VAA_RS00025 SM00357 Cold shock protein domain VAA_RS00025 SM00382 ATPases associated with a variety of cellular activities VAA_RS00025 SM00959 Rho termination factor, N-terminal domain VAA_RS00035 SM00487 DEAD-like helicases superfamily VAA_RS00035 SM00490 helicase superfamily c-terminal domain VAA_RS00050 SM00072 Guanylate kinase homologues. VAA_RS00055 SM01409 VAA_RS00055 VAA_RS00060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAA_RS00060 SM00954 Region found in RelA / SpoT proteins VAA_RS00065 SM00487 DEAD-like helicases superfamily VAA_RS00065 SM00490 helicase superfamily c-terminal domain VAA_RS00075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS00075 SM00387 Histidine kinase-like ATPases VAA_RS00075 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS00080 SM00448 cheY-homologous receiver domain VAA_RS00080 SM00862 Transcriptional regulatory protein, C terminal VAA_RS00085 SM00495 Chitin-binding domain type 3 VAA_RS00130 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS00130 SM00732 Likely ribonuclease with RNase H fold. VAA_RS00210 SM00382 ATPases associated with a variety of cellular activities VAA_RS00225 SM00363 S4 RNA-binding domain VAA_RS00265 SM01230 VAA_RS00265 VAA_RS00275 SM00091 PAS domain VAA_RS00275 SM00387 Histidine kinase-like ATPases VAA_RS00275 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS00280 SM00382 ATPases associated with a variety of cellular activities VAA_RS00280 SM00448 cheY-homologous receiver domain VAA_RS00285 SM00052 Putative diguanylate phosphodiesterase VAA_RS00285 SM00267 diguanylate cyclase VAA_RS00285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS00325 SM00360 RNA recognition motif VAA_RS00365 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS00415 SM00857 Resolvase, N terminal domain VAA_RS00450 SM01038 Beta galactosidase small chain VAA_RS00485 SM00563 Phosphate acyltransferases VAA_RS00510 SM00450 Rhodanese Homology Domain VAA_RS00525 SM00382 ATPases associated with a variety of cellular activities VAA_RS00530 SM00382 ATPases associated with a variety of cellular activities VAA_RS00530 SM00962 SRP54-type protein, GTPase domain VAA_RS00530 SM00963 SRP54-type protein, helical bundle domain VAA_RS00615 SM00052 Putative diguanylate phosphodiesterase VAA_RS00640 SM01144 VAA_RS00640 VAA_RS00670 SM01219 VAA_RS00670 VAA_RS00755 SM01001 AIR carboxylase VAA_RS00780 SM00257 Lysin motif VAA_RS00840 SM00487 DEAD-like helicases superfamily VAA_RS00840 SM00491 VAA_RS00840 VAA_RS01005 SM00387 Histidine kinase-like ATPases VAA_RS01005 SM00433 TopoisomeraseII VAA_RS01015 SM00480 DNA polymerase III beta subunit VAA_RS01020 SM00382 ATPases associated with a variety of cellular activities VAA_RS01020 SM00760 Bacterial dnaA protein helix-turn-helix domain VAA_RS01025 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS01035 SM00382 ATPases associated with a variety of cellular activities VAA_RS01065 SM01228 VAA_RS01065 VAA_RS01080 SM00470 ParB-like nuclease domain VAA_RS01235 SM00876 Biotin and Thiamin Synthesis associated domain VAA_RS01265 SM00344 helix_turn_helix ASNC type VAA_RS01320 SM00382 ATPases associated with a variety of cellular activities VAA_RS01335 SM01007 Class II Aldolase and Adducin N-terminal domain VAA_RS01350 SM00342 helix_turn_helix, arabinose operon control protein VAA_RS01400 SM01004 Delta-aminolevulinic acid dehydratase VAA_RS01405 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VAA_RS01405 SM00474 3'-5' exonuclease VAA_RS01405 SM00475 5'-3' exonuclease VAA_RS01405 SM00482 DNA polymerase A domain VAA_RS01435 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS01510 SM00382 ATPases associated with a variety of cellular activities VAA_RS01540 SM00448 cheY-homologous receiver domain VAA_RS01555 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS01565 SM00487 DEAD-like helicases superfamily VAA_RS01695 SM00342 helix_turn_helix, arabinose operon control protein VAA_RS01705 SM00341 Helicase and RNase D C-terminal VAA_RS01705 SM00487 DEAD-like helicases superfamily VAA_RS01705 SM00490 helicase superfamily c-terminal domain VAA_RS01705 SM00956 VAA_RS01705 VAA_RS01735 SM00382 ATPases associated with a variety of cellular activities VAA_RS01745 SM00382 ATPases associated with a variety of cellular activities VAA_RS01775 SM00636 VAA_RS01775 VAA_RS01815 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS01845 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS01915 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VAA_RS01915 SM01232 VAA_RS01915 VAA_RS02025 SM00382 ATPases associated with a variety of cellular activities VAA_RS02170 SM00226 Low molecular weight phosphatase family VAA_RS02220 SM00984 UDP binding domain VAA_RS02230 SM00849 Metallo-beta-lactamase superfamily VAA_RS02230 SM01027 Beta-Casp domain VAA_RS02235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS02235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS02265 SM00411 bacterial (prokaryotic) histone like domain VAA_RS02275 SM01209 VAA_RS02275 VAA_RS02275 SM01210 VAA_RS02275 VAA_RS02285 SM00422 helix_turn_helix, mercury resistance VAA_RS02310 SM00878 Biotin carboxylase C-terminal domain VAA_RS02330 SM00479 VAA_RS02330 VAA_RS02345 SM00387 Histidine kinase-like ATPases VAA_RS02345 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS02345 SM00448 cheY-homologous receiver domain VAA_RS02360 SM01091 Transporter associated domain VAA_RS02365 SM00421 helix_turn_helix, Lux Regulon VAA_RS02365 SM00448 cheY-homologous receiver domain VAA_RS02430 SM00357 Cold shock protein domain VAA_RS02440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS02440 SM00387 Histidine kinase-like ATPases VAA_RS02440 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS02445 SM00448 cheY-homologous receiver domain VAA_RS02445 SM00862 Transcriptional regulatory protein, C terminal VAA_RS02495 SM00919 Malic enzyme, NAD binding domain VAA_RS02495 SM01274 VAA_RS02495 VAA_RS02505 SM00487 DEAD-like helicases superfamily VAA_RS02505 SM00490 helicase superfamily c-terminal domain VAA_RS02510 SM00354 helix_turn _helix lactose operon repressor VAA_RS02525 SM00382 ATPases associated with a variety of cellular activities VAA_RS02525 SM01086 C-terminal, D2-small domain, of ClpB protein VAA_RS02570 SM00883 Chaperonin 10 Kd subunit VAA_RS02595 SM00841 Elongation factor P, C-terminal VAA_RS02595 SM01185 VAA_RS02595 VAA_RS02625 SM00450 Rhodanese Homology Domain VAA_RS02640 SM00971 Serine acetyltransferase, N-terminal VAA_RS02660 SM00859 Semialdehyde dehydrogenase, NAD binding domain VAA_RS02725 SM00965 Secretin and TonB N terminus short domain VAA_RS02815 SM01150 VAA_RS02815 VAA_RS02820 SM00100 Cyclic nucleotide-monophosphate binding domain VAA_RS02820 SM00419 helix_turn_helix, cAMP Regulatory protein VAA_RS02845 SM00382 ATPases associated with a variety of cellular activities VAA_RS02875 SM00788 Adenylosuccinate synthetase VAA_RS02880 SM00671 Sel1-like repeats. VAA_RS02885 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS02885 SM00357 Cold shock protein domain VAA_RS02885 SM00955 VAA_RS02885 VAA_RS02895 SM01403 VAA_RS02895 VAA_RS02915 SM01382 VAA_RS02915 VAA_RS02915 SM01383 VAA_RS02915 VAA_RS02930 SM00322 K homology RNA-binding domain VAA_RS02950 SM01374 VAA_RS02950 VAA_RS02955 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VAA_RS03020 SM00363 S4 RNA-binding domain VAA_RS03020 SM01390 VAA_RS03020 VAA_RS03025 SM00662 RNA polymerases D VAA_RS03050 SM00487 DEAD-like helicases superfamily VAA_RS03050 SM00490 helicase superfamily c-terminal domain VAA_RS03055 SM00563 Phosphate acyltransferases VAA_RS03130 SM00382 ATPases associated with a variety of cellular activities VAA_RS03200 SM00382 ATPases associated with a variety of cellular activities VAA_RS03215 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS03215 SM00924 MgtE intracellular N domain VAA_RS03245 SM00382 ATPases associated with a variety of cellular activities VAA_RS03265 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS03275 SM00382 ATPases associated with a variety of cellular activities VAA_RS03310 SM00563 Phosphate acyltransferases VAA_RS03315 SM00387 Histidine kinase-like ATPases VAA_RS03320 SM00989 VAA_RS03320 VAA_RS03345 SM00670 Large family of predicted nucleotide-binding domains VAA_RS03355 SM00487 DEAD-like helicases superfamily VAA_RS03355 SM00490 helicase superfamily c-terminal domain VAA_RS03435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAA_RS03500 SM01329 VAA_RS03500 VAA_RS03505 SM00917 LeuA allosteric (dimerisation) domain VAA_RS03510 SM00014 Acid phosphatase homologues VAA_RS03635 SM00358 Double-stranded RNA binding motif VAA_RS03635 SM00535 Ribonuclease III family VAA_RS03670 SM00954 Region found in RelA / SpoT proteins VAA_RS03685 SM01192 VAA_RS03685 VAA_RS03685 SM01193 VAA_RS03685 VAA_RS03695 SM00382 ATPases associated with a variety of cellular activities VAA_RS03705 SM00287 Bacterial SH3 domain homologues VAA_RS03720 SM00880 VAA_RS03720 VAA_RS03720 SM01118 VAA_RS03720 VAA_RS03730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS03770 SM00387 Histidine kinase-like ATPases VAA_RS03770 SM00433 TopoisomeraseII VAA_RS03775 SM00434 DNA Topoisomerase IV VAA_RS03780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAA_RS03785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAA_RS03840 SM00749 bacterial OsmY and nodulation domain VAA_RS03920 SM00842 Cell division protein FtsA VAA_RS03925 SM00864 Tubulin/FtsZ family, GTPase domain VAA_RS03925 SM00865 Tubulin/FtsZ family, C-terminal domain VAA_RS03940 SM00957 SecA DEAD-like domain VAA_RS03940 SM00958 SecA preprotein cross-linking domain VAA_RS03955 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VAA_RS03960 SM00851 MGS-like domain VAA_RS03960 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VAA_RS04020 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS04025 SM00073 Histidine Phosphotransfer domain VAA_RS04025 SM00091 PAS domain VAA_RS04025 SM00387 Histidine kinase-like ATPases VAA_RS04025 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS04025 SM00448 cheY-homologous receiver domain VAA_RS04035 SM00448 cheY-homologous receiver domain VAA_RS04035 SM00862 Transcriptional regulatory protein, C terminal VAA_RS04070 SM00518 AP endonuclease family 2 VAA_RS04075 SM00986 Uracil DNA glycosylase superfamily VAA_RS04075 SM00987 UreE urease accessory protein, C-terminal domain VAA_RS04110 SM01133 VAA_RS04110 VAA_RS04115 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VAA_RS04145 SM00382 ATPases associated with a variety of cellular activities VAA_RS04195 SM00354 helix_turn _helix lactose operon repressor VAA_RS04275 SM00925 MltA specific insert domain VAA_RS04310 SM00464 Found in ATP-dependent protease La (LON) VAA_RS04360 SM00900 VAA_RS04360 VAA_RS04405 SM00267 diguanylate cyclase VAA_RS04455 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VAA_RS04510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAA_RS04555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAA_RS04565 SM00935 Outer membrane protein (OmpH-like) VAA_RS04595 SM00481 DNA polymerase alpha chain like domain VAA_RS04605 SM00977 TilS substrate C-terminal domain VAA_RS04615 SM00938 Nitrogen regulatory protein P-II VAA_RS04630 SM00257 Lysin motif VAA_RS04635 SM00849 Metallo-beta-lactamase superfamily VAA_RS04650 SM00479 VAA_RS04650 VAA_RS04690 SM00363 S4 RNA-binding domain VAA_RS04705 SM01081 Putative carbohydrate binding domain VAA_RS04765 SM00858 VAA_RS04765 VAA_RS04770 SM00260 Two component signalling adaptor domain VAA_RS04770 SM00448 cheY-homologous receiver domain VAA_RS04775 SM00138 Methyltransferase, chemotaxis proteins VAA_RS04820 SM00047 Lysozyme subfamily 2 VAA_RS04925 SM01400 VAA_RS04925 VAA_RS04945 SM00937 VAA_RS04945 VAA_RS05020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS05020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS05035 SM01130 VAA_RS05035 VAA_RS05125 SM00382 ATPases associated with a variety of cellular activities VAA_RS05130 SM00091 PAS domain VAA_RS05130 SM00387 Histidine kinase-like ATPases VAA_RS05130 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS05135 SM00382 ATPases associated with a variety of cellular activities VAA_RS05135 SM00448 cheY-homologous receiver domain VAA_RS05160 SM00382 ATPases associated with a variety of cellular activities VAA_RS05215 SM00463 Small MutS-related domain VAA_RS05255 SM00825 Beta-ketoacyl synthase VAA_RS05265 SM00859 Semialdehyde dehydrogenase, NAD binding domain VAA_RS05355 SM00861 Transketolase, pyrimidine binding domain VAA_RS05370 SM00881 CoA binding domain VAA_RS05380 SM00382 ATPases associated with a variety of cellular activities VAA_RS05390 SM00342 helix_turn_helix, arabinose operon control protein VAA_RS05395 SM00899 VAA_RS05395 VAA_RS05415 SM00836 DALR anticodon binding domain VAA_RS05415 SM01016 Arginyl tRNA synthetase N terminal dom VAA_RS05430 SM00855 Phosphoglycerate mutase family VAA_RS05440 SM00382 ATPases associated with a variety of cellular activities VAA_RS05440 SM00962 SRP54-type protein, GTPase domain VAA_RS05455 SM00448 cheY-homologous receiver domain VAA_RS05465 SM00073 Histidine Phosphotransfer domain VAA_RS05465 SM00260 Two component signalling adaptor domain VAA_RS05465 SM00387 Histidine kinase-like ATPases VAA_RS05465 SM01231 VAA_RS05465 VAA_RS05470 SM00448 cheY-homologous receiver domain VAA_RS05480 SM00260 Two component signalling adaptor domain VAA_RS05485 SM00260 Two component signalling adaptor domain VAA_RS05495 SM00382 ATPases associated with a variety of cellular activities VAA_RS05565 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VAA_RS05565 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VAA_RS05565 SM00493 VAA_RS05565 VAA_RS05620 SM00859 Semialdehyde dehydrogenase, NAD binding domain VAA_RS05640 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS05645 SM00363 S4 RNA-binding domain VAA_RS05675 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VAA_RS05680 SM00822 VAA_RS05680 VAA_RS05690 SM00825 Beta-ketoacyl synthase VAA_RS05755 SM00260 Two component signalling adaptor domain VAA_RS05755 SM00448 cheY-homologous receiver domain VAA_RS05775 SM01144 VAA_RS05775 VAA_RS05780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAA_RS05785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAA_RS05815 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VAA_RS05840 SM00563 Phosphate acyltransferases VAA_RS05850 SM00978 VAA_RS05850 VAA_RS05860 SM00344 helix_turn_helix ASNC type VAA_RS05885 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS05885 SM00267 diguanylate cyclase VAA_RS05910 SM01236 VAA_RS05910 VAA_RS05925 SM00448 cheY-homologous receiver domain VAA_RS05925 SM00862 Transcriptional regulatory protein, C terminal VAA_RS05930 SM00387 Histidine kinase-like ATPases VAA_RS05930 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS05940 SM00344 helix_turn_helix ASNC type VAA_RS05955 SM00448 cheY-homologous receiver domain VAA_RS05955 SM00862 Transcriptional regulatory protein, C terminal VAA_RS05960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS05960 SM00387 Histidine kinase-like ATPases VAA_RS05960 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS05975 SM00354 helix_turn _helix lactose operon repressor VAA_RS06015 SM00825 Beta-ketoacyl synthase VAA_RS06020 SM00822 VAA_RS06020 VAA_RS06030 SM00825 Beta-ketoacyl synthase VAA_RS06090 SM00563 Phosphate acyltransferases VAA_RS06110 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS06110 SM00387 Histidine kinase-like ATPases VAA_RS06110 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS06110 SM00448 cheY-homologous receiver domain VAA_RS06115 SM00052 Putative diguanylate phosphodiesterase VAA_RS06115 SM00421 helix_turn_helix, Lux Regulon VAA_RS06115 SM00448 cheY-homologous receiver domain VAA_RS06135 SM00382 ATPases associated with a variety of cellular activities VAA_RS06140 SM00382 ATPases associated with a variety of cellular activities VAA_RS06175 SM00382 ATPases associated with a variety of cellular activities VAA_RS06195 SM00382 ATPases associated with a variety of cellular activities VAA_RS06210 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS06210 SM00876 Biotin and Thiamin Synthesis associated domain VAA_RS06240 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAA_RS06250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS06250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS06300 SM00487 DEAD-like helicases superfamily VAA_RS06300 SM00490 helicase superfamily c-terminal domain VAA_RS06300 SM00982 VAA_RS06300 VAA_RS06300 SM01058 CarD-like/TRCF domain VAA_RS06315 SM00382 ATPases associated with a variety of cellular activities VAA_RS06330 SM00849 Metallo-beta-lactamase superfamily VAA_RS06335 SM00382 ATPases associated with a variety of cellular activities VAA_RS06370 SM00763 PrkA AAA domain VAA_RS06390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS06390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS06415 SM00382 ATPases associated with a variety of cellular activities VAA_RS06420 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS06420 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VAA_RS06440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS06440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS06460 SM00491 VAA_RS06460 VAA_RS06475 SM00052 Putative diguanylate phosphodiesterase VAA_RS06490 SM00840 VAA_RS06490 VAA_RS06500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VAA_RS06505 SM00382 ATPases associated with a variety of cellular activities VAA_RS06560 SM00028 Tetratricopeptide repeats VAA_RS06590 SM00387 Histidine kinase-like ATPases VAA_RS06590 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS06590 SM00448 cheY-homologous receiver domain VAA_RS06630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAA_RS06640 SM00267 diguanylate cyclase VAA_RS06685 SM00671 Sel1-like repeats. VAA_RS06735 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAA_RS06735 SM00866 VAA_RS06735 VAA_RS06750 SM00841 Elongation factor P, C-terminal VAA_RS06750 SM01185 VAA_RS06750 VAA_RS06760 SM00486 DNA polymerase type-B family VAA_RS06765 SM00421 helix_turn_helix, Lux Regulon VAA_RS06765 SM00448 cheY-homologous receiver domain VAA_RS06770 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VAA_RS06770 SM00465 GIY-YIG type nucleases (URI domain) VAA_RS06815 SM00873 B3/4 domain VAA_RS06815 SM00874 tRNA synthetase B5 domain VAA_RS06815 SM00896 Ferredoxin-fold anticodon binding domain VAA_RS06820 SM00411 bacterial (prokaryotic) histone like domain VAA_RS06835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VAA_RS06835 SM00091 PAS domain VAA_RS06835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS06845 SM00052 Putative diguanylate phosphodiesterase VAA_RS06845 SM00267 diguanylate cyclase VAA_RS06865 SM00479 VAA_RS06865 VAA_RS06880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS06880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS06885 SM00382 ATPases associated with a variety of cellular activities VAA_RS06895 SM00382 ATPases associated with a variety of cellular activities VAA_RS06930 SM00855 Phosphoglycerate mutase family VAA_RS06945 SM00382 ATPases associated with a variety of cellular activities VAA_RS06990 SM00028 Tetratricopeptide repeats VAA_RS07030 SM00387 Histidine kinase-like ATPases VAA_RS07035 SM00448 cheY-homologous receiver domain VAA_RS07040 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS07045 SM00260 Two component signalling adaptor domain VAA_RS07045 SM00448 cheY-homologous receiver domain VAA_RS07050 SM00642 Alpha-amylase domain VAA_RS07060 SM00267 diguanylate cyclase VAA_RS07075 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS07155 SM00382 ATPases associated with a variety of cellular activities VAA_RS07155 SM01086 C-terminal, D2-small domain, of ClpB protein VAA_RS07180 SM00240 Forkhead associated domain VAA_RS07205 SM00220 Serine/Threonine protein kinases, catalytic domain VAA_RS07235 SM00862 Transcriptional regulatory protein, C terminal VAA_RS07245 SM00342 helix_turn_helix, arabinose operon control protein VAA_RS07325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS07325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS07340 SM00052 Putative diguanylate phosphodiesterase VAA_RS07355 SM00354 helix_turn _helix lactose operon repressor VAA_RS07360 SM00640 Glycosyl hydrolases family 32 VAA_RS07365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS07365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS07370 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS07375 SM00450 Rhodanese Homology Domain VAA_RS07380 SM00382 ATPases associated with a variety of cellular activities VAA_RS07465 SM00849 Metallo-beta-lactamase superfamily VAA_RS07480 SM00347 helix_turn_helix multiple antibiotic resistance protein VAA_RS07490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS07490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS07495 SM00479 VAA_RS07495 VAA_RS07500 SM00100 Cyclic nucleotide-monophosphate binding domain VAA_RS07500 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS07510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VAA_RS07515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS07520 SM00448 cheY-homologous receiver domain VAA_RS07530 SM00073 Histidine Phosphotransfer domain VAA_RS07530 SM00260 Two component signalling adaptor domain VAA_RS07530 SM00387 Histidine kinase-like ATPases VAA_RS07530 SM01231 VAA_RS07530 VAA_RS07535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS07535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS07540 SM00260 Two component signalling adaptor domain VAA_RS07545 SM00138 Methyltransferase, chemotaxis proteins VAA_RS07555 SM00448 cheY-homologous receiver domain VAA_RS07570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS07570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS07625 SM00091 PAS domain VAA_RS07625 SM00382 ATPases associated with a variety of cellular activities VAA_RS07640 SM00267 diguanylate cyclase VAA_RS07650 SM01005 Alanine racemase, C-terminal domain VAA_RS07655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS07655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS07665 SM00387 Histidine kinase-like ATPases VAA_RS07670 SM00448 cheY-homologous receiver domain VAA_RS07675 SM00357 Cold shock protein domain VAA_RS07690 SM00487 DEAD-like helicases superfamily VAA_RS07690 SM00490 helicase superfamily c-terminal domain VAA_RS07700 SM00354 helix_turn _helix lactose operon repressor VAA_RS07745 SM00267 diguanylate cyclase VAA_RS07745 SM01079 VAA_RS07745 VAA_RS07750 SM00479 VAA_RS07750 VAA_RS07765 SM00382 ATPases associated with a variety of cellular activities VAA_RS07765 SM00487 DEAD-like helicases superfamily VAA_RS07765 SM00490 helicase superfamily c-terminal domain VAA_RS07765 SM00847 Helicase associated domain (HA2) Add an annotation VAA_RS07805 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS07810 SM00479 VAA_RS07810 VAA_RS07865 SM00857 Resolvase, N terminal domain VAA_RS07900 SM00487 DEAD-like helicases superfamily VAA_RS07900 SM00490 helicase superfamily c-terminal domain VAA_RS07995 SM00849 Metallo-beta-lactamase superfamily VAA_RS08065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS08075 SM01144 VAA_RS08075 VAA_RS08100 SM00382 ATPases associated with a variety of cellular activities VAA_RS08120 SM00387 Histidine kinase-like ATPases VAA_RS08125 SM00421 helix_turn_helix, Lux Regulon VAA_RS08125 SM00448 cheY-homologous receiver domain VAA_RS08130 SM00382 ATPases associated with a variety of cellular activities VAA_RS08165 SM00382 ATPases associated with a variety of cellular activities VAA_RS08195 SM00100 Cyclic nucleotide-monophosphate binding domain VAA_RS08195 SM00419 helix_turn_helix, cAMP Regulatory protein VAA_RS08285 SM00382 ATPases associated with a variety of cellular activities VAA_RS08295 SM00981 VAA_RS08295 VAA_RS08330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VAA_RS08330 SM00245 tail specific protease VAA_RS08335 SM00945 ProQ/FINO family VAA_RS08345 SM00382 ATPases associated with a variety of cellular activities VAA_RS08365 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS08405 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS08420 SM00382 ATPases associated with a variety of cellular activities VAA_RS08440 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VAA_RS08525 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAA_RS08525 SM00895 VAA_RS08525 VAA_RS08550 SM00448 cheY-homologous receiver domain VAA_RS08550 SM00862 Transcriptional regulatory protein, C terminal VAA_RS08555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS08555 SM00387 Histidine kinase-like ATPases VAA_RS08555 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS08580 SM00382 ATPases associated with a variety of cellular activities VAA_RS08620 SM00342 helix_turn_helix, arabinose operon control protein VAA_RS08675 SM00448 cheY-homologous receiver domain VAA_RS08680 SM00387 Histidine kinase-like ATPases VAA_RS08705 SM00764 Citrate lyase ligase C-terminal domain VAA_RS08725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS08740 SM00434 DNA Topoisomerase IV VAA_RS08770 SM00852 Probable molybdopterin binding domain VAA_RS08785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS08785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS08785 SM01049 VAA_RS08785 VAA_RS08825 SM00382 ATPases associated with a variety of cellular activities VAA_RS08850 SM00363 S4 RNA-binding domain VAA_RS08855 SM00487 DEAD-like helicases superfamily VAA_RS08855 SM00490 helicase superfamily c-terminal domain VAA_RS08865 SM00448 cheY-homologous receiver domain VAA_RS08865 SM00862 Transcriptional regulatory protein, C terminal VAA_RS08870 SM00387 Histidine kinase-like ATPases VAA_RS08930 SM00155 Phospholipase D. Active site motifs. VAA_RS08960 SM00382 ATPases associated with a variety of cellular activities VAA_RS08980 SM00382 ATPases associated with a variety of cellular activities VAA_RS08985 SM00382 ATPases associated with a variety of cellular activities VAA_RS09000 SM01131 VAA_RS09000 VAA_RS09125 SM00448 cheY-homologous receiver domain VAA_RS09125 SM00862 Transcriptional regulatory protein, C terminal VAA_RS09135 SM00354 helix_turn _helix lactose operon repressor VAA_RS09170 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VAA_RS09170 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VAA_RS09170 SM00493 VAA_RS09170 VAA_RS09195 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS09200 SM00382 ATPases associated with a variety of cellular activities VAA_RS09200 SM01086 C-terminal, D2-small domain, of ClpB protein VAA_RS09210 SM00357 Cold shock protein domain VAA_RS09270 SM00528 Domain in histone-like proteins of HNS family VAA_RS09310 SM00387 Histidine kinase-like ATPases VAA_RS09315 SM00448 cheY-homologous receiver domain VAA_RS09380 SM00919 Malic enzyme, NAD binding domain VAA_RS09380 SM01274 VAA_RS09380 VAA_RS09405 SM00267 diguanylate cyclase VAA_RS09415 SM00382 ATPases associated with a variety of cellular activities VAA_RS09420 SM00382 ATPases associated with a variety of cellular activities VAA_RS09445 SM00052 Putative diguanylate phosphodiesterase VAA_RS09445 SM00267 diguanylate cyclase VAA_RS09450 SM00363 S4 RNA-binding domain VAA_RS09555 SM00052 Putative diguanylate phosphodiesterase VAA_RS09555 SM00091 PAS domain VAA_RS09565 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS09615 SM00843 VAA_RS09615 VAA_RS09620 SM00344 helix_turn_helix ASNC type VAA_RS09625 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VAA_RS09625 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VAA_RS09645 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VAA_RS09650 SM00028 Tetratricopeptide repeats VAA_RS09660 SM00411 bacterial (prokaryotic) histone like domain VAA_RS09665 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS09685 SM00411 bacterial (prokaryotic) histone like domain VAA_RS09690 SM00382 ATPases associated with a variety of cellular activities VAA_RS09690 SM00464 Found in ATP-dependent protease La (LON) VAA_RS09695 SM00382 ATPases associated with a variety of cellular activities VAA_RS09695 SM00994 ClpX C4-type zinc finger VAA_RS09695 SM01086 C-terminal, D2-small domain, of ClpB protein VAA_RS09715 SM00387 Histidine kinase-like ATPases VAA_RS09715 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS09720 SM00382 ATPases associated with a variety of cellular activities VAA_RS09720 SM00448 cheY-homologous receiver domain VAA_RS09750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS09750 SM00387 Histidine kinase-like ATPases VAA_RS09755 SM00448 cheY-homologous receiver domain VAA_RS09755 SM00862 Transcriptional regulatory protein, C terminal VAA_RS09775 SM00487 DEAD-like helicases superfamily VAA_RS09775 SM00490 helicase superfamily c-terminal domain VAA_RS09780 SM00642 Alpha-amylase domain VAA_RS09820 SM00495 Chitin-binding domain type 3 VAA_RS09820 SM00636 VAA_RS09820 VAA_RS09860 SM00474 3'-5' exonuclease VAA_RS09890 SM00487 DEAD-like helicases superfamily VAA_RS09890 SM00491 VAA_RS09890 VAA_RS09915 SM00870 VAA_RS09915 VAA_RS09935 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA_RS09970 SM00493 VAA_RS09970 VAA_RS09980 SM00382 ATPases associated with a variety of cellular activities VAA_RS10000 SM00448 cheY-homologous receiver domain VAA_RS10085 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS10090 SM00267 diguanylate cyclase VAA_RS10110 SM00852 Probable molybdopterin binding domain VAA_RS10115 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS10130 SM00448 cheY-homologous receiver domain VAA_RS10135 SM00487 DEAD-like helicases superfamily VAA_RS10135 SM00490 helicase superfamily c-terminal domain VAA_RS10180 SM00823 Phosphopantetheine attachment site VAA_RS10180 SM00824 Thioesterase VAA_RS10195 SM00923 MbtH-like protein VAA_RS10235 SM00900 VAA_RS10235 VAA_RS10245 SM00478 endonuclease III VAA_RS10245 SM00525 VAA_RS10245 VAA_RS10260 SM00479 VAA_RS10260 VAA_RS10335 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VAA_RS10355 SM00387 Histidine kinase-like ATPases VAA_RS10360 SM00862 Transcriptional regulatory protein, C terminal VAA_RS10390 SM00244 prohibitin homologues VAA_RS10400 SM00422 helix_turn_helix, mercury resistance VAA_RS10420 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VAA_RS10420 SM00292 breast cancer carboxy-terminal domain VAA_RS10420 SM00532 Ligase N family VAA_RS10425 SM00771 ZipA, C-terminal domain (FtsZ-binding) VAA_RS10460 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS10475 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS10475 SM01091 Transporter associated domain VAA_RS10530 SM00936 Penicillin-binding protein 5, C-terminal domain VAA_RS10545 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS10650 SM00984 UDP binding domain VAA_RS10655 SM00984 UDP binding domain VAA_RS10665 SM00226 Low molecular weight phosphatase family VAA_RS10715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS10715 SM00387 Histidine kinase-like ATPases VAA_RS10715 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS10720 SM00448 cheY-homologous receiver domain VAA_RS10720 SM00862 Transcriptional regulatory protein, C terminal VAA_RS10735 SM00354 helix_turn _helix lactose operon repressor VAA_RS10750 SM00382 ATPases associated with a variety of cellular activities VAA_RS10750 SM00930 VAA_RS10750 VAA_RS10780 SM00028 Tetratricopeptide repeats VAA_RS10795 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VAA_RS10795 SM00475 5'-3' exonuclease VAA_RS10815 SM00981 VAA_RS10815 VAA_RS10840 SM00861 Transketolase, pyrimidine binding domain VAA_RS10925 SM01211 VAA_RS10925 VAA_RS10935 SM00062 Bacterial periplasmic substrate-binding proteins VAA_RS10950 SM00829 Enoylreductase VAA_RS11060 SM00382 ATPases associated with a variety of cellular activities VAA_RS11070 SM00487 DEAD-like helicases superfamily VAA_RS11135 SM00257 Lysin motif VAA_RS11210 SM00382 ATPases associated with a variety of cellular activities VAA_RS11275 SM00495 Chitin-binding domain type 3 VAA_RS11290 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS11290 SM01240 VAA_RS11290 VAA_RS11305 SM00382 ATPases associated with a variety of cellular activities VAA_RS11310 SM00564 beta-propeller repeat VAA_RS11340 SM00562 VAA_RS11340 VAA_RS11365 SM00271 DnaJ molecular chaperone homology domain VAA_RS11410 SM01323 VAA_RS11410 VAA_RS11425 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS11460 SM00382 ATPases associated with a variety of cellular activities VAA_RS11490 SM00091 PAS domain VAA_RS11490 SM00387 Histidine kinase-like ATPases VAA_RS11490 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS11495 SM00448 cheY-homologous receiver domain VAA_RS11495 SM00862 Transcriptional regulatory protein, C terminal VAA_RS11560 SM00382 ATPases associated with a variety of cellular activities VAA_RS11560 SM01086 C-terminal, D2-small domain, of ClpB protein VAA_RS11570 SM00363 S4 RNA-binding domain VAA_RS11585 SM00830 Chorismate mutase type II VAA_RS11595 SM00052 Putative diguanylate phosphodiesterase VAA_RS11595 SM00267 diguanylate cyclase VAA_RS11615 SM00382 ATPases associated with a variety of cellular activities VAA_RS11625 SM00830 Chorismate mutase type II VAA_RS11695 SM00904 Riboflavin kinase VAA_RS11710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VAA_RS11810 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS11890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VAA_RS11900 SM00927 DNA mismatch repair enzyme MutH VAA_RS11915 SM00382 ATPases associated with a variety of cellular activities VAA_RS11925 SM00937 VAA_RS11925 VAA_RS11940 SM00487 DEAD-like helicases superfamily VAA_RS11940 SM00490 helicase superfamily c-terminal domain VAA_RS11950 SM00052 Putative diguanylate phosphodiesterase VAA_RS11950 SM00267 diguanylate cyclase VAA_RS11975 SM00052 Putative diguanylate phosphodiesterase VAA_RS11975 SM00091 PAS domain VAA_RS11975 SM00267 diguanylate cyclase VAA_RS11995 SM00347 helix_turn_helix multiple antibiotic resistance protein VAA_RS12000 SM00028 Tetratricopeptide repeats VAA_RS12005 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS12005 SM00322 K homology RNA-binding domain VAA_RS12010 SM01387 VAA_RS12010 VAA_RS12030 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS12030 SM00322 K homology RNA-binding domain VAA_RS12065 SM00382 ATPases associated with a variety of cellular activities VAA_RS12075 SM01103 VAA_RS12075 VAA_RS12145 SM00091 PAS domain VAA_RS12145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS12145 SM00387 Histidine kinase-like ATPases VAA_RS12145 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS12145 SM00448 cheY-homologous receiver domain VAA_RS12165 SM00382 ATPases associated with a variety of cellular activities VAA_RS12170 SM00382 ATPases associated with a variety of cellular activities VAA_RS12190 SM01068 Putative carbohydrate binding domain VAA_RS12200 SM00382 ATPases associated with a variety of cellular activities VAA_RS12220 SM00938 Nitrogen regulatory protein P-II VAA_RS12260 SM00487 DEAD-like helicases superfamily VAA_RS12260 SM00490 helicase superfamily c-terminal domain VAA_RS12260 SM00847 Helicase associated domain (HA2) Add an annotation VAA_RS12310 SM00382 ATPases associated with a variety of cellular activities VAA_RS12320 SM00947 Carbonic anhydrase VAA_RS12350 SM00345 helix_turn_helix gluconate operon transcriptional repressor VAA_RS12350 SM00895 VAA_RS12350 VAA_RS12375 SM00644 VAA_RS12375 VAA_RS12440 SM00382 ATPases associated with a variety of cellular activities VAA_RS12440 SM00962 SRP54-type protein, GTPase domain VAA_RS12440 SM00963 SRP54-type protein, helical bundle domain VAA_RS12475 SM00829 Enoylreductase VAA_RS12540 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VAA_RS12550 SM00382 ATPases associated with a variety of cellular activities VAA_RS12560 SM00382 ATPases associated with a variety of cellular activities VAA_RS12585 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VAA_RS12585 SM00534 ATPase domain of DNA mismatch repair MUTS family VAA_RS12595 SM00257 Lysin motif VAA_RS12640 SM00905 Dihydroneopterin aldolase VAA_RS12645 SM01207 VAA_RS12645 VAA_RS12670 SM00400 zinc finger VAA_RS12670 SM00493 VAA_RS12670 VAA_RS12670 SM00766 DNA primase DnaG DnaB-binding VAA_RS12685 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS12760 SM00487 DEAD-like helicases superfamily VAA_RS12825 SM00857 Resolvase, N terminal domain VAA_RS12845 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS12865 SM00382 ATPases associated with a variety of cellular activities VAA_RS12920 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS12955 SM00482 DNA polymerase A domain VAA_RS12980 SM00886 Stress responsive A/B Barrel Domain VAA_RS13020 SM00563 Phosphate acyltransferases VAA_RS13025 SM00635 Bacterial Ig-like domain 2 VAA_RS13035 SM00420 helix_turn_helix, Deoxyribose operon repressor VAA_RS13035 SM01134 VAA_RS13035 VAA_RS13045 SM00267 diguanylate cyclase VAA_RS13080 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA_RS13105 SM00731 SprT homologues. VAA_RS13130 SM00732 Likely ribonuclease with RNase H fold. VAA_RS13160 SM01152 VAA_RS13160 VAA_RS13175 SM00729 Elongator protein 3, MiaB family, Radical SAM VAA_RS13190 SM00478 endonuclease III VAA_RS13190 SM00525 VAA_RS13190 VAA_RS13270 SM00650 Ribosomal RNA adenine dimethylases VAA_RS13385 SM00530 Helix-turn-helix XRE-family like proteins VAA_RS13400 SM00487 DEAD-like helicases superfamily VAA_RS13465 SM00316 Ribosomal protein S1-like RNA-binding domain VAA_RS13490 SM00560 LamG-like jellyroll fold domain VAA_RS13535 SM00382 ATPases associated with a variety of cellular activities VAA_RS13540 SM00028 Tetratricopeptide repeats VAA_RS13550 SM00965 Secretin and TonB N terminus short domain VAA_RS13570 SM00052 Putative diguanylate phosphodiesterase VAA_RS13570 SM00267 diguanylate cyclase VAA_RS13580 SM00421 helix_turn_helix, Lux Regulon VAA_RS13600 SM00116 Domain in cystathionine beta-synthase and other proteins. VAA_RS13600 SM00924 MgtE intracellular N domain VAA_RS13625 SM01018 B12 binding domain VAA_RS13715 SM01005 Alanine racemase, C-terminal domain VAA_RS13720 SM00382 ATPases associated with a variety of cellular activities VAA_RS13755 SM00838 Elongation factor G C-terminus VAA_RS13755 SM00889 Elongation factor G, domain IV VAA_RS13795 SM00320 WD40 repeats VAA_RS13810 SM00244 prohibitin homologues VAA_RS13815 SM00244 prohibitin homologues VAA_RS13835 SM00853 MutL C terminal dimerisation domain VAA_RS13835 SM01340 VAA_RS13835 VAA_RS13840 SM00257 Lysin motif VAA_RS13840 SM00646 VAA_RS13840 VAA_RS13860 SM00479 VAA_RS13860 VAA_RS13880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VAA_RS13880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VAA_RS13925 SM00663 RNA polymerase I subunit A N-terminus VAA_RS13950 SM00649 Ribosomal protein L11/L12 VAA_RS13955 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VAA_RS13955 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VAA_RS14010 SM00155 Phospholipase D. Active site motifs. VAA_RS14090 SM00490 helicase superfamily c-terminal domain VAA_RS15685 SM00487 DEAD-like helicases superfamily VAA_RS15685 SM00490 helicase superfamily c-terminal domain VAA_RS16275 SM00388 His Kinase A (phosphoacceptor) domain VAA_RS16755 SM01150 VAA_RS16755 VAA_RS17800 SM00382 ATPases associated with a variety of cellular activities