CLI14_RS00005	SM01228	CLI14_RS00005
CLI14_RS00020	SM00470	ParB-like nuclease domain
CLI14_RS00060	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS00180	SM00876	Biotin and Thiamin Synthesis associated domain
CLI14_RS00210	SM00344	helix_turn_helix ASNC type
CLI14_RS00265	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS00280	SM01007	Class II Aldolase and Adducin N-terminal domain
CLI14_RS00295	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS00350	SM01004	Delta-aminolevulinic acid dehydratase
CLI14_RS00355	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CLI14_RS00355	SM00474	3'-5' exonuclease
CLI14_RS00355	SM00475	5'-3' exonuclease
CLI14_RS00355	SM00482	DNA polymerase A domain
CLI14_RS00385	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS00455	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS00485	SM00448	cheY-homologous receiver domain
CLI14_RS00500	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS00510	SM00487	DEAD-like helicases superfamily
CLI14_RS00645	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS00655	SM00341	Helicase and RNase D C-terminal
CLI14_RS00655	SM00487	DEAD-like helicases superfamily
CLI14_RS00655	SM00490	helicase superfamily c-terminal domain
CLI14_RS00655	SM00956	CLI14_RS00655
CLI14_RS00685	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS00695	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS00725	SM00636	CLI14_RS00725
CLI14_RS00765	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS00795	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS00865	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CLI14_RS00865	SM01232	CLI14_RS00865
CLI14_RS00975	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS01125	SM00226	Low molecular weight phosphatase family
CLI14_RS01175	SM00984	UDP binding domain
CLI14_RS01185	SM00849	Metallo-beta-lactamase superfamily
CLI14_RS01185	SM01027	Beta-Casp domain
CLI14_RS01190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS01190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS01220	SM00411	bacterial (prokaryotic) histone like domain
CLI14_RS01230	SM01209	CLI14_RS01230
CLI14_RS01230	SM01210	CLI14_RS01230
CLI14_RS01235	SM00798	AICARFT/IMPCHase bienzyme
CLI14_RS01235	SM00851	MGS-like domain
CLI14_RS01240	SM00422	helix_turn_helix, mercury resistance
CLI14_RS01265	SM00878	Biotin carboxylase C-terminal domain
CLI14_RS01285	SM00479	CLI14_RS01285
CLI14_RS01300	SM00387	Histidine kinase-like ATPases
CLI14_RS01300	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS01300	SM00448	cheY-homologous receiver domain
CLI14_RS01315	SM01091	Transporter associated domain
CLI14_RS01320	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS01320	SM00448	cheY-homologous receiver domain
CLI14_RS01385	SM00357	Cold shock protein domain
CLI14_RS01395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS01395	SM00387	Histidine kinase-like ATPases
CLI14_RS01395	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS01400	SM00448	cheY-homologous receiver domain
CLI14_RS01400	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS01450	SM00919	Malic enzyme, NAD binding domain
CLI14_RS01450	SM01274	CLI14_RS01450
CLI14_RS01460	SM00487	DEAD-like helicases superfamily
CLI14_RS01460	SM00490	helicase superfamily c-terminal domain
CLI14_RS01465	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS01480	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS01480	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI14_RS01525	SM00883	Chaperonin 10 Kd subunit
CLI14_RS01550	SM00841	Elongation factor P, C-terminal
CLI14_RS01550	SM01185	CLI14_RS01550
CLI14_RS01580	SM00450	Rhodanese Homology Domain
CLI14_RS01595	SM00971	Serine acetyltransferase, N-terminal
CLI14_RS01615	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CLI14_RS01680	SM00965	Secretin and TonB N terminus short domain
CLI14_RS01770	SM01150	CLI14_RS01770
CLI14_RS01775	SM00100	Cyclic nucleotide-monophosphate binding domain
CLI14_RS01775	SM00419	helix_turn_helix, cAMP Regulatory protein
CLI14_RS01800	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS01830	SM00788	Adenylosuccinate synthetase
CLI14_RS01840	SM00671	Sel1-like repeats.
CLI14_RS01845	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS01845	SM00357	Cold shock protein domain
CLI14_RS01845	SM00955	CLI14_RS01845
CLI14_RS01850	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CLI14_RS01855	SM01403	CLI14_RS01855
CLI14_RS01875	SM01382	CLI14_RS01875
CLI14_RS01875	SM01383	CLI14_RS01875
CLI14_RS01890	SM00322	K homology RNA-binding domain
CLI14_RS01910	SM01374	CLI14_RS01910
CLI14_RS01915	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CLI14_RS01980	SM00363	S4 RNA-binding domain
CLI14_RS01980	SM01390	CLI14_RS01980
CLI14_RS01985	SM00662	RNA polymerases D
CLI14_RS02010	SM00487	DEAD-like helicases superfamily
CLI14_RS02010	SM00490	helicase superfamily c-terminal domain
CLI14_RS02015	SM00563	Phosphate acyltransferases
CLI14_RS02090	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS02165	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS02180	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS02180	SM00924	MgtE intracellular N domain
CLI14_RS02210	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS02230	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS02240	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS02275	SM00563	Phosphate acyltransferases
CLI14_RS02280	SM00387	Histidine kinase-like ATPases
CLI14_RS02285	SM00989	CLI14_RS02285
CLI14_RS02310	SM00670	Large family of predicted nucleotide-binding domains
CLI14_RS02320	SM00487	DEAD-like helicases superfamily
CLI14_RS02320	SM00490	helicase superfamily c-terminal domain
CLI14_RS02400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS02455	SM01329	CLI14_RS02455
CLI14_RS02460	SM00917	LeuA allosteric (dimerisation) domain
CLI14_RS02465	SM00014	Acid phosphatase homologues
CLI14_RS02595	SM00358	Double-stranded RNA binding motif
CLI14_RS02595	SM00535	Ribonuclease III family
CLI14_RS02620	SM00073	Histidine Phosphotransfer domain
CLI14_RS02620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS02620	SM00387	Histidine kinase-like ATPases
CLI14_RS02620	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS02620	SM00448	cheY-homologous receiver domain
CLI14_RS02630	SM00954	Region found in RelA / SpoT proteins
CLI14_RS02645	SM01192	CLI14_RS02645
CLI14_RS02645	SM01193	CLI14_RS02645
CLI14_RS02655	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS02665	SM00287	Bacterial SH3 domain homologues
CLI14_RS02680	SM00880	CLI14_RS02680
CLI14_RS02680	SM01118	CLI14_RS02680
CLI14_RS02690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS02730	SM00387	Histidine kinase-like ATPases
CLI14_RS02730	SM00433	TopoisomeraseII
CLI14_RS02735	SM00434	DNA Topoisomerase IV
CLI14_RS02740	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI14_RS02745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI14_RS02800	SM00749	bacterial OsmY and nodulation domain
CLI14_RS02885	SM00842	Cell division protein FtsA
CLI14_RS02890	SM00864	Tubulin/FtsZ family, GTPase domain
CLI14_RS02890	SM00865	Tubulin/FtsZ family, C-terminal domain
CLI14_RS02905	SM00957	SecA DEAD-like domain
CLI14_RS02905	SM00958	SecA preprotein cross-linking domain
CLI14_RS02920	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CLI14_RS02925	SM00851	MGS-like domain
CLI14_RS02925	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLI14_RS02990	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS02995	SM00073	Histidine Phosphotransfer domain
CLI14_RS02995	SM00091	PAS domain
CLI14_RS02995	SM00387	Histidine kinase-like ATPases
CLI14_RS02995	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS02995	SM00448	cheY-homologous receiver domain
CLI14_RS03005	SM00448	cheY-homologous receiver domain
CLI14_RS03005	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS03040	SM00518	AP endonuclease family 2
CLI14_RS03045	SM00986	Uracil DNA glycosylase superfamily
CLI14_RS03045	SM00987	UreE urease accessory protein, C-terminal domain 
CLI14_RS03080	SM01133	CLI14_RS03080
CLI14_RS03085	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CLI14_RS03115	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS03120	SM00838	Elongation factor G C-terminus
CLI14_RS03120	SM00889	Elongation factor G, domain IV
CLI14_RS03165	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS03245	SM00925	MltA specific insert domain
CLI14_RS03280	SM00464	Found in ATP-dependent protease La (LON)
CLI14_RS03330	SM00900	CLI14_RS03330
CLI14_RS03420	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI14_RS03475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS03520	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI14_RS03530	SM00935	Outer membrane protein (OmpH-like)
CLI14_RS03560	SM00481	DNA polymerase alpha chain like domain
CLI14_RS03570	SM00977	TilS substrate C-terminal domain
CLI14_RS03580	SM00938	Nitrogen regulatory protein P-II
CLI14_RS03595	SM00257	Lysin motif
CLI14_RS03600	SM00849	Metallo-beta-lactamase superfamily
CLI14_RS03615	SM00479	CLI14_RS03615
CLI14_RS03655	SM00363	S4 RNA-binding domain
CLI14_RS03670	SM01081	Putative carbohydrate binding domain
CLI14_RS03730	SM00858	CLI14_RS03730
CLI14_RS03735	SM00260	Two component signalling adaptor domain
CLI14_RS03735	SM00448	cheY-homologous receiver domain
CLI14_RS03740	SM00138	Methyltransferase, chemotaxis proteins 
CLI14_RS03785	SM00047	Lysozyme subfamily 2
CLI14_RS03895	SM01400	CLI14_RS03895
CLI14_RS03915	SM00937	CLI14_RS03915
CLI14_RS03990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS03990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS04005	SM01130	CLI14_RS04005
CLI14_RS04100	SM00091	PAS domain
CLI14_RS04100	SM00387	Histidine kinase-like ATPases
CLI14_RS04100	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS04105	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS04105	SM00448	cheY-homologous receiver domain
CLI14_RS04130	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS04185	SM00463	Small MutS-related domain
CLI14_RS04225	SM00825	Beta-ketoacyl synthase
CLI14_RS04235	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CLI14_RS04325	SM00861	Transketolase, pyrimidine binding domain
CLI14_RS04340	SM00881	CoA binding domain
CLI14_RS04350	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS04360	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS04365	SM00899	CLI14_RS04365
CLI14_RS04385	SM00836	DALR anticodon binding domain
CLI14_RS04385	SM01016	Arginyl tRNA synthetase N terminal dom
CLI14_RS04400	SM00855	Phosphoglycerate mutase family
CLI14_RS04410	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS04410	SM00962	SRP54-type protein, GTPase domain
CLI14_RS04425	SM00448	cheY-homologous receiver domain
CLI14_RS04435	SM00073	Histidine Phosphotransfer domain
CLI14_RS04435	SM00260	Two component signalling adaptor domain
CLI14_RS04435	SM00387	Histidine kinase-like ATPases
CLI14_RS04435	SM01231	CLI14_RS04435
CLI14_RS04440	SM00448	cheY-homologous receiver domain
CLI14_RS04450	SM00260	Two component signalling adaptor domain
CLI14_RS04455	SM00260	Two component signalling adaptor domain
CLI14_RS04465	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS04535	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CLI14_RS04535	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CLI14_RS04535	SM00493	CLI14_RS04535
CLI14_RS04590	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CLI14_RS04610	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS04615	SM00363	S4 RNA-binding domain
CLI14_RS04645	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CLI14_RS04650	SM00822	CLI14_RS04650
CLI14_RS04660	SM00825	Beta-ketoacyl synthase
CLI14_RS04730	SM00260	Two component signalling adaptor domain
CLI14_RS04730	SM00448	cheY-homologous receiver domain
CLI14_RS04750	SM01144	CLI14_RS04750
CLI14_RS04755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS04760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS04795	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CLI14_RS04820	SM00563	Phosphate acyltransferases
CLI14_RS04830	SM00978	CLI14_RS04830
CLI14_RS04840	SM00344	helix_turn_helix ASNC type
CLI14_RS04865	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS04865	SM00267	diguanylate cyclase
CLI14_RS04895	SM01236	CLI14_RS04895
CLI14_RS04910	SM00448	cheY-homologous receiver domain
CLI14_RS04910	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS04915	SM00387	Histidine kinase-like ATPases
CLI14_RS04915	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS04925	SM00344	helix_turn_helix ASNC type
CLI14_RS04940	SM00448	cheY-homologous receiver domain
CLI14_RS04940	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS04945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS04945	SM00387	Histidine kinase-like ATPases
CLI14_RS04945	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS04960	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS05000	SM00825	Beta-ketoacyl synthase
CLI14_RS05005	SM00822	CLI14_RS05005
CLI14_RS05015	SM00825	Beta-ketoacyl synthase
CLI14_RS05075	SM00563	Phosphate acyltransferases
CLI14_RS05095	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS05095	SM00387	Histidine kinase-like ATPases
CLI14_RS05095	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS05095	SM00448	cheY-homologous receiver domain
CLI14_RS05100	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS05100	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS05100	SM00448	cheY-homologous receiver domain
CLI14_RS05120	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05125	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05160	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05180	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05195	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS05195	SM00876	Biotin and Thiamin Synthesis associated domain
CLI14_RS05225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS05235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS05235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS05285	SM00487	DEAD-like helicases superfamily
CLI14_RS05285	SM00490	helicase superfamily c-terminal domain
CLI14_RS05285	SM00982	CLI14_RS05285
CLI14_RS05285	SM01058	CarD-like/TRCF domain
CLI14_RS05300	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05315	SM00849	Metallo-beta-lactamase superfamily
CLI14_RS05320	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05355	SM00763	PrkA AAA domain
CLI14_RS05375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS05375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS05400	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05405	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS05405	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CLI14_RS05425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS05425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS05445	SM00491	CLI14_RS05445
CLI14_RS05460	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS05475	SM00840	CLI14_RS05475
CLI14_RS05485	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI14_RS05490	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05545	SM00028	Tetratricopeptide repeats
CLI14_RS05575	SM00387	Histidine kinase-like ATPases
CLI14_RS05575	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS05575	SM00448	cheY-homologous receiver domain
CLI14_RS05615	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS05625	SM00267	diguanylate cyclase
CLI14_RS05670	SM00671	Sel1-like repeats.
CLI14_RS05720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS05720	SM00866	CLI14_RS05720
CLI14_RS05725	SM01022	CLI14_RS05725
CLI14_RS05735	SM00841	Elongation factor P, C-terminal
CLI14_RS05735	SM01185	CLI14_RS05735
CLI14_RS05745	SM00486	DNA polymerase type-B family
CLI14_RS05750	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS05750	SM00448	cheY-homologous receiver domain
CLI14_RS05755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI14_RS05755	SM00465	GIY-YIG type nucleases (URI domain)
CLI14_RS05800	SM00873	B3/4 domain
CLI14_RS05800	SM00874	tRNA synthetase B5 domain
CLI14_RS05800	SM00896	Ferredoxin-fold anticodon binding domain
CLI14_RS05805	SM00411	bacterial (prokaryotic) histone like domain
CLI14_RS05820	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI14_RS05820	SM00091	PAS domain
CLI14_RS05820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS05830	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS05830	SM00267	diguanylate cyclase
CLI14_RS05850	SM00479	CLI14_RS05850
CLI14_RS05865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS05865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS05870	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05880	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05915	SM00855	Phosphoglycerate mutase family
CLI14_RS05930	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS05975	SM00028	Tetratricopeptide repeats
CLI14_RS06015	SM00387	Histidine kinase-like ATPases
CLI14_RS06020	SM00448	cheY-homologous receiver domain
CLI14_RS06025	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS06030	SM00260	Two component signalling adaptor domain
CLI14_RS06030	SM00448	cheY-homologous receiver domain
CLI14_RS06035	SM00642	Alpha-amylase domain
CLI14_RS06045	SM00267	diguanylate cyclase
CLI14_RS06060	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS06140	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS06140	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI14_RS06165	SM00240	Forkhead associated domain
CLI14_RS06190	SM00220	Serine/Threonine protein kinases, catalytic domain
CLI14_RS06220	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS06230	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS06315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS06315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS06330	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS06345	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS06350	SM00640	Glycosyl hydrolases family 32
CLI14_RS06355	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS06355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS06360	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS06365	SM00450	Rhodanese Homology Domain
CLI14_RS06370	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS06455	SM00849	Metallo-beta-lactamase superfamily
CLI14_RS06470	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI14_RS06480	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS06480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS06485	SM00479	CLI14_RS06485
CLI14_RS06490	SM00100	Cyclic nucleotide-monophosphate binding domain
CLI14_RS06490	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS06500	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS06505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS06510	SM00448	cheY-homologous receiver domain
CLI14_RS06520	SM00073	Histidine Phosphotransfer domain
CLI14_RS06520	SM00260	Two component signalling adaptor domain
CLI14_RS06520	SM00387	Histidine kinase-like ATPases
CLI14_RS06520	SM01231	CLI14_RS06520
CLI14_RS06525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS06525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS06530	SM00260	Two component signalling adaptor domain
CLI14_RS06535	SM00138	Methyltransferase, chemotaxis proteins 
CLI14_RS06545	SM00448	cheY-homologous receiver domain
CLI14_RS06560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS06560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS06620	SM00091	PAS domain
CLI14_RS06620	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS06635	SM00267	diguanylate cyclase
CLI14_RS06645	SM01005	Alanine racemase, C-terminal domain
CLI14_RS06650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS06650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS06660	SM00387	Histidine kinase-like ATPases
CLI14_RS06665	SM00448	cheY-homologous receiver domain
CLI14_RS06675	SM00357	Cold shock protein domain
CLI14_RS06690	SM00487	DEAD-like helicases superfamily
CLI14_RS06690	SM00490	helicase superfamily c-terminal domain
CLI14_RS06700	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS06750	SM00267	diguanylate cyclase
CLI14_RS06750	SM01079	CLI14_RS06750
CLI14_RS06755	SM00479	CLI14_RS06755
CLI14_RS06770	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS06770	SM00487	DEAD-like helicases superfamily
CLI14_RS06770	SM00490	helicase superfamily c-terminal domain
CLI14_RS06770	SM00847	Helicase associated domain (HA2)  Add an annotation
CLI14_RS06815	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS06820	SM00479	CLI14_RS06820
CLI14_RS06875	SM00857	Resolvase, N terminal domain
CLI14_RS06910	SM00487	DEAD-like helicases superfamily
CLI14_RS06910	SM00490	helicase superfamily c-terminal domain
CLI14_RS07005	SM00849	Metallo-beta-lactamase superfamily
CLI14_RS07075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS07085	SM01144	CLI14_RS07085
CLI14_RS07110	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07130	SM00387	Histidine kinase-like ATPases
CLI14_RS07135	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS07135	SM00448	cheY-homologous receiver domain
CLI14_RS07140	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07175	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07205	SM00100	Cyclic nucleotide-monophosphate binding domain
CLI14_RS07205	SM00419	helix_turn_helix, cAMP Regulatory protein
CLI14_RS07300	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07310	SM00981	CLI14_RS07310
CLI14_RS07345	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CLI14_RS07345	SM00245	tail specific protease
CLI14_RS07350	SM00945	ProQ/FINO family
CLI14_RS07360	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07380	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS07420	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS07435	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07455	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CLI14_RS07540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS07540	SM00895	CLI14_RS07540
CLI14_RS07565	SM00448	cheY-homologous receiver domain
CLI14_RS07565	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS07570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS07570	SM00387	Histidine kinase-like ATPases
CLI14_RS07570	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS07595	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07635	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS07690	SM00448	cheY-homologous receiver domain
CLI14_RS07695	SM00387	Histidine kinase-like ATPases
CLI14_RS07720	SM00764	Citrate lyase ligase C-terminal domain
CLI14_RS07740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS07755	SM00434	DNA Topoisomerase IV
CLI14_RS07785	SM00852	Probable molybdopterin binding domain
CLI14_RS07800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS07800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS07800	SM01049	CLI14_RS07800
CLI14_RS07840	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07865	SM00363	S4 RNA-binding domain
CLI14_RS07870	SM00487	DEAD-like helicases superfamily
CLI14_RS07870	SM00490	helicase superfamily c-terminal domain
CLI14_RS07880	SM00448	cheY-homologous receiver domain
CLI14_RS07880	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS07885	SM00387	Histidine kinase-like ATPases
CLI14_RS07905	SM00487	DEAD-like helicases superfamily
CLI14_RS07905	SM00490	helicase superfamily c-terminal domain
CLI14_RS07955	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS07995	SM00155	Phospholipase D. Active site motifs.
CLI14_RS08025	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08045	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08050	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08065	SM01131	CLI14_RS08065
CLI14_RS08190	SM00448	cheY-homologous receiver domain
CLI14_RS08190	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS08200	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS08235	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CLI14_RS08235	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CLI14_RS08235	SM00493	CLI14_RS08235
CLI14_RS08260	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS08265	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08265	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI14_RS08275	SM00357	Cold shock protein domain
CLI14_RS08335	SM00528	Domain in histone-like proteins of HNS family
CLI14_RS08375	SM00387	Histidine kinase-like ATPases
CLI14_RS08380	SM00448	cheY-homologous receiver domain
CLI14_RS08445	SM00919	Malic enzyme, NAD binding domain
CLI14_RS08445	SM01274	CLI14_RS08445
CLI14_RS08470	SM00267	diguanylate cyclase
CLI14_RS08480	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08485	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08510	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS08510	SM00267	diguanylate cyclase
CLI14_RS08515	SM00363	S4 RNA-binding domain
CLI14_RS08525	SM00481	DNA polymerase alpha chain like domain
CLI14_RS08620	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS08620	SM00091	PAS domain
CLI14_RS08625	SM00020	Trypsin-like serine protease
CLI14_RS08630	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS08685	SM00843	CLI14_RS08685
CLI14_RS08690	SM00344	helix_turn_helix ASNC type
CLI14_RS08695	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CLI14_RS08695	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CLI14_RS08715	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI14_RS08720	SM00028	Tetratricopeptide repeats
CLI14_RS08730	SM00411	bacterial (prokaryotic) histone like domain
CLI14_RS08735	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS08755	SM00411	bacterial (prokaryotic) histone like domain
CLI14_RS08760	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08760	SM00464	Found in ATP-dependent protease La (LON)
CLI14_RS08765	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08765	SM00994	ClpX C4-type zinc finger
CLI14_RS08765	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI14_RS08785	SM00387	Histidine kinase-like ATPases
CLI14_RS08785	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS08790	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS08790	SM00448	cheY-homologous receiver domain
CLI14_RS08820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS08820	SM00387	Histidine kinase-like ATPases
CLI14_RS08825	SM00448	cheY-homologous receiver domain
CLI14_RS08825	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS08845	SM00487	DEAD-like helicases superfamily
CLI14_RS08845	SM00490	helicase superfamily c-terminal domain
CLI14_RS08850	SM00642	Alpha-amylase domain
CLI14_RS08890	SM00495	Chitin-binding domain type 3
CLI14_RS08890	SM00636	CLI14_RS08890
CLI14_RS08930	SM00474	3'-5' exonuclease
CLI14_RS08960	SM00487	DEAD-like helicases superfamily
CLI14_RS08960	SM00491	CLI14_RS08960
CLI14_RS08985	SM00870	CLI14_RS08985
CLI14_RS09005	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI14_RS09040	SM00493	CLI14_RS09040
CLI14_RS09050	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS09070	SM00448	cheY-homologous receiver domain
CLI14_RS09165	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS09170	SM00267	diguanylate cyclase
CLI14_RS09190	SM00852	Probable molybdopterin binding domain
CLI14_RS09195	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS09210	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS09210	SM00448	cheY-homologous receiver domain
CLI14_RS09215	SM00487	DEAD-like helicases superfamily
CLI14_RS09215	SM00490	helicase superfamily c-terminal domain
CLI14_RS09260	SM00823	Phosphopantetheine attachment site
CLI14_RS09260	SM00824	Thioesterase
CLI14_RS09275	SM00923	MbtH-like protein
CLI14_RS09315	SM00900	CLI14_RS09315
CLI14_RS09325	SM00478	endonuclease III
CLI14_RS09325	SM00525	CLI14_RS09325
CLI14_RS09340	SM00479	CLI14_RS09340
CLI14_RS09415	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CLI14_RS09435	SM00387	Histidine kinase-like ATPases
CLI14_RS09440	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS09470	SM00244	prohibitin homologues
CLI14_RS09480	SM00422	helix_turn_helix, mercury resistance
CLI14_RS09500	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CLI14_RS09500	SM00292	breast cancer carboxy-terminal domain
CLI14_RS09500	SM00532	Ligase N family
CLI14_RS09505	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CLI14_RS09540	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS09555	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS09555	SM01091	Transporter associated domain
CLI14_RS09610	SM00936	Penicillin-binding protein 5, C-terminal domain 
CLI14_RS09625	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS09735	SM00984	UDP binding domain
CLI14_RS09740	SM00984	UDP binding domain
CLI14_RS09750	SM00226	Low molecular weight phosphatase family
CLI14_RS09795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS09795	SM00387	Histidine kinase-like ATPases
CLI14_RS09795	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS09800	SM00448	cheY-homologous receiver domain
CLI14_RS09800	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS09805	SM00642	Alpha-amylase domain
CLI14_RS09815	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS09830	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS09830	SM00930	CLI14_RS09830
CLI14_RS09860	SM00028	Tetratricopeptide repeats
CLI14_RS09865	SM00267	diguanylate cyclase
CLI14_RS09875	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CLI14_RS09875	SM00475	5'-3' exonuclease
CLI14_RS09895	SM00981	CLI14_RS09895
CLI14_RS09920	SM00861	Transketolase, pyrimidine binding domain
CLI14_RS10000	SM01211	CLI14_RS10000
CLI14_RS10010	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS10025	SM00829	Enoylreductase
CLI14_RS10065	SM00271	DnaJ molecular chaperone homology domain
CLI14_RS10140	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS10150	SM00487	DEAD-like helicases superfamily
CLI14_RS10215	SM00257	Lysin motif
CLI14_RS10275	SM00487	DEAD-like helicases superfamily
CLI14_RS10310	SM00495	Chitin-binding domain type 3
CLI14_RS10325	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS10325	SM01240	CLI14_RS10325
CLI14_RS10340	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS10345	SM00564	beta-propeller repeat
CLI14_RS10375	SM00562	CLI14_RS10375
CLI14_RS10400	SM00271	DnaJ molecular chaperone homology domain
CLI14_RS10445	SM01323	CLI14_RS10445
CLI14_RS10460	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS10495	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS10525	SM00091	PAS domain
CLI14_RS10525	SM00387	Histidine kinase-like ATPases
CLI14_RS10525	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS10530	SM00448	cheY-homologous receiver domain
CLI14_RS10530	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS10590	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS10590	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI14_RS10615	SM00830	Chorismate mutase type II
CLI14_RS10625	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS10625	SM00267	diguanylate cyclase
CLI14_RS10645	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS10655	SM00830	Chorismate mutase type II
CLI14_RS10670	SM00448	cheY-homologous receiver domain
CLI14_RS10670	SM00850	LytTr DNA-binding domain
CLI14_RS10725	SM00904	Riboflavin kinase
CLI14_RS10740	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI14_RS10840	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS10920	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CLI14_RS10930	SM00927	DNA mismatch repair enzyme MutH
CLI14_RS10945	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS10970	SM00487	DEAD-like helicases superfamily
CLI14_RS10970	SM00490	helicase superfamily c-terminal domain
CLI14_RS10980	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS10980	SM00267	diguanylate cyclase
CLI14_RS11005	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS11005	SM00091	PAS domain
CLI14_RS11005	SM00267	diguanylate cyclase
CLI14_RS11025	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI14_RS11030	SM00028	Tetratricopeptide repeats
CLI14_RS11035	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS11035	SM00322	K homology RNA-binding domain
CLI14_RS11040	SM01387	CLI14_RS11040
CLI14_RS11060	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS11060	SM00322	K homology RNA-binding domain
CLI14_RS11095	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11105	SM01103	CLI14_RS11105
CLI14_RS11175	SM00091	PAS domain
CLI14_RS11175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS11175	SM00387	Histidine kinase-like ATPases
CLI14_RS11175	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS11175	SM00448	cheY-homologous receiver domain
CLI14_RS11195	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11200	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11220	SM01068	Putative carbohydrate binding domain
CLI14_RS11230	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11250	SM00938	Nitrogen regulatory protein P-II
CLI14_RS11290	SM00487	DEAD-like helicases superfamily
CLI14_RS11290	SM00490	helicase superfamily c-terminal domain
CLI14_RS11290	SM00847	Helicase associated domain (HA2)  Add an annotation
CLI14_RS11340	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11350	SM00947	Carbonic anhydrase
CLI14_RS11380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS11380	SM00895	CLI14_RS11380
CLI14_RS11405	SM00644	CLI14_RS11405
CLI14_RS11470	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11470	SM00962	SRP54-type protein, GTPase domain
CLI14_RS11470	SM00963	SRP54-type protein, helical bundle domain
CLI14_RS11480	SM01091	Transporter associated domain
CLI14_RS11505	SM00829	Enoylreductase
CLI14_RS11570	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CLI14_RS11580	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11590	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11615	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CLI14_RS11615	SM00534	ATPase domain of DNA mismatch repair MUTS family
CLI14_RS11625	SM00257	Lysin motif
CLI14_RS11670	SM00905	Dihydroneopterin aldolase
CLI14_RS11675	SM01207	CLI14_RS11675
CLI14_RS11700	SM00400	zinc finger
CLI14_RS11700	SM00493	CLI14_RS11700
CLI14_RS11700	SM00766	DNA primase DnaG DnaB-binding
CLI14_RS11715	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS11795	SM00487	DEAD-like helicases superfamily
CLI14_RS11865	SM00857	Resolvase, N terminal domain
CLI14_RS11885	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS11905	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS11975	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS12005	SM00482	DNA polymerase A domain
CLI14_RS12035	SM00886	Stress responsive A/B Barrel Domain
CLI14_RS12075	SM00563	Phosphate acyltransferases
CLI14_RS12080	SM00635	Bacterial Ig-like domain 2
CLI14_RS12090	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI14_RS12090	SM01134	CLI14_RS12090
CLI14_RS12100	SM00267	diguanylate cyclase
CLI14_RS12140	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI14_RS12155	SM00861	Transketolase, pyrimidine binding domain
CLI14_RS12165	SM00731	SprT homologues.
CLI14_RS12190	SM00732	Likely ribonuclease with RNase H fold.
CLI14_RS12220	SM01152	CLI14_RS12220
CLI14_RS12235	SM00729	Elongator protein 3, MiaB family, Radical SAM
CLI14_RS12250	SM00478	endonuclease III
CLI14_RS12250	SM00525	CLI14_RS12250
CLI14_RS12310	SM00271	DnaJ molecular chaperone homology domain
CLI14_RS12330	SM00650	Ribosomal RNA adenine dimethylases
CLI14_RS12455	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS12470	SM00487	DEAD-like helicases superfamily
CLI14_RS12535	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS12560	SM00560	LamG-like jellyroll fold domain
CLI14_RS12605	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS12610	SM00028	Tetratricopeptide repeats
CLI14_RS12620	SM00965	Secretin and TonB N terminus short domain
CLI14_RS12640	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS12640	SM00267	diguanylate cyclase
CLI14_RS12650	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS12670	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS12670	SM00924	MgtE intracellular N domain
CLI14_RS12695	SM01018	B12 binding domain
CLI14_RS12790	SM01005	Alanine racemase, C-terminal domain
CLI14_RS12795	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS12830	SM00838	Elongation factor G C-terminus
CLI14_RS12830	SM00889	Elongation factor G, domain IV
CLI14_RS12870	SM00320	WD40 repeats
CLI14_RS12885	SM00244	prohibitin homologues
CLI14_RS12890	SM00244	prohibitin homologues
CLI14_RS12910	SM00853	MutL C terminal dimerisation domain
CLI14_RS12910	SM01340	CLI14_RS12910
CLI14_RS12915	SM00257	Lysin motif
CLI14_RS12915	SM00646	CLI14_RS12915
CLI14_RS12975	SM00479	CLI14_RS12975
CLI14_RS12995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS12995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS13040	SM00663	RNA polymerase I subunit A N-terminus
CLI14_RS13065	SM00649	Ribosomal protein L11/L12
CLI14_RS13070	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CLI14_RS13070	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CLI14_RS13125	SM00155	Phospholipase D. Active site motifs.
CLI14_RS13180	SM00357	Cold shock protein domain
CLI14_RS13180	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS13180	SM00959	Rho termination factor, N-terminal domain
CLI14_RS13190	SM00487	DEAD-like helicases superfamily
CLI14_RS13190	SM00490	helicase superfamily c-terminal domain
CLI14_RS13205	SM00072	Guanylate kinase homologues.
CLI14_RS13210	SM01409	CLI14_RS13210
CLI14_RS13215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS13215	SM00954	Region found in RelA / SpoT proteins
CLI14_RS13220	SM00487	DEAD-like helicases superfamily
CLI14_RS13220	SM00490	helicase superfamily c-terminal domain
CLI14_RS13230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS13230	SM00387	Histidine kinase-like ATPases
CLI14_RS13230	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS13235	SM00448	cheY-homologous receiver domain
CLI14_RS13235	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS13240	SM00495	Chitin-binding domain type 3
CLI14_RS13285	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS13285	SM00732	Likely ribonuclease with RNase H fold.
CLI14_RS13365	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS13380	SM00363	S4 RNA-binding domain
CLI14_RS13420	SM01230	CLI14_RS13420
CLI14_RS13430	SM00091	PAS domain
CLI14_RS13430	SM00387	Histidine kinase-like ATPases
CLI14_RS13430	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS13435	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS13435	SM00448	cheY-homologous receiver domain
CLI14_RS13440	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS13440	SM00267	diguanylate cyclase
CLI14_RS13440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS13515	SM00360	RNA recognition motif
CLI14_RS13555	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS13605	SM00857	Resolvase, N terminal domain
CLI14_RS13640	SM01038	Beta galactosidase small chain
CLI14_RS13680	SM00563	Phosphate acyltransferases
CLI14_RS13705	SM00450	Rhodanese Homology Domain
CLI14_RS13720	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS13725	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS13725	SM00962	SRP54-type protein, GTPase domain
CLI14_RS13725	SM00963	SRP54-type protein, helical bundle domain
CLI14_RS13825	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS13850	SM01144	CLI14_RS13850
CLI14_RS13885	SM01219	CLI14_RS13885
CLI14_RS13970	SM01001	AIR carboxylase
CLI14_RS13995	SM00257	Lysin motif
CLI14_RS14065	SM00487	DEAD-like helicases superfamily
CLI14_RS14065	SM00491	CLI14_RS14065
CLI14_RS14210	SM00829	Enoylreductase
CLI14_RS14270	SM00387	Histidine kinase-like ATPases
CLI14_RS14270	SM00433	TopoisomeraseII
CLI14_RS14280	SM00480	DNA polymerase III beta subunit
CLI14_RS14285	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS14285	SM00760	Bacterial dnaA protein helix-turn-helix domain
CLI14_RS14290	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS14300	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS14315	SM01234	CLI14_RS14315
CLI14_RS14340	SM00470	ParB-like nuclease domain
CLI14_RS14370	SM00448	cheY-homologous receiver domain
CLI14_RS14375	SM00073	Histidine Phosphotransfer domain
CLI14_RS14375	SM00260	Two component signalling adaptor domain
CLI14_RS14375	SM00387	Histidine kinase-like ATPases
CLI14_RS14375	SM01231	CLI14_RS14375
CLI14_RS14380	SM00260	Two component signalling adaptor domain
CLI14_RS14385	SM00260	Two component signalling adaptor domain
CLI14_RS14390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS14390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS14395	SM00138	Methyltransferase, chemotaxis proteins 
CLI14_RS14405	SM00448	cheY-homologous receiver domain
CLI14_RS14410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS14420	SM00331	Sigma factor PP2C-like phosphatases
CLI14_RS14420	SM00448	cheY-homologous receiver domain
CLI14_RS14430	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS14435	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS14435	SM00267	diguanylate cyclase
CLI14_RS14455	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS14470	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS14495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS14495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS14500	SM00344	helix_turn_helix ASNC type
CLI14_RS14520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS14530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS14530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS14530	SM01049	CLI14_RS14530
CLI14_RS14540	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS14555	SM00642	Alpha-amylase domain
CLI14_RS14590	SM00849	Metallo-beta-lactamase superfamily
CLI14_RS14600	SM01350	CLI14_RS14600
CLI14_RS14625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS14625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS14635	SM00849	Metallo-beta-lactamase superfamily
CLI14_RS14655	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS14675	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS14685	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS14700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS14735	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS14760	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS14770	SM00822	CLI14_RS14770
CLI14_RS14800	SM00495	Chitin-binding domain type 3
CLI14_RS14820	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CLI14_RS14835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS14860	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS14865	SM00267	diguanylate cyclase
CLI14_RS14895	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS14895	SM00267	diguanylate cyclase
CLI14_RS14950	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS14965	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS14965	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CLI14_RS14975	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS14995	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS15010	SM00267	diguanylate cyclase
CLI14_RS15030	SM00267	diguanylate cyclase
CLI14_RS15030	SM01079	CLI14_RS15030
CLI14_RS15035	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS15045	SM00267	diguanylate cyclase
CLI14_RS15055	SM00260	Two component signalling adaptor domain
CLI14_RS15055	SM00448	cheY-homologous receiver domain
CLI14_RS15065	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS15070	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS15105	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS15110	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI14_RS15110	SM01134	CLI14_RS15110
CLI14_RS15115	SM00091	PAS domain
CLI14_RS15115	SM00267	diguanylate cyclase
CLI14_RS15125	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS15140	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS15140	SM00448	cheY-homologous receiver domain
CLI14_RS15170	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS15210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CLI14_RS15210	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS15220	SM01322	CLI14_RS15220
CLI14_RS15225	SM00357	Cold shock protein domain
CLI14_RS15240	SM00448	cheY-homologous receiver domain
CLI14_RS15255	SM01240	CLI14_RS15255
CLI14_RS15260	SM00387	Histidine kinase-like ATPases
CLI14_RS15260	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS15260	SM00448	cheY-homologous receiver domain
CLI14_RS15290	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI14_RS15295	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI14_RS15315	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS15320	SM00481	DNA polymerase alpha chain like domain
CLI14_RS15335	SM00387	Histidine kinase-like ATPases
CLI14_RS15340	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS15340	SM00448	cheY-homologous receiver domain
CLI14_RS15370	SM00829	Enoylreductase
CLI14_RS15395	SM00507	HNH nucleases
CLI14_RS15405	SM00267	diguanylate cyclase
CLI14_RS15420	SM00028	Tetratricopeptide repeats
CLI14_RS15425	SM00327	von Willebrand factor (vWF) type A domain
CLI14_RS15445	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS15445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS15460	SM00642	Alpha-amylase domain
CLI14_RS15465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS15465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS15540	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI14_RS15555	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS15555	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS15560	SM00028	Tetratricopeptide repeats
CLI14_RS15575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS15575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS15585	SM01057	Eukaryotic-type carbonic anhydrase
CLI14_RS15590	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS15590	SM00267	diguanylate cyclase
CLI14_RS15640	SM00271	DnaJ molecular chaperone homology domain
CLI14_RS15650	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS15650	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CLI14_RS15650	SM00267	diguanylate cyclase
CLI14_RS15665	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS15680	SM00797	Allophanate hydrolase subunit 2
CLI14_RS15685	SM00796	Allophanate hydrolase subunit 1
CLI14_RS15700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS15710	SM00487	DEAD-like helicases superfamily
CLI14_RS15710	SM00490	helicase superfamily c-terminal domain
CLI14_RS15730	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS15735	SM00327	von Willebrand factor (vWF) type A domain
CLI14_RS15750	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS15895	SM00387	Histidine kinase-like ATPases
CLI14_RS15895	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS15895	SM00448	cheY-homologous receiver domain
CLI14_RS15935	SM00851	MGS-like domain
CLI14_RS15945	SM00387	Histidine kinase-like ATPases
CLI14_RS15945	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS15945	SM00448	cheY-homologous receiver domain
CLI14_RS15970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS15970	SM00387	Histidine kinase-like ATPases
CLI14_RS15970	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS15975	SM00448	cheY-homologous receiver domain
CLI14_RS15985	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS15990	SM00495	Chitin-binding domain type 3
CLI14_RS15990	SM00636	CLI14_RS15990
CLI14_RS16000	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI14_RS16000	SM00267	diguanylate cyclase
CLI14_RS16030	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS16040	SM00267	diguanylate cyclase
CLI14_RS16040	SM00448	cheY-homologous receiver domain
CLI14_RS16050	SM00448	cheY-homologous receiver domain
CLI14_RS16055	SM00448	cheY-homologous receiver domain
CLI14_RS16065	SM00387	Histidine kinase-like ATPases
CLI14_RS16070	SM00387	Histidine kinase-like ATPases
CLI14_RS16070	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS16075	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS16075	SM00267	diguanylate cyclase
CLI14_RS16075	SM00448	cheY-homologous receiver domain
CLI14_RS16080	SM00448	cheY-homologous receiver domain
CLI14_RS16095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CLI14_RS16120	SM00062	Bacterial periplasmic substrate-binding proteins
CLI14_RS16120	SM00267	diguanylate cyclase
CLI14_RS16170	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS16175	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS16190	SM00867	YceI-like domain 
CLI14_RS16195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS16220	SM00861	Transketolase, pyrimidine binding domain
CLI14_RS16235	SM00636	CLI14_RS16235
CLI14_RS16240	SM00450	Rhodanese Homology Domain
CLI14_RS16250	SM00852	Probable molybdopterin binding domain
CLI14_RS16300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS16300	SM00866	CLI14_RS16300
CLI14_RS16320	SM00116	Domain in cystathionine beta-synthase and other proteins.
CLI14_RS16560	SM00857	Resolvase, N terminal domain
CLI14_RS16755	SM00360	RNA recognition motif
CLI14_RS16835	SM00479	CLI14_RS16835
CLI14_RS16850	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS16860	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS16910	SM00881	CoA binding domain
CLI14_RS17030	SM00487	DEAD-like helicases superfamily
CLI14_RS17030	SM00491	CLI14_RS17030
CLI14_RS17265	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CLI14_RS17270	SM00487	DEAD-like helicases superfamily
CLI14_RS17270	SM00490	helicase superfamily c-terminal domain
CLI14_RS17275	SM00316	Ribosomal protein S1-like RNA-binding domain
CLI14_RS17275	SM00357	Cold shock protein domain
CLI14_RS17275	SM00955	CLI14_RS17275
CLI14_RS17315	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS17315	SM00448	cheY-homologous receiver domain
CLI14_RS17320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS17320	SM00387	Histidine kinase-like ATPases
CLI14_RS17335	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CLI14_RS17380	SM00642	Alpha-amylase domain
CLI14_RS17415	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS17435	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI14_RS17435	SM01134	CLI14_RS17435
CLI14_RS17515	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS17540	SM00387	Histidine kinase-like ATPases
CLI14_RS17540	SM00448	cheY-homologous receiver domain
CLI14_RS17555	SM00354	helix_turn _helix lactose operon repressor
CLI14_RS17590	SM00020	Trypsin-like serine protease
CLI14_RS17595	SM00020	Trypsin-like serine protease
CLI14_RS17605	SM00530	Helix-turn-helix XRE-family like proteins 
CLI14_RS17680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS17680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS17685	SM00422	helix_turn_helix, mercury resistance
CLI14_RS17725	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS17730	SM00421	helix_turn_helix, Lux Regulon
CLI14_RS17745	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS17785	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CLI14_RS17800	SM00458	Ricin-type beta-trefoil
CLI14_RS17810	SM00344	helix_turn_helix ASNC type
CLI14_RS17840	SM00387	Histidine kinase-like ATPases
CLI14_RS17845	SM00448	cheY-homologous receiver domain
CLI14_RS17850	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS17860	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS17860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS17905	SM01266	CLI14_RS17905
CLI14_RS17950	SM00387	Histidine kinase-like ATPases
CLI14_RS17950	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS17950	SM00448	cheY-homologous receiver domain
CLI14_RS17955	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CLI14_RS17980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS17980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS17985	SM00073	Histidine Phosphotransfer domain
CLI14_RS17985	SM00091	PAS domain
CLI14_RS17985	SM00387	Histidine kinase-like ATPases
CLI14_RS17985	SM00388	His Kinase A (phosphoacceptor) domain
CLI14_RS17985	SM00448	cheY-homologous receiver domain
CLI14_RS17990	SM00448	cheY-homologous receiver domain
CLI14_RS17990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLI14_RS18010	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS18015	SM00448	cheY-homologous receiver domain
CLI14_RS18015	SM00850	LytTr DNA-binding domain
CLI14_RS18040	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS18055	SM00642	Alpha-amylase domain
CLI14_RS18130	SM00487	DEAD-like helicases superfamily
CLI14_RS18130	SM00490	helicase superfamily c-terminal domain
CLI14_RS18140	SM00257	Lysin motif
CLI14_RS18150	SM00422	helix_turn_helix, mercury resistance
CLI14_RS18170	SM00028	Tetratricopeptide repeats
CLI14_RS18175	SM00267	diguanylate cyclase
CLI14_RS18245	SM00671	Sel1-like repeats.
CLI14_RS18250	SM00642	Alpha-amylase domain
CLI14_RS18280	SM00642	Alpha-amylase domain
CLI14_RS18290	SM00420	helix_turn_helix, Deoxyribose operon repressor
CLI14_RS18290	SM01134	CLI14_RS18290
CLI14_RS18305	SM01007	Class II Aldolase and Adducin N-terminal domain
CLI14_RS18315	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLI14_RS18330	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CLI14_RS18330	SM00267	diguanylate cyclase
CLI14_RS18340	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS18350	SM00014	Acid phosphatase homologues
CLI14_RS18365	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS18365	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS18380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CLI14_RS18380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLI14_RS18390	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS18395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS18400	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CLI14_RS18400	SM00495	Chitin-binding domain type 3
CLI14_RS18400	SM00636	CLI14_RS18400
CLI14_RS18490	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS18495	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS18495	SM01086	C-terminal, D2-small domain, of ClpB protein
CLI14_RS18560	SM00387	Histidine kinase-like ATPases
CLI14_RS18565	SM00448	cheY-homologous receiver domain
CLI14_RS18565	SM00862	Transcriptional regulatory protein, C terminal
CLI14_RS18585	SM00829	Enoylreductase
CLI14_RS18620	SM00487	DEAD-like helicases superfamily
CLI14_RS18620	SM00490	helicase superfamily c-terminal domain
CLI14_RS18625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CLI14_RS18625	SM00866	CLI14_RS18625
CLI14_RS18650	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS18665	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS18675	SM00450	Rhodanese Homology Domain
CLI14_RS18685	SM00052	Putative diguanylate phosphodiesterase
CLI14_RS18695	SM00347	helix_turn_helix multiple antibiotic resistance protein
CLI14_RS18785	SM00342	helix_turn_helix, arabinose operon control protein
CLI14_RS18785	SM01009	AlkA N-terminal domain
CLI14_RS18965	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS19040	SM00857	Resolvase, N terminal domain
CLI14_RS19130	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS19135	SM00382	ATPases associated with a variety of cellular activities
CLI14_RS19195	SM00470	ParB-like nuclease domain
