CEJ46_RS00020	SM01234	CEJ46_RS00020
CEJ46_RS00035	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS00045	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS00050	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS00050	SM00760	Bacterial dnaA protein helix-turn-helix domain
CEJ46_RS00055	SM00480	DNA polymerase III beta subunit
CEJ46_RS00065	SM00387	Histidine kinase-like ATPases
CEJ46_RS00065	SM00433	TopoisomeraseII
CEJ46_RS00125	SM00829	Enoylreductase
CEJ46_RS00180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS00180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS00185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS00185	SM01358	CEJ46_RS00185
CEJ46_RS00200	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS00210	SM00999	Aerolysin toxin
CEJ46_RS00300	SM00257	Lysin motif
CEJ46_RS00325	SM01001	AIR carboxylase
CEJ46_RS00390	SM01321	CEJ46_RS00390
CEJ46_RS00420	SM01219	CEJ46_RS00420
CEJ46_RS00455	SM01144	CEJ46_RS00455
CEJ46_RS00480	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS00530	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS00530	SM00962	SRP54-type protein, GTPase domain
CEJ46_RS00530	SM00963	SRP54-type protein, helical bundle domain
CEJ46_RS00535	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS00550	SM00450	Rhodanese Homology Domain
CEJ46_RS00575	SM00563	Phosphate acyltransferases
CEJ46_RS00610	SM01038	Beta galactosidase small chain
CEJ46_RS00640	SM00360	RNA recognition motif
CEJ46_RS00715	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS00715	SM00267	diguanylate cyclase
CEJ46_RS00715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS00720	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS00720	SM00448	cheY-homologous receiver domain
CEJ46_RS00725	SM00091	PAS domain
CEJ46_RS00725	SM00387	Histidine kinase-like ATPases
CEJ46_RS00725	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS00735	SM01230	CEJ46_RS00735
CEJ46_RS00775	SM00363	S4 RNA-binding domain
CEJ46_RS00790	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS00870	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS00870	SM00732	Likely ribonuclease with RNase H fold.
CEJ46_RS00915	SM00448	cheY-homologous receiver domain
CEJ46_RS00915	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS00920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS00920	SM00387	Histidine kinase-like ATPases
CEJ46_RS00920	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS00930	SM00487	DEAD-like helicases superfamily
CEJ46_RS00930	SM00490	helicase superfamily c-terminal domain
CEJ46_RS00935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS00935	SM00954	Region found in RelA / SpoT proteins
CEJ46_RS00940	SM01409	CEJ46_RS00940
CEJ46_RS00945	SM00072	Guanylate kinase homologues.
CEJ46_RS00960	SM00487	DEAD-like helicases superfamily
CEJ46_RS00960	SM00490	helicase superfamily c-terminal domain
CEJ46_RS00970	SM00357	Cold shock protein domain
CEJ46_RS00970	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS00970	SM00959	Rho termination factor, N-terminal domain
CEJ46_RS01030	SM00155	Phospholipase D. Active site motifs.
CEJ46_RS01085	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CEJ46_RS01085	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CEJ46_RS01090	SM00649	Ribosomal protein L11/L12
CEJ46_RS01115	SM00663	RNA polymerase I subunit A N-terminus
CEJ46_RS01160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS01160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS01180	SM00479	CEJ46_RS01180
CEJ46_RS01240	SM00257	Lysin motif
CEJ46_RS01240	SM00646	CEJ46_RS01240
CEJ46_RS01245	SM00853	MutL C terminal dimerisation domain
CEJ46_RS01245	SM01340	CEJ46_RS01245
CEJ46_RS01265	SM00244	prohibitin homologues
CEJ46_RS01270	SM00244	prohibitin homologues
CEJ46_RS01285	SM00320	WD40 repeats
CEJ46_RS01325	SM00838	Elongation factor G C-terminus
CEJ46_RS01325	SM00889	Elongation factor G, domain IV
CEJ46_RS01360	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS01365	SM01005	Alanine racemase, C-terminal domain
CEJ46_RS01500	SM01018	B12 binding domain
CEJ46_RS01525	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS01525	SM00924	MgtE intracellular N domain
CEJ46_RS01545	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS01555	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS01555	SM00267	diguanylate cyclase
CEJ46_RS01575	SM00965	Secretin and TonB N terminus short domain
CEJ46_RS01580	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS01585	SM00028	Tetratricopeptide repeats
CEJ46_RS01590	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS01660	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS01725	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS01735	SM00487	DEAD-like helicases superfamily
CEJ46_RS01855	SM00650	Ribosomal RNA adenine dimethylases
CEJ46_RS01875	SM00271	DnaJ molecular chaperone homology domain
CEJ46_RS01935	SM00478	endonuclease III
CEJ46_RS01935	SM00525	CEJ46_RS01935
CEJ46_RS01975	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS01990	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS02025	SM00478	endonuclease III
CEJ46_RS02040	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS02055	SM01152	CEJ46_RS02055
CEJ46_RS02085	SM00732	Likely ribonuclease with RNase H fold.
CEJ46_RS02110	SM00731	SprT homologues.
CEJ46_RS02120	SM00861	Transketolase, pyrimidine binding domain
CEJ46_RS02135	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_RS02175	SM00091	PAS domain
CEJ46_RS02175	SM00267	diguanylate cyclase
CEJ46_RS02185	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_RS02185	SM01134	CEJ46_RS02185
CEJ46_RS02200	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS02210	SM00487	DEAD-like helicases superfamily
CEJ46_RS02270	SM00387	Histidine kinase-like ATPases
CEJ46_RS02280	SM00563	Phosphate acyltransferases
CEJ46_RS02320	SM00886	Stress responsive A/B Barrel Domain
CEJ46_RS02400	SM00028	Tetratricopeptide repeats
CEJ46_RS02410	SM00671	Sel1-like repeats.
CEJ46_RS02460	SM00487	DEAD-like helicases superfamily
CEJ46_RS02460	SM00490	helicase superfamily c-terminal domain
CEJ46_RS02500	SM00400	zinc finger
CEJ46_RS02500	SM00493	CEJ46_RS02500
CEJ46_RS02500	SM00766	DNA primase DnaG DnaB-binding
CEJ46_RS02525	SM01207	CEJ46_RS02525
CEJ46_RS02530	SM00905	Dihydroneopterin aldolase
CEJ46_RS02575	SM00257	Lysin motif
CEJ46_RS02585	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CEJ46_RS02585	SM00534	ATPase domain of DNA mismatch repair MUTS family
CEJ46_RS02610	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS02620	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS02630	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CEJ46_RS02700	SM00829	Enoylreductase
CEJ46_RS02725	SM01091	Transporter associated domain
CEJ46_RS02735	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS02735	SM00962	SRP54-type protein, GTPase domain
CEJ46_RS02735	SM00963	SRP54-type protein, helical bundle domain
CEJ46_RS02800	SM00644	CEJ46_RS02800
CEJ46_RS02825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS02825	SM00895	CEJ46_RS02825
CEJ46_RS02855	SM00947	Carbonic anhydrase
CEJ46_RS02865	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS02920	SM00487	DEAD-like helicases superfamily
CEJ46_RS02920	SM00490	helicase superfamily c-terminal domain
CEJ46_RS02920	SM00847	Helicase associated domain (HA2)  Add an annotation
CEJ46_RS02960	SM00938	Nitrogen regulatory protein P-II
CEJ46_RS02980	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS02990	SM01068	Putative carbohydrate binding domain
CEJ46_RS03010	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03015	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03035	SM00091	PAS domain
CEJ46_RS03035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS03035	SM00387	Histidine kinase-like ATPases
CEJ46_RS03035	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS03035	SM00448	cheY-homologous receiver domain
CEJ46_RS03105	SM01103	CEJ46_RS03105
CEJ46_RS03115	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03150	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS03150	SM00322	K homology RNA-binding domain
CEJ46_RS03170	SM01387	CEJ46_RS03170
CEJ46_RS03175	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS03175	SM00322	K homology RNA-binding domain
CEJ46_RS03180	SM00028	Tetratricopeptide repeats
CEJ46_RS03185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS03205	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS03205	SM00091	PAS domain
CEJ46_RS03205	SM00267	diguanylate cyclase
CEJ46_RS03230	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS03230	SM00267	diguanylate cyclase
CEJ46_RS03240	SM00487	DEAD-like helicases superfamily
CEJ46_RS03240	SM00490	helicase superfamily c-terminal domain
CEJ46_RS03265	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03280	SM00927	DNA mismatch repair enzyme MutH
CEJ46_RS03290	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CEJ46_RS03320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_RS03335	SM00904	Riboflavin kinase
CEJ46_RS03385	SM00448	cheY-homologous receiver domain
CEJ46_RS03385	SM00850	LytTr DNA-binding domain
CEJ46_RS03400	SM00830	Chorismate mutase type II
CEJ46_RS03410	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03430	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS03430	SM00267	diguanylate cyclase
CEJ46_RS03440	SM00830	Chorismate mutase type II
CEJ46_RS03455	SM00363	S4 RNA-binding domain
CEJ46_RS03465	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03465	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_RS03525	SM00448	cheY-homologous receiver domain
CEJ46_RS03525	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS03530	SM00091	PAS domain
CEJ46_RS03530	SM00387	Histidine kinase-like ATPases
CEJ46_RS03530	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS03560	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03595	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS03610	SM01323	CEJ46_RS03610
CEJ46_RS03655	SM00271	DnaJ molecular chaperone homology domain
CEJ46_RS03680	SM00562	CEJ46_RS03680
CEJ46_RS03710	SM00564	beta-propeller repeat
CEJ46_RS03715	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS03730	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS03730	SM01240	CEJ46_RS03730
CEJ46_RS03770	SM00495	Chitin-binding domain type 3
CEJ46_RS03935	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS03950	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS04060	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_RS04060	SM01134	CEJ46_RS04060
CEJ46_RS04065	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_RS04065	SM01134	CEJ46_RS04065
CEJ46_RS04200	SM00271	DnaJ molecular chaperone homology domain
CEJ46_RS04240	SM00829	Enoylreductase
CEJ46_RS04255	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS04265	SM01211	CEJ46_RS04265
CEJ46_RS04345	SM00861	Transketolase, pyrimidine binding domain
CEJ46_RS04370	SM00981	CEJ46_RS04370
CEJ46_RS04390	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CEJ46_RS04390	SM00475	5'-3' exonuclease
CEJ46_RS04400	SM00267	diguanylate cyclase
CEJ46_RS04405	SM00028	Tetratricopeptide repeats
CEJ46_RS04435	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS04435	SM00930	CEJ46_RS04435
CEJ46_RS04450	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS04460	SM00642	Alpha-amylase domain
CEJ46_RS04465	SM00448	cheY-homologous receiver domain
CEJ46_RS04465	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS04470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS04470	SM00387	Histidine kinase-like ATPases
CEJ46_RS04470	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS04520	SM01321	CEJ46_RS04520
CEJ46_RS04530	SM00226	Low molecular weight phosphatase family
CEJ46_RS04540	SM00984	UDP binding domain
CEJ46_RS04545	SM00984	UDP binding domain
CEJ46_RS04655	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS04670	SM00936	Penicillin-binding protein 5, C-terminal domain 
CEJ46_RS04725	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS04725	SM01091	Transporter associated domain
CEJ46_RS04740	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS04775	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CEJ46_RS04780	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEJ46_RS04780	SM00292	breast cancer carboxy-terminal domain
CEJ46_RS04780	SM00532	Ligase N family
CEJ46_RS04795	SM00422	helix_turn_helix, mercury resistance
CEJ46_RS04805	SM00244	prohibitin homologues
CEJ46_RS04840	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS04845	SM00387	Histidine kinase-like ATPases
CEJ46_RS04865	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CEJ46_RS04940	SM00479	CEJ46_RS04940
CEJ46_RS05015	SM00478	endonuclease III
CEJ46_RS05015	SM00525	CEJ46_RS05015
CEJ46_RS05025	SM00900	CEJ46_RS05025
CEJ46_RS05065	SM00923	MbtH-like protein
CEJ46_RS05070	SM00823	Phosphopantetheine attachment site
CEJ46_RS05070	SM00824	Thioesterase
CEJ46_RS05140	SM00487	DEAD-like helicases superfamily
CEJ46_RS05140	SM00490	helicase superfamily c-terminal domain
CEJ46_RS05145	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS05145	SM00448	cheY-homologous receiver domain
CEJ46_RS05160	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS05165	SM00852	Probable molybdopterin binding domain
CEJ46_RS05185	SM00267	diguanylate cyclase
CEJ46_RS05190	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS05280	SM00448	cheY-homologous receiver domain
CEJ46_RS05300	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS05310	SM00493	CEJ46_RS05310
CEJ46_RS05345	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_RS05365	SM00870	CEJ46_RS05365
CEJ46_RS05390	SM00487	DEAD-like helicases superfamily
CEJ46_RS05390	SM00491	CEJ46_RS05390
CEJ46_RS05420	SM00474	3'-5' exonuclease
CEJ46_RS05460	SM00495	Chitin-binding domain type 3
CEJ46_RS05460	SM00636	CEJ46_RS05460
CEJ46_RS05500	SM00642	Alpha-amylase domain
CEJ46_RS05505	SM00487	DEAD-like helicases superfamily
CEJ46_RS05505	SM00490	helicase superfamily c-terminal domain
CEJ46_RS05530	SM00448	cheY-homologous receiver domain
CEJ46_RS05530	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS05535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS05535	SM00387	Histidine kinase-like ATPases
CEJ46_RS05565	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS05565	SM00448	cheY-homologous receiver domain
CEJ46_RS05570	SM00387	Histidine kinase-like ATPases
CEJ46_RS05570	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS05590	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS05590	SM00994	ClpX C4-type zinc finger
CEJ46_RS05590	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_RS05595	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS05595	SM00464	Found in ATP-dependent protease La (LON)
CEJ46_RS05600	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_RS05620	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS05625	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_RS05635	SM00028	Tetratricopeptide repeats
CEJ46_RS05640	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CEJ46_RS05660	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CEJ46_RS05660	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CEJ46_RS05665	SM00344	helix_turn_helix ASNC type
CEJ46_RS05670	SM00843	CEJ46_RS05670
CEJ46_RS05725	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS05730	SM00020	Trypsin-like serine protease
CEJ46_RS05735	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS05735	SM00091	PAS domain
CEJ46_RS05830	SM00481	DNA polymerase alpha chain like domain
CEJ46_RS05840	SM00363	S4 RNA-binding domain
CEJ46_RS05845	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS05845	SM00267	diguanylate cyclase
CEJ46_RS05850	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS05855	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS05865	SM00267	diguanylate cyclase
CEJ46_RS05890	SM00919	Malic enzyme, NAD binding domain
CEJ46_RS05890	SM01274	CEJ46_RS05890
CEJ46_RS05955	SM00448	cheY-homologous receiver domain
CEJ46_RS05960	SM00387	Histidine kinase-like ATPases
CEJ46_RS06000	SM00528	Domain in histone-like proteins of HNS family
CEJ46_RS06060	SM00357	Cold shock protein domain
CEJ46_RS06070	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06070	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_RS06075	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS06100	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CEJ46_RS06100	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CEJ46_RS06100	SM00493	CEJ46_RS06100
CEJ46_RS06135	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS06145	SM00448	cheY-homologous receiver domain
CEJ46_RS06145	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS06270	SM01131	CEJ46_RS06270
CEJ46_RS06285	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06290	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06295	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06315	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06345	SM00155	Phospholipase D. Active site motifs.
CEJ46_RS06365	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS06375	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06415	SM00487	DEAD-like helicases superfamily
CEJ46_RS06415	SM00490	helicase superfamily c-terminal domain
CEJ46_RS06435	SM00387	Histidine kinase-like ATPases
CEJ46_RS06440	SM00448	cheY-homologous receiver domain
CEJ46_RS06440	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS06450	SM00487	DEAD-like helicases superfamily
CEJ46_RS06450	SM00490	helicase superfamily c-terminal domain
CEJ46_RS06455	SM00363	S4 RNA-binding domain
CEJ46_RS06480	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS06525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS06525	SM01049	CEJ46_RS06525
CEJ46_RS06540	SM00852	Probable molybdopterin binding domain
CEJ46_RS06570	SM00434	DNA Topoisomerase IV
CEJ46_RS06575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS06595	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS06635	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS06660	SM00387	Histidine kinase-like ATPases
CEJ46_RS06660	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS06665	SM00448	cheY-homologous receiver domain
CEJ46_RS06665	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS06690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS06690	SM00895	CEJ46_RS06690
CEJ46_RS06760	SM00327	von Willebrand factor (vWF) type A domain
CEJ46_RS06765	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CEJ46_RS06785	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06800	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS06810	SM00028	Tetratricopeptide repeats
CEJ46_RS06810	SM00267	diguanylate cyclase
CEJ46_RS06840	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS06850	SM01321	CEJ46_RS06850
CEJ46_RS06870	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS06880	SM00945	ProQ/FINO family
CEJ46_RS06885	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_RS06885	SM00245	tail specific protease
CEJ46_RS06920	SM00981	CEJ46_RS06920
CEJ46_RS06930	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS07015	SM00100	Cyclic nucleotide-monophosphate binding domain
CEJ46_RS07015	SM00419	helix_turn_helix, cAMP Regulatory protein
CEJ46_RS07045	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS07080	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS07085	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS07085	SM00448	cheY-homologous receiver domain
CEJ46_RS07090	SM00387	Histidine kinase-like ATPases
CEJ46_RS07110	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS07135	SM01144	CEJ46_RS07135
CEJ46_RS07145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07215	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS07300	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS07300	SM00487	DEAD-like helicases superfamily
CEJ46_RS07300	SM00490	helicase superfamily c-terminal domain
CEJ46_RS07300	SM00847	Helicase associated domain (HA2)  Add an annotation
CEJ46_RS07315	SM00479	CEJ46_RS07315
CEJ46_RS07320	SM00267	diguanylate cyclase
CEJ46_RS07320	SM01079	CEJ46_RS07320
CEJ46_RS07365	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS07375	SM00487	DEAD-like helicases superfamily
CEJ46_RS07375	SM00490	helicase superfamily c-terminal domain
CEJ46_RS07390	SM00357	Cold shock protein domain
CEJ46_RS07400	SM00448	cheY-homologous receiver domain
CEJ46_RS07405	SM00387	Histidine kinase-like ATPases
CEJ46_RS07415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS07420	SM01005	Alanine racemase, C-terminal domain
CEJ46_RS07430	SM00267	diguanylate cyclase
CEJ46_RS07445	SM00091	PAS domain
CEJ46_RS07445	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS07505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS07520	SM00448	cheY-homologous receiver domain
CEJ46_RS07530	SM00138	Methyltransferase, chemotaxis proteins 
CEJ46_RS07535	SM00260	Two component signalling adaptor domain
CEJ46_RS07540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS07545	SM00073	Histidine Phosphotransfer domain
CEJ46_RS07545	SM00260	Two component signalling adaptor domain
CEJ46_RS07545	SM00387	Histidine kinase-like ATPases
CEJ46_RS07545	SM01231	CEJ46_RS07545
CEJ46_RS07555	SM00448	cheY-homologous receiver domain
CEJ46_RS07560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07565	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS07575	SM00100	Cyclic nucleotide-monophosphate binding domain
CEJ46_RS07575	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS07580	SM00479	CEJ46_RS07580
CEJ46_RS07585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS07595	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS07610	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS07695	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS07700	SM00450	Rhodanese Homology Domain
CEJ46_RS07705	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS07710	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS07720	SM00640	Glycosyl hydrolases family 32
CEJ46_RS07725	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS07740	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS07750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS07750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS07880	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS07890	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS07960	SM00220	Serine/Threonine protein kinases, catalytic domain
CEJ46_RS07985	SM00240	Forkhead associated domain
CEJ46_RS08010	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08010	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_RS08095	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS08110	SM00267	diguanylate cyclase
CEJ46_RS08120	SM00642	Alpha-amylase domain
CEJ46_RS08130	SM00260	Two component signalling adaptor domain
CEJ46_RS08130	SM00448	cheY-homologous receiver domain
CEJ46_RS08135	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS08140	SM00448	cheY-homologous receiver domain
CEJ46_RS08145	SM00387	Histidine kinase-like ATPases
CEJ46_RS08185	SM00028	Tetratricopeptide repeats
CEJ46_RS08185	SM00386	HAT (Half-A-TPR) repeats
CEJ46_RS08230	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08245	SM00855	Phosphoglycerate mutase family
CEJ46_RS08280	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08290	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS08295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS08310	SM00479	CEJ46_RS08310
CEJ46_RS08330	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS08330	SM00267	diguanylate cyclase
CEJ46_RS08340	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CEJ46_RS08340	SM00091	PAS domain
CEJ46_RS08340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS08355	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_RS08360	SM00873	B3/4 domain
CEJ46_RS08360	SM00874	tRNA synthetase B5 domain
CEJ46_RS08360	SM00896	Ferredoxin-fold anticodon binding domain
CEJ46_RS08405	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEJ46_RS08405	SM00465	GIY-YIG type nucleases (URI domain)
CEJ46_RS08410	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS08410	SM00448	cheY-homologous receiver domain
CEJ46_RS08415	SM00486	DNA polymerase type-B family
CEJ46_RS08425	SM00841	Elongation factor P, C-terminal
CEJ46_RS08425	SM01185	CEJ46_RS08425
CEJ46_RS08435	SM01022	CEJ46_RS08435
CEJ46_RS08440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS08440	SM00866	CEJ46_RS08440
CEJ46_RS08490	SM00671	Sel1-like repeats.
CEJ46_RS08545	SM00267	diguanylate cyclase
CEJ46_RS08565	SM00387	Histidine kinase-like ATPases
CEJ46_RS08565	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS08565	SM00448	cheY-homologous receiver domain
CEJ46_RS08580	SM00028	Tetratricopeptide repeats
CEJ46_RS08635	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08640	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEJ46_RS08650	SM00840	CEJ46_RS08650
CEJ46_RS08665	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS08685	SM00491	CEJ46_RS08685
CEJ46_RS08705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS08705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS08725	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS08725	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CEJ46_RS08730	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS08755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS08785	SM00763	PrkA AAA domain
CEJ46_RS08815	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08820	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS08835	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08850	SM00487	DEAD-like helicases superfamily
CEJ46_RS08850	SM00490	helicase superfamily c-terminal domain
CEJ46_RS08850	SM00982	CEJ46_RS08850
CEJ46_RS08850	SM01058	CarD-like/TRCF domain
CEJ46_RS08900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS08900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS08910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS08940	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS08940	SM00876	Biotin and Thiamin Synthesis associated domain
CEJ46_RS08955	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS08975	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS09010	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS09015	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS09035	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS09035	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS09035	SM00448	cheY-homologous receiver domain
CEJ46_RS09060	SM00563	Phosphate acyltransferases
CEJ46_RS09120	SM00825	Beta-ketoacyl synthase
CEJ46_RS09130	SM00822	CEJ46_RS09130
CEJ46_RS09135	SM00825	Beta-ketoacyl synthase
CEJ46_RS09155	SM00267	diguanylate cyclase
CEJ46_RS09185	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS09200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS09200	SM00387	Histidine kinase-like ATPases
CEJ46_RS09200	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS09205	SM00448	cheY-homologous receiver domain
CEJ46_RS09205	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS09220	SM00344	helix_turn_helix ASNC type
CEJ46_RS09230	SM00387	Histidine kinase-like ATPases
CEJ46_RS09230	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS09235	SM00448	cheY-homologous receiver domain
CEJ46_RS09235	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS09250	SM01236	CEJ46_RS09250
CEJ46_RS09295	SM00857	Resolvase, N terminal domain
CEJ46_RS09300	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS09345	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS09345	SM00267	diguanylate cyclase
CEJ46_RS09370	SM00344	helix_turn_helix ASNC type
CEJ46_RS09380	SM00978	CEJ46_RS09380
CEJ46_RS09390	SM00563	Phosphate acyltransferases
CEJ46_RS09410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CEJ46_RS09445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS09450	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS09455	SM01144	CEJ46_RS09455
CEJ46_RS09475	SM00260	Two component signalling adaptor domain
CEJ46_RS09475	SM00448	cheY-homologous receiver domain
CEJ46_RS09540	SM00825	Beta-ketoacyl synthase
CEJ46_RS09550	SM00822	CEJ46_RS09550
CEJ46_RS09555	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CEJ46_RS09585	SM00363	S4 RNA-binding domain
CEJ46_RS09590	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS09610	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_RS09670	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CEJ46_RS09670	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CEJ46_RS09670	SM00493	CEJ46_RS09670
CEJ46_RS09740	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS09750	SM00260	Two component signalling adaptor domain
CEJ46_RS09755	SM00260	Two component signalling adaptor domain
CEJ46_RS09765	SM00448	cheY-homologous receiver domain
CEJ46_RS09770	SM00073	Histidine Phosphotransfer domain
CEJ46_RS09770	SM00260	Two component signalling adaptor domain
CEJ46_RS09770	SM00387	Histidine kinase-like ATPases
CEJ46_RS09770	SM01231	CEJ46_RS09770
CEJ46_RS09780	SM00448	cheY-homologous receiver domain
CEJ46_RS09795	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS09795	SM00962	SRP54-type protein, GTPase domain
CEJ46_RS09805	SM00855	Phosphoglycerate mutase family
CEJ46_RS09820	SM00836	DALR anticodon binding domain
CEJ46_RS09820	SM01016	Arginyl tRNA synthetase N terminal dom
CEJ46_RS09840	SM00899	CEJ46_RS09840
CEJ46_RS09845	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS09855	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS09865	SM00881	CoA binding domain
CEJ46_RS09880	SM00861	Transketolase, pyrimidine binding domain
CEJ46_RS09970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_RS09980	SM00825	Beta-ketoacyl synthase
CEJ46_RS10020	SM00463	Small MutS-related domain
CEJ46_RS10075	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS10100	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS10100	SM00448	cheY-homologous receiver domain
CEJ46_RS10105	SM00091	PAS domain
CEJ46_RS10105	SM00387	Histidine kinase-like ATPases
CEJ46_RS10105	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS10110	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS10200	SM01130	CEJ46_RS10200
CEJ46_RS10230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS10230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS10305	SM00937	CEJ46_RS10305
CEJ46_RS10325	SM01400	CEJ46_RS10325
CEJ46_RS10445	SM00047	Lysozyme subfamily 2
CEJ46_RS10490	SM00138	Methyltransferase, chemotaxis proteins 
CEJ46_RS10495	SM00260	Two component signalling adaptor domain
CEJ46_RS10495	SM00448	cheY-homologous receiver domain
CEJ46_RS10500	SM00858	CEJ46_RS10500
CEJ46_RS10650	SM01081	Putative carbohydrate binding domain
CEJ46_RS10670	SM00363	S4 RNA-binding domain
CEJ46_RS10710	SM00479	CEJ46_RS10710
CEJ46_RS10725	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS10730	SM00257	Lysin motif
CEJ46_RS10745	SM00938	Nitrogen regulatory protein P-II
CEJ46_RS10755	SM00977	TilS substrate C-terminal domain
CEJ46_RS10765	SM00481	DNA polymerase alpha chain like domain
CEJ46_RS10795	SM00935	Outer membrane protein (OmpH-like)
CEJ46_RS10805	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_RS10850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS10905	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CEJ46_RS10955	SM00267	diguanylate cyclase
CEJ46_RS11000	SM00900	CEJ46_RS11000
CEJ46_RS11050	SM00464	Found in ATP-dependent protease La (LON)
CEJ46_RS11085	SM00925	MltA specific insert domain
CEJ46_RS11105	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS11165	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS11210	SM00838	Elongation factor G C-terminus
CEJ46_RS11210	SM00889	Elongation factor G, domain IV
CEJ46_RS11215	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS11245	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CEJ46_RS11250	SM01133	CEJ46_RS11250
CEJ46_RS11285	SM00986	Uracil DNA glycosylase superfamily
CEJ46_RS11285	SM00987	UreE urease accessory protein, C-terminal domain 
CEJ46_RS11290	SM00518	AP endonuclease family 2
CEJ46_RS11325	SM00448	cheY-homologous receiver domain
CEJ46_RS11325	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS11335	SM00073	Histidine Phosphotransfer domain
CEJ46_RS11335	SM00091	PAS domain
CEJ46_RS11335	SM00387	Histidine kinase-like ATPases
CEJ46_RS11335	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS11335	SM00448	cheY-homologous receiver domain
CEJ46_RS11340	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS11400	SM00851	MGS-like domain
CEJ46_RS11400	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CEJ46_RS11405	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CEJ46_RS11420	SM00957	SecA DEAD-like domain
CEJ46_RS11420	SM00958	SecA preprotein cross-linking domain
CEJ46_RS11435	SM00864	Tubulin/FtsZ family, GTPase domain
CEJ46_RS11435	SM00865	Tubulin/FtsZ family, C-terminal domain
CEJ46_RS11440	SM00842	Cell division protein FtsA
CEJ46_RS11525	SM00749	bacterial OsmY and nodulation domain
CEJ46_RS11580	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_RS11585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_RS11590	SM00434	DNA Topoisomerase IV
CEJ46_RS11595	SM00387	Histidine kinase-like ATPases
CEJ46_RS11595	SM00433	TopoisomeraseII
CEJ46_RS11635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS11645	SM00880	CEJ46_RS11645
CEJ46_RS11645	SM01118	CEJ46_RS11645
CEJ46_RS11660	SM00287	Bacterial SH3 domain homologues
CEJ46_RS11670	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS11680	SM01192	CEJ46_RS11680
CEJ46_RS11680	SM01193	CEJ46_RS11680
CEJ46_RS11695	SM00954	Region found in RelA / SpoT proteins
CEJ46_RS11705	SM00073	Histidine Phosphotransfer domain
CEJ46_RS11705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS11705	SM00387	Histidine kinase-like ATPases
CEJ46_RS11705	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS11705	SM00448	cheY-homologous receiver domain
CEJ46_RS11730	SM00358	Double-stranded RNA binding motif
CEJ46_RS11730	SM00535	Ribonuclease III family
CEJ46_RS11860	SM00014	Acid phosphatase homologues
CEJ46_RS11865	SM00917	LeuA allosteric (dimerisation) domain
CEJ46_RS11870	SM01329	CEJ46_RS11870
CEJ46_RS11930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS11985	SM00487	DEAD-like helicases superfamily
CEJ46_RS11985	SM00490	helicase superfamily c-terminal domain
CEJ46_RS11995	SM00670	Large family of predicted nucleotide-binding domains
CEJ46_RS12020	SM00989	CEJ46_RS12020
CEJ46_RS12025	SM00387	Histidine kinase-like ATPases
CEJ46_RS12030	SM00563	Phosphate acyltransferases
CEJ46_RS12065	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS12075	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS12095	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS12125	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS12125	SM00924	MgtE intracellular N domain
CEJ46_RS12140	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS12215	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS12290	SM00563	Phosphate acyltransferases
CEJ46_RS12295	SM00487	DEAD-like helicases superfamily
CEJ46_RS12295	SM00490	helicase superfamily c-terminal domain
CEJ46_RS12320	SM00662	RNA polymerases D
CEJ46_RS12325	SM00363	S4 RNA-binding domain
CEJ46_RS12325	SM01390	CEJ46_RS12325
CEJ46_RS12390	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CEJ46_RS12395	SM01374	CEJ46_RS12395
CEJ46_RS12415	SM00322	K homology RNA-binding domain
CEJ46_RS12430	SM01382	CEJ46_RS12430
CEJ46_RS12430	SM01383	CEJ46_RS12430
CEJ46_RS12450	SM01403	CEJ46_RS12450
CEJ46_RS12455	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CEJ46_RS12460	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS12460	SM00357	Cold shock protein domain
CEJ46_RS12460	SM00955	CEJ46_RS12460
CEJ46_RS12465	SM00671	Sel1-like repeats.
CEJ46_RS12475	SM00788	Adenylosuccinate synthetase
CEJ46_RS12505	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS12530	SM00100	Cyclic nucleotide-monophosphate binding domain
CEJ46_RS12530	SM00419	helix_turn_helix, cAMP Regulatory protein
CEJ46_RS12535	SM01150	CEJ46_RS12535
CEJ46_RS12630	SM00965	Secretin and TonB N terminus short domain
CEJ46_RS12695	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_RS12715	SM00971	Serine acetyltransferase, N-terminal
CEJ46_RS12730	SM00450	Rhodanese Homology Domain
CEJ46_RS12760	SM00841	Elongation factor P, C-terminal
CEJ46_RS12760	SM01185	CEJ46_RS12760
CEJ46_RS12785	SM00883	Chaperonin 10 Kd subunit
CEJ46_RS12830	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS12830	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_RS12845	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS12850	SM00487	DEAD-like helicases superfamily
CEJ46_RS12850	SM00490	helicase superfamily c-terminal domain
CEJ46_RS12860	SM00919	Malic enzyme, NAD binding domain
CEJ46_RS12860	SM01274	CEJ46_RS12860
CEJ46_RS12910	SM00448	cheY-homologous receiver domain
CEJ46_RS12910	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS12915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS12915	SM00387	Histidine kinase-like ATPases
CEJ46_RS12915	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS12925	SM00357	Cold shock protein domain
CEJ46_RS12990	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS12990	SM00448	cheY-homologous receiver domain
CEJ46_RS12995	SM01091	Transporter associated domain
CEJ46_RS13010	SM00387	Histidine kinase-like ATPases
CEJ46_RS13010	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS13010	SM00448	cheY-homologous receiver domain
CEJ46_RS13025	SM00479	CEJ46_RS13025
CEJ46_RS13045	SM00878	Biotin carboxylase C-terminal domain
CEJ46_RS13065	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS13065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS13065	SM01049	CEJ46_RS13065
CEJ46_RS13070	SM00422	helix_turn_helix, mercury resistance
CEJ46_RS13075	SM00798	AICARFT/IMPCHase bienzyme
CEJ46_RS13075	SM00851	MGS-like domain
CEJ46_RS13080	SM01209	CEJ46_RS13080
CEJ46_RS13080	SM01210	CEJ46_RS13080
CEJ46_RS13090	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_RS13125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS13125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS13130	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS13130	SM01027	Beta-Casp domain
CEJ46_RS13150	SM00984	UDP binding domain
CEJ46_RS13185	SM00226	Low molecular weight phosphatase family
CEJ46_RS13310	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_RS13350	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS13460	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CEJ46_RS13460	SM01232	CEJ46_RS13460
CEJ46_RS13530	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS13570	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS13580	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS13610	SM00341	Helicase and RNase D C-terminal
CEJ46_RS13610	SM00487	DEAD-like helicases superfamily
CEJ46_RS13610	SM00490	helicase superfamily c-terminal domain
CEJ46_RS13610	SM00956	CEJ46_RS13610
CEJ46_RS13625	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS13675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS13675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS13685	SM00448	cheY-homologous receiver domain
CEJ46_RS13715	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS13785	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_RS13815	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CEJ46_RS13815	SM00474	3'-5' exonuclease
CEJ46_RS13815	SM00475	5'-3' exonuclease
CEJ46_RS13815	SM00482	DNA polymerase A domain
CEJ46_RS13820	SM01004	Delta-aminolevulinic acid dehydratase
CEJ46_RS13870	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS13885	SM01007	Class II Aldolase and Adducin N-terminal domain
CEJ46_RS13905	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS13945	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS13990	SM00020	Trypsin-like serine protease
CEJ46_RS14005	SM01119	CEJ46_RS14005
CEJ46_RS14045	SM00487	DEAD-like helicases superfamily
CEJ46_RS14055	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS14095	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14150	SM00344	helix_turn_helix ASNC type
CEJ46_RS14175	SM00876	Biotin and Thiamin Synthesis associated domain
CEJ46_RS14330	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14370	SM00470	ParB-like nuclease domain
CEJ46_RS14385	SM01228	CEJ46_RS14385
CEJ46_RS14475	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS14490	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS14490	SM00478	endonuclease III
CEJ46_RS14490	SM01009	AlkA N-terminal domain
CEJ46_RS14580	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS14595	SM00450	Rhodanese Homology Domain
CEJ46_RS14605	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14620	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS14645	SM00866	CEJ46_RS14645
CEJ46_RS14650	SM00487	DEAD-like helicases superfamily
CEJ46_RS14650	SM00490	helicase superfamily c-terminal domain
CEJ46_RS14685	SM00829	Enoylreductase
CEJ46_RS14705	SM00448	cheY-homologous receiver domain
CEJ46_RS14705	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS14710	SM00387	Histidine kinase-like ATPases
CEJ46_RS14770	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14770	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_RS14775	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14860	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CEJ46_RS14860	SM00495	Chitin-binding domain type 3
CEJ46_RS14860	SM00636	CEJ46_RS14860
CEJ46_RS14865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS14870	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS14880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS14900	SM00014	Acid phosphatase homologues
CEJ46_RS14910	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS14920	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CEJ46_RS14920	SM00267	diguanylate cyclase
CEJ46_RS14935	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CEJ46_RS14945	SM01007	Class II Aldolase and Adducin N-terminal domain
CEJ46_RS14960	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_RS14960	SM01134	CEJ46_RS14960
CEJ46_RS14970	SM00642	Alpha-amylase domain
CEJ46_RS14985	SM00642	Alpha-amylase domain
CEJ46_RS14990	SM00671	Sel1-like repeats.
CEJ46_RS15055	SM00267	diguanylate cyclase
CEJ46_RS15060	SM00028	Tetratricopeptide repeats
CEJ46_RS15080	SM00422	helix_turn_helix, mercury resistance
CEJ46_RS15090	SM00257	Lysin motif
CEJ46_RS15100	SM00487	DEAD-like helicases superfamily
CEJ46_RS15100	SM00490	helicase superfamily c-terminal domain
CEJ46_RS15150	SM00642	Alpha-amylase domain
CEJ46_RS15165	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS15190	SM00448	cheY-homologous receiver domain
CEJ46_RS15190	SM00850	LytTr DNA-binding domain
CEJ46_RS15195	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS15215	SM00448	cheY-homologous receiver domain
CEJ46_RS15215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS15220	SM00073	Histidine Phosphotransfer domain
CEJ46_RS15220	SM00091	PAS domain
CEJ46_RS15220	SM00387	Histidine kinase-like ATPases
CEJ46_RS15220	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS15220	SM00448	cheY-homologous receiver domain
CEJ46_RS15225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS15225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS15255	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_RS15260	SM00387	Histidine kinase-like ATPases
CEJ46_RS15260	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS15260	SM00448	cheY-homologous receiver domain
CEJ46_RS15305	SM01266	CEJ46_RS15305
CEJ46_RS15360	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS15365	SM00448	cheY-homologous receiver domain
CEJ46_RS15370	SM00387	Histidine kinase-like ATPases
CEJ46_RS15400	SM00344	helix_turn_helix ASNC type
CEJ46_RS15410	SM00458	Ricin-type beta-trefoil
CEJ46_RS15425	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CEJ46_RS15465	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS15580	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS15590	SM00020	Trypsin-like serine protease
CEJ46_RS15595	SM00020	Trypsin-like serine protease
CEJ46_RS15630	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS15645	SM00387	Histidine kinase-like ATPases
CEJ46_RS15645	SM00448	cheY-homologous receiver domain
CEJ46_RS15670	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS15760	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_RS15760	SM01134	CEJ46_RS15760
CEJ46_RS15780	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS15815	SM00642	Alpha-amylase domain
CEJ46_RS15860	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CEJ46_RS15875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS15875	SM00387	Histidine kinase-like ATPases
CEJ46_RS15880	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS15880	SM00448	cheY-homologous receiver domain
CEJ46_RS15920	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_RS15920	SM00357	Cold shock protein domain
CEJ46_RS15920	SM00955	CEJ46_RS15920
CEJ46_RS15925	SM00487	DEAD-like helicases superfamily
CEJ46_RS15925	SM00490	helicase superfamily c-terminal domain
CEJ46_RS15930	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CEJ46_RS16340	SM00360	RNA recognition motif
CEJ46_RS16345	SM01022	CEJ46_RS16345
CEJ46_RS16570	SM01022	CEJ46_RS16570
CEJ46_RS16610	SM01022	CEJ46_RS16610
CEJ46_RS16715	SM00507	HNH nucleases
CEJ46_RS16985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS16990	SM00506	Appr-1"-p processing enzyme
CEJ46_RS17040	SM01022	CEJ46_RS17040
CEJ46_RS17140	SM00881	CoA binding domain
CEJ46_RS17190	SM00448	cheY-homologous receiver domain
CEJ46_RS17190	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS17195	SM00387	Histidine kinase-like ATPases
CEJ46_RS17195	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS17205	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CEJ46_RS17205	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CEJ46_RS17220	SM00267	diguanylate cyclase
CEJ46_RS17225	SM00357	Cold shock protein domain
CEJ46_RS17235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS17235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS17265	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS17290	SM00782	PhnA Zinc-Ribbon
CEJ46_RS17325	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS17345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS17345	SM00866	CEJ46_RS17345
CEJ46_RS17395	SM00852	Probable molybdopterin binding domain
CEJ46_RS17405	SM00450	Rhodanese Homology Domain
CEJ46_RS17410	SM00636	CEJ46_RS17410
CEJ46_RS17425	SM00861	Transketolase, pyrimidine binding domain
CEJ46_RS17450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS17455	SM00867	YceI-like domain 
CEJ46_RS17470	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS17475	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS17525	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS17525	SM00267	diguanylate cyclase
CEJ46_RS17555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_RS17565	SM00450	Rhodanese Homology Domain
CEJ46_RS17570	SM00448	cheY-homologous receiver domain
CEJ46_RS17575	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS17575	SM00267	diguanylate cyclase
CEJ46_RS17575	SM00448	cheY-homologous receiver domain
CEJ46_RS17580	SM00387	Histidine kinase-like ATPases
CEJ46_RS17580	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS17585	SM00387	Histidine kinase-like ATPases
CEJ46_RS17595	SM00448	cheY-homologous receiver domain
CEJ46_RS17600	SM00448	cheY-homologous receiver domain
CEJ46_RS17610	SM00267	diguanylate cyclase
CEJ46_RS17620	SM00448	cheY-homologous receiver domain
CEJ46_RS17630	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS17660	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CEJ46_RS17660	SM00267	diguanylate cyclase
CEJ46_RS17670	SM00495	Chitin-binding domain type 3
CEJ46_RS17670	SM00636	CEJ46_RS17670
CEJ46_RS17675	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS17695	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS17715	SM00073	Histidine Phosphotransfer domain
CEJ46_RS17715	SM00387	Histidine kinase-like ATPases
CEJ46_RS17715	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS17715	SM00448	cheY-homologous receiver domain
CEJ46_RS17725	SM00851	MGS-like domain
CEJ46_RS17765	SM00387	Histidine kinase-like ATPases
CEJ46_RS17765	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS17765	SM00448	cheY-homologous receiver domain
CEJ46_RS17915	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS17950	SM00327	von Willebrand factor (vWF) type A domain
CEJ46_RS17955	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS17975	SM00487	DEAD-like helicases superfamily
CEJ46_RS17975	SM00490	helicase superfamily c-terminal domain
CEJ46_RS17985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS18000	SM00796	Allophanate hydrolase subunit 1
CEJ46_RS18005	SM00797	Allophanate hydrolase subunit 2
CEJ46_RS18020	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18035	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS18035	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CEJ46_RS18035	SM00267	diguanylate cyclase
CEJ46_RS18045	SM00271	DnaJ molecular chaperone homology domain
CEJ46_RS18065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS18095	SM00248	ankyrin repeats
CEJ46_RS18095	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS18095	SM00670	Large family of predicted nucleotide-binding domains
CEJ46_RS18120	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS18120	SM00267	diguanylate cyclase
CEJ46_RS18125	SM01057	Eukaryotic-type carbonic anhydrase
CEJ46_RS18135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS18135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS18150	SM00028	Tetratricopeptide repeats
CEJ46_RS18155	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_RS18155	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18170	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_RS18245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS18245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS18250	SM00642	Alpha-amylase domain
CEJ46_RS18265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS18265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS18285	SM00327	von Willebrand factor (vWF) type A domain
CEJ46_RS18290	SM00028	Tetratricopeptide repeats
CEJ46_RS18305	SM00267	diguanylate cyclase
CEJ46_RS18315	SM00507	HNH nucleases
CEJ46_RS18350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS18385	SM00829	Enoylreductase
CEJ46_RS18415	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS18415	SM00448	cheY-homologous receiver domain
CEJ46_RS18420	SM00387	Histidine kinase-like ATPases
CEJ46_RS18435	SM00481	DNA polymerase alpha chain like domain
CEJ46_RS18440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_RS18460	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_RS18465	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_RS18475	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_RS18495	SM00387	Histidine kinase-like ATPases
CEJ46_RS18495	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS18495	SM00448	cheY-homologous receiver domain
CEJ46_RS18505	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS18510	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS18525	SM00823	Phosphopantetheine attachment site
CEJ46_RS18530	SM00822	CEJ46_RS18530
CEJ46_RS18530	SM00823	Phosphopantetheine attachment site
CEJ46_RS18530	SM00825	Beta-ketoacyl synthase
CEJ46_RS18530	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CEJ46_RS18555	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18560	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18600	SM00448	cheY-homologous receiver domain
CEJ46_RS18600	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_RS18605	SM00387	Histidine kinase-like ATPases
CEJ46_RS18605	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_RS18610	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS18645	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18660	SM01119	CEJ46_RS18660
CEJ46_RS18675	SM00020	Trypsin-like serine protease
CEJ46_RS18720	SM00487	DEAD-like helicases superfamily
CEJ46_RS18720	SM00490	helicase superfamily c-terminal domain
CEJ46_RS18740	SM00487	DEAD-like helicases superfamily
CEJ46_RS18745	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18770	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS18810	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS18820	SM00487	DEAD-like helicases superfamily
CEJ46_RS18830	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18845	SM01240	CEJ46_RS18845
CEJ46_RS18860	SM00448	cheY-homologous receiver domain
CEJ46_RS18875	SM00357	Cold shock protein domain
CEJ46_RS18880	SM01322	CEJ46_RS18880
CEJ46_RS18890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CEJ46_RS18890	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS18940	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS18950	SM00091	PAS domain
CEJ46_RS18950	SM00267	diguanylate cyclase
CEJ46_RS18955	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_RS18955	SM01134	CEJ46_RS18955
CEJ46_RS18960	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS19000	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS19005	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS19015	SM00260	Two component signalling adaptor domain
CEJ46_RS19015	SM00448	cheY-homologous receiver domain
CEJ46_RS19025	SM00267	diguanylate cyclase
CEJ46_RS19035	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_RS19040	SM00267	diguanylate cyclase
CEJ46_RS19040	SM01079	CEJ46_RS19040
CEJ46_RS19060	SM00267	diguanylate cyclase
CEJ46_RS19075	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS19095	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS19105	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_RS19105	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CEJ46_RS19170	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS19170	SM00267	diguanylate cyclase
CEJ46_RS19200	SM00267	diguanylate cyclase
CEJ46_RS19205	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS19230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_RS19245	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CEJ46_RS19265	SM00495	Chitin-binding domain type 3
CEJ46_RS19295	SM00822	CEJ46_RS19295
CEJ46_RS19300	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS19310	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS19335	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS19370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS19380	SM01321	CEJ46_RS19380
CEJ46_RS19385	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS19395	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS19415	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS19435	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS19445	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS19445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS19470	SM01350	CEJ46_RS19470
CEJ46_RS19475	SM00849	Metallo-beta-lactamase superfamily
CEJ46_RS19485	SM00354	helix_turn _helix lactose operon repressor
CEJ46_RS19505	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS19535	SM00642	Alpha-amylase domain
CEJ46_RS19550	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS19560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS19560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS19560	SM01049	CEJ46_RS19560
CEJ46_RS19570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS19590	SM00344	helix_turn_helix ASNC type
CEJ46_RS19595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS19595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS19620	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_RS19635	SM00421	helix_turn_helix, Lux Regulon
CEJ46_RS19655	SM00052	Putative diguanylate phosphodiesterase
CEJ46_RS19655	SM00267	diguanylate cyclase
CEJ46_RS19660	SM00382	ATPases associated with a variety of cellular activities
CEJ46_RS19670	SM00331	Sigma factor PP2C-like phosphatases
CEJ46_RS19670	SM00448	cheY-homologous receiver domain
CEJ46_RS19680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS19685	SM00448	cheY-homologous receiver domain
CEJ46_RS19695	SM00138	Methyltransferase, chemotaxis proteins 
CEJ46_RS19700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_RS19700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_RS19705	SM00260	Two component signalling adaptor domain
CEJ46_RS19710	SM00260	Two component signalling adaptor domain
CEJ46_RS19715	SM00073	Histidine Phosphotransfer domain
CEJ46_RS19715	SM00260	Two component signalling adaptor domain
CEJ46_RS19715	SM00387	Histidine kinase-like ATPases
CEJ46_RS19715	SM01231	CEJ46_RS19715
CEJ46_RS19720	SM00448	cheY-homologous receiver domain
CEJ46_RS19740	SM00470	ParB-like nuclease domain
