain of resolvase VAA_RS00440 PF05958 tRNA (Uracil-5-)-methyltransferase VAA_RS00450 PF02929 Beta galactosidase small chain VAA_RS00450 PF16353 Domain of unknown function(DUF4981) VAA_RS00450 PF00703 Glycosyl hydrolases family 2 VAA_RS00450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VAA_RS00450 PF02837 Glycosyl hydrolases family 2, sugar binding domain VAA_RS00455 PF07226 Protein of unknown function (DUF1422) VAA_RS00460 PF00440 Bacterial regulatory proteins, tetR family VAA_RS00470 PF01554 MatE VAA_RS00485 PF01553 Acyltransferase VAA_RS00490 PF01040 UbiA prenyltransferase family VAA_RS00495 PF04345 Chorismate lyase VAA_RS00500 PF03748 Flagellar basal body-associated protein FliL VAA_RS00505 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VAA_RS00505 PF01694 Rhomboid family VAA_RS00510 PF00581 Rhodanese-like domain VAA_RS00515 PF00140 Sigma-70 factor, region 1.2 VAA_RS00515 PF04542 Sigma-70 region 2 VAA_RS00515 PF04545 Sigma-70, region 4 VAA_RS00520 PF18075 FtsX extracellular domain VAA_RS00525 PF00005 ABC transporter VAA_RS00530 PF02881 SRP54-type protein, helical bundle domain VAA_RS00530 PF00448 SRP54-type protein, GTPase domain VAA_RS00545 PF01914 MarC family integral membrane protein VAA_RS00555 PF13737 Transposase DDE domain VAA_RS00580 PF13817 IS66 C-terminal element VAA_RS00580 PF03050 Transposase IS66 family VAA_RS00580 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS00580 PF13007 Transposase C of IS166 homeodomain VAA_RS00585 PF01914 MarC family integral membrane protein VAA_RS00610 PF00210 Ferritin-like domain VAA_RS00615 PF00563 EAL domain VAA_RS00615 PF08668 HDOD domain VAA_RS00620 PF01810 LysE type translocator VAA_RS00625 PF12146 Serine aminopeptidase, S33 VAA_RS00640 PF03942 DTW domain VAA_RS00645 PF13419 Haloacid dehalogenase-like hydrolase VAA_RS00650 PF02899 Phage integrase, N-terminal SAM-like domain VAA_RS00650 PF00589 Phage integrase family VAA_RS00660 PF01678 Diaminopimelate epimerase VAA_RS00665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VAA_RS00665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VAA_RS00670 PF01491 Frataxin-like domain VAA_RS00675 PF12633 Adenylate cyclase NT domain VAA_RS00675 PF01295 Adenylate cyclase, class-I VAA_RS00680 PF03900 Porphobilinogen deaminase, C-terminal domain VAA_RS00680 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VAA_RS00685 PF02602 Uroporphyrinogen-III synthase HemD VAA_RS00695 PF07219 HemY protein N-terminus VAA_RS00730 PF00132 Bacterial transferase hexapeptide (six repeats) VAA_RS00735 PF07369 Protein of unknown function (DUF1488) VAA_RS00740 PF01488 Shikimate / quinate 5-dehydrogenase VAA_RS00740 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VAA_RS00740 PF08501 Shikimate dehydrogenase substrate binding domain VAA_RS00745 PF01218 Coproporphyrinogen III oxidase VAA_RS00750 PF01300 Telomere recombination VAA_RS00755 PF00731 AIR carboxylase VAA_RS00760 PF02222 ATP-grasp domain VAA_RS00760 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VAA_RS00765 PF01396 Topoisomerase DNA binding C4 zinc finger VAA_RS00770 PF04361 Protein of unknown function (DUF494) VAA_RS00780 PF01476 LysM domain VAA_RS00785 PF01327 Polypeptide deformylase VAA_RS00790 PF02911 Formyl transferase, C-terminal domain VAA_RS00790 PF00551 Formyl transferase VAA_RS00795 PF01029 NusB family VAA_RS00795 PF01189 16S rRNA methyltransferase RsmB/F VAA_RS00800 PF02254 TrkA-N domain VAA_RS00800 PF02080 TrkA-C domain VAA_RS00805 PF02386 Cation transport protein VAA_RS00815 PF03006 Haemolysin-III related VAA_RS00820 PF06288 Protein of unknown function (DUF1040) VAA_RS00825 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VAA_RS00825 PF13746 4Fe-4S dicluster domain VAA_RS00825 PF12801 4Fe-4S binding domain VAA_RS00830 PF01636 Phosphotransferase enzyme family VAA_RS00835 PF01323 DSBA-like thioredoxin domain VAA_RS00845 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS00845 PF13817 IS66 C-terminal element VAA_RS00845 PF13007 Transposase C of IS166 homeodomain VAA_RS00845 PF03050 Transposase IS66 family VAA_RS00920 PF13335 Magnesium chelatase, subunit ChlI C-terminal VAA_RS00920 PF01078 Magnesium chelatase, subunit ChlI VAA_RS00925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA_RS00925 PF00205 Thiamine pyrophosphate enzyme, central domain VAA_RS00925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA_RS00935 PF01063 Amino-transferase class IV VAA_RS00940 PF00920 Dehydratase family VAA_RS00945 PF00585 C-terminal regulatory domain of Threonine dehydratase VAA_RS00945 PF00291 Pyridoxal-phosphate dependent enzyme VAA_RS00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS00955 PF03466 LysR substrate binding domain VAA_RS00965 PF01206 Sulfurtransferase TusA VAA_RS00980 PF02091 Glycyl-tRNA synthetase alpha subunit VAA_RS00985 PF02092 Glycyl-tRNA synthetase beta subunit VAA_RS00985 PF05746 DALR anticodon binding domain VAA_RS00990 PF00155 Aminotransferase class I and II VAA_RS00995 PF00011 Hsp20/alpha crystallin family VAA_RS01005 PF01751 Toprim domain VAA_RS01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS01005 PF00986 DNA gyrase B subunit, carboxyl terminus VAA_RS01005 PF00204 DNA gyrase B VAA_RS01005 PF18053 DNA gyrase B subunit insert domain VAA_RS01010 PF02463 RecF/RecN/SMC N terminal domain VAA_RS01015 PF02768 DNA polymerase III beta subunit, C-terminal domain VAA_RS01015 PF00712 DNA polymerase III beta subunit, N-terminal domain VAA_RS01015 PF02767 DNA polymerase III beta subunit, central domain VAA_RS01020 PF11638 DnaA N-terminal domain VAA_RS01020 PF00308 Bacterial dnaA protein VAA_RS01020 PF08299 Bacterial dnaA protein helix-turn-helix VAA_RS01025 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA_RS01035 PF00005 ABC transporter VAA_RS01040 PF00468 Ribosomal protein L34 VAA_RS01045 PF00825 Ribonuclease P VAA_RS01050 PF02096 60Kd inner membrane protein VAA_RS01050 PF14849 YidC periplasmic domain VAA_RS01055 PF10396 GTP-binding protein TrmE N-terminus VAA_RS01055 PF12631 MnmE helical domain VAA_RS01055 PF01926 50S ribosome-binding GTPase VAA_RS01060 PF00258 Flavodoxin VAA_RS01065 PF01134 Glucose inhibited division protein A VAA_RS01065 PF13932 GidA associated domain VAA_RS01070 PF02527 rRNA small subunit methyltransferase G VAA_RS01075 PF13614 AAA domain VAA_RS01080 PF02195 ParB-like nuclease domain VAA_RS01080 PF17762 HTH domain found in ParB protein VAA_RS01085 PF03899 ATP synthase I chain VAA_RS01090 PF00119 ATP synthase A chain VAA_RS01095 PF00137 ATP synthase subunit C VAA_RS01100 PF00430 ATP synthase B/B' CF(0) VAA_RS01105 PF00213 ATP synthase delta (OSCP) subunit VAA_RS01110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAA_RS01110 PF00306 ATP synthase alpha/beta chain, C terminal domain VAA_RS01110 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAA_RS01115 PF00231 ATP synthase VAA_RS01125 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VAA_RS01125 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VAA_RS01130 PF14602 Hexapeptide repeat of succinyl-transferase VAA_RS01130 PF12804 MobA-like NTP transferase domain VAA_RS01130 PF00132 Bacterial transferase hexapeptide (six repeats) VAA_RS01135 PF07690 Major Facilitator Superfamily VAA_RS01145 PF02803 Thiolase, C-terminal domain VAA_RS01145 PF00108 Thiolase, N-terminal domain VAA_RS01150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAA_RS01150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAA_RS01150 PF00378 Enoyl-CoA hydratase/isomerase VAA_RS01155 PF09186 Domain of unknown function (DUF1949) VAA_RS01155 PF01205 Uncharacterized protein family UPF0029 VAA_RS01160 PF02386 Cation transport protein VAA_RS01165 PF12724 Flavodoxin domain VAA_RS01205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VAA_RS01210 PF01964 Radical SAM ThiC family VAA_RS01210 PF13667 ThiC-associated domain VAA_RS01215 PF02581 Thiamine monophosphate synthase VAA_RS01220 PF00899 ThiF family VAA_RS01225 PF02597 ThiS family VAA_RS01230 PF05690 Thiazole biosynthesis protein ThiG VAA_RS01235 PF04055 Radical SAM superfamily VAA_RS01235 PF06968 Biotin and Thiamin Synthesis associated domain VAA_RS01240 PF00557 Metallopeptidase family M24 VAA_RS01240 PF01321 Creatinase/Prolidase N-terminal domain VAA_RS01240 PF01321 Creatinase/Prolidase N-terminal domain VAA_RS01240 PF00557 Metallopeptidase family M24 VAA_RS01245 PF03466 LysR substrate binding domain VAA_RS01245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS01250 PF07690 Major Facilitator Superfamily VAA_RS01255 PF13737 Transposase DDE domain VAA_RS01265 PF01037 Lrp/AsnC ligand binding domain VAA_RS01270 PF04445 Putative SAM-dependent methyltransferase VAA_RS01280 PF00892 EamA-like transporter family VAA_RS01285 PF00582 Universal stress protein family VAA_RS01290 PF00210 Ferritin-like domain VAA_RS01295 PF10625 Universal stress protein B (UspB) VAA_RS01310 PF06414 Zeta toxin VAA_RS01315 PF02653 Branched-chain amino acid transport system / permease component VAA_RS01320 PF00005 ABC transporter VAA_RS01325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAA_RS01330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VAA_RS01330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VAA_RS01335 PF00596 Class II Aldolase and Adducin N-terminal domain VAA_RS01340 PF02610 L-arabinose isomerase VAA_RS01340 PF11762 L-arabinose isomerase C-terminal domain VAA_RS01350 PF12833 Helix-turn-helix domain VAA_RS01350 PF02311 AraC-like ligand binding domain VAA_RS01360 PF02646 RmuC family VAA_RS01365 PF01209 ubiE/COQ5 methyltransferase family VAA_RS01370 PF02036 SCP-2 sterol transfer family VAA_RS01375 PF03109 ABC1 family VAA_RS01380 PF02416 mttA/Hcf106 family VAA_RS01385 PF02416 mttA/Hcf106 family VAA_RS01390 PF00902 Sec-independent protein translocase protein (TatC) VAA_RS01395 PF01026 TatD related DNase VAA_RS01400 PF00490 Delta-aminolevulinic acid dehydratase VAA_RS01405 PF00476 DNA polymerase family A VAA_RS01405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VAA_RS01405 PF01612 3'-5' exonuclease VAA_RS01405 PF01367 5'-3' exonuclease, C-terminal SAM fold VAA_RS01410 PF01926 50S ribosome-binding GTPase VAA_RS01415 PF00034 Cytochrome c VAA_RS01425 PF04220 Der GTPase activator (YihI) VAA_RS01430 PF10675 Protein of unknown function (DUF2489) VAA_RS01435 PF04055 Radical SAM superfamily VAA_RS01435 PF06969 HemN C-terminal domain VAA_RS01440 PF03466 LysR substrate binding domain VAA_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS01445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VAA_RS01445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VAA_RS01450 PF04380 Membrane fusogenic activity VAA_RS01455 PF00873 AcrB/AcrD/AcrF family VAA_RS01460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA_RS01465 PF08359 YsiA-like protein, C-terminal region VAA_RS01465 PF00440 Bacterial regulatory proteins, tetR family VAA_RS01470 PF00580 UvrD/REP helicase N-terminal domain VAA_RS01470 PF13361 UvrD-like helicase C-terminal domain VAA_RS01475 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAA_RS01510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA_RS01510 PF00005 ABC transporter VAA_RS01515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA_RS01520 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS01525 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS01525 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA_RS01540 PF00072 Response regulator receiver domain VAA_RS01580 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS01580 PF13007 Transposase C of IS166 homeodomain VAA_RS01580 PF13817 IS66 C-terminal element VAA_RS01580 PF03050 Transposase IS66 family VAA_RS01600 PF04245 37-kD nucleoid-associated bacterial protein VAA_RS01625 PF13007 Transposase C of IS166 homeodomain VAA_RS01625 PF13817 IS66 C-terminal element VAA_RS01625 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS01625 PF03050 Transposase IS66 family VAA_RS01635 PF07693 KAP family P-loop domain VAA_RS01650 PF13737 Transposase DDE domain VAA_RS01670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA_RS01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS01675 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VAA_RS01680 PF01432 Peptidase family M3 VAA_RS01685 PF00580 UvrD/REP helicase N-terminal domain VAA_RS01685 PF13361 UvrD-like helicase C-terminal domain VAA_RS01690 PF01810 LysE type translocator VAA_RS01700 PF00892 EamA-like transporter family VAA_RS01705 PF09382 RQC domain VAA_RS01705 PF16124 RecQ zinc-binding VAA_RS01705 PF00570 HRDC domain VAA_RS01705 PF00271 Helicase conserved C-terminal domain VAA_RS01705 PF00270 DEAD/DEAH box helicase VAA_RS01720 PF01418 Helix-turn-helix domain, rpiR family VAA_RS01720 PF01380 SIS domain VAA_RS01725 PF01380 SIS domain VAA_RS01730 PF00367 phosphotransferase system, EIIB VAA_RS01730 PF02378 Phosphotransferase system, EIIC VAA_RS01735 PF00664 ABC transporter transmembrane region VAA_RS01735 PF00005 ABC transporter VAA_RS01740 PF07715 TonB-dependent Receptor Plug Domain VAA_RS01740 PF00593 TonB dependent receptor VAA_RS01745 PF00005 ABC transporter VAA_RS01750 PF01497 Periplasmic binding protein VAA_RS01755 PF01032 FecCD transport family VAA_RS01765 PF13737 Transposase DDE domain VAA_RS01770 PF00675 Insulinase (Peptidase family M16) VAA_RS01770 PF05193 Peptidase M16 inactive domain VAA_RS01805 PF01555 DNA methylase VAA_RS01845 PF01381 Helix-turn-helix VAA_RS01860 PF08340 Domain of unknown function (DUF1732) VAA_RS01860 PF03755 YicC-like family, N-terminal region VAA_RS01865 PF03725 3' exoribonuclease family, domain 2 VAA_RS01865 PF01138 3' exoribonuclease family, domain 1 VAA_RS01870 PF00156 Phosphoribosyl transferase domain VAA_RS01875 PF03279 Bacterial lipid A biosynthesis acyltransferase VAA_RS01880 PF03279 Bacterial lipid A biosynthesis acyltransferase VAA_RS01885 PF00440 Bacterial regulatory proteins, tetR family VAA_RS01890 PF02441 Flavoprotein VAA_RS01890 PF04127 DNA / pantothenate metabolism flavoprotein VAA_RS01895 PF04002 RadC-like JAB domain VAA_RS01900 PF00830 Ribosomal L28 family VAA_RS01905 PF00471 Ribosomal protein L33 VAA_RS01915 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VAA_RS01915 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VAA_RS01915 PF06827 Zinc finger found in FPG and IleRS VAA_RS01920 PF01467 Cytidylyltransferase-like VAA_RS01925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAA_RS01930 PF00535 Glycosyl transferase family 2 VAA_RS01935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAA_RS01955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAA_RS01960 PF00132 Bacterial transferase hexapeptide (six repeats) VAA_RS01965 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VAA_RS01970 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VAA_RS01980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAA_RS01985 PF04932 O-Antigen ligase VAA_RS01995 PF01370 NAD dependent epimerase/dehydratase family VAA_RS02000 PF16363 GDP-mannose 4,6 dehydratase VAA_RS02005 PF00483 Nucleotidyl transferase VAA_RS02010 PF04321 RmlD substrate binding domain VAA_RS02015 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VAA_RS02020 PF01061 ABC-2 type transporter VAA_RS02025 PF00005 ABC transporter VAA_RS02045 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA_RS02045 PF00970 Oxidoreductase FAD-binding domain VAA_RS02045 PF00175 Oxidoreductase NAD-binding domain VAA_RS02050 PF00483 Nucleotidyl transferase VAA_RS02055 PF16363 GDP-mannose 4,6 dehydratase VAA_RS02060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAA_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA_RS02065 PF00205 Thiamine pyrophosphate enzyme, central domain VAA_RS02075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAA_RS02080 PF00535 Glycosyl transferase family 2 VAA_RS02090 PF05523 WxcM-like, C-terminal VAA_RS02100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAA_RS02105 PF00535 Glycosyl transferase family 2 VAA_RS02110 PF05045 Rhamnan synthesis protein F VAA_RS02115 PF00535 Glycosyl transferase family 2 VAA_RS02125 PF02719 Polysaccharide biosynthesis protein VAA_RS02130 PF01370 NAD dependent epimerase/dehydratase family VAA_RS02135 PF02397 Bacterial sugar transferase VAA_RS02145 PF06082 Exopolysaccharide biosynthesis protein YbjH VAA_RS02155 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VAA_RS02165 PF02563 Polysaccharide biosynthesis/export protein VAA_RS02165 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VAA_RS02165 PF10531 SLBB domain VAA_RS02170 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAA_RS02175 PF02706 Chain length determinant protein VAA_RS02175 PF13807 G-rich domain on putative tyrosine kinase VAA_RS02175 PF13614 AAA domain VAA_RS02205 PF02223 Thymidylate kinase VAA_RS02210 PF13439 Glycosyltransferase Family 4 VAA_RS02210 PF00534 Glycosyl transferases group 1 VAA_RS02215 PF01370 NAD dependent epimerase/dehydratase family VAA_RS02220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VAA_RS02220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAA_RS02220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAA_RS02225 PF00953 Glycosyl transferase family 4 VAA_RS02230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VAA_RS02230 PF00753 Metallo-beta-lactamase superfamily VAA_RS02230 PF10996 Beta-Casp domain VAA_RS02235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS02235 PF00672 HAMP domain VAA_RS02235 PF02743 Cache domain VAA_RS02240 PF00924 Mechanosensitive ion channel VAA_RS02245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA_RS02250 PF04222 Protein of unknown function (DUF416) VAA_RS02255 PF04480 Protein of unknown function (DUF559) VAA_RS02260 PF00571 CBS domain VAA_RS02260 PF01595 Cyclin M transmembrane N-terminal domain VAA_RS02265 PF00216 Bacterial DNA-binding protein VAA_RS02275 PF02844 Phosphoribosylglycinamide synthetase, N domain VAA_RS02275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VAA_RS02275 PF02843 Phosphoribosylglycinamide synthetase, C domain VAA_RS02285 PF13411 MerR HTH family regulatory protein VAA_RS02295 PF02954 Bacterial regulatory protein, Fis family VAA_RS02300 PF01207 Dihydrouridine synthase (Dus) VAA_RS02310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAA_RS02310 PF00289 Biotin carboxylase, N-terminal domain VAA_RS02310 PF02785 Biotin carboxylase C-terminal domain VAA_RS02315 PF00364 Biotin-requiring enzyme VAA_RS02320 PF01220 Dehydroquinase class II VAA_RS02325 PF00501 AMP-binding enzyme VAA_RS02325 PF13193 AMP-binding enzyme C-terminal domain VAA_RS02325 PF16177 Acetyl-coenzyme A synthetase N-terminus VAA_RS02340 PF12832 MFS_1 like family VAA_RS02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS02345 PF00672 HAMP domain VAA_RS02345 PF00072 Response regulator receiver domain VAA_RS02345 PF01627 Hpt domain VAA_RS02345 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS02350 PF00474 Sodium:solute symporter family VAA_RS02360 PF00999 Sodium/hydrogen exchanger family VAA_RS02360 PF03471 Transporter associated domain VAA_RS02360 PF02080 TrkA-C domain VAA_RS02365 PF00072 Response regulator receiver domain VAA_RS02365 PF00196 Bacterial regulatory proteins, luxR family VAA_RS02370 PF11412 Disulphide bond corrector protein DsbC VAA_RS02370 PF02683 Cytochrome C biogenesis protein transmembrane region VAA_RS02375 PF01316 Arginine repressor, DNA binding domain VAA_RS02375 PF02863 Arginine repressor, C-terminal domain VAA_RS02380 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VAA_RS02380 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VAA_RS02385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAA_RS02385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAA_RS02395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAA_RS02395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAA_RS02400 PF00696 Amino acid kinase family VAA_RS02410 PF03606 C4-dicarboxylate anaerobic carrier VAA_RS02420 PF00206 Lyase VAA_RS02420 PF10415 Fumarase C C-terminus VAA_RS02425 PF04186 FxsA cytoplasmic membrane protein VAA_RS02430 PF00313 'Cold-shock' DNA-binding domain VAA_RS02435 PF00588 SpoU rRNA Methylase family VAA_RS02440 PF00672 HAMP domain VAA_RS02440 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS02440 PF16527 Two-component sensor protein CpxA, periplasmic domain VAA_RS02440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS02445 PF00072 Response regulator receiver domain VAA_RS02445 PF00486 Transcriptional regulatory protein, C terminal VAA_RS02455 PF16916 Dimerisation domain of Zinc Transporter VAA_RS02455 PF01545 Cation efflux family VAA_RS02460 PF00365 Phosphofructokinase VAA_RS02465 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VAA_RS02470 PF06005 Cell division protein ZapB VAA_RS02475 PF02219 Methylenetetrahydrofolate reductase VAA_RS02480 PF00742 Homoserine dehydrogenase VAA_RS02480 PF00696 Amino acid kinase family VAA_RS02480 PF03447 Homoserine dehydrogenase, NAD binding domain VAA_RS02485 PF01053 Cys/Met metabolism PLP-dependent enzyme VAA_RS02490 PF01340 Met Apo-repressor, MetJ VAA_RS02495 PF03949 Malic enzyme, NAD binding domain VAA_RS02495 PF00390 Malic enzyme, N-terminal domain VAA_RS02500 PF01197 Ribosomal protein L31 VAA_RS02505 PF18074 Primosomal protein N C-terminal domain VAA_RS02505 PF17764 3′ DNA-binding domain (3′BD) VAA_RS02505 PF00271 Helicase conserved C-terminal domain VAA_RS02505 PF00270 DEAD/DEAH box helicase VAA_RS02505 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VAA_RS02510 PF00356 Bacterial regulatory proteins, lacI family VAA_RS02520 PF00227 Proteasome subunit VAA_RS02525 PF00004 ATPase family associated with various cellular activities (AAA) VAA_RS02525 PF07724 AAA domain (Cdc48 subfamily) VAA_RS02525 PF10431 C-terminal, D2-small domain, of ClpB protein VAA_RS02530 PF01040 UbiA prenyltransferase family VAA_RS02535 PF03737 Aldolase/RraA VAA_RS02540 PF01554 MatE VAA_RS02545 PF00121 Triosephosphate isomerase VAA_RS02570 PF00166 Chaperonin 10 Kd subunit VAA_RS02575 PF00118 TCP-1/cpn60 chaperonin family VAA_RS02585 PF02308 MgtC family VAA_RS02590 PF04055 Radical SAM superfamily VAA_RS02595 PF01132 Elongation factor P (EF-P) OB domain VAA_RS02595 PF08207 Elongation factor P (EF-P) KOW-like domain VAA_RS02595 PF09285 Elongation factor P, C-terminal VAA_RS02600 PF02313 Fumarate reductase subunit D VAA_RS02605 PF02300 Fumarate reductase subunit C VAA_RS02610 PF13183 4Fe-4S dicluster domain VAA_RS02610 PF13085 2Fe-2S iron-sulfur cluster binding domain VAA_RS02615 PF02910 Fumarate reductase flavoprotein C-term VAA_RS02615 PF00890 FAD binding domain VAA_RS02620 PF00152 tRNA synthetases class II (D, K and N) VAA_RS02625 PF00581 Rhodanese-like domain VAA_RS02630 PF02556 Preprotein translocase subunit SecB VAA_RS02635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VAA_RS02635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VAA_RS02640 PF00132 Bacterial transferase hexapeptide (six repeats) VAA_RS02640 PF06426 Serine acetyltransferase, N-terminal VAA_RS02650 PF00311 Phosphoenolpyruvate carboxylase VAA_RS02655 PF07687 Peptidase dimerisation domain VAA_RS02655 PF01546 Peptidase family M20/M25/M40 VAA_RS02660 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAA_RS02660 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAA_RS02665 PF00696 Amino acid kinase family VAA_RS02675 PF00583 Acetyltransferase (GNAT) family VAA_RS02675 PF00206 Lyase VAA_RS02675 PF14698 Argininosuccinate lyase C-terminal VAA_RS02685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA_RS02685 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS02690 PF08534 Redoxin VAA_RS02690 PF00462 Glutaredoxin VAA_RS02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS02695 PF03466 LysR substrate binding domain VAA_RS02700 PF00905 Penicillin binding protein transpeptidase domain VAA_RS02700 PF17092 Penicillin-binding protein OB-like domain VAA_RS02700 PF00912 Transglycosylase VAA_RS02725 PF11741 AMIN domain VAA_RS02725 PF07660 Secretin and TonB N terminus short domain VAA_RS02725 PF00263 Bacterial type II and III secretion system protein VAA_RS02725 PF03958 Bacterial type II/III secretion system short domain VAA_RS02730 PF01202 Shikimate kinase VAA_RS02735 PF01761 3-dehydroquinate synthase VAA_RS02745 PF02086 D12 class N6 adenine-specific DNA methyltransferase VAA_RS02750 PF00834 Ribulose-phosphate 3 epimerase family VAA_RS02755 PF13419 Haloacid dehalogenase-like hydrolase VAA_RS02760 PF00579 tRNA synthetases class I (W and Y) VAA_RS02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS02775 PF03466 LysR substrate binding domain VAA_RS02785 PF01494 FAD binding domain VAA_RS02795 PF00117 Glutamine amidotransferase class-I VAA_RS02800 PF00202 Aminotransferase class-III VAA_RS02805 PF04958 Arginine N-succinyltransferase beta subunit VAA_RS02810 PF00171 Aldehyde dehydrogenase family VAA_RS02820 PF13545 Crp-like helix-turn-helix domain VAA_RS02820 PF00027 Cyclic nucleotide-binding domain VAA_RS02825 PF00485 Phosphoribulokinase / Uridine kinase family VAA_RS02830 PF06794 Uncharacterised protein family (UPF0270) VAA_RS02835 PF00561 alpha/beta hydrolase fold VAA_RS02845 PF00005 ABC transporter VAA_RS02845 PF12848 ABC transporter VAA_RS02850 PF02525 Flavodoxin-like fold VAA_RS02855 PF00999 Sodium/hydrogen exchanger family VAA_RS02855 PF02254 TrkA-N domain VAA_RS02860 PF09526 Probable metal-binding protein (DUF2387) VAA_RS02865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA_RS02870 PF01112 Asparaginase VAA_RS02875 PF00709 Adenylosuccinate synthetase VAA_RS02880 PF08238 Sel1 repeat VAA_RS02885 PF00575 S1 RNA binding domain VAA_RS02885 PF00773 RNB domain VAA_RS02885 PF08206 Ribonuclease B OB domain VAA_RS02885 PF08461 Ribonuclease R winged-helix domain VAA_RS02885 PF17876 Cold shock domain VAA_RS02895 PF00338 Ribosomal protein S10p/S20e VAA_RS02900 PF00297 Ribosomal protein L3 VAA_RS02905 PF00573 Ribosomal protein L4/L1 family VAA_RS02910 PF00276 Ribosomal protein L23 VAA_RS02915 PF03947 Ribosomal Proteins L2, C-terminal domain VAA_RS02915 PF00181 Ribosomal Proteins L2, RNA binding domain VAA_RS02920 PF00203 Ribosomal protein S19 VAA_RS02925 PF00237 Ribosomal protein L22p/L17e VAA_RS02930 PF07650 KH domain VAA_RS02930 PF00189 Ribosomal protein S3, C-terminal domain VAA_RS02935 PF00252 Ribosomal protein L16p/L10e VAA_RS02940 PF00831 Ribosomal L29 protein VAA_RS02945 PF00366 Ribosomal protein S17 VAA_RS02950 PF00238 Ribosomal protein L14p/L23e VAA_RS02955 PF00467 KOW motif VAA_RS02955 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VAA_RS02960 PF00281 Ribosomal protein L5 VAA_RS02960 PF00673 ribosomal L5P family C-terminus VAA_RS02965 PF00253 Ribosomal protein S14p/S29e VAA_RS02970 PF00410 Ribosomal protein S8 VAA_RS02975 PF00347 Ribosomal protein L6 VAA_RS02980 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VAA_RS02985 PF03719 Ribosomal protein S5, C-terminal domain VAA_RS02985 PF00333 Ribosomal protein S5, N-terminal domain VAA_RS02990 PF00327 Ribosomal protein L30p/L7e VAA_RS02995 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VAA_RS03000 PF00344 SecY translocase VAA_RS03005 PF00444 Ribosomal protein L36 VAA_RS03010 PF00416 Ribosomal protein S13/S18 VAA_RS03015 PF00411 Ribosomal protein S11 VAA_RS03020 PF01479 S4 domain VAA_RS03020 PF00163 Ribosomal protein S4/S9 N-terminal domain VAA_RS03025 PF01000 RNA polymerase Rpb3/RpoA insert domain VAA_RS03025 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VAA_RS03025 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VAA_RS03030 PF01196 Ribosomal protein L17 VAA_RS03035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAA_RS03035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA_RS03040 PF04225 Opacity-associated protein A LysM-like domain VAA_RS03040 PF08525 Opacity-associated protein A N-terminal motif VAA_RS03045 PF13673 Acetyltransferase (GNAT) domain VAA_RS03050 PF00271 Helicase conserved C-terminal domain VAA_RS03050 PF03880 DbpA RNA binding domain VAA_RS03050 PF00270 DEAD/DEAH box helicase VAA_RS03090 PF02872 5'-nucleotidase, C-terminal domain VAA_RS03090 PF00149 Calcineurin-like phosphoesterase VAA_RS03095 PF14824 Sirohaem biosynthesis protein central VAA_RS03095 PF10414 Sirohaem synthase dimerisation region VAA_RS03095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAA_RS03100 PF01507 Phosphoadenosine phosphosulfate reductase family VAA_RS03105 PF00009 Elongation factor Tu GTP binding domain VAA_RS03130 PF00005 ABC transporter VAA_RS03145 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VAA_RS03150 PF01625 Peptide methionine sulfoxide reductase VAA_RS03155 PF01103 Surface antigen VAA_RS03155 PF07244 Surface antigen variable number repeat VAA_RS03155 PF17243 POTRA domain TamA domain 1 VAA_RS03160 PF04357 TamB, inner membrane protein subunit of TAM complex VAA_RS03165 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VAA_RS03170 PF00719 Inorganic pyrophosphatase VAA_RS03175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VAA_RS03180 PF01225 Mur ligase family, catalytic domain VAA_RS03180 PF02875 Mur ligase family, glutamate ligase domain VAA_RS03180 PF08245 Mur ligase middle domain VAA_RS03185 PF02441 Flavoprotein VAA_RS03195 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS03200 PF00005 ABC transporter VAA_RS03205 PF04751 Protein of unknown function (DUF615) VAA_RS03210 PF01523 Putative modulator of DNA gyrase VAA_RS03215 PF03448 MgtE intracellular N domain VAA_RS03215 PF01769 Divalent cation transporter VAA_RS03215 PF00571 CBS domain VAA_RS03220 PF00381 PTS HPr component phosphorylation site VAA_RS03225 PF03668 P-loop ATPase protein family VAA_RS03230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA_RS03235 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VAA_RS03240 PF04552 Sigma-54, DNA binding domain VAA_RS03240 PF00309 Sigma-54 factor, Activator interacting domain (AID) VAA_RS03240 PF04963 Sigma-54 factor, core binding domain VAA_RS03245 PF00005 ABC transporter VAA_RS03245 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAA_RS03250 PF03968 OstA-like protein VAA_RS03265 PF00571 CBS domain VAA_RS03265 PF01380 SIS domain VAA_RS03275 PF00005 ABC transporter VAA_RS03280 PF02405 Permease MlaE VAA_RS03285 PF02470 MlaD protein VAA_RS03290 PF05494 MlaC protein VAA_RS03300 PF01722 BolA-like protein VAA_RS03305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAA_RS03310 PF01553 Acyltransferase VAA_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS03315 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS03315 PF08448 PAS fold VAA_RS03315 PF00072 Response regulator receiver domain VAA_RS03315 PF13188 PAS domain VAA_RS03325 PF01042 Endoribonuclease L-PSP VAA_RS03330 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VAA_RS03330 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VAA_RS03335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAA_RS03335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAA_RS03340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAA_RS03340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAA_RS03345 PF13638 PIN domain VAA_RS03345 PF02562 PhoH-like protein VAA_RS03355 PF00176 SNF2 family N-terminal domain VAA_RS03355 PF12137 RNA polymerase recycling family C-terminal VAA_RS03355 PF00271 Helicase conserved C-terminal domain VAA_RS03355 PF18339 RapA N-terminal Tudor like domain 1 VAA_RS03355 PF18337 RapA N-terminal Tudor like domain VAA_RS03365 PF00849 RNA pseudouridylate synthase VAA_RS03370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA_RS03370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA_RS03375 PF08264 Anticodon-binding domain of tRNA VAA_RS03375 PF00133 tRNA synthetases class I (I, L, M and V) VAA_RS03375 PF10458 Valyl tRNA synthetase tRNA binding arm VAA_RS03380 PF04364 DNA polymerase III chi subunit, HolC VAA_RS03385 PF02789 Cytosol aminopeptidase family, N-terminal domain VAA_RS03385 PF00883 Cytosol aminopeptidase family, catalytic domain VAA_RS03390 PF03739 Lipopolysaccharide export system permease LptF/LptG VAA_RS03395 PF03739 Lipopolysaccharide export system permease LptF/LptG VAA_RS03490 PF00694 Aconitase C-terminal domain VAA_RS03495 PF00330 Aconitase family (aconitate hydratase) VAA_RS03500 PF00180 Isocitrate/isopropylmalate dehydrogenase VAA_RS03505 PF08502 LeuA allosteric (dimerisation) domain VAA_RS03505 PF00682 HMGL-like VAA_RS03510 PF01569 PAP2 superfamily VAA_RS03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS03520 PF03466 LysR substrate binding domain VAA_RS03525 PF00501 AMP-binding enzyme VAA_RS03530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA_RS03530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA_RS03530 PF00205 Thiamine pyrophosphate enzyme, central domain VAA_RS03535 PF10369 Small subunit of acetolactate synthase VAA_RS03540 PF01842 ACT domain VAA_RS03540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA_RS03540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA_RS03545 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VAA_RS03550 PF01812 5-formyltetrahydrofolate cyclo-ligase family VAA_RS03555 PF05164 Cell division protein ZapA VAA_RS03560 PF03695 Uncharacterised protein family (UPF0149) VAA_RS03565 PF01494 FAD binding domain VAA_RS03570 PF01494 FAD binding domain VAA_RS03590 PF03937 Flavinator of succinate dehydrogenase VAA_RS03600 PF00890 FAD binding domain VAA_RS03600 PF02910 Fumarate reductase flavoprotein C-term VAA_RS03605 PF04542 Sigma-70 region 2 VAA_RS03605 PF08281 Sigma-70, region 4 VAA_RS03610 PF03873 Anti sigma-E protein RseA, C-terminal domain VAA_RS03610 PF03872 Anti sigma-E protein RseA, N-terminal domain VAA_RS03615 PF03888 MucB/RseB N-terminal domain VAA_RS03615 PF17188 MucB/RseB C-terminal domain VAA_RS03625 PF06421 GTP-binding protein LepA C-terminus VAA_RS03625 PF03144 Elongation factor Tu domain 2 VAA_RS03625 PF00009 Elongation factor Tu GTP binding domain VAA_RS03625 PF00679 Elongation factor G C-terminus VAA_RS03630 PF10502 Signal peptidase, peptidase S26 VAA_RS03635 PF00035 Double-stranded RNA binding motif VAA_RS03635 PF14622 Ribonuclease-III-like VAA_RS03640 PF01926 50S ribosome-binding GTPase VAA_RS03640 PF07650 KH domain VAA_RS03645 PF02565 Recombination protein O C terminal VAA_RS03645 PF11967 Recombination protein O N terminal VAA_RS03650 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VAA_RS03655 PF01648 4'-phosphopantetheinyl transferase superfamily VAA_RS03665 PF01938 TRAM domain VAA_RS03665 PF05958 tRNA (Uracil-5-)-methyltransferase VAA_RS03670 PF02824 TGS domain VAA_RS03670 PF04607 Region found in RelA / SpoT proteins VAA_RS03670 PF13291 ACT domain VAA_RS03675 PF03819 MazG nucleotide pyrophosphohydrolase domain VAA_RS03680 PF06418 CTP synthase N-terminus VAA_RS03680 PF00117 Glutamine amidotransferase class-I VAA_RS03685 PF00113 Enolase, C-terminal TIM barrel domain VAA_RS03685 PF03952 Enolase, N-terminal domain VAA_RS03690 PF12627 Probable RNA and SrmB- binding site of polymerase A VAA_RS03690 PF01743 Poly A polymerase head domain VAA_RS03690 PF01966 HD domain VAA_RS03695 PF01471 Putative peptidoglycan binding domain VAA_RS03695 PF13401 AAA domain VAA_RS03705 PF08239 Bacterial SH3 domain VAA_RS03710 PF01384 Phosphate transporter family VAA_RS03715 PF01865 Protein of unknown function DUF47 VAA_RS03720 PF01928 CYTH domain VAA_RS03730 PF00672 HAMP domain VAA_RS03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS03740 PF01467 Cytidylyltransferase-like VAA_RS03740 PF00294 pfkB family carbohydrate kinase VAA_RS03750 PF00293 NUDIX domain VAA_RS03755 PF06853 Protein of unknown function (DUF1249) VAA_RS03760 PF00149 Calcineurin-like phosphoesterase VAA_RS03765 PF05728 Uncharacterised protein family (UPF0227) VAA_RS03770 PF01751 Toprim domain VAA_RS03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS03770 PF00986 DNA gyrase B subunit, carboxyl terminus VAA_RS03770 PF00204 DNA gyrase B VAA_RS03775 PF03989 DNA gyrase C-terminal domain, beta-propeller VAA_RS03775 PF00521 DNA gyrase/topoisomerase IV, subunit A VAA_RS03780 PF13180 PDZ domain VAA_RS03785 PF00595 PDZ domain VAA_RS03790 PF06295 Protein of unknown function (DUF1043) VAA_RS03795 PF03969 AFG1-like ATPase VAA_RS03805 PF00572 Ribosomal protein L13 VAA_RS03810 PF00380 Ribosomal protein S9/S16 VAA_RS03815 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VAA_RS03815 PF00355 Rieske [2Fe-2S] domain VAA_RS03820 PF00033 Cytochrome b/b6/petB VAA_RS03820 PF00032 Cytochrome b(C-terminal)/b6/petD VAA_RS03825 PF02167 Cytochrome C1 family VAA_RS03830 PF00043 Glutathione S-transferase, C-terminal domain VAA_RS03830 PF02798 Glutathione S-transferase, N-terminal domain VAA_RS03835 PF04386 Stringent starvation protein B VAA_RS03840 PF04972 BON domain VAA_RS03845 PF13580 SIS domain VAA_RS03850 PF02021 Uncharacterised protein family UPF0102 VAA_RS03855 PF04348 LppC putative lipoprotein VAA_RS03860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAA_RS03865 PF01795 MraW methylase family VAA_RS03870 PF04999 Cell division protein FtsL VAA_RS03875 PF00905 Penicillin binding protein transpeptidase domain VAA_RS03875 PF03717 Penicillin-binding Protein dimerisation domain VAA_RS03880 PF02875 Mur ligase family, glutamate ligase domain VAA_RS03880 PF08245 Mur ligase middle domain VAA_RS03880 PF01225 Mur ligase family, catalytic domain VAA_RS03885 PF02875 Mur ligase family, glutamate ligase domain VAA_RS03885 PF08245 Mur ligase middle domain VAA_RS03885 PF01225 Mur ligase family, catalytic domain VAA_RS03890 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VAA_RS03890 PF00953 Glycosyl transferase family 4 VAA_RS03895 PF02875 Mur ligase family, glutamate ligase domain VAA_RS03895 PF08245 Mur ligase middle domain VAA_RS03900 PF01098 Cell cycle protein VAA_RS03905 PF04101 Glycosyltransferase family 28 C-terminal domain VAA_RS03905 PF03033 Glycosyltransferase family 28 N-terminal domain VAA_RS03910 PF02875 Mur ligase family, glutamate ligase domain VAA_RS03910 PF08245 Mur ligase middle domain VAA_RS03910 PF01225 Mur ligase family, catalytic domain VAA_RS03915 PF03799 Cell division protein FtsQ VAA_RS03915 PF08478 POTRA domain, FtsQ-type VAA_RS03920 PF02491 SHS2 domain inserted in FTSA VAA_RS03925 PF00091 Tubulin/FtsZ family, GTPase domain VAA_RS03925 PF12327 FtsZ family, C-terminal domain VAA_RS03930 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VAA_RS03940 PF02810 SEC-C motif VAA_RS03940 PF07516 SecA Wing and Scaffold domain VAA_RS03940 PF01043 SecA preprotein cross-linking domain VAA_RS03940 PF07517 SecA DEAD-like domain VAA_RS03945 PF00293 NUDIX domain VAA_RS03950 PF05173 Dihydrodipicolinate reductase, C-terminus VAA_RS03950 PF01113 Dihydrodipicolinate reductase, N-terminus VAA_RS03955 PF00117 Glutamine amidotransferase class-I VAA_RS03955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VAA_RS03960 PF02142 MGS-like domain VAA_RS03960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAA_RS03960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VAA_RS03965 PF01925 Sulfite exporter TauE/SafE VAA_RS03970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS03970 PF03466 LysR substrate binding domain VAA_RS03975 PF03458 UPF0126 domain VAA_RS03980 PF01497 Periplasmic binding protein VAA_RS03990 PF01048 Phosphorylase superfamily VAA_RS04000 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS04000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAA_RS04005 PF01493 GXGXG motif VAA_RS04005 PF01645 Conserved region in glutamate synthase VAA_RS04005 PF04898 Glutamate synthase central domain VAA_RS04005 PF00310 Glutamine amidotransferases class-II VAA_RS04010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAA_RS04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS04015 PF01645 Conserved region in glutamate synthase VAA_RS04015 PF04898 Glutamate synthase central domain VAA_RS04015 PF00310 Glutamine amidotransferases class-II VAA_RS04015 PF01493 GXGXG motif VAA_RS04020 PF16199 Radical_SAM C-terminal domain VAA_RS04020 PF04055 Radical SAM superfamily VAA_RS04025 PF18415 Histidine kinase receptor ArcB trans-membrane domain VAA_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS04025 PF00989 PAS fold VAA_RS04025 PF01627 Hpt domain VAA_RS04025 PF00072 Response regulator receiver domain VAA_RS04025 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS04035 PF00072 Response regulator receiver domain VAA_RS04035 PF00486 Transcriptional regulatory protein, C terminal VAA_RS04040 PF03737 Aldolase/RraA VAA_RS04050 PF01842 ACT domain VAA_RS04050 PF00696 Amino acid kinase family VAA_RS04050 PF13840 ACT domain VAA_RS04050 PF00742 Homoserine dehydrogenase VAA_RS04050 PF03447 Homoserine dehydrogenase, NAD binding domain VAA_RS04055 PF00288 GHMP kinases N terminal domain VAA_RS04055 PF08544 GHMP kinases C terminal VAA_RS04060 PF14821 Threonine synthase N terminus VAA_RS04060 PF00291 Pyridoxal-phosphate dependent enzyme VAA_RS04065 PF01228 Glycine radical VAA_RS04070 PF01261 Xylose isomerase-like TIM barrel VAA_RS04075 PF03167 Uracil DNA glycosylase superfamily VAA_RS04090 PF01235 Sodium:alanine symporter family VAA_RS04100 PF01026 TatD related DNase VAA_RS04105 PF07670 Nucleoside recognition VAA_RS04105 PF07662 Na+ dependent nucleoside transporter C-terminus VAA_RS04105 PF01773 Na+ dependent nucleoside transporter N-terminus VAA_RS04110 PF01791 DeoC/LacD family aldolase VAA_RS04115 PF00591 Glycosyl transferase family, a/b domain VAA_RS04115 PF02885 Glycosyl transferase family, helical bundle domain VAA_RS04115 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VAA_RS04120 PF01676 Metalloenzyme superfamily VAA_RS04125 PF01048 Phosphorylase superfamily VAA_RS04135 PF18429 Domain of unknown function (DUF5609) VAA_RS04145 PF18073 Rubredoxin metal binding domain VAA_RS04155 PF09905 DNA-binding protein VF530 VAA_RS04160 PF00501 AMP-binding enzyme VAA_RS04165 PF11849 Domain of unknown function (DUF3369) VAA_RS04180 PF16363 GDP-mannose 4,6 dehydratase VAA_RS04185 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VAA_RS04185 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VAA_RS04190 PF10509 Galactokinase galactose-binding signature VAA_RS04190 PF08544 GHMP kinases C terminal VAA_RS04190 PF00288 GHMP kinases N terminal domain VAA_RS04195 PF00356 Bacterial regulatory proteins, lacI family VAA_RS04205 PF01544 CorA-like Mg2+ transporter protein VAA_RS04215 PF00583 Acetyltransferase (GNAT) family VAA_RS04225 PF14602 Hexapeptide repeat of succinyl-transferase VAA_RS04225 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VAA_RS04230 PF07130 YebG protein VAA_RS04245 PF17946 RecC C-terminal domain VAA_RS04250 PF00580 UvrD/REP helicase N-terminal domain VAA_RS04250 PF12705 PD-(D/E)XK nuclease superfamily VAA_RS04250 PF13361 UvrD-like helicase C-terminal domain VAA_RS04255 PF13538 UvrD-like helicase C-terminal domain VAA_RS04265 PF00583 Acetyltransferase (GNAT) family VAA_RS04265 PF00696 Amino acid kinase family VAA_RS04275 PF06725 3D domain VAA_RS04275 PF03562 MltA specific insert domain VAA_RS04280 PF00899 ThiF family VAA_RS04285 PF02657 Fe-S metabolism associated domain VAA_RS04290 PF00266 Aminotransferase class-V VAA_RS04295 PF01965 DJ-1/PfpI family VAA_RS04300 PF02558 Ketopantoate reductase PanE/ApbA VAA_RS04300 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAA_RS04305 PF03502 Nucleoside-specific channel-forming protein, Tsx VAA_RS04315 PF04545 Sigma-70, region 4 VAA_RS04315 PF04542 Sigma-70 region 2 VAA_RS04325 PF07690 Major Facilitator Superfamily VAA_RS04330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAA_RS04340 PF05175 Methyltransferase small domain VAA_RS04345 PF01722 BolA-like protein VAA_RS04350 PF11973 NQRA C-terminal domain VAA_RS04350 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VAA_RS04355 PF03116 NQR2, RnfD, RnfE family VAA_RS04360 PF04205 FMN-binding domain VAA_RS04365 PF02508 Rnf-Nqr subunit, membrane protein VAA_RS04370 PF02508 Rnf-Nqr subunit, membrane protein VAA_RS04375 PF00175 Oxidoreductase NAD-binding domain VAA_RS04375 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA_RS04375 PF00970 Oxidoreductase FAD-binding domain VAA_RS04380 PF02424 ApbE family VAA_RS04390 PF11798 IMS family HHH motif VAA_RS04390 PF11799 impB/mucB/samB family C-terminal domain VAA_RS04390 PF00817 impB/mucB/samB family VAA_RS04405 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS04405 PF01590 GAF domain VAA_RS04405 PF00360 Phytochrome region VAA_RS04405 PF00563 EAL domain VAA_RS04410 PF00209 Sodium:neurotransmitter symporter family VAA_RS04420 PF08443 RimK-like ATP-grasp domain VAA_RS04420 PF18030 RimK PreATP-grasp domain VAA_RS04425 PF18030 RimK PreATP-grasp domain VAA_RS04425 PF08443 RimK-like ATP-grasp domain VAA_RS04430 PF01546 Peptidase family M20/M25/M40 VAA_RS04430 PF07687 Peptidase dimerisation domain VAA_RS04435 PF00860 Permease family VAA_RS04440 PF00156 Phosphoribosyl transferase domain VAA_RS04450 PF07417 Sigma factor-binding transcriptional regulator Crl VAA_RS04455 PF00696 Amino acid kinase family VAA_RS04455 PF01472 PUA domain VAA_RS04460 PF00171 Aldehyde dehydrogenase family VAA_RS04465 PF03477 ATP cone domain VAA_RS04470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAA_RS04470 PF01872 RibD C-terminal domain VAA_RS04475 PF00677 Lumazine binding domain VAA_RS04480 PF00925 GTP cyclohydrolase II VAA_RS04480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VAA_RS04485 PF00885 6,7-dimethyl-8-ribityllumazine synthase VAA_RS04490 PF01029 NusB family VAA_RS04495 PF02769 AIR synthase related protein, C-terminal domain VAA_RS04495 PF00586 AIR synthase related protein, N-terminal domain VAA_RS04500 PF04608 Phosphatidylglycerophosphatase A VAA_RS04505 PF11944 Protein of unknown function (DUF3461) VAA_RS04510 PF01842 ACT domain VAA_RS04510 PF08335 GlnD PII-uridylyltransferase VAA_RS04510 PF01966 HD domain VAA_RS04510 PF01909 Nucleotidyltransferase domain VAA_RS04515 PF00557 Metallopeptidase family M24 VAA_RS04520 PF00318 Ribosomal protein S2 VAA_RS04525 PF00889 Elongation factor TS VAA_RS04530 PF00696 Amino acid kinase family VAA_RS04535 PF01765 Ribosome recycling factor VAA_RS04540 PF01255 Putative undecaprenyl diphosphate synthase VAA_RS04550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VAA_RS04550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VAA_RS04550 PF13288 DXP reductoisomerase C-terminal domain VAA_RS04555 PF02163 Peptidase family M50 VAA_RS04555 PF17820 PDZ domain VAA_RS04560 PF01103 Surface antigen VAA_RS04560 PF07244 Surface antigen variable number repeat VAA_RS04565 PF03938 Outer membrane protein (OmpH-like) VAA_RS04570 PF00132 Bacterial transferase hexapeptide (six repeats) VAA_RS04570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VAA_RS04575 PF07977 FabA-like domain VAA_RS04580 PF00132 Bacterial transferase hexapeptide (six repeats) VAA_RS04580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VAA_RS04585 PF02684 Lipid-A-disaccharide synthetase VAA_RS04590 PF01351 Ribonuclease HII VAA_RS04595 PF01336 OB-fold nucleic acid binding domain VAA_RS04595 PF02811 PHP domain VAA_RS04595 PF07733 Bacterial DNA polymerase III alpha NTPase domain VAA_RS04595 PF14579 Helix-hairpin-helix motif VAA_RS04595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VAA_RS04600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VAA_RS04605 PF01171 PP-loop family VAA_RS04605 PF09179 TilS substrate binding domain VAA_RS04605 PF11734 TilS substrate C-terminal domain VAA_RS04610 PF00034 Cytochrome c VAA_RS04615 PF00543 Nitrogen regulatory protein P-II VAA_RS04620 PF03372 Endonuclease/Exonuclease/phosphatase family VAA_RS04630 PF01476 LysM domain VAA_RS04630 PF01464 Transglycosylase SLT domain VAA_RS04635 PF16123 Hydroxyacylglutathione hydrolase C-terminus VAA_RS04635 PF00753 Metallo-beta-lactamase superfamily VAA_RS04640 PF08241 Methyltransferase domain VAA_RS04645 PF00075 RNase H VAA_RS04650 PF00929 Exonuclease VAA_RS04660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAA_RS04660 PF02770 Acyl-CoA dehydrogenase, middle domain VAA_RS04660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAA_RS04660 PF09317 Domain of unknown function (DUF1974) VAA_RS04665 PF13580 SIS domain VAA_RS04670 PF13230 Glutamine amidotransferases class-II VAA_RS04675 PF00551 Formyl transferase VAA_RS04680 PF02769 AIR synthase related protein, C-terminal domain VAA_RS04680 PF00586 AIR synthase related protein, N-terminal domain VAA_RS04690 PF01479 S4 domain VAA_RS04690 PF00849 RNA pseudouridylate synthase VAA_RS04705 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VAA_RS04705 PF02838 Glycosyl hydrolase family 20, domain 2 VAA_RS04705 PF00728 Glycosyl hydrolase family 20, catalytic domain VAA_RS04705 PF03173 Putative carbohydrate binding domain VAA_RS04715 PF00403 Heavy-metal-associated domain VAA_RS04720 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAA_RS04725 PF00691 OmpA family VAA_RS04725 PF01389 OmpA-like transmembrane domain VAA_RS04760 PF04316 Anti-sigma-28 factor, FlgM VAA_RS04770 PF01584 CheW-like domain VAA_RS04770 PF00072 Response regulator receiver domain VAA_RS04775 PF03705 CheR methyltransferase, all-alpha domain VAA_RS04775 PF01739 CheR methyltransferase, SAM binding domain VAA_RS04780 PF00460 Flagella basal body rod protein VAA_RS04785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA_RS04785 PF00460 Flagella basal body rod protein VAA_RS04790 PF13861 FlgD Tudor-like domain VAA_RS04790 PF13860 FlgD Ig-like domain VAA_RS04790 PF03963 Flagellar hook capping protein - N-terminal region VAA_RS04800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA_RS04800 PF00460 Flagella basal body rod protein VAA_RS04805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA_RS04805 PF00460 Flagella basal body rod protein VAA_RS04810 PF02107 Flagellar L-ring protein VAA_RS04815 PF02119 Flagellar P-ring protein VAA_RS04820 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VAA_RS04820 PF10135 Rod binding protein VAA_RS04825 PF07196 Flagellin hook IN motif VAA_RS04825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA_RS04830 PF00669 Bacterial flagellin N-terminal helical region VAA_RS04835 PF07196 Flagellin hook IN motif VAA_RS04835 PF00669 Bacterial flagellin N-terminal helical region VAA_RS04835 PF00700 Bacterial flagellin C-terminal helical region VAA_RS04840 PF00700 Bacterial flagellin C-terminal helical region VAA_RS04840 PF07196 Flagellin hook IN motif VAA_RS04840 PF00669 Bacterial flagellin N-terminal helical region VAA_RS04915 PF01926 50S ribosome-binding GTPase VAA_RS04915 PF06071 Protein of unknown function (DUF933) VAA_RS04920 PF01195 Peptidyl-tRNA hydrolase VAA_RS04925 PF14572 Phosphoribosyl synthetase-associated domain VAA_RS04925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VAA_RS04935 PF03550 Outer membrane lipoprotein LolB VAA_RS04940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VAA_RS04940 PF01488 Shikimate / quinate 5-dehydrogenase VAA_RS04940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VAA_RS04945 PF00472 RF-1 domain VAA_RS04945 PF03462 PCRF domain VAA_RS04950 PF17827 PrmC N-terminal domain VAA_RS04950 PF13847 Methyltransferase domain VAA_RS04955 PF04247 Invasion gene expression up-regulator, SirB VAA_RS04960 PF13369 Transglutaminase-like superfamily VAA_RS04965 PF00793 DAHP synthetase I family VAA_RS04970 PF00149 Calcineurin-like phosphoesterase VAA_RS04970 PF02872 5'-nucleotidase, C-terminal domain VAA_RS04975 PF04073 Aminoacyl-tRNA editing domain VAA_RS04980 PF00860 Permease family VAA_RS04995 PF03358 NADPH-dependent FMN reductase VAA_RS05000 PF03960 ArsC family VAA_RS05005 PF13181 Tetratricopeptide repeat VAA_RS05005 PF01435 Peptidase family M48 VAA_RS05015 PF01594 AI-2E family transporter VAA_RS05020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS05020 PF00672 HAMP domain VAA_RS05020 PF02743 Cache domain VAA_RS05025 PF00578 AhpC/TSA family VAA_RS05035 PF00701 Dihydrodipicolinate synthetase family VAA_RS05040 PF06804 NlpB/DapX lipoprotein VAA_RS05055 PF07687 Peptidase dimerisation domain VAA_RS05055 PF01546 Peptidase family M20/M25/M40 VAA_RS05060 PF03960 ArsC family VAA_RS05080 PF11143 Protein of unknown function (DUF2919) VAA_RS05085 PF04261 Dyp-type peroxidase family VAA_RS05090 PF07196 Flagellin hook IN motif VAA_RS05090 PF00700 Bacterial flagellin C-terminal helical region VAA_RS05090 PF00669 Bacterial flagellin N-terminal helical region VAA_RS05095 PF07196 Flagellin hook IN motif VAA_RS05095 PF00669 Bacterial flagellin N-terminal helical region VAA_RS05095 PF00700 Bacterial flagellin C-terminal helical region VAA_RS05100 PF07196 Flagellin hook IN motif VAA_RS05100 PF00669 Bacterial flagellin N-terminal helical region VAA_RS05100 PF00700 Bacterial flagellin C-terminal helical region VAA_RS05105 PF03646 FlaG protein VAA_RS05110 PF07196 Flagellin hook IN motif VAA_RS05110 PF07195 Flagellar hook-associated protein 2 C-terminus VAA_RS05110 PF02465 Flagellar hook-associated protein 2 N-terminus VAA_RS05120 PF02561 Flagellar protein FliS VAA_RS05125 PF00158 Sigma-54 interaction domain VAA_RS05125 PF02954 Bacterial regulatory protein, Fis family VAA_RS05125 PF06490 Flagellar regulatory protein FleQ VAA_RS05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS05130 PF13188 PAS domain VAA_RS05130 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS05135 PF00158 Sigma-54 interaction domain VAA_RS05135 PF00072 Response regulator receiver domain VAA_RS05135 PF02954 Bacterial regulatory protein, Fis family VAA_RS05140 PF02049 Flagellar hook-basal body complex protein FliE VAA_RS05145 PF01514 Secretory protein of YscJ/FliF family VAA_RS05145 PF08345 Flagellar M-ring protein C-terminal VAA_RS05150 PF14842 FliG N-terminal domain VAA_RS05150 PF01706 FliG C-terminal domain VAA_RS05150 PF14841 FliG middle domain VAA_RS05160 PF18269 T3SS EscN ATPase C-terminal domain VAA_RS05160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAA_RS05180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAA_RS05180 PF02154 Flagellar motor switch protein FliM VAA_RS05185 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAA_RS05190 PF04347 Flagellar biosynthesis protein, FliO VAA_RS05195 PF00813 FliP family VAA_RS05200 PF01313 Bacterial export proteins, family 3 VAA_RS05205 PF01311 Bacterial export proteins, family 1 VAA_RS05210 PF01312 FlhB HrpN YscU SpaS Family VAA_RS05215 PF01713 Smr domain VAA_RS05220 PF05175 Methyltransferase small domain VAA_RS05225 PF01264 Chorismate synthase VAA_RS05230 PF03458 UPF0126 domain VAA_RS05235 PF04315 Elongation factor P hydroxylase VAA_RS05240 PF08891 YfcL protein VAA_RS05245 PF03358 NADPH-dependent FMN reductase VAA_RS05250 PF01266 FAD dependent oxidoreductase VAA_RS05250 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VAA_RS05255 PF00109 Beta-ketoacyl synthase, N-terminal domain VAA_RS05255 PF02801 Beta-ketoacyl synthase, C-terminal domain VAA_RS05260 PF11890 Domain of unknown function (DUF3410) VAA_RS05260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA_RS05260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA_RS05265 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAA_RS05265 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAA_RS05270 PF01475 Ferric uptake regulator family VAA_RS05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS05280 PF03466 LysR substrate binding domain VAA_RS05285 PF03788 LrgA family VAA_RS05290 PF04172 LrgB-like family VAA_RS05295 PF00258 Flavodoxin VAA_RS05305 PF12697 Alpha/beta hydrolase family VAA_RS05310 PF17206 SeqA protein N-terminal domain VAA_RS05310 PF03925 SeqA protein C-terminal domain VAA_RS05315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA_RS05315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA_RS05315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA_RS05315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA_RS05325 PF01784 NIF3 (NGG1p interacting factor 3) VAA_RS05330 PF00285 Citrate synthase, C-terminal domain VAA_RS05335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VAA_RS05340 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VAA_RS05345 PF02910 Fumarate reductase flavoprotein C-term VAA_RS05345 PF00890 FAD binding domain VAA_RS05350 PF13085 2Fe-2S iron-sulfur cluster binding domain VAA_RS05355 PF16870 2-oxoglutarate dehydrogenase C-terminal VAA_RS05355 PF02779 Transketolase, pyrimidine binding domain VAA_RS05355 PF16078 2-oxoglutarate dehydrogenase N-terminus VAA_RS05355 PF00676 Dehydrogenase E1 component VAA_RS05360 PF00364 Biotin-requiring enzyme VAA_RS05360 PF02817 e3 binding domain VAA_RS05360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAA_RS05365 PF00549 CoA-ligase VAA_RS05365 PF08442 ATP-grasp domain VAA_RS05370 PF00549 CoA-ligase VAA_RS05370 PF02629 CoA binding domain VAA_RS05375 PF00950 ABC 3 transport family VAA_RS05380 PF00005 ABC transporter VAA_RS05385 PF01297 Zinc-uptake complex component A periplasmic VAA_RS05390 PF02311 AraC-like ligand binding domain VAA_RS05390 PF12833 Helix-turn-helix domain VAA_RS05395 PF04023 FeoA domain VAA_RS05400 PF07664 Ferrous iron transport protein B C terminus VAA_RS05400 PF17910 FeoB cytosolic helical domain VAA_RS05400 PF02421 Ferrous iron transport protein B VAA_RS05400 PF07670 Nucleoside recognition VAA_RS05415 PF00750 tRNA synthetases class I (R) VAA_RS05415 PF03485 Arginyl tRNA synthetase N terminal domain VAA_RS05415 PF05746 DALR anticodon binding domain VAA_RS05420 PF06185 YecM protein VAA_RS05425 PF05193 Peptidase M16 inactive domain VAA_RS05425 PF00675 Insulinase (Peptidase family M16) VAA_RS05430 PF00300 Histidine phosphatase superfamily (branch 1) VAA_RS05435 PF00771 FHIPEP family VAA_RS05440 PF00448 SRP54-type protein, GTPase domain VAA_RS05445 PF10609 NUBPL iron-transfer P-loop NTPase VAA_RS05450 PF04542 Sigma-70 region 2 VAA_RS05450 PF04545 Sigma-70, region 4 VAA_RS05450 PF04539 Sigma-70 region 3 VAA_RS05455 PF00072 Response regulator receiver domain VAA_RS05460 PF04344 Chemotaxis phosphatase, CheZ VAA_RS05465 PF01584 CheW-like domain VAA_RS05465 PF02895 Signal transducing histidine kinase, homodimeric domain VAA_RS05465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS05465 PF00072 Response regulator receiver domain VAA_RS05465 PF01627 Hpt domain VAA_RS05470 PF00072 Response regulator receiver domain VAA_RS05470 PF01339 CheB methylesterase VAA_RS05475 PF13614 AAA domain VAA_RS05485 PF01584 CheW-like domain VAA_RS05495 PF00005 ABC transporter VAA_RS05500 PF03379 CcmB protein VAA_RS05505 PF01578 Cytochrome C assembly protein VAA_RS05515 PF03100 CcmE VAA_RS05520 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VAA_RS05520 PF01578 Cytochrome C assembly protein VAA_RS05525 PF08534 Redoxin VAA_RS05530 PF03918 Cytochrome C biogenesis protein VAA_RS05540 PF04333 MlaA lipoprotein VAA_RS05555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VAA_RS05555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VAA_RS05560 PF00462 Glutaredoxin VAA_RS05565 PF01751 Toprim domain VAA_RS05565 PF01131 DNA topoisomerase VAA_RS05580 PF02634 FdhD/NarQ family VAA_RS05585 PF00384 Molybdopterin oxidoreductase VAA_RS05595 PF11893 Domain of unknown function (DUF3413) VAA_RS05595 PF00884 Sulfatase VAA_RS05600 PF07208 Protein of unknown function (DUF1414) VAA_RS05605 PF04245 37-kD nucleoid-associated bacterial protein VAA_RS05615 PF03553 Na+/H+ antiporter family VAA_RS05620 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAA_RS05620 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAA_RS05625 PF01914 MarC family integral membrane protein VAA_RS05630 PF00465 Iron-containing alcohol dehydrogenase VAA_RS05630 PF00171 Aldehyde dehydrogenase family VAA_RS05640 PF12111 Polyribonucleotide phosphorylase C terminal VAA_RS05640 PF10150 Ribonuclease E/G family VAA_RS05640 PF00575 S1 RNA binding domain VAA_RS05645 PF00849 RNA pseudouridylate synthase VAA_RS05645 PF01479 S4 domain VAA_RS05650 PF02545 Maf-like protein VAA_RS05655 PF02620 Large ribosomal RNA subunit accumulation protein YceD VAA_RS05660 PF01783 Ribosomal L32p protein family VAA_RS05665 PF02504 Fatty acid synthesis protein VAA_RS05670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAA_RS05670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAA_RS05675 PF00698 Acyl transferase domain VAA_RS05685 PF00550 Phosphopantetheine attachment site VAA_RS05690 PF00109 Beta-ketoacyl synthase, N-terminal domain VAA_RS05690 PF02801 Beta-ketoacyl synthase, C-terminal domain VAA_RS05695 PF01063 Amino-transferase class IV VAA_RS05700 PF02618 YceG-like family VAA_RS05705 PF02223 Thymidylate kinase VAA_RS05710 PF09115 DNA polymerase III, delta subunit, C terminal VAA_RS05715 PF01026 TatD related DNase VAA_RS05720 PF02378 Phosphotransferase system, EIIC VAA_RS05720 PF00367 phosphotransferase system, EIIB VAA_RS05725 PF00209 Sodium:neurotransmitter symporter family VAA_RS05740 PF01734 Patatin-like phospholipase VAA_RS05745 PF02887 Pyruvate kinase, alpha/beta domain VAA_RS05745 PF00224 Pyruvate kinase, barrel domain VAA_RS05750 PF00480 ROK family VAA_RS05755 PF01584 CheW-like domain VAA_RS05755 PF00072 Response regulator receiver domain VAA_RS05760 PF00106 short chain dehydrogenase VAA_RS05765 PF01343 Peptidase family S49 VAA_RS05765 PF08496 Peptidase family S49 N-terminal VAA_RS05780 PF01966 HD domain VAA_RS05780 PF13286 Phosphohydrolase-associated domain VAA_RS05790 PF00155 Aminotransferase class I and II VAA_RS05795 PF00425 chorismate binding enzyme VAA_RS05800 PF16582 Middle domain of thiamine pyrophosphate VAA_RS05800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA_RS05800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA_RS05805 PF12697 Alpha/beta hydrolase family VAA_RS05810 PF00378 Enoyl-CoA hydratase/isomerase VAA_RS05815 PF13378 Enolase C-terminal domain-like VAA_RS05820 PF13193 AMP-binding enzyme C-terminal domain VAA_RS05820 PF00501 AMP-binding enzyme VAA_RS05840 PF07690 Major Facilitator Superfamily VAA_RS05855 PF00291 Pyridoxal-phosphate dependent enzyme VAA_RS05860 PF13404 AsnC-type helix-turn-helix domain VAA_RS05860 PF01037 Lrp/AsnC ligand binding domain VAA_RS05870 PF09619 Type III secretion system lipoprotein chaperone (YscW) VAA_RS05875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VAA_RS05885 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS05890 PF03466 LysR substrate binding domain VAA_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS05905 PF00501 AMP-binding enzyme VAA_RS05915 PF00106 short chain dehydrogenase VAA_RS05925 PF00072 Response regulator receiver domain VAA_RS05925 PF00486 Transcriptional regulatory protein, C terminal VAA_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS05930 PF08521 Two-component sensor kinase N-terminal VAA_RS05930 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS05935 PF00884 Sulfatase VAA_RS05935 PF08019 Phosphoethanolamine transferase EptA/EptB VAA_RS05940 PF01037 Lrp/AsnC ligand binding domain VAA_RS05945 PF01810 LysE type translocator VAA_RS05950 PF06826 Predicted Permease Membrane Region VAA_RS05950 PF02080 TrkA-C domain VAA_RS05955 PF00486 Transcriptional regulatory protein, C terminal VAA_RS05955 PF00072 Response regulator receiver domain VAA_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS05960 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS05960 PF00672 HAMP domain VAA_RS05975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAA_RS05975 PF00356 Bacterial regulatory proteins, lacI family VAA_RS05980 PF00920 Dehydratase family VAA_RS05985 PF01202 Shikimate kinase VAA_RS05990 PF02447 GntP family permease VAA_RS05995 PF01081 KDPG and KHG aldolase VAA_RS06010 PF06629 MltA-interacting protein MipA VAA_RS06015 PF00109 Beta-ketoacyl synthase, N-terminal domain VAA_RS06015 PF02801 Beta-ketoacyl synthase, C-terminal domain VAA_RS06025 PF07977 FabA-like domain VAA_RS06030 PF02801 Beta-ketoacyl synthase, C-terminal domain VAA_RS06030 PF00109 Beta-ketoacyl synthase, N-terminal domain VAA_RS06055 PF00221 Aromatic amino acid lyase VAA_RS06060 PF00535 Glycosyl transferase family 2 VAA_RS06070 PF00501 AMP-binding enzyme VAA_RS06070 PF13193 AMP-binding enzyme C-terminal domain VAA_RS06080 PF00550 Phosphopantetheine attachment site VAA_RS06085 PF00550 Phosphopantetheine attachment site VAA_RS06105 PF04820 Tryptophan halogenase VAA_RS06110 PF09308 LuxQ, periplasmic VAA_RS06110 PF00072 Response regulator receiver domain VAA_RS06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS06110 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS06115 PF03707 Bacterial signalling protein N terminal repeat VAA_RS06115 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS06115 PF00563 EAL domain VAA_RS06120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA_RS06125 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS06130 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA_RS06130 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS06135 PF00005 ABC transporter VAA_RS06135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA_RS06140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA_RS06140 PF00005 ABC transporter VAA_RS06145 PF13409 Glutathione S-transferase, N-terminal domain VAA_RS06150 PF01515 Phosphate acetyl/butaryl transferase VAA_RS06150 PF07085 DRTGG domain VAA_RS06155 PF00871 Acetokinase family VAA_RS06160 PF04217 Protein of unknown function, DUF412 VAA_RS06170 PF02653 Branched-chain amino acid transport system / permease component VAA_RS06175 PF00005 ABC transporter VAA_RS06180 PF01207 Dihydrouridine synthase (Dus) VAA_RS06185 PF02810 SEC-C motif VAA_RS06185 PF07517 SecA DEAD-like domain VAA_RS06185 PF01043 SecA preprotein cross-linking domain VAA_RS06185 PF07516 SecA Wing and Scaffold domain VAA_RS06190 PF03548 Outer membrane lipoprotein carrier protein LolA VAA_RS06195 PF16193 AAA C-terminal domain VAA_RS06195 PF00004 ATPase family associated with various cellular activities (AAA) VAA_RS06195 PF12002 MgsA AAA+ ATPase C terminal VAA_RS06200 PF02403 Seryl-tRNA synthetase N-terminal domain VAA_RS06200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAA_RS06205 PF00202 Aminotransferase class-III VAA_RS06210 PF06968 Biotin and Thiamin Synthesis associated domain VAA_RS06210 PF04055 Radical SAM superfamily VAA_RS06215 PF00155 Aminotransferase class I and II VAA_RS06220 PF08241 Methyltransferase domain VAA_RS06230 PF02600 Disulfide bond formation protein DsbB VAA_RS06235 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VAA_RS06240 PF00392 Bacterial regulatory proteins, gntR family VAA_RS06240 PF07840 FadR C-terminal domain VAA_RS06250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS06250 PF00672 HAMP domain VAA_RS06255 PF01230 HIT domain VAA_RS06270 PF13036 Peptidoglycan-synthase activator LpoB VAA_RS06270 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VAA_RS06280 PF05728 Uncharacterised protein family (UPF0227) VAA_RS06285 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS06290 PF07968 Leukocidin/Hemolysin toxin family VAA_RS06290 PF16458 Beta-prism lectin VAA_RS06290 PF12563 Hemolytic toxin N terminal VAA_RS06300 PF03461 TRCF domain VAA_RS06300 PF02559 CarD-like/TRCF domain VAA_RS06300 PF00271 Helicase conserved C-terminal domain VAA_RS06300 PF17757 UvrB interaction domain VAA_RS06300 PF00270 DEAD/DEAH box helicase VAA_RS06310 PF12704 MacB-like periplasmic core domain VAA_RS06310 PF02687 FtsX-like permease family VAA_RS06315 PF00005 ABC transporter VAA_RS06320 PF12704 MacB-like periplasmic core domain VAA_RS06320 PF02687 FtsX-like permease family VAA_RS06330 PF13567 Domain of unknown function (DUF4131) VAA_RS06330 PF00753 Metallo-beta-lactamase superfamily VAA_RS06330 PF03772 Competence protein VAA_RS06335 PF00664 ABC transporter transmembrane region VAA_RS06335 PF00005 ABC transporter VAA_RS06340 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VAA_RS06345 PF03966 Trm112p-like protein VAA_RS06350 PF02348 Cytidylyltransferase VAA_RS06360 PF04293 SpoVR like protein VAA_RS06365 PF04285 Protein of unknown function (DUF444) VAA_RS06370 PF08298 PrkA AAA domain VAA_RS06370 PF06798 PrkA serine protein kinase C-terminal domain VAA_RS06375 PF03887 YfbU domain VAA_RS06385 PF04055 Radical SAM superfamily VAA_RS06390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS06390 PF00672 HAMP domain VAA_RS06400 PF02901 Pyruvate formate lyase-like VAA_RS06400 PF01228 Glycine radical VAA_RS06415 PF00005 ABC transporter VAA_RS06420 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS06435 PF03372 Endonuclease/Exonuclease/phosphatase family VAA_RS06440 PF00672 HAMP domain VAA_RS06440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS06445 PF10689 Protein of unknown function (DUF2496) VAA_RS06450 PF07445 Primosomal replication protein priC VAA_RS06455 PF01925 Sulfite exporter TauE/SafE VAA_RS06460 PF13307 Helicase C-terminal domain VAA_RS06460 PF06733 DEAD_2 VAA_RS06470 PF02810 SEC-C motif VAA_RS06475 PF00563 EAL domain VAA_RS06475 PF08668 HDOD domain VAA_RS06485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAA_RS06490 PF01406 tRNA synthetases class I (C) catalytic domain VAA_RS06490 PF09190 DALR domain VAA_RS06495 PF02075 Crossover junction endodeoxyribonuclease RuvC VAA_RS06500 PF07499 RuvA, C-terminal domain VAA_RS06500 PF01330 RuvA N terminal domain VAA_RS06505 PF17864 RuvB AAA lid domain VAA_RS06505 PF05491 RuvB C-terminal winged helix domain VAA_RS06505 PF05496 Holliday junction DNA helicase RuvB P-loop domain VAA_RS06510 PF01654 Cytochrome bd terminal oxidase subunit I VAA_RS06515 PF02322 Cytochrome bd terminal oxidase subunit II VAA_RS06525 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) VAA_RS06530 PF03061 Thioesterase superfamily VAA_RS06535 PF01618 MotA/TolQ/ExbB proton channel family VAA_RS06540 PF02472 Biopolymer transport protein ExbD/TolR VAA_RS06550 PF04052 TolB amino-terminal domain VAA_RS06550 PF07676 WD40-like Beta Propeller Repeat VAA_RS06555 PF00691 OmpA family VAA_RS06560 PF16331 TolA binding protein trimerisation VAA_RS06560 PF13525 Outer membrane lipoprotein VAA_RS06565 PF02445 Quinolinate synthetase A protein VAA_RS06570 PF13007 Transposase C of IS166 homeodomain VAA_RS06570 PF13817 IS66 C-terminal element VAA_RS06570 PF03050 Transposase IS66 family VAA_RS06570 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS06590 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS06590 PF09308 LuxQ, periplasmic VAA_RS06590 PF00072 Response regulator receiver domain VAA_RS06595 PF06610 L-alanine exporter VAA_RS06605 PF00589 Phage integrase family VAA_RS06605 PF13356 Arm DNA-binding domain VAA_RS06615 PF13737 Transposase DDE domain VAA_RS06620 PF07728 AAA domain (dynein-related subfamily) VAA_RS06620 PF12102 Domain of unknown function (DUF3578) VAA_RS06630 PF01966 HD domain VAA_RS06630 PF13286 Phosphohydrolase-associated domain VAA_RS06640 PF13188 PAS domain VAA_RS06640 PF03707 Bacterial signalling protein N terminal repeat VAA_RS06640 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS06640 PF00563 EAL domain VAA_RS06645 PF00171 Aldehyde dehydrogenase family VAA_RS06660 PF00440 Bacterial regulatory proteins, tetR family VAA_RS06660 PF16295 Tetracyclin repressor-like, C-terminal domain VAA_RS06665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAA_RS06665 PF02770 Acyl-CoA dehydrogenase, middle domain VAA_RS06665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAA_RS06665 PF09317 Domain of unknown function (DUF1974) VAA_RS06670 PF07055 Enoyl reductase FAD binding domain VAA_RS06670 PF12241 Trans-2-enoyl-CoA reductase catalytic region VAA_RS06670 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VAA_RS06700 PF01565 FAD binding domain VAA_RS06700 PF02913 FAD linked oxidases, C-terminal domain VAA_RS06700 PF13183 4Fe-4S dicluster domain VAA_RS06705 PF04191 Phospholipid methyltransferase VAA_RS06715 PF00221 Aromatic amino acid lyase VAA_RS06720 PF17391 Urocanase N-terminal domain VAA_RS06720 PF17392 Urocanase C-terminal domain VAA_RS06720 PF01175 Urocanase Rossmann-like domain VAA_RS06725 PF00491 Arginase family VAA_RS06730 PF01979 Amidohydrolase family VAA_RS06735 PF00392 Bacterial regulatory proteins, gntR family VAA_RS06735 PF07702 UTRA domain VAA_RS06745 PF04269 Protein of unknown function, DUF440 VAA_RS06750 PF01132 Elongation factor P (EF-P) OB domain VAA_RS06750 PF08207 Elongation factor P (EF-P) KOW-like domain VAA_RS06750 PF09285 Elongation factor P, C-terminal VAA_RS06760 PF03104 DNA polymerase family B, exonuclease domain VAA_RS06760 PF00136 DNA polymerase family B VAA_RS06765 PF00196 Bacterial regulatory proteins, luxR family VAA_RS06765 PF00072 Response regulator receiver domain VAA_RS06770 PF01541 GIY-YIG catalytic domain VAA_RS06770 PF02151 UvrB/uvrC motif VAA_RS06770 PF08459 UvrC Helix-hairpin-helix N-terminal VAA_RS06775 PF01066 CDP-alcohol phosphatidyltransferase VAA_RS06815 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VAA_RS06815 PF03147 Ferredoxin-fold anticodon binding domain VAA_RS06815 PF03484 tRNA synthetase B5 domain VAA_RS06815 PF01588 Putative tRNA binding domain VAA_RS06815 PF03483 B3/4 domain VAA_RS06820 PF00216 Bacterial DNA-binding protein VAA_RS06825 PF05488 PAAR motif VAA_RS06830 PF05724 Thiopurine S-methyltransferase (TPMT) VAA_RS06835 PF08447 PAS fold VAA_RS06835 PF13426 PAS domain VAA_RS06835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS06840 PF02222 ATP-grasp domain VAA_RS06845 PF08447 PAS fold VAA_RS06845 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS06845 PF00563 EAL domain VAA_RS06845 PF08448 PAS fold VAA_RS06850 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VAA_RS06850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAA_RS06855 PF04172 LrgB-like family VAA_RS06860 PF03788 LrgA family VAA_RS06865 PF00929 Exonuclease VAA_RS06865 PF08411 Exonuclease C-terminal VAA_RS06870 PF00375 Sodium:dicarboxylate symporter family VAA_RS06875 PF13460 NAD(P)H-binding VAA_RS06880 PF02743 Cache domain VAA_RS06880 PF00672 HAMP domain VAA_RS06880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS06885 PF00664 ABC transporter transmembrane region VAA_RS06885 PF03412 Peptidase C39 family VAA_RS06885 PF00005 ABC transporter VAA_RS06895 PF03412 Peptidase C39 family VAA_RS06895 PF00664 ABC transporter transmembrane region VAA_RS06895 PF00005 ABC transporter VAA_RS06905 PF02794 RTX toxin acyltransferase family VAA_RS06910 PF07634 RtxA repeat VAA_RS06910 PF11713 Peptidase C80 family VAA_RS06910 PF16671 Actin cross-linking domain VAA_RS06910 PF12146 Serine aminopeptidase, S33 VAA_RS06910 PF11647 Membrane Localization Domain VAA_RS06915 PF02277 Phosphoribosyltransferase VAA_RS06920 PF02654 Cobalamin-5-phosphate synthase VAA_RS06925 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VAA_RS06935 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VAA_RS06940 PF01032 FecCD transport family VAA_RS06945 PF00005 ABC transporter VAA_RS06965 PF03466 LysR substrate binding domain VAA_RS06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS06975 PF01863 Protein of unknown function DUF45 VAA_RS06980 PF05971 RNA methyltransferase VAA_RS06995 PF04204 Homoserine O-succinyltransferase VAA_RS07030 PF17203 Single cache domain 3 VAA_RS07030 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VAA_RS07030 PF00989 PAS fold VAA_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS07035 PF12431 Transcriptional regulator VAA_RS07035 PF00072 Response regulator receiver domain VAA_RS07045 PF01584 CheW-like domain VAA_RS07045 PF00072 Response regulator receiver domain VAA_RS07050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAA_RS07050 PF11852 Domain of unknown function (DUF3372) VAA_RS07050 PF03714 Bacterial pullanase-associated domain VAA_RS07050 PF18494 Pullulanase Ins domain VAA_RS07050 PF17967 Pullulanase N2 domain VAA_RS07060 PF00072 Response regulator receiver domain VAA_RS07060 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS07085 PF00589 Phage integrase family VAA_RS07085 PF02899 Phage integrase, N-terminal SAM-like domain VAA_RS07110 PF04717 Type VI secretion system, phage-baseplate injector VAA_RS07110 PF06715 Gp5 C-terminal repeat (3 copies) VAA_RS07130 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAA_RS07155 PF07724 AAA domain (Cdc48 subfamily) VAA_RS07155 PF00004 ATPase family associated with various cellular activities (AAA) VAA_RS07155 PF17871 AAA lid domain VAA_RS07155 PF10431 C-terminal, D2-small domain, of ClpB protein VAA_RS07160 PF07478 D-ala D-ala ligase C-terminus VAA_RS07180 PF16697 Inner membrane component of T3SS, cytoplasmic domain VAA_RS07190 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VAA_RS07205 PF00069 Protein kinase domain VAA_RS07205 PF08239 Bacterial SH3 domain VAA_RS07220 PF00665 Integrase core domain VAA_RS07235 PF00486 Transcriptional regulatory protein, C terminal VAA_RS07245 PF00072 Response regulator receiver domain VAA_RS07245 PF12833 Helix-turn-helix domain VAA_RS07250 PF13333 Integrase core domain VAA_RS07250 PF00665 Integrase core domain VAA_RS07250 PF13276 HTH-like domain VAA_RS07255 PF13007 Transposase C of IS166 homeodomain VAA_RS07255 PF13817 IS66 C-terminal element VAA_RS07255 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS07255 PF03050 Transposase IS66 family VAA_RS07275 PF01042 Endoribonuclease L-PSP VAA_RS07280 PF02322 Cytochrome bd terminal oxidase subunit II VAA_RS07285 PF01654 Cytochrome bd terminal oxidase subunit I VAA_RS07300 PF05114 Protein of unknown function (DUF692) VAA_RS07325 PF12729 Four helix bundle sensory module for signal transduction VAA_RS07325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS07325 PF00672 HAMP domain VAA_RS07335 PF07885 Ion channel VAA_RS07340 PF12792 CSS motif domain associated with EAL VAA_RS07340 PF00563 EAL domain VAA_RS07350 PF02378 Phosphotransferase system, EIIC VAA_RS07350 PF00367 phosphotransferase system, EIIB VAA_RS07355 PF00356 Bacterial regulatory proteins, lacI family VAA_RS07360 PF08244 Glycosyl hydrolases family 32 C terminal VAA_RS07360 PF00251 Glycosyl hydrolases family 32 N-terminal domain VAA_RS07365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS07365 PF00672 HAMP domain VAA_RS07375 PF17773 UPF0176 acylphosphatase like domain VAA_RS07375 PF00581 Rhodanese-like domain VAA_RS07380 PF00005 ABC transporter VAA_RS07385 PF01032 FecCD transport family VAA_RS07395 PF02472 Biopolymer transport protein ExbD/TolR VAA_RS07400 PF01618 MotA/TolQ/ExbB proton channel family VAA_RS07405 PF03544 Gram-negative bacterial TonB protein C-terminal VAA_RS07410 PF06228 Haem utilisation ChuX/HutX VAA_RS07415 PF01243 Pyridoxamine 5'-phosphate oxidase VAA_RS07420 PF00593 TonB dependent receptor VAA_RS07420 PF04886 PT repeat VAA_RS07420 PF07715 TonB-dependent Receptor Plug Domain VAA_RS07425 PF00480 ROK family VAA_RS07430 PF00925 GTP cyclohydrolase II VAA_RS07455 PF03734 L,D-transpeptidase catalytic domain VAA_RS07455 PF01471 Putative peptidoglycan binding domain VAA_RS07460 PF05951 Bacterial protein of unknown function (DUF882) VAA_RS07465 PF00753 Metallo-beta-lactamase superfamily VAA_RS07480 PF01047 MarR family VAA_RS07485 PF02028 BCCT, betaine/carnitine/choline family transporter VAA_RS07490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS07490 PF02743 Cache domain VAA_RS07490 PF00672 HAMP domain VAA_RS07495 PF14480 DNA polymerase III polC-type N-terminus I VAA_RS07495 PF11490 DNA polymerase III polC-type N-terminus II VAA_RS07495 PF07733 Bacterial DNA polymerase III alpha NTPase domain VAA_RS07495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VAA_RS07495 PF14579 Helix-hairpin-helix motif VAA_RS07495 PF02811 PHP domain VAA_RS07495 PF00929 Exonuclease VAA_RS07500 PF00571 CBS domain VAA_RS07505 PF00155 Aminotransferase class I and II VAA_RS07510 PF00672 HAMP domain VAA_RS07510 PF01966 HD domain VAA_RS07515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS07515 PF12729 Four helix bundle sensory module for signal transduction VAA_RS07515 PF00672 HAMP domain VAA_RS07520 PF00072 Response regulator receiver domain VAA_RS07530 PF02895 Signal transducing histidine kinase, homodimeric domain VAA_RS07530 PF01584 CheW-like domain VAA_RS07530 PF01627 Hpt domain VAA_RS07530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS07530 PF09078 CheY binding VAA_RS07535 PF12729 Four helix bundle sensory module for signal transduction VAA_RS07535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS07535 PF00672 HAMP domain VAA_RS07540 PF01584 CheW-like domain VAA_RS07545 PF03705 CheR methyltransferase, all-alpha domain VAA_RS07545 PF01739 CheR methyltransferase, SAM binding domain VAA_RS07550 PF03975 CheD chemotactic sensory transduction VAA_RS07555 PF00072 Response regulator receiver domain VAA_RS07555 PF01339 CheB methylesterase VAA_RS07565 PF00152 tRNA synthetases class II (D, K and N) VAA_RS07565 PF01336 OB-fold nucleic acid binding domain VAA_RS07570 PF00672 HAMP domain VAA_RS07570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS07570 PF17200 Single Cache domain 2 VAA_RS07575 PF01242 6-pyruvoyl tetrahydropterin synthase VAA_RS07580 PF04231 Endonuclease I VAA_RS07585 PF00041 Fibronectin type III domain VAA_RS07585 PF12561 ToxR activated gene A lipoprotein domain VAA_RS07590 PF03315 Serine dehydratase beta chain VAA_RS07590 PF03313 Serine dehydratase alpha chain VAA_RS07595 PF03222 Tryptophan/tyrosine permease family VAA_RS07600 PF00293 NUDIX domain VAA_RS07605 PF04715 Anthranilate synthase component I, N terminal region VAA_RS07605 PF00425 chorismate binding enzyme VAA_RS07615 PF04317 YcjX-like family, DUF463 VAA_RS07620 PF05128 Domain of unknown function (DUF697) VAA_RS07625 PF00158 Sigma-54 interaction domain VAA_RS07625 PF18024 Helix-turn-helix domain VAA_RS07630 PF13302 Acetyltransferase (GNAT) domain VAA_RS07640 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS07645 PF00892 EamA-like transporter family VAA_RS07650 PF01168 Alanine racemase, N-terminal domain VAA_RS07650 PF00842 Alanine racemase, C-terminal domain VAA_RS07655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS07655 PF00672 HAMP domain VAA_RS07660 PF00939 Sodium:sulfate symporter transmembrane region VAA_RS07665 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS07665 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA_RS07670 PF02954 Bacterial regulatory protein, Fis family VAA_RS07670 PF00072 Response regulator receiver domain VAA_RS07670 PF00158 Sigma-54 interaction domain VAA_RS07675 PF00313 'Cold-shock' DNA-binding domain VAA_RS07680 PF03264 NapC/NirT cytochrome c family, N-terminal region VAA_RS07690 PF00270 DEAD/DEAH box helicase VAA_RS07690 PF00271 Helicase conserved C-terminal domain VAA_RS07695 PF00232 Glycosyl hydrolase family 1 VAA_RS07700 PF00356 Bacterial regulatory proteins, lacI family VAA_RS07725 PF00465 Iron-containing alcohol dehydrogenase VAA_RS07730 PF00012 Hsp70 protein VAA_RS07735 PF00012 Hsp70 protein VAA_RS07745 PF00563 EAL domain VAA_RS07745 PF08448 PAS fold VAA_RS07745 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS07765 PF04408 Helicase associated domain (HA2) VAA_RS07765 PF00270 DEAD/DEAH box helicase VAA_RS07765 PF11898 Domain of unknown function (DUF3418) VAA_RS07765 PF00271 Helicase conserved C-terminal domain VAA_RS07765 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VAA_RS07775 PF03466 LysR substrate binding domain VAA_RS07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS07780 PF07690 Major Facilitator Superfamily VAA_RS07795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAA_RS07795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAA_RS07800 PF00474 Sodium:solute symporter family VAA_RS07805 PF00571 CBS domain VAA_RS07805 PF01380 SIS domain VAA_RS07810 PF02811 PHP domain VAA_RS07810 PF14579 Helix-hairpin-helix motif VAA_RS07810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VAA_RS07810 PF07733 Bacterial DNA polymerase III alpha NTPase domain VAA_RS07810 PF00929 Exonuclease VAA_RS07820 PF04962 KduI/IolB family VAA_RS07825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA_RS07825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA_RS07825 PF00205 Thiamine pyrophosphate enzyme, central domain VAA_RS07830 PF00294 pfkB family carbohydrate kinase VAA_RS07835 PF01261 Xylose isomerase-like TIM barrel VAA_RS07845 PF00171 Aldehyde dehydrogenase family VAA_RS07855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAA_RS07855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAA_RS07860 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VAA_RS07875 PF13737 Transposase DDE domain VAA_RS07900 PF00271 Helicase conserved C-terminal domain VAA_RS07920 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS07920 PF03050 Transposase IS66 family VAA_RS07920 PF13817 IS66 C-terminal element VAA_RS07920 PF13007 Transposase C of IS166 homeodomain VAA_RS07930 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VAA_RS07935 PF01810 LysE type translocator VAA_RS07940 PF01235 Sodium:alanine symporter family VAA_RS07955 PF07687 Peptidase dimerisation domain VAA_RS07955 PF01546 Peptidase family M20/M25/M40 VAA_RS07960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAA_RS07965 PF04209 homogentisate 1,2-dioxygenase VAA_RS07975 PF14497 Glutathione S-transferase, C-terminal domain VAA_RS07975 PF02798 Glutathione S-transferase, N-terminal domain VAA_RS07980 PF04389 Peptidase family M28 VAA_RS07980 PF04151 Bacterial pre-peptidase C-terminal domain VAA_RS08005 PF01618 MotA/TolQ/ExbB proton channel family VAA_RS08010 PF01618 MotA/TolQ/ExbB proton channel family VAA_RS08015 PF02472 Biopolymer transport protein ExbD/TolR VAA_RS08030 PF01734 Patatin-like phospholipase VAA_RS08035 PF01068 ATP dependent DNA ligase domain VAA_RS08035 PF14743 DNA ligase OB-like domain VAA_RS08040 PF01554 MatE VAA_RS08050 PF03881 Fructosamine kinase VAA_RS08060 PF00877 NlpC/P60 family VAA_RS08065 PF12729 Four helix bundle sensory module for signal transduction VAA_RS08065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS08065 PF00672 HAMP domain VAA_RS08075 PF03942 DTW domain VAA_RS08080 PF00480 ROK family VAA_RS08090 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VAA_RS08095 PF12804 MobA-like NTP transferase domain VAA_RS08100 PF00005 ABC transporter VAA_RS08100 PF08402 TOBE domain VAA_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS08115 PF07690 Major Facilitator Superfamily VAA_RS08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS08120 PF07730 Histidine kinase VAA_RS08120 PF05231 MASE1 VAA_RS08125 PF00196 Bacterial regulatory proteins, luxR family VAA_RS08125 PF00072 Response regulator receiver domain VAA_RS08130 PF12848 ABC transporter VAA_RS08130 PF00005 ABC transporter VAA_RS08135 PF00909 Ammonium Transporter Family VAA_RS08140 PF02146 Sir2 family VAA_RS08145 PF13416 Bacterial extracellular solute-binding protein VAA_RS08150 PF13416 Bacterial extracellular solute-binding protein VAA_RS08155 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS08160 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS08165 PF00005 ABC transporter VAA_RS08165 PF08402 TOBE domain VAA_RS08185 PF01171 PP-loop family VAA_RS08190 PF00582 Universal stress protein family VAA_RS08195 PF13545 Crp-like helix-turn-helix domain VAA_RS08195 PF00027 Cyclic nucleotide-binding domain VAA_RS08210 PF00403 Heavy-metal-associated domain VAA_RS08220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAA_RS08220 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VAA_RS08235 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAA_RS08260 PF17414 MatP C-terminal ribbon-helix-helix domain VAA_RS08260 PF06303 MatP N-terminal domain VAA_RS08265 PF13654 AAA domain VAA_RS08265 PF05362 Lon protease (S16) C-terminal proteolytic domain VAA_RS08270 PF07977 FabA-like domain VAA_RS08275 PF04957 Ribosome modulation factor VAA_RS08285 PF00005 ABC transporter VAA_RS08285 PF12848 ABC transporter VAA_RS08285 PF16326 ABC transporter C-terminal domain VAA_RS08295 PF01170 Putative RNA methylase family UPF0020 VAA_RS08295 PF02926 THUMP domain VAA_RS08295 PF10672 S-adenosylmethionine-dependent methyltransferase VAA_RS08300 PF07126 Cell-division protein ZapC VAA_RS08305 PF01180 Dihydroorotate dehydrogenase VAA_RS08320 PF01433 Peptidase family M1 domain VAA_RS08320 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VAA_RS08320 PF11940 Domain of unknown function (DUF3458) Ig-like fold VAA_RS08330 PF11818 C-terminal domain of tail specific protease (DUF3340) VAA_RS08330 PF00595 PDZ domain VAA_RS08330 PF03572 Peptidase family S41 VAA_RS08330 PF17804 Tail specific protease N-terminal domain VAA_RS08335 PF17516 ProQ C-terminal domain VAA_RS08335 PF04352 ProQ/FINO family VAA_RS08340 PF13185 GAF domain VAA_RS08345 PF00664 ABC transporter transmembrane region VAA_RS08345 PF00005 ABC transporter VAA_RS08350 PF04403 Paraquat-inducible protein A VAA_RS08360 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VAA_RS08360 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VAA_RS08360 PF01189 16S rRNA methyltransferase RsmB/F VAA_RS08365 PF17783 CvfB-like winged helix domain VAA_RS08365 PF13509 S1 domain VAA_RS08380 PF00391 PEP-utilising enzyme, mobile domain VAA_RS08380 PF02896 PEP-utilising enzyme, TIM barrel domain VAA_RS08380 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VAA_RS08385 PF00793 DAHP synthetase I family VAA_RS08390 PF04461 Protein of unknown function (DUF520) VAA_RS08400 PF10414 Sirohaem synthase dimerisation region VAA_RS08400 PF14824 Sirohaem biosynthesis protein central VAA_RS08400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAA_RS08405 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA_RS08410 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS08415 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS08420 PF00005 ABC transporter VAA_RS08425 PF01027 Inhibitor of apoptosis-promoting Bax1 VAA_RS08430 PF04358 DsrC like protein VAA_RS08435 PF00708 Acylphosphatase VAA_RS08440 PF10672 S-adenosylmethionine-dependent methyltransferase VAA_RS08440 PF17785 PUA-like domain VAA_RS08445 PF04986 Putative transposase VAA_RS08445 PF14319 Transposase zinc-binding domain VAA_RS08450 PF17785 PUA-like domain VAA_RS08450 PF10672 S-adenosylmethionine-dependent methyltransferase VAA_RS08475 PF06508 Queuosine biosynthesis protein QueC VAA_RS08480 PF04055 Radical SAM superfamily VAA_RS08500 PF00501 AMP-binding enzyme VAA_RS08500 PF13193 AMP-binding enzyme C-terminal domain VAA_RS08500 PF16177 Acetyl-coenzyme A synthetase N-terminus VAA_RS08505 PF04303 PrpF protein VAA_RS08510 PF00330 Aconitase family (aconitate hydratase) VAA_RS08510 PF00694 Aconitase C-terminal domain VAA_RS08515 PF00285 Citrate synthase, C-terminal domain VAA_RS08550 PF00072 Response regulator receiver domain VAA_RS08550 PF00486 Transcriptional regulatory protein, C terminal VAA_RS08555 PF00672 HAMP domain VAA_RS08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS08555 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS08560 PF01219 Prokaryotic diacylglycerol kinase VAA_RS08565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAA_RS08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS08570 PF03466 LysR substrate binding domain VAA_RS08575 PF02653 Branched-chain amino acid transport system / permease component VAA_RS08580 PF00005 ABC transporter VAA_RS08585 PF13407 Periplasmic binding protein domain VAA_RS08600 PF02001 Protein of unknown function DUF134 VAA_RS08610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA_RS08620 PF12833 Helix-turn-helix domain VAA_RS08625 PF02378 Phosphotransferase system, EIIC VAA_RS08625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA_RS08625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA_RS08630 PF01238 Phosphomannose isomerase type I VAA_RS08650 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VAA_RS08655 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VAA_RS08660 PF04223 Citrate lyase, alpha subunit (CitF) VAA_RS08665 PF03328 HpcH/HpaI aldolase/citrate lyase family VAA_RS08670 PF06857 Malonate decarboxylase delta subunit (MdcD) VAA_RS08675 PF00072 Response regulator receiver domain VAA_RS08675 PF12431 Transcriptional regulator VAA_RS08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS08680 PF17203 Single cache domain 3 VAA_RS08685 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VAA_RS08690 PF00364 Biotin-requiring enzyme VAA_RS08690 PF00682 HMGL-like VAA_RS08690 PF02436 Conserved carboxylase domain VAA_RS08700 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VAA_RS08705 PF08218 Citrate lyase ligase C-terminal domain VAA_RS08710 PF01970 Tripartite tricarboxylate transporter TctA family VAA_RS08725 PF12729 Four helix bundle sensory module for signal transduction VAA_RS08725 PF00672 HAMP domain VAA_RS08725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS08730 PF13737 Transposase DDE domain VAA_RS08735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS08735 PF12729 Four helix bundle sensory module for signal transduction VAA_RS08735 PF00672 HAMP domain VAA_RS08740 PF03989 DNA gyrase C-terminal domain, beta-propeller VAA_RS08740 PF00521 DNA gyrase/topoisomerase IV, subunit A VAA_RS08755 PF00268 Ribonucleotide reductase, small chain VAA_RS08760 PF00175 Oxidoreductase NAD-binding domain VAA_RS08760 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA_RS08760 PF00970 Oxidoreductase FAD-binding domain VAA_RS08770 PF00994 Probable molybdopterin binding domain VAA_RS08785 PF00672 HAMP domain VAA_RS08785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS08785 PF17200 Single Cache domain 2 VAA_RS08795 PF16653 Saccharopine dehydrogenase C-terminal domain VAA_RS08795 PF03435 Saccharopine dehydrogenase NADP binding domain VAA_RS08800 PF00202 Aminotransferase class-III VAA_RS08810 PF06965 Na+/H+ antiporter 1 VAA_RS08825 PF00005 ABC transporter VAA_RS08830 PF01554 MatE VAA_RS08835 PF13460 NAD(P)H-binding VAA_RS08835 PF11066 Protein of unknown function (DUF2867) VAA_RS08845 PF07690 Major Facilitator Superfamily VAA_RS08850 PF00849 RNA pseudouridylate synthase VAA_RS08850 PF01479 S4 domain VAA_RS08855 PF00271 Helicase conserved C-terminal domain VAA_RS08855 PF04851 Type III restriction enzyme, res subunit VAA_RS08865 PF00486 Transcriptional regulatory protein, C terminal VAA_RS08865 PF00072 Response regulator receiver domain VAA_RS08870 PF00672 HAMP domain VAA_RS08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS08870 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS08875 PF01386 Ribosomal L25p family VAA_RS08905 PF13737 Transposase DDE domain VAA_RS08920 PF00849 RNA pseudouridylate synthase VAA_RS08925 PF00209 Sodium:neurotransmitter symporter family VAA_RS08930 PF13091 PLD-like domain VAA_RS08930 PF13396 Phospholipase_D-nuclease N-terminal VAA_RS08935 PF01053 Cys/Met metabolism PLP-dependent enzyme VAA_RS08940 PF13302 Acetyltransferase (GNAT) domain VAA_RS08940 PF13673 Acetyltransferase (GNAT) domain VAA_RS08940 PF03352 Methyladenine glycosylase VAA_RS08940 PF00117 Glutamine amidotransferase class-I VAA_RS08940 PF00958 GMP synthase C terminal domain VAA_RS08950 PF06667 Phage shock protein B VAA_RS08955 PF04012 PspA/IM30 family VAA_RS08960 PF00158 Sigma-54 interaction domain VAA_RS08960 PF02954 Bacterial regulatory protein, Fis family VAA_RS08965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA_RS08970 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS08975 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA_RS08975 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS08980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA_RS08980 PF00005 ABC transporter VAA_RS08985 PF00005 ABC transporter VAA_RS09000 PF01368 DHH family VAA_RS09000 PF02833 DHHA2 domain VAA_RS09010 PF01568 Molydopterin dinucleotide binding domain VAA_RS09010 PF18364 Molybdopterin oxidoreductase N-terminal domain VAA_RS09010 PF00384 Molybdopterin oxidoreductase VAA_RS09015 PF03264 NapC/NirT cytochrome c family, N-terminal region VAA_RS09020 PF06796 Periplasmic nitrate reductase protein NapE VAA_RS09025 PF01226 Formate/nitrite transporter VAA_RS09040 PF03466 LysR substrate binding domain VAA_RS09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS09050 PF02698 DUF218 domain VAA_RS09055 PF00265 Thymidine kinase VAA_RS09060 PF02938 GAD domain VAA_RS09060 PF00152 tRNA synthetases class II (D, K and N) VAA_RS09060 PF01336 OB-fold nucleic acid binding domain VAA_RS09065 PF01904 Protein of unknown function DUF72 VAA_RS09070 PF05925 Enterobacterial virulence protein IpgD VAA_RS09075 PF13649 Methyltransferase domain VAA_RS09080 PF08003 Protein of unknown function (DUF1698) VAA_RS09085 PF18030 RimK PreATP-grasp domain VAA_RS09085 PF08443 RimK-like ATP-grasp domain VAA_RS09100 PF16330 MukB hinge domain VAA_RS09100 PF04310 MukB N-terminal VAA_RS09105 PF04288 MukE-like family VAA_RS09110 PF17193 MukF C-terminal domain VAA_RS09110 PF03882 MukF winged-helix domain VAA_RS09110 PF17192 MukF middle domain VAA_RS09115 PF13847 Methyltransferase domain VAA_RS09120 PF02698 DUF218 domain VAA_RS09125 PF00486 Transcriptional regulatory protein, C terminal VAA_RS09125 PF00072 Response regulator receiver domain VAA_RS09130 PF02613 Nitrate reductase delta subunit VAA_RS09135 PF00356 Bacterial regulatory proteins, lacI family VAA_RS09140 PF04993 TfoX N-terminal domain VAA_RS09140 PF04994 TfoX C-terminal domain VAA_RS09160 PF00534 Glycosyl transferases group 1 VAA_RS09160 PF08323 Starch synthase catalytic domain VAA_RS09165 PF00483 Nucleotidyl transferase VAA_RS09170 PF01396 Topoisomerase DNA binding C4 zinc finger VAA_RS09170 PF01751 Toprim domain VAA_RS09170 PF01131 DNA topoisomerase VAA_RS09170 PF08272 Topoisomerase I zinc-ribbon-like VAA_RS09175 PF10692 Protein of unknown function (DUF2498) VAA_RS09180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAA_RS09185 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VAA_RS09190 PF04377 Arginine-tRNA-protein transferase, C terminus VAA_RS09190 PF04376 Arginine-tRNA-protein transferase, N terminus VAA_RS09195 PF01176 Translation initiation factor 1A / IF-1 VAA_RS09200 PF17871 AAA lid domain VAA_RS09200 PF00004 ATPase family associated with various cellular activities (AAA) VAA_RS09200 PF10431 C-terminal, D2-small domain, of ClpB protein VAA_RS09200 PF02861 Clp amino terminal domain, pathogenicity island component VAA_RS09200 PF07724 AAA domain (Cdc48 subfamily) VAA_RS09205 PF02617 ATP-dependent Clp protease adaptor protein ClpS VAA_RS09210 PF00313 'Cold-shock' DNA-binding domain VAA_RS09215 PF03971 Monomeric isocitrate dehydrogenase VAA_RS09225 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VAA_RS09225 PF01502 Phosphoribosyl-AMP cyclohydrolase VAA_RS09230 PF00977 Histidine biosynthesis protein VAA_RS09235 PF00977 Histidine biosynthesis protein VAA_RS09240 PF00117 Glutamine amidotransferase class-I VAA_RS09245 PF08645 Polynucleotide kinase 3 phosphatase VAA_RS09245 PF00475 Imidazoleglycerol-phosphate dehydratase VAA_RS09250 PF00155 Aminotransferase class I and II VAA_RS09255 PF00815 Histidinol dehydrogenase VAA_RS09260 PF08029 HisG, C-terminal domain VAA_RS09260 PF01634 ATP phosphoribosyltransferase VAA_RS09265 PF03553 Na+/H+ antiporter family VAA_RS09270 PF00816 H-NS histone family VAA_RS09275 PF00294 pfkB family carbohydrate kinase VAA_RS09290 PF04356 Protein of unknown function (DUF489) VAA_RS09295 PF08328 Adenylosuccinate lyase C-terminal VAA_RS09295 PF00206 Lyase VAA_RS09300 PF00266 Aminotransferase class-V VAA_RS09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS09310 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA_RS09310 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS09325 PF04993 TfoX N-terminal domain VAA_RS09325 PF04994 TfoX C-terminal domain VAA_RS09335 PF03956 Lysine exporter LysO VAA_RS09345 PF00282 Pyridoxal-dependent decarboxylase conserved domain VAA_RS09350 PF01380 SIS domain VAA_RS09350 PF01418 Helix-turn-helix domain, rpiR family VAA_RS09355 PF00465 Iron-containing alcohol dehydrogenase VAA_RS09360 PF00462 Glutaredoxin VAA_RS09365 PF02080 TrkA-C domain VAA_RS09365 PF06826 Predicted Permease Membrane Region VAA_RS09370 PF01259 SAICAR synthetase VAA_RS09380 PF03949 Malic enzyme, NAD binding domain VAA_RS09380 PF00390 Malic enzyme, N-terminal domain VAA_RS09390 PF02698 DUF218 domain VAA_RS09395 PF00266 Aminotransferase class-V VAA_RS09405 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS09405 PF00072 Response regulator receiver domain VAA_RS09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS09415 PF00664 ABC transporter transmembrane region VAA_RS09415 PF00005 ABC transporter VAA_RS09420 PF00005 ABC transporter VAA_RS09420 PF00664 ABC transporter transmembrane region VAA_RS09435 PF08281 Sigma-70, region 4 VAA_RS09435 PF04542 Sigma-70 region 2 VAA_RS09445 PF00563 EAL domain VAA_RS09445 PF03707 Bacterial signalling protein N terminal repeat VAA_RS09445 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS09450 PF01479 S4 domain VAA_RS09450 PF00849 RNA pseudouridylate synthase VAA_RS09455 PF01300 Telomere recombination VAA_RS09465 PF08056 Tryptophan operon leader peptide VAA_RS09470 PF04715 Anthranilate synthase component I, N terminal region VAA_RS09470 PF00425 chorismate binding enzyme VAA_RS09475 PF00117 Glutamine amidotransferase class-I VAA_RS09480 PF00591 Glycosyl transferase family, a/b domain VAA_RS09480 PF02885 Glycosyl transferase family, helical bundle domain VAA_RS09485 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VAA_RS09485 PF00218 Indole-3-glycerol phosphate synthase VAA_RS09490 PF00291 Pyridoxal-phosphate dependent enzyme VAA_RS09495 PF00290 Tryptophan synthase alpha chain VAA_RS09505 PF00375 Sodium:dicarboxylate symporter family VAA_RS09515 PF04279 Intracellular septation protein A VAA_RS09520 PF03061 Thioesterase superfamily VAA_RS09525 PF03795 YCII-related domain VAA_RS09535 PF08267 Cobalamin-independent synthase, N-terminal domain VAA_RS09535 PF01717 Cobalamin-independent synthase, Catalytic domain VAA_RS09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS09540 PF03466 LysR substrate binding domain VAA_RS09555 PF00989 PAS fold VAA_RS09555 PF00563 EAL domain VAA_RS09555 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS09555 PF01590 GAF domain VAA_RS09565 PF04055 Radical SAM superfamily VAA_RS09565 PF11842 Domain of unknown function (DUF3362) VAA_RS09565 PF08497 Radical SAM N-terminal VAA_RS09575 PF16036 Chalcone isomerase-like VAA_RS09600 PF00106 short chain dehydrogenase VAA_RS09610 PF01435 Peptidase family M48 VAA_RS09615 PF09397 Ftsk gamma domain VAA_RS09615 PF01580 FtsK/SpoIIIE family VAA_RS09615 PF17854 FtsK alpha domain VAA_RS09615 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VAA_RS09620 PF01037 Lrp/AsnC ligand binding domain VAA_RS09625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VAA_RS09625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VAA_RS09635 PF03466 LysR substrate binding domain VAA_RS09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS09645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VAA_RS09650 PF18073 Rubredoxin metal binding domain VAA_RS09655 PF06305 Lipopolysaccharide assembly protein A domain VAA_RS09660 PF00216 Bacterial DNA-binding protein VAA_RS09665 PF00575 S1 RNA binding domain VAA_RS09670 PF02224 Cytidylate kinase VAA_RS09680 PF13145 PPIC-type PPIASE domain VAA_RS09685 PF00216 Bacterial DNA-binding protein VAA_RS09690 PF00004 ATPase family associated with various cellular activities (AAA) VAA_RS09690 PF05362 Lon protease (S16) C-terminal proteolytic domain VAA_RS09690 PF02190 ATP-dependent protease La (LON) substrate-binding domain VAA_RS09695 PF10431 C-terminal, D2-small domain, of ClpB protein VAA_RS09695 PF06689 ClpX C4-type zinc finger VAA_RS09695 PF07724 AAA domain (Cdc48 subfamily) VAA_RS09700 PF00574 Clp protease VAA_RS09705 PF05697 Bacterial trigger factor protein (TF) VAA_RS09705 PF05698 Bacterial trigger factor protein (TF) C-terminus VAA_RS09705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA_RS09715 PF02743 Cache domain VAA_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS09715 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS09720 PF00158 Sigma-54 interaction domain VAA_RS09720 PF02954 Bacterial regulatory protein, Fis family VAA_RS09720 PF00072 Response regulator receiver domain VAA_RS09725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAA_RS09730 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAA_RS09745 PF01547 Bacterial extracellular solute-binding protein VAA_RS09750 PF00672 HAMP domain VAA_RS09750 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS09755 PF00486 Transcriptional regulatory protein, C terminal VAA_RS09755 PF00072 Response regulator receiver domain VAA_RS09760 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VAA_RS09765 PF03315 Serine dehydratase beta chain VAA_RS09765 PF03313 Serine dehydratase alpha chain VAA_RS09775 PF00271 Helicase conserved C-terminal domain VAA_RS09775 PF00270 DEAD/DEAH box helicase VAA_RS09780 PF02903 Alpha amylase, N-terminal ig-like domain VAA_RS09780 PF00128 Alpha amylase, catalytic domain VAA_RS09780 PF16657 Maltogenic Amylase, C-terminal domain VAA_RS09785 PF02028 BCCT, betaine/carnitine/choline family transporter VAA_RS09790 PF02574 Homocysteine S-methyltransferase VAA_RS09790 PF02607 B12 binding domain VAA_RS09790 PF00809 Pterin binding enzyme VAA_RS09790 PF02965 Vitamin B12 dependent methionine synthase, activation domain VAA_RS09790 PF02310 B12 binding domain VAA_RS09800 PF09905 DNA-binding protein VF530 VAA_RS09815 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VAA_RS09815 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VAA_RS09820 PF00704 Glycosyl hydrolases family 18 VAA_RS09820 PF06483 Chitinase C VAA_RS09825 PF01773 Na+ dependent nucleoside transporter N-terminus VAA_RS09825 PF07670 Nucleoside recognition VAA_RS09825 PF07662 Na+ dependent nucleoside transporter C-terminus VAA_RS09830 PF03466 LysR substrate binding domain VAA_RS09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS09835 PF13406 Transglycosylase SLT domain VAA_RS09840 PF05166 YcgL domain VAA_RS09845 PF03775 Septum formation inhibitor MinC, C-terminal domain VAA_RS09845 PF05209 Septum formation inhibitor MinC, N-terminal domain VAA_RS09850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAA_RS09855 PF03776 Septum formation topological specificity factor MinE VAA_RS09860 PF01612 3'-5' exonuclease VAA_RS09860 PF00570 HRDC domain VAA_RS09865 PF13193 AMP-binding enzyme C-terminal domain VAA_RS09865 PF00501 AMP-binding enzyme VAA_RS09870 PF00561 alpha/beta hydrolase fold VAA_RS09885 PF00814 Glycoprotease family VAA_RS09890 PF04851 Type III restriction enzyme, res subunit VAA_RS09890 PF13307 Helicase C-terminal domain VAA_RS09900 PF00551 Formyl transferase VAA_RS09900 PF01842 ACT domain VAA_RS09905 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS09905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAA_RS09910 PF01343 Peptidase family S49 VAA_RS09915 PF17763 Glutaminase/Asparaginase C-terminal domain VAA_RS09915 PF00710 Asparaginase, N-terminal VAA_RS09920 PF07023 Protein of unknown function (DUF1315) VAA_RS09930 PF01641 SelR domain VAA_RS09935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAA_RS09935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA_RS09940 PF01263 Aldose 1-epimerase VAA_RS09945 PF13847 Methyltransferase domain VAA_RS09960 PF03692 Putative zinc- or iron-chelating domain VAA_RS09965 PF03692 Putative zinc- or iron-chelating domain VAA_RS09970 PF13662 Toprim domain VAA_RS09970 PF02132 RecR protein VAA_RS09975 PF02575 YbaB/EbfC DNA-binding family VAA_RS09980 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VAA_RS09980 PF12169 DNA polymerase III subunits gamma and tau domain III VAA_RS09980 PF12170 DNA polymerase III tau subunit V interacting with alpha VAA_RS09985 PF00156 Phosphoribosyl transferase domain VAA_RS09990 PF04304 Protein of unknown function (DUF454) VAA_RS10000 PF00072 Response regulator receiver domain VAA_RS10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS10005 PF03466 LysR substrate binding domain VAA_RS10010 PF00881 Nitroreductase family VAA_RS10020 PF02803 Thiolase, C-terminal domain VAA_RS10020 PF00108 Thiolase, N-terminal domain VAA_RS10025 PF08281 Sigma-70, region 4 VAA_RS10025 PF04542 Sigma-70 region 2 VAA_RS10035 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA_RS10040 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA_RS10045 PF12557 Cob(I)alamin adenosyltransferase N terminal VAA_RS10045 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VAA_RS10050 PF05170 AsmA family VAA_RS10055 PF00485 Phosphoribulokinase / Uridine kinase family VAA_RS10060 PF10609 NUBPL iron-transfer P-loop NTPase VAA_RS10065 PF01588 Putative tRNA binding domain VAA_RS10065 PF09334 tRNA synthetases class I (M) VAA_RS10075 PF01048 Phosphorylase superfamily VAA_RS10080 PF00403 Heavy-metal-associated domain VAA_RS10085 PF00571 CBS domain VAA_RS10085 PF01743 Poly A polymerase head domain VAA_RS10090 PF07694 5TMR of 5TMR-LYT VAA_RS10090 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS10095 PF02391 MoaE protein VAA_RS10100 PF02597 ThiS family VAA_RS10105 PF01967 MoaC family VAA_RS10110 PF00994 Probable molybdopterin binding domain VAA_RS10115 PF04055 Radical SAM superfamily VAA_RS10115 PF06463 Molybdenum Cofactor Synthesis C VAA_RS10120 PF01933 Uncharacterised protein family UPF0052 VAA_RS10125 PF01627 Hpt domain VAA_RS10130 PF02954 Bacterial regulatory protein, Fis family VAA_RS10130 PF00158 Sigma-54 interaction domain VAA_RS10130 PF00072 Response regulator receiver domain VAA_RS10135 PF04851 Type III restriction enzyme, res subunit VAA_RS10135 PF02151 UvrB/uvrC motif VAA_RS10135 PF00271 Helicase conserved C-terminal domain VAA_RS10135 PF12344 Ultra-violet resistance protein B VAA_RS10135 PF17757 UvrB interaction domain VAA_RS10160 PF00425 chorismate binding enzyme VAA_RS10165 PF13193 AMP-binding enzyme C-terminal domain VAA_RS10165 PF00501 AMP-binding enzyme VAA_RS10170 PF00857 Isochorismatase family VAA_RS10170 PF00550 Phosphopantetheine attachment site VAA_RS10175 PF05977 Transmembrane secretion effector VAA_RS10180 PF13193 AMP-binding enzyme C-terminal domain VAA_RS10180 PF00668 Condensation domain VAA_RS10180 PF00550 Phosphopantetheine attachment site VAA_RS10180 PF00501 AMP-binding enzyme VAA_RS10185 PF14319 Transposase zinc-binding domain VAA_RS10185 PF04986 Putative transposase VAA_RS10190 PF13193 AMP-binding enzyme C-terminal domain VAA_RS10190 PF00975 Thioesterase domain VAA_RS10190 PF00550 Phosphopantetheine attachment site VAA_RS10190 PF00668 Condensation domain VAA_RS10190 PF00501 AMP-binding enzyme VAA_RS10200 PF00756 Putative esterase VAA_RS10200 PF11806 Domain of unknown function (DUF3327) VAA_RS10205 PF07715 TonB-dependent Receptor Plug Domain VAA_RS10210 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VAA_RS10210 PF01648 4'-phosphopantetheinyl transferase superfamily VAA_RS10215 PF02508 Rnf-Nqr subunit, membrane protein VAA_RS10220 PF04060 Putative Fe-S cluster VAA_RS10225 PF10531 SLBB domain VAA_RS10225 PF13375 RnfC Barrel sandwich hybrid domain VAA_RS10225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VAA_RS10225 PF12838 4Fe-4S dicluster domain VAA_RS10230 PF03116 NQR2, RnfD, RnfE family VAA_RS10235 PF04205 FMN-binding domain VAA_RS10240 PF02508 Rnf-Nqr subunit, membrane protein VAA_RS10245 PF00633 Helix-hairpin-helix motif VAA_RS10245 PF00730 HhH-GPD superfamily base excision DNA repair protein VAA_RS10245 PF10576 Iron-sulfur binding domain of endonuclease III VAA_RS10250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAA_RS10255 PF18393 MotY N-terminal domain VAA_RS10255 PF00691 OmpA family VAA_RS10260 PF00929 Exonuclease VAA_RS10265 PF03553 Na+/H+ antiporter family VAA_RS10265 PF13726 Na+-H+ antiporter family VAA_RS10270 PF00156 Phosphoribosyl transferase domain VAA_RS10275 PF02674 Colicin V production protein VAA_RS10280 PF05036 Sporulation related domain VAA_RS10285 PF08245 Mur ligase middle domain VAA_RS10285 PF02875 Mur ligase family, glutamate ligase domain VAA_RS10290 PF17848 Acetyl-coA carboxylase zinc finger domain VAA_RS10290 PF01039 Carboxyl transferase domain VAA_RS10295 PF01416 tRNA pseudouridine synthase VAA_RS10305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VAA_RS10305 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAA_RS10310 PF02378 Phosphotransferase system, EIIC VAA_RS10310 PF00367 phosphotransferase system, EIIB VAA_RS10310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VAA_RS10315 PF01979 Amidohydrolase family VAA_RS10320 PF00480 ROK family VAA_RS10320 PF01047 MarR family VAA_RS10325 PF00999 Sodium/hydrogen exchanger family VAA_RS10325 PF02254 TrkA-N domain VAA_RS10330 PF13537 Glutamine amidotransferase domain VAA_RS10330 PF00733 Asparagine synthase VAA_RS10335 PF02357 Transcription termination factor nusG VAA_RS10340 PF00854 POT family VAA_RS10350 PF05191 Adenylate kinase, active site lid VAA_RS10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS10355 PF00183 Hsp90 protein VAA_RS10360 PF00486 Transcriptional regulatory protein, C terminal VAA_RS10365 PF17323 Trans-membrane regulatory protein ToxS VAA_RS10375 PF12850 Calcineurin-like phosphoesterase superfamily domain VAA_RS10380 PF01370 NAD dependent epimerase/dehydratase family VAA_RS10380 PF08338 Domain of unknown function (DUF1731) VAA_RS10385 PF00085 Thioredoxin VAA_RS10390 PF01145 SPFH domain / Band 7 family VAA_RS10390 PF16200 C-terminal region of band_7 VAA_RS10400 PF13411 MerR HTH family regulatory protein VAA_RS10405 PF04986 Putative transposase VAA_RS10405 PF14319 Transposase zinc-binding domain VAA_RS10410 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VAA_RS10415 PF13609 Gram-negative porin VAA_RS10420 PF03120 NAD-dependent DNA ligase OB-fold domain VAA_RS10420 PF00533 BRCA1 C Terminus (BRCT) domain VAA_RS10420 PF01653 NAD-dependent DNA ligase adenylation domain VAA_RS10420 PF12826 Helix-hairpin-helix motif VAA_RS10420 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VAA_RS10425 PF04354 ZipA, C-terminal FtsZ-binding domain VAA_RS10435 PF00291 Pyridoxal-phosphate dependent enzyme VAA_RS10440 PF00381 PTS HPr component phosphorylation site VAA_RS10445 PF00391 PEP-utilising enzyme, mobile domain VAA_RS10445 PF05524 PEP-utilising enzyme, N-terminal VAA_RS10445 PF02896 PEP-utilising enzyme, TIM barrel domain VAA_RS10450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VAA_RS10455 PF01494 FAD binding domain VAA_RS10460 PF04055 Radical SAM superfamily VAA_RS10460 PF01938 TRAM domain VAA_RS10460 PF00919 Uncharacterized protein family UPF0004 VAA_RS10465 PF02562 PhoH-like protein VAA_RS10470 PF02130 Uncharacterized protein family UPF0054 VAA_RS10475 PF03471 Transporter associated domain VAA_RS10475 PF00571 CBS domain VAA_RS10480 PF00795 Carbon-nitrogen hydrolase VAA_RS10485 PF07295 Zinc-ribbon containing domain VAA_RS10490 PF08264 Anticodon-binding domain of tRNA VAA_RS10490 PF00133 tRNA synthetases class I (I, L, M and V) VAA_RS10490 PF13603 Leucyl-tRNA synthetase, Domain 2 VAA_RS10495 PF04390 Lipopolysaccharide-assembly VAA_RS10500 PF06144 DNA polymerase III, delta subunit VAA_RS10500 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VAA_RS10510 PF02590 Predicted SPOUT methyltransferase VAA_RS10515 PF03717 Penicillin-binding Protein dimerisation domain VAA_RS10515 PF00905 Penicillin binding protein transpeptidase domain VAA_RS10520 PF01098 Cell cycle protein VAA_RS10525 PF05036 Sporulation related domain VAA_RS10525 PF03330 Lytic transglycolase VAA_RS10530 PF00768 D-alanyl-D-alanine carboxypeptidase VAA_RS10530 PF07943 Penicillin-binding protein 5, C-terminal domain VAA_RS10535 PF04359 Protein of unknown function (DUF493) VAA_RS10540 PF03099 Biotin/lipoate A/B protein ligase family VAA_RS10545 PF04055 Radical SAM superfamily VAA_RS10545 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VAA_RS10555 PF00464 Serine hydroxymethyltransferase VAA_RS10565 PF02397 Bacterial sugar transferase VAA_RS10580 PF13614 AAA domain VAA_RS10600 PF17945 Beta/Gamma crystallin VAA_RS10600 PF12561 ToxR activated gene A lipoprotein domain VAA_RS10605 PF03808 Glycosyl transferase WecB/TagA/CpsF family VAA_RS10615 PF00132 Bacterial transferase hexapeptide (six repeats) VAA_RS10615 PF06426 Serine acetyltransferase, N-terminal VAA_RS10650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAA_RS10650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAA_RS10650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VAA_RS10655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAA_RS10655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAA_RS10655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VAA_RS10665 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAA_RS10670 PF00873 AcrB/AcrD/AcrF family VAA_RS10675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA_RS10715 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS10715 PF00672 HAMP domain VAA_RS10720 PF00072 Response regulator receiver domain VAA_RS10720 PF00486 Transcriptional regulatory protein, C terminal VAA_RS10730 PF02378 Phosphotransferase system, EIIC VAA_RS10730 PF00367 phosphotransferase system, EIIB VAA_RS10735 PF00356 Bacterial regulatory proteins, lacI family VAA_RS10750 PF00005 ABC transporter VAA_RS10750 PF09383 NIL domain VAA_RS10760 PF03180 NLPA lipoprotein VAA_RS10765 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VAA_RS10770 PF07348 Syd protein (SUKH-2) VAA_RS10775 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VAA_RS10775 PF14489 QueF-like protein VAA_RS10790 PF03641 Possible lysine decarboxylase VAA_RS10790 PF11892 Domain of unknown function (DUF3412) VAA_RS10790 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VAA_RS10795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VAA_RS10795 PF01367 5'-3' exonuclease, C-terminal SAM fold VAA_RS10800 PF01728 FtsJ-like methyltransferase VAA_RS10800 PF18125 RlmM ferredoxin-like domain VAA_RS10805 PF04241 Protein of unknown function (DUF423) VAA_RS10810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS10810 PF03466 LysR substrate binding domain VAA_RS10815 PF02926 THUMP domain VAA_RS10815 PF02568 Thiamine biosynthesis protein (ThiI) VAA_RS10820 PF13677 Membrane MotB of proton-channel complex MotA/MotB VAA_RS10820 PF00691 OmpA family VAA_RS10820 PF13677 Membrane MotB of proton-channel complex MotA/MotB VAA_RS10820 PF00691 OmpA family VAA_RS10825 PF01618 MotA/TolQ/ExbB proton channel family VAA_RS10830 PF02609 Exonuclease VII small subunit VAA_RS10835 PF00348 Polyprenyl synthetase VAA_RS10840 PF02780 Transketolase, C-terminal domain VAA_RS10840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VAA_RS10840 PF02779 Transketolase, pyrimidine binding domain VAA_RS10845 PF00849 RNA pseudouridylate synthase VAA_RS10850 PF04287 tRNA pseudouridine synthase C VAA_RS10880 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VAA_RS10885 PF00444 Ribosomal protein L36 VAA_RS10890 PF01197 Ribosomal protein L31 VAA_RS10895 PF18389 TrmO C-terminal domain VAA_RS10895 PF01980 tRNA-methyltransferase O VAA_RS10900 PF04073 Aminoacyl-tRNA editing domain VAA_RS10900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAA_RS10900 PF03129 Anticodon binding domain VAA_RS10905 PF04391 Protein of unknown function (DUF533) VAA_RS10910 PF06786 Uncharacterised protein family (UPF0253) VAA_RS10925 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VAA_RS10925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VAA_RS10925 PF02769 AIR synthase related protein, C-terminal domain VAA_RS10935 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA_RS10935 PF01464 Transglycosylase SLT domain VAA_RS10940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAA_RS10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS10945 PF03466 LysR substrate binding domain VAA_RS10950 PF00107 Zinc-binding dehydrogenase VAA_RS10950 PF08240 Alcohol dehydrogenase GroES-like domain VAA_RS10955 PF00756 Putative esterase VAA_RS10985 PF07963 Prokaryotic N-terminal methylation motif VAA_RS10985 PF00114 Pilin (bacterial filament) VAA_RS10995 PF00012 Hsp70 protein VAA_RS11000 PF01025 GrpE VAA_RS11005 PF01513 ATP-NAD kinase VAA_RS11010 PF13737 Transposase DDE domain VAA_RS11020 PF02463 RecF/RecN/SMC N terminal domain VAA_RS11025 PF04355 SmpA / OmlA family VAA_RS11030 PF03658 RnfH family Ubiquitin VAA_RS11035 PF03364 Polyketide cyclase / dehydrase and lipid transport VAA_RS11040 PF01668 SmpB protein VAA_RS11045 PF13356 Arm DNA-binding domain VAA_RS11045 PF00589 Phage integrase family VAA_RS11050 PF02384 N-6 DNA Methylase VAA_RS11050 PF12161 HsdM N-terminal domain VAA_RS11070 PF08463 EcoEI R protein C-terminal VAA_RS11070 PF00271 Helicase conserved C-terminal domain VAA_RS11070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VAA_RS11070 PF04851 Type III restriction enzyme, res subunit VAA_RS11075 PF14338 Mrr N-terminal domain VAA_RS11075 PF04471 Restriction endonuclease VAA_RS11090 PF04002 RadC-like JAB domain VAA_RS11195 PF13737 Transposase DDE domain VAA_RS11205 PF01066 CDP-alcohol phosphatidyltransferase VAA_RS11210 PF00005 ABC transporter VAA_RS11215 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS11220 PF13416 Bacterial extracellular solute-binding protein VAA_RS11230 PF06945 Protein of unknown function (DUF1289) VAA_RS11240 PF02872 5'-nucleotidase, C-terminal domain VAA_RS11240 PF00149 Calcineurin-like phosphoesterase VAA_RS11245 PF13737 Transposase DDE domain VAA_RS11250 PF02028 BCCT, betaine/carnitine/choline family transporter VAA_RS11255 PF03466 LysR substrate binding domain VAA_RS11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS11260 PF01266 FAD dependent oxidoreductase VAA_RS11270 PF01184 GPR1/FUN34/yaaH family VAA_RS11275 PF00704 Glycosyl hydrolases family 18 VAA_RS11275 PF06483 Chitinase C VAA_RS11280 PF08543 Phosphomethylpyrimidine kinase VAA_RS11285 PF00117 Glutamine amidotransferase class-I VAA_RS11285 PF00958 GMP synthase C terminal domain VAA_RS11285 PF02540 NAD synthase VAA_RS11290 PF00478 IMP dehydrogenase / GMP reductase domain VAA_RS11290 PF00571 CBS domain VAA_RS11295 PF13742 OB-fold nucleic acid binding domain VAA_RS11295 PF02601 Exonuclease VII, large subunit VAA_RS11305 PF01926 50S ribosome-binding GTPase VAA_RS11305 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VAA_RS11310 PF13360 PQQ-like domain VAA_RS11315 PF09976 Tetratricopeptide repeat-like domain VAA_RS11320 PF13393 Histidyl-tRNA synthetase VAA_RS11320 PF03129 Anticodon binding domain VAA_RS11325 PF04551 GcpE protein VAA_RS11330 PF13464 Domain of unknown function (DUF4115) VAA_RS11335 PF04055 Radical SAM superfamily VAA_RS11340 PF00334 Nucleoside diphosphate kinase VAA_RS11345 PF12404 Peptidase VAA_RS11345 PF00883 Cytosol aminopeptidase family, catalytic domain VAA_RS11350 PF04384 Iron-sulphur cluster assembly VAA_RS11355 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA_RS11360 PF00012 Hsp70 protein VAA_RS11365 PF07743 HSCB C-terminal oligomerisation domain VAA_RS11365 PF00226 DnaJ domain VAA_RS11370 PF01521 Iron-sulphur cluster biosynthesis VAA_RS11375 PF01592 NifU-like N terminal domain VAA_RS11380 PF00266 Aminotransferase class-V VAA_RS11385 PF02082 Transcriptional regulator VAA_RS11390 PF00588 SpoU rRNA Methylase family VAA_RS11395 PF00459 Inositol monophosphatase family VAA_RS11400 PF02355 Protein export membrane protein VAA_RS11400 PF07549 SecD/SecF GG Motif VAA_RS11405 PF02355 Protein export membrane protein VAA_RS11405 PF07549 SecD/SecF GG Motif VAA_RS11405 PF13721 SecD export protein N-terminal TM region VAA_RS11410 PF02699 Preprotein translocase subunit VAA_RS11415 PF01702 Queuine tRNA-ribosyltransferase VAA_RS11420 PF02547 Queuosine biosynthesis protein VAA_RS11425 PF00571 CBS domain VAA_RS11430 PF00463 Isocitrate lyase family VAA_RS11435 PF01274 Malate synthase VAA_RS11440 PF03466 LysR substrate binding domain VAA_RS11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS11445 PF00578 AhpC/TSA family VAA_RS11445 PF10417 C-terminal domain of 1-Cys peroxiredoxin VAA_RS11450 PF03932 CutC family VAA_RS11455 PF01895 PhoU domain VAA_RS11460 PF00005 ABC transporter VAA_RS11465 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS11470 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS11475 PF17941 Polyphosphate kinase C-terminal domain 1 VAA_RS11475 PF13090 Polyphosphate kinase C-terminal domain 2 VAA_RS11475 PF02503 Polyphosphate kinase middle domain VAA_RS11475 PF13089 Polyphosphate kinase N-terminal domain VAA_RS11480 PF02541 Ppx/GppA phosphatase family VAA_RS11485 PF12849 PBP superfamily domain VAA_RS11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS11490 PF00989 PAS fold VAA_RS11490 PF11808 Phosphate regulon sensor protein PhoR VAA_RS11490 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS11495 PF00486 Transcriptional regulatory protein, C terminal VAA_RS11495 PF00072 Response regulator receiver domain VAA_RS11500 PF04381 Putative exonuclease, RdgC VAA_RS11505 PF01136 Peptidase family U32 VAA_RS11505 PF16325 Peptidase family U32 C-terminal domain VAA_RS11510 PF00037 4Fe-4S binding domain VAA_RS11515 PF00881 Nitroreductase family VAA_RS11560 PF07724 AAA domain (Cdc48 subfamily) VAA_RS11560 PF17871 AAA lid domain VAA_RS11560 PF00004 ATPase family associated with various cellular activities (AAA) VAA_RS11560 PF02861 Clp amino terminal domain, pathogenicity island component VAA_RS11560 PF10431 C-terminal, D2-small domain, of ClpB protein VAA_RS11565 PF02578 Multi-copper polyphenol oxidoreductase laccase VAA_RS11570 PF00849 RNA pseudouridylate synthase VAA_RS11570 PF01479 S4 domain VAA_RS11575 PF13525 Outer membrane lipoprotein VAA_RS11580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VAA_RS11585 PF00800 Prephenate dehydratase VAA_RS11585 PF01817 Chorismate mutase type II VAA_RS11590 PF13416 Bacterial extracellular solute-binding protein VAA_RS11595 PF00563 EAL domain VAA_RS11595 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS11600 PF01931 Protein of unknown function DUF84 VAA_RS11605 PF01371 Trp repressor protein VAA_RS11610 PF14718 Soluble lytic murein transglycosylase L domain VAA_RS11610 PF01464 Transglycosylase SLT domain VAA_RS11615 PF00005 ABC transporter VAA_RS11615 PF12848 ABC transporter VAA_RS11620 PF07238 PilZ domain VAA_RS11625 PF01817 Chorismate mutase type II VAA_RS11625 PF02153 Prephenate dehydrogenase VAA_RS11630 PF00793 DAHP synthetase I family VAA_RS11635 PF06580 Histidine kinase VAA_RS11635 PF07694 5TMR of 5TMR-LYT VAA_RS11645 PF00933 Glycosyl hydrolase family 3 N terminal domain VAA_RS11650 PF03702 Anhydro-N-acetylmuramic acid kinase VAA_RS11655 PF13580 SIS domain VAA_RS11670 PF02554 Carbon starvation protein CstA VAA_RS11675 PF02401 LytB protein VAA_RS11680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA_RS11685 PF01252 Signal peptidase (SPase) II VAA_RS11690 PF00133 tRNA synthetases class I (I, L, M and V) VAA_RS11690 PF06827 Zinc finger found in FPG and IleRS VAA_RS11690 PF08264 Anticodon-binding domain of tRNA VAA_RS11695 PF06574 FAD synthetase VAA_RS11695 PF01687 Riboflavin kinase VAA_RS11700 PF03023 Lipid II flippase MurJ VAA_RS11705 PF01649 Ribosomal protein S20 VAA_RS11710 PF01022 Bacterial regulatory protein, arsR family VAA_RS11715 PF03466 LysR substrate binding domain VAA_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS11720 PF02690 Na+/Pi-cotransporter VAA_RS11725 PF00303 Thymidylate synthase VAA_RS11730 PF00303 Thymidylate synthase VAA_RS11740 PF00665 Integrase core domain VAA_RS11745 PF01527 Transposase VAA_RS11765 PF13007 Transposase C of IS166 homeodomain VAA_RS11765 PF03050 Transposase IS66 family VAA_RS11765 PF13817 IS66 C-terminal element VAA_RS11765 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS11800 PF13657 HipA N-terminal domain VAA_RS11800 PF07804 HipA-like C-terminal domain VAA_RS11810 PF01381 Helix-turn-helix VAA_RS11815 PF07411 Domain of unknown function (DUF1508) VAA_RS11835 PF03050 Transposase IS66 family VAA_RS11835 PF13817 IS66 C-terminal element VAA_RS11835 PF13007 Transposase C of IS166 homeodomain VAA_RS11835 PF13005 zinc-finger binding domain of transposase IS66 VAA_RS11845 PF00884 Sulfatase VAA_RS11845 PF08019 Phosphoethanolamine transferase EptA/EptB VAA_RS11850 PF01219 Prokaryotic diacylglycerol kinase VAA_RS11875 PF00303 Thymidylate synthase VAA_RS11880 PF01790 Prolipoprotein diacylglyceryl transferase VAA_RS11885 PF01925 Sulfite exporter TauE/SafE VAA_RS11890 PF00391 PEP-utilising enzyme, mobile domain VAA_RS11890 PF02896 PEP-utilising enzyme, TIM barrel domain VAA_RS11890 PF01590 GAF domain VAA_RS11890 PF05524 PEP-utilising enzyme, N-terminal VAA_RS11895 PF00293 NUDIX domain VAA_RS11900 PF02976 DNA mismatch repair enzyme MutH VAA_RS11905 PF00248 Aldo/keto reductase family VAA_RS11915 PF02954 Bacterial regulatory protein, Fis family VAA_RS11915 PF00072 Response regulator receiver domain VAA_RS11915 PF00158 Sigma-54 interaction domain VAA_RS11920 PF00152 tRNA synthetases class II (D, K and N) VAA_RS11920 PF01336 OB-fold nucleic acid binding domain VAA_RS11925 PF00472 RF-1 domain VAA_RS11925 PF03462 PCRF domain VAA_RS11930 PF05525 Branched-chain amino acid transport protein VAA_RS11935 PF05175 Methyltransferase small domain VAA_RS11940 PF00270 DEAD/DEAH box helicase VAA_RS11940 PF00271 Helicase conserved C-terminal domain VAA_RS11945 PF03144 Elongation factor Tu domain 2 VAA_RS11945 PF00009 Elongation factor Tu GTP binding domain VAA_RS11945 PF16658 Class II release factor RF3, C-terminal domain VAA_RS11950 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS11950 PF03707 Bacterial signalling protein N terminal repeat VAA_RS11950 PF00563 EAL domain VAA_RS11955 PF00583 Acetyltransferase (GNAT) family VAA_RS11965 PF13508 Acetyltransferase (GNAT) domain VAA_RS11970 PF02036 SCP-2 sterol transfer family VAA_RS11975 PF00563 EAL domain VAA_RS11975 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS11975 PF03707 Bacterial signalling protein N terminal repeat VAA_RS11980 PF01136 Peptidase family U32 VAA_RS11985 PF01136 Peptidase family U32 VAA_RS11995 PF01047 MarR family VAA_RS12000 PF13181 Tetratricopeptide repeat VAA_RS12000 PF07719 Tetratricopeptide repeat VAA_RS12005 PF03725 3' exoribonuclease family, domain 2 VAA_RS12005 PF01138 3' exoribonuclease family, domain 1 VAA_RS12005 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VAA_RS12005 PF00575 S1 RNA binding domain VAA_RS12005 PF00013 KH domain VAA_RS12010 PF00312 Ribosomal protein S15 VAA_RS12015 PF01509 TruB family pseudouridylate synthase (N terminal domain) VAA_RS12015 PF09157 Pseudouridine synthase II TruB, C-terminal VAA_RS12015 PF16198 tRNA pseudouridylate synthase B C-terminal domain VAA_RS12020 PF02033 Ribosome-binding factor A VAA_RS12025 PF00009 Elongation factor Tu GTP binding domain VAA_RS12025 PF04760 Translation initiation factor IF-2, N-terminal region VAA_RS12025 PF08364 Bacterial translation initiation factor IF-2 associated region VAA_RS12025 PF11987 Translation-initiation factor 2 VAA_RS12030 PF13184 NusA-like KH domain VAA_RS12030 PF00575 S1 RNA binding domain VAA_RS12030 PF08529 NusA N-terminal domain VAA_RS12035 PF02576 RimP N-terminal domain VAA_RS12035 PF17384 RimP C-terminal SH3 domain VAA_RS12050 PF03840 Preprotein translocase SecG subunit VAA_RS12055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA_RS12055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA_RS12055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA_RS12055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA_RS12060 PF00809 Pterin binding enzyme VAA_RS12065 PF06480 FtsH Extracellular VAA_RS12065 PF17862 AAA+ lid domain VAA_RS12065 PF00004 ATPase family associated with various cellular activities (AAA) VAA_RS12065 PF01434 Peptidase family M41 VAA_RS12070 PF01728 FtsJ-like methyltransferase VAA_RS12075 PF01985 CRS1 / YhbY (CRM) domain VAA_RS12080 PF03449 Transcription elongation factor, N-terminal VAA_RS12080 PF01272 Transcription elongation factor, GreA/GreB, C-term VAA_RS12085 PF13609 Gram-negative porin VAA_RS12090 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VAA_RS12095 PF00571 CBS domain VAA_RS12095 PF01769 Divalent cation transporter VAA_RS12095 PF03448 MgtE intracellular N domain VAA_RS12105 PF00579 tRNA synthetases class I (W and Y) VAA_RS12105 PF01479 S4 domain VAA_RS12110 PF01476 LysM domain VAA_RS12110 PF01551 Peptidase family M23 VAA_RS12110 PF08525 Opacity-associated protein A N-terminal motif VAA_RS12115 PF00873 AcrB/AcrD/AcrF family VAA_RS12125 PF01521 Iron-sulphur cluster biosynthesis VAA_RS12130 PF00202 Aminotransferase class-III VAA_RS12135 PF01594 AI-2E family transporter VAA_RS12140 PF08468 Methyltransferase small domain N-terminal VAA_RS12140 PF05175 Methyltransferase small domain VAA_RS12145 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS12145 PF00072 Response regulator receiver domain VAA_RS12145 PF09308 LuxQ, periplasmic VAA_RS12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS12150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA_RS12155 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS12160 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS12160 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA_RS12165 PF00005 ABC transporter VAA_RS12165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA_RS12170 PF00005 ABC transporter VAA_RS12170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA_RS12180 PF01869 BadF/BadG/BcrA/BcrD ATPase family VAA_RS12185 PF00728 Glycosyl hydrolase family 20, catalytic domain VAA_RS12185 PF02838 Glycosyl hydrolase family 20, domain 2 VAA_RS12190 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VAA_RS12190 PF06165 Glycosyltransferase family 36 VAA_RS12195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA_RS12195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA_RS12195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA_RS12195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA_RS12200 PF08402 TOBE domain VAA_RS12200 PF00005 ABC transporter VAA_RS12210 PF13416 Bacterial extracellular solute-binding protein VAA_RS12215 PF00909 Ammonium Transporter Family VAA_RS12220 PF00543 Nitrogen regulatory protein P-II VAA_RS12225 PF06062 Uncharacterised protein family (UPF0231) VAA_RS12230 PF17853 GGDEF-like domain VAA_RS12230 PF05651 Putative sugar diacid recognition VAA_RS12230 PF13556 PucR C-terminal helix-turn-helix domain VAA_RS12235 PF02447 GntP family permease VAA_RS12240 PF02595 Glycerate kinase family VAA_RS12245 PF00330 Aconitase family (aconitate hydratase) VAA_RS12245 PF06434 Aconitate hydratase 2 N-terminus VAA_RS12245 PF11791 Aconitate B N-terminal domain VAA_RS12250 PF01734 Patatin-like phospholipase VAA_RS12255 PF00912 Transglycosylase VAA_RS12255 PF00905 Penicillin binding protein transpeptidase domain VAA_RS12255 PF14814 Bifunctional transglycosylase second domain VAA_RS12260 PF08482 ATP-dependent helicase C-terminal VAA_RS12260 PF00271 Helicase conserved C-terminal domain VAA_RS12260 PF00270 DEAD/DEAH box helicase VAA_RS12260 PF04408 Helicase associated domain (HA2) VAA_RS12265 PF17746 SfsA N-terminal OB domain VAA_RS12265 PF03749 Sugar fermentation stimulation protein RE domain VAA_RS12270 PF01258 Prokaryotic dksA/traR C4-type zinc finger VAA_RS12280 PF12627 Probable RNA and SrmB- binding site of polymerase A VAA_RS12280 PF01743 Poly A polymerase head domain VAA_RS12280 PF12626 Polymerase A arginine-rich C-terminus VAA_RS12285 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VAA_RS12290 PF02548 Ketopantoate hydroxymethyltransferase VAA_RS12295 PF02569 Pantoate-beta-alanine ligase VAA_RS12305 PF01061 ABC-2 type transporter VAA_RS12310 PF00005 ABC transporter VAA_RS12315 PF00916 Sulfate permease family VAA_RS12315 PF01740 STAS domain VAA_RS12320 PF00484 Carbonic anhydrase VAA_RS12325 PF00156 Phosphoribosyl transferase domain VAA_RS12330 PF00440 Bacterial regulatory proteins, tetR family VAA_RS12335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA_RS12335 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA_RS12340 PF00364 Biotin-requiring enzyme VAA_RS12340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAA_RS12340 PF02817 e3 binding domain VAA_RS12345 PF17831 Pyruvate dehydrogenase E1 component middle domain VAA_RS12345 PF00456 Transketolase, thiamine diphosphate binding domain VAA_RS12350 PF07729 FCD domain VAA_RS12350 PF00392 Bacterial regulatory proteins, gntR family VAA_RS12355 PF17768 RecJ OB domain VAA_RS12355 PF01368 DHH family VAA_RS12355 PF02272 DHHA1 domain VAA_RS12360 PF10411 Disulfide bond isomerase protein N-terminus VAA_RS12360 PF13098 Thioredoxin-like domain VAA_RS12365 PF00589 Phage integrase family VAA_RS12365 PF02899 Phage integrase, N-terminal SAM-like domain VAA_RS12370 PF00258 Flavodoxin VAA_RS12375 PF01510 N-acetylmuramoyl-L-alanine amidase VAA_RS12380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VAA_RS12380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VAA_RS12385 PF00114 Pilin (bacterial filament) VAA_RS12385 PF07963 Prokaryotic N-terminal methylation motif VAA_RS12390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VAA_RS12390 PF00437 Type II/IV secretion system protein VAA_RS12395 PF00482 Type II secretion system (T2SS), protein F VAA_RS12400 PF01478 Type IV leader peptidase family VAA_RS12400 PF06750 Bacterial Peptidase A24 N-terminal domain VAA_RS12405 PF01121 Dephospho-CoA kinase VAA_RS12410 PF07072 Cell division protein VAA_RS12415 PF03884 DNA gyrase inhibitor YacG VAA_RS12420 PF01245 Ribosomal protein L19 VAA_RS12425 PF01746 tRNA (Guanine-1)-methyltransferase VAA_RS12430 PF01782 RimM N-terminal domain VAA_RS12430 PF05239 PRC-barrel domain VAA_RS12435 PF00886 Ribosomal protein S16 VAA_RS12440 PF02978 Signal peptide binding domain VAA_RS12440 PF02881 SRP54-type protein, helical bundle domain VAA_RS12440 PF00448 SRP54-type protein, GTPase domain VAA_RS12445 PF01578 Cytochrome C assembly protein VAA_RS12455 PF02664 S-Ribosylhomocysteinase (LuxS) VAA_RS12460 PF04262 Glutamate-cysteine ligase VAA_RS12465 PF00675 Insulinase (Peptidase family M16) VAA_RS12465 PF05193 Peptidase M16 inactive domain VAA_RS12470 PF09335 SNARE associated Golgi protein VAA_RS12475 PF00107 Zinc-binding dehydrogenase VAA_RS12475 PF08240 Alcohol dehydrogenase GroES-like domain VAA_RS12480 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VAA_RS12485 PF00682 HMGL-like VAA_RS12485 PF02436 Conserved carboxylase domain VAA_RS12485 PF00364 Biotin-requiring enzyme VAA_RS12490 PF04277 Oxaloacetate decarboxylase, gamma chain VAA_RS12530 PF02599 Global regulator protein family VAA_RS12535 PF00696 Amino acid kinase family VAA_RS12535 PF01842 ACT domain VAA_RS12535 PF13840 ACT domain VAA_RS12540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAA_RS12540 PF02272 DHHA1 domain VAA_RS12540 PF01411 tRNA synthetases class II (A) VAA_RS12545 PF02631 RecX family VAA_RS12550 PF00154 recA bacterial DNA recombination protein VAA_RS12555 PF02464 Competence-damaged protein VAA_RS12560 PF12857 TOBE-like domain VAA_RS12560 PF00005 ABC transporter VAA_RS12565 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS12570 PF00528 Binding-protein-dependent transport system inner membrane component VAA_RS12580 PF00291 Pyridoxal-phosphate dependent enzyme VAA_RS12585 PF05192 MutS domain III VAA_RS12585 PF05190 MutS family domain IV VAA_RS12585 PF00488 MutS domain V VAA_RS12585 PF05188 MutS domain II VAA_RS12585 PF01624 MutS domain I VAA_RS12590 PF04545 Sigma-70, region 4 VAA_RS12590 PF04539 Sigma-70 region 3 VAA_RS12590 PF04542 Sigma-70 region 2 VAA_RS12590 PF00140 Sigma-70 factor, region 1.2 VAA_RS12595 PF01551 Peptidase family M23 VAA_RS12595 PF01476 LysM domain VAA_RS12605 PF01975 Survival protein SurE VAA_RS12610 PF01142 tRNA pseudouridine synthase D (TruD) VAA_RS12615 PF02542 YgbB family VAA_RS12620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VAA_RS12625 PF04977 Septum formation initiator VAA_RS12630 PF02673 Bacitracin resistance protein BacA VAA_RS12635 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VAA_RS12640 PF02152 Dihydroneopterin aldolase VAA_RS12645 PF02660 Glycerol-3-phosphate acyltransferase VAA_RS12655 PF00814 Glycoprotease family VAA_RS12660 PF01165 Ribosomal protein S21 VAA_RS12665 PF09424 Yqey-like protein VAA_RS12670 PF01807 CHC2 zinc finger VAA_RS12670 PF08275 DNA primase catalytic core, N-terminal domain VAA_RS12670 PF08278 DNA primase DnaG DnaB-binding VAA_RS12670 PF10410 DnaB-helicase binding domain of primase VAA_RS12675 PF03979 Sigma-70 factor, region 1.1 VAA_RS12675 PF04546 Sigma-70, non-essential region VAA_RS12675 PF04539 Sigma-70 region 3 VAA_RS12675 PF04542 Sigma-70 region 2 VAA_RS12675 PF00140 Sigma-70 factor, region 1.2 VAA_RS12675 PF04545 Sigma-70, region 4 VAA_RS12690 PF13657 HipA N-terminal domain VAA_RS12690 PF07804 HipA-like C-terminal domain VAA_RS12710 PF13361 UvrD-like helicase C-terminal domain VAA_RS12710 PF00580 UvrD/REP helicase N-terminal domain VAA_RS12760 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VAA_RS12760 PF04851 Type III restriction enzyme, res subunit VAA_RS12760 PF08463 EcoEI R protein C-terminal VAA_RS12760 PF00271 Helicase conserved C-terminal domain VAA_RS12770 PF01555 DNA methylase VAA_RS12790 PF12161 HsdM N-terminal domain VAA_RS12790 PF02384 N-6 DNA Methylase VAA_RS12800 PF00665 Integrase core domain VAA_RS12800 PF13333 Integrase core domain VAA_RS12800 PF13276 HTH-like domain VAA_RS12805 PF02384 N-6 DNA Methylase VAA_RS12805 PF12161 HsdM N-terminal domain VAA_RS12810 PF01420 Type I restriction modification DNA specificity domain VAA_RS12825 PF02796 Helix-turn-helix domain of resolvase VAA_RS12825 PF00239 Resolvase, N terminal domain VAA_RS12860 PF00665 Integrase core domain VAA_RS12865 PF01695 IstB-like ATP binding protein VAA_RS12885 PF15935 RNase LS, bacterial toxin VAA_RS12890 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA VAA_RS12895 PF00589 Phage integrase family VAA_RS12895 PF02899 Phage integrase, N-terminal SAM-like domain VAA_RS12940 PF01527 Transposase VAA_RS13000 PF13503 Domain of unknown function (DUF4123) VAA_RS13005 PF04717 Type VI secretion system, phage-baseplate injector VAA_RS13010 PF05638 Type VI secretion system effector, Hcp VAA_RS13015 PF00472 RF-1 domain VAA_RS13025 PF02368 Bacterial Ig-like domain (group 2) VAA_RS13025 PF11999 Protein of unknown function (DUF3494) VAA_RS13030 PF01380 SIS domain VAA_RS13035 PF00455 DeoR C terminal sensor domain VAA_RS13035 PF08220 DeoR-like helix-turn-helix domain VAA_RS13045 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS13045 PF17158 Membrane-associated sensor, integral membrane domain VAA_RS13055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS13055 PF03466 LysR substrate binding domain VAA_RS13060 PF01810 LysE type translocator VAA_RS13065 PF05552 Conserved TM helix VAA_RS13065 PF00924 Mechanosensitive ion channel VAA_RS13070 PF01116 Fructose-bisphosphate aldolase class-II VAA_RS13075 PF00162 Phosphoglycerate kinase VAA_RS13080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA_RS13080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAA_RS13085 PF00593 TonB dependent receptor VAA_RS13085 PF07715 TonB-dependent Receptor Plug Domain VAA_RS13090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA_RS13090 PF03466 LysR substrate binding domain VAA_RS13100 PF02772 S-adenosylmethionine synthetase, central domain VAA_RS13100 PF02773 S-adenosylmethionine synthetase, C-terminal domain VAA_RS13100 PF00438 S-adenosylmethionine synthetase, N-terminal domain VAA_RS13105 PF10263 SprT-like family VAA_RS13105 PF17283 SprT-like zinc ribbon domain VAA_RS13110 PF04231 Endonuclease I VAA_RS13115 PF04452 RNA methyltransferase VAA_RS13120 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VAA_RS13120 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VAA_RS13125 PF02622 Uncharacterized ACR, COG1678 VAA_RS13130 PF03652 Holliday junction resolvase VAA_RS13135 PF00437 Type II/IV secretion system protein VAA_RS13140 PF00437 Type II/IV secretion system protein VAA_RS13145 PF01168 Alanine racemase, N-terminal domain VAA_RS13150 PF03807 NADP oxidoreductase coenzyme F420-dependent VAA_RS13150 PF14748 Pyrroline-5-carboxylate reductase dimerisation VAA_RS13155 PF02325 YGGT family VAA_RS13160 PF02594 Uncharacterised ACR, YggU family COG1872 VAA_RS13170 PF01725 Ham1 family VAA_RS13175 PF04055 Radical SAM superfamily VAA_RS13175 PF06969 HemN C-terminal domain VAA_RS13180 PF04960 Glutaminase VAA_RS13185 PF02390 Putative methyltransferase VAA_RS13190 PF14815 NUDIX domain VAA_RS13190 PF00730 HhH-GPD superfamily base excision DNA repair protein VAA_RS13190 PF00633 Helix-hairpin-helix motif VAA_RS13195 PF04362 Bacterial Fe(2+) trafficking VAA_RS13200 PF01464 Transglycosylase SLT domain VAA_RS13200 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VAA_RS13260 PF09312 SurA N-terminal domain VAA_RS13265 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VAA_RS13270 PF00398 Ribosomal RNA adenine dimethylase VAA_RS13275 PF04379 ApaG domain VAA_RS13280 PF00149 Calcineurin-like phosphoesterase VAA_RS13285 PF00186 Dihydrofolate reductase VAA_RS13290 PF12821 Threonine/Serine exporter, ThrE VAA_RS13295 PF06738 Putative threonine/serine exporter VAA_RS13300 PF01018 GTP1/OBG VAA_RS13300 PF01926 50S ribosome-binding GTPase VAA_RS13305 PF01016 Ribosomal L27 protein VAA_RS13310 PF00829 Ribosomal prokaryotic L21 protein VAA_RS13315 PF00348 Polyprenyl synthetase VAA_RS13320 PF13520 Amino acid permease VAA_RS13330 PF02863 Arginine repressor, C-terminal domain VAA_RS13330 PF01316 Arginine repressor, DNA binding domain VAA_RS13340 PF16868 NMT1-like family VAA_RS13350 PF00582 Universal stress protein family VAA_RS13375 PF07804 HipA-like C-terminal domain VAA_RS13375 PF13657 HipA N-terminal domain VAA_RS13390 PF02384 N-6 DNA Methylase VAA_RS13400 PF18766 SWI2/SNF2 ATPase VAA_RS13400 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VAA_RS13400 PF11867 Domain of unknown function (DUF3387) VAA_RS13410 PF04245 37-kD nucleoid-associated bacterial protein VAA_RS13440 PF06877 Regulator of ribonuclease activity B VAA_RS13450 PF01523 Putative modulator of DNA gyrase VAA_RS13455 PF00795 Carbon-nitrogen hydrolase VAA_RS13460 PF13116 Protein of unknown function VAA_RS13460 PF13502 AsmA-like C-terminal region VAA_RS13465 PF00575 S1 RNA binding domain VAA_RS13465 PF10150 Ribonuclease E/G family VAA_RS13470 PF02545 Maf-like protein VAA_RS13475 PF04093 rod shape-determining protein MreD VAA_RS13480 PF04085 rod shape-determining protein MreC VAA_RS13520 PF07963 Prokaryotic N-terminal methylation motif VAA_RS13530 PF00482 Type II secretion system (T2SS), protein F VAA_RS13535 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VAA_RS13535 PF00437 Type II/IV secretion system protein VAA_RS13545 PF13401 AAA domain VAA_RS13545 PF01471 Putative peptidoglycan binding domain VAA_RS13550 PF00263 Bacterial type II and III secretion system protein VAA_RS13550 PF03958 Bacterial type II/III secretion system short domain VAA_RS13570 PF00563 EAL domain VAA_RS13570 PF17157 Gammaproteobacterial periplasmic sensor domain VAA_RS13570 PF00990 Diguanylate cyclase, GGDEF domain VAA_RS13575 PF00436 Single-strand binding protein family VAA_RS13580 PF00196 Bacterial regulatory proteins, luxR family VAA_RS13585 PF00483 Nucleotidyl transferase VAA_RS13590 PF00005 ABC transporter VAA_RS13590 PF17755 UvrA DNA-binding domain VAA_RS13590 PF17760 UvrA interaction domain VAA_RS13600 PF03448 MgtE intracellular N domain VAA_RS13600 PF01769 Divalent cation transporter VAA_RS13600 PF00571 CBS domain VAA_RS13615 PF00266 Aminotransferase class-V VAA_RS13620 PF01842 ACT domain VAA_RS13620 PF00696 Amino acid kinase family VAA_RS13625 PF02574 Homocysteine S-methyltransferase VAA_RS13625 PF00809 Pterin binding enzyme VAA_RS13625 PF02965 Vitamin B12 dependent methionine synthase, activation domain VAA_RS13625 PF02607 B12 binding domain VAA_RS13625 PF02310 B12 binding domain VAA_RS13630 PF00999 Sodium/hydrogen exchanger family VAA_RS13665 PF01507 Phosphoadenosine phosphosulfate reductase family VAA_RS13670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VAA_RS13670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VAA_RS13675 PF00667 FAD binding domain VAA_RS13675 PF00258 Flavodoxin VAA_RS13675 PF00175 Oxidoreductase NAD-binding domain VAA_RS13695 PF01207 Dihydrouridine synthase (Dus) VAA_RS13700 PF01475 Ferric uptake regulator family VAA_RS13710 PF00342 Phosphoglucose isomerase VAA_RS13715 PF01168 Alanine racemase, N-terminal domain VAA_RS13715 PF00842 Alanine racemase, C-terminal domain VAA_RS13720 PF03796 DnaB-like helicase C terminal domain VAA_RS13720 PF00772 DnaB-like helicase N terminal domain VAA_RS13730 PF03948 Ribosomal protein L9, C-terminal domain VAA_RS13730 PF01281 Ribosomal protein L9, N-terminal domain VAA_RS13735 PF01084 Ribosomal protein S18 VAA_RS13740 PF00436 Single-strand binding protein family VAA_RS13745 PF01250 Ribosomal protein S6 VAA_RS13750 PF03144 Elongation factor Tu domain 2 VAA_RS13750 PF03143 Elongation factor Tu C-terminal domain VAA_RS13750 PF00009 Elongation factor Tu GTP binding domain VAA_RS13755 PF03144 Elongation factor Tu domain 2 VAA_RS13755 PF00009 Elongation factor Tu GTP binding domain VAA_RS13755 PF03764 Elongation factor G, domain IV VAA_RS13755 PF00679 Elongation factor G C-terminus VAA_RS13755 PF14492 Elongation Factor G, domain II VAA_RS13760 PF00177 Ribosomal protein S7p/S5e VAA_RS13765 PF00164 Ribosomal protein S12/S23 VAA_RS13770 PF04077 DsrH like protein VAA_RS13775 PF02635 DsrE/DsrF-like family VAA_RS13780 PF02635 DsrE/DsrF-like family VAA_RS13785 PF13309 HTH domain VAA_RS13785 PF08348 YheO-like PAS domain VAA_RS13790 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAA_RS13790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA_RS13800 PF04102 SlyX VAA_RS13805 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VAA_RS13810 PF01145 SPFH domain / Band 7 family VAA_RS13815 PF01145 SPFH domain / Band 7 family VAA_RS13815 PF12221 Bacterial membrane protein N terminal VAA_RS13820 PF01926 50S ribosome-binding GTPase VAA_RS13820 PF16360 GTP-binding GTPase Middle Region VAA_RS13820 PF13167 GTP-binding GTPase N-terminal VAA_RS13825 PF17209 Hfq protein VAA_RS13835 PF08676 MutL C terminal dimerisation domain VAA_RS13835 PF01119 DNA mismatch repair protein, C-terminal domain VAA_RS13840 PF01520 N-acetylmuramoyl-L-alanine amidase VAA_RS13845 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VAA_RS13860 PF00929 Exonuclease VAA_RS13865 PF03193 RsgA GTPase VAA_RS13870 PF02666 Phosphatidylserine decarboxylase VAA_RS13875 PF02080 TrkA-C domain VAA_RS13875 PF03600 Citrate transporter VAA_RS13880 PF00672 HAMP domain VAA_RS13880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA_RS13880 PF02743 Cache domain VAA_RS13890 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VAA_RS13890 PF01676 Metalloenzyme superfamily VAA_RS13895 PF01551 Peptidase family M23 VAA_RS13905 PF00440 Bacterial regulatory proteins, tetR family VAA_RS13905 PF08360 QacR-like protein, C-terminal region VAA_RS13910 PF01208 Uroporphyrinogen decarboxylase (URO-D) VAA_RS13915 PF00293 NUDIX domain VAA_RS13915 PF09297 NADH pyrophosphatase zinc ribbon domain VAA_RS13920 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VAA_RS13925 PF04998 RNA polymerase Rpb1, domain 5 VAA_RS13925 PF05000 RNA polymerase Rpb1, domain 4 VAA_RS13925 PF00623 RNA polymerase Rpb1, domain 2 VAA_RS13925 PF04983 RNA polymerase Rpb1, domain 3 VAA_RS13925 PF04997 RNA polymerase Rpb1, domain 1 VAA_RS13930 PF04563 RNA polymerase beta subunit VAA_RS13930 PF10385 RNA polymerase beta subunit external 1 domain VAA_RS13930 PF04565 RNA polymerase Rpb2, domain 3 VAA_RS13930 PF04561 RNA polymerase Rpb2, domain 2 VAA_RS13930 PF04560 RNA polymerase Rpb2, domain 7 VAA_RS13930 PF00562 RNA polymerase Rpb2, domain 6 VAA_RS13935 PF00542 Ribosomal protein L7/L12 C-terminal domain VAA_RS13935 PF16320 Ribosomal protein L7/L12 dimerisation domain VAA_RS13940 PF00466 Ribosomal protein L10 VAA_RS13945 PF00687 Ribosomal protein L1p/L10e family VAA_RS13950 PF03946 Ribosomal protein L11, N-terminal domain VAA_RS13950 PF00298 Ribosomal protein L11, RNA binding domain VAA_RS13955 PF02357 Transcription termination factor nusG VAA_RS13955 PF00467 KOW motif VAA_RS13960 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VAA_RS13965 PF03144 Elongation factor Tu domain 2 VAA_RS13965 PF03143 Elongation factor Tu C-terminal domain VAA_RS13965 PF00009 Elongation factor Tu GTP binding domain VAA_RS13990 PF00485 Phosphoribulokinase / Uridine kinase family VAA_RS13995 PF02237 Biotin protein ligase C terminal domain VAA_RS13995 PF03099 Biotin/lipoate A/B protein ligase family VAA_RS13995 PF08279 HTH domain VAA_RS14000 PF01565 FAD binding domain VAA_RS14000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VAA_RS14010 PF13091 PLD-like domain VAA_RS14090 PF00271 Helicase conserved C-terminal domain VAA_RS14090 PF00270 DEAD/DEAH box helicase VAA_RS14120 PF02824 TGS domain VAA_RS14120 PF04607 Region found in RelA / SpoT proteins VAA_RS14120 PF13291 ACT domain VAA_RS14285 PF03934 Type II secretion system (T2SS), protein K VAA_RS14315 PF00263 Bacterial type II and III secretion system protein VAA_RS14315 PF03958 Bacterial type II/III secretion system short domain VAA_RS14450 PF00593 TonB dependent receptor VAA_RS14450 PF07715 TonB-dependent Receptor Plug Domain VAA_RS14570 PF00440 Bacterial regulatory proteins, tetR family VAA_RS14615 PF04545 Sigma-70, region 4 VAA_RS14615 PF04542 Sigma-70 region 2 VAA_RS14615 PF00140 Sigma-70 factor, region 1.2 VAA_RS14980 PF00920 Dehydratase family VAA_RS15070 PF02096 60Kd inner membrane protein VAA_RS15070 PF14849 YidC periplasmic domain VAA_RS15215 PF13667 ThiC-associated domain VAA_RS15215 PF01964 Radical SAM ThiC family VAA_RS15220 PF01964 Radical SAM ThiC family VAA_RS15220 PF13667 ThiC-associated domain VAA_RS15420 PF01926 50S ribosome-binding GTPase VAA_RS15455 PF00873 AcrB/AcrD/AcrF family VAA_RS15585 PF07693 KAP family P-loop domain VAA_RS15685 PF09382 RQC domain VAA_RS15685 PF16124 RecQ zinc-binding VAA_RS15685 PF00570 HRDC domain VAA_RS15685 PF00271 Helicase conserved C-terminal domain VAA_RS15685 PF00270 DEAD/DEAH box helicase VAA_RS15710 PF01380 SIS domain VAA_RS15775 PF00675 Insulinase (Peptidase family M16) VAA_RS15775 PF05193 Peptidase M16 inactive domain VAA_RS15955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAA_RS16250 PF13193 AMP-binding enzyme C-terminal domain VAA_RS16250 PF16177 Acetyl-coenzyme A synthetase N-terminus VAA_RS16250 PF00501 AMP-binding enzyme VAA_RS16275 PF00512 His Kinase A (phospho-acceptor) domain VAA_RS16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA_RS16275 PF00989 PAS fold VAA_RS16340 PF03606 C4-dicarboxylate anaerobic carrier VAA_RS16485 PF01554 MatE VAA_RS16510 PF00118 TCP-1/cpn60 chaperonin family VAA_RS16640 PF17092 Penicillin-binding protein OB-like domain VAA_RS16640 PF00905 Penicillin binding protein transpeptidase domain VAA_RS16640 PF00912 Transglycosylase VAA_RS16965 PF01625 Peptide methionine sulfoxide reductase VAA_RS17665 PF01493 GXGXG motif VAA_RS17665 PF01645 Conserved region in glutamate synthase VAA_RS17665 PF04898 Glutamate synthase central domain VAA_RS17665 PF00310 Glutamine amidotransferases class-II VAA_RS17670 PF04898 Glutamate synthase central domain VAA_RS17670 PF01645 Conserved region in glutamate synthase VAA_RS17670 PF01493 GXGXG motif VAA_RS17670 PF00310 Glutamine amidotransferases class-II VAA_RS17725 PF00742 Homoserine dehydrogenase VAA_RS17725 PF13840 ACT domain VAA_RS17725 PF00696 Amino acid kinase family VAA_RS17725 PF01842 ACT domain VAA_RS17725 PF03447 Homoserine dehydrogenase, NAD binding domain VAA_RS17800 PF18073 Rubredoxin metal binding domain VAA_RS17880 PF08544 GHMP kinases C terminal VAA_RS17880 PF00288 GHMP kinases N terminal domain VAA_RS17880 PF10509 Galactokinase galactose-binding signature VAA_RS18070 PF04205 FMN-binding domain VAA_RS18215 PF00885 6,7-dimethyl-8-ribityllumazine synthase VAA_RS18220 PF01029 NusB family VAA_RS18235 PF01842 ACT domain VAA_RS18235 PF01909 Nucleotidyltransferase domain VAA_RS18235 PF01966 HD domain VAA_RS18235 PF08335 GlnD PII-uridylyltransferase VAA_RS18285 PF17820 PDZ domain VAA_RS18285 PF02163 Peptidase family M50 VAA_RS18345 PF01420 Type I restriction modification DNA specificity domain