locus-tag class description CEA93_RS00005 PF00258 Flavodoxin CEA93_RS00010 PF01926 50S ribosome-binding GTPase CEA93_RS00010 PF10396 GTP-binding protein TrmE N-terminus CEA93_RS00010 PF12631 MnmE helical domain CEA93_RS00015 PF02096 60Kd inner membrane protein CEA93_RS00015 PF14849 YidC periplasmic domain CEA93_RS00020 PF01809 Putative membrane protein insertion efficiency factor CEA93_RS00025 PF00825 Ribonuclease P CEA93_RS00030 PF00468 Ribosomal protein L34 CEA93_RS00035 PF00005 ABC transporter CEA93_RS00040 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS00045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS00050 PF00308 Bacterial dnaA protein CEA93_RS00050 PF11638 DnaA N-terminal domain CEA93_RS00050 PF08299 Bacterial dnaA protein helix-turn-helix CEA93_RS00055 PF02767 DNA polymerase III beta subunit, central domain CEA93_RS00055 PF02768 DNA polymerase III beta subunit, C-terminal domain CEA93_RS00055 PF00712 DNA polymerase III beta subunit, N-terminal domain CEA93_RS00060 PF02463 RecF/RecN/SMC N terminal domain CEA93_RS00065 PF00204 DNA gyrase B CEA93_RS00065 PF00986 DNA gyrase B subunit, carboxyl terminus CEA93_RS00065 PF18053 DNA gyrase B subunit insert domain CEA93_RS00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS00065 PF01751 Toprim domain CEA93_RS00080 PF00011 Hsp20/alpha crystallin family CEA93_RS00085 PF00155 Aminotransferase class I and II CEA93_RS00090 PF05746 DALR anticodon binding domain CEA93_RS00090 PF02092 Glycyl-tRNA synthetase beta subunit CEA93_RS00095 PF02091 Glycyl-tRNA synthetase alpha subunit CEA93_RS00100 PF01169 Uncharacterized protein family UPF0016 CEA93_RS00110 PF01206 Sulfurtransferase TusA CEA93_RS00120 PF03466 LysR substrate binding domain CEA93_RS00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain CEA93_RS00125 PF00107 Zinc-binding dehydrogenase CEA93_RS00130 PF00585 C-terminal regulatory domain of Threonine dehydratase CEA93_RS00130 PF00291 Pyridoxal-phosphate dependent enzyme CEA93_RS00135 PF00920 Dehydratase family CEA93_RS00140 PF01063 Amino-transferase class IV CEA93_RS00150 PF00205 Thiamine pyrophosphate enzyme, central domain CEA93_RS00150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEA93_RS00150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEA93_RS00155 PF01078 Magnesium chelatase, subunit ChlI CEA93_RS00155 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEA93_RS00230 PF03050 Transposase IS66 family CEA93_RS00230 PF13007 Transposase C of IS166 homeodomain CEA93_RS00230 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS00230 PF13817 IS66 C-terminal element CEA93_RS00240 PF01078 Magnesium chelatase, subunit ChlI CEA93_RS00240 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEA93_RS00250 PF01323 DSBA-like thioredoxin domain CEA93_RS00255 PF01636 Phosphotransferase enzyme family CEA93_RS00260 PF13746 4Fe-4S dicluster domain CEA93_RS00260 PF12801 4Fe-4S binding domain CEA93_RS00260 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CEA93_RS00270 PF06288 Protein of unknown function (DUF1040) CEA93_RS00280 PF03006 Haemolysin-III related CEA93_RS00290 PF02386 Cation transport protein CEA93_RS00295 PF02080 TrkA-C domain CEA93_RS00295 PF02254 TrkA-N domain CEA93_RS00300 PF01189 16S rRNA methyltransferase RsmB/F CEA93_RS00300 PF01029 NusB family CEA93_RS00305 PF00551 Formyl transferase CEA93_RS00305 PF02911 Formyl transferase, C-terminal domain CEA93_RS00310 PF01327 Polypeptide deformylase CEA93_RS00315 PF01476 LysM domain CEA93_RS00320 PF17782 DprA winged helix domain CEA93_RS00320 PF02481 DNA recombination-mediator protein A CEA93_RS00325 PF04361 Protein of unknown function (DUF494) CEA93_RS00330 PF01396 Topoisomerase DNA binding C4 zinc finger CEA93_RS00335 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CEA93_RS00335 PF02222 ATP-grasp domain CEA93_RS00340 PF00731 AIR carboxylase CEA93_RS00345 PF01300 Telomere recombination CEA93_RS00350 PF01218 Coproporphyrinogen III oxidase CEA93_RS00355 PF08501 Shikimate dehydrogenase substrate binding domain CEA93_RS00355 PF01488 Shikimate / quinate 5-dehydrogenase CEA93_RS00355 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEA93_RS00360 PF07369 Protein of unknown function (DUF1488) CEA93_RS00365 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS00400 PF07219 HemY protein N-terminus CEA93_RS00405 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CEA93_RS00410 PF02602 Uroporphyrinogen-III synthase HemD CEA93_RS00415 PF03900 Porphobilinogen deaminase, C-terminal domain CEA93_RS00415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CEA93_RS00420 PF12633 Adenylate cyclase NT domain CEA93_RS00420 PF01295 Adenylate cyclase, class-I CEA93_RS00425 PF01491 Frataxin-like domain CEA93_RS00435 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEA93_RS00435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEA93_RS00440 PF01678 Diaminopimelate epimerase CEA93_RS00450 PF00589 Phage integrase family CEA93_RS00450 PF02899 Phage integrase, N-terminal SAM-like domain CEA93_RS00455 PF13419 Haloacid dehalogenase-like hydrolase CEA93_RS00460 PF03942 DTW domain CEA93_RS00475 PF12146 Serine aminopeptidase, S33 CEA93_RS00480 PF01810 LysE type translocator CEA93_RS00485 PF08668 HDOD domain CEA93_RS00485 PF00563 EAL domain CEA93_RS00490 PF00210 Ferritin-like domain CEA93_RS00520 PF01914 MarC family integral membrane protein CEA93_RS00530 PF13007 Transposase C of IS166 homeodomain CEA93_RS00530 PF13817 IS66 C-terminal element CEA93_RS00530 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS00530 PF03050 Transposase IS66 family CEA93_RS00555 PF13737 Transposase DDE domain CEA93_RS00565 PF01914 MarC family integral membrane protein CEA93_RS00580 PF00448 SRP54-type protein, GTPase domain CEA93_RS00580 PF02881 SRP54-type protein, helical bundle domain CEA93_RS00585 PF00005 ABC transporter CEA93_RS00590 PF18075 FtsX extracellular domain CEA93_RS00595 PF04542 Sigma-70 region 2 CEA93_RS00595 PF04545 Sigma-70, region 4 CEA93_RS00595 PF00140 Sigma-70 factor, region 1.2 CEA93_RS00600 PF00581 Rhodanese-like domain CEA93_RS00605 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CEA93_RS00605 PF01694 Rhomboid family CEA93_RS00610 PF03748 Flagellar basal body-associated protein FliL CEA93_RS00615 PF04345 Chorismate lyase CEA93_RS00620 PF01040 UbiA prenyltransferase family CEA93_RS00625 PF01553 Acyltransferase CEA93_RS00630 PF00717 Peptidase S24-like CEA93_RS00630 PF01726 LexA DNA binding domain CEA93_RS00640 PF01554 MatE CEA93_RS00645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEA93_RS00645 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS00650 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS00655 PF07226 Protein of unknown function (DUF1422) CEA93_RS00660 PF16353 Domain of unknown function(DUF4981) CEA93_RS00660 PF02929 Beta galactosidase small chain CEA93_RS00660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEA93_RS00660 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEA93_RS00660 PF00703 Glycosyl hydrolases family 2 CEA93_RS00670 PF05958 tRNA (Uracil-5-)-methyltransferase CEA93_RS00695 PF00239 Resolvase, N terminal domain CEA93_RS00695 PF02796 Helix-turn-helix domain of resolvase CEA93_RS00735 PF07804 HipA-like C-terminal domain CEA93_RS00735 PF13657 HipA N-terminal domain CEA93_RS00745 PF01381 Helix-turn-helix CEA93_RS00770 PF07715 TonB-dependent Receptor Plug Domain CEA93_RS00770 PF00593 TonB dependent receptor CEA93_RS00780 PF01177 Asp/Glu/Hydantoin racemase CEA93_RS00855 PF00962 Adenosine/AMP deaminase CEA93_RS00860 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS00860 PF00563 EAL domain CEA93_RS00860 PF13188 PAS domain CEA93_RS00860 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS00865 PF00072 Response regulator receiver domain CEA93_RS00865 PF02954 Bacterial regulatory protein, Fis family CEA93_RS00865 PF00158 Sigma-54 interaction domain CEA93_RS00870 PF00989 PAS fold CEA93_RS00870 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS00880 PF00120 Glutamine synthetase, catalytic domain CEA93_RS00880 PF03951 Glutamine synthetase, beta-Grasp domain CEA93_RS00885 PF00679 Elongation factor G C-terminus CEA93_RS00885 PF00009 Elongation factor Tu GTP binding domain CEA93_RS00885 PF03144 Elongation factor Tu domain 2 CEA93_RS00890 PF03631 Virulence factor BrkB CEA93_RS00895 PF02580 D-Tyr-tRNA(Tyr) deacylase CEA93_RS00900 PF09500 Putative thioesterase (yiiD_Cterm) CEA93_RS00900 PF00583 Acetyltransferase (GNAT) family CEA93_RS00910 PF01293 Phosphoenolpyruvate carboxykinase CEA93_RS00915 PF01430 Hsp33 protein CEA93_RS00920 PF01479 S4 domain CEA93_RS00925 PF11356 Type II secretion system protein C CEA93_RS00930 PF03958 Bacterial type II/III secretion system short domain CEA93_RS00930 PF00263 Bacterial type II and III secretion system protein CEA93_RS00935 PF00437 Type II/IV secretion system protein CEA93_RS00940 PF00482 Type II secretion system (T2SS), protein F CEA93_RS00945 PF07963 Prokaryotic N-terminal methylation motif CEA93_RS00945 PF08334 Type II secretion system (T2SS), protein G CEA93_RS00950 PF12019 Type II transport protein GspH CEA93_RS00955 PF07963 Prokaryotic N-terminal methylation motif CEA93_RS00955 PF02501 Type II secretion system (T2SS), protein I CEA93_RS00960 PF07963 Prokaryotic N-terminal methylation motif CEA93_RS00960 PF11612 Type II secretion system (T2SS), protein J CEA93_RS00965 PF03934 Type II secretion system (T2SS), protein K CEA93_RS00970 PF05134 Type II secretion system (T2SS), protein L CEA93_RS00970 PF12693 GspL periplasmic domain CEA93_RS00975 PF04612 Type II secretion system (T2SS), protein M CEA93_RS00985 PF00459 Inositol monophosphatase family CEA93_RS00990 PF00293 NUDIX domain CEA93_RS00995 PF01521 Iron-sulphur cluster biosynthesis CEA93_RS00995 PF01106 NifU-like domain CEA93_RS01000 PF00156 Phosphoribosyl transferase domain CEA93_RS01005 PF00561 alpha/beta hydrolase fold CEA93_RS01015 PF16921 Tex protein YqgF-like domain CEA93_RS01015 PF09371 Tex-like protein N-terminal domain CEA93_RS01015 PF17674 HHH domain CEA93_RS01015 PF00575 S1 RNA binding domain CEA93_RS01020 PF03449 Transcription elongation factor, N-terminal CEA93_RS01020 PF01272 Transcription elongation factor, GreA/GreB, C-term CEA93_RS01030 PF06942 GlpM protein CEA93_RS01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS01040 PF03466 LysR substrate binding domain CEA93_RS01050 PF00881 Nitroreductase family CEA93_RS01060 PF06483 Chitinase C CEA93_RS01060 PF00704 Glycosyl hydrolases family 18 CEA93_RS01065 PF00072 Response regulator receiver domain CEA93_RS01065 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS01070 PF00672 HAMP domain CEA93_RS01070 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS01075 PF00860 Permease family CEA93_RS01080 PF00270 DEAD/DEAH box helicase CEA93_RS01080 PF00271 Helicase conserved C-terminal domain CEA93_RS01080 PF17191 RecG wedge domain CEA93_RS01085 PF13291 ACT domain CEA93_RS01085 PF02824 TGS domain CEA93_RS01085 PF04607 Region found in RelA / SpoT proteins CEA93_RS01090 PF01192 RNA polymerase Rpb6 CEA93_RS01095 PF00625 Guanylate kinase CEA93_RS01100 PF02592 Putative vitamin uptake transporter CEA93_RS01105 PF02541 Ppx/GppA phosphatase family CEA93_RS01110 PF00270 DEAD/DEAH box helicase CEA93_RS01110 PF00271 Helicase conserved C-terminal domain CEA93_RS01115 PF00085 Thioredoxin CEA93_RS01120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEA93_RS01120 PF07497 Rho termination factor, RNA-binding domain CEA93_RS01120 PF07498 Rho termination factor, N-terminal domain CEA93_RS01130 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CEA93_RS01135 PF00175 Oxidoreductase NAD-binding domain CEA93_RS01135 PF00970 Oxidoreductase FAD-binding domain CEA93_RS01135 PF00111 2Fe-2S iron-sulfur cluster binding domain CEA93_RS01140 PF00175 Oxidoreductase NAD-binding domain CEA93_RS01175 PF13091 PLD-like domain CEA93_RS01185 PF01565 FAD binding domain CEA93_RS01185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CEA93_RS01190 PF08279 HTH domain CEA93_RS01190 PF03099 Biotin/lipoate A/B protein ligase family CEA93_RS01190 PF02237 Biotin protein ligase C terminal domain CEA93_RS01195 PF00485 Phosphoribulokinase / Uridine kinase family CEA93_RS01220 PF03143 Elongation factor Tu C-terminal domain CEA93_RS01220 PF03144 Elongation factor Tu domain 2 CEA93_RS01220 PF00009 Elongation factor Tu GTP binding domain CEA93_RS01225 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CEA93_RS01230 PF00467 KOW motif CEA93_RS01230 PF02357 Transcription termination factor nusG CEA93_RS01235 PF00298 Ribosomal protein L11, RNA binding domain CEA93_RS01235 PF03946 Ribosomal protein L11, N-terminal domain CEA93_RS01240 PF00687 Ribosomal protein L1p/L10e family CEA93_RS01245 PF00466 Ribosomal protein L10 CEA93_RS01250 PF16320 Ribosomal protein L7/L12 dimerisation domain CEA93_RS01250 PF00542 Ribosomal protein L7/L12 C-terminal domain CEA93_RS01255 PF04561 RNA polymerase Rpb2, domain 2 CEA93_RS01255 PF04565 RNA polymerase Rpb2, domain 3 CEA93_RS01255 PF10385 RNA polymerase beta subunit external 1 domain CEA93_RS01255 PF00562 RNA polymerase Rpb2, domain 6 CEA93_RS01255 PF04563 RNA polymerase beta subunit CEA93_RS01255 PF04560 RNA polymerase Rpb2, domain 7 CEA93_RS01260 PF05000 RNA polymerase Rpb1, domain 4 CEA93_RS01260 PF04983 RNA polymerase Rpb1, domain 3 CEA93_RS01260 PF00623 RNA polymerase Rpb1, domain 2 CEA93_RS01260 PF04997 RNA polymerase Rpb1, domain 1 CEA93_RS01260 PF04998 RNA polymerase Rpb1, domain 5 CEA93_RS01265 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CEA93_RS01270 PF09297 NADH pyrophosphatase zinc ribbon domain CEA93_RS01270 PF00293 NUDIX domain CEA93_RS01275 PF01208 Uroporphyrinogen decarboxylase (URO-D) CEA93_RS01280 PF08360 QacR-like protein, C-terminal region CEA93_RS01280 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS01290 PF01551 Peptidase family M23 CEA93_RS01295 PF01676 Metalloenzyme superfamily CEA93_RS01295 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CEA93_RS01305 PF00672 HAMP domain CEA93_RS01305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS01305 PF02743 Cache domain CEA93_RS01310 PF02080 TrkA-C domain CEA93_RS01310 PF03600 Citrate transporter CEA93_RS01315 PF02666 Phosphatidylserine decarboxylase CEA93_RS01320 PF03193 RsgA GTPase CEA93_RS01325 PF00929 Exonuclease CEA93_RS01375 PF08331 Domain of unknown function (DUF1730) CEA93_RS01380 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CEA93_RS01385 PF01520 N-acetylmuramoyl-L-alanine amidase CEA93_RS01390 PF08676 MutL C terminal dimerisation domain CEA93_RS01390 PF01119 DNA mismatch repair protein, C-terminal domain CEA93_RS01400 PF17209 Hfq protein CEA93_RS01405 PF13167 GTP-binding GTPase N-terminal CEA93_RS01405 PF01926 50S ribosome-binding GTPase CEA93_RS01405 PF16360 GTP-binding GTPase Middle Region CEA93_RS01410 PF01145 SPFH domain / Band 7 family CEA93_RS01410 PF12221 Bacterial membrane protein N terminal CEA93_RS01415 PF01145 SPFH domain / Band 7 family CEA93_RS01420 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CEA93_RS01425 PF04102 SlyX CEA93_RS01435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEA93_RS01435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEA93_RS01440 PF08348 YheO-like PAS domain CEA93_RS01440 PF13309 HTH domain CEA93_RS01445 PF02635 DsrE/DsrF-like family CEA93_RS01450 PF02635 DsrE/DsrF-like family CEA93_RS01455 PF04077 DsrH like protein CEA93_RS01460 PF00164 Ribosomal protein S12/S23 CEA93_RS01465 PF00177 Ribosomal protein S7p/S5e CEA93_RS01470 PF00009 Elongation factor Tu GTP binding domain CEA93_RS01470 PF14492 Elongation Factor G, domain II CEA93_RS01470 PF00679 Elongation factor G C-terminus CEA93_RS01470 PF03764 Elongation factor G, domain IV CEA93_RS01470 PF03144 Elongation factor Tu domain 2 CEA93_RS01475 PF03143 Elongation factor Tu C-terminal domain CEA93_RS01475 PF00009 Elongation factor Tu GTP binding domain CEA93_RS01475 PF03144 Elongation factor Tu domain 2 CEA93_RS01480 PF01250 Ribosomal protein S6 CEA93_RS01485 PF00436 Single-strand binding protein family CEA93_RS01490 PF01084 Ribosomal protein S18 CEA93_RS01495 PF01281 Ribosomal protein L9, N-terminal domain CEA93_RS01495 PF03948 Ribosomal protein L9, C-terminal domain CEA93_RS01505 PF03796 DnaB-like helicase C terminal domain CEA93_RS01505 PF00772 DnaB-like helicase N terminal domain CEA93_RS01510 PF01168 Alanine racemase, N-terminal domain CEA93_RS01510 PF00842 Alanine racemase, C-terminal domain CEA93_RS01515 PF00342 Phosphoglucose isomerase CEA93_RS01520 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS01520 PF03050 Transposase IS66 family CEA93_RS01520 PF13817 IS66 C-terminal element CEA93_RS01520 PF13007 Transposase C of IS166 homeodomain CEA93_RS01540 PF01475 Ferric uptake regulator family CEA93_RS01545 PF01207 Dihydrouridine synthase (Dus) CEA93_RS01565 PF00258 Flavodoxin CEA93_RS01565 PF00175 Oxidoreductase NAD-binding domain CEA93_RS01565 PF00667 FAD binding domain CEA93_RS01570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEA93_RS01570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEA93_RS01575 PF01507 Phosphoadenosine phosphosulfate reductase family CEA93_RS01645 PF00999 Sodium/hydrogen exchanger family CEA93_RS01650 PF02310 B12 binding domain CEA93_RS01650 PF02607 B12 binding domain CEA93_RS01650 PF02574 Homocysteine S-methyltransferase CEA93_RS01650 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEA93_RS01650 PF00809 Pterin binding enzyme CEA93_RS01655 PF00696 Amino acid kinase family CEA93_RS01655 PF01842 ACT domain CEA93_RS01660 PF00266 Aminotransferase class-V CEA93_RS01675 PF01769 Divalent cation transporter CEA93_RS01675 PF00571 CBS domain CEA93_RS01675 PF03448 MgtE intracellular N domain CEA93_RS01685 PF17755 UvrA DNA-binding domain CEA93_RS01685 PF00005 ABC transporter CEA93_RS01685 PF17760 UvrA interaction domain CEA93_RS01690 PF00483 Nucleotidyl transferase CEA93_RS01695 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS01700 PF00436 Single-strand binding protein family CEA93_RS01705 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS01705 PF17157 Gammaproteobacterial periplasmic sensor domain CEA93_RS01705 PF00563 EAL domain CEA93_RS01725 PF03958 Bacterial type II/III secretion system short domain CEA93_RS01725 PF00263 Bacterial type II and III secretion system protein CEA93_RS01730 PF01471 Putative peptidoglycan binding domain CEA93_RS01730 PF13401 AAA domain CEA93_RS01740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEA93_RS01740 PF00437 Type II/IV secretion system protein CEA93_RS01745 PF00482 Type II secretion system (T2SS), protein F CEA93_RS01755 PF07963 Prokaryotic N-terminal methylation motif CEA93_RS01795 PF04085 rod shape-determining protein MreC CEA93_RS01800 PF04093 rod shape-determining protein MreD CEA93_RS01805 PF02545 Maf-like protein CEA93_RS01810 PF10150 Ribonuclease E/G family CEA93_RS01810 PF00575 S1 RNA binding domain CEA93_RS01815 PF13116 Protein of unknown function CEA93_RS01815 PF13502 AsmA-like C-terminal region CEA93_RS01820 PF00795 Carbon-nitrogen hydrolase CEA93_RS01825 PF01523 Putative modulator of DNA gyrase CEA93_RS01835 PF06877 Regulator of ribonuclease activity B CEA93_RS01850 PF00582 Universal stress protein family CEA93_RS01860 PF16868 NMT1-like family CEA93_RS01870 PF01316 Arginine repressor, DNA binding domain CEA93_RS01870 PF02863 Arginine repressor, C-terminal domain CEA93_RS01875 PF00056 lactate/malate dehydrogenase, NAD binding domain CEA93_RS01875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEA93_RS01880 PF13520 Amino acid permease CEA93_RS01885 PF00348 Polyprenyl synthetase CEA93_RS01895 PF00829 Ribosomal prokaryotic L21 protein CEA93_RS01900 PF01016 Ribosomal L27 protein CEA93_RS01905 PF01926 50S ribosome-binding GTPase CEA93_RS01905 PF01018 GTP1/OBG CEA93_RS01910 PF06738 Putative threonine/serine exporter CEA93_RS01915 PF12821 Threonine/Serine exporter, ThrE CEA93_RS01920 PF00186 Dihydrofolate reductase CEA93_RS01925 PF00149 Calcineurin-like phosphoesterase CEA93_RS01930 PF04379 ApaG domain CEA93_RS01935 PF00398 Ribosomal RNA adenine dimethylase CEA93_RS01940 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEA93_RS01945 PF09312 SurA N-terminal domain CEA93_RS01950 PF04453 LPS transport system D CEA93_RS01950 PF03968 OstA-like protein CEA93_RS01955 PF05099 Tellurite resistance protein TerB CEA93_RS01955 PF00226 DnaJ domain CEA93_RS02005 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CEA93_RS02005 PF01464 Transglycosylase SLT domain CEA93_RS02010 PF04362 Bacterial Fe(2+) trafficking CEA93_RS02015 PF00730 HhH-GPD superfamily base excision DNA repair protein CEA93_RS02015 PF14815 NUDIX domain CEA93_RS02015 PF00633 Helix-hairpin-helix motif CEA93_RS02020 PF02390 Putative methyltransferase CEA93_RS02025 PF04960 Glutaminase CEA93_RS02030 PF06969 HemN C-terminal domain CEA93_RS02030 PF04055 Radical SAM superfamily CEA93_RS02035 PF01725 Ham1 family CEA93_RS02045 PF02594 Uncharacterised ACR, YggU family COG1872 CEA93_RS02050 PF02325 YGGT family CEA93_RS02055 PF14748 Pyrroline-5-carboxylate reductase dimerisation CEA93_RS02055 PF03807 NADP oxidoreductase coenzyme F420-dependent CEA93_RS02060 PF01168 Alanine racemase, N-terminal domain CEA93_RS02065 PF00437 Type II/IV secretion system protein CEA93_RS02070 PF00437 Type II/IV secretion system protein CEA93_RS02075 PF03652 Holliday junction resolvase CEA93_RS02080 PF02622 Uncharacterized ACR, COG1678 CEA93_RS02085 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CEA93_RS02085 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CEA93_RS02090 PF04452 RNA methyltransferase CEA93_RS02095 PF04231 Endonuclease I CEA93_RS02100 PF10263 SprT-like family CEA93_RS02100 PF17283 SprT-like zinc ribbon domain CEA93_RS02105 PF02772 S-adenosylmethionine synthetase, central domain CEA93_RS02105 PF02773 S-adenosylmethionine synthetase, C-terminal domain CEA93_RS02105 PF00438 S-adenosylmethionine synthetase, N-terminal domain CEA93_RS02110 PF02780 Transketolase, C-terminal domain CEA93_RS02110 PF00456 Transketolase, thiamine diphosphate binding domain CEA93_RS02110 PF02779 Transketolase, pyrimidine binding domain CEA93_RS02115 PF03466 LysR substrate binding domain CEA93_RS02115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS02120 PF07715 TonB-dependent Receptor Plug Domain CEA93_RS02120 PF00593 TonB dependent receptor CEA93_RS02125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEA93_RS02125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEA93_RS02130 PF00162 Phosphoglycerate kinase CEA93_RS02140 PF01116 Fructose-bisphosphate aldolase class-II CEA93_RS02145 PF00924 Mechanosensitive ion channel CEA93_RS02145 PF05552 Conserved TM helix CEA93_RS02150 PF01810 LysE type translocator CEA93_RS02155 PF03466 LysR substrate binding domain CEA93_RS02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS02165 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS02165 PF17158 Membrane-associated sensor, integral membrane domain CEA93_RS02170 PF00224 Pyruvate kinase, barrel domain CEA93_RS02170 PF02887 Pyruvate kinase, alpha/beta domain CEA93_RS02175 PF00455 DeoR C terminal sensor domain CEA93_RS02175 PF08220 DeoR-like helix-turn-helix domain CEA93_RS02180 PF01380 SIS domain CEA93_RS02185 PF11999 Protein of unknown function (DUF3494) CEA93_RS02185 PF02368 Bacterial Ig-like domain (group 2) CEA93_RS02195 PF00472 RF-1 domain CEA93_RS02200 PF05638 Type VI secretion system effector, Hcp CEA93_RS02205 PF04717 Type VI secretion system, phage-baseplate injector CEA93_RS02210 PF13503 Domain of unknown function (DUF4123) CEA93_RS02305 PF15935 RNase LS, bacterial toxin CEA93_RS02310 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA CEA93_RS02315 PF02899 Phage integrase, N-terminal SAM-like domain CEA93_RS02315 PF00589 Phage integrase family CEA93_RS02355 PF01695 IstB-like ATP binding protein CEA93_RS02360 PF00665 Integrase core domain CEA93_RS02395 PF13737 Transposase DDE domain CEA93_RS02405 PF02796 Helix-turn-helix domain of resolvase CEA93_RS02405 PF00239 Resolvase, N terminal domain CEA93_RS02420 PF01420 Type I restriction modification DNA specificity domain CEA93_RS02425 PF12161 HsdM N-terminal domain CEA93_RS02425 PF02384 N-6 DNA Methylase CEA93_RS02435 PF02384 N-6 DNA Methylase CEA93_RS02435 PF12161 HsdM N-terminal domain CEA93_RS02465 PF01555 DNA methylase CEA93_RS02475 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CEA93_RS02475 PF04851 Type III restriction enzyme, res subunit CEA93_RS02475 PF08463 EcoEI R protein C-terminal CEA93_RS02475 PF00271 Helicase conserved C-terminal domain CEA93_RS02515 PF00580 UvrD/REP helicase N-terminal domain CEA93_RS02515 PF13361 UvrD-like helicase C-terminal domain CEA93_RS02535 PF13657 HipA N-terminal domain CEA93_RS02535 PF07804 HipA-like C-terminal domain CEA93_RS02550 PF03979 Sigma-70 factor, region 1.1 CEA93_RS02550 PF00140 Sigma-70 factor, region 1.2 CEA93_RS02550 PF04542 Sigma-70 region 2 CEA93_RS02550 PF04545 Sigma-70, region 4 CEA93_RS02550 PF04546 Sigma-70, non-essential region CEA93_RS02550 PF04539 Sigma-70 region 3 CEA93_RS02555 PF08275 DNA primase catalytic core, N-terminal domain CEA93_RS02555 PF08278 DNA primase DnaG DnaB-binding CEA93_RS02555 PF10410 DnaB-helicase binding domain of primase CEA93_RS02555 PF01807 CHC2 zinc finger CEA93_RS02560 PF09424 Yqey-like protein CEA93_RS02565 PF01165 Ribosomal protein S21 CEA93_RS02570 PF00814 Glycoprotease family CEA93_RS02580 PF02660 Glycerol-3-phosphate acyltransferase CEA93_RS02585 PF02152 Dihydroneopterin aldolase CEA93_RS02590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEA93_RS02595 PF02673 Bacitracin resistance protein BacA CEA93_RS02600 PF04977 Septum formation initiator CEA93_RS02605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CEA93_RS02610 PF02542 YgbB family CEA93_RS02615 PF01142 tRNA pseudouridine synthase D (TruD) CEA93_RS02620 PF01975 Survival protein SurE CEA93_RS02630 PF01476 LysM domain CEA93_RS02630 PF01551 Peptidase family M23 CEA93_RS02635 PF04539 Sigma-70 region 3 CEA93_RS02635 PF04545 Sigma-70, region 4 CEA93_RS02635 PF04542 Sigma-70 region 2 CEA93_RS02635 PF00140 Sigma-70 factor, region 1.2 CEA93_RS02640 PF00488 MutS domain V CEA93_RS02640 PF05190 MutS family domain IV CEA93_RS02640 PF05192 MutS domain III CEA93_RS02640 PF05188 MutS domain II CEA93_RS02640 PF01624 MutS domain I CEA93_RS02645 PF00291 Pyridoxal-phosphate dependent enzyme CEA93_RS02655 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS02665 PF00005 ABC transporter CEA93_RS02665 PF12857 TOBE-like domain CEA93_RS02670 PF02464 Competence-damaged protein CEA93_RS02675 PF00154 recA bacterial DNA recombination protein CEA93_RS02680 PF02631 RecX family CEA93_RS02685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEA93_RS02685 PF02272 DHHA1 domain CEA93_RS02685 PF01411 tRNA synthetases class II (A) CEA93_RS02690 PF01842 ACT domain CEA93_RS02690 PF13840 ACT domain CEA93_RS02690 PF00696 Amino acid kinase family CEA93_RS02695 PF02599 Global regulator protein family CEA93_RS02735 PF04277 Oxaloacetate decarboxylase, gamma chain CEA93_RS02740 PF00364 Biotin-requiring enzyme CEA93_RS02740 PF02436 Conserved carboxylase domain CEA93_RS02740 PF00682 HMGL-like CEA93_RS02745 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CEA93_RS02750 PF08240 Alcohol dehydrogenase GroES-like domain CEA93_RS02750 PF00107 Zinc-binding dehydrogenase CEA93_RS02755 PF09335 SNARE associated Golgi protein CEA93_RS02760 PF00675 Insulinase (Peptidase family M16) CEA93_RS02760 PF05193 Peptidase M16 inactive domain CEA93_RS02765 PF04262 Glutamate-cysteine ligase CEA93_RS02770 PF02664 S-Ribosylhomocysteinase (LuxS) CEA93_RS02775 PF00571 CBS domain CEA93_RS02775 PF03471 Transporter associated domain CEA93_RS02775 PF01595 Cyclin M transmembrane N-terminal domain CEA93_RS02780 PF01578 Cytochrome C assembly protein CEA93_RS02785 PF02881 SRP54-type protein, helical bundle domain CEA93_RS02785 PF02978 Signal peptide binding domain CEA93_RS02785 PF00448 SRP54-type protein, GTPase domain CEA93_RS02790 PF00886 Ribosomal protein S16 CEA93_RS02795 PF05239 PRC-barrel domain CEA93_RS02795 PF01782 RimM N-terminal domain CEA93_RS02800 PF01746 tRNA (Guanine-1)-methyltransferase CEA93_RS02805 PF01245 Ribosomal protein L19 CEA93_RS02810 PF03884 DNA gyrase inhibitor YacG CEA93_RS02815 PF07072 Cell division protein CEA93_RS02820 PF01121 Dephospho-CoA kinase CEA93_RS02825 PF01478 Type IV leader peptidase family CEA93_RS02825 PF06750 Bacterial Peptidase A24 N-terminal domain CEA93_RS02830 PF00482 Type II secretion system (T2SS), protein F CEA93_RS02835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEA93_RS02835 PF00437 Type II/IV secretion system protein CEA93_RS02840 PF07963 Prokaryotic N-terminal methylation motif CEA93_RS02840 PF00114 Pilin (bacterial filament) CEA93_RS02845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEA93_RS02845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEA93_RS02850 PF01510 N-acetylmuramoyl-L-alanine amidase CEA93_RS02855 PF00258 Flavodoxin CEA93_RS02860 PF00589 Phage integrase family CEA93_RS02860 PF02899 Phage integrase, N-terminal SAM-like domain CEA93_RS02865 PF10411 Disulfide bond isomerase protein N-terminus CEA93_RS02865 PF13098 Thioredoxin-like domain CEA93_RS02870 PF17768 RecJ OB domain CEA93_RS02870 PF02272 DHHA1 domain CEA93_RS02870 PF01368 DHH family CEA93_RS02875 PF00392 Bacterial regulatory proteins, gntR family CEA93_RS02875 PF07729 FCD domain CEA93_RS02880 PF00456 Transketolase, thiamine diphosphate binding domain CEA93_RS02880 PF17831 Pyruvate dehydrogenase E1 component middle domain CEA93_RS02885 PF02817 e3 binding domain CEA93_RS02885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEA93_RS02885 PF00364 Biotin-requiring enzyme CEA93_RS02890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEA93_RS02890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS02895 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS02900 PF00156 Phosphoribosyl transferase domain CEA93_RS02905 PF00484 Carbonic anhydrase CEA93_RS02910 PF01740 STAS domain CEA93_RS02910 PF00916 Sulfate permease family CEA93_RS02915 PF00005 ABC transporter CEA93_RS02920 PF01061 ABC-2 type transporter CEA93_RS02930 PF02569 Pantoate-beta-alanine ligase CEA93_RS02935 PF02548 Ketopantoate hydroxymethyltransferase CEA93_RS02940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEA93_RS02945 PF12626 Polymerase A arginine-rich C-terminus CEA93_RS02945 PF12627 Probable RNA and SrmB- binding site of polymerase A CEA93_RS02945 PF01743 Poly A polymerase head domain CEA93_RS02950 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEA93_RS02955 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEA93_RS02960 PF03749 Sugar fermentation stimulation protein RE domain CEA93_RS02960 PF17746 SfsA N-terminal OB domain CEA93_RS02965 PF08482 ATP-dependent helicase C-terminal CEA93_RS02965 PF00271 Helicase conserved C-terminal domain CEA93_RS02965 PF04408 Helicase associated domain (HA2) CEA93_RS02965 PF00270 DEAD/DEAH box helicase CEA93_RS02970 PF00912 Transglycosylase CEA93_RS02970 PF00905 Penicillin binding protein transpeptidase domain CEA93_RS02970 PF14814 Bifunctional transglycosylase second domain CEA93_RS02975 PF01734 Patatin-like phospholipase CEA93_RS02980 PF11791 Aconitate B N-terminal domain CEA93_RS02980 PF00330 Aconitase family (aconitate hydratase) CEA93_RS02980 PF06434 Aconitate hydratase 2 N-terminus CEA93_RS02985 PF02595 Glycerate kinase family CEA93_RS02990 PF02447 GntP family permease CEA93_RS02995 PF17853 GGDEF-like domain CEA93_RS02995 PF13556 PucR C-terminal helix-turn-helix domain CEA93_RS02995 PF05651 Putative sugar diacid recognition CEA93_RS03000 PF06062 Uncharacterised protein family (UPF0231) CEA93_RS03005 PF00543 Nitrogen regulatory protein P-II CEA93_RS03010 PF00909 Ammonium Transporter Family CEA93_RS03015 PF13416 Bacterial extracellular solute-binding protein CEA93_RS03025 PF00005 ABC transporter CEA93_RS03025 PF08402 TOBE domain CEA93_RS03030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEA93_RS03030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEA93_RS03030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEA93_RS03030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEA93_RS03035 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CEA93_RS03035 PF06165 Glycosyltransferase family 36 CEA93_RS03040 PF02838 Glycosyl hydrolase family 20, domain 2 CEA93_RS03040 PF00728 Glycosyl hydrolase family 20, catalytic domain CEA93_RS03045 PF01869 BadF/BadG/BcrA/BcrD ATPase family CEA93_RS03055 PF00005 ABC transporter CEA93_RS03055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEA93_RS03060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEA93_RS03060 PF00005 ABC transporter CEA93_RS03065 PF12911 N-terminal TM domain of oligopeptide transport permease C CEA93_RS03065 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS03070 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS03075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEA93_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS03080 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS03080 PF09308 LuxQ, periplasmic CEA93_RS03080 PF00072 Response regulator receiver domain CEA93_RS03085 PF08468 Methyltransferase small domain N-terminal CEA93_RS03085 PF05175 Methyltransferase small domain CEA93_RS03090 PF01594 AI-2E family transporter CEA93_RS03095 PF00202 Aminotransferase class-III CEA93_RS03100 PF01521 Iron-sulphur cluster biosynthesis CEA93_RS03110 PF00873 AcrB/AcrD/AcrF family CEA93_RS03115 PF01476 LysM domain CEA93_RS03115 PF01551 Peptidase family M23 CEA93_RS03115 PF08525 Opacity-associated protein A N-terminal motif CEA93_RS03120 PF01479 S4 domain CEA93_RS03120 PF00579 tRNA synthetases class I (W and Y) CEA93_RS03130 PF03448 MgtE intracellular N domain CEA93_RS03130 PF00571 CBS domain CEA93_RS03130 PF01769 Divalent cation transporter CEA93_RS03135 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CEA93_RS03140 PF13609 Gram-negative porin CEA93_RS03145 PF03449 Transcription elongation factor, N-terminal CEA93_RS03145 PF01272 Transcription elongation factor, GreA/GreB, C-term CEA93_RS03150 PF01985 CRS1 / YhbY (CRM) domain CEA93_RS03155 PF01728 FtsJ-like methyltransferase CEA93_RS03160 PF17862 AAA+ lid domain CEA93_RS03160 PF06480 FtsH Extracellular CEA93_RS03160 PF01434 Peptidase family M41 CEA93_RS03160 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS03165 PF00809 Pterin binding enzyme CEA93_RS03170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEA93_RS03170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEA93_RS03170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEA93_RS03170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEA93_RS03175 PF03840 Preprotein translocase SecG subunit CEA93_RS03190 PF17384 RimP C-terminal SH3 domain CEA93_RS03190 PF02576 RimP N-terminal domain CEA93_RS03195 PF08529 NusA N-terminal domain CEA93_RS03195 PF00575 S1 RNA binding domain CEA93_RS03195 PF13184 NusA-like KH domain CEA93_RS03200 PF00009 Elongation factor Tu GTP binding domain CEA93_RS03200 PF11987 Translation-initiation factor 2 CEA93_RS03200 PF04760 Translation initiation factor IF-2, N-terminal region CEA93_RS03200 PF08364 Bacterial translation initiation factor IF-2 associated region CEA93_RS03205 PF02033 Ribosome-binding factor A CEA93_RS03210 PF01509 TruB family pseudouridylate synthase (N terminal domain) CEA93_RS03210 PF09157 Pseudouridine synthase II TruB, C-terminal CEA93_RS03210 PF16198 tRNA pseudouridylate synthase B C-terminal domain CEA93_RS03215 PF00312 Ribosomal protein S15 CEA93_RS03220 PF00575 S1 RNA binding domain CEA93_RS03220 PF03725 3' exoribonuclease family, domain 2 CEA93_RS03220 PF01138 3' exoribonuclease family, domain 1 CEA93_RS03220 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CEA93_RS03220 PF00013 KH domain CEA93_RS03225 PF13181 Tetratricopeptide repeat CEA93_RS03225 PF07719 Tetratricopeptide repeat CEA93_RS03230 PF01047 MarR family CEA93_RS03240 PF01136 Peptidase family U32 CEA93_RS03245 PF01136 Peptidase family U32 CEA93_RS03250 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS03250 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS03250 PF00563 EAL domain CEA93_RS03260 PF13508 Acetyltransferase (GNAT) domain CEA93_RS03270 PF00583 Acetyltransferase (GNAT) family CEA93_RS03275 PF00563 EAL domain CEA93_RS03275 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS03275 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS03280 PF16658 Class II release factor RF3, C-terminal domain CEA93_RS03280 PF03144 Elongation factor Tu domain 2 CEA93_RS03280 PF00009 Elongation factor Tu GTP binding domain CEA93_RS03285 PF00270 DEAD/DEAH box helicase CEA93_RS03285 PF00271 Helicase conserved C-terminal domain CEA93_RS03290 PF05175 Methyltransferase small domain CEA93_RS03295 PF05525 Branched-chain amino acid transport protein CEA93_RS03305 PF00152 tRNA synthetases class II (D, K and N) CEA93_RS03305 PF01336 OB-fold nucleic acid binding domain CEA93_RS03310 PF00158 Sigma-54 interaction domain CEA93_RS03310 PF00072 Response regulator receiver domain CEA93_RS03310 PF02954 Bacterial regulatory protein, Fis family CEA93_RS03320 PF00248 Aldo/keto reductase family CEA93_RS03325 PF02976 DNA mismatch repair enzyme MutH CEA93_RS03330 PF00293 NUDIX domain CEA93_RS03335 PF05524 PEP-utilising enzyme, N-terminal CEA93_RS03335 PF01590 GAF domain CEA93_RS03335 PF00391 PEP-utilising enzyme, mobile domain CEA93_RS03335 PF02896 PEP-utilising enzyme, TIM barrel domain CEA93_RS03340 PF01925 Sulfite exporter TauE/SafE CEA93_RS03345 PF01790 Prolipoprotein diacylglyceryl transferase CEA93_RS03350 PF00303 Thymidylate synthase CEA93_RS03375 PF01219 Prokaryotic diacylglycerol kinase CEA93_RS03380 PF08019 Phosphoethanolamine transferase EptA/EptB CEA93_RS03380 PF00884 Sulfatase CEA93_RS03390 PF03050 Transposase IS66 family CEA93_RS03390 PF13817 IS66 C-terminal element CEA93_RS03390 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS03390 PF13007 Transposase C of IS166 homeodomain CEA93_RS03410 PF07411 Domain of unknown function (DUF1508) CEA93_RS03415 PF01381 Helix-turn-helix CEA93_RS03425 PF13657 HipA N-terminal domain CEA93_RS03425 PF07804 HipA-like C-terminal domain CEA93_RS03465 PF03050 Transposase IS66 family CEA93_RS03465 PF13817 IS66 C-terminal element CEA93_RS03465 PF13007 Transposase C of IS166 homeodomain CEA93_RS03465 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS03495 PF00303 Thymidylate synthase CEA93_RS03500 PF00303 Thymidylate synthase CEA93_RS03505 PF02690 Na+/Pi-cotransporter CEA93_RS03510 PF03466 LysR substrate binding domain CEA93_RS03510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS03515 PF01022 Bacterial regulatory protein, arsR family CEA93_RS03520 PF01649 Ribosomal protein S20 CEA93_RS03525 PF03023 Lipid II flippase MurJ CEA93_RS03530 PF06574 FAD synthetase CEA93_RS03530 PF01687 Riboflavin kinase CEA93_RS03535 PF06827 Zinc finger found in FPG and IleRS CEA93_RS03535 PF00133 tRNA synthetases class I (I, L, M and V) CEA93_RS03535 PF08264 Anticodon-binding domain of tRNA CEA93_RS03540 PF01252 Signal peptidase (SPase) II CEA93_RS03545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEA93_RS03550 PF02401 LytB protein CEA93_RS03555 PF02554 Carbon starvation protein CstA CEA93_RS03570 PF13580 SIS domain CEA93_RS03575 PF03702 Anhydro-N-acetylmuramic acid kinase CEA93_RS03580 PF00933 Glycosyl hydrolase family 3 N terminal domain CEA93_RS03585 PF04397 LytTr DNA-binding domain CEA93_RS03585 PF00072 Response regulator receiver domain CEA93_RS03590 PF06580 Histidine kinase CEA93_RS03590 PF07694 5TMR of 5TMR-LYT CEA93_RS03595 PF00793 DAHP synthetase I family CEA93_RS03600 PF02153 Prephenate dehydrogenase CEA93_RS03600 PF01817 Chorismate mutase type II CEA93_RS03605 PF07238 PilZ domain CEA93_RS03610 PF12848 ABC transporter CEA93_RS03610 PF00005 ABC transporter CEA93_RS03615 PF14718 Soluble lytic murein transglycosylase L domain CEA93_RS03615 PF01464 Transglycosylase SLT domain CEA93_RS03620 PF01371 Trp repressor protein CEA93_RS03625 PF01931 Protein of unknown function DUF84 CEA93_RS03630 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS03630 PF00563 EAL domain CEA93_RS03635 PF13416 Bacterial extracellular solute-binding protein CEA93_RS03640 PF00800 Prephenate dehydratase CEA93_RS03640 PF01817 Chorismate mutase type II CEA93_RS03645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEA93_RS03650 PF13525 Outer membrane lipoprotein CEA93_RS03655 PF01479 S4 domain CEA93_RS03655 PF00849 RNA pseudouridylate synthase CEA93_RS03660 PF02578 Multi-copper polyphenol oxidoreductase laccase CEA93_RS03665 PF17871 AAA lid domain CEA93_RS03665 PF10431 C-terminal, D2-small domain, of ClpB protein CEA93_RS03665 PF02861 Clp amino terminal domain, pathogenicity island component CEA93_RS03665 PF07724 AAA domain (Cdc48 subfamily) CEA93_RS03665 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS03705 PF00881 Nitroreductase family CEA93_RS03710 PF00037 4Fe-4S binding domain CEA93_RS03715 PF16325 Peptidase family U32 C-terminal domain CEA93_RS03715 PF01136 Peptidase family U32 CEA93_RS03720 PF04381 Putative exonuclease, RdgC CEA93_RS03725 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS03725 PF00072 Response regulator receiver domain CEA93_RS03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS03730 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS03730 PF00989 PAS fold CEA93_RS03730 PF11808 Phosphate regulon sensor protein PhoR CEA93_RS03735 PF12849 PBP superfamily domain CEA93_RS03740 PF02541 Ppx/GppA phosphatase family CEA93_RS03745 PF13089 Polyphosphate kinase N-terminal domain CEA93_RS03745 PF02503 Polyphosphate kinase middle domain CEA93_RS03745 PF17941 Polyphosphate kinase C-terminal domain 1 CEA93_RS03745 PF13090 Polyphosphate kinase C-terminal domain 2 CEA93_RS03750 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS03755 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS03760 PF00005 ABC transporter CEA93_RS03765 PF01895 PhoU domain CEA93_RS03770 PF03932 CutC family CEA93_RS03775 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEA93_RS03775 PF00578 AhpC/TSA family CEA93_RS03780 PF03466 LysR substrate binding domain CEA93_RS03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS03785 PF01274 Malate synthase CEA93_RS03790 PF00463 Isocitrate lyase family CEA93_RS03795 PF00571 CBS domain CEA93_RS03800 PF02547 Queuosine biosynthesis protein CEA93_RS03805 PF01702 Queuine tRNA-ribosyltransferase CEA93_RS03810 PF02699 Preprotein translocase subunit CEA93_RS03815 PF07549 SecD/SecF GG Motif CEA93_RS03815 PF02355 Protein export membrane protein CEA93_RS03815 PF13721 SecD export protein N-terminal TM region CEA93_RS03820 PF02355 Protein export membrane protein CEA93_RS03820 PF07549 SecD/SecF GG Motif CEA93_RS03825 PF00459 Inositol monophosphatase family CEA93_RS03830 PF00588 SpoU rRNA Methylase family CEA93_RS03835 PF02082 Transcriptional regulator CEA93_RS03840 PF00266 Aminotransferase class-V CEA93_RS03845 PF01592 NifU-like N terminal domain CEA93_RS03850 PF01521 Iron-sulphur cluster biosynthesis CEA93_RS03855 PF07743 HSCB C-terminal oligomerisation domain CEA93_RS03855 PF00226 DnaJ domain CEA93_RS03860 PF00012 Hsp70 protein CEA93_RS03865 PF00111 2Fe-2S iron-sulfur cluster binding domain CEA93_RS03870 PF04384 Iron-sulphur cluster assembly CEA93_RS03875 PF12404 Peptidase CEA93_RS03875 PF00883 Cytosol aminopeptidase family, catalytic domain CEA93_RS03880 PF00334 Nucleoside diphosphate kinase CEA93_RS03885 PF04055 Radical SAM superfamily CEA93_RS03890 PF13464 Domain of unknown function (DUF4115) CEA93_RS03895 PF04551 GcpE protein CEA93_RS03900 PF03129 Anticodon binding domain CEA93_RS03900 PF13393 Histidyl-tRNA synthetase CEA93_RS03905 PF09976 Tetratricopeptide repeat-like domain CEA93_RS03910 PF13360 PQQ-like domain CEA93_RS03915 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEA93_RS03915 PF01926 50S ribosome-binding GTPase CEA93_RS03925 PF02601 Exonuclease VII, large subunit CEA93_RS03925 PF13742 OB-fold nucleic acid binding domain CEA93_RS03930 PF00571 CBS domain CEA93_RS03930 PF00478 IMP dehydrogenase / GMP reductase domain CEA93_RS03935 PF00958 GMP synthase C terminal domain CEA93_RS03935 PF02540 NAD synthase CEA93_RS03935 PF00117 Glutamine amidotransferase class-I CEA93_RS03940 PF08543 Phosphomethylpyrimidine kinase CEA93_RS03945 PF06483 Chitinase C CEA93_RS03945 PF00704 Glycosyl hydrolases family 18 CEA93_RS03950 PF01184 GPR1/FUN34/yaaH family CEA93_RS03955 PF01235 Sodium:alanine symporter family CEA93_RS03960 PF01266 FAD dependent oxidoreductase CEA93_RS03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS03965 PF03466 LysR substrate binding domain CEA93_RS03970 PF02028 BCCT, betaine/carnitine/choline family transporter CEA93_RS03980 PF00141 Peroxidase CEA93_RS03985 PF00874 PRD domain CEA93_RS03985 PF08279 HTH domain CEA93_RS03985 PF05043 Mga helix-turn-helix domain CEA93_RS03985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEA93_RS03990 PF07071 KDGP aldolase CEA93_RS03995 PF03841 L-seryl-tRNA selenium transferase CEA93_RS04000 PF01979 Amidohydrolase family CEA93_RS04030 PF17757 UvrB interaction domain CEA93_RS04030 PF02151 UvrB/uvrC motif CEA93_RS04030 PF12344 Ultra-violet resistance protein B CEA93_RS04030 PF00271 Helicase conserved C-terminal domain CEA93_RS04030 PF04851 Type III restriction enzyme, res subunit CEA93_RS04035 PF13737 Transposase DDE domain CEA93_RS04155 PF04002 RadC-like JAB domain CEA93_RS04170 PF04471 Restriction endonuclease CEA93_RS04170 PF14338 Mrr N-terminal domain CEA93_RS04175 PF08463 EcoEI R protein C-terminal CEA93_RS04175 PF00271 Helicase conserved C-terminal domain CEA93_RS04175 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CEA93_RS04175 PF04851 Type III restriction enzyme, res subunit CEA93_RS04195 PF02384 N-6 DNA Methylase CEA93_RS04195 PF12161 HsdM N-terminal domain CEA93_RS04200 PF00589 Phage integrase family CEA93_RS04200 PF13356 Arm DNA-binding domain CEA93_RS04210 PF01668 SmpB protein CEA93_RS04215 PF03364 Polyketide cyclase / dehydrase and lipid transport CEA93_RS04220 PF03658 RnfH family Ubiquitin CEA93_RS04225 PF04355 SmpA / OmlA family CEA93_RS04230 PF02463 RecF/RecN/SMC N terminal domain CEA93_RS04235 PF01212 Beta-eliminating lyase CEA93_RS04240 PF01513 ATP-NAD kinase CEA93_RS04245 PF01025 GrpE CEA93_RS04250 PF00012 Hsp70 protein CEA93_RS04255 PF00684 DnaJ central domain CEA93_RS04255 PF01556 DnaJ C terminal domain CEA93_RS04255 PF00226 DnaJ domain CEA93_RS04260 PF07963 Prokaryotic N-terminal methylation motif CEA93_RS04260 PF00114 Pilin (bacterial filament) CEA93_RS04285 PF03806 AbgT putative transporter family CEA93_RS04290 PF00756 Putative esterase CEA93_RS04295 PF00107 Zinc-binding dehydrogenase CEA93_RS04295 PF08240 Alcohol dehydrogenase GroES-like domain CEA93_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS04300 PF03466 LysR substrate binding domain CEA93_RS04305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEA93_RS04310 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS04310 PF01464 Transglycosylase SLT domain CEA93_RS04320 PF02769 AIR synthase related protein, C-terminal domain CEA93_RS04320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CEA93_RS04320 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CEA93_RS04335 PF06786 Uncharacterised protein family (UPF0253) CEA93_RS04340 PF04391 Protein of unknown function (DUF533) CEA93_RS04345 PF03129 Anticodon binding domain CEA93_RS04345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEA93_RS04345 PF04073 Aminoacyl-tRNA editing domain CEA93_RS04350 PF01980 tRNA-methyltransferase O CEA93_RS04350 PF18389 TrmO C-terminal domain CEA93_RS04355 PF01197 Ribosomal protein L31 CEA93_RS04360 PF00444 Ribosomal protein L36 CEA93_RS04365 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CEA93_RS04390 PF04287 tRNA pseudouridine synthase C CEA93_RS04395 PF00849 RNA pseudouridylate synthase CEA93_RS04400 PF02780 Transketolase, C-terminal domain CEA93_RS04400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CEA93_RS04400 PF02779 Transketolase, pyrimidine binding domain CEA93_RS04405 PF00348 Polyprenyl synthetase CEA93_RS04410 PF02609 Exonuclease VII small subunit CEA93_RS04415 PF01618 MotA/TolQ/ExbB proton channel family CEA93_RS04420 PF00691 OmpA family CEA93_RS04420 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEA93_RS04425 PF02926 THUMP domain CEA93_RS04425 PF02568 Thiamine biosynthesis protein (ThiI) CEA93_RS04430 PF03466 LysR substrate binding domain CEA93_RS04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS04435 PF04241 Protein of unknown function (DUF423) CEA93_RS04440 PF01728 FtsJ-like methyltransferase CEA93_RS04440 PF18125 RlmM ferredoxin-like domain CEA93_RS04445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEA93_RS04445 PF01367 5'-3' exonuclease, C-terminal SAM fold CEA93_RS04450 PF11892 Domain of unknown function (DUF3412) CEA93_RS04450 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CEA93_RS04450 PF03641 Possible lysine decarboxylase CEA93_RS04455 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS04465 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CEA93_RS04465 PF14489 QueF-like protein CEA93_RS04470 PF07348 Syd protein (SUKH-2) CEA93_RS04475 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CEA93_RS04480 PF03180 NLPA lipoprotein CEA93_RS04485 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS04490 PF09383 NIL domain CEA93_RS04490 PF00005 ABC transporter CEA93_RS04505 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS04510 PF00367 phosphotransferase system, EIIB CEA93_RS04510 PF02378 Phosphotransferase system, EIIC CEA93_RS04515 PF16657 Maltogenic Amylase, C-terminal domain CEA93_RS04515 PF00128 Alpha amylase, catalytic domain CEA93_RS04520 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS04520 PF00072 Response regulator receiver domain CEA93_RS04525 PF00672 HAMP domain CEA93_RS04525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS04525 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS04560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS04565 PF00873 AcrB/AcrD/AcrF family CEA93_RS04570 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEA93_RS04575 PF02350 UDP-N-acetylglucosamine 2-epimerase CEA93_RS04580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEA93_RS04580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEA93_RS04580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEA93_RS04585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEA93_RS04585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEA93_RS04585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEA93_RS04620 PF06426 Serine acetyltransferase, N-terminal CEA93_RS04620 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS04630 PF03808 Glycosyl transferase WecB/TagA/CpsF family CEA93_RS04635 PF17945 Beta/Gamma crystallin CEA93_RS04635 PF12561 ToxR activated gene A lipoprotein domain CEA93_RS04660 PF13614 AAA domain CEA93_RS04665 PF02563 Polysaccharide biosynthesis/export protein CEA93_RS04665 PF10531 SLBB domain CEA93_RS04665 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEA93_RS04675 PF02397 Bacterial sugar transferase CEA93_RS04685 PF00464 Serine hydroxymethyltransferase CEA93_RS04695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CEA93_RS04695 PF04055 Radical SAM superfamily CEA93_RS04700 PF03099 Biotin/lipoate A/B protein ligase family CEA93_RS04705 PF04359 Protein of unknown function (DUF493) CEA93_RS04710 PF00768 D-alanyl-D-alanine carboxypeptidase CEA93_RS04710 PF07943 Penicillin-binding protein 5, C-terminal domain CEA93_RS04715 PF05036 Sporulation related domain CEA93_RS04715 PF03330 Lytic transglycolase CEA93_RS04720 PF01098 Cell cycle protein CEA93_RS04725 PF03717 Penicillin-binding Protein dimerisation domain CEA93_RS04725 PF00905 Penicillin binding protein transpeptidase domain CEA93_RS04730 PF02590 Predicted SPOUT methyltransferase CEA93_RS04740 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CEA93_RS04740 PF06144 DNA polymerase III, delta subunit CEA93_RS04745 PF04390 Lipopolysaccharide-assembly CEA93_RS04750 PF13603 Leucyl-tRNA synthetase, Domain 2 CEA93_RS04750 PF00133 tRNA synthetases class I (I, L, M and V) CEA93_RS04750 PF08264 Anticodon-binding domain of tRNA CEA93_RS04755 PF07295 Zinc-ribbon containing domain CEA93_RS04760 PF00795 Carbon-nitrogen hydrolase CEA93_RS04765 PF03471 Transporter associated domain CEA93_RS04765 PF00571 CBS domain CEA93_RS04770 PF02130 Uncharacterized protein family UPF0054 CEA93_RS04775 PF02562 PhoH-like protein CEA93_RS04780 PF04055 Radical SAM superfamily CEA93_RS04780 PF01938 TRAM domain CEA93_RS04780 PF00919 Uncharacterized protein family UPF0004 CEA93_RS04785 PF01494 FAD binding domain CEA93_RS04790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEA93_RS04795 PF02896 PEP-utilising enzyme, TIM barrel domain CEA93_RS04795 PF05524 PEP-utilising enzyme, N-terminal CEA93_RS04795 PF00391 PEP-utilising enzyme, mobile domain CEA93_RS04800 PF00381 PTS HPr component phosphorylation site CEA93_RS04805 PF00291 Pyridoxal-phosphate dependent enzyme CEA93_RS04815 PF04354 ZipA, C-terminal FtsZ-binding domain CEA93_RS04820 PF12826 Helix-hairpin-helix motif CEA93_RS04820 PF00533 BRCA1 C Terminus (BRCT) domain CEA93_RS04820 PF03120 NAD-dependent DNA ligase OB-fold domain CEA93_RS04820 PF01653 NAD-dependent DNA ligase adenylation domain CEA93_RS04820 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CEA93_RS04825 PF13609 Gram-negative porin CEA93_RS04830 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CEA93_RS04835 PF14319 Transposase zinc-binding domain CEA93_RS04835 PF04986 Putative transposase CEA93_RS04840 PF13411 MerR HTH family regulatory protein CEA93_RS04850 PF01145 SPFH domain / Band 7 family CEA93_RS04850 PF16200 C-terminal region of band_7 CEA93_RS04855 PF00085 Thioredoxin CEA93_RS04860 PF08338 Domain of unknown function (DUF1731) CEA93_RS04860 PF01370 NAD dependent epimerase/dehydratase family CEA93_RS04865 PF12850 Calcineurin-like phosphoesterase superfamily domain CEA93_RS04875 PF17323 Trans-membrane regulatory protein ToxS CEA93_RS04880 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS04885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS04885 PF00183 Hsp90 protein CEA93_RS04890 PF05191 Adenylate kinase, active site lid CEA93_RS04895 PF00762 Ferrochelatase CEA93_RS04900 PF00854 POT family CEA93_RS04905 PF02357 Transcription termination factor nusG CEA93_RS04910 PF13537 Glutamine amidotransferase domain CEA93_RS04910 PF00733 Asparagine synthase CEA93_RS04915 PF00999 Sodium/hydrogen exchanger family CEA93_RS04915 PF02254 TrkA-N domain CEA93_RS04920 PF01047 MarR family CEA93_RS04920 PF00480 ROK family CEA93_RS04925 PF01979 Amidohydrolase family CEA93_RS04930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEA93_RS04930 PF00367 phosphotransferase system, EIIB CEA93_RS04930 PF02378 Phosphotransferase system, EIIC CEA93_RS04935 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CEA93_RS04935 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEA93_RS04945 PF01416 tRNA pseudouridine synthase CEA93_RS04950 PF01039 Carboxyl transferase domain CEA93_RS04950 PF17848 Acetyl-coA carboxylase zinc finger domain CEA93_RS04955 PF08245 Mur ligase middle domain CEA93_RS04955 PF02875 Mur ligase family, glutamate ligase domain CEA93_RS04960 PF05036 Sporulation related domain CEA93_RS04965 PF02674 Colicin V production protein CEA93_RS04970 PF00156 Phosphoribosyl transferase domain CEA93_RS04975 PF13726 Na+-H+ antiporter family CEA93_RS04975 PF03553 Na+/H+ antiporter family CEA93_RS04980 PF00929 Exonuclease CEA93_RS04985 PF18393 MotY N-terminal domain CEA93_RS04985 PF00691 OmpA family CEA93_RS04990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEA93_RS04995 PF00633 Helix-hairpin-helix motif CEA93_RS04995 PF10576 Iron-sulfur binding domain of endonuclease III CEA93_RS04995 PF00730 HhH-GPD superfamily base excision DNA repair protein CEA93_RS05000 PF02508 Rnf-Nqr subunit, membrane protein CEA93_RS05005 PF04205 FMN-binding domain CEA93_RS05010 PF03116 NQR2, RnfD, RnfE family CEA93_RS05015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEA93_RS05015 PF12838 4Fe-4S dicluster domain CEA93_RS05015 PF13375 RnfC Barrel sandwich hybrid domain CEA93_RS05015 PF10531 SLBB domain CEA93_RS05020 PF04060 Putative Fe-S cluster CEA93_RS05025 PF02508 Rnf-Nqr subunit, membrane protein CEA93_RS05030 PF01648 4'-phosphopantetheinyl transferase superfamily CEA93_RS05030 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CEA93_RS05035 PF07715 TonB-dependent Receptor Plug Domain CEA93_RS05040 PF00756 Putative esterase CEA93_RS05040 PF11806 Domain of unknown function (DUF3327) CEA93_RS05050 PF00975 Thioesterase domain CEA93_RS05050 PF00501 AMP-binding enzyme CEA93_RS05050 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS05050 PF00668 Condensation domain CEA93_RS05050 PF00550 Phosphopantetheine attachment site CEA93_RS05055 PF04986 Putative transposase CEA93_RS05055 PF14319 Transposase zinc-binding domain CEA93_RS05060 PF00550 Phosphopantetheine attachment site CEA93_RS05060 PF00501 AMP-binding enzyme CEA93_RS05060 PF00668 Condensation domain CEA93_RS05060 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS05065 PF05977 Transmembrane secretion effector CEA93_RS05070 PF00857 Isochorismatase family CEA93_RS05070 PF00550 Phosphopantetheine attachment site CEA93_RS05075 PF00501 AMP-binding enzyme CEA93_RS05075 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS05080 PF00425 chorismate binding enzyme CEA93_RS05090 PF00793 DAHP synthetase I family CEA93_RS05095 PF00759 Glycosyl hydrolase family 9 CEA93_RS05095 PF02927 Cellulase N-terminal ig-like domain CEA93_RS05095 PF02018 Carbohydrate binding domain CEA93_RS05105 PF02151 UvrB/uvrC motif CEA93_RS05105 PF00271 Helicase conserved C-terminal domain CEA93_RS05105 PF12344 Ultra-violet resistance protein B CEA93_RS05105 PF17757 UvrB interaction domain CEA93_RS05105 PF04851 Type III restriction enzyme, res subunit CEA93_RS05110 PF00158 Sigma-54 interaction domain CEA93_RS05110 PF00072 Response regulator receiver domain CEA93_RS05110 PF02954 Bacterial regulatory protein, Fis family CEA93_RS05115 PF01627 Hpt domain CEA93_RS05120 PF01933 Uncharacterised protein family UPF0052 CEA93_RS05125 PF06463 Molybdenum Cofactor Synthesis C CEA93_RS05125 PF04055 Radical SAM superfamily CEA93_RS05130 PF00994 Probable molybdopterin binding domain CEA93_RS05135 PF01967 MoaC family CEA93_RS05140 PF02597 ThiS family CEA93_RS05145 PF02391 MoaE protein CEA93_RS05150 PF07694 5TMR of 5TMR-LYT CEA93_RS05150 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS05155 PF01743 Poly A polymerase head domain CEA93_RS05155 PF00571 CBS domain CEA93_RS05160 PF00403 Heavy-metal-associated domain CEA93_RS05165 PF01048 Phosphorylase superfamily CEA93_RS05175 PF09334 tRNA synthetases class I (M) CEA93_RS05175 PF01588 Putative tRNA binding domain CEA93_RS05180 PF10609 NUBPL iron-transfer P-loop NTPase CEA93_RS05185 PF00485 Phosphoribulokinase / Uridine kinase family CEA93_RS05190 PF05170 AsmA family CEA93_RS05195 PF12557 Cob(I)alamin adenosyltransferase N terminal CEA93_RS05195 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CEA93_RS05200 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEA93_RS05205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEA93_RS05215 PF04542 Sigma-70 region 2 CEA93_RS05215 PF08281 Sigma-70, region 4 CEA93_RS05230 PF00108 Thiolase, N-terminal domain CEA93_RS05230 PF02803 Thiolase, C-terminal domain CEA93_RS05235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEA93_RS05235 PF00378 Enoyl-CoA hydratase/isomerase CEA93_RS05235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEA93_RS05240 PF00881 Nitroreductase family CEA93_RS05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS05245 PF03466 LysR substrate binding domain CEA93_RS05250 PF00072 Response regulator receiver domain CEA93_RS05260 PF04304 Protein of unknown function (DUF454) CEA93_RS05265 PF00156 Phosphoribosyl transferase domain CEA93_RS05270 PF12170 DNA polymerase III tau subunit V interacting with alpha CEA93_RS05270 PF12169 DNA polymerase III subunits gamma and tau domain III CEA93_RS05270 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CEA93_RS05275 PF02575 YbaB/EbfC DNA-binding family CEA93_RS05280 PF13662 Toprim domain CEA93_RS05280 PF02132 RecR protein CEA93_RS05285 PF03692 Putative zinc- or iron-chelating domain CEA93_RS05290 PF03692 Putative zinc- or iron-chelating domain CEA93_RS05305 PF13847 Methyltransferase domain CEA93_RS05310 PF01263 Aldose 1-epimerase CEA93_RS05315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEA93_RS05315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEA93_RS05320 PF01641 SelR domain CEA93_RS05330 PF07023 Protein of unknown function (DUF1315) CEA93_RS05335 PF17763 Glutaminase/Asparaginase C-terminal domain CEA93_RS05335 PF00710 Asparaginase, N-terminal CEA93_RS05340 PF01343 Peptidase family S49 CEA93_RS05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS05345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEA93_RS05350 PF00551 Formyl transferase CEA93_RS05350 PF01842 ACT domain CEA93_RS05360 PF13307 Helicase C-terminal domain CEA93_RS05360 PF04851 Type III restriction enzyme, res subunit CEA93_RS05365 PF00814 Glycoprotease family CEA93_RS05380 PF00561 alpha/beta hydrolase fold CEA93_RS05385 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS05385 PF00501 AMP-binding enzyme CEA93_RS05390 PF00570 HRDC domain CEA93_RS05390 PF01612 3'-5' exonuclease CEA93_RS05395 PF03776 Septum formation topological specificity factor MinE CEA93_RS05400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEA93_RS05405 PF03775 Septum formation inhibitor MinC, C-terminal domain CEA93_RS05405 PF05209 Septum formation inhibitor MinC, N-terminal domain CEA93_RS05410 PF05166 YcgL domain CEA93_RS05415 PF13406 Transglycosylase SLT domain CEA93_RS05420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS05420 PF03466 LysR substrate binding domain CEA93_RS05425 PF07662 Na+ dependent nucleoside transporter C-terminus CEA93_RS05425 PF07670 Nucleoside recognition CEA93_RS05425 PF01773 Na+ dependent nucleoside transporter N-terminus CEA93_RS05430 PF00704 Glycosyl hydrolases family 18 CEA93_RS05430 PF06483 Chitinase C CEA93_RS05435 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEA93_RS05435 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEA93_RS05450 PF09905 DNA-binding protein VF530 CEA93_RS05460 PF00809 Pterin binding enzyme CEA93_RS05460 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEA93_RS05460 PF02607 B12 binding domain CEA93_RS05460 PF02574 Homocysteine S-methyltransferase CEA93_RS05460 PF02310 B12 binding domain CEA93_RS05465 PF02028 BCCT, betaine/carnitine/choline family transporter CEA93_RS05470 PF00128 Alpha amylase, catalytic domain CEA93_RS05470 PF16657 Maltogenic Amylase, C-terminal domain CEA93_RS05470 PF02903 Alpha amylase, N-terminal ig-like domain CEA93_RS05475 PF00270 DEAD/DEAH box helicase CEA93_RS05475 PF00271 Helicase conserved C-terminal domain CEA93_RS05485 PF03313 Serine dehydratase alpha chain CEA93_RS05485 PF03315 Serine dehydratase beta chain CEA93_RS05490 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CEA93_RS05495 PF00072 Response regulator receiver domain CEA93_RS05495 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS05500 PF00672 HAMP domain CEA93_RS05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS05500 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS05505 PF01547 Bacterial extracellular solute-binding protein CEA93_RS05515 PF03480 Bacterial extracellular solute-binding protein, family 7 CEA93_RS05520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEA93_RS05525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEA93_RS05530 PF00072 Response regulator receiver domain CEA93_RS05530 PF02954 Bacterial regulatory protein, Fis family CEA93_RS05530 PF00158 Sigma-54 interaction domain CEA93_RS05535 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS05535 PF02743 Cache domain CEA93_RS05545 PF05697 Bacterial trigger factor protein (TF) CEA93_RS05545 PF05698 Bacterial trigger factor protein (TF) C-terminus CEA93_RS05545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEA93_RS05550 PF00574 Clp protease CEA93_RS05555 PF07724 AAA domain (Cdc48 subfamily) CEA93_RS05555 PF06689 ClpX C4-type zinc finger CEA93_RS05555 PF10431 C-terminal, D2-small domain, of ClpB protein CEA93_RS05560 PF05362 Lon protease (S16) C-terminal proteolytic domain CEA93_RS05560 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS05560 PF02190 ATP-dependent protease La (LON) substrate-binding domain CEA93_RS05565 PF00216 Bacterial DNA-binding protein CEA93_RS05570 PF13145 PPIC-type PPIASE domain CEA93_RS05580 PF02224 Cytidylate kinase CEA93_RS05585 PF00575 S1 RNA binding domain CEA93_RS05590 PF00216 Bacterial DNA-binding protein CEA93_RS05595 PF06305 Lipopolysaccharide assembly protein A domain CEA93_RS05600 PF18073 Rubredoxin metal binding domain CEA93_RS05605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEA93_RS05615 PF03466 LysR substrate binding domain CEA93_RS05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS05625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEA93_RS05625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEA93_RS05630 PF01037 Lrp/AsnC ligand binding domain CEA93_RS05635 PF01580 FtsK/SpoIIIE family CEA93_RS05635 PF09397 Ftsk gamma domain CEA93_RS05635 PF17854 FtsK alpha domain CEA93_RS05635 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CEA93_RS05645 PF01435 Peptidase family M48 CEA93_RS05655 PF00106 short chain dehydrogenase CEA93_RS05680 PF16036 Chalcone isomerase-like CEA93_RS05690 PF11842 Domain of unknown function (DUF3362) CEA93_RS05690 PF08497 Radical SAM N-terminal CEA93_RS05690 PF04055 Radical SAM superfamily CEA93_RS05695 PF00089 Trypsin CEA93_RS05700 PF00563 EAL domain CEA93_RS05700 PF01590 GAF domain CEA93_RS05700 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS05700 PF00989 PAS fold CEA93_RS05715 PF03466 LysR substrate binding domain CEA93_RS05715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS05720 PF01717 Cobalamin-independent synthase, Catalytic domain CEA93_RS05720 PF08267 Cobalamin-independent synthase, N-terminal domain CEA93_RS05730 PF03795 YCII-related domain CEA93_RS05735 PF03061 Thioesterase superfamily CEA93_RS05740 PF04279 Intracellular septation protein A CEA93_RS05750 PF00375 Sodium:dicarboxylate symporter family CEA93_RS05760 PF00290 Tryptophan synthase alpha chain CEA93_RS05765 PF00291 Pyridoxal-phosphate dependent enzyme CEA93_RS05770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CEA93_RS05770 PF00218 Indole-3-glycerol phosphate synthase CEA93_RS05775 PF00591 Glycosyl transferase family, a/b domain CEA93_RS05775 PF02885 Glycosyl transferase family, helical bundle domain CEA93_RS05780 PF00117 Glutamine amidotransferase class-I CEA93_RS05785 PF04715 Anthranilate synthase component I, N terminal region CEA93_RS05785 PF00425 chorismate binding enzyme CEA93_RS05790 PF08056 Tryptophan operon leader peptide CEA93_RS05795 PF02811 PHP domain CEA93_RS05800 PF01300 Telomere recombination CEA93_RS05805 PF01479 S4 domain CEA93_RS05805 PF00849 RNA pseudouridylate synthase CEA93_RS05810 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS05810 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS05810 PF00563 EAL domain CEA93_RS05820 PF08281 Sigma-70, region 4 CEA93_RS05820 PF04542 Sigma-70 region 2 CEA93_RS05835 PF00005 ABC transporter CEA93_RS05835 PF00664 ABC transporter transmembrane region CEA93_RS05840 PF00664 ABC transporter transmembrane region CEA93_RS05840 PF00005 ABC transporter CEA93_RS05845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS05850 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS05850 PF00072 Response regulator receiver domain CEA93_RS05860 PF00266 Aminotransferase class-V CEA93_RS05865 PF02698 DUF218 domain CEA93_RS05875 PF00390 Malic enzyme, N-terminal domain CEA93_RS05875 PF03949 Malic enzyme, NAD binding domain CEA93_RS05885 PF01259 SAICAR synthetase CEA93_RS05890 PF02080 TrkA-C domain CEA93_RS05890 PF06826 Predicted Permease Membrane Region CEA93_RS05895 PF00462 Glutaredoxin CEA93_RS05900 PF00465 Iron-containing alcohol dehydrogenase CEA93_RS05905 PF01418 Helix-turn-helix domain, rpiR family CEA93_RS05905 PF01380 SIS domain CEA93_RS05910 PF00282 Pyridoxal-dependent decarboxylase conserved domain CEA93_RS05920 PF03956 Lysine exporter LysO CEA93_RS05930 PF04994 TfoX C-terminal domain CEA93_RS05930 PF04993 TfoX N-terminal domain CEA93_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS05945 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS05945 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS05955 PF00266 Aminotransferase class-V CEA93_RS05960 PF00206 Lyase CEA93_RS05960 PF08328 Adenylosuccinate lyase C-terminal CEA93_RS05965 PF04356 Protein of unknown function (DUF489) CEA93_RS05980 PF00294 pfkB family carbohydrate kinase CEA93_RS05985 PF00816 H-NS histone family CEA93_RS05990 PF03553 Na+/H+ antiporter family CEA93_RS05995 PF01634 ATP phosphoribosyltransferase CEA93_RS05995 PF08029 HisG, C-terminal domain CEA93_RS06000 PF00815 Histidinol dehydrogenase CEA93_RS06005 PF00155 Aminotransferase class I and II CEA93_RS06010 PF08645 Polynucleotide kinase 3 phosphatase CEA93_RS06010 PF00475 Imidazoleglycerol-phosphate dehydratase CEA93_RS06015 PF00117 Glutamine amidotransferase class-I CEA93_RS06020 PF00977 Histidine biosynthesis protein CEA93_RS06025 PF00977 Histidine biosynthesis protein CEA93_RS06030 PF01502 Phosphoribosyl-AMP cyclohydrolase CEA93_RS06030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CEA93_RS06035 PF00849 RNA pseudouridylate synthase CEA93_RS06040 PF03971 Monomeric isocitrate dehydrogenase CEA93_RS06045 PF00313 'Cold-shock' DNA-binding domain CEA93_RS06050 PF02617 ATP-dependent Clp protease adaptor protein ClpS CEA93_RS06055 PF10431 C-terminal, D2-small domain, of ClpB protein CEA93_RS06055 PF17871 AAA lid domain CEA93_RS06055 PF07724 AAA domain (Cdc48 subfamily) CEA93_RS06055 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS06055 PF02861 Clp amino terminal domain, pathogenicity island component CEA93_RS06060 PF01176 Translation initiation factor 1A / IF-1 CEA93_RS06065 PF04377 Arginine-tRNA-protein transferase, C terminus CEA93_RS06065 PF04376 Arginine-tRNA-protein transferase, N terminus CEA93_RS06070 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CEA93_RS06075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEA93_RS06080 PF10692 Protein of unknown function (DUF2498) CEA93_RS06085 PF01131 DNA topoisomerase CEA93_RS06085 PF01396 Topoisomerase DNA binding C4 zinc finger CEA93_RS06085 PF01751 Toprim domain CEA93_RS06085 PF08272 Topoisomerase I zinc-ribbon-like CEA93_RS06090 PF00483 Nucleotidyl transferase CEA93_RS06095 PF00534 Glycosyl transferases group 1 CEA93_RS06095 PF08323 Starch synthase catalytic domain CEA93_RS06115 PF04993 TfoX N-terminal domain CEA93_RS06115 PF04994 TfoX C-terminal domain CEA93_RS06120 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS06125 PF02613 Nitrate reductase delta subunit CEA93_RS06130 PF00072 Response regulator receiver domain CEA93_RS06130 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS06135 PF02698 DUF218 domain CEA93_RS06140 PF13847 Methyltransferase domain CEA93_RS06145 PF17193 MukF C-terminal domain CEA93_RS06145 PF17192 MukF middle domain CEA93_RS06145 PF03882 MukF winged-helix domain CEA93_RS06150 PF04288 MukE-like family CEA93_RS06155 PF04310 MukB N-terminal CEA93_RS06155 PF16330 MukB hinge domain CEA93_RS06170 PF08443 RimK-like ATP-grasp domain CEA93_RS06170 PF18030 RimK PreATP-grasp domain CEA93_RS06175 PF08003 Protein of unknown function (DUF1698) CEA93_RS06180 PF13649 Methyltransferase domain CEA93_RS06185 PF05925 Enterobacterial virulence protein IpgD CEA93_RS06190 PF01904 Protein of unknown function DUF72 CEA93_RS06195 PF01336 OB-fold nucleic acid binding domain CEA93_RS06195 PF00152 tRNA synthetases class II (D, K and N) CEA93_RS06195 PF02938 GAD domain CEA93_RS06200 PF00265 Thymidine kinase CEA93_RS06205 PF02698 DUF218 domain CEA93_RS06215 PF03466 LysR substrate binding domain CEA93_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS06230 PF01226 Formate/nitrite transporter CEA93_RS06235 PF06796 Periplasmic nitrate reductase protein NapE CEA93_RS06240 PF03264 NapC/NirT cytochrome c family, N-terminal region CEA93_RS06245 PF18364 Molybdopterin oxidoreductase N-terminal domain CEA93_RS06245 PF01568 Molydopterin dinucleotide binding domain CEA93_RS06245 PF00384 Molybdopterin oxidoreductase CEA93_RS06255 PF02833 DHHA2 domain CEA93_RS06255 PF01368 DHH family CEA93_RS06270 PF00005 ABC transporter CEA93_RS06275 PF00005 ABC transporter CEA93_RS06275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEA93_RS06280 PF12911 N-terminal TM domain of oligopeptide transport permease C CEA93_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS06290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEA93_RS06295 PF00158 Sigma-54 interaction domain CEA93_RS06295 PF02954 Bacterial regulatory protein, Fis family CEA93_RS06300 PF04012 PspA/IM30 family CEA93_RS06305 PF06667 Phage shock protein B CEA93_RS06315 PF00117 Glutamine amidotransferase class-I CEA93_RS06315 PF03352 Methyladenine glycosylase CEA93_RS06315 PF13302 Acetyltransferase (GNAT) domain CEA93_RS06315 PF00958 GMP synthase C terminal domain CEA93_RS06315 PF13673 Acetyltransferase (GNAT) domain CEA93_RS06320 PF01053 Cys/Met metabolism PLP-dependent enzyme CEA93_RS06325 PF13396 Phospholipase_D-nuclease N-terminal CEA93_RS06325 PF13091 PLD-like domain CEA93_RS06330 PF00209 Sodium:neurotransmitter symporter family CEA93_RS06335 PF00849 RNA pseudouridylate synthase CEA93_RS06350 PF01066 CDP-alcohol phosphatidyltransferase CEA93_RS06355 PF00005 ABC transporter CEA93_RS06360 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS06365 PF13416 Bacterial extracellular solute-binding protein CEA93_RS06375 PF06945 Protein of unknown function (DUF1289) CEA93_RS06385 PF02872 5'-nucleotidase, C-terminal domain CEA93_RS06385 PF00149 Calcineurin-like phosphoesterase CEA93_RS06390 PF13737 Transposase DDE domain CEA93_RS06405 PF00270 DEAD/DEAH box helicase CEA93_RS06405 PF00271 Helicase conserved C-terminal domain CEA93_RS06420 PF01386 Ribosomal L25p family CEA93_RS06425 PF00672 HAMP domain CEA93_RS06425 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS06430 PF00072 Response regulator receiver domain CEA93_RS06430 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS06440 PF04851 Type III restriction enzyme, res subunit CEA93_RS06440 PF00271 Helicase conserved C-terminal domain CEA93_RS06445 PF00849 RNA pseudouridylate synthase CEA93_RS06445 PF01479 S4 domain CEA93_RS06450 PF07690 Major Facilitator Superfamily CEA93_RS06460 PF11066 Protein of unknown function (DUF2867) CEA93_RS06460 PF13460 NAD(P)H-binding CEA93_RS06465 PF01554 MatE CEA93_RS06470 PF00005 ABC transporter CEA93_RS06485 PF06965 Na+/H+ antiporter 1 CEA93_RS06495 PF00202 Aminotransferase class-III CEA93_RS06500 PF03435 Saccharopine dehydrogenase NADP binding domain CEA93_RS06500 PF16653 Saccharopine dehydrogenase C-terminal domain CEA93_RS06510 PF17200 Single Cache domain 2 CEA93_RS06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS06510 PF00672 HAMP domain CEA93_RS06525 PF00994 Probable molybdopterin binding domain CEA93_RS06535 PF00970 Oxidoreductase FAD-binding domain CEA93_RS06535 PF00111 2Fe-2S iron-sulfur cluster binding domain CEA93_RS06535 PF00175 Oxidoreductase NAD-binding domain CEA93_RS06540 PF00268 Ribonucleotide reductase, small chain CEA93_RS06545 PF00317 Ribonucleotide reductase, all-alpha domain CEA93_RS06545 PF02867 Ribonucleotide reductase, barrel domain CEA93_RS06545 PF03477 ATP cone domain CEA93_RS06555 PF00521 DNA gyrase/topoisomerase IV, subunit A CEA93_RS06555 PF03989 DNA gyrase C-terminal domain, beta-propeller CEA93_RS06560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS06560 PF12729 Four helix bundle sensory module for signal transduction CEA93_RS06560 PF00672 HAMP domain CEA93_RS06575 PF01970 Tripartite tricarboxylate transporter TctA family CEA93_RS06580 PF08218 Citrate lyase ligase C-terminal domain CEA93_RS06585 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CEA93_RS06595 PF02436 Conserved carboxylase domain CEA93_RS06595 PF00364 Biotin-requiring enzyme CEA93_RS06595 PF00682 HMGL-like CEA93_RS06600 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CEA93_RS06605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS06605 PF17203 Single cache domain 3 CEA93_RS06610 PF12431 Transcriptional regulator CEA93_RS06610 PF00072 Response regulator receiver domain CEA93_RS06615 PF06857 Malonate decarboxylase delta subunit (MdcD) CEA93_RS06620 PF03328 HpcH/HpaI aldolase/citrate lyase family CEA93_RS06625 PF04223 Citrate lyase, alpha subunit (CitF) CEA93_RS06630 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CEA93_RS06635 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CEA93_RS06655 PF01238 Phosphomannose isomerase type I CEA93_RS06660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEA93_RS06660 PF02378 Phosphotransferase system, EIIC CEA93_RS06660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEA93_RS06665 PF12833 Helix-turn-helix domain CEA93_RS06675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEA93_RS06685 PF02001 Protein of unknown function DUF134 CEA93_RS06700 PF13407 Periplasmic binding protein domain CEA93_RS06705 PF00005 ABC transporter CEA93_RS06710 PF02653 Branched-chain amino acid transport system / permease component CEA93_RS06715 PF03466 LysR substrate binding domain CEA93_RS06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS06720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEA93_RS06725 PF01219 Prokaryotic diacylglycerol kinase CEA93_RS06730 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS06730 PF00672 HAMP domain CEA93_RS06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS06735 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS06735 PF00072 Response regulator receiver domain CEA93_RS06740 PF01970 Tripartite tricarboxylate transporter TctA family CEA93_RS06770 PF00285 Citrate synthase, C-terminal domain CEA93_RS06775 PF00330 Aconitase family (aconitate hydratase) CEA93_RS06775 PF00694 Aconitase C-terminal domain CEA93_RS06780 PF04303 PrpF protein CEA93_RS06785 PF00501 AMP-binding enzyme CEA93_RS06785 PF16177 Acetyl-coenzyme A synthetase N-terminus CEA93_RS06785 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS06805 PF04055 Radical SAM superfamily CEA93_RS06810 PF06508 Queuosine biosynthesis protein QueC CEA93_RS06835 PF17785 PUA-like domain CEA93_RS06835 PF10672 S-adenosylmethionine-dependent methyltransferase CEA93_RS06840 PF04986 Putative transposase CEA93_RS06840 PF14319 Transposase zinc-binding domain CEA93_RS06845 PF10672 S-adenosylmethionine-dependent methyltransferase CEA93_RS06845 PF17785 PUA-like domain CEA93_RS06850 PF00708 Acylphosphatase CEA93_RS06855 PF04358 DsrC like protein CEA93_RS06860 PF01027 Inhibitor of apoptosis-promoting Bax1 CEA93_RS06865 PF00005 ABC transporter CEA93_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS06875 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS06880 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS06885 PF10414 Sirohaem synthase dimerisation region CEA93_RS06885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEA93_RS06885 PF14824 Sirohaem biosynthesis protein central CEA93_RS06895 PF04461 Protein of unknown function (DUF520) CEA93_RS06900 PF00793 DAHP synthetase I family CEA93_RS06905 PF02896 PEP-utilising enzyme, TIM barrel domain CEA93_RS06905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEA93_RS06905 PF00391 PEP-utilising enzyme, mobile domain CEA93_RS06920 PF13509 S1 domain CEA93_RS06920 PF17783 CvfB-like winged helix domain CEA93_RS06925 PF01189 16S rRNA methyltransferase RsmB/F CEA93_RS06925 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CEA93_RS06925 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CEA93_RS06930 PF02470 MlaD protein CEA93_RS06935 PF04403 Paraquat-inducible protein A CEA93_RS06940 PF00664 ABC transporter transmembrane region CEA93_RS06940 PF00005 ABC transporter CEA93_RS06945 PF13185 GAF domain CEA93_RS06950 PF17516 ProQ C-terminal domain CEA93_RS06950 PF04352 ProQ/FINO family CEA93_RS06955 PF03572 Peptidase family S41 CEA93_RS06955 PF17804 Tail specific protease N-terminal domain CEA93_RS06955 PF00595 PDZ domain CEA93_RS06955 PF11818 C-terminal domain of tail specific protease (DUF3340) CEA93_RS06965 PF11940 Domain of unknown function (DUF3458) Ig-like fold CEA93_RS06965 PF01433 Peptidase family M1 domain CEA93_RS06965 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CEA93_RS06975 PF05088 Bacterial NAD-glutamate dehydrogenase CEA93_RS06980 PF01180 Dihydroorotate dehydrogenase CEA93_RS06985 PF07126 Cell-division protein ZapC CEA93_RS07000 PF16326 ABC transporter C-terminal domain CEA93_RS07000 PF00005 ABC transporter CEA93_RS07000 PF12848 ABC transporter CEA93_RS07010 PF04957 Ribosome modulation factor CEA93_RS07015 PF07977 FabA-like domain CEA93_RS07020 PF05362 Lon protease (S16) C-terminal proteolytic domain CEA93_RS07020 PF13654 AAA domain CEA93_RS07025 PF06303 MatP N-terminal domain CEA93_RS07025 PF17414 MatP C-terminal ribbon-helix-helix domain CEA93_RS07055 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEA93_RS07070 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CEA93_RS07070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEA93_RS07080 PF00403 Heavy-metal-associated domain CEA93_RS07095 PF13545 Crp-like helix-turn-helix domain CEA93_RS07095 PF00027 Cyclic nucleotide-binding domain CEA93_RS07100 PF00582 Universal stress protein family CEA93_RS07105 PF01171 PP-loop family CEA93_RS07125 PF08402 TOBE domain CEA93_RS07125 PF00005 ABC transporter CEA93_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS07135 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS07140 PF13416 Bacterial extracellular solute-binding protein CEA93_RS07145 PF13416 Bacterial extracellular solute-binding protein CEA93_RS07150 PF02146 Sir2 family CEA93_RS07155 PF00909 Ammonium Transporter Family CEA93_RS07160 PF00005 ABC transporter CEA93_RS07160 PF12848 ABC transporter CEA93_RS07165 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS07165 PF00072 Response regulator receiver domain CEA93_RS07170 PF05231 MASE1 CEA93_RS07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS07170 PF07730 Histidine kinase CEA93_RS07175 PF07690 Major Facilitator Superfamily CEA93_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS07190 PF00005 ABC transporter CEA93_RS07190 PF08402 TOBE domain CEA93_RS07195 PF12804 MobA-like NTP transferase domain CEA93_RS07200 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEA93_RS07210 PF00480 ROK family CEA93_RS07215 PF03942 DTW domain CEA93_RS07225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS07225 PF00672 HAMP domain CEA93_RS07225 PF12729 Four helix bundle sensory module for signal transduction CEA93_RS07230 PF00877 NlpC/P60 family CEA93_RS07240 PF03881 Fructosamine kinase CEA93_RS07250 PF01554 MatE CEA93_RS07255 PF14743 DNA ligase OB-like domain CEA93_RS07255 PF01068 ATP dependent DNA ligase domain CEA93_RS07260 PF01734 Patatin-like phospholipase CEA93_RS07275 PF02472 Biopolymer transport protein ExbD/TolR CEA93_RS07280 PF01618 MotA/TolQ/ExbB proton channel family CEA93_RS07285 PF01618 MotA/TolQ/ExbB proton channel family CEA93_RS07310 PF04389 Peptidase family M28 CEA93_RS07310 PF04151 Bacterial pre-peptidase C-terminal domain CEA93_RS07315 PF14497 Glutathione S-transferase, C-terminal domain CEA93_RS07315 PF02798 Glutathione S-transferase, N-terminal domain CEA93_RS07325 PF04209 homogentisate 1,2-dioxygenase CEA93_RS07330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEA93_RS07335 PF01546 Peptidase family M20/M25/M40 CEA93_RS07335 PF07687 Peptidase dimerisation domain CEA93_RS07350 PF01235 Sodium:alanine symporter family CEA93_RS07355 PF01810 LysE type translocator CEA93_RS07360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CEA93_RS07370 PF13817 IS66 C-terminal element CEA93_RS07370 PF03050 Transposase IS66 family CEA93_RS07370 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS07370 PF13007 Transposase C of IS166 homeodomain CEA93_RS07390 PF00271 Helicase conserved C-terminal domain CEA93_RS07405 PF03050 Transposase IS66 family CEA93_RS07405 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS07405 PF13007 Transposase C of IS166 homeodomain CEA93_RS07405 PF13817 IS66 C-terminal element CEA93_RS07415 PF13737 Transposase DDE domain CEA93_RS07430 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEA93_RS07445 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CEA93_RS07450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEA93_RS07450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEA93_RS07460 PF00171 Aldehyde dehydrogenase family CEA93_RS07470 PF01261 Xylose isomerase-like TIM barrel CEA93_RS07475 PF00294 pfkB family carbohydrate kinase CEA93_RS07480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEA93_RS07480 PF00205 Thiamine pyrophosphate enzyme, central domain CEA93_RS07480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEA93_RS07485 PF04962 KduI/IolB family CEA93_RS07495 PF02811 PHP domain CEA93_RS07495 PF14579 Helix-hairpin-helix motif CEA93_RS07495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEA93_RS07495 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEA93_RS07495 PF00929 Exonuclease CEA93_RS07500 PF01380 SIS domain CEA93_RS07500 PF00571 CBS domain CEA93_RS07505 PF00474 Sodium:solute symporter family CEA93_RS07510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEA93_RS07510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEA93_RS07525 PF07690 Major Facilitator Superfamily CEA93_RS07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS07530 PF03466 LysR substrate binding domain CEA93_RS07540 PF00270 DEAD/DEAH box helicase CEA93_RS07540 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CEA93_RS07540 PF04408 Helicase associated domain (HA2) CEA93_RS07540 PF11898 Domain of unknown function (DUF3418) CEA93_RS07540 PF00271 Helicase conserved C-terminal domain CEA93_RS07560 PF00563 EAL domain CEA93_RS07560 PF08448 PAS fold CEA93_RS07560 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS07575 PF00012 Hsp70 protein CEA93_RS07580 PF00012 Hsp70 protein CEA93_RS07585 PF00465 Iron-containing alcohol dehydrogenase CEA93_RS07610 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS07615 PF00232 Glycosyl hydrolase family 1 CEA93_RS07620 PF00271 Helicase conserved C-terminal domain CEA93_RS07620 PF00270 DEAD/DEAH box helicase CEA93_RS07625 PF00384 Molybdopterin oxidoreductase CEA93_RS07625 PF18364 Molybdopterin oxidoreductase N-terminal domain CEA93_RS07625 PF01568 Molydopterin dinucleotide binding domain CEA93_RS07630 PF03264 NapC/NirT cytochrome c family, N-terminal region CEA93_RS07635 PF00313 'Cold-shock' DNA-binding domain CEA93_RS07645 PF00158 Sigma-54 interaction domain CEA93_RS07645 PF00072 Response regulator receiver domain CEA93_RS07645 PF02954 Bacterial regulatory protein, Fis family CEA93_RS07650 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS07650 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS07655 PF00939 Sodium:sulfate symporter transmembrane region CEA93_RS07660 PF00672 HAMP domain CEA93_RS07660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS07665 PF00842 Alanine racemase, C-terminal domain CEA93_RS07665 PF01168 Alanine racemase, N-terminal domain CEA93_RS07670 PF00892 EamA-like transporter family CEA93_RS07675 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS07685 PF13302 Acetyltransferase (GNAT) domain CEA93_RS07690 PF00158 Sigma-54 interaction domain CEA93_RS07690 PF18024 Helix-turn-helix domain CEA93_RS07695 PF05128 Domain of unknown function (DUF697) CEA93_RS07700 PF04317 YcjX-like family, DUF463 CEA93_RS07715 PF00425 chorismate binding enzyme CEA93_RS07715 PF04715 Anthranilate synthase component I, N terminal region CEA93_RS07720 PF00293 NUDIX domain CEA93_RS07725 PF03222 Tryptophan/tyrosine permease family CEA93_RS07730 PF03313 Serine dehydratase alpha chain CEA93_RS07730 PF03315 Serine dehydratase beta chain CEA93_RS07735 PF12561 ToxR activated gene A lipoprotein domain CEA93_RS07735 PF00041 Fibronectin type III domain CEA93_RS07740 PF04231 Endonuclease I CEA93_RS07745 PF01242 6-pyruvoyl tetrahydropterin synthase CEA93_RS07750 PF00672 HAMP domain CEA93_RS07750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS07750 PF17200 Single Cache domain 2 CEA93_RS07755 PF00152 tRNA synthetases class II (D, K and N) CEA93_RS07755 PF01336 OB-fold nucleic acid binding domain CEA93_RS07765 PF01339 CheB methylesterase CEA93_RS07765 PF00072 Response regulator receiver domain CEA93_RS07770 PF03975 CheD chemotactic sensory transduction CEA93_RS07775 PF03705 CheR methyltransferase, all-alpha domain CEA93_RS07775 PF01739 CheR methyltransferase, SAM binding domain CEA93_RS07780 PF01584 CheW-like domain CEA93_RS07785 PF00672 HAMP domain CEA93_RS07785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS07785 PF12729 Four helix bundle sensory module for signal transduction CEA93_RS07790 PF02895 Signal transducing histidine kinase, homodimeric domain CEA93_RS07790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS07790 PF01627 Hpt domain CEA93_RS07790 PF09078 CheY binding CEA93_RS07790 PF01584 CheW-like domain CEA93_RS07800 PF00072 Response regulator receiver domain CEA93_RS07805 PF12729 Four helix bundle sensory module for signal transduction CEA93_RS07805 PF00672 HAMP domain CEA93_RS07805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS07810 PF01966 HD domain CEA93_RS07810 PF00672 HAMP domain CEA93_RS07815 PF00155 Aminotransferase class I and II CEA93_RS07820 PF00571 CBS domain CEA93_RS07825 PF14579 Helix-hairpin-helix motif CEA93_RS07825 PF00929 Exonuclease CEA93_RS07825 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEA93_RS07825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEA93_RS07825 PF02811 PHP domain CEA93_RS07825 PF11490 DNA polymerase III polC-type N-terminus II CEA93_RS07825 PF14480 DNA polymerase III polC-type N-terminus I CEA93_RS07830 PF02743 Cache domain CEA93_RS07830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS07830 PF00672 HAMP domain CEA93_RS07835 PF02028 BCCT, betaine/carnitine/choline family transporter CEA93_RS07840 PF01047 MarR family CEA93_RS07855 PF00753 Metallo-beta-lactamase superfamily CEA93_RS07860 PF05951 Bacterial protein of unknown function (DUF882) CEA93_RS07865 PF01471 Putative peptidoglycan binding domain CEA93_RS07865 PF03734 L,D-transpeptidase catalytic domain CEA93_RS07890 PF00925 GTP cyclohydrolase II CEA93_RS07895 PF00480 ROK family CEA93_RS07900 PF07715 TonB-dependent Receptor Plug Domain CEA93_RS07900 PF04886 PT repeat CEA93_RS07900 PF00593 TonB dependent receptor CEA93_RS07905 PF01243 Pyridoxamine 5'-phosphate oxidase CEA93_RS07910 PF06228 Haem utilisation ChuX/HutX CEA93_RS07915 PF03544 Gram-negative bacterial TonB protein C-terminal CEA93_RS07920 PF01618 MotA/TolQ/ExbB proton channel family CEA93_RS07925 PF02472 Biopolymer transport protein ExbD/TolR CEA93_RS07935 PF01032 FecCD transport family CEA93_RS07940 PF00005 ABC transporter CEA93_RS07945 PF00581 Rhodanese-like domain CEA93_RS07945 PF17773 UPF0176 acylphosphatase like domain CEA93_RS07955 PF00672 HAMP domain CEA93_RS07955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS07960 PF08244 Glycosyl hydrolases family 32 C terminal CEA93_RS07960 PF00251 Glycosyl hydrolases family 32 N-terminal domain CEA93_RS07965 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS07970 PF02378 Phosphotransferase system, EIIC CEA93_RS07970 PF00367 phosphotransferase system, EIIB CEA93_RS07975 PF00294 pfkB family carbohydrate kinase CEA93_RS07980 PF00563 EAL domain CEA93_RS07980 PF12792 CSS motif domain associated with EAL CEA93_RS07985 PF07885 Ion channel CEA93_RS07990 PF00672 HAMP domain CEA93_RS07990 PF12729 Four helix bundle sensory module for signal transduction CEA93_RS07990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS08015 PF05114 Protein of unknown function (DUF692) CEA93_RS08030 PF01654 Cytochrome bd terminal oxidase subunit I CEA93_RS08035 PF02322 Cytochrome bd terminal oxidase subunit II CEA93_RS08045 PF01042 Endoribonuclease L-PSP CEA93_RS08065 PF03050 Transposase IS66 family CEA93_RS08065 PF13007 Transposase C of IS166 homeodomain CEA93_RS08065 PF13817 IS66 C-terminal element CEA93_RS08065 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS08070 PF00665 Integrase core domain CEA93_RS08070 PF13276 HTH-like domain CEA93_RS08070 PF13333 Integrase core domain CEA93_RS08075 PF12833 Helix-turn-helix domain CEA93_RS08075 PF00072 Response regulator receiver domain CEA93_RS08085 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS08110 PF08239 Bacterial SH3 domain CEA93_RS08110 PF00069 Protein kinase domain CEA93_RS08125 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CEA93_RS08135 PF16697 Inner membrane component of T3SS, cytoplasmic domain CEA93_RS08155 PF07478 D-ala D-ala ligase C-terminus CEA93_RS08160 PF10431 C-terminal, D2-small domain, of ClpB protein CEA93_RS08160 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS08160 PF07724 AAA domain (Cdc48 subfamily) CEA93_RS08160 PF17871 AAA lid domain CEA93_RS08185 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CEA93_RS08205 PF06715 Gp5 C-terminal repeat (3 copies) CEA93_RS08205 PF04717 Type VI secretion system, phage-baseplate injector CEA93_RS08230 PF02899 Phage integrase, N-terminal SAM-like domain CEA93_RS08230 PF00589 Phage integrase family CEA93_RS08255 PF00072 Response regulator receiver domain CEA93_RS08255 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS08265 PF11852 Domain of unknown function (DUF3372) CEA93_RS08265 PF03714 Bacterial pullanase-associated domain CEA93_RS08265 PF18494 Pullulanase Ins domain CEA93_RS08265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEA93_RS08265 PF17967 Pullulanase N2 domain CEA93_RS08270 PF01584 CheW-like domain CEA93_RS08270 PF00072 Response regulator receiver domain CEA93_RS08280 PF12431 Transcriptional regulator CEA93_RS08280 PF00072 Response regulator receiver domain CEA93_RS08285 PF17203 Single cache domain 3 CEA93_RS08285 PF00989 PAS fold CEA93_RS08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS08285 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CEA93_RS08300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS08320 PF04204 Homoserine O-succinyltransferase CEA93_RS08335 PF05971 RNA methyltransferase CEA93_RS08340 PF01863 Protein of unknown function DUF45 CEA93_RS08350 PF03466 LysR substrate binding domain CEA93_RS08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS08370 PF00005 ABC transporter CEA93_RS08375 PF01032 FecCD transport family CEA93_RS08380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CEA93_RS08390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CEA93_RS08395 PF02654 Cobalamin-5-phosphate synthase CEA93_RS08400 PF02277 Phosphoribosyltransferase CEA93_RS08405 PF12146 Serine aminopeptidase, S33 CEA93_RS08405 PF11713 Peptidase C80 family CEA93_RS08405 PF16671 Actin cross-linking domain CEA93_RS08405 PF07634 RtxA repeat CEA93_RS08405 PF11647 Membrane Localization Domain CEA93_RS08410 PF02794 RTX toxin acyltransferase family CEA93_RS08420 PF00005 ABC transporter CEA93_RS08420 PF00664 ABC transporter transmembrane region CEA93_RS08420 PF03412 Peptidase C39 family CEA93_RS08430 PF03412 Peptidase C39 family CEA93_RS08430 PF00005 ABC transporter CEA93_RS08430 PF00664 ABC transporter transmembrane region CEA93_RS08435 PF00672 HAMP domain CEA93_RS08435 PF02743 Cache domain CEA93_RS08435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS08440 PF13460 NAD(P)H-binding CEA93_RS08445 PF00375 Sodium:dicarboxylate symporter family CEA93_RS08450 PF08411 Exonuclease C-terminal CEA93_RS08450 PF00929 Exonuclease CEA93_RS08455 PF03788 LrgA family CEA93_RS08460 PF04172 LrgB-like family CEA93_RS08465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEA93_RS08465 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CEA93_RS08470 PF00563 EAL domain CEA93_RS08470 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS08470 PF08448 PAS fold CEA93_RS08470 PF08447 PAS fold CEA93_RS08475 PF02222 ATP-grasp domain CEA93_RS08480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS08480 PF08447 PAS fold CEA93_RS08480 PF13426 PAS domain CEA93_RS08485 PF05724 Thiopurine S-methyltransferase (TPMT) CEA93_RS08490 PF05488 PAAR motif CEA93_RS08495 PF00216 Bacterial DNA-binding protein CEA93_RS08500 PF03483 B3/4 domain CEA93_RS08500 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CEA93_RS08500 PF01588 Putative tRNA binding domain CEA93_RS08500 PF03484 tRNA synthetase B5 domain CEA93_RS08500 PF03147 Ferredoxin-fold anticodon binding domain CEA93_RS08505 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CEA93_RS08505 PF01409 tRNA synthetases class II core domain (F) CEA93_RS08540 PF01066 CDP-alcohol phosphatidyltransferase CEA93_RS08545 PF01541 GIY-YIG catalytic domain CEA93_RS08545 PF02151 UvrB/uvrC motif CEA93_RS08545 PF08459 UvrC Helix-hairpin-helix N-terminal CEA93_RS08550 PF00072 Response regulator receiver domain CEA93_RS08550 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS08555 PF00136 DNA polymerase family B CEA93_RS08555 PF03104 DNA polymerase family B, exonuclease domain CEA93_RS08565 PF09285 Elongation factor P, C-terminal CEA93_RS08565 PF01132 Elongation factor P (EF-P) OB domain CEA93_RS08565 PF08207 Elongation factor P (EF-P) KOW-like domain CEA93_RS08570 PF04269 Protein of unknown function, DUF440 CEA93_RS08575 PF04266 ASCH domain CEA93_RS08580 PF07702 UTRA domain CEA93_RS08580 PF00392 Bacterial regulatory proteins, gntR family CEA93_RS08585 PF01979 Amidohydrolase family CEA93_RS08590 PF00491 Arginase family CEA93_RS08595 PF17392 Urocanase C-terminal domain CEA93_RS08595 PF17391 Urocanase N-terminal domain CEA93_RS08595 PF01175 Urocanase Rossmann-like domain CEA93_RS08600 PF00221 Aromatic amino acid lyase CEA93_RS08610 PF04191 Phospholipid methyltransferase CEA93_RS08615 PF13183 4Fe-4S dicluster domain CEA93_RS08615 PF01565 FAD binding domain CEA93_RS08615 PF02913 FAD linked oxidases, C-terminal domain CEA93_RS08645 PF12241 Trans-2-enoyl-CoA reductase catalytic region CEA93_RS08645 PF07055 Enoyl reductase FAD binding domain CEA93_RS08645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CEA93_RS08650 PF09317 Domain of unknown function (DUF1974) CEA93_RS08650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEA93_RS08650 PF02770 Acyl-CoA dehydrogenase, middle domain CEA93_RS08650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEA93_RS08655 PF16295 Tetracyclin repressor-like, C-terminal domain CEA93_RS08655 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS08670 PF00171 Aldehyde dehydrogenase family CEA93_RS08675 PF00563 EAL domain CEA93_RS08675 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS08675 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS08675 PF13188 PAS domain CEA93_RS08800 PF00574 Clp protease CEA93_RS08815 PF03354 Phage Terminase CEA93_RS08850 PF00959 Phage lysozyme CEA93_RS08880 PF06147 Protein of unknown function (DUF968) CEA93_RS08960 PF01381 Helix-turn-helix CEA93_RS08960 PF00717 Peptidase S24-like CEA93_RS08975 PF04245 37-kD nucleoid-associated bacterial protein CEA93_RS09035 PF13737 Transposase DDE domain CEA93_RS09100 PF00589 Phage integrase family CEA93_RS09100 PF13356 Arm DNA-binding domain CEA93_RS09110 PF06610 L-alanine exporter CEA93_RS09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS09115 PF00072 Response regulator receiver domain CEA93_RS09115 PF09308 LuxQ, periplasmic CEA93_RS09115 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS09135 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS09135 PF13007 Transposase C of IS166 homeodomain CEA93_RS09135 PF13817 IS66 C-terminal element CEA93_RS09135 PF03050 Transposase IS66 family CEA93_RS09140 PF02445 Quinolinate synthetase A protein CEA93_RS09145 PF13525 Outer membrane lipoprotein CEA93_RS09145 PF16331 TolA binding protein trimerisation CEA93_RS09150 PF00691 OmpA family CEA93_RS09155 PF07676 WD40-like Beta Propeller Repeat CEA93_RS09155 PF04052 TolB amino-terminal domain CEA93_RS09165 PF02472 Biopolymer transport protein ExbD/TolR CEA93_RS09170 PF01618 MotA/TolQ/ExbB proton channel family CEA93_RS09175 PF03061 Thioesterase superfamily CEA93_RS09180 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CEA93_RS09185 PF08173 Membrane bound YbgT-like protein CEA93_RS09190 PF02322 Cytochrome bd terminal oxidase subunit II CEA93_RS09195 PF01654 Cytochrome bd terminal oxidase subunit I CEA93_RS09200 PF17864 RuvB AAA lid domain CEA93_RS09200 PF05491 RuvB C-terminal winged helix domain CEA93_RS09200 PF05496 Holliday junction DNA helicase RuvB P-loop domain CEA93_RS09205 PF07499 RuvA, C-terminal domain CEA93_RS09205 PF01330 RuvA N terminal domain CEA93_RS09210 PF02075 Crossover junction endodeoxyribonuclease RuvC CEA93_RS09215 PF09190 DALR domain CEA93_RS09215 PF01406 tRNA synthetases class I (C) catalytic domain CEA93_RS09220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEA93_RS09225 PF00149 Calcineurin-like phosphoesterase CEA93_RS09230 PF00563 EAL domain CEA93_RS09230 PF08668 HDOD domain CEA93_RS09235 PF02810 SEC-C motif CEA93_RS09250 PF01925 Sulfite exporter TauE/SafE CEA93_RS09255 PF07445 Primosomal replication protein priC CEA93_RS09260 PF10689 Protein of unknown function (DUF2496) CEA93_RS09265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS09265 PF00672 HAMP domain CEA93_RS09270 PF03372 Endonuclease/Exonuclease/phosphatase family CEA93_RS09275 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS09280 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS09285 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS09290 PF00005 ABC transporter CEA93_RS09305 PF01228 Glycine radical CEA93_RS09305 PF02901 Pyruvate formate lyase-like CEA93_RS09315 PF00672 HAMP domain CEA93_RS09315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS09320 PF04055 Radical SAM superfamily CEA93_RS09330 PF03887 YfbU domain CEA93_RS09335 PF06798 PrkA serine protein kinase C-terminal domain CEA93_RS09335 PF08298 PrkA AAA domain CEA93_RS09340 PF04285 Protein of unknown function (DUF444) CEA93_RS09345 PF04293 SpoVR like protein CEA93_RS09355 PF02348 Cytidylyltransferase CEA93_RS09360 PF03966 Trm112p-like protein CEA93_RS09365 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CEA93_RS09370 PF00005 ABC transporter CEA93_RS09370 PF00664 ABC transporter transmembrane region CEA93_RS09375 PF13567 Domain of unknown function (DUF4131) CEA93_RS09375 PF03772 Competence protein CEA93_RS09375 PF00753 Metallo-beta-lactamase superfamily CEA93_RS09385 PF02687 FtsX-like permease family CEA93_RS09385 PF12704 MacB-like periplasmic core domain CEA93_RS09390 PF00005 ABC transporter CEA93_RS09395 PF02687 FtsX-like permease family CEA93_RS09395 PF12704 MacB-like periplasmic core domain CEA93_RS09405 PF17757 UvrB interaction domain CEA93_RS09405 PF02559 CarD-like/TRCF domain CEA93_RS09405 PF00270 DEAD/DEAH box helicase CEA93_RS09405 PF03461 TRCF domain CEA93_RS09405 PF00271 Helicase conserved C-terminal domain CEA93_RS09415 PF16458 Beta-prism lectin CEA93_RS09415 PF12563 Hemolytic toxin N terminal CEA93_RS09415 PF07968 Leukocidin/Hemolysin toxin family CEA93_RS09420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS09425 PF05728 Uncharacterised protein family (UPF0227) CEA93_RS09435 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CEA93_RS09435 PF13036 Peptidoglycan-synthase activator LpoB CEA93_RS09450 PF01230 HIT domain CEA93_RS09455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS09455 PF00672 HAMP domain CEA93_RS09465 PF00392 Bacterial regulatory proteins, gntR family CEA93_RS09465 PF07840 FadR C-terminal domain CEA93_RS09470 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CEA93_RS09475 PF02600 Disulfide bond formation protein DsbB CEA93_RS09485 PF08241 Methyltransferase domain CEA93_RS09490 PF00155 Aminotransferase class I and II CEA93_RS09495 PF04055 Radical SAM superfamily CEA93_RS09495 PF06968 Biotin and Thiamin Synthesis associated domain CEA93_RS09500 PF00202 Aminotransferase class-III CEA93_RS09505 PF02403 Seryl-tRNA synthetase N-terminal domain CEA93_RS09505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEA93_RS09510 PF16193 AAA C-terminal domain CEA93_RS09510 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS09510 PF12002 MgsA AAA+ ATPase C terminal CEA93_RS09515 PF03548 Outer membrane lipoprotein carrier protein LolA CEA93_RS09520 PF07516 SecA Wing and Scaffold domain CEA93_RS09520 PF02810 SEC-C motif CEA93_RS09520 PF01043 SecA preprotein cross-linking domain CEA93_RS09520 PF07517 SecA DEAD-like domain CEA93_RS09525 PF01207 Dihydrouridine synthase (Dus) CEA93_RS09530 PF00005 ABC transporter CEA93_RS09535 PF02653 Branched-chain amino acid transport system / permease component CEA93_RS09545 PF04217 Protein of unknown function, DUF412 CEA93_RS09550 PF00871 Acetokinase family CEA93_RS09555 PF01515 Phosphate acetyl/butaryl transferase CEA93_RS09555 PF07085 DRTGG domain CEA93_RS09560 PF13409 Glutathione S-transferase, N-terminal domain CEA93_RS09565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEA93_RS09565 PF00005 ABC transporter CEA93_RS09570 PF00005 ABC transporter CEA93_RS09570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEA93_RS09575 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS09575 PF12911 N-terminal TM domain of oligopeptide transport permease C CEA93_RS09580 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS09585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEA93_RS09590 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS09590 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS09590 PF00563 EAL domain CEA93_RS09600 PF04820 Tryptophan halogenase CEA93_RS09620 PF00550 Phosphopantetheine attachment site CEA93_RS09625 PF00550 Phosphopantetheine attachment site CEA93_RS09635 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS09635 PF00501 AMP-binding enzyme CEA93_RS09645 PF00535 Glycosyl transferase family 2 CEA93_RS09650 PF00221 Aromatic amino acid lyase CEA93_RS09675 PF00109 Beta-ketoacyl synthase, N-terminal domain CEA93_RS09675 PF02801 Beta-ketoacyl synthase, C-terminal domain CEA93_RS09680 PF07977 FabA-like domain CEA93_RS09690 PF00109 Beta-ketoacyl synthase, N-terminal domain CEA93_RS09690 PF02801 Beta-ketoacyl synthase, C-terminal domain CEA93_RS09695 PF06629 MltA-interacting protein MipA CEA93_RS09710 PF01081 KDPG and KHG aldolase CEA93_RS09715 PF02447 GntP family permease CEA93_RS09720 PF01202 Shikimate kinase CEA93_RS09725 PF00920 Dehydratase family CEA93_RS09730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEA93_RS09730 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS09745 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS09745 PF00672 HAMP domain CEA93_RS09750 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS09750 PF00072 Response regulator receiver domain CEA93_RS09760 PF01810 LysE type translocator CEA93_RS09765 PF01037 Lrp/AsnC ligand binding domain CEA93_RS09770 PF00884 Sulfatase CEA93_RS09770 PF08019 Phosphoethanolamine transferase EptA/EptB CEA93_RS09775 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS09775 PF08521 Two-component sensor kinase N-terminal CEA93_RS09780 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS09780 PF00072 Response regulator receiver domain CEA93_RS09790 PF00106 short chain dehydrogenase CEA93_RS09800 PF00501 AMP-binding enzyme CEA93_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS09815 PF03466 LysR substrate binding domain CEA93_RS09825 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS09835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEA93_RS09840 PF09619 Type III secretion system lipoprotein chaperone (YscW) CEA93_RS09850 PF13404 AsnC-type helix-turn-helix domain CEA93_RS09850 PF01037 Lrp/AsnC ligand binding domain CEA93_RS09855 PF00291 Pyridoxal-phosphate dependent enzyme CEA93_RS09870 PF07690 Major Facilitator Superfamily CEA93_RS09890 PF00501 AMP-binding enzyme CEA93_RS09890 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS09895 PF13378 Enolase C-terminal domain-like CEA93_RS09900 PF00378 Enoyl-CoA hydratase/isomerase CEA93_RS09905 PF12697 Alpha/beta hydrolase family CEA93_RS09910 PF16582 Middle domain of thiamine pyrophosphate CEA93_RS09910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEA93_RS09910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEA93_RS09915 PF00425 chorismate binding enzyme CEA93_RS09925 PF00155 Aminotransferase class I and II CEA93_RS09935 PF01966 HD domain CEA93_RS09935 PF13286 Phosphohydrolase-associated domain CEA93_RS09950 PF01343 Peptidase family S49 CEA93_RS09950 PF08496 Peptidase family S49 N-terminal CEA93_RS09955 PF00106 short chain dehydrogenase CEA93_RS09960 PF01584 CheW-like domain CEA93_RS09960 PF00072 Response regulator receiver domain CEA93_RS09965 PF00480 ROK family CEA93_RS09970 PF02887 Pyruvate kinase, alpha/beta domain CEA93_RS09970 PF00224 Pyruvate kinase, barrel domain CEA93_RS09975 PF01734 Patatin-like phospholipase CEA93_RS09985 PF00209 Sodium:neurotransmitter symporter family CEA93_RS09995 PF00367 phosphotransferase system, EIIB CEA93_RS09995 PF02378 Phosphotransferase system, EIIC CEA93_RS10000 PF01026 TatD related DNase CEA93_RS10005 PF09115 DNA polymerase III, delta subunit, C terminal CEA93_RS10010 PF02223 Thymidylate kinase CEA93_RS10015 PF02618 YceG-like family CEA93_RS10020 PF01063 Amino-transferase class IV CEA93_RS10025 PF00109 Beta-ketoacyl synthase, N-terminal domain CEA93_RS10025 PF02801 Beta-ketoacyl synthase, C-terminal domain CEA93_RS10030 PF00550 Phosphopantetheine attachment site CEA93_RS10040 PF00698 Acyl transferase domain CEA93_RS10045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEA93_RS10045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEA93_RS10050 PF02504 Fatty acid synthesis protein CEA93_RS10055 PF01783 Ribosomal L32p protein family CEA93_RS10060 PF02620 Large ribosomal RNA subunit accumulation protein YceD CEA93_RS10065 PF02545 Maf-like protein CEA93_RS10070 PF00849 RNA pseudouridylate synthase CEA93_RS10070 PF01479 S4 domain CEA93_RS10075 PF12111 Polyribonucleotide phosphorylase C terminal CEA93_RS10075 PF00575 S1 RNA binding domain CEA93_RS10075 PF10150 Ribonuclease E/G family CEA93_RS10085 PF00465 Iron-containing alcohol dehydrogenase CEA93_RS10085 PF00171 Aldehyde dehydrogenase family CEA93_RS10090 PF01914 MarC family integral membrane protein CEA93_RS10095 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEA93_RS10095 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEA93_RS10100 PF03553 Na+/H+ antiporter family CEA93_RS10110 PF04245 37-kD nucleoid-associated bacterial protein CEA93_RS10115 PF07208 Protein of unknown function (DUF1414) CEA93_RS10120 PF11893 Domain of unknown function (DUF3413) CEA93_RS10120 PF00884 Sulfatase CEA93_RS10130 PF00384 Molybdopterin oxidoreductase CEA93_RS10135 PF02634 FdhD/NarQ family CEA93_RS10150 PF01751 Toprim domain CEA93_RS10150 PF01131 DNA topoisomerase CEA93_RS10155 PF00462 Glutaredoxin CEA93_RS10160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEA93_RS10160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEA93_RS10175 PF04333 MlaA lipoprotein CEA93_RS10185 PF03918 Cytochrome C biogenesis protein CEA93_RS10190 PF08534 Redoxin CEA93_RS10195 PF01578 Cytochrome C assembly protein CEA93_RS10195 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CEA93_RS10200 PF03100 CcmE CEA93_RS10210 PF01578 Cytochrome C assembly protein CEA93_RS10215 PF03379 CcmB protein CEA93_RS10220 PF00005 ABC transporter CEA93_RS10230 PF01584 CheW-like domain CEA93_RS10240 PF13614 AAA domain CEA93_RS10245 PF00072 Response regulator receiver domain CEA93_RS10245 PF01339 CheB methylesterase CEA93_RS10250 PF01584 CheW-like domain CEA93_RS10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS10250 PF01627 Hpt domain CEA93_RS10250 PF00072 Response regulator receiver domain CEA93_RS10250 PF02895 Signal transducing histidine kinase, homodimeric domain CEA93_RS10255 PF04344 Chemotaxis phosphatase, CheZ CEA93_RS10260 PF00072 Response regulator receiver domain CEA93_RS10265 PF04545 Sigma-70, region 4 CEA93_RS10265 PF04542 Sigma-70 region 2 CEA93_RS10265 PF04539 Sigma-70 region 3 CEA93_RS10270 PF10609 NUBPL iron-transfer P-loop NTPase CEA93_RS10275 PF00448 SRP54-type protein, GTPase domain CEA93_RS10280 PF00771 FHIPEP family CEA93_RS10285 PF00300 Histidine phosphatase superfamily (branch 1) CEA93_RS10290 PF05193 Peptidase M16 inactive domain CEA93_RS10290 PF00675 Insulinase (Peptidase family M16) CEA93_RS10295 PF06185 YecM protein CEA93_RS10300 PF00750 tRNA synthetases class I (R) CEA93_RS10300 PF05746 DALR anticodon binding domain CEA93_RS10300 PF03485 Arginyl tRNA synthetase N terminal domain CEA93_RS10315 PF07664 Ferrous iron transport protein B C terminus CEA93_RS10315 PF02421 Ferrous iron transport protein B CEA93_RS10315 PF17910 FeoB cytosolic helical domain CEA93_RS10315 PF07670 Nucleoside recognition CEA93_RS10320 PF04023 FeoA domain CEA93_RS10325 PF12833 Helix-turn-helix domain CEA93_RS10325 PF02311 AraC-like ligand binding domain CEA93_RS10330 PF01297 Zinc-uptake complex component A periplasmic CEA93_RS10335 PF00005 ABC transporter CEA93_RS10340 PF00950 ABC 3 transport family CEA93_RS10345 PF00549 CoA-ligase CEA93_RS10345 PF02629 CoA binding domain CEA93_RS10350 PF08442 ATP-grasp domain CEA93_RS10350 PF00549 CoA-ligase CEA93_RS10355 PF02817 e3 binding domain CEA93_RS10355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEA93_RS10355 PF00364 Biotin-requiring enzyme CEA93_RS10360 PF16870 2-oxoglutarate dehydrogenase C-terminal CEA93_RS10360 PF00676 Dehydrogenase E1 component CEA93_RS10360 PF02779 Transketolase, pyrimidine binding domain CEA93_RS10360 PF16078 2-oxoglutarate dehydrogenase N-terminus CEA93_RS10365 PF13085 2Fe-2S iron-sulfur cluster binding domain CEA93_RS10370 PF02910 Fumarate reductase flavoprotein C-term CEA93_RS10370 PF00890 FAD binding domain CEA93_RS10375 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEA93_RS10380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEA93_RS10385 PF00285 Citrate synthase, C-terminal domain CEA93_RS10390 PF01784 NIF3 (NGG1p interacting factor 3) CEA93_RS10400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEA93_RS10400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEA93_RS10400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEA93_RS10400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEA93_RS10405 PF03925 SeqA protein C-terminal domain CEA93_RS10405 PF17206 SeqA protein N-terminal domain CEA93_RS10410 PF12697 Alpha/beta hydrolase family CEA93_RS10420 PF00258 Flavodoxin CEA93_RS10425 PF04172 LrgB-like family CEA93_RS10430 PF03788 LrgA family CEA93_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS10435 PF03466 LysR substrate binding domain CEA93_RS10445 PF01475 Ferric uptake regulator family CEA93_RS10450 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEA93_RS10450 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEA93_RS10455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEA93_RS10455 PF11890 Domain of unknown function (DUF3410) CEA93_RS10455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEA93_RS10460 PF02801 Beta-ketoacyl synthase, C-terminal domain CEA93_RS10460 PF00109 Beta-ketoacyl synthase, N-terminal domain CEA93_RS10465 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CEA93_RS10465 PF01266 FAD dependent oxidoreductase CEA93_RS10470 PF03358 NADPH-dependent FMN reductase CEA93_RS10475 PF08891 YfcL protein CEA93_RS10480 PF04315 Elongation factor P hydroxylase CEA93_RS10485 PF03458 UPF0126 domain CEA93_RS10490 PF01264 Chorismate synthase CEA93_RS10495 PF05175 Methyltransferase small domain CEA93_RS10500 PF01713 Smr domain CEA93_RS10505 PF01312 FlhB HrpN YscU SpaS Family CEA93_RS10510 PF01311 Bacterial export proteins, family 1 CEA93_RS10515 PF01313 Bacterial export proteins, family 3 CEA93_RS10520 PF00813 FliP family CEA93_RS10525 PF04347 Flagellar biosynthesis protein, FliO CEA93_RS10530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEA93_RS10535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEA93_RS10535 PF02154 Flagellar motor switch protein FliM CEA93_RS10555 PF18269 T3SS EscN ATPase C-terminal domain CEA93_RS10555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEA93_RS10565 PF14841 FliG middle domain CEA93_RS10565 PF01706 FliG C-terminal domain CEA93_RS10565 PF14842 FliG N-terminal domain CEA93_RS10570 PF01514 Secretory protein of YscJ/FliF family CEA93_RS10570 PF08345 Flagellar M-ring protein C-terminal CEA93_RS10575 PF02049 Flagellar hook-basal body complex protein FliE CEA93_RS10580 PF02954 Bacterial regulatory protein, Fis family CEA93_RS10580 PF00072 Response regulator receiver domain CEA93_RS10580 PF00158 Sigma-54 interaction domain CEA93_RS10585 PF13188 PAS domain CEA93_RS10585 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS10590 PF02954 Bacterial regulatory protein, Fis family CEA93_RS10590 PF00158 Sigma-54 interaction domain CEA93_RS10590 PF06490 Flagellar regulatory protein FleQ CEA93_RS10595 PF02561 Flagellar protein FliS CEA93_RS10605 PF02465 Flagellar hook-associated protein 2 N-terminus CEA93_RS10605 PF07195 Flagellar hook-associated protein 2 C-terminus CEA93_RS10605 PF07196 Flagellin hook IN motif CEA93_RS10610 PF03646 FlaG protein CEA93_RS10615 PF07196 Flagellin hook IN motif CEA93_RS10615 PF00700 Bacterial flagellin C-terminal helical region CEA93_RS10615 PF00669 Bacterial flagellin N-terminal helical region CEA93_RS10620 PF07196 Flagellin hook IN motif CEA93_RS10620 PF00700 Bacterial flagellin C-terminal helical region CEA93_RS10620 PF00669 Bacterial flagellin N-terminal helical region CEA93_RS10625 PF00700 Bacterial flagellin C-terminal helical region CEA93_RS10625 PF07196 Flagellin hook IN motif CEA93_RS10625 PF00669 Bacterial flagellin N-terminal helical region CEA93_RS10630 PF04261 Dyp-type peroxidase family CEA93_RS10635 PF11143 Protein of unknown function (DUF2919) CEA93_RS10655 PF03960 ArsC family CEA93_RS10660 PF01546 Peptidase family M20/M25/M40 CEA93_RS10660 PF07687 Peptidase dimerisation domain CEA93_RS10675 PF06804 NlpB/DapX lipoprotein CEA93_RS10680 PF00701 Dihydrodipicolinate synthetase family CEA93_RS10690 PF00578 AhpC/TSA family CEA93_RS10695 PF00672 HAMP domain CEA93_RS10695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS10695 PF02743 Cache domain CEA93_RS10700 PF01594 AI-2E family transporter CEA93_RS10710 PF13181 Tetratricopeptide repeat CEA93_RS10710 PF01435 Peptidase family M48 CEA93_RS10715 PF03960 ArsC family CEA93_RS10720 PF03358 NADPH-dependent FMN reductase CEA93_RS10735 PF00860 Permease family CEA93_RS10740 PF04073 Aminoacyl-tRNA editing domain CEA93_RS10745 PF02872 5'-nucleotidase, C-terminal domain CEA93_RS10745 PF00149 Calcineurin-like phosphoesterase CEA93_RS10750 PF00793 DAHP synthetase I family CEA93_RS10755 PF13369 Transglutaminase-like superfamily CEA93_RS10760 PF04247 Invasion gene expression up-regulator, SirB CEA93_RS10765 PF13847 Methyltransferase domain CEA93_RS10765 PF17827 PrmC N-terminal domain CEA93_RS10770 PF00472 RF-1 domain CEA93_RS10770 PF03462 PCRF domain CEA93_RS10775 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CEA93_RS10775 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CEA93_RS10775 PF01488 Shikimate / quinate 5-dehydrogenase CEA93_RS10780 PF03550 Outer membrane lipoprotein LolB CEA93_RS10785 PF08544 GHMP kinases C terminal CEA93_RS10785 PF00288 GHMP kinases N terminal domain CEA93_RS10790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEA93_RS10790 PF14572 Phosphoribosyl synthetase-associated domain CEA93_RS10795 PF01195 Peptidyl-tRNA hydrolase CEA93_RS10800 PF06071 Protein of unknown function (DUF933) CEA93_RS10800 PF01926 50S ribosome-binding GTPase CEA93_RS10875 PF07196 Flagellin hook IN motif CEA93_RS10875 PF00669 Bacterial flagellin N-terminal helical region CEA93_RS10875 PF00700 Bacterial flagellin C-terminal helical region CEA93_RS10880 PF00700 Bacterial flagellin C-terminal helical region CEA93_RS10880 PF07196 Flagellin hook IN motif CEA93_RS10880 PF00669 Bacterial flagellin N-terminal helical region CEA93_RS10890 PF00669 Bacterial flagellin N-terminal helical region CEA93_RS10895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEA93_RS10895 PF07196 Flagellin hook IN motif CEA93_RS10900 PF10135 Rod binding protein CEA93_RS10900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CEA93_RS10905 PF02119 Flagellar P-ring protein CEA93_RS10910 PF02107 Flagellar L-ring protein CEA93_RS10915 PF00460 Flagella basal body rod protein CEA93_RS10915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEA93_RS10920 PF00460 Flagella basal body rod protein CEA93_RS10920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEA93_RS10925 PF07559 Flagellar basal body protein FlaE CEA93_RS10925 PF00460 Flagella basal body rod protein CEA93_RS10925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEA93_RS10930 PF13860 FlgD Ig-like domain CEA93_RS10930 PF13861 FlgD Tudor-like domain CEA93_RS10930 PF03963 Flagellar hook capping protein - N-terminal region CEA93_RS10935 PF00460 Flagella basal body rod protein CEA93_RS10935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEA93_RS10940 PF00460 Flagella basal body rod protein CEA93_RS10945 PF03705 CheR methyltransferase, all-alpha domain CEA93_RS10945 PF01739 CheR methyltransferase, SAM binding domain CEA93_RS10950 PF01584 CheW-like domain CEA93_RS10950 PF00072 Response regulator receiver domain CEA93_RS10960 PF04316 Anti-sigma-28 factor, FlgM CEA93_RS10995 PF00691 OmpA family CEA93_RS10995 PF01389 OmpA-like transmembrane domain CEA93_RS11000 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEA93_RS11005 PF00403 Heavy-metal-associated domain CEA93_RS11015 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CEA93_RS11015 PF00728 Glycosyl hydrolase family 20, catalytic domain CEA93_RS11015 PF03173 Putative carbohydrate binding domain CEA93_RS11015 PF02838 Glycosyl hydrolase family 20, domain 2 CEA93_RS11030 PF01479 S4 domain CEA93_RS11030 PF00849 RNA pseudouridylate synthase CEA93_RS11040 PF00586 AIR synthase related protein, N-terminal domain CEA93_RS11040 PF02769 AIR synthase related protein, C-terminal domain CEA93_RS11045 PF00551 Formyl transferase CEA93_RS11050 PF13230 Glutamine amidotransferases class-II CEA93_RS11055 PF13580 SIS domain CEA93_RS11060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEA93_RS11060 PF02770 Acyl-CoA dehydrogenase, middle domain CEA93_RS11060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEA93_RS11060 PF09317 Domain of unknown function (DUF1974) CEA93_RS11070 PF00929 Exonuclease CEA93_RS11075 PF00075 RNase H CEA93_RS11080 PF08241 Methyltransferase domain CEA93_RS11085 PF00753 Metallo-beta-lactamase superfamily CEA93_RS11085 PF16123 Hydroxyacylglutathione hydrolase C-terminus CEA93_RS11090 PF01464 Transglycosylase SLT domain CEA93_RS11090 PF01476 LysM domain CEA93_RS11105 PF00543 Nitrogen regulatory protein P-II CEA93_RS11110 PF00034 Cytochrome c CEA93_RS11115 PF09179 TilS substrate binding domain CEA93_RS11115 PF11734 TilS substrate C-terminal domain CEA93_RS11115 PF01171 PP-loop family CEA93_RS11120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CEA93_RS11125 PF14579 Helix-hairpin-helix motif CEA93_RS11125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEA93_RS11125 PF01336 OB-fold nucleic acid binding domain CEA93_RS11125 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEA93_RS11125 PF02811 PHP domain CEA93_RS11130 PF01351 Ribonuclease HII CEA93_RS11135 PF02684 Lipid-A-disaccharide synthetase CEA93_RS11140 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS11140 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CEA93_RS11145 PF07977 FabA-like domain CEA93_RS11150 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS11150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEA93_RS11155 PF03938 Outer membrane protein (OmpH-like) CEA93_RS11160 PF01103 Surface antigen CEA93_RS11160 PF07244 Surface antigen variable number repeat CEA93_RS11165 PF17820 PDZ domain CEA93_RS11165 PF02163 Peptidase family M50 CEA93_RS11170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CEA93_RS11170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CEA93_RS11170 PF13288 DXP reductoisomerase C-terminal domain CEA93_RS11180 PF01255 Putative undecaprenyl diphosphate synthase CEA93_RS11185 PF01765 Ribosome recycling factor CEA93_RS11190 PF00696 Amino acid kinase family CEA93_RS11195 PF00889 Elongation factor TS CEA93_RS11200 PF00318 Ribosomal protein S2 CEA93_RS11205 PF00557 Metallopeptidase family M24 CEA93_RS11210 PF01909 Nucleotidyltransferase domain CEA93_RS11210 PF08335 GlnD PII-uridylyltransferase CEA93_RS11210 PF01842 ACT domain CEA93_RS11210 PF01966 HD domain CEA93_RS11215 PF11944 Protein of unknown function (DUF3461) CEA93_RS11220 PF04608 Phosphatidylglycerophosphatase A CEA93_RS11225 PF02769 AIR synthase related protein, C-terminal domain CEA93_RS11225 PF00586 AIR synthase related protein, N-terminal domain CEA93_RS11230 PF01029 NusB family CEA93_RS11235 PF00885 6,7-dimethyl-8-ribityllumazine synthase CEA93_RS11240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEA93_RS11240 PF00925 GTP cyclohydrolase II CEA93_RS11245 PF00677 Lumazine binding domain CEA93_RS11250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEA93_RS11250 PF01872 RibD C-terminal domain CEA93_RS11255 PF03477 ATP cone domain CEA93_RS11260 PF00171 Aldehyde dehydrogenase family CEA93_RS11265 PF01472 PUA domain CEA93_RS11265 PF00696 Amino acid kinase family CEA93_RS11270 PF07417 Sigma factor-binding transcriptional regulator Crl CEA93_RS11275 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CEA93_RS11280 PF00156 Phosphoribosyl transferase domain CEA93_RS11285 PF00860 Permease family CEA93_RS11290 PF07687 Peptidase dimerisation domain CEA93_RS11290 PF01546 Peptidase family M20/M25/M40 CEA93_RS11295 PF08443 RimK-like ATP-grasp domain CEA93_RS11295 PF18030 RimK PreATP-grasp domain CEA93_RS11300 PF18030 RimK PreATP-grasp domain CEA93_RS11300 PF08443 RimK-like ATP-grasp domain CEA93_RS11310 PF00209 Sodium:neurotransmitter symporter family CEA93_RS11325 PF11799 impB/mucB/samB family C-terminal domain CEA93_RS11325 PF00817 impB/mucB/samB family CEA93_RS11325 PF11798 IMS family HHH motif CEA93_RS11335 PF02424 ApbE family CEA93_RS11340 PF00111 2Fe-2S iron-sulfur cluster binding domain CEA93_RS11340 PF00175 Oxidoreductase NAD-binding domain CEA93_RS11340 PF00970 Oxidoreductase FAD-binding domain CEA93_RS11345 PF02508 Rnf-Nqr subunit, membrane protein CEA93_RS11350 PF02508 Rnf-Nqr subunit, membrane protein CEA93_RS11355 PF04205 FMN-binding domain CEA93_RS11360 PF03116 NQR2, RnfD, RnfE family CEA93_RS11365 PF11973 NQRA C-terminal domain CEA93_RS11365 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CEA93_RS11370 PF01722 BolA-like protein CEA93_RS11375 PF05175 Methyltransferase small domain CEA93_RS11385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEA93_RS11390 PF07690 Major Facilitator Superfamily CEA93_RS11400 PF04542 Sigma-70 region 2 CEA93_RS11400 PF04545 Sigma-70, region 4 CEA93_RS11410 PF03502 Nucleoside-specific channel-forming protein, Tsx CEA93_RS11415 PF08546 Ketopantoate reductase PanE/ApbA C terminal CEA93_RS11415 PF02558 Ketopantoate reductase PanE/ApbA CEA93_RS11420 PF01965 DJ-1/PfpI family CEA93_RS11425 PF00266 Aminotransferase class-V CEA93_RS11430 PF02657 Fe-S metabolism associated domain CEA93_RS11435 PF00899 ThiF family CEA93_RS11440 PF03562 MltA specific insert domain CEA93_RS11440 PF06725 3D domain CEA93_RS11450 PF00696 Amino acid kinase family CEA93_RS11450 PF00583 Acetyltransferase (GNAT) family CEA93_RS11460 PF13538 UvrD-like helicase C-terminal domain CEA93_RS11465 PF12705 PD-(D/E)XK nuclease superfamily CEA93_RS11465 PF00580 UvrD/REP helicase N-terminal domain CEA93_RS11465 PF13361 UvrD-like helicase C-terminal domain CEA93_RS11470 PF17946 RecC C-terminal domain CEA93_RS11485 PF07130 YebG protein CEA93_RS11490 PF14602 Hexapeptide repeat of succinyl-transferase CEA93_RS11490 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CEA93_RS11500 PF00583 Acetyltransferase (GNAT) family CEA93_RS11510 PF01544 CorA-like Mg2+ transporter protein CEA93_RS11520 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS11525 PF04986 Putative transposase CEA93_RS11525 PF14319 Transposase zinc-binding domain CEA93_RS11530 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS11535 PF10509 Galactokinase galactose-binding signature CEA93_RS11535 PF08544 GHMP kinases C terminal CEA93_RS11535 PF00288 GHMP kinases N terminal domain CEA93_RS11540 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CEA93_RS11540 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CEA93_RS11545 PF16363 GDP-mannose 4,6 dehydratase CEA93_RS11560 PF11849 Domain of unknown function (DUF3369) CEA93_RS11565 PF00501 AMP-binding enzyme CEA93_RS11570 PF09905 DNA-binding protein VF530 CEA93_RS11575 PF14492 Elongation Factor G, domain II CEA93_RS11575 PF00009 Elongation factor Tu GTP binding domain CEA93_RS11575 PF03144 Elongation factor Tu domain 2 CEA93_RS11575 PF00679 Elongation factor G C-terminus CEA93_RS11575 PF03764 Elongation factor G, domain IV CEA93_RS11580 PF18073 Rubredoxin metal binding domain CEA93_RS11590 PF18429 Domain of unknown function (DUF5609) CEA93_RS11600 PF01048 Phosphorylase superfamily CEA93_RS11605 PF01676 Metalloenzyme superfamily CEA93_RS11610 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEA93_RS11610 PF00591 Glycosyl transferase family, a/b domain CEA93_RS11610 PF02885 Glycosyl transferase family, helical bundle domain CEA93_RS11615 PF01791 DeoC/LacD family aldolase CEA93_RS11620 PF07670 Nucleoside recognition CEA93_RS11620 PF07662 Na+ dependent nucleoside transporter C-terminus CEA93_RS11620 PF01773 Na+ dependent nucleoside transporter N-terminus CEA93_RS11625 PF01026 TatD related DNase CEA93_RS11630 PF03883 Peroxide stress protein YaaA CEA93_RS11635 PF01235 Sodium:alanine symporter family CEA93_RS11650 PF03167 Uracil DNA glycosylase superfamily CEA93_RS11655 PF01261 Xylose isomerase-like TIM barrel CEA93_RS11660 PF01228 Glycine radical CEA93_RS11665 PF14821 Threonine synthase N terminus CEA93_RS11665 PF00291 Pyridoxal-phosphate dependent enzyme CEA93_RS11670 PF00288 GHMP kinases N terminal domain CEA93_RS11670 PF08544 GHMP kinases C terminal CEA93_RS11675 PF13840 ACT domain CEA93_RS11675 PF00696 Amino acid kinase family CEA93_RS11675 PF00742 Homoserine dehydrogenase CEA93_RS11675 PF03447 Homoserine dehydrogenase, NAD binding domain CEA93_RS11675 PF01842 ACT domain CEA93_RS11685 PF03737 Aldolase/RraA CEA93_RS11690 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS11690 PF00072 Response regulator receiver domain CEA93_RS11700 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS11700 PF00072 Response regulator receiver domain CEA93_RS11700 PF00989 PAS fold CEA93_RS11700 PF18415 Histidine kinase receptor ArcB trans-membrane domain CEA93_RS11700 PF01627 Hpt domain CEA93_RS11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS11705 PF04055 Radical SAM superfamily CEA93_RS11705 PF16199 Radical_SAM C-terminal domain CEA93_RS11710 PF01645 Conserved region in glutamate synthase CEA93_RS11710 PF01493 GXGXG motif CEA93_RS11710 PF00310 Glutamine amidotransferases class-II CEA93_RS11710 PF04898 Glutamate synthase central domain CEA93_RS11715 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEA93_RS11715 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS11720 PF04898 Glutamate synthase central domain CEA93_RS11720 PF01645 Conserved region in glutamate synthase CEA93_RS11720 PF00310 Glutamine amidotransferases class-II CEA93_RS11720 PF01493 GXGXG motif CEA93_RS11725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEA93_RS11725 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS11740 PF01048 Phosphorylase superfamily CEA93_RS11750 PF01497 Periplasmic binding protein CEA93_RS11755 PF03458 UPF0126 domain CEA93_RS11760 PF03466 LysR substrate binding domain CEA93_RS11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS11765 PF01925 Sulfite exporter TauE/SafE CEA93_RS11770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEA93_RS11770 PF02142 MGS-like domain CEA93_RS11770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEA93_RS11775 PF00117 Glutamine amidotransferase class-I CEA93_RS11775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CEA93_RS11780 PF05173 Dihydrodipicolinate reductase, C-terminus CEA93_RS11780 PF01113 Dihydrodipicolinate reductase, N-terminus CEA93_RS11785 PF00293 NUDIX domain CEA93_RS11790 PF07516 SecA Wing and Scaffold domain CEA93_RS11790 PF01043 SecA preprotein cross-linking domain CEA93_RS11790 PF02810 SEC-C motif CEA93_RS11790 PF07517 SecA DEAD-like domain CEA93_RS11800 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CEA93_RS11805 PF12327 FtsZ family, C-terminal domain CEA93_RS11805 PF00091 Tubulin/FtsZ family, GTPase domain CEA93_RS11810 PF02491 SHS2 domain inserted in FTSA CEA93_RS11815 PF03799 Cell division protein FtsQ CEA93_RS11815 PF08478 POTRA domain, FtsQ-type CEA93_RS11820 PF01225 Mur ligase family, catalytic domain CEA93_RS11820 PF08245 Mur ligase middle domain CEA93_RS11820 PF02875 Mur ligase family, glutamate ligase domain CEA93_RS11825 PF03033 Glycosyltransferase family 28 N-terminal domain CEA93_RS11825 PF04101 Glycosyltransferase family 28 C-terminal domain CEA93_RS11830 PF01098 Cell cycle protein CEA93_RS11835 PF08245 Mur ligase middle domain CEA93_RS11835 PF02875 Mur ligase family, glutamate ligase domain CEA93_RS11840 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CEA93_RS11840 PF00953 Glycosyl transferase family 4 CEA93_RS11845 PF01225 Mur ligase family, catalytic domain CEA93_RS11845 PF08245 Mur ligase middle domain CEA93_RS11845 PF02875 Mur ligase family, glutamate ligase domain CEA93_RS11850 PF02875 Mur ligase family, glutamate ligase domain CEA93_RS11850 PF08245 Mur ligase middle domain CEA93_RS11850 PF01225 Mur ligase family, catalytic domain CEA93_RS11855 PF00905 Penicillin binding protein transpeptidase domain CEA93_RS11855 PF03717 Penicillin-binding Protein dimerisation domain CEA93_RS11860 PF04999 Cell division protein FtsL CEA93_RS11865 PF01795 MraW methylase family CEA93_RS11875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEA93_RS11880 PF04348 LppC putative lipoprotein CEA93_RS11885 PF02021 Uncharacterised protein family UPF0102 CEA93_RS11890 PF13580 SIS domain CEA93_RS11895 PF04972 BON domain CEA93_RS11900 PF04386 Stringent starvation protein B CEA93_RS11905 PF00043 Glutathione S-transferase, C-terminal domain CEA93_RS11905 PF02798 Glutathione S-transferase, N-terminal domain CEA93_RS11910 PF02167 Cytochrome C1 family CEA93_RS11915 PF00032 Cytochrome b(C-terminal)/b6/petD CEA93_RS11915 PF00033 Cytochrome b/b6/petB CEA93_RS11920 PF00355 Rieske [2Fe-2S] domain CEA93_RS11920 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CEA93_RS11925 PF00380 Ribosomal protein S9/S16 CEA93_RS11930 PF00572 Ribosomal protein L13 CEA93_RS11940 PF03969 AFG1-like ATPase CEA93_RS11945 PF06295 Protein of unknown function (DUF1043) CEA93_RS11950 PF00595 PDZ domain CEA93_RS11955 PF13180 PDZ domain CEA93_RS11960 PF03989 DNA gyrase C-terminal domain, beta-propeller CEA93_RS11960 PF00521 DNA gyrase/topoisomerase IV, subunit A CEA93_RS11965 PF00204 DNA gyrase B CEA93_RS11965 PF00986 DNA gyrase B subunit, carboxyl terminus CEA93_RS11965 PF01751 Toprim domain CEA93_RS11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS11970 PF05728 Uncharacterised protein family (UPF0227) CEA93_RS11975 PF00149 Calcineurin-like phosphoesterase CEA93_RS11980 PF06853 Protein of unknown function (DUF1249) CEA93_RS11985 PF00293 NUDIX domain CEA93_RS11990 PF02321 Outer membrane efflux protein CEA93_RS11995 PF00294 pfkB family carbohydrate kinase CEA93_RS11995 PF01467 Cytidylyltransferase-like CEA93_RS12000 PF08335 GlnD PII-uridylyltransferase CEA93_RS12000 PF03710 Glutamate-ammonia ligase adenylyltransferase CEA93_RS12005 PF00672 HAMP domain CEA93_RS12005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS12015 PF01928 CYTH domain CEA93_RS12020 PF01865 Protein of unknown function DUF47 CEA93_RS12025 PF01384 Phosphate transporter family CEA93_RS12030 PF08239 Bacterial SH3 domain CEA93_RS12040 PF01471 Putative peptidoglycan binding domain CEA93_RS12040 PF13401 AAA domain CEA93_RS12045 PF12627 Probable RNA and SrmB- binding site of polymerase A CEA93_RS12045 PF01743 Poly A polymerase head domain CEA93_RS12045 PF01966 HD domain CEA93_RS12050 PF03952 Enolase, N-terminal domain CEA93_RS12050 PF00113 Enolase, C-terminal TIM barrel domain CEA93_RS12055 PF06418 CTP synthase N-terminus CEA93_RS12055 PF00117 Glutamine amidotransferase class-I CEA93_RS12060 PF03819 MazG nucleotide pyrophosphohydrolase domain CEA93_RS12065 PF02824 TGS domain CEA93_RS12065 PF04607 Region found in RelA / SpoT proteins CEA93_RS12065 PF13291 ACT domain CEA93_RS12070 PF01938 TRAM domain CEA93_RS12070 PF05958 tRNA (Uracil-5-)-methyltransferase CEA93_RS12075 PF00072 Response regulator receiver domain CEA93_RS12075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEA93_RS12075 PF01627 Hpt domain CEA93_RS12075 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS12075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS12075 PF00672 HAMP domain CEA93_RS12080 PF01648 4'-phosphopantetheinyl transferase superfamily CEA93_RS12085 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CEA93_RS12090 PF02565 Recombination protein O C terminal CEA93_RS12090 PF11967 Recombination protein O N terminal CEA93_RS12095 PF07650 KH domain CEA93_RS12095 PF01926 50S ribosome-binding GTPase CEA93_RS12100 PF14622 Ribonuclease-III-like CEA93_RS12100 PF00035 Double-stranded RNA binding motif CEA93_RS12105 PF10502 Signal peptidase, peptidase S26 CEA93_RS12110 PF00679 Elongation factor G C-terminus CEA93_RS12110 PF03144 Elongation factor Tu domain 2 CEA93_RS12110 PF00009 Elongation factor Tu GTP binding domain CEA93_RS12110 PF06421 GTP-binding protein LepA C-terminus CEA93_RS12120 PF17188 MucB/RseB C-terminal domain CEA93_RS12120 PF03888 MucB/RseB N-terminal domain CEA93_RS12125 PF03873 Anti sigma-E protein RseA, C-terminal domain CEA93_RS12125 PF03872 Anti sigma-E protein RseA, N-terminal domain CEA93_RS12130 PF04542 Sigma-70 region 2 CEA93_RS12130 PF08281 Sigma-70, region 4 CEA93_RS12135 PF00890 FAD binding domain CEA93_RS12135 PF02910 Fumarate reductase flavoprotein C-term CEA93_RS12145 PF03937 Flavinator of succinate dehydrogenase CEA93_RS12165 PF01494 FAD binding domain CEA93_RS12170 PF01494 FAD binding domain CEA93_RS12175 PF03695 Uncharacterised protein family (UPF0149) CEA93_RS12180 PF05164 Cell division protein ZapA CEA93_RS12190 PF01812 5-formyltetrahydrofolate cyclo-ligase family CEA93_RS12195 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEA93_RS12200 PF01842 ACT domain CEA93_RS12200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEA93_RS12200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEA93_RS12205 PF10369 Small subunit of acetolactate synthase CEA93_RS12210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEA93_RS12210 PF00205 Thiamine pyrophosphate enzyme, central domain CEA93_RS12210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEA93_RS12215 PF00501 AMP-binding enzyme CEA93_RS12220 PF03466 LysR substrate binding domain CEA93_RS12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS12230 PF01569 PAP2 superfamily CEA93_RS12235 PF08502 LeuA allosteric (dimerisation) domain CEA93_RS12235 PF00682 HMGL-like CEA93_RS12240 PF00180 Isocitrate/isopropylmalate dehydrogenase CEA93_RS12245 PF00330 Aconitase family (aconitate hydratase) CEA93_RS12250 PF00694 Aconitase C-terminal domain CEA93_RS12310 PF03739 Lipopolysaccharide export system permease LptF/LptG CEA93_RS12315 PF03739 Lipopolysaccharide export system permease LptF/LptG CEA93_RS12320 PF02789 Cytosol aminopeptidase family, N-terminal domain CEA93_RS12320 PF00883 Cytosol aminopeptidase family, catalytic domain CEA93_RS12325 PF04364 DNA polymerase III chi subunit, HolC CEA93_RS12330 PF10458 Valyl tRNA synthetase tRNA binding arm CEA93_RS12330 PF08264 Anticodon-binding domain of tRNA CEA93_RS12330 PF00133 tRNA synthetases class I (I, L, M and V) CEA93_RS12335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEA93_RS12335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEA93_RS12340 PF00849 RNA pseudouridylate synthase CEA93_RS12350 PF00176 SNF2 family N-terminal domain CEA93_RS12350 PF18337 RapA N-terminal Tudor like domain CEA93_RS12350 PF00271 Helicase conserved C-terminal domain CEA93_RS12350 PF12137 RNA polymerase recycling family C-terminal CEA93_RS12350 PF18339 RapA N-terminal Tudor like domain 1 CEA93_RS12360 PF02562 PhoH-like protein CEA93_RS12360 PF13638 PIN domain CEA93_RS12365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEA93_RS12365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEA93_RS12370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEA93_RS12370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEA93_RS12375 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEA93_RS12375 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEA93_RS12380 PF01042 Endoribonuclease L-PSP CEA93_RS12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS12390 PF00072 Response regulator receiver domain CEA93_RS12390 PF08448 PAS fold CEA93_RS12390 PF13188 PAS domain CEA93_RS12390 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS12395 PF01553 Acyltransferase CEA93_RS12400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEA93_RS12405 PF01722 BolA-like protein CEA93_RS12415 PF05494 MlaC protein CEA93_RS12420 PF02470 MlaD protein CEA93_RS12425 PF02405 Permease MlaE CEA93_RS12430 PF00005 ABC transporter CEA93_RS12435 PF01699 Sodium/calcium exchanger protein CEA93_RS12440 PF00571 CBS domain CEA93_RS12440 PF01380 SIS domain CEA93_RS12455 PF03968 OstA-like protein CEA93_RS12460 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEA93_RS12460 PF00005 ABC transporter CEA93_RS12465 PF04552 Sigma-54, DNA binding domain CEA93_RS12465 PF04963 Sigma-54 factor, core binding domain CEA93_RS12465 PF00309 Sigma-54 factor, Activator interacting domain (AID) CEA93_RS12470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEA93_RS12475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEA93_RS12480 PF03668 P-loop ATPase protein family CEA93_RS12485 PF00381 PTS HPr component phosphorylation site CEA93_RS12490 PF00571 CBS domain CEA93_RS12490 PF01769 Divalent cation transporter CEA93_RS12490 PF03448 MgtE intracellular N domain CEA93_RS12495 PF01523 Putative modulator of DNA gyrase CEA93_RS12500 PF04751 Protein of unknown function (DUF615) CEA93_RS12505 PF00005 ABC transporter CEA93_RS12510 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS12520 PF02441 Flavoprotein CEA93_RS12525 PF01225 Mur ligase family, catalytic domain CEA93_RS12525 PF02875 Mur ligase family, glutamate ligase domain CEA93_RS12525 PF08245 Mur ligase middle domain CEA93_RS12530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CEA93_RS12535 PF00719 Inorganic pyrophosphatase CEA93_RS12545 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CEA93_RS12550 PF04357 TamB, inner membrane protein subunit of TAM complex CEA93_RS12555 PF17243 POTRA domain TamA domain 1 CEA93_RS12555 PF07244 Surface antigen variable number repeat CEA93_RS12555 PF01103 Surface antigen CEA93_RS12560 PF01625 Peptide methionine sulfoxide reductase CEA93_RS12565 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CEA93_RS12580 PF00005 ABC transporter CEA93_RS12605 PF00009 Elongation factor Tu GTP binding domain CEA93_RS12610 PF01507 Phosphoadenosine phosphosulfate reductase family CEA93_RS12615 PF10414 Sirohaem synthase dimerisation region CEA93_RS12615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEA93_RS12615 PF14824 Sirohaem biosynthesis protein central CEA93_RS12620 PF00149 Calcineurin-like phosphoesterase CEA93_RS12620 PF02872 5'-nucleotidase, C-terminal domain CEA93_RS12660 PF00270 DEAD/DEAH box helicase CEA93_RS12660 PF00271 Helicase conserved C-terminal domain CEA93_RS12660 PF03880 DbpA RNA binding domain CEA93_RS12665 PF13673 Acetyltransferase (GNAT) domain CEA93_RS12670 PF04225 Opacity-associated protein A LysM-like domain CEA93_RS12670 PF08525 Opacity-associated protein A N-terminal motif CEA93_RS12675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEA93_RS12675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEA93_RS12680 PF01196 Ribosomal protein L17 CEA93_RS12685 PF01000 RNA polymerase Rpb3/RpoA insert domain CEA93_RS12685 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CEA93_RS12685 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CEA93_RS12690 PF01479 S4 domain CEA93_RS12690 PF00163 Ribosomal protein S4/S9 N-terminal domain CEA93_RS12695 PF00411 Ribosomal protein S11 CEA93_RS12700 PF00416 Ribosomal protein S13/S18 CEA93_RS12705 PF00444 Ribosomal protein L36 CEA93_RS12710 PF00344 SecY translocase CEA93_RS12715 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CEA93_RS12720 PF00327 Ribosomal protein L30p/L7e CEA93_RS12725 PF03719 Ribosomal protein S5, C-terminal domain CEA93_RS12725 PF00333 Ribosomal protein S5, N-terminal domain CEA93_RS12730 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CEA93_RS12735 PF00347 Ribosomal protein L6 CEA93_RS12740 PF00410 Ribosomal protein S8 CEA93_RS12745 PF00253 Ribosomal protein S14p/S29e CEA93_RS12750 PF00281 Ribosomal protein L5 CEA93_RS12750 PF00673 ribosomal L5P family C-terminus CEA93_RS12755 PF00467 KOW motif CEA93_RS12755 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CEA93_RS12760 PF00238 Ribosomal protein L14p/L23e CEA93_RS12765 PF00366 Ribosomal protein S17 CEA93_RS12770 PF00831 Ribosomal L29 protein CEA93_RS12775 PF00252 Ribosomal protein L16p/L10e CEA93_RS12780 PF00189 Ribosomal protein S3, C-terminal domain CEA93_RS12780 PF07650 KH domain CEA93_RS12785 PF00237 Ribosomal protein L22p/L17e CEA93_RS12790 PF00203 Ribosomal protein S19 CEA93_RS12795 PF00181 Ribosomal Proteins L2, RNA binding domain CEA93_RS12795 PF03947 Ribosomal Proteins L2, C-terminal domain CEA93_RS12800 PF00276 Ribosomal protein L23 CEA93_RS12805 PF00573 Ribosomal protein L4/L1 family CEA93_RS12810 PF00297 Ribosomal protein L3 CEA93_RS12815 PF00338 Ribosomal protein S10p/S20e CEA93_RS12820 PF00588 SpoU rRNA Methylase family CEA93_RS12820 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEA93_RS12825 PF00575 S1 RNA binding domain CEA93_RS12825 PF17876 Cold shock domain CEA93_RS12825 PF08461 Ribonuclease R winged-helix domain CEA93_RS12825 PF08206 Ribonuclease B OB domain CEA93_RS12825 PF00773 RNB domain CEA93_RS12830 PF08238 Sel1 repeat CEA93_RS12840 PF00709 Adenylosuccinate synthetase CEA93_RS12845 PF01112 Asparaginase CEA93_RS12850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEA93_RS12855 PF09526 Probable metal-binding protein (DUF2387) CEA93_RS12860 PF00999 Sodium/hydrogen exchanger family CEA93_RS12860 PF02254 TrkA-N domain CEA93_RS12865 PF02525 Flavodoxin-like fold CEA93_RS12870 PF00005 ABC transporter CEA93_RS12870 PF12848 ABC transporter CEA93_RS12880 PF00561 alpha/beta hydrolase fold CEA93_RS12885 PF06794 Uncharacterised protein family (UPF0270) CEA93_RS12890 PF00485 Phosphoribulokinase / Uridine kinase family CEA93_RS12895 PF00027 Cyclic nucleotide-binding domain CEA93_RS12895 PF13545 Crp-like helix-turn-helix domain CEA93_RS12905 PF00171 Aldehyde dehydrogenase family CEA93_RS12910 PF04958 Arginine N-succinyltransferase beta subunit CEA93_RS12920 PF00117 Glutamine amidotransferase class-I CEA93_RS12930 PF01494 FAD binding domain CEA93_RS12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS12940 PF03466 LysR substrate binding domain CEA93_RS12955 PF00579 tRNA synthetases class I (W and Y) CEA93_RS12960 PF13419 Haloacid dehalogenase-like hydrolase CEA93_RS12965 PF00834 Ribulose-phosphate 3 epimerase family CEA93_RS12970 PF02086 D12 class N6 adenine-specific DNA methyltransferase CEA93_RS12980 PF01761 3-dehydroquinate synthase CEA93_RS12985 PF01202 Shikimate kinase CEA93_RS12990 PF11741 AMIN domain CEA93_RS12990 PF03958 Bacterial type II/III secretion system short domain CEA93_RS12990 PF07660 Secretin and TonB N terminus short domain CEA93_RS12990 PF00263 Bacterial type II and III secretion system protein CEA93_RS13015 PF00905 Penicillin binding protein transpeptidase domain CEA93_RS13015 PF17092 Penicillin-binding protein OB-like domain CEA93_RS13015 PF00912 Transglycosylase CEA93_RS13020 PF03466 LysR substrate binding domain CEA93_RS13020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS13025 PF08534 Redoxin CEA93_RS13025 PF00462 Glutaredoxin CEA93_RS13030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEA93_RS13030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS13040 PF00206 Lyase CEA93_RS13040 PF00583 Acetyltransferase (GNAT) family CEA93_RS13040 PF14698 Argininosuccinate lyase C-terminal CEA93_RS13045 PF00764 Arginosuccinate synthase CEA93_RS13050 PF00696 Amino acid kinase family CEA93_RS13055 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEA93_RS13055 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEA93_RS13060 PF01546 Peptidase family M20/M25/M40 CEA93_RS13060 PF07687 Peptidase dimerisation domain CEA93_RS13065 PF00311 Phosphoenolpyruvate carboxylase CEA93_RS13075 PF06426 Serine acetyltransferase, N-terminal CEA93_RS13075 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS13080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEA93_RS13080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEA93_RS13085 PF02556 Preprotein translocase subunit SecB CEA93_RS13090 PF00581 Rhodanese-like domain CEA93_RS13095 PF00152 tRNA synthetases class II (D, K and N) CEA93_RS13100 PF02910 Fumarate reductase flavoprotein C-term CEA93_RS13100 PF00890 FAD binding domain CEA93_RS13105 PF13183 4Fe-4S dicluster domain CEA93_RS13105 PF13085 2Fe-2S iron-sulfur cluster binding domain CEA93_RS13110 PF02300 Fumarate reductase subunit C CEA93_RS13115 PF02313 Fumarate reductase subunit D CEA93_RS13120 PF01132 Elongation factor P (EF-P) OB domain CEA93_RS13120 PF09285 Elongation factor P, C-terminal CEA93_RS13120 PF08207 Elongation factor P (EF-P) KOW-like domain CEA93_RS13125 PF04055 Radical SAM superfamily CEA93_RS13130 PF02308 MgtC family CEA93_RS13140 PF00118 TCP-1/cpn60 chaperonin family CEA93_RS13145 PF00166 Chaperonin 10 Kd subunit CEA93_RS13170 PF00121 Triosephosphate isomerase CEA93_RS13175 PF01554 MatE CEA93_RS13180 PF03737 Aldolase/RraA CEA93_RS13185 PF01040 UbiA prenyltransferase family CEA93_RS13190 PF10431 C-terminal, D2-small domain, of ClpB protein CEA93_RS13190 PF07724 AAA domain (Cdc48 subfamily) CEA93_RS13190 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS13195 PF00227 Proteasome subunit CEA93_RS13205 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS13210 PF00271 Helicase conserved C-terminal domain CEA93_RS13210 PF18074 Primosomal protein N C-terminal domain CEA93_RS13210 PF17764 3′ DNA-binding domain (3′BD) CEA93_RS13210 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CEA93_RS13210 PF00270 DEAD/DEAH box helicase CEA93_RS13215 PF01197 Ribosomal protein L31 CEA93_RS13220 PF03949 Malic enzyme, NAD binding domain CEA93_RS13220 PF00390 Malic enzyme, N-terminal domain CEA93_RS13225 PF01340 Met Apo-repressor, MetJ CEA93_RS13230 PF01053 Cys/Met metabolism PLP-dependent enzyme CEA93_RS13235 PF03447 Homoserine dehydrogenase, NAD binding domain CEA93_RS13235 PF00742 Homoserine dehydrogenase CEA93_RS13235 PF00696 Amino acid kinase family CEA93_RS13240 PF02219 Methylenetetrahydrofolate reductase CEA93_RS13245 PF06005 Cell division protein ZapB CEA93_RS13250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CEA93_RS13255 PF00365 Phosphofructokinase CEA93_RS13260 PF01545 Cation efflux family CEA93_RS13260 PF16916 Dimerisation domain of Zinc Transporter CEA93_RS13270 PF00072 Response regulator receiver domain CEA93_RS13270 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS13275 PF16527 Two-component sensor protein CpxA, periplasmic domain CEA93_RS13275 PF00672 HAMP domain CEA93_RS13275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS13275 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS13280 PF00588 SpoU rRNA Methylase family CEA93_RS13285 PF00313 'Cold-shock' DNA-binding domain CEA93_RS13290 PF04186 FxsA cytoplasmic membrane protein CEA93_RS13295 PF00206 Lyase CEA93_RS13295 PF10415 Fumarase C C-terminus CEA93_RS13300 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEA93_RS13305 PF03606 C4-dicarboxylate anaerobic carrier CEA93_RS13315 PF00696 Amino acid kinase family CEA93_RS13320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEA93_RS13320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEA93_RS13330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEA93_RS13330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEA93_RS13335 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEA93_RS13335 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEA93_RS13340 PF01316 Arginine repressor, DNA binding domain CEA93_RS13340 PF02863 Arginine repressor, C-terminal domain CEA93_RS13345 PF02683 Cytochrome C biogenesis protein transmembrane region CEA93_RS13345 PF11412 Disulphide bond corrector protein DsbC CEA93_RS13350 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS13350 PF00072 Response regulator receiver domain CEA93_RS13355 PF02080 TrkA-C domain CEA93_RS13355 PF00999 Sodium/hydrogen exchanger family CEA93_RS13355 PF03471 Transporter associated domain CEA93_RS13365 PF00474 Sodium:solute symporter family CEA93_RS13370 PF00672 HAMP domain CEA93_RS13370 PF00072 Response regulator receiver domain CEA93_RS13370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS13370 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS13370 PF01627 Hpt domain CEA93_RS13375 PF12832 MFS_1 like family CEA93_RS13390 PF16177 Acetyl-coenzyme A synthetase N-terminus CEA93_RS13390 PF00501 AMP-binding enzyme CEA93_RS13390 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS13395 PF01220 Dehydroquinase class II CEA93_RS13400 PF00364 Biotin-requiring enzyme CEA93_RS13405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEA93_RS13405 PF02785 Biotin carboxylase C-terminal domain CEA93_RS13405 PF00289 Biotin carboxylase, N-terminal domain CEA93_RS13415 PF01207 Dihydrouridine synthase (Dus) CEA93_RS13420 PF02954 Bacterial regulatory protein, Fis family CEA93_RS13430 PF13411 MerR HTH family regulatory protein CEA93_RS13435 PF02142 MGS-like domain CEA93_RS13435 PF01808 AICARFT/IMPCHase bienzyme CEA93_RS13440 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CEA93_RS13440 PF02843 Phosphoribosylglycinamide synthetase, C domain CEA93_RS13440 PF02844 Phosphoribosylglycinamide synthetase, N domain CEA93_RS13450 PF00216 Bacterial DNA-binding protein CEA93_RS13455 PF01595 Cyclin M transmembrane N-terminal domain CEA93_RS13455 PF00571 CBS domain CEA93_RS13460 PF04480 Protein of unknown function (DUF559) CEA93_RS13465 PF04222 Protein of unknown function (DUF416) CEA93_RS13470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEA93_RS13475 PF00924 Mechanosensitive ion channel CEA93_RS13480 PF02743 Cache domain CEA93_RS13480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS13480 PF00672 HAMP domain CEA93_RS13485 PF00753 Metallo-beta-lactamase superfamily CEA93_RS13485 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEA93_RS13485 PF10996 Beta-Casp domain CEA93_RS13490 PF00953 Glycosyl transferase family 4 CEA93_RS13495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEA93_RS13495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEA93_RS13495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEA93_RS13500 PF01370 NAD dependent epimerase/dehydratase family CEA93_RS13505 PF13439 Glycosyltransferase Family 4 CEA93_RS13505 PF00534 Glycosyl transferases group 1 CEA93_RS13510 PF02223 Thymidylate kinase CEA93_RS13540 PF13807 G-rich domain on putative tyrosine kinase CEA93_RS13540 PF02706 Chain length determinant protein CEA93_RS13540 PF13614 AAA domain CEA93_RS13545 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEA93_RS13550 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEA93_RS13550 PF10531 SLBB domain CEA93_RS13550 PF02563 Polysaccharide biosynthesis/export protein CEA93_RS13560 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CEA93_RS13570 PF06082 Exopolysaccharide biosynthesis protein YbjH CEA93_RS13580 PF02397 Bacterial sugar transferase CEA93_RS13585 PF01370 NAD dependent epimerase/dehydratase family CEA93_RS13590 PF02719 Polysaccharide biosynthesis protein CEA93_RS13600 PF00535 Glycosyl transferase family 2 CEA93_RS13605 PF05045 Rhamnan synthesis protein F CEA93_RS13610 PF00535 Glycosyl transferase family 2 CEA93_RS13615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEA93_RS13625 PF05523 WxcM-like, C-terminal CEA93_RS13635 PF00535 Glycosyl transferase family 2 CEA93_RS13645 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEA93_RS13660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEA93_RS13665 PF16363 GDP-mannose 4,6 dehydratase CEA93_RS13670 PF00483 Nucleotidyl transferase CEA93_RS13675 PF00970 Oxidoreductase FAD-binding domain CEA93_RS13675 PF00175 Oxidoreductase NAD-binding domain CEA93_RS13675 PF00111 2Fe-2S iron-sulfur cluster binding domain CEA93_RS13695 PF00005 ABC transporter CEA93_RS13700 PF01061 ABC-2 type transporter CEA93_RS13705 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CEA93_RS13710 PF04321 RmlD substrate binding domain CEA93_RS13715 PF00483 Nucleotidyl transferase CEA93_RS13720 PF16363 GDP-mannose 4,6 dehydratase CEA93_RS13725 PF01370 NAD dependent epimerase/dehydratase family CEA93_RS13735 PF04932 O-Antigen ligase CEA93_RS13740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEA93_RS13750 PF04488 Glycosyltransferase sugar-binding region containing DXD motif CEA93_RS13755 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CEA93_RS13760 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS13765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEA93_RS13785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEA93_RS13790 PF00535 Glycosyl transferase family 2 CEA93_RS13795 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEA93_RS13800 PF01467 Cytidylyltransferase-like CEA93_RS13805 PF06827 Zinc finger found in FPG and IleRS CEA93_RS13805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEA93_RS13805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEA93_RS13815 PF00471 Ribosomal protein L33 CEA93_RS13820 PF00830 Ribosomal L28 family CEA93_RS13825 PF04002 RadC-like JAB domain CEA93_RS13830 PF04127 DNA / pantothenate metabolism flavoprotein CEA93_RS13830 PF02441 Flavoprotein CEA93_RS13835 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS13840 PF03279 Bacterial lipid A biosynthesis acyltransferase CEA93_RS13845 PF03279 Bacterial lipid A biosynthesis acyltransferase CEA93_RS13850 PF00156 Phosphoribosyl transferase domain CEA93_RS13855 PF01138 3' exoribonuclease family, domain 1 CEA93_RS13855 PF03725 3' exoribonuclease family, domain 2 CEA93_RS13860 PF08340 Domain of unknown function (DUF1732) CEA93_RS13860 PF03755 YicC-like family, N-terminal region CEA93_RS13950 PF13007 Transposase C of IS166 homeodomain CEA93_RS13950 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS13950 PF03050 Transposase IS66 family CEA93_RS13950 PF13817 IS66 C-terminal element CEA93_RS13970 PF13333 Integrase core domain CEA93_RS13970 PF00665 Integrase core domain CEA93_RS13970 PF13276 HTH-like domain CEA93_RS13975 PF13007 Transposase C of IS166 homeodomain CEA93_RS13975 PF13817 IS66 C-terminal element CEA93_RS13975 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS13975 PF03050 Transposase IS66 family CEA93_RS13995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEA93_RS14010 PF00675 Insulinase (Peptidase family M16) CEA93_RS14010 PF05193 Peptidase M16 inactive domain CEA93_RS14015 PF13737 Transposase DDE domain CEA93_RS14025 PF01032 FecCD transport family CEA93_RS14030 PF01497 Periplasmic binding protein CEA93_RS14035 PF00005 ABC transporter CEA93_RS14040 PF07715 TonB-dependent Receptor Plug Domain CEA93_RS14040 PF00593 TonB dependent receptor CEA93_RS14045 PF00005 ABC transporter CEA93_RS14045 PF00664 ABC transporter transmembrane region CEA93_RS14050 PF00367 phosphotransferase system, EIIB CEA93_RS14050 PF02378 Phosphotransferase system, EIIC CEA93_RS14055 PF01380 SIS domain CEA93_RS14060 PF01418 Helix-turn-helix domain, rpiR family CEA93_RS14060 PF01380 SIS domain CEA93_RS14075 PF00270 DEAD/DEAH box helicase CEA93_RS14075 PF00271 Helicase conserved C-terminal domain CEA93_RS14075 PF00570 HRDC domain CEA93_RS14075 PF16124 RecQ zinc-binding CEA93_RS14075 PF09382 RQC domain CEA93_RS14080 PF00892 EamA-like transporter family CEA93_RS14095 PF13361 UvrD-like helicase C-terminal domain CEA93_RS14095 PF00580 UvrD/REP helicase N-terminal domain CEA93_RS14100 PF01432 Peptidase family M3 CEA93_RS14105 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CEA93_RS14110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEA93_RS14110 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS14125 PF13737 Transposase DDE domain CEA93_RS14140 PF07693 KAP family P-loop domain CEA93_RS14150 PF03050 Transposase IS66 family CEA93_RS14150 PF13817 IS66 C-terminal element CEA93_RS14150 PF13007 Transposase C of IS166 homeodomain CEA93_RS14150 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS14170 PF04245 37-kD nucleoid-associated bacterial protein CEA93_RS14190 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS14190 PF13817 IS66 C-terminal element CEA93_RS14190 PF03050 Transposase IS66 family CEA93_RS14190 PF13007 Transposase C of IS166 homeodomain CEA93_RS14230 PF00072 Response regulator receiver domain CEA93_RS14245 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS14245 PF12911 N-terminal TM domain of oligopeptide transport permease C CEA93_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS14255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEA93_RS14260 PF00005 ABC transporter CEA93_RS14260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEA93_RS14290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEA93_RS14295 PF13361 UvrD-like helicase C-terminal domain CEA93_RS14295 PF00580 UvrD/REP helicase N-terminal domain CEA93_RS14300 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS14300 PF08359 YsiA-like protein, C-terminal region CEA93_RS14305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS14310 PF00873 AcrB/AcrD/AcrF family CEA93_RS14315 PF04380 Membrane fusogenic activity CEA93_RS14320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CEA93_RS14320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CEA93_RS14325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS14325 PF03466 LysR substrate binding domain CEA93_RS14330 PF06969 HemN C-terminal domain CEA93_RS14330 PF04055 Radical SAM superfamily CEA93_RS14335 PF10675 Protein of unknown function (DUF2489) CEA93_RS14340 PF04220 Der GTPase activator (YihI) CEA93_RS14350 PF00034 Cytochrome c CEA93_RS14355 PF01926 50S ribosome-binding GTPase CEA93_RS14360 PF01612 3'-5' exonuclease CEA93_RS14360 PF00476 DNA polymerase family A CEA93_RS14360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEA93_RS14360 PF01367 5'-3' exonuclease, C-terminal SAM fold CEA93_RS14365 PF00490 Delta-aminolevulinic acid dehydratase CEA93_RS14370 PF01026 TatD related DNase CEA93_RS14375 PF00902 Sec-independent protein translocase protein (TatC) CEA93_RS14380 PF02416 mttA/Hcf106 family CEA93_RS14385 PF02416 mttA/Hcf106 family CEA93_RS14390 PF03109 ABC1 family CEA93_RS14395 PF02036 SCP-2 sterol transfer family CEA93_RS14400 PF01209 ubiE/COQ5 methyltransferase family CEA93_RS14405 PF02646 RmuC family CEA93_RS14415 PF12833 Helix-turn-helix domain CEA93_RS14415 PF02311 AraC-like ligand binding domain CEA93_RS14425 PF02610 L-arabinose isomerase CEA93_RS14425 PF11762 L-arabinose isomerase C-terminal domain CEA93_RS14430 PF00596 Class II Aldolase and Adducin N-terminal domain CEA93_RS14435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEA93_RS14435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEA93_RS14440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEA93_RS14445 PF00005 ABC transporter CEA93_RS14450 PF02653 Branched-chain amino acid transport system / permease component CEA93_RS14455 PF06414 Zeta toxin CEA93_RS14470 PF10625 Universal stress protein B (UspB) CEA93_RS14475 PF00210 Ferritin-like domain CEA93_RS14480 PF00582 Universal stress protein family CEA93_RS14485 PF00892 EamA-like transporter family CEA93_RS14495 PF04445 Putative SAM-dependent methyltransferase CEA93_RS14500 PF01037 Lrp/AsnC ligand binding domain CEA93_RS14510 PF13737 Transposase DDE domain CEA93_RS14515 PF07690 Major Facilitator Superfamily CEA93_RS14520 PF03466 LysR substrate binding domain CEA93_RS14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS14525 PF01321 Creatinase/Prolidase N-terminal domain CEA93_RS14525 PF00557 Metallopeptidase family M24 CEA93_RS14525 PF01321 Creatinase/Prolidase N-terminal domain CEA93_RS14525 PF00557 Metallopeptidase family M24 CEA93_RS14530 PF04055 Radical SAM superfamily CEA93_RS14530 PF06968 Biotin and Thiamin Synthesis associated domain CEA93_RS14535 PF05690 Thiazole biosynthesis protein ThiG CEA93_RS14540 PF02597 ThiS family CEA93_RS14545 PF00899 ThiF family CEA93_RS14550 PF02581 Thiamine monophosphate synthase CEA93_RS14555 PF13667 ThiC-associated domain CEA93_RS14555 PF01964 Radical SAM ThiC family CEA93_RS14560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEA93_RS14605 PF12724 Flavodoxin domain CEA93_RS14610 PF02386 Cation transport protein CEA93_RS14615 PF01205 Uncharacterized protein family UPF0029 CEA93_RS14615 PF09186 Domain of unknown function (DUF1949) CEA93_RS14620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEA93_RS14620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEA93_RS14620 PF00378 Enoyl-CoA hydratase/isomerase CEA93_RS14625 PF00108 Thiolase, N-terminal domain CEA93_RS14625 PF02803 Thiolase, C-terminal domain CEA93_RS14630 PF03466 LysR substrate binding domain CEA93_RS14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS14635 PF07690 Major Facilitator Superfamily CEA93_RS14640 PF12804 MobA-like NTP transferase domain CEA93_RS14640 PF14602 Hexapeptide repeat of succinyl-transferase CEA93_RS14640 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS14645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEA93_RS14645 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CEA93_RS14650 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEA93_RS14650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEA93_RS14655 PF00231 ATP synthase CEA93_RS14660 PF00306 ATP synthase alpha/beta chain, C terminal domain CEA93_RS14660 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEA93_RS14660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEA93_RS14665 PF00213 ATP synthase delta (OSCP) subunit CEA93_RS14670 PF00430 ATP synthase B/B' CF(0) CEA93_RS14675 PF00137 ATP synthase subunit C CEA93_RS14680 PF00119 ATP synthase A chain CEA93_RS14685 PF03899 ATP synthase I chain CEA93_RS14690 PF17762 HTH domain found in ParB protein CEA93_RS14690 PF02195 ParB-like nuclease domain CEA93_RS14695 PF13614 AAA domain CEA93_RS14700 PF02527 rRNA small subunit methyltransferase G CEA93_RS14705 PF13932 GidA associated domain CEA93_RS14705 PF01134 Glucose inhibited division protein A CEA93_RS14730 PF01709 Transcriptional regulator CEA93_RS14735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEA93_RS14735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEA93_RS14740 PF03222 Tryptophan/tyrosine permease family CEA93_RS14770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS14770 PF03466 LysR substrate binding domain CEA93_RS14775 PF13460 NAD(P)H-binding CEA93_RS14785 PF03733 Inner membrane component domain CEA93_RS14800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEA93_RS14800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEA93_RS14805 PF06029 AlkA N-terminal domain CEA93_RS14805 PF00730 HhH-GPD superfamily base excision DNA repair protein CEA93_RS14810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS14810 PF03466 LysR substrate binding domain CEA93_RS14825 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEA93_RS14835 PF04225 Opacity-associated protein A LysM-like domain CEA93_RS14835 PF01551 Peptidase family M23 CEA93_RS14840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEA93_RS14840 PF02378 Phosphotransferase system, EIIC CEA93_RS14840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEA93_RS14845 PF01232 Mannitol dehydrogenase Rossmann domain CEA93_RS14845 PF08125 Mannitol dehydrogenase C-terminal domain CEA93_RS14850 PF05068 Mannitol repressor CEA93_RS14855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEA93_RS14860 PF03600 Citrate transporter CEA93_RS14865 PF00375 Sodium:dicarboxylate symporter family CEA93_RS14870 PF07681 DoxX CEA93_RS14890 PF00529 HlyD membrane-fusion protein of T1SS CEA93_RS14890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS14895 PF01047 MarR family CEA93_RS14900 PF04393 Protein of unknown function (DUF535) CEA93_RS14905 PF00563 EAL domain CEA93_RS14905 PF12792 CSS motif domain associated with EAL CEA93_RS14910 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CEA93_RS14915 PF00581 Rhodanese-like domain CEA93_RS14925 PF00005 ABC transporter CEA93_RS14940 PF00005 ABC transporter CEA93_RS14940 PF08402 TOBE domain CEA93_RS14950 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS14965 PF00392 Bacterial regulatory proteins, gntR family CEA93_RS14965 PF07702 UTRA domain CEA93_RS14970 PF00271 Helicase conserved C-terminal domain CEA93_RS14970 PF00270 DEAD/DEAH box helicase CEA93_RS14975 PF01042 Endoribonuclease L-PSP CEA93_RS14980 PF13419 Haloacid dehalogenase-like hydrolase CEA93_RS14990 PF04055 Radical SAM superfamily CEA93_RS14995 PF11230 Protein of unknown function (DUF3029) CEA93_RS15005 PF00107 Zinc-binding dehydrogenase CEA93_RS15005 PF16884 N-terminal domain of oxidoreductase CEA93_RS15010 PF16925 Tetracyclin repressor-like, C-terminal domain CEA93_RS15010 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS15025 PF00072 Response regulator receiver domain CEA93_RS15025 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS15035 PF00849 RNA pseudouridylate synthase CEA93_RS15045 PF13737 Transposase DDE domain CEA93_RS15055 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CEA93_RS15065 PF05947 Type VI secretion system, TssF CEA93_RS15085 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CEA93_RS15095 PF10431 C-terminal, D2-small domain, of ClpB protein CEA93_RS15095 PF17871 AAA lid domain CEA93_RS15095 PF07724 AAA domain (Cdc48 subfamily) CEA93_RS15095 PF00004 ATPase family associated with various cellular activities (AAA) CEA93_RS15100 PF00158 Sigma-54 interaction domain CEA93_RS15100 PF02954 Bacterial regulatory protein, Fis family CEA93_RS15115 PF06761 Intracellular multiplication and human macrophage-killing CEA93_RS15115 PF14331 ImcF-related N-terminal domain CEA93_RS15115 PF06744 Type VI secretion protein IcmF C-terminal CEA93_RS15125 PF04717 Type VI secretion system, phage-baseplate injector CEA93_RS15125 PF16671 Actin cross-linking domain CEA93_RS15180 PF00939 Sodium:sulfate symporter transmembrane region CEA93_RS15185 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CEA93_RS15190 PF00704 Glycosyl hydrolases family 18 CEA93_RS15190 PF08329 Chitinase A, N-terminal domain CEA93_RS15195 PF07702 UTRA domain CEA93_RS15195 PF00392 Bacterial regulatory proteins, gntR family CEA93_RS15200 PF00005 ABC transporter CEA93_RS15210 PF02743 Cache domain CEA93_RS15210 PF00672 HAMP domain CEA93_RS15210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS15225 PF02743 Cache domain CEA93_RS15225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS15225 PF00672 HAMP domain CEA93_RS15240 PF01569 PAP2 superfamily CEA93_RS15245 PF04286 Protein of unknown function (DUF445) CEA93_RS15250 PF00664 ABC transporter transmembrane region CEA93_RS15250 PF00005 ABC transporter CEA93_RS15260 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS15260 PF00563 EAL domain CEA93_RS15260 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS15270 PF01261 Xylose isomerase-like TIM barrel CEA93_RS15275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEA93_RS15285 PF00596 Class II Aldolase and Adducin N-terminal domain CEA93_RS15290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEA93_RS15295 PF03611 PTS system sugar-specific permease component CEA93_RS15300 PF00455 DeoR C terminal sensor domain CEA93_RS15300 PF08220 DeoR-like helix-turn-helix domain CEA93_RS15310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEA93_RS15310 PF00128 Alpha amylase, catalytic domain CEA93_RS15315 PF02264 LamB porin CEA93_RS15330 PF13737 Transposase DDE domain CEA93_RS15340 PF01547 Bacterial extracellular solute-binding protein CEA93_RS15345 PF03466 LysR substrate binding domain CEA93_RS15345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS15350 PF00128 Alpha amylase, catalytic domain CEA93_RS15360 PF00375 Sodium:dicarboxylate symporter family CEA93_RS15370 PF02630 SCO1/SenC CEA93_RS15385 PF03616 Sodium/glutamate symporter CEA93_RS15390 PF12945 Flagellar protein YcgR CEA93_RS15390 PF07238 PilZ domain CEA93_RS15410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS15410 PF00529 HlyD membrane-fusion protein of T1SS CEA93_RS15415 PF11742 Protein of unknown function (DUF3302) CEA93_RS15420 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS15435 PF01048 Phosphorylase superfamily CEA93_RS15440 PF08349 Protein of unknown function (DUF1722) CEA93_RS15445 PF13411 MerR HTH family regulatory protein CEA93_RS15450 PF03441 FAD binding domain of DNA photolyase CEA93_RS15450 PF00875 DNA photolyase CEA93_RS15455 PF03734 L,D-transpeptidase catalytic domain CEA93_RS15455 PF17969 L,D-transpeptidase C-terminal domain CEA93_RS15455 PF01476 LysM domain CEA93_RS15465 PF00271 Helicase conserved C-terminal domain CEA93_RS15465 PF00270 DEAD/DEAH box helicase CEA93_RS15475 PF07715 TonB-dependent Receptor Plug Domain CEA93_RS15475 PF00593 TonB dependent receptor CEA93_RS15495 PF14319 Transposase zinc-binding domain CEA93_RS15495 PF04986 Putative transposase CEA93_RS15500 PF00128 Alpha amylase, catalytic domain CEA93_RS15505 PF00248 Aldo/keto reductase family CEA93_RS15515 PF12704 MacB-like periplasmic core domain CEA93_RS15515 PF00005 ABC transporter CEA93_RS15515 PF02687 FtsX-like permease family CEA93_RS15520 PF02687 FtsX-like permease family CEA93_RS15520 PF12704 MacB-like periplasmic core domain CEA93_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS15535 PF06580 Histidine kinase CEA93_RS15540 PF00072 Response regulator receiver domain CEA93_RS15540 PF04397 LytTr DNA-binding domain CEA93_RS15545 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS15545 PF00360 Phytochrome region CEA93_RS15545 PF01590 GAF domain CEA93_RS15545 PF00563 EAL domain CEA93_RS15555 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEA93_RS15565 PF00072 Response regulator receiver domain CEA93_RS15570 PF00672 HAMP domain CEA93_RS15570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEA93_RS15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS15570 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS15570 PF01627 Hpt domain CEA93_RS15570 PF00072 Response regulator receiver domain CEA93_RS15575 PF00672 HAMP domain CEA93_RS15575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS15580 PF13520 Amino acid permease CEA93_RS15595 PF03063 Prismane/CO dehydrogenase family CEA93_RS15600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEA93_RS15600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEA93_RS15605 PF00072 Response regulator receiver domain CEA93_RS15605 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS15605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEA93_RS15605 PF00672 HAMP domain CEA93_RS15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS15605 PF01627 Hpt domain CEA93_RS15620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS15625 PF00873 AcrB/AcrD/AcrF family CEA93_RS15635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEA93_RS15640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEA93_RS15645 PF02566 OsmC-like protein CEA93_RS15650 PF12464 Maltose acetyltransferase CEA93_RS15650 PF14602 Hexapeptide repeat of succinyl-transferase CEA93_RS15655 PF00892 EamA-like transporter family CEA93_RS15665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS15665 PF03466 LysR substrate binding domain CEA93_RS15670 PF08241 Methyltransferase domain CEA93_RS15675 PF03466 LysR substrate binding domain CEA93_RS15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS15680 PF13193 AMP-binding enzyme C-terminal domain CEA93_RS15680 PF00501 AMP-binding enzyme CEA93_RS15685 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CEA93_RS15690 PF01329 Pterin 4 alpha carbinolamine dehydratase CEA93_RS15695 PF02743 Cache domain CEA93_RS15695 PF00672 HAMP domain CEA93_RS15695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS15700 PF01554 MatE CEA93_RS15705 PF12833 Helix-turn-helix domain CEA93_RS15705 PF02311 AraC-like ligand binding domain CEA93_RS15710 PF11849 Domain of unknown function (DUF3369) CEA93_RS15715 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS15715 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS15725 PF07690 Major Facilitator Superfamily CEA93_RS15735 PF00012 Hsp70 protein CEA93_RS15745 PF01037 Lrp/AsnC ligand binding domain CEA93_RS15750 PF00657 GDSL-like Lipase/Acylhydrolase CEA93_RS15755 PF07968 Leukocidin/Hemolysin toxin family CEA93_RS15755 PF12563 Hemolytic toxin N terminal CEA93_RS15755 PF16458 Beta-prism lectin CEA93_RS15760 PF00561 alpha/beta hydrolase fold CEA93_RS15765 PF03280 Proteobacterial lipase chaperone protein CEA93_RS15770 PF05547 Immune inhibitor A peptidase M6 CEA93_RS15770 PF00801 PKD domain CEA93_RS15785 PF08453 Peptidase family M9 N-terminal CEA93_RS15785 PF01752 Collagenase CEA93_RS15785 PF04151 Bacterial pre-peptidase C-terminal domain CEA93_RS15795 PF01497 Periplasmic binding protein CEA93_RS15800 PF01032 FecCD transport family CEA93_RS15805 PF01032 FecCD transport family CEA93_RS15810 PF00005 ABC transporter CEA93_RS15815 PF00871 Acetokinase family CEA93_RS15820 PF00579 tRNA synthetases class I (W and Y) CEA93_RS15825 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS15855 PF13817 IS66 C-terminal element CEA93_RS15855 PF03050 Transposase IS66 family CEA93_RS15855 PF13007 Transposase C of IS166 homeodomain CEA93_RS15855 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS15860 PF03193 RsgA GTPase CEA93_RS15870 PF08241 Methyltransferase domain CEA93_RS15875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS15875 PF00672 HAMP domain CEA93_RS15880 PF03741 Integral membrane protein TerC family CEA93_RS15890 PF02525 Flavodoxin-like fold CEA93_RS15895 PF00248 Aldo/keto reductase family CEA93_RS15900 PF03466 LysR substrate binding domain CEA93_RS15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS15920 PF00529 HlyD membrane-fusion protein of T1SS CEA93_RS15920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS15935 PF02347 Glycine cleavage system P-protein CEA93_RS15940 PF01597 Glycine cleavage H-protein CEA93_RS15945 PF00464 Serine hydroxymethyltransferase CEA93_RS15955 PF01571 Aminomethyltransferase folate-binding domain CEA93_RS15955 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEA93_RS15970 PF05193 Peptidase M16 inactive domain CEA93_RS15970 PF00675 Insulinase (Peptidase family M16) CEA93_RS15985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEA93_RS15985 PF02378 Phosphotransferase system, EIIC CEA93_RS15990 PF00294 pfkB family carbohydrate kinase CEA93_RS15995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEA93_RS15995 PF00381 PTS HPr component phosphorylation site CEA93_RS16000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEA93_RS16000 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS16005 PF12320 Type 5 capsule protein repressor C-terminal domain CEA93_RS16005 PF00149 Calcineurin-like phosphoesterase CEA93_RS16010 PF13476 AAA domain CEA93_RS16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS16015 PF00072 Response regulator receiver domain CEA93_RS16020 PF00155 Aminotransferase class I and II CEA93_RS16030 PF00654 Voltage gated chloride channel CEA93_RS16035 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEA93_RS16035 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEA93_RS16040 PF00005 ABC transporter CEA93_RS16045 PF00005 ABC transporter CEA93_RS16045 PF02687 FtsX-like permease family CEA93_RS16045 PF12704 MacB-like periplasmic core domain CEA93_RS16050 PF00005 ABC transporter CEA93_RS16050 PF12704 MacB-like periplasmic core domain CEA93_RS16050 PF02687 FtsX-like permease family CEA93_RS16065 PF01926 50S ribosome-binding GTPase CEA93_RS16075 PF01764 Lipase (class 3) CEA93_RS16095 PF03608 PTS system enzyme II sorbitol-specific factor CEA93_RS16100 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CEA93_RS16100 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CEA93_RS16105 PF03829 PTS system glucitol/sorbitol-specific IIA component CEA93_RS16110 PF00106 short chain dehydrogenase CEA93_RS16115 PF06923 Glucitol operon activator protein (GutM) CEA93_RS16120 PF08220 DeoR-like helix-turn-helix domain CEA93_RS16120 PF00455 DeoR C terminal sensor domain CEA93_RS16125 PF03608 PTS system enzyme II sorbitol-specific factor CEA93_RS16130 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CEA93_RS16130 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CEA93_RS16135 PF03829 PTS system glucitol/sorbitol-specific IIA component CEA93_RS16140 PF17912 MalK OB fold domain CEA93_RS16140 PF00005 ABC transporter CEA93_RS16140 PF03459 TOBE domain CEA93_RS16150 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS16150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEA93_RS16160 PF13416 Bacterial extracellular solute-binding protein CEA93_RS16165 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS16170 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS16175 PF00128 Alpha amylase, catalytic domain CEA93_RS16175 PF02903 Alpha amylase, N-terminal ig-like domain CEA93_RS16195 PF07549 SecD/SecF GG Motif CEA93_RS16195 PF13721 SecD export protein N-terminal TM region CEA93_RS16195 PF02355 Protein export membrane protein CEA93_RS16200 PF02355 Protein export membrane protein CEA93_RS16200 PF07549 SecD/SecF GG Motif CEA93_RS16210 PF03264 NapC/NirT cytochrome c family, N-terminal region CEA93_RS16215 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CEA93_RS16220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEA93_RS16220 PF01568 Molydopterin dinucleotide binding domain CEA93_RS16220 PF00384 Molybdopterin oxidoreductase CEA93_RS16230 PF13187 4Fe-4S dicluster domain CEA93_RS16230 PF12838 4Fe-4S dicluster domain CEA93_RS16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS16235 PF00672 HAMP domain CEA93_RS16235 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEA93_RS16235 PF07730 Histidine kinase CEA93_RS16240 PF00072 Response regulator receiver domain CEA93_RS16240 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS16245 PF03606 C4-dicarboxylate anaerobic carrier CEA93_RS16270 PF01695 IstB-like ATP binding protein CEA93_RS16290 PF03050 Transposase IS66 family CEA93_RS16290 PF13817 IS66 C-terminal element CEA93_RS16290 PF13007 Transposase C of IS166 homeodomain CEA93_RS16290 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS16295 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEA93_RS16310 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CEA93_RS16370 PF00145 C-5 cytosine-specific DNA methylase CEA93_RS16370 PF18284 DNA methylase N-terminal domain CEA93_RS16395 PF00589 Phage integrase family CEA93_RS16395 PF14659 Phage integrase, N-terminal SAM-like domain CEA93_RS16405 PF01575 MaoC like domain CEA93_RS16410 PF12849 PBP superfamily domain CEA93_RS16420 PF00773 RNB domain CEA93_RS16420 PF00575 S1 RNA binding domain CEA93_RS16420 PF08206 Ribonuclease B OB domain CEA93_RS16425 PF00271 Helicase conserved C-terminal domain CEA93_RS16425 PF03880 DbpA RNA binding domain CEA93_RS16425 PF00270 DEAD/DEAH box helicase CEA93_RS16430 PF02824 TGS domain CEA93_RS16430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEA93_RS16430 PF03129 Anticodon binding domain CEA93_RS16430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEA93_RS16435 PF00707 Translation initiation factor IF-3, C-terminal domain CEA93_RS16435 PF05198 Translation initiation factor IF-3, N-terminal domain CEA93_RS16440 PF01632 Ribosomal protein L35 CEA93_RS16445 PF00453 Ribosomal protein L20 CEA93_RS16450 PF13495 Phage integrase, N-terminal SAM-like domain CEA93_RS16450 PF00589 Phage integrase family CEA93_RS16455 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS16455 PF13007 Transposase C of IS166 homeodomain CEA93_RS16455 PF03050 Transposase IS66 family CEA93_RS16455 PF13817 IS66 C-terminal element CEA93_RS16490 PF13817 IS66 C-terminal element CEA93_RS16490 PF13007 Transposase C of IS166 homeodomain CEA93_RS16490 PF03050 Transposase IS66 family CEA93_RS16490 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS16505 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS16505 PF13817 IS66 C-terminal element CEA93_RS16505 PF13007 Transposase C of IS166 homeodomain CEA93_RS16505 PF03050 Transposase IS66 family CEA93_RS16715 PF08212 Lipocalin-like domain CEA93_RS16785 PF13817 IS66 C-terminal element CEA93_RS16785 PF13007 Transposase C of IS166 homeodomain CEA93_RS16785 PF03050 Transposase IS66 family CEA93_RS16785 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS16815 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CEA93_RS16855 PF13737 Transposase DDE domain CEA93_RS17060 PF01253 Translation initiation factor SUI1 CEA93_RS17075 PF07478 D-ala D-ala ligase C-terminus CEA93_RS17075 PF01820 D-ala D-ala ligase N-terminus CEA93_RS17085 PF13380 CoA binding domain CEA93_RS17085 PF00583 Acetyltransferase (GNAT) family CEA93_RS17085 PF13607 Succinyl-CoA ligase like flavodoxin domain CEA93_RS17110 PF03050 Transposase IS66 family CEA93_RS17110 PF13817 IS66 C-terminal element CEA93_RS17110 PF13007 Transposase C of IS166 homeodomain CEA93_RS17110 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS17125 PF03701 Uncharacterised protein family (UPF0181) CEA93_RS17140 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS17140 PF00072 Response regulator receiver domain CEA93_RS17150 PF02233 NAD(P) transhydrogenase beta subunit CEA93_RS17155 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CEA93_RS17155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEA93_RS17155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEA93_RS17170 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS17175 PF00313 'Cold-shock' DNA-binding domain CEA93_RS17185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS17185 PF17200 Single Cache domain 2 CEA93_RS17185 PF00672 HAMP domain CEA93_RS17205 PF02798 Glutathione S-transferase, N-terminal domain CEA93_RS17205 PF00043 Glutathione S-transferase, C-terminal domain CEA93_RS17220 PF00132 Bacterial transferase hexapeptide (six repeats) CEA93_RS17220 PF12804 MobA-like NTP transferase domain CEA93_RS17220 PF03479 Plants and Prokaryotes Conserved (PCC) domain CEA93_RS17225 PF12848 ABC transporter CEA93_RS17225 PF00005 ABC transporter CEA93_RS17230 PF12793 Sugar transport-related sRNA regulator N-term CEA93_RS17230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEA93_RS17240 PF03061 Thioesterase superfamily CEA93_RS17250 PF03831 PhnA domain CEA93_RS17250 PF08274 PhnA Zinc-Ribbon CEA93_RS17275 PF03050 Transposase IS66 family CEA93_RS17275 PF13817 IS66 C-terminal element CEA93_RS17275 PF13007 Transposase C of IS166 homeodomain CEA93_RS17275 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS17290 PF13599 Pentapeptide repeats (9 copies) CEA93_RS17300 PF13817 IS66 C-terminal element CEA93_RS17300 PF13007 Transposase C of IS166 homeodomain CEA93_RS17300 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS17300 PF03050 Transposase IS66 family CEA93_RS17390 PF03050 Transposase IS66 family CEA93_RS17390 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS17390 PF13007 Transposase C of IS166 homeodomain CEA93_RS17390 PF13817 IS66 C-terminal element CEA93_RS17515 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CEA93_RS17555 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS17555 PF13817 IS66 C-terminal element CEA93_RS17555 PF03050 Transposase IS66 family CEA93_RS17555 PF13007 Transposase C of IS166 homeodomain CEA93_RS17570 PF08242 Methyltransferase domain CEA93_RS17575 PF01479 S4 domain CEA93_RS17575 PF00849 RNA pseudouridylate synthase CEA93_RS17590 PF03050 Transposase IS66 family CEA93_RS17590 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS17590 PF13817 IS66 C-terminal element CEA93_RS17590 PF13007 Transposase C of IS166 homeodomain CEA93_RS17595 PF03741 Integral membrane protein TerC family CEA93_RS17600 PF00149 Calcineurin-like phosphoesterase CEA93_RS17600 PF02872 5'-nucleotidase, C-terminal domain CEA93_RS17605 PF11398 Protein of unknown function (DUF2813) CEA93_RS17610 PF06496 Protein of unknown function (DUF1097) CEA93_RS17615 PF03466 LysR substrate binding domain CEA93_RS17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS17620 PF01226 Formate/nitrite transporter CEA93_RS17630 PF00854 POT family CEA93_RS17640 PF07702 UTRA domain CEA93_RS17640 PF00392 Bacterial regulatory proteins, gntR family CEA93_RS17645 PF01272 Transcription elongation factor, GreA/GreB, C-term CEA93_RS17645 PF14760 Rnk N-terminus CEA93_RS17650 PF13419 Haloacid dehalogenase-like hydrolase CEA93_RS17665 PF00037 4Fe-4S binding domain CEA93_RS17665 PF11953 Domain of unknown function (DUF3470) CEA93_RS17670 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEA93_RS17670 PF00588 SpoU rRNA Methylase family CEA93_RS17675 PF01268 Formate--tetrahydrofolate ligase CEA93_RS17680 PF01625 Peptide methionine sulfoxide reductase CEA93_RS17680 PF01641 SelR domain CEA93_RS17685 PF01227 GTP cyclohydrolase I CEA93_RS17695 PF00899 ThiF family CEA93_RS17700 PF00581 Rhodanese-like domain CEA93_RS17705 PF00704 Glycosyl hydrolases family 18 CEA93_RS17705 PF08329 Chitinase A, N-terminal domain CEA93_RS17715 PF00923 Transaldolase/Fructose-6-phosphate aldolase CEA93_RS17720 PF02779 Transketolase, pyrimidine binding domain CEA93_RS17720 PF02780 Transketolase, C-terminal domain CEA93_RS17720 PF00456 Transketolase, thiamine diphosphate binding domain CEA93_RS17735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEA93_RS17735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEA93_RS17740 PF13419 Haloacid dehalogenase-like hydrolase CEA93_RS17745 PF12729 Four helix bundle sensory module for signal transduction CEA93_RS17745 PF00672 HAMP domain CEA93_RS17745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS17750 PF04264 YceI-like domain CEA93_RS17755 PF01292 Prokaryotic cytochrome b561 CEA93_RS17765 PF01590 GAF domain CEA93_RS17765 PF00360 Phytochrome region CEA93_RS17765 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS17765 PF00563 EAL domain CEA93_RS17770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEA93_RS17770 PF00005 ABC transporter CEA93_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS17775 PF12911 N-terminal TM domain of oligopeptide transport permease C CEA93_RS17780 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS17785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEA93_RS17800 PF08443 RimK-like ATP-grasp domain CEA93_RS17800 PF18030 RimK PreATP-grasp domain CEA93_RS17805 PF00155 Aminotransferase class I and II CEA93_RS17815 PF13597 Anaerobic ribonucleoside-triphosphate reductase CEA93_RS17815 PF03477 ATP cone domain CEA93_RS17830 PF13007 Transposase C of IS166 homeodomain CEA93_RS17830 PF13005 zinc-finger binding domain of transposase IS66 CEA93_RS17830 PF13817 IS66 C-terminal element CEA93_RS17830 PF03050 Transposase IS66 family CEA93_RS17835 PF00589 Phage integrase family CEA93_RS17835 PF02899 Phage integrase, N-terminal SAM-like domain CEA93_RS17855 PF13538 UvrD-like helicase C-terminal domain CEA93_RS17865 PF12462 DNA helicase IV / RNA helicase N terminal CEA93_RS17865 PF00580 UvrD/REP helicase N-terminal domain CEA93_RS17865 PF13361 UvrD-like helicase C-terminal domain CEA93_RS17895 PF01381 Helix-turn-helix CEA93_RS17905 PF07804 HipA-like C-terminal domain CEA93_RS17905 PF13657 HipA N-terminal domain CEA93_RS17930 PF13737 Transposase DDE domain CEA93_RS17960 PF03477 ATP cone domain CEA93_RS17960 PF13597 Anaerobic ribonucleoside-triphosphate reductase CEA93_RS17965 PF03477 ATP cone domain CEA93_RS17965 PF13597 Anaerobic ribonucleoside-triphosphate reductase CEA93_RS17970 PF07694 5TMR of 5TMR-LYT CEA93_RS17970 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS17975 PF00873 AcrB/AcrD/AcrF family CEA93_RS17980 PF00529 HlyD membrane-fusion protein of T1SS CEA93_RS17980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEA93_RS17990 PF04143 Sulphur transport CEA93_RS18010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEA93_RS18010 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS18015 PF13657 HipA N-terminal domain CEA93_RS18015 PF07804 HipA-like C-terminal domain CEA93_RS18020 PF00376 MerR family regulatory protein CEA93_RS18020 PF09278 MerR, DNA binding CEA93_RS18025 PF00892 EamA-like transporter family CEA93_RS18035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEA93_RS18040 PF00005 ABC transporter CEA93_RS18040 PF17760 UvrA interaction domain CEA93_RS18040 PF17755 UvrA DNA-binding domain CEA93_RS18145 PF00717 Peptidase S24-like CEA93_RS18150 PF13438 Domain of unknown function (DUF4113) CEA93_RS18150 PF11799 impB/mucB/samB family C-terminal domain CEA93_RS18150 PF00817 impB/mucB/samB family CEA93_RS18150 PF11798 IMS family HHH motif CEA93_RS18225 PF13175 AAA ATPase domain CEA93_RS18230 PF13195 Protein of unknown function (DUF4011) CEA93_RS18230 PF13087 AAA domain CEA93_RS18230 PF13086 AAA domain CEA93_RS18230 PF13195 Protein of unknown function (DUF4011) CEA93_RS18230 PF13087 AAA domain CEA93_RS18230 PF13086 AAA domain CEA93_RS18255 PF13737 Transposase DDE domain CEA93_RS18280 PF00239 Resolvase, N terminal domain CEA93_RS18280 PF13408 Recombinase zinc beta ribbon domain CEA93_RS18280 PF07508 Recombinase CEA93_RS18290 PF00072 Response regulator receiver domain CEA93_RS18290 PF02954 Bacterial regulatory protein, Fis family CEA93_RS18290 PF00158 Sigma-54 interaction domain CEA93_RS18295 PF13188 PAS domain CEA93_RS18295 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS18295 PF00563 EAL domain CEA93_RS18295 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS18300 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS18305 PF00989 PAS fold CEA93_RS18305 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS18305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS18315 PF00072 Response regulator receiver domain CEA93_RS18330 PF01590 GAF domain CEA93_RS18330 PF00360 Phytochrome region CEA93_RS18330 PF00563 EAL domain CEA93_RS18330 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS18340 PF03459 TOBE domain CEA93_RS18340 PF00005 ABC transporter CEA93_RS18345 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS18355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEA93_RS18355 PF07685 CobB/CobQ-like glutamine amidotransferase domain CEA93_RS18360 PF04076 Bacterial OB fold (BOF) protein CEA93_RS18370 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS18380 PF06483 Chitinase C CEA93_RS18380 PF00704 Glycosyl hydrolases family 18 CEA93_RS18385 PF06719 AraC-type transcriptional regulator N-terminus CEA93_RS18385 PF12833 Helix-turn-helix domain CEA93_RS18390 PF00465 Iron-containing alcohol dehydrogenase CEA93_RS18395 PF00072 Response regulator receiver domain CEA93_RS18395 PF14532 Sigma-54 interaction domain CEA93_RS18395 PF02954 Bacterial regulatory protein, Fis family CEA93_RS18400 PF00672 HAMP domain CEA93_RS18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS18400 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS18415 PF07690 Major Facilitator Superfamily CEA93_RS18420 PF00224 Pyruvate kinase, barrel domain CEA93_RS18420 PF02887 Pyruvate kinase, alpha/beta domain CEA93_RS18425 PF00672 HAMP domain CEA93_RS18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS18425 PF00072 Response regulator receiver domain CEA93_RS18425 PF01627 Hpt domain CEA93_RS18425 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS18430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEA93_RS18435 PF02142 MGS-like domain CEA93_RS18440 PF12462 DNA helicase IV / RNA helicase N terminal CEA93_RS18440 PF13361 UvrD-like helicase C-terminal domain CEA93_RS18440 PF00580 UvrD/REP helicase N-terminal domain CEA93_RS18445 PF12805 FUSC-like inner membrane protein yccS CEA93_RS18465 PF01266 FAD dependent oxidoreductase CEA93_RS18465 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CEA93_RS18475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS18475 PF09308 LuxQ, periplasmic CEA93_RS18475 PF00072 Response regulator receiver domain CEA93_RS18475 PF00512 His Kinase A (phospho-acceptor) domain CEA93_RS18480 PF13407 Periplasmic binding protein domain CEA93_RS18490 PF01541 GIY-YIG catalytic domain CEA93_RS18495 PF04337 Protein of unknown function, DUF480 CEA93_RS18505 PF04363 Protein of unknown function (DUF496) CEA93_RS18515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEA93_RS18515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEA93_RS18520 PF00230 Major intrinsic protein CEA93_RS18525 PF01266 FAD dependent oxidoreductase CEA93_RS18525 PF04324 BFD-like [2Fe-2S] binding domain CEA93_RS18530 PF00890 FAD binding domain CEA93_RS18535 PF13183 4Fe-4S dicluster domain CEA93_RS18535 PF02754 Cysteine-rich domain CEA93_RS18540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEA93_RS18540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEA93_RS18545 PF00085 Thioredoxin CEA93_RS18550 PF13358 DDE superfamily endonuclease CEA93_RS18580 PF00580 UvrD/REP helicase N-terminal domain CEA93_RS18580 PF13361 UvrD-like helicase C-terminal domain CEA93_RS18590 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEA93_RS18600 PF11799 impB/mucB/samB family C-terminal domain CEA93_RS18600 PF00817 impB/mucB/samB family CEA93_RS18600 PF11798 IMS family HHH motif CEA93_RS18600 PF13438 Domain of unknown function (DUF4113) CEA93_RS18605 PF00717 Peptidase S24-like CEA93_RS18610 PF01381 Helix-turn-helix CEA93_RS18620 PF07804 HipA-like C-terminal domain CEA93_RS18620 PF13657 HipA N-terminal domain CEA93_RS18660 PF00085 Thioredoxin CEA93_RS18665 PF07690 Major Facilitator Superfamily CEA93_RS18670 PF11756 Nitrous oxide-stimulated promoter CEA93_RS18680 PF01513 ATP-NAD kinase CEA93_RS18685 PF10414 Sirohaem synthase dimerisation region CEA93_RS18685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEA93_RS18685 PF14824 Sirohaem biosynthesis protein central CEA93_RS18695 PF13806 Rieske-like [2Fe-2S] domain CEA93_RS18700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEA93_RS18700 PF18267 Rubredoxin NAD+ reductase C-terminal domain CEA93_RS18700 PF04324 BFD-like [2Fe-2S] binding domain CEA93_RS18700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEA93_RS18700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEA93_RS18710 PF13977 BetI-type transcriptional repressor, C-terminal CEA93_RS18710 PF00440 Bacterial regulatory proteins, tetR family CEA93_RS18715 PF00171 Aldehyde dehydrogenase family CEA93_RS18720 PF05199 GMC oxidoreductase CEA93_RS18720 PF00732 GMC oxidoreductase CEA93_RS18725 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEA93_RS18730 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS18735 PF00005 ABC transporter CEA93_RS18735 PF00571 CBS domain CEA93_RS18750 PF05762 VWA domain containing CoxE-like protein CEA93_RS18755 PF07728 AAA domain (dynein-related subfamily) CEA93_RS18755 PF12592 Protein of unknown function (DUF3763) CEA93_RS18755 PF17868 AAA lid domain CEA93_RS18765 PF01212 Beta-eliminating lyase CEA93_RS18775 PF00271 Helicase conserved C-terminal domain CEA93_RS18775 PF00270 DEAD/DEAH box helicase CEA93_RS18780 PF03222 Tryptophan/tyrosine permease family CEA93_RS18785 PF00672 HAMP domain CEA93_RS18785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS18790 PF16363 GDP-mannose 4,6 dehydratase CEA93_RS18795 PF03746 LamB/YcsF family CEA93_RS18805 PF02626 Carboxyltransferase domain, subdomain A and B CEA93_RS18820 PF00005 ABC transporter CEA93_RS18825 PF13472 GDSL-like Lipase/Acylhydrolase family CEA93_RS18830 PF12241 Trans-2-enoyl-CoA reductase catalytic region CEA93_RS18830 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CEA93_RS18830 PF07055 Enoyl reductase FAD binding domain CEA93_RS18835 PF00563 EAL domain CEA93_RS18835 PF00498 FHA domain CEA93_RS18835 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS18845 PF00226 DnaJ domain CEA93_RS18845 PF01556 DnaJ C terminal domain CEA93_RS18845 PF00684 DnaJ central domain CEA93_RS18860 PF13419 Haloacid dehalogenase-like hydrolase CEA93_RS18870 PF14319 Transposase zinc-binding domain CEA93_RS18870 PF04986 Putative transposase CEA93_RS18890 PF00294 pfkB family carbohydrate kinase CEA93_RS18895 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS18895 PF00563 EAL domain CEA93_RS18895 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS18895 PF13188 PAS domain CEA93_RS18900 PF00194 Eukaryotic-type carbonic anhydrase CEA93_RS18910 PF02743 Cache domain CEA93_RS18910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS18910 PF00672 HAMP domain CEA93_RS18915 PF00491 Arginase family CEA93_RS18920 PF17810 Arginine decarboxylase helical bundle domain CEA93_RS18920 PF17944 Arginine decarboxylase C-terminal helical extension CEA93_RS18920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEA93_RS18930 PF00005 ABC transporter CEA93_RS18930 PF00571 CBS domain CEA93_RS18935 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS18940 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEA93_RS18960 PF00696 Amino acid kinase family CEA93_RS18960 PF13840 ACT domain CEA93_RS18965 PF06339 Ectoine synthase CEA93_RS18970 PF00202 Aminotransferase class-III CEA93_RS18975 PF00583 Acetyltransferase (GNAT) family CEA93_RS18985 PF01467 Cytidylyltransferase-like CEA93_RS18990 PF02540 NAD synthase CEA93_RS19020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS19020 PF00672 HAMP domain CEA93_RS19020 PF02743 Cache domain CEA93_RS19025 PF00128 Alpha amylase, catalytic domain CEA93_RS19040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS19040 PF00672 HAMP domain CEA93_RS19040 PF02743 Cache domain CEA93_RS19045 PF17863 AAA lid domain CEA93_RS19045 PF07726 ATPase family associated with various cellular activities (AAA) CEA93_RS19050 PF01882 Protein of unknown function DUF58 CEA93_RS19065 PF13519 von Willebrand factor type A domain CEA93_RS19080 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS19085 PF04986 Putative transposase CEA93_RS19085 PF14319 Transposase zinc-binding domain CEA93_RS19100 PF01844 HNH endonuclease CEA93_RS19105 PF12843 Putative quorum-sensing-regulated virulence factor CEA93_RS19110 PF00884 Sulfatase CEA93_RS19120 PF01219 Prokaryotic diacylglycerol kinase CEA93_RS19125 PF08240 Alcohol dehydrogenase GroES-like domain CEA93_RS19125 PF00107 Zinc-binding dehydrogenase CEA93_RS19130 PF00155 Aminotransferase class I and II CEA93_RS19135 PF03466 LysR substrate binding domain CEA93_RS19135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS19140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEA93_RS19150 PF07690 Major Facilitator Superfamily CEA93_RS19155 PF00072 Response regulator receiver domain CEA93_RS19155 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS19160 PF05231 MASE1 CEA93_RS19160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS19160 PF07730 Histidine kinase CEA93_RS19165 PF07690 Major Facilitator Superfamily CEA93_RS19185 PF04013 Putative SAM-dependent RNA methyltransferase CEA93_RS19200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEA93_RS19200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEA93_RS19205 PF01022 Bacterial regulatory protein, arsR family CEA93_RS19210 PF01758 Sodium Bile acid symporter family CEA93_RS19220 PF00916 Sulfate permease family CEA93_RS19220 PF01740 STAS domain CEA93_RS19225 PF00582 Universal stress protein family CEA93_RS19230 PF17327 Acyl homoserine lactone synthase CEA93_RS19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS19235 PF00072 Response regulator receiver domain CEA93_RS19240 PF00478 IMP dehydrogenase / GMP reductase domain CEA93_RS19245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEA93_RS19245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEA93_RS19270 PF00313 'Cold-shock' DNA-binding domain CEA93_RS19275 PF07152 YaeQ protein CEA93_RS19285 PF01590 GAF domain CEA93_RS19285 PF00158 Sigma-54 interaction domain CEA93_RS19295 PF07687 Peptidase dimerisation domain CEA93_RS19295 PF01546 Peptidase family M20/M25/M40 CEA93_RS19300 PF07670 Nucleoside recognition CEA93_RS19300 PF07662 Na+ dependent nucleoside transporter C-terminus CEA93_RS19300 PF01773 Na+ dependent nucleoside transporter N-terminus CEA93_RS19305 PF03473 MOSC domain CEA93_RS19305 PF03476 MOSC N-terminal beta barrel domain CEA93_RS19305 PF00111 2Fe-2S iron-sulfur cluster binding domain CEA93_RS19310 PF01979 Amidohydrolase family CEA93_RS19315 PF05958 tRNA (Uracil-5-)-methyltransferase CEA93_RS19320 PF05661 Protein of unknown function (DUF808) CEA93_RS19355 PF18269 T3SS EscN ATPase C-terminal domain CEA93_RS19355 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEA93_RS19355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEA93_RS19360 PF00263 Bacterial type II and III secretion system protein CEA93_RS19360 PF03958 Bacterial type II/III secretion system short domain CEA93_RS19375 PF00813 FliP family CEA93_RS19395 PF13737 Transposase DDE domain CEA93_RS19400 PF13737 Transposase DDE domain CEA93_RS19405 PF00072 Response regulator receiver domain CEA93_RS19405 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS19425 PF08448 PAS fold CEA93_RS19425 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS19430 PF08220 DeoR-like helix-turn-helix domain CEA93_RS19430 PF00455 DeoR C terminal sensor domain CEA93_RS19435 PF03472 Autoinducer binding domain CEA93_RS19435 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS19440 PF00765 Autoinducer synthase CEA93_RS19455 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19460 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19460 PF14785 Maltose transport system permease protein MalF P2 domain CEA93_RS19465 PF01547 Bacterial extracellular solute-binding protein CEA93_RS19475 PF08402 TOBE domain CEA93_RS19475 PF00005 ABC transporter CEA93_RS19480 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS19490 PF01584 CheW-like domain CEA93_RS19490 PF00072 Response regulator receiver domain CEA93_RS19495 PF04237 YjbR CEA93_RS19500 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS19515 PF03707 Bacterial signalling protein N terminal repeat CEA93_RS19515 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS19515 PF00563 EAL domain CEA93_RS19530 PF03466 LysR substrate binding domain CEA93_RS19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS19535 PF00563 EAL domain CEA93_RS19535 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS19545 PF05726 Pirin C-terminal cupin domain CEA93_RS19545 PF02678 Pirin CEA93_RS19555 PF06865 Pyrimidine/purine nucleoside phosphorylase CEA93_RS19565 PF00793 DAHP synthetase I family CEA93_RS19570 PF00005 ABC transporter CEA93_RS19575 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19580 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEA93_RS19585 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEA93_RS19590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEA93_RS19590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEA93_RS19590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEA93_RS19610 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEA93_RS19620 PF00892 EamA-like transporter family CEA93_RS19625 PF00462 Glutaredoxin CEA93_RS19640 PF07690 Major Facilitator Superfamily CEA93_RS19645 PF03466 LysR substrate binding domain CEA93_RS19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS19650 PF08448 PAS fold CEA93_RS19650 PF08447 PAS fold CEA93_RS19650 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS19650 PF00563 EAL domain CEA93_RS19655 PF08525 Opacity-associated protein A N-terminal motif CEA93_RS19655 PF01551 Peptidase family M23 CEA93_RS19655 PF01476 LysM domain CEA93_RS19665 PF00916 Sulfate permease family CEA93_RS19665 PF01740 STAS domain CEA93_RS19670 PF07670 Nucleoside recognition CEA93_RS19680 PF07694 5TMR of 5TMR-LYT CEA93_RS19680 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS19685 PF00005 ABC transporter CEA93_RS19690 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19695 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19700 PF12849 PBP superfamily domain CEA93_RS19710 PF00155 Aminotransferase class I and II CEA93_RS19710 PF00392 Bacterial regulatory proteins, gntR family CEA93_RS19715 PF13302 Acetyltransferase (GNAT) domain CEA93_RS19730 PF07504 Fungalysin/Thermolysin Propeptide Motif CEA93_RS19730 PF02868 Thermolysin metallopeptidase, alpha-helical domain CEA93_RS19730 PF04151 Bacterial pre-peptidase C-terminal domain CEA93_RS19730 PF03413 Peptidase propeptide and YPEB domain CEA93_RS19730 PF01447 Thermolysin metallopeptidase, catalytic domain CEA93_RS19735 PF03922 OmpW family CEA93_RS19745 PF18416 N-acetylglucosamine binding protein domain 2 CEA93_RS19745 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CEA93_RS19750 PF07690 Major Facilitator Superfamily CEA93_RS19755 PF03009 Glycerophosphoryl diester phosphodiesterase family CEA93_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS19760 PF03466 LysR substrate binding domain CEA93_RS19765 PF03306 Alpha-acetolactate decarboxylase CEA93_RS19770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEA93_RS19770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEA93_RS19770 PF00205 Thiamine pyrophosphate enzyme, central domain CEA93_RS19790 PF03466 LysR substrate binding domain CEA93_RS19790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS19795 PF02652 L-lactate permease CEA93_RS19800 PF01070 FMN-dependent dehydrogenase CEA93_RS19815 PF01161 Phosphatidylethanolamine-binding protein CEA93_RS19820 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CEA93_RS19830 PF03372 Endonuclease/Exonuclease/phosphatase family CEA93_RS19845 PF00672 HAMP domain CEA93_RS19845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS19850 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS19855 PF14310 Fibronectin type III-like domain CEA93_RS19855 PF01915 Glycosyl hydrolase family 3 C-terminal domain CEA93_RS19855 PF00933 Glycosyl hydrolase family 3 N terminal domain CEA93_RS19860 PF17912 MalK OB fold domain CEA93_RS19860 PF00005 ABC transporter CEA93_RS19865 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19870 PF00528 Binding-protein-dependent transport system inner membrane component CEA93_RS19880 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS19885 PF02264 LamB porin CEA93_RS19890 PF01554 MatE CEA93_RS19905 PF07690 Major Facilitator Superfamily CEA93_RS19910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS19910 PF00672 HAMP domain CEA93_RS19915 PF13654 AAA domain CEA93_RS19915 PF05362 Lon protease (S16) C-terminal proteolytic domain CEA93_RS19925 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CEA93_RS19925 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CEA93_RS19930 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEA93_RS19935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CEA93_RS19935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEA93_RS19940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEA93_RS19940 PF03466 LysR substrate binding domain CEA93_RS19955 PF04986 Putative transposase CEA93_RS19955 PF14319 Transposase zinc-binding domain CEA93_RS19965 PF00356 Bacterial regulatory proteins, lacI family CEA93_RS19970 PF00294 pfkB family carbohydrate kinase CEA93_RS19975 PF13407 Periplasmic binding protein domain CEA93_RS19980 PF02653 Branched-chain amino acid transport system / permease component CEA93_RS19985 PF00005 ABC transporter CEA93_RS19990 PF05025 RbsD / FucU transport protein family CEA93_RS20005 PF01471 Putative peptidoglycan binding domain CEA93_RS20005 PF04717 Type VI secretion system, phage-baseplate injector CEA93_RS20010 PF05638 Type VI secretion system effector, Hcp CEA93_RS20015 PF00128 Alpha amylase, catalytic domain CEA93_RS20015 PF02806 Alpha amylase, C-terminal all-beta domain CEA93_RS20015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEA93_RS20020 PF02446 4-alpha-glucanotransferase CEA93_RS20025 PF00343 Carbohydrate phosphorylase CEA93_RS20030 PF17874 MalT-like TPR region CEA93_RS20030 PF00196 Bacterial regulatory proteins, luxR family CEA93_RS20035 PF10928 Protein of unknown function (DUF2810) CEA93_RS20040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS20040 PF17200 Single Cache domain 2 CEA93_RS20040 PF00672 HAMP domain CEA93_RS20055 PF14319 Transposase zinc-binding domain CEA93_RS20055 PF04986 Putative transposase CEA93_RS20060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS20060 PF02743 Cache domain CEA93_RS20060 PF00672 HAMP domain CEA93_RS20065 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEA93_RS20075 PF00171 Aldehyde dehydrogenase family CEA93_RS20080 PF01037 Lrp/AsnC ligand binding domain CEA93_RS20085 PF00672 HAMP domain CEA93_RS20085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS20085 PF02743 Cache domain CEA93_RS20095 PF00474 Sodium:solute symporter family CEA93_RS20105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CEA93_RS20105 PF00171 Aldehyde dehydrogenase family CEA93_RS20105 PF01619 Proline dehydrogenase CEA93_RS20105 PF14850 DNA-binding domain of Proline dehydrogenase CEA93_RS20110 PF12833 Helix-turn-helix domain CEA93_RS20120 PF03781 Sulfatase-modifying factor enzyme 1 CEA93_RS20130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CEA93_RS20130 PF01243 Pyridoxamine 5'-phosphate oxidase CEA93_RS20135 PF00529 HlyD membrane-fusion protein of T1SS CEA93_RS20150 PF03412 Peptidase C39 family CEA93_RS20150 PF00005 ABC transporter CEA93_RS20150 PF00664 ABC transporter transmembrane region CEA93_RS20160 PF00072 Response regulator receiver domain CEA93_RS20160 PF00990 Diguanylate cyclase, GGDEF domain CEA93_RS20170 PF02743 Cache domain CEA93_RS20170 PF00672 HAMP domain CEA93_RS20170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS20175 PF01339 CheB methylesterase CEA93_RS20175 PF00072 Response regulator receiver domain CEA93_RS20180 PF03975 CheD chemotactic sensory transduction CEA93_RS20185 PF03705 CheR methyltransferase, all-alpha domain CEA93_RS20185 PF01739 CheR methyltransferase, SAM binding domain CEA93_RS20190 PF00672 HAMP domain CEA93_RS20190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEA93_RS20190 PF02203 Tar ligand binding domain homologue CEA93_RS20195 PF01584 CheW-like domain CEA93_RS20200 PF01584 CheW-like domain CEA93_RS20205 PF01627 Hpt domain CEA93_RS20205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEA93_RS20205 PF09078 CheY binding CEA93_RS20205 PF02895 Signal transducing histidine kinase, homodimeric domain CEA93_RS20205 PF01584 CheW-like domain CEA93_RS20210 PF00486 Transcriptional regulatory protein, C terminal CEA93_RS20210 PF00072 Response regulator receiver domain CEA93_RS20220 PF13718 GNAT acetyltransferase 2 CEA93_RS20220 PF05127 Helicase CEA93_RS20225 PF13416 Bacterial extracellular solute-binding protein CEA93_RS20230 PF14319 Transposase zinc-binding domain CEA93_RS20230 PF04986 Putative transposase CEA93_RS20240 PF08775 ParB family CEA93_RS20240 PF02195 ParB-like nuclease domain CEA93_RS20245 PF18607 ParA helix turn helix domain CEA93_RS20245 PF13614 AAA domain