A6A12_RS00005	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6A12_RS00010	SM00480	DNA polymerase III beta subunit
A6A12_RS00020	SM00387	Histidine kinase-like ATPases
A6A12_RS00020	SM00433	TopoisomeraseII
A6A12_RS00080	SM00829	Enoylreductase
A6A12_RS00270	SM00257	Lysin motif
A6A12_RS00295	SM01001	AIR carboxylase
A6A12_RS00380	SM01219	A6A12_RS00380
A6A12_RS00415	SM01144	A6A12_RS00415
A6A12_RS00440	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS00540	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS00540	SM00962	SRP54-type protein, GTPase domain
A6A12_RS00540	SM00963	SRP54-type protein, helical bundle domain
A6A12_RS00545	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS00560	SM00450	Rhodanese Homology Domain
A6A12_RS00585	SM00563	Phosphate acyltransferases
A6A12_RS00625	SM01038	Beta galactosidase small chain
A6A12_RS00660	SM00857	Resolvase, N terminal domain
A6A12_RS00710	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS00750	SM00360	RNA recognition motif
A6A12_RS00790	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS00790	SM00267	diguanylate cyclase
A6A12_RS00790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS00795	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS00795	SM00448	cheY-homologous receiver domain
A6A12_RS00800	SM00091	PAS domain
A6A12_RS00800	SM00387	Histidine kinase-like ATPases
A6A12_RS00800	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS00810	SM01230	A6A12_RS00810
A6A12_RS00850	SM00363	S4 RNA-binding domain
A6A12_RS00865	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS00945	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS00945	SM00732	Likely ribonuclease with RNase H fold.
A6A12_RS00990	SM00495	Chitin-binding domain type 3
A6A12_RS00995	SM00448	cheY-homologous receiver domain
A6A12_RS00995	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS01000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS01000	SM00387	Histidine kinase-like ATPases
A6A12_RS01000	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS01010	SM00487	DEAD-like helicases superfamily
A6A12_RS01010	SM00490	helicase superfamily c-terminal domain
A6A12_RS01015	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6A12_RS01015	SM00954	Region found in RelA / SpoT proteins
A6A12_RS01020	SM01409	A6A12_RS01020
A6A12_RS01025	SM00072	Guanylate kinase homologues.
A6A12_RS01040	SM00487	DEAD-like helicases superfamily
A6A12_RS01040	SM00490	helicase superfamily c-terminal domain
A6A12_RS01050	SM00357	Cold shock protein domain
A6A12_RS01050	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS01050	SM00959	Rho termination factor, N-terminal domain
A6A12_RS01105	SM00155	Phospholipase D. Active site motifs.
A6A12_RS01160	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6A12_RS01160	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6A12_RS01165	SM00649	Ribosomal protein L11/L12
A6A12_RS01190	SM00663	RNA polymerase I subunit A N-terminus
A6A12_RS01235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS01235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS01255	SM00479	A6A12_RS01255
A6A12_RS01285	SM00257	Lysin motif
A6A12_RS01285	SM00646	A6A12_RS01285
A6A12_RS01290	SM00853	MutL C terminal dimerisation domain
A6A12_RS01290	SM01340	A6A12_RS01290
A6A12_RS01310	SM00244	prohibitin homologues
A6A12_RS01315	SM00244	prohibitin homologues
A6A12_RS01330	SM00320	WD40 repeats
A6A12_RS01370	SM00838	Elongation factor G C-terminus
A6A12_RS01370	SM00889	Elongation factor G, domain IV
A6A12_RS01405	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS01410	SM01005	Alanine racemase, C-terminal domain
A6A12_RS01515	SM01018	B12 binding domain
A6A12_RS01540	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS01540	SM00924	MgtE intracellular N domain
A6A12_RS01560	SM00421	helix_turn_helix, Lux Regulon
A6A12_RS01570	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS01570	SM00267	diguanylate cyclase
A6A12_RS01590	SM00965	Secretin and TonB N terminus short domain
A6A12_RS01600	SM00028	Tetratricopeptide repeats
A6A12_RS01605	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS01650	SM00560	LamG-like jellyroll fold domain
A6A12_RS01675	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS01800	SM00650	Ribosomal RNA adenine dimethylases
A6A12_RS01820	SM00271	DnaJ molecular chaperone homology domain
A6A12_RS01880	SM00478	endonuclease III
A6A12_RS01880	SM00525	A6A12_RS01880
A6A12_RS01895	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS01910	SM01152	A6A12_RS01910
A6A12_RS01940	SM00732	Likely ribonuclease with RNase H fold.
A6A12_RS01965	SM00731	SprT homologues.
A6A12_RS01975	SM00861	Transketolase, pyrimidine binding domain
A6A12_RS01990	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6A12_RS02030	SM00267	diguanylate cyclase
A6A12_RS02040	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6A12_RS02040	SM01134	A6A12_RS02040
A6A12_RS02050	SM00635	Bacterial Ig-like domain 2
A6A12_RS02055	SM00563	Phosphate acyltransferases
A6A12_RS02095	SM00886	Stress responsive A/B Barrel Domain
A6A12_RS02120	SM00482	DNA polymerase A domain
A6A12_RS02150	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS02220	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02240	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS02260	SM00857	Resolvase, N terminal domain
A6A12_RS02320	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS02335	SM00400	zinc finger
A6A12_RS02335	SM00493	A6A12_RS02335
A6A12_RS02335	SM00766	DNA primase DnaG DnaB-binding
A6A12_RS02360	SM01207	A6A12_RS02360
A6A12_RS02365	SM00905	Dihydroneopterin aldolase
A6A12_RS02410	SM00257	Lysin motif
A6A12_RS02420	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6A12_RS02420	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6A12_RS02445	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02455	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02465	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6A12_RS02520	SM00829	Enoylreductase
A6A12_RS02545	SM01091	Transporter associated domain
A6A12_RS02555	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02555	SM00962	SRP54-type protein, GTPase domain
A6A12_RS02555	SM00963	SRP54-type protein, helical bundle domain
A6A12_RS02620	SM00644	A6A12_RS02620
A6A12_RS02645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6A12_RS02645	SM00895	A6A12_RS02645
A6A12_RS02675	SM00947	Carbonic anhydrase
A6A12_RS02685	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02735	SM00487	DEAD-like helicases superfamily
A6A12_RS02735	SM00490	helicase superfamily c-terminal domain
A6A12_RS02735	SM00847	Helicase associated domain (HA2)  Add an annotation
A6A12_RS02775	SM00938	Nitrogen regulatory protein P-II
A6A12_RS02795	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02805	SM01068	Putative carbohydrate binding domain
A6A12_RS02825	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02830	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02850	SM00091	PAS domain
A6A12_RS02850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS02850	SM00387	Histidine kinase-like ATPases
A6A12_RS02850	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS02850	SM00448	cheY-homologous receiver domain
A6A12_RS02920	SM01103	A6A12_RS02920
A6A12_RS02930	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS02965	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS02965	SM00322	K homology RNA-binding domain
A6A12_RS02985	SM01387	A6A12_RS02985
A6A12_RS02990	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS02990	SM00322	K homology RNA-binding domain
A6A12_RS02995	SM00028	Tetratricopeptide repeats
A6A12_RS03000	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6A12_RS03020	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS03020	SM00091	PAS domain
A6A12_RS03020	SM00267	diguanylate cyclase
A6A12_RS03045	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS03045	SM00267	diguanylate cyclase
A6A12_RS03055	SM00487	DEAD-like helicases superfamily
A6A12_RS03055	SM00490	helicase superfamily c-terminal domain
A6A12_RS03080	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS03095	SM00927	DNA mismatch repair enzyme MutH
A6A12_RS03105	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6A12_RS03175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6A12_RS03190	SM00904	Riboflavin kinase
A6A12_RS03245	SM00448	cheY-homologous receiver domain
A6A12_RS03245	SM00850	LytTr DNA-binding domain
A6A12_RS03260	SM00830	Chorismate mutase type II
A6A12_RS03270	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS03290	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS03290	SM00267	diguanylate cyclase
A6A12_RS03300	SM00830	Chorismate mutase type II
A6A12_RS03315	SM00363	S4 RNA-binding domain
A6A12_RS03325	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS03325	SM01086	C-terminal, D2-small domain, of ClpB protein
A6A12_RS03385	SM00448	cheY-homologous receiver domain
A6A12_RS03385	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS03390	SM00091	PAS domain
A6A12_RS03390	SM00387	Histidine kinase-like ATPases
A6A12_RS03390	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS03420	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS03455	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS03470	SM01323	A6A12_RS03470
A6A12_RS03515	SM00271	DnaJ molecular chaperone homology domain
A6A12_RS03540	SM00562	A6A12_RS03540
A6A12_RS03570	SM00564	beta-propeller repeat
A6A12_RS03575	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS03590	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS03590	SM01240	A6A12_RS03590
A6A12_RS03605	SM00495	Chitin-binding domain type 3
A6A12_RS03760	SM00257	Lysin motif
A6A12_RS03825	SM00487	DEAD-like helicases superfamily
A6A12_RS03835	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS03905	SM00271	DnaJ molecular chaperone homology domain
A6A12_RS03945	SM00829	Enoylreductase
A6A12_RS03960	SM00062	Bacterial periplasmic substrate-binding proteins
A6A12_RS03970	SM01211	A6A12_RS03970
A6A12_RS04050	SM00861	Transketolase, pyrimidine binding domain
A6A12_RS04075	SM00981	A6A12_RS04075
A6A12_RS04095	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6A12_RS04095	SM00475	5'-3' exonuclease
A6A12_RS04105	SM00267	diguanylate cyclase
A6A12_RS04110	SM00028	Tetratricopeptide repeats
A6A12_RS04140	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS04140	SM00930	A6A12_RS04140
A6A12_RS04155	SM00354	helix_turn _helix lactose operon repressor
A6A12_RS04165	SM00642	Alpha-amylase domain
A6A12_RS04170	SM00448	cheY-homologous receiver domain
A6A12_RS04170	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS04175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS04175	SM00387	Histidine kinase-like ATPases
A6A12_RS04175	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS04210	SM00226	Low molecular weight phosphatase family
A6A12_RS04220	SM00984	UDP binding domain
A6A12_RS04225	SM00984	UDP binding domain
A6A12_RS04335	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS04350	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6A12_RS04405	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS04405	SM01091	Transporter associated domain
A6A12_RS04420	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS04455	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A6A12_RS04460	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6A12_RS04460	SM00292	breast cancer carboxy-terminal domain
A6A12_RS04460	SM00532	Ligase N family
A6A12_RS04480	SM00422	helix_turn_helix, mercury resistance
A6A12_RS04490	SM00244	prohibitin homologues
A6A12_RS04520	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS04525	SM00387	Histidine kinase-like ATPases
A6A12_RS04545	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6A12_RS04620	SM00479	A6A12_RS04620
A6A12_RS04635	SM00478	endonuclease III
A6A12_RS04635	SM00525	A6A12_RS04635
A6A12_RS04645	SM00900	A6A12_RS04645
A6A12_RS04685	SM00923	MbtH-like protein
A6A12_RS04745	SM00487	DEAD-like helicases superfamily
A6A12_RS04745	SM00490	helicase superfamily c-terminal domain
A6A12_RS04750	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS04750	SM00448	cheY-homologous receiver domain
A6A12_RS04765	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS04770	SM00852	Probable molybdopterin binding domain
A6A12_RS04790	SM00267	diguanylate cyclase
A6A12_RS04795	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS04890	SM00448	cheY-homologous receiver domain
A6A12_RS04910	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS04920	SM00493	A6A12_RS04920
A6A12_RS04955	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6A12_RS04975	SM00870	A6A12_RS04975
A6A12_RS05000	SM00487	DEAD-like helicases superfamily
A6A12_RS05000	SM00491	A6A12_RS05000
A6A12_RS05030	SM00474	3'-5' exonuclease
A6A12_RS05070	SM00495	Chitin-binding domain type 3
A6A12_RS05070	SM00636	A6A12_RS05070
A6A12_RS05110	SM00642	Alpha-amylase domain
A6A12_RS05115	SM00487	DEAD-like helicases superfamily
A6A12_RS05115	SM00490	helicase superfamily c-terminal domain
A6A12_RS05135	SM00448	cheY-homologous receiver domain
A6A12_RS05135	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS05140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS05140	SM00387	Histidine kinase-like ATPases
A6A12_RS05170	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05170	SM00448	cheY-homologous receiver domain
A6A12_RS05175	SM00387	Histidine kinase-like ATPases
A6A12_RS05175	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS05195	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05195	SM00994	ClpX C4-type zinc finger
A6A12_RS05195	SM01086	C-terminal, D2-small domain, of ClpB protein
A6A12_RS05200	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05200	SM00464	Found in ATP-dependent protease La (LON)
A6A12_RS05205	SM00411	bacterial (prokaryotic) histone like domain
A6A12_RS05225	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS05230	SM00411	bacterial (prokaryotic) histone like domain
A6A12_RS05240	SM00028	Tetratricopeptide repeats
A6A12_RS05245	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6A12_RS05265	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6A12_RS05265	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6A12_RS05270	SM00344	helix_turn_helix ASNC type
A6A12_RS05275	SM00843	A6A12_RS05275
A6A12_RS05330	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS05335	SM00020	Trypsin-like serine protease
A6A12_RS05340	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS05340	SM00091	PAS domain
A6A12_RS05435	SM00481	DNA polymerase alpha chain like domain
A6A12_RS05445	SM00363	S4 RNA-binding domain
A6A12_RS05450	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS05450	SM00267	diguanylate cyclase
A6A12_RS05475	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05480	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05490	SM00267	diguanylate cyclase
A6A12_RS05515	SM00919	Malic enzyme, NAD binding domain
A6A12_RS05515	SM01274	A6A12_RS05515
A6A12_RS05580	SM00448	cheY-homologous receiver domain
A6A12_RS05585	SM00387	Histidine kinase-like ATPases
A6A12_RS05625	SM00528	Domain in histone-like proteins of HNS family
A6A12_RS05685	SM00357	Cold shock protein domain
A6A12_RS05695	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05695	SM01086	C-terminal, D2-small domain, of ClpB protein
A6A12_RS05700	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS05725	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6A12_RS05725	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6A12_RS05725	SM00493	A6A12_RS05725
A6A12_RS05760	SM00354	helix_turn _helix lactose operon repressor
A6A12_RS05770	SM00448	cheY-homologous receiver domain
A6A12_RS05770	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS05895	SM01131	A6A12_RS05895
A6A12_RS05910	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05915	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05935	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS05965	SM00155	Phospholipase D. Active site motifs.
A6A12_RS05995	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06045	SM00487	DEAD-like helicases superfamily
A6A12_RS06045	SM00490	helicase superfamily c-terminal domain
A6A12_RS06065	SM00387	Histidine kinase-like ATPases
A6A12_RS06070	SM00448	cheY-homologous receiver domain
A6A12_RS06070	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS06080	SM00487	DEAD-like helicases superfamily
A6A12_RS06080	SM00490	helicase superfamily c-terminal domain
A6A12_RS06085	SM00363	S4 RNA-binding domain
A6A12_RS06110	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS06150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS06150	SM01049	A6A12_RS06150
A6A12_RS06165	SM00852	Probable molybdopterin binding domain
A6A12_RS06195	SM00434	DNA Topoisomerase IV
A6A12_RS06200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS06220	SM00764	Citrate lyase ligase C-terminal domain
A6A12_RS06245	SM00387	Histidine kinase-like ATPases
A6A12_RS06250	SM00448	cheY-homologous receiver domain
A6A12_RS06305	SM00342	helix_turn_helix, arabinose operon control protein
A6A12_RS06345	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS06370	SM00387	Histidine kinase-like ATPases
A6A12_RS06370	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS06375	SM00448	cheY-homologous receiver domain
A6A12_RS06375	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS06400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6A12_RS06400	SM00895	A6A12_RS06400
A6A12_RS06505	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06520	SM00062	Bacterial periplasmic substrate-binding proteins
A6A12_RS06560	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS06580	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06590	SM00945	ProQ/FINO family
A6A12_RS06595	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6A12_RS06595	SM00245	tail specific protease
A6A12_RS06630	SM00981	A6A12_RS06630
A6A12_RS06640	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06735	SM00100	Cyclic nucleotide-monophosphate binding domain
A6A12_RS06735	SM00419	helix_turn_helix, cAMP Regulatory protein
A6A12_RS06765	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06800	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06805	SM00421	helix_turn_helix, Lux Regulon
A6A12_RS06805	SM00448	cheY-homologous receiver domain
A6A12_RS06810	SM00387	Histidine kinase-like ATPases
A6A12_RS06830	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS06855	SM01144	A6A12_RS06855
A6A12_RS06865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS06935	SM00849	Metallo-beta-lactamase superfamily
A6A12_RS07030	SM00487	DEAD-like helicases superfamily
A6A12_RS07030	SM00490	helicase superfamily c-terminal domain
A6A12_RS07065	SM00857	Resolvase, N terminal domain
A6A12_RS07120	SM00479	A6A12_RS07120
A6A12_RS07125	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS07170	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS07170	SM00487	DEAD-like helicases superfamily
A6A12_RS07170	SM00490	helicase superfamily c-terminal domain
A6A12_RS07170	SM00847	Helicase associated domain (HA2)  Add an annotation
A6A12_RS07185	SM00479	A6A12_RS07185
A6A12_RS07240	SM00354	helix_turn _helix lactose operon repressor
A6A12_RS07250	SM00487	DEAD-like helicases superfamily
A6A12_RS07250	SM00490	helicase superfamily c-terminal domain
A6A12_RS07265	SM00357	Cold shock protein domain
A6A12_RS07275	SM00448	cheY-homologous receiver domain
A6A12_RS07280	SM00387	Histidine kinase-like ATPases
A6A12_RS07290	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS07290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS07295	SM01005	Alanine racemase, C-terminal domain
A6A12_RS07305	SM00267	diguanylate cyclase
A6A12_RS07320	SM00091	PAS domain
A6A12_RS07320	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS07380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS07380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS07395	SM00448	cheY-homologous receiver domain
A6A12_RS07405	SM00138	Methyltransferase, chemotaxis proteins 
A6A12_RS07410	SM00260	Two component signalling adaptor domain
A6A12_RS07415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS07415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS07420	SM00073	Histidine Phosphotransfer domain
A6A12_RS07420	SM00260	Two component signalling adaptor domain
A6A12_RS07420	SM00387	Histidine kinase-like ATPases
A6A12_RS07420	SM01231	A6A12_RS07420
A6A12_RS07430	SM00448	cheY-homologous receiver domain
A6A12_RS07435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS07440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6A12_RS07450	SM00100	Cyclic nucleotide-monophosphate binding domain
A6A12_RS07450	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS07455	SM00479	A6A12_RS07455
A6A12_RS07460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS07460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS07470	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6A12_RS07485	SM00849	Metallo-beta-lactamase superfamily
A6A12_RS07570	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS07575	SM00450	Rhodanese Homology Domain
A6A12_RS07580	SM00062	Bacterial periplasmic substrate-binding proteins
A6A12_RS07585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS07585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS07590	SM00640	Glycosyl hydrolases family 32
A6A12_RS07595	SM00354	helix_turn _helix lactose operon repressor
A6A12_RS07610	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS07620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS07620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS07705	SM00342	helix_turn_helix, arabinose operon control protein
A6A12_RS07715	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS07725	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS07745	SM00220	Serine/Threonine protein kinases, catalytic domain
A6A12_RS07770	SM00240	Forkhead associated domain
A6A12_RS07795	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS07795	SM01086	C-terminal, D2-small domain, of ClpB protein
A6A12_RS07875	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS07890	SM00267	diguanylate cyclase
A6A12_RS07900	SM00642	Alpha-amylase domain
A6A12_RS07905	SM00260	Two component signalling adaptor domain
A6A12_RS07905	SM00448	cheY-homologous receiver domain
A6A12_RS07910	SM00062	Bacterial periplasmic substrate-binding proteins
A6A12_RS07915	SM00448	cheY-homologous receiver domain
A6A12_RS07920	SM00387	Histidine kinase-like ATPases
A6A12_RS07960	SM00028	Tetratricopeptide repeats
A6A12_RS08005	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS08020	SM00855	Phosphoglycerate mutase family
A6A12_RS08055	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS08065	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS08070	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS08070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS08085	SM00479	A6A12_RS08085
A6A12_RS08105	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS08105	SM00267	diguanylate cyclase
A6A12_RS08115	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6A12_RS08115	SM00091	PAS domain
A6A12_RS08115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS08130	SM00411	bacterial (prokaryotic) histone like domain
A6A12_RS08135	SM00873	B3/4 domain
A6A12_RS08135	SM00874	tRNA synthetase B5 domain
A6A12_RS08135	SM00896	Ferredoxin-fold anticodon binding domain
A6A12_RS08180	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6A12_RS08180	SM00465	GIY-YIG type nucleases (URI domain)
A6A12_RS08185	SM00421	helix_turn_helix, Lux Regulon
A6A12_RS08185	SM00448	cheY-homologous receiver domain
A6A12_RS08190	SM00486	DNA polymerase type-B family
A6A12_RS08200	SM00841	Elongation factor P, C-terminal
A6A12_RS08200	SM01185	A6A12_RS08200
A6A12_RS08210	SM01022	A6A12_RS08210
A6A12_RS08215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6A12_RS08215	SM00866	A6A12_RS08215
A6A12_RS08265	SM00671	Sel1-like repeats.
A6A12_RS08310	SM00267	diguanylate cyclase
A6A12_RS08465	SM00507	HNH nucleases
A6A12_RS08590	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS08595	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS08750	SM00387	Histidine kinase-like ATPases
A6A12_RS08750	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS08750	SM00448	cheY-homologous receiver domain
A6A12_RS08780	SM00028	Tetratricopeptide repeats
A6A12_RS08835	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS08840	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6A12_RS08850	SM00840	A6A12_RS08850
A6A12_RS08865	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS08880	SM00491	A6A12_RS08880
A6A12_RS08900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS08900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS08920	SM00062	Bacterial periplasmic substrate-binding proteins
A6A12_RS08920	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6A12_RS08925	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS08950	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS08950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS08970	SM00763	PrkA AAA domain
A6A12_RS09005	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09010	SM00849	Metallo-beta-lactamase superfamily
A6A12_RS09025	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09040	SM00487	DEAD-like helicases superfamily
A6A12_RS09040	SM00490	helicase superfamily c-terminal domain
A6A12_RS09040	SM00982	A6A12_RS09040
A6A12_RS09040	SM01058	CarD-like/TRCF domain
A6A12_RS09090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS09090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS09100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6A12_RS09130	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS09130	SM00876	Biotin and Thiamin Synthesis associated domain
A6A12_RS09145	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09165	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09200	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09205	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09225	SM00052	Putative diguanylate phosphodiesterase
A6A12_RS09225	SM00421	helix_turn_helix, Lux Regulon
A6A12_RS09225	SM00448	cheY-homologous receiver domain
A6A12_RS09230	SM00062	Bacterial periplasmic substrate-binding proteins
A6A12_RS09230	SM00387	Histidine kinase-like ATPases
A6A12_RS09230	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS09230	SM00448	cheY-homologous receiver domain
A6A12_RS09320	SM00825	Beta-ketoacyl synthase
A6A12_RS09330	SM00822	A6A12_RS09330
A6A12_RS09335	SM00825	Beta-ketoacyl synthase
A6A12_RS09375	SM00354	helix_turn _helix lactose operon repressor
A6A12_RS09390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS09390	SM00387	Histidine kinase-like ATPases
A6A12_RS09390	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS09395	SM00448	cheY-homologous receiver domain
A6A12_RS09395	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS09410	SM00344	helix_turn_helix ASNC type
A6A12_RS09420	SM00387	Histidine kinase-like ATPases
A6A12_RS09420	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS09425	SM00448	cheY-homologous receiver domain
A6A12_RS09425	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS09440	SM01236	A6A12_RS09440
A6A12_RS09470	SM00062	Bacterial periplasmic substrate-binding proteins
A6A12_RS09470	SM00267	diguanylate cyclase
A6A12_RS09495	SM00344	helix_turn_helix ASNC type
A6A12_RS09505	SM00978	A6A12_RS09505
A6A12_RS09515	SM00563	Phosphate acyltransferases
A6A12_RS09540	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A6A12_RS09575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6A12_RS09580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6A12_RS09585	SM01144	A6A12_RS09585
A6A12_RS09605	SM00260	Two component signalling adaptor domain
A6A12_RS09605	SM00448	cheY-homologous receiver domain
A6A12_RS09675	SM00825	Beta-ketoacyl synthase
A6A12_RS09685	SM00822	A6A12_RS09685
A6A12_RS09690	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6A12_RS09720	SM00363	S4 RNA-binding domain
A6A12_RS09725	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS09745	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6A12_RS09800	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6A12_RS09800	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6A12_RS09800	SM00493	A6A12_RS09800
A6A12_RS09870	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09880	SM00260	Two component signalling adaptor domain
A6A12_RS09885	SM00260	Two component signalling adaptor domain
A6A12_RS09895	SM00448	cheY-homologous receiver domain
A6A12_RS09900	SM00073	Histidine Phosphotransfer domain
A6A12_RS09900	SM00260	Two component signalling adaptor domain
A6A12_RS09900	SM00387	Histidine kinase-like ATPases
A6A12_RS09900	SM01231	A6A12_RS09900
A6A12_RS09910	SM00448	cheY-homologous receiver domain
A6A12_RS09925	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09925	SM00962	SRP54-type protein, GTPase domain
A6A12_RS09935	SM00855	Phosphoglycerate mutase family
A6A12_RS09950	SM00836	DALR anticodon binding domain
A6A12_RS09950	SM01016	Arginyl tRNA synthetase N terminal dom
A6A12_RS09970	SM00899	A6A12_RS09970
A6A12_RS09975	SM00342	helix_turn_helix, arabinose operon control protein
A6A12_RS09985	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS09995	SM00881	CoA binding domain
A6A12_RS10010	SM00861	Transketolase, pyrimidine binding domain
A6A12_RS10100	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6A12_RS10110	SM00825	Beta-ketoacyl synthase
A6A12_RS10150	SM00463	Small MutS-related domain
A6A12_RS10205	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS10230	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS10230	SM00448	cheY-homologous receiver domain
A6A12_RS10235	SM00091	PAS domain
A6A12_RS10235	SM00387	Histidine kinase-like ATPases
A6A12_RS10235	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS10240	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS10330	SM01130	A6A12_RS10330
A6A12_RS10370	SM00857	Resolvase, N terminal domain
A6A12_RS10445	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS10445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS10520	SM00937	A6A12_RS10520
A6A12_RS10540	SM01400	A6A12_RS10540
A6A12_RS10610	SM00047	Lysozyme subfamily 2
A6A12_RS10655	SM00138	Methyltransferase, chemotaxis proteins 
A6A12_RS10660	SM00260	Two component signalling adaptor domain
A6A12_RS10660	SM00448	cheY-homologous receiver domain
A6A12_RS10665	SM00858	A6A12_RS10665
A6A12_RS10725	SM01081	Putative carbohydrate binding domain
A6A12_RS10740	SM00363	S4 RNA-binding domain
A6A12_RS10780	SM00479	A6A12_RS10780
A6A12_RS10795	SM00849	Metallo-beta-lactamase superfamily
A6A12_RS10800	SM00257	Lysin motif
A6A12_RS10815	SM00938	Nitrogen regulatory protein P-II
A6A12_RS10825	SM00977	TilS substrate C-terminal domain
A6A12_RS10835	SM00481	DNA polymerase alpha chain like domain
A6A12_RS10865	SM00935	Outer membrane protein (OmpH-like)
A6A12_RS10875	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6A12_RS10920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6A12_RS10975	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A6A12_RS11065	SM00900	A6A12_RS11065
A6A12_RS11115	SM00464	Found in ATP-dependent protease La (LON)
A6A12_RS11150	SM00925	MltA specific insert domain
A6A12_RS11230	SM00354	helix_turn _helix lactose operon repressor
A6A12_RS11275	SM00838	Elongation factor G C-terminus
A6A12_RS11275	SM00889	Elongation factor G, domain IV
A6A12_RS11280	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS11310	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A6A12_RS11315	SM01133	A6A12_RS11315
A6A12_RS11350	SM00986	Uracil DNA glycosylase superfamily
A6A12_RS11350	SM00987	UreE urease accessory protein, C-terminal domain 
A6A12_RS11355	SM00518	AP endonuclease family 2
A6A12_RS11390	SM00448	cheY-homologous receiver domain
A6A12_RS11390	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS11400	SM00073	Histidine Phosphotransfer domain
A6A12_RS11400	SM00091	PAS domain
A6A12_RS11400	SM00387	Histidine kinase-like ATPases
A6A12_RS11400	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS11400	SM00448	cheY-homologous receiver domain
A6A12_RS11405	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS11470	SM00851	MGS-like domain
A6A12_RS11470	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6A12_RS11475	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6A12_RS11490	SM00957	SecA DEAD-like domain
A6A12_RS11490	SM00958	SecA preprotein cross-linking domain
A6A12_RS11505	SM00864	Tubulin/FtsZ family, GTPase domain
A6A12_RS11505	SM00865	Tubulin/FtsZ family, C-terminal domain
A6A12_RS11510	SM00842	Cell division protein FtsA
A6A12_RS11595	SM00749	bacterial OsmY and nodulation domain
A6A12_RS11650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6A12_RS11655	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6A12_RS11660	SM00434	DNA Topoisomerase IV
A6A12_RS11665	SM00387	Histidine kinase-like ATPases
A6A12_RS11665	SM00433	TopoisomeraseII
A6A12_RS11705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS11715	SM00880	A6A12_RS11715
A6A12_RS11715	SM01118	A6A12_RS11715
A6A12_RS11730	SM00287	Bacterial SH3 domain homologues
A6A12_RS11740	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS11750	SM01192	A6A12_RS11750
A6A12_RS11750	SM01193	A6A12_RS11750
A6A12_RS11765	SM00954	Region found in RelA / SpoT proteins
A6A12_RS11775	SM00073	Histidine Phosphotransfer domain
A6A12_RS11775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS11775	SM00387	Histidine kinase-like ATPases
A6A12_RS11775	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS11775	SM00448	cheY-homologous receiver domain
A6A12_RS11800	SM00358	Double-stranded RNA binding motif
A6A12_RS11800	SM00535	Ribonuclease III family
A6A12_RS11930	SM00014	Acid phosphatase homologues
A6A12_RS11935	SM00917	LeuA allosteric (dimerisation) domain
A6A12_RS11940	SM01329	A6A12_RS11940
A6A12_RS11990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6A12_RS12045	SM00487	DEAD-like helicases superfamily
A6A12_RS12045	SM00490	helicase superfamily c-terminal domain
A6A12_RS12055	SM00670	Large family of predicted nucleotide-binding domains
A6A12_RS12080	SM00989	A6A12_RS12080
A6A12_RS12085	SM00387	Histidine kinase-like ATPases
A6A12_RS12090	SM00563	Phosphate acyltransferases
A6A12_RS12125	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS12135	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS12155	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS12185	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6A12_RS12185	SM00924	MgtE intracellular N domain
A6A12_RS12200	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS12275	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS12350	SM00563	Phosphate acyltransferases
A6A12_RS12355	SM00487	DEAD-like helicases superfamily
A6A12_RS12355	SM00490	helicase superfamily c-terminal domain
A6A12_RS12380	SM00662	RNA polymerases D
A6A12_RS12385	SM00363	S4 RNA-binding domain
A6A12_RS12385	SM01390	A6A12_RS12385
A6A12_RS12450	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6A12_RS12455	SM01374	A6A12_RS12455
A6A12_RS12475	SM00322	K homology RNA-binding domain
A6A12_RS12490	SM01382	A6A12_RS12490
A6A12_RS12490	SM01383	A6A12_RS12490
A6A12_RS12510	SM01403	A6A12_RS12510
A6A12_RS12515	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6A12_RS12520	SM00316	Ribosomal protein S1-like RNA-binding domain
A6A12_RS12520	SM00357	Cold shock protein domain
A6A12_RS12520	SM00955	A6A12_RS12520
A6A12_RS12525	SM00671	Sel1-like repeats.
A6A12_RS12535	SM00788	Adenylosuccinate synthetase
A6A12_RS12565	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS12590	SM00100	Cyclic nucleotide-monophosphate binding domain
A6A12_RS12590	SM00419	helix_turn_helix, cAMP Regulatory protein
A6A12_RS12595	SM01150	A6A12_RS12595
A6A12_RS12685	SM00965	Secretin and TonB N terminus short domain
A6A12_RS12750	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6A12_RS12770	SM00971	Serine acetyltransferase, N-terminal
A6A12_RS12785	SM00450	Rhodanese Homology Domain
A6A12_RS12815	SM00841	Elongation factor P, C-terminal
A6A12_RS12815	SM01185	A6A12_RS12815
A6A12_RS12840	SM00883	Chaperonin 10 Kd subunit
A6A12_RS12885	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS12885	SM01086	C-terminal, D2-small domain, of ClpB protein
A6A12_RS12900	SM00354	helix_turn _helix lactose operon repressor
A6A12_RS12905	SM00487	DEAD-like helicases superfamily
A6A12_RS12905	SM00490	helicase superfamily c-terminal domain
A6A12_RS12915	SM00919	Malic enzyme, NAD binding domain
A6A12_RS12915	SM01274	A6A12_RS12915
A6A12_RS12965	SM00448	cheY-homologous receiver domain
A6A12_RS12965	SM00862	Transcriptional regulatory protein, C terminal
A6A12_RS12970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS12970	SM00387	Histidine kinase-like ATPases
A6A12_RS12970	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS12980	SM00357	Cold shock protein domain
A6A12_RS13045	SM00421	helix_turn_helix, Lux Regulon
A6A12_RS13045	SM00448	cheY-homologous receiver domain
A6A12_RS13050	SM01091	Transporter associated domain
A6A12_RS13065	SM00387	Histidine kinase-like ATPases
A6A12_RS13065	SM00388	His Kinase A (phosphoacceptor) domain
A6A12_RS13065	SM00448	cheY-homologous receiver domain
A6A12_RS13080	SM00479	A6A12_RS13080
A6A12_RS13100	SM00878	Biotin carboxylase C-terminal domain
A6A12_RS13125	SM00422	helix_turn_helix, mercury resistance
A6A12_RS13130	SM00798	AICARFT/IMPCHase bienzyme
A6A12_RS13130	SM00851	MGS-like domain
A6A12_RS13135	SM01209	A6A12_RS13135
A6A12_RS13135	SM01210	A6A12_RS13135
A6A12_RS13145	SM00411	bacterial (prokaryotic) histone like domain
A6A12_RS13175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6A12_RS13175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6A12_RS13180	SM00849	Metallo-beta-lactamase superfamily
A6A12_RS13180	SM01027	Beta-Casp domain
A6A12_RS13190	SM00984	UDP binding domain
A6A12_RS13240	SM00226	Low molecular weight phosphatase family
A6A12_RS13390	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS13500	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A6A12_RS13500	SM01232	A6A12_RS13500
A6A12_RS13690	SM00636	A6A12_RS13690
A6A12_RS13720	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS13730	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS13760	SM00341	Helicase and RNase D C-terminal
A6A12_RS13760	SM00487	DEAD-like helicases superfamily
A6A12_RS13760	SM00490	helicase superfamily c-terminal domain
A6A12_RS13760	SM00956	A6A12_RS13760
A6A12_RS13770	SM00342	helix_turn_helix, arabinose operon control protein
A6A12_RS13900	SM00487	DEAD-like helicases superfamily
A6A12_RS13910	SM00530	Helix-turn-helix XRE-family like proteins 
A6A12_RS13925	SM00448	cheY-homologous receiver domain
A6A12_RS13955	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS14025	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6A12_RS14055	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6A12_RS14055	SM00474	3'-5' exonuclease
A6A12_RS14055	SM00475	5'-3' exonuclease
A6A12_RS14055	SM00482	DNA polymerase A domain
A6A12_RS14060	SM01004	Delta-aminolevulinic acid dehydratase
A6A12_RS14115	SM00342	helix_turn_helix, arabinose operon control protein
A6A12_RS14130	SM01007	Class II Aldolase and Adducin N-terminal domain
A6A12_RS14145	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS14200	SM00344	helix_turn_helix ASNC type
A6A12_RS14230	SM00876	Biotin and Thiamin Synthesis associated domain
A6A12_RS14350	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS14390	SM00470	ParB-like nuclease domain
A6A12_RS14405	SM01228	A6A12_RS14405
A6A12_RS14425	SM01234	A6A12_RS14425
A6A12_RS14440	SM00382	ATPases associated with a variety of cellular activities
A6A12_RS14450	SM00062	Bacterial periplasmic substrate-binding proteins
