locus-tag class description VCA1004_RS00005 PF00258 Flavodoxin VCA1004_RS00010 PF01926 50S ribosome-binding GTPase VCA1004_RS00010 PF12631 MnmE helical domain VCA1004_RS00010 PF10396 GTP-binding protein TrmE N-terminus VCA1004_RS00015 PF14849 YidC periplasmic domain VCA1004_RS00015 PF02096 60Kd inner membrane protein VCA1004_RS00020 PF01809 Putative membrane protein insertion efficiency factor VCA1004_RS00025 PF00825 Ribonuclease P VCA1004_RS00030 PF00468 Ribosomal protein L34 VCA1004_RS00035 PF00005 ABC transporter VCA1004_RS00040 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS00045 PF00005 ABC transporter VCA1004_RS00045 PF06472 ABC transporter transmembrane region 2 VCA1004_RS00050 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS00055 PF11638 DnaA N-terminal domain VCA1004_RS00055 PF08299 Bacterial dnaA protein helix-turn-helix VCA1004_RS00055 PF00308 Bacterial dnaA protein VCA1004_RS00060 PF02768 DNA polymerase III beta subunit, C-terminal domain VCA1004_RS00060 PF02767 DNA polymerase III beta subunit, central domain VCA1004_RS00060 PF00712 DNA polymerase III beta subunit, N-terminal domain VCA1004_RS00065 PF02463 RecF/RecN/SMC N terminal domain VCA1004_RS00070 PF18053 DNA gyrase B subunit insert domain VCA1004_RS00070 PF00204 DNA gyrase B VCA1004_RS00070 PF00986 DNA gyrase B subunit, carboxyl terminus VCA1004_RS00070 PF01751 Toprim domain VCA1004_RS00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS00075 PF01610 Transposase VCA1004_RS00075 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VCA1004_RS00075 PF13542 Helix-turn-helix domain of transposase family ISL3 VCA1004_RS00080 PF00011 Hsp20/alpha crystallin family VCA1004_RS00095 PF00155 Aminotransferase class I and II VCA1004_RS00105 PF02092 Glycyl-tRNA synthetase beta subunit VCA1004_RS00105 PF05746 DALR anticodon binding domain VCA1004_RS00110 PF02091 Glycyl-tRNA synthetase alpha subunit VCA1004_RS00115 PF02659 Putative manganese efflux pump VCA1004_RS00125 PF01206 Sulfurtransferase TusA VCA1004_RS00130 PF01491 Frataxin-like domain VCA1004_RS00140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCA1004_RS00140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VCA1004_RS00145 PF01678 Diaminopimelate epimerase VCA1004_RS00155 PF00589 Phage integrase family VCA1004_RS00155 PF02899 Phage integrase, N-terminal SAM-like domain VCA1004_RS00160 PF13419 Haloacid dehalogenase-like hydrolase VCA1004_RS00170 PF03942 DTW domain VCA1004_RS00190 PF12146 Serine aminopeptidase, S33 VCA1004_RS00215 PF01914 MarC family integral membrane protein VCA1004_RS00230 PF00448 SRP54-type protein, GTPase domain VCA1004_RS00230 PF02881 SRP54-type protein, helical bundle domain VCA1004_RS00235 PF00005 ABC transporter VCA1004_RS00240 PF18075 FtsX extracellular domain VCA1004_RS00245 PF00140 Sigma-70 factor, region 1.2 VCA1004_RS00245 PF04542 Sigma-70 region 2 VCA1004_RS00245 PF04545 Sigma-70, region 4 VCA1004_RS00250 PF00581 Rhodanese-like domain VCA1004_RS00255 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VCA1004_RS00255 PF01694 Rhomboid family VCA1004_RS00260 PF04345 Chorismate lyase VCA1004_RS00265 PF01040 UbiA prenyltransferase family VCA1004_RS00270 PF01553 Acyltransferase VCA1004_RS00275 PF01726 LexA DNA binding domain VCA1004_RS00275 PF00717 Peptidase S24-like VCA1004_RS00285 PF01554 MatE VCA1004_RS00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS00290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCA1004_RS00295 PF00440 Bacterial regulatory proteins, tetR family VCA1004_RS00300 PF05958 tRNA (Uracil-5-)-methyltransferase VCA1004_RS00305 PF07715 TonB-dependent Receptor Plug Domain VCA1004_RS00305 PF00593 TonB dependent receptor VCA1004_RS00310 PF01177 Asp/Glu/Hydantoin racemase VCA1004_RS00350 PF07719 Tetratricopeptide repeat VCA1004_RS00350 PF07219 HemY protein N-terminus VCA1004_RS00355 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VCA1004_RS00360 PF02602 Uroporphyrinogen-III synthase HemD VCA1004_RS00365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VCA1004_RS00365 PF03900 Porphobilinogen deaminase, C-terminal domain VCA1004_RS00370 PF12633 Adenylate cyclase NT domain VCA1004_RS00370 PF01295 Adenylate cyclase, class-I VCA1004_RS00375 PF00108 Thiolase, N-terminal domain VCA1004_RS00375 PF02803 Thiolase, C-terminal domain VCA1004_RS00380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCA1004_RS00380 PF00378 Enoyl-CoA hydratase/isomerase VCA1004_RS00380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCA1004_RS00385 PF09186 Domain of unknown function (DUF1949) VCA1004_RS00385 PF01205 Uncharacterized protein family UPF0029 VCA1004_RS00390 PF02386 Cation transport protein VCA1004_RS00395 PF12724 Flavodoxin domain VCA1004_RS00420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VCA1004_RS00425 PF01964 Radical SAM ThiC family VCA1004_RS00425 PF13667 ThiC-associated domain VCA1004_RS00430 PF02581 Thiamine monophosphate synthase VCA1004_RS00435 PF00899 ThiF family VCA1004_RS00445 PF05690 Thiazole biosynthesis protein ThiG VCA1004_RS00450 PF04055 Radical SAM superfamily VCA1004_RS00450 PF06968 Biotin and Thiamin Synthesis associated domain VCA1004_RS00455 PF00557 Metallopeptidase family M24 VCA1004_RS00455 PF01321 Creatinase/Prolidase N-terminal domain VCA1004_RS00470 PF02646 RmuC family VCA1004_RS00475 PF01209 ubiE/COQ5 methyltransferase family VCA1004_RS00480 PF02036 SCP-2 sterol transfer family VCA1004_RS00485 PF03109 ABC1 family VCA1004_RS00490 PF02416 mttA/Hcf106 family VCA1004_RS00495 PF02416 mttA/Hcf106 family VCA1004_RS00500 PF00902 Sec-independent protein translocase protein (TatC) VCA1004_RS00505 PF01026 TatD related DNase VCA1004_RS00510 PF00490 Delta-aminolevulinic acid dehydratase VCA1004_RS00515 PF02541 Ppx/GppA phosphatase family VCA1004_RS00520 PF00271 Helicase conserved C-terminal domain VCA1004_RS00520 PF00270 DEAD/DEAH box helicase VCA1004_RS00525 PF00085 Thioredoxin VCA1004_RS00530 PF07497 Rho termination factor, RNA-binding domain VCA1004_RS00530 PF07498 Rho termination factor, N-terminal domain VCA1004_RS00530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCA1004_RS00540 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VCA1004_RS00545 PF00111 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS00550 PF00175 Oxidoreductase NAD-binding domain VCA1004_RS00630 PF03466 LysR substrate binding domain VCA1004_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS00635 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VCA1004_RS00635 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VCA1004_RS00640 PF13333 Integrase core domain VCA1004_RS00640 PF13276 HTH-like domain VCA1004_RS00640 PF00665 Integrase core domain VCA1004_RS00650 PF04380 Membrane fusogenic activity VCA1004_RS00655 PF00873 AcrB/AcrD/AcrF family VCA1004_RS00660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS00665 PF00440 Bacterial regulatory proteins, tetR family VCA1004_RS00670 PF13361 UvrD-like helicase C-terminal domain VCA1004_RS00670 PF00580 UvrD/REP helicase N-terminal domain VCA1004_RS00675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCA1004_RS00705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS00705 PF00005 ABC transporter VCA1004_RS00710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS00715 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS00720 PF12911 N-terminal TM domain of oligopeptide transport permease C VCA1004_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS00725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCA1004_RS00740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCA1004_RS00740 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS00745 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VCA1004_RS00750 PF01432 Peptidase family M3 VCA1004_RS00755 PF03466 LysR substrate binding domain VCA1004_RS00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS00760 PF01810 LysE type translocator VCA1004_RS00765 PF00463 Isocitrate lyase family VCA1004_RS00775 PF01274 Malate synthase VCA1004_RS00785 PF01037 Lrp/AsnC ligand binding domain VCA1004_RS00785 PF13404 AsnC-type helix-turn-helix domain VCA1004_RS00790 PF00563 EAL domain VCA1004_RS00790 PF08448 PAS fold VCA1004_RS00790 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS00795 PF04445 Putative SAM-dependent methyltransferase VCA1004_RS00800 PF18030 RimK PreATP-grasp domain VCA1004_RS00800 PF08443 RimK-like ATP-grasp domain VCA1004_RS00810 PF00892 EamA-like transporter family VCA1004_RS00815 PF00582 Universal stress protein family VCA1004_RS00820 PF00210 Ferritin-like domain VCA1004_RS00825 PF10625 Universal stress protein B (UspB) VCA1004_RS00835 PF00210 Ferritin-like domain VCA1004_RS00840 PF02863 Arginine repressor, C-terminal domain VCA1004_RS00840 PF01316 Arginine repressor, DNA binding domain VCA1004_RS00845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCA1004_RS00845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCA1004_RS00850 PF00696 Amino acid kinase family VCA1004_RS00860 PF03606 C4-dicarboxylate anaerobic carrier VCA1004_RS00865 PF00939 Sodium:sulfate symporter transmembrane region VCA1004_RS00875 PF13361 UvrD-like helicase C-terminal domain VCA1004_RS00875 PF00580 UvrD/REP helicase N-terminal domain VCA1004_RS00880 PF01545 Cation efflux family VCA1004_RS00880 PF16916 Dimerisation domain of Zinc Transporter VCA1004_RS00885 PF00365 Phosphofructokinase VCA1004_RS00890 PF00121 Triosephosphate isomerase VCA1004_RS00910 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VCA1004_RS00915 PF06005 Cell division protein ZapB VCA1004_RS00920 PF03737 Aldolase/RraA VCA1004_RS00925 PF01040 UbiA prenyltransferase family VCA1004_RS00930 PF10431 C-terminal, D2-small domain, of ClpB protein VCA1004_RS00930 PF07724 AAA domain (Cdc48 subfamily) VCA1004_RS00930 PF00004 ATPase family associated with various cellular activities (AAA) VCA1004_RS00935 PF00227 Proteasome subunit VCA1004_RS00960 PF00270 DEAD/DEAH box helicase VCA1004_RS00960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VCA1004_RS00960 PF00271 Helicase conserved C-terminal domain VCA1004_RS00960 PF18074 Primosomal protein N C-terminal domain VCA1004_RS00960 PF17764 3′ DNA-binding domain (3′BD) VCA1004_RS00965 PF01197 Ribosomal protein L31 VCA1004_RS00970 PF00390 Malic enzyme, N-terminal domain VCA1004_RS00970 PF03949 Malic enzyme, NAD binding domain VCA1004_RS00975 PF01340 Met Apo-repressor, MetJ VCA1004_RS00980 PF01053 Cys/Met metabolism PLP-dependent enzyme VCA1004_RS00985 PF00696 Amino acid kinase family VCA1004_RS00985 PF03447 Homoserine dehydrogenase, NAD binding domain VCA1004_RS00985 PF00742 Homoserine dehydrogenase VCA1004_RS00990 PF02219 Methylenetetrahydrofolate reductase VCA1004_RS00995 PF00311 Phosphoenolpyruvate carboxylase VCA1004_RS01000 PF07687 Peptidase dimerisation domain VCA1004_RS01000 PF01546 Peptidase family M20/M25/M40 VCA1004_RS01005 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCA1004_RS01005 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCA1004_RS01010 PF00696 Amino acid kinase family VCA1004_RS01015 PF00764 Arginosuccinate synthase VCA1004_RS01020 PF00583 Acetyltransferase (GNAT) family VCA1004_RS01020 PF00206 Lyase VCA1004_RS01020 PF14698 Argininosuccinate lyase C-terminal VCA1004_RS01025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS01025 PF03466 LysR substrate binding domain VCA1004_RS01030 PF17092 Penicillin-binding protein OB-like domain VCA1004_RS01030 PF00905 Penicillin binding protein transpeptidase domain VCA1004_RS01030 PF00912 Transglycosylase VCA1004_RS01040 PF05137 Fimbrial assembly protein (PilN) VCA1004_RS01055 PF00263 Bacterial type II and III secretion system protein VCA1004_RS01055 PF11741 AMIN domain VCA1004_RS01055 PF07660 Secretin and TonB N terminus short domain VCA1004_RS01055 PF03958 Bacterial type II/III secretion system short domain VCA1004_RS01060 PF01202 Shikimate kinase VCA1004_RS01065 PF01761 3-dehydroquinate synthase VCA1004_RS01075 PF02086 D12 class N6 adenine-specific DNA methyltransferase VCA1004_RS01085 PF00834 Ribulose-phosphate 3 epimerase family VCA1004_RS01090 PF13419 Haloacid dehalogenase-like hydrolase VCA1004_RS01095 PF00579 tRNA synthetases class I (W and Y) VCA1004_RS01100 PF00117 Glutamine amidotransferase class-I VCA1004_RS01105 PF00202 Aminotransferase class-III VCA1004_RS01115 PF13291 ACT domain VCA1004_RS01115 PF02824 TGS domain VCA1004_RS01115 PF04607 Region found in RelA / SpoT proteins VCA1004_RS01120 PF01192 RNA polymerase Rpb6 VCA1004_RS01125 PF00625 Guanylate kinase VCA1004_RS01130 PF02634 FdhD/NarQ family VCA1004_RS01135 PF00384 Molybdopterin oxidoreductase VCA1004_RS01150 PF00455 DeoR C terminal sensor domain VCA1004_RS01150 PF08220 DeoR-like helix-turn-helix domain VCA1004_RS01155 PF03611 PTS system sugar-specific permease component VCA1004_RS01160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS01165 PF00596 Class II Aldolase and Adducin N-terminal domain VCA1004_RS01175 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCA1004_RS01180 PF01261 Xylose isomerase-like TIM barrel VCA1004_RS01190 PF03755 YicC-like family, N-terminal region VCA1004_RS01190 PF08340 Domain of unknown function (DUF1732) VCA1004_RS01195 PF03725 3' exoribonuclease family, domain 2 VCA1004_RS01195 PF01138 3' exoribonuclease family, domain 1 VCA1004_RS01200 PF00156 Phosphoribosyl transferase domain VCA1004_RS01205 PF03222 Tryptophan/tyrosine permease family VCA1004_RS01215 PF13545 Crp-like helix-turn-helix domain VCA1004_RS01215 PF00027 Cyclic nucleotide-binding domain VCA1004_RS01220 PF00485 Phosphoribulokinase / Uridine kinase family VCA1004_RS01225 PF06794 Uncharacterised protein family (UPF0270) VCA1004_RS01235 PF12848 ABC transporter VCA1004_RS01235 PF00005 ABC transporter VCA1004_RS01240 PF02525 Flavodoxin-like fold VCA1004_RS01245 PF02254 TrkA-N domain VCA1004_RS01245 PF00999 Sodium/hydrogen exchanger family VCA1004_RS01250 PF09526 Probable metal-binding protein (DUF2387) VCA1004_RS01255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCA1004_RS01260 PF04102 SlyX VCA1004_RS01265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCA1004_RS01265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCA1004_RS01270 PF08348 YheO-like PAS domain VCA1004_RS01270 PF13309 HTH domain VCA1004_RS01275 PF02635 DsrE/DsrF-like family VCA1004_RS01280 PF02635 DsrE/DsrF-like family VCA1004_RS01290 PF00164 Ribosomal protein S12/S23 VCA1004_RS01295 PF00177 Ribosomal protein S7p/S5e VCA1004_RS01300 PF03144 Elongation factor Tu domain 2 VCA1004_RS01300 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS01300 PF00679 Elongation factor G C-terminus VCA1004_RS01300 PF14492 Elongation Factor G, domain II VCA1004_RS01300 PF03764 Elongation factor G, domain IV VCA1004_RS01305 PF03144 Elongation factor Tu domain 2 VCA1004_RS01305 PF03143 Elongation factor Tu C-terminal domain VCA1004_RS01305 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS01310 PF00338 Ribosomal protein S10p/S20e VCA1004_RS01315 PF00297 Ribosomal protein L3 VCA1004_RS01320 PF00573 Ribosomal protein L4/L1 family VCA1004_RS01325 PF00276 Ribosomal protein L23 VCA1004_RS01330 PF03947 Ribosomal Proteins L2, C-terminal domain VCA1004_RS01330 PF00181 Ribosomal Proteins L2, RNA binding domain VCA1004_RS01335 PF00203 Ribosomal protein S19 VCA1004_RS01340 PF00237 Ribosomal protein L22p/L17e VCA1004_RS01345 PF00189 Ribosomal protein S3, C-terminal domain VCA1004_RS01345 PF07650 KH domain VCA1004_RS01350 PF00252 Ribosomal protein L16p/L10e VCA1004_RS01355 PF00831 Ribosomal L29 protein VCA1004_RS01360 PF00366 Ribosomal protein S17 VCA1004_RS01365 PF00238 Ribosomal protein L14p/L23e VCA1004_RS01370 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VCA1004_RS01375 PF00281 Ribosomal protein L5 VCA1004_RS01375 PF00673 ribosomal L5P family C-terminus VCA1004_RS01380 PF00253 Ribosomal protein S14p/S29e VCA1004_RS01385 PF00410 Ribosomal protein S8 VCA1004_RS01390 PF00347 Ribosomal protein L6 VCA1004_RS01395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VCA1004_RS01400 PF00333 Ribosomal protein S5, N-terminal domain VCA1004_RS01400 PF03719 Ribosomal protein S5, C-terminal domain VCA1004_RS01405 PF00327 Ribosomal protein L30p/L7e VCA1004_RS01410 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VCA1004_RS01415 PF00344 SecY translocase VCA1004_RS01420 PF00444 Ribosomal protein L36 VCA1004_RS01425 PF00416 Ribosomal protein S13/S18 VCA1004_RS01430 PF00411 Ribosomal protein S11 VCA1004_RS01435 PF01479 S4 domain VCA1004_RS01435 PF00163 Ribosomal protein S4/S9 N-terminal domain VCA1004_RS01440 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VCA1004_RS01440 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VCA1004_RS01440 PF01000 RNA polymerase Rpb3/RpoA insert domain VCA1004_RS01445 PF01196 Ribosomal protein L17 VCA1004_RS01455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCA1004_RS01455 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCA1004_RS01460 PF08525 Opacity-associated protein A N-terminal motif VCA1004_RS01460 PF04225 Opacity-associated protein A LysM-like domain VCA1004_RS01465 PF13673 Acetyltransferase (GNAT) domain VCA1004_RS01470 PF14824 Sirohaem biosynthesis protein central VCA1004_RS01470 PF10414 Sirohaem synthase dimerisation region VCA1004_RS01470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCA1004_RS01475 PF01507 Phosphoadenosine phosphosulfate reductase family VCA1004_RS01480 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS01485 PF03600 Citrate transporter VCA1004_RS01485 PF02080 TrkA-C domain VCA1004_RS01505 PF00005 ABC transporter VCA1004_RS01515 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VCA1004_RS01520 PF06526 Protein of unknown function (DUF1107) VCA1004_RS01525 PF01625 Peptide methionine sulfoxide reductase VCA1004_RS01530 PF07244 Surface antigen variable number repeat VCA1004_RS01530 PF01103 Surface antigen VCA1004_RS01530 PF17243 POTRA domain TamA domain 1 VCA1004_RS01535 PF04357 TamB, inner membrane protein subunit of TAM complex VCA1004_RS01540 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VCA1004_RS01550 PF00719 Inorganic pyrophosphatase VCA1004_RS01555 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VCA1004_RS01560 PF02875 Mur ligase family, glutamate ligase domain VCA1004_RS01560 PF08245 Mur ligase middle domain VCA1004_RS01560 PF01225 Mur ligase family, catalytic domain VCA1004_RS01565 PF02441 Flavoprotein VCA1004_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS01580 PF00005 ABC transporter VCA1004_RS01590 PF13638 PIN domain VCA1004_RS01590 PF02562 PhoH-like protein VCA1004_RS01595 PF18337 RapA N-terminal Tudor like domain VCA1004_RS01595 PF00176 SNF2 family N-terminal domain VCA1004_RS01595 PF12137 RNA polymerase recycling family C-terminal VCA1004_RS01595 PF00271 Helicase conserved C-terminal domain VCA1004_RS01595 PF18339 RapA N-terminal Tudor like domain 1 VCA1004_RS01600 PF00849 RNA pseudouridylate synthase VCA1004_RS01605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCA1004_RS01605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCA1004_RS01615 PF01316 Arginine repressor, DNA binding domain VCA1004_RS01615 PF02863 Arginine repressor, C-terminal domain VCA1004_RS01620 PF00056 lactate/malate dehydrogenase, NAD binding domain VCA1004_RS01620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VCA1004_RS01625 PF00348 Polyprenyl synthetase VCA1004_RS01630 PF00829 Ribosomal prokaryotic L21 protein VCA1004_RS01635 PF01016 Ribosomal L27 protein VCA1004_RS01640 PF01926 50S ribosome-binding GTPase VCA1004_RS01640 PF01018 GTP1/OBG VCA1004_RS01645 PF06738 Putative threonine/serine exporter VCA1004_RS01650 PF12821 Threonine/Serine exporter, ThrE VCA1004_RS01655 PF00186 Dihydrofolate reductase VCA1004_RS01660 PF00149 Calcineurin-like phosphoesterase VCA1004_RS01665 PF04379 ApaG domain VCA1004_RS01670 PF00398 Ribosomal RNA adenine dimethylase VCA1004_RS01675 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VCA1004_RS01680 PF09312 SurA N-terminal domain VCA1004_RS01685 PF04453 LPS transport system D VCA1004_RS01685 PF03968 OstA-like protein VCA1004_RS01690 PF05099 Tellurite resistance protein TerB VCA1004_RS01690 PF00226 DnaJ domain VCA1004_RS01700 PF00694 Aconitase C-terminal domain VCA1004_RS01705 PF00330 Aconitase family (aconitate hydratase) VCA1004_RS01710 PF00180 Isocitrate/isopropylmalate dehydrogenase VCA1004_RS01715 PF00682 HMGL-like VCA1004_RS01715 PF08502 LeuA allosteric (dimerisation) domain VCA1004_RS01720 PF01569 PAP2 superfamily VCA1004_RS01730 PF03466 LysR substrate binding domain VCA1004_RS01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS01735 PF00205 Thiamine pyrophosphate enzyme, central domain VCA1004_RS01735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCA1004_RS01735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCA1004_RS01740 PF10369 Small subunit of acetolactate synthase VCA1004_RS01745 PF02887 Pyruvate kinase, alpha/beta domain VCA1004_RS01745 PF00224 Pyruvate kinase, barrel domain VCA1004_RS01750 PF08220 DeoR-like helix-turn-helix domain VCA1004_RS01750 PF00455 DeoR C terminal sensor domain VCA1004_RS01755 PF01380 SIS domain VCA1004_RS01760 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VCA1004_RS01765 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system VCA1004_RS01770 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VCA1004_RS01780 PF00535 Glycosyl transferase family 2 VCA1004_RS01785 PF13411 MerR HTH family regulatory protein VCA1004_RS01790 PF03922 OmpW family VCA1004_RS01795 PF02801 Beta-ketoacyl synthase, C-terminal domain VCA1004_RS01795 PF00109 Beta-ketoacyl synthase, N-terminal domain VCA1004_RS01810 PF02801 Beta-ketoacyl synthase, C-terminal domain VCA1004_RS01810 PF00109 Beta-ketoacyl synthase, N-terminal domain VCA1004_RS01835 PF00221 Aromatic amino acid lyase VCA1004_RS01850 PF00501 AMP-binding enzyme VCA1004_RS01850 PF13193 AMP-binding enzyme C-terminal domain VCA1004_RS01860 PF00550 Phosphopantetheine attachment site VCA1004_RS01865 PF00550 Phosphopantetheine attachment site VCA1004_RS01885 PF04820 Tryptophan halogenase VCA1004_RS01890 PF00529 HlyD membrane-fusion protein of T1SS VCA1004_RS01890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS01895 PF11742 Protein of unknown function (DUF3302) VCA1004_RS01900 PF13593 SBF-like CPA transporter family (DUF4137) VCA1004_RS01910 PF01184 GPR1/FUN34/yaaH family VCA1004_RS01915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCA1004_RS01920 PF03773 Predicted permease VCA1004_RS01930 PF08281 Sigma-70, region 4 VCA1004_RS01930 PF04542 Sigma-70 region 2 VCA1004_RS01940 PF04546 Sigma-70, non-essential region VCA1004_RS01940 PF04545 Sigma-70, region 4 VCA1004_RS01940 PF04539 Sigma-70 region 3 VCA1004_RS01940 PF04542 Sigma-70 region 2 VCA1004_RS01940 PF03979 Sigma-70 factor, region 1.1 VCA1004_RS01940 PF00140 Sigma-70 factor, region 1.2 VCA1004_RS01945 PF10410 DnaB-helicase binding domain of primase VCA1004_RS01945 PF01807 CHC2 zinc finger VCA1004_RS01945 PF08275 DNA primase catalytic core, N-terminal domain VCA1004_RS01945 PF08278 DNA primase DnaG DnaB-binding VCA1004_RS01950 PF09424 Yqey-like protein VCA1004_RS01955 PF01165 Ribosomal protein S21 VCA1004_RS01960 PF00814 Glycoprotease family VCA1004_RS01965 PF02660 Glycerol-3-phosphate acyltransferase VCA1004_RS01970 PF02152 Dihydroneopterin aldolase VCA1004_RS01975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCA1004_RS01980 PF02673 Bacitracin resistance protein BacA VCA1004_RS01985 PF01743 Poly A polymerase head domain VCA1004_RS01985 PF01966 HD domain VCA1004_RS01985 PF12627 Probable RNA and SrmB- binding site of polymerase A VCA1004_RS01990 PF13401 AAA domain VCA1004_RS01990 PF01471 Putative peptidoglycan binding domain VCA1004_RS02000 PF00860 Permease family VCA1004_RS02005 PF01734 Patatin-like phospholipase VCA1004_RS02010 PF06434 Aconitate hydratase 2 N-terminus VCA1004_RS02010 PF11791 Aconitate B N-terminal domain VCA1004_RS02010 PF00330 Aconitase family (aconitate hydratase) VCA1004_RS02020 PF08239 Bacterial SH3 domain VCA1004_RS02025 PF01384 Phosphate transporter family VCA1004_RS02030 PF01865 Protein of unknown function DUF47 VCA1004_RS02035 PF01928 CYTH domain VCA1004_RS02040 PF00027 Cyclic nucleotide-binding domain VCA1004_RS02040 PF07885 Ion channel VCA1004_RS02045 PF03710 Glutamate-ammonia ligase adenylyltransferase VCA1004_RS02045 PF08335 GlnD PII-uridylyltransferase VCA1004_RS02050 PF00294 pfkB family carbohydrate kinase VCA1004_RS02050 PF01467 Cytidylyltransferase-like VCA1004_RS02055 PF02321 Outer membrane efflux protein VCA1004_RS02060 PF00293 NUDIX domain VCA1004_RS02065 PF06853 Protein of unknown function (DUF1249) VCA1004_RS02070 PF00149 Calcineurin-like phosphoesterase VCA1004_RS02075 PF05728 Uncharacterised protein family (UPF0227) VCA1004_RS02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS02080 PF01751 Toprim domain VCA1004_RS02080 PF00204 DNA gyrase B VCA1004_RS02080 PF00986 DNA gyrase B subunit, carboxyl terminus VCA1004_RS02085 PF03989 DNA gyrase C-terminal domain, beta-propeller VCA1004_RS02085 PF00521 DNA gyrase/topoisomerase IV, subunit A VCA1004_RS02090 PF07662 Na+ dependent nucleoside transporter C-terminus VCA1004_RS02090 PF01773 Na+ dependent nucleoside transporter N-terminus VCA1004_RS02090 PF07670 Nucleoside recognition VCA1004_RS02095 PF13180 PDZ domain VCA1004_RS02100 PF00595 PDZ domain VCA1004_RS02105 PF06295 Protein of unknown function (DUF1043) VCA1004_RS02110 PF03969 AFG1-like ATPase VCA1004_RS02115 PF00572 Ribosomal protein L13 VCA1004_RS02120 PF00380 Ribosomal protein S9/S16 VCA1004_RS02125 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VCA1004_RS02125 PF00355 Rieske [2Fe-2S] domain VCA1004_RS02130 PF00032 Cytochrome b(C-terminal)/b6/petD VCA1004_RS02130 PF00033 Cytochrome b/b6/petB VCA1004_RS02135 PF02167 Cytochrome C1 family VCA1004_RS02140 PF00043 Glutathione S-transferase, C-terminal domain VCA1004_RS02140 PF02798 Glutathione S-transferase, N-terminal domain VCA1004_RS02145 PF04386 Stringent starvation protein B VCA1004_RS02150 PF04204 Homoserine O-succinyltransferase VCA1004_RS02155 PF03458 UPF0126 domain VCA1004_RS02160 PF01497 Periplasmic binding protein VCA1004_RS02165 PF01048 Phosphorylase superfamily VCA1004_RS02175 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS02175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCA1004_RS02180 PF01645 Conserved region in glutamate synthase VCA1004_RS02180 PF00310 Glutamine amidotransferases class-II VCA1004_RS02180 PF04898 Glutamate synthase central domain VCA1004_RS02180 PF01493 GXGXG motif VCA1004_RS02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS02185 PF01627 Hpt domain VCA1004_RS02185 PF00989 PAS fold VCA1004_RS02185 PF18415 Histidine kinase receptor ArcB trans-membrane domain VCA1004_RS02185 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS02185 PF00072 Response regulator receiver domain VCA1004_RS02190 PF00072 Response regulator receiver domain VCA1004_RS02190 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS02195 PF13276 HTH-like domain VCA1004_RS02195 PF13333 Integrase core domain VCA1004_RS02195 PF00665 Integrase core domain VCA1004_RS02205 PF13840 ACT domain VCA1004_RS02205 PF00742 Homoserine dehydrogenase VCA1004_RS02205 PF01842 ACT domain VCA1004_RS02205 PF00696 Amino acid kinase family VCA1004_RS02205 PF03447 Homoserine dehydrogenase, NAD binding domain VCA1004_RS02210 PF00288 GHMP kinases N terminal domain VCA1004_RS02210 PF08544 GHMP kinases C terminal VCA1004_RS02215 PF14821 Threonine synthase N terminus VCA1004_RS02215 PF00291 Pyridoxal-phosphate dependent enzyme VCA1004_RS02220 PF01228 Glycine radical VCA1004_RS02225 PF03167 Uracil DNA glycosylase superfamily VCA1004_RS02240 PF01235 Sodium:alanine symporter family VCA1004_RS02245 PF03883 Peroxide stress protein YaaA VCA1004_RS02250 PF00270 DEAD/DEAH box helicase VCA1004_RS02250 PF00271 Helicase conserved C-terminal domain VCA1004_RS02255 PF05175 Methyltransferase small domain VCA1004_RS02260 PF05525 Branched-chain amino acid transport protein VCA1004_RS02265 PF00258 Flavodoxin VCA1004_RS02270 PF00589 Phage integrase family VCA1004_RS02270 PF02899 Phage integrase, N-terminal SAM-like domain VCA1004_RS02275 PF13098 Thioredoxin-like domain VCA1004_RS02275 PF10411 Disulfide bond isomerase protein N-terminus VCA1004_RS02280 PF04266 ASCH domain VCA1004_RS02285 PF17768 RecJ OB domain VCA1004_RS02285 PF01368 DHH family VCA1004_RS02285 PF02272 DHHA1 domain VCA1004_RS02295 PF01336 OB-fold nucleic acid binding domain VCA1004_RS02295 PF00152 tRNA synthetases class II (D, K and N) VCA1004_RS02300 PF01590 GAF domain VCA1004_RS02300 PF00158 Sigma-54 interaction domain VCA1004_RS02300 PF02954 Bacterial regulatory protein, Fis family VCA1004_RS02305 PF00248 Aldo/keto reductase family VCA1004_RS02315 PF02976 DNA mismatch repair enzyme MutH VCA1004_RS02320 PF00293 NUDIX domain VCA1004_RS02325 PF02896 PEP-utilising enzyme, TIM barrel domain VCA1004_RS02325 PF00391 PEP-utilising enzyme, mobile domain VCA1004_RS02325 PF05524 PEP-utilising enzyme, N-terminal VCA1004_RS02325 PF01590 GAF domain VCA1004_RS02330 PF01790 Prolipoprotein diacylglyceryl transferase VCA1004_RS02335 PF00303 Thymidylate synthase VCA1004_RS02340 PF03466 LysR substrate binding domain VCA1004_RS02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS02345 PF01022 Bacterial regulatory protein, arsR family VCA1004_RS02350 PF01649 Ribosomal protein S20 VCA1004_RS02355 PF03023 Lipid II flippase MurJ VCA1004_RS02360 PF06574 FAD synthetase VCA1004_RS02360 PF01687 Riboflavin kinase VCA1004_RS02365 PF00133 tRNA synthetases class I (I, L, M and V) VCA1004_RS02365 PF06827 Zinc finger found in FPG and IleRS VCA1004_RS02365 PF08264 Anticodon-binding domain of tRNA VCA1004_RS02370 PF01252 Signal peptidase (SPase) II VCA1004_RS02375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCA1004_RS02380 PF02401 LytB protein VCA1004_RS02395 PF02554 Carbon starvation protein CstA VCA1004_RS02415 PF08443 RimK-like ATP-grasp domain VCA1004_RS02415 PF18030 RimK PreATP-grasp domain VCA1004_RS02415 PF02080 TrkA-C domain VCA1004_RS02420 PF04397 LytTr DNA-binding domain VCA1004_RS02420 PF00072 Response regulator receiver domain VCA1004_RS02425 PF07694 5TMR of 5TMR-LYT VCA1004_RS02425 PF06580 Histidine kinase VCA1004_RS02430 PF00793 DAHP synthetase I family VCA1004_RS02435 PF02153 Prephenate dehydrogenase VCA1004_RS02435 PF01817 Chorismate mutase type II VCA1004_RS02445 PF01551 Peptidase family M23 VCA1004_RS02445 PF10145 Phage-related minor tail protein VCA1004_RS02445 PF01464 Transglycosylase SLT domain VCA1004_RS02450 PF00005 ABC transporter VCA1004_RS02450 PF12848 ABC transporter VCA1004_RS02455 PF01464 Transglycosylase SLT domain VCA1004_RS02455 PF14718 Soluble lytic murein transglycosylase L domain VCA1004_RS02460 PF01371 Trp repressor protein VCA1004_RS02465 PF01931 Protein of unknown function DUF84 VCA1004_RS02470 PF01817 Chorismate mutase type II VCA1004_RS02470 PF00800 Prephenate dehydratase VCA1004_RS02475 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCA1004_RS02480 PF13525 Outer membrane lipoprotein VCA1004_RS02485 PF00849 RNA pseudouridylate synthase VCA1004_RS02485 PF01479 S4 domain VCA1004_RS02490 PF02578 Multi-copper polyphenol oxidoreductase laccase VCA1004_RS02495 PF07724 AAA domain (Cdc48 subfamily) VCA1004_RS02495 PF17871 AAA lid domain VCA1004_RS02495 PF00004 ATPase family associated with various cellular activities (AAA) VCA1004_RS02495 PF02861 Clp amino terminal domain, pathogenicity island component VCA1004_RS02495 PF10431 C-terminal, D2-small domain, of ClpB protein VCA1004_RS02545 PF00881 Nitroreductase family VCA1004_RS02550 PF12838 4Fe-4S dicluster domain VCA1004_RS02555 PF01136 Peptidase family U32 VCA1004_RS02555 PF16325 Peptidase family U32 C-terminal domain VCA1004_RS02560 PF04381 Putative exonuclease, RdgC VCA1004_RS02565 PF00072 Response regulator receiver domain VCA1004_RS02565 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS02570 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS02570 PF00989 PAS fold VCA1004_RS02570 PF11808 Phosphate regulon sensor protein PhoR VCA1004_RS02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS02575 PF12849 PBP superfamily domain VCA1004_RS02580 PF02541 Ppx/GppA phosphatase family VCA1004_RS02585 PF13090 Polyphosphate kinase C-terminal domain 2 VCA1004_RS02585 PF02503 Polyphosphate kinase middle domain VCA1004_RS02585 PF17941 Polyphosphate kinase C-terminal domain 1 VCA1004_RS02585 PF13089 Polyphosphate kinase N-terminal domain VCA1004_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS02600 PF00005 ABC transporter VCA1004_RS02605 PF01895 PhoU domain VCA1004_RS02610 PF03932 CutC family VCA1004_RS02615 PF10417 C-terminal domain of 1-Cys peroxiredoxin VCA1004_RS02615 PF00578 AhpC/TSA family VCA1004_RS02620 PF02547 Queuosine biosynthesis protein VCA1004_RS02625 PF01702 Queuine tRNA-ribosyltransferase VCA1004_RS02630 PF02699 Preprotein translocase subunit VCA1004_RS02635 PF13721 SecD export protein N-terminal TM region VCA1004_RS02635 PF07549 SecD/SecF GG Motif VCA1004_RS02635 PF02355 Protein export membrane protein VCA1004_RS02640 PF07549 SecD/SecF GG Motif VCA1004_RS02640 PF02355 Protein export membrane protein VCA1004_RS02645 PF00459 Inositol monophosphatase family VCA1004_RS02650 PF00588 SpoU rRNA Methylase family VCA1004_RS02655 PF02082 Transcriptional regulator VCA1004_RS02660 PF00266 Aminotransferase class-V VCA1004_RS02665 PF01592 NifU-like N terminal domain VCA1004_RS02670 PF01521 Iron-sulphur cluster biosynthesis VCA1004_RS02675 PF00226 DnaJ domain VCA1004_RS02675 PF07743 HSCB C-terminal oligomerisation domain VCA1004_RS02680 PF00012 Hsp70 protein VCA1004_RS02685 PF00111 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS02690 PF04384 Iron-sulphur cluster assembly VCA1004_RS02695 PF00883 Cytosol aminopeptidase family, catalytic domain VCA1004_RS02695 PF12404 Peptidase VCA1004_RS02700 PF00334 Nucleoside diphosphate kinase VCA1004_RS02705 PF04055 Radical SAM superfamily VCA1004_RS02715 PF13464 Domain of unknown function (DUF4115) VCA1004_RS02720 PF04551 GcpE protein VCA1004_RS02725 PF03129 Anticodon binding domain VCA1004_RS02725 PF13393 Histidyl-tRNA synthetase VCA1004_RS02730 PF09976 Tetratricopeptide repeat-like domain VCA1004_RS02735 PF13360 PQQ-like domain VCA1004_RS02740 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VCA1004_RS02740 PF01926 50S ribosome-binding GTPase VCA1004_RS02750 PF13742 OB-fold nucleic acid binding domain VCA1004_RS02750 PF02601 Exonuclease VII, large subunit VCA1004_RS02755 PF00571 CBS domain VCA1004_RS02755 PF00478 IMP dehydrogenase / GMP reductase domain VCA1004_RS02760 PF00117 Glutamine amidotransferase class-I VCA1004_RS02760 PF00958 GMP synthase C terminal domain VCA1004_RS02760 PF02540 NAD synthase VCA1004_RS02770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCA1004_RS02770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VCA1004_RS02780 PF00924 Mechanosensitive ion channel VCA1004_RS02785 PF03466 LysR substrate binding domain VCA1004_RS02785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS02790 PF00107 Zinc-binding dehydrogenase VCA1004_RS02790 PF08240 Alcohol dehydrogenase GroES-like domain VCA1004_RS02795 PF00756 Putative esterase VCA1004_RS02800 PF02028 BCCT, betaine/carnitine/choline family transporter VCA1004_RS02805 PF06481 COX Aromatic Rich Motif VCA1004_RS02805 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VCA1004_RS02810 PF00115 Cytochrome C and Quinol oxidase polypeptide I VCA1004_RS02815 PF00510 Cytochrome c oxidase subunit III VCA1004_RS02820 PF03626 Prokaryotic Cytochrome C oxidase subunit IV VCA1004_RS02825 PF01040 UbiA prenyltransferase family VCA1004_RS02835 PF00916 Sulfate permease family VCA1004_RS02835 PF01740 STAS domain VCA1004_RS02840 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS02840 PF13192 Thioredoxin domain VCA1004_RS02845 PF10417 C-terminal domain of 1-Cys peroxiredoxin VCA1004_RS02845 PF00578 AhpC/TSA family VCA1004_RS02850 PF00455 DeoR C terminal sensor domain VCA1004_RS02850 PF08220 DeoR-like helix-turn-helix domain VCA1004_RS02855 PF00294 pfkB family carbohydrate kinase VCA1004_RS02860 PF02733 Dak1 domain VCA1004_RS02860 PF02734 DAK2 domain VCA1004_RS02865 PF00465 Iron-containing alcohol dehydrogenase VCA1004_RS02870 PF00037 4Fe-4S binding domain VCA1004_RS02870 PF12798 4Fe-4S binding domain VCA1004_RS02875 PF00361 Proton-conducting membrane transporter VCA1004_RS02880 PF00146 NADH dehydrogenase VCA1004_RS02885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCA1004_RS02885 PF00361 Proton-conducting membrane transporter VCA1004_RS02890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VCA1004_RS02895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VCA1004_RS02895 PF00361 Proton-conducting membrane transporter VCA1004_RS02900 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit VCA1004_RS02900 PF00374 Nickel-dependent hydrogenase VCA1004_RS02900 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VCA1004_RS02905 PF12838 4Fe-4S dicluster domain VCA1004_RS02910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VCA1004_RS02915 PF07450 Formate hydrogenlyase maturation protein HycH VCA1004_RS02920 PF01750 Hydrogenase maturation protease VCA1004_RS02930 PF12800 4Fe-4S binding domain VCA1004_RS02930 PF13247 4Fe-4S dicluster domain VCA1004_RS02940 PF01590 GAF domain VCA1004_RS02940 PF00158 Sigma-54 interaction domain VCA1004_RS02945 PF02634 FdhD/NarQ family VCA1004_RS02955 PF17788 HypF Kae1-like domain VCA1004_RS02955 PF00708 Acylphosphatase VCA1004_RS02955 PF07503 HypF finger VCA1004_RS02955 PF01300 Telomere recombination VCA1004_RS02960 PF01455 HupF/HypC family VCA1004_RS02965 PF01924 Hydrogenase formation hypA family VCA1004_RS02970 PF02769 AIR synthase related protein, C-terminal domain VCA1004_RS02970 PF00586 AIR synthase related protein, N-terminal domain VCA1004_RS02975 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA VCA1004_RS02980 PF02492 CobW/HypB/UreG, nucleotide-binding domain VCA1004_RS02985 PF00581 Rhodanese-like domain VCA1004_RS02990 PF03144 Elongation factor Tu domain 2 VCA1004_RS02990 PF09105 Elongation factor SelB, winged helix VCA1004_RS02990 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS02990 PF09107 Elongation factor SelB, winged helix VCA1004_RS02990 PF09106 Elongation factor SelB, winged helix VCA1004_RS02995 PF12390 Selenocysteine synthase N terminal VCA1004_RS02995 PF03841 L-seryl-tRNA selenium transferase VCA1004_RS03000 PF02769 AIR synthase related protein, C-terminal domain VCA1004_RS03000 PF00586 AIR synthase related protein, N-terminal domain VCA1004_RS03005 PF04143 Sulphur transport VCA1004_RS03010 PF00884 Sulfatase VCA1004_RS03025 PF01719 Plasmid replication protein VCA1004_RS03025 PF00910 RNA helicase VCA1004_RS03045 PF04002 RadC-like JAB domain VCA1004_RS03055 PF13099 Domain of unknown function (DUF3944) VCA1004_RS03055 PF03981 Ubiquinol-cytochrome C chaperone VCA1004_RS03090 PF14338 Mrr N-terminal domain VCA1004_RS03090 PF04471 Restriction endonuclease VCA1004_RS03095 PF02384 N-6 DNA Methylase VCA1004_RS03115 PF11798 IMS family HHH motif VCA1004_RS03115 PF11799 impB/mucB/samB family C-terminal domain VCA1004_RS03115 PF00817 impB/mucB/samB family VCA1004_RS03115 PF13438 Domain of unknown function (DUF4113) VCA1004_RS03120 PF00717 Peptidase S24-like VCA1004_RS03125 PF13356 Arm DNA-binding domain VCA1004_RS03125 PF00589 Phage integrase family VCA1004_RS03135 PF01668 SmpB protein VCA1004_RS03140 PF03364 Polyketide cyclase / dehydrase and lipid transport VCA1004_RS03145 PF03658 RnfH family Ubiquitin VCA1004_RS03150 PF13333 Integrase core domain VCA1004_RS03150 PF13276 HTH-like domain VCA1004_RS03150 PF00665 Integrase core domain VCA1004_RS03160 PF04355 SmpA / OmlA family VCA1004_RS03165 PF02463 RecF/RecN/SMC N terminal domain VCA1004_RS03170 PF01513 ATP-NAD kinase VCA1004_RS03175 PF01025 GrpE VCA1004_RS03180 PF00012 Hsp70 protein VCA1004_RS03185 PF01556 DnaJ C terminal domain VCA1004_RS03185 PF00684 DnaJ central domain VCA1004_RS03185 PF00226 DnaJ domain VCA1004_RS03195 PF07963 Prokaryotic N-terminal methylation motif VCA1004_RS03215 PF14437 MafB19-like deaminase VCA1004_RS03220 PF01464 Transglycosylase SLT domain VCA1004_RS03220 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS03225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VCA1004_RS03225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VCA1004_RS03225 PF02769 AIR synthase related protein, C-terminal domain VCA1004_RS03240 PF00570 HRDC domain VCA1004_RS03240 PF16124 RecQ zinc-binding VCA1004_RS03240 PF00271 Helicase conserved C-terminal domain VCA1004_RS03240 PF00270 DEAD/DEAH box helicase VCA1004_RS03240 PF09382 RQC domain VCA1004_RS03270 PF06786 Uncharacterised protein family (UPF0253) VCA1004_RS03275 PF04073 Aminoacyl-tRNA editing domain VCA1004_RS03275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCA1004_RS03275 PF03129 Anticodon binding domain VCA1004_RS03280 PF18389 TrmO C-terminal domain VCA1004_RS03280 PF01980 tRNA-methyltransferase O VCA1004_RS03285 PF01197 Ribosomal protein L31 VCA1004_RS03290 PF00444 Ribosomal protein L36 VCA1004_RS03295 PF03180 NLPA lipoprotein VCA1004_RS03300 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS03305 PF00005 ABC transporter VCA1004_RS03305 PF09383 NIL domain VCA1004_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS03320 PF12911 N-terminal TM domain of oligopeptide transport permease C VCA1004_RS03320 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS03325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS03330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS03330 PF00005 ABC transporter VCA1004_RS03335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS03335 PF00005 ABC transporter VCA1004_RS03350 PF00464 Serine hydroxymethyltransferase VCA1004_RS03360 PF03477 ATP cone domain VCA1004_RS03365 PF01872 RibD C-terminal domain VCA1004_RS03365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCA1004_RS03370 PF00677 Lumazine binding domain VCA1004_RS03375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VCA1004_RS03375 PF00925 GTP cyclohydrolase II VCA1004_RS03380 PF00885 6,7-dimethyl-8-ribityllumazine synthase VCA1004_RS03385 PF01029 NusB family VCA1004_RS03390 PF02769 AIR synthase related protein, C-terminal domain VCA1004_RS03390 PF00586 AIR synthase related protein, N-terminal domain VCA1004_RS03395 PF04608 Phosphatidylglycerophosphatase A VCA1004_RS03405 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VCA1004_RS03405 PF02779 Transketolase, pyrimidine binding domain VCA1004_RS03405 PF02780 Transketolase, C-terminal domain VCA1004_RS03410 PF00348 Polyprenyl synthetase VCA1004_RS03415 PF02609 Exonuclease VII small subunit VCA1004_RS03420 PF02926 THUMP domain VCA1004_RS03420 PF02568 Thiamine biosynthesis protein (ThiI) VCA1004_RS03435 PF04241 Protein of unknown function (DUF423) VCA1004_RS03440 PF01728 FtsJ-like methyltransferase VCA1004_RS03440 PF18125 RlmM ferredoxin-like domain VCA1004_RS03445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCA1004_RS03445 PF01367 5'-3' exonuclease, C-terminal SAM fold VCA1004_RS03450 PF11892 Domain of unknown function (DUF3412) VCA1004_RS03450 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VCA1004_RS03450 PF03641 Possible lysine decarboxylase VCA1004_RS03460 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VCA1004_RS03460 PF14489 QueF-like protein VCA1004_RS03465 PF07348 Syd protein (SUKH-2) VCA1004_RS03470 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VCA1004_RS03475 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VCA1004_RS03495 PF04287 tRNA pseudouridine synthase C VCA1004_RS03500 PF00849 RNA pseudouridylate synthase VCA1004_RS03505 PF11944 Protein of unknown function (DUF3461) VCA1004_RS03510 PF01966 HD domain VCA1004_RS03510 PF01842 ACT domain VCA1004_RS03510 PF08335 GlnD PII-uridylyltransferase VCA1004_RS03510 PF01909 Nucleotidyltransferase domain VCA1004_RS03515 PF00557 Metallopeptidase family M24 VCA1004_RS03520 PF00318 Ribosomal protein S2 VCA1004_RS03525 PF00889 Elongation factor TS VCA1004_RS03530 PF00696 Amino acid kinase family VCA1004_RS03535 PF01765 Ribosome recycling factor VCA1004_RS03540 PF01255 Putative undecaprenyl diphosphate synthase VCA1004_RS03550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VCA1004_RS03550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VCA1004_RS03550 PF13288 DXP reductoisomerase C-terminal domain VCA1004_RS03555 PF02163 Peptidase family M50 VCA1004_RS03555 PF17820 PDZ domain VCA1004_RS03560 PF07244 Surface antigen variable number repeat VCA1004_RS03560 PF01103 Surface antigen VCA1004_RS03565 PF03938 Outer membrane protein (OmpH-like) VCA1004_RS03570 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS03570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VCA1004_RS03575 PF07977 FabA-like domain VCA1004_RS03580 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS03580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VCA1004_RS03585 PF02684 Lipid-A-disaccharide synthetase VCA1004_RS03590 PF01351 Ribonuclease HII VCA1004_RS03595 PF02811 PHP domain VCA1004_RS03595 PF01336 OB-fold nucleic acid binding domain VCA1004_RS03595 PF07733 Bacterial DNA polymerase III alpha NTPase domain VCA1004_RS03595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VCA1004_RS03595 PF14579 Helix-hairpin-helix motif VCA1004_RS03600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VCA1004_RS03605 PF11734 TilS substrate C-terminal domain VCA1004_RS03605 PF01171 PP-loop family VCA1004_RS03605 PF09179 TilS substrate binding domain VCA1004_RS03610 PF00543 Nitrogen regulatory protein P-II VCA1004_RS03615 PF03372 Endonuclease/Exonuclease/phosphatase family VCA1004_RS03620 PF01464 Transglycosylase SLT domain VCA1004_RS03620 PF01476 LysM domain VCA1004_RS03625 PF00753 Metallo-beta-lactamase superfamily VCA1004_RS03625 PF16123 Hydroxyacylglutathione hydrolase C-terminus VCA1004_RS03630 PF08241 Methyltransferase domain VCA1004_RS03635 PF00075 RNase H VCA1004_RS03640 PF00929 Exonuclease VCA1004_RS03645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCA1004_RS03645 PF09317 Domain of unknown function (DUF1974) VCA1004_RS03645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCA1004_RS03645 PF02770 Acyl-CoA dehydrogenase, middle domain VCA1004_RS03650 PF13580 SIS domain VCA1004_RS03655 PF13230 Glutamine amidotransferases class-II VCA1004_RS03660 PF00551 Formyl transferase VCA1004_RS03665 PF02769 AIR synthase related protein, C-terminal domain VCA1004_RS03665 PF00586 AIR synthase related protein, N-terminal domain VCA1004_RS03680 PF00465 Iron-containing alcohol dehydrogenase VCA1004_RS03685 PF00107 Zinc-binding dehydrogenase VCA1004_RS03685 PF16884 N-terminal domain of oxidoreductase VCA1004_RS03690 PF03466 LysR substrate binding domain VCA1004_RS03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS03700 PF03358 NADPH-dependent FMN reductase VCA1004_RS03705 PF03960 ArsC family VCA1004_RS03710 PF13181 Tetratricopeptide repeat VCA1004_RS03710 PF01435 Peptidase family M48 VCA1004_RS03720 PF01594 AI-2E family transporter VCA1004_RS03725 PF00578 AhpC/TSA family VCA1004_RS03735 PF00701 Dihydrodipicolinate synthetase family VCA1004_RS03740 PF06804 NlpB/DapX lipoprotein VCA1004_RS03755 PF07687 Peptidase dimerisation domain VCA1004_RS03755 PF01546 Peptidase family M20/M25/M40 VCA1004_RS03760 PF03960 ArsC family VCA1004_RS03780 PF04261 Dyp-type peroxidase family VCA1004_RS03785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCA1004_RS03790 PF00391 PEP-utilising enzyme, mobile domain VCA1004_RS03790 PF02896 PEP-utilising enzyme, TIM barrel domain VCA1004_RS03790 PF05524 PEP-utilising enzyme, N-terminal VCA1004_RS03795 PF00381 PTS HPr component phosphorylation site VCA1004_RS03800 PF00291 Pyridoxal-phosphate dependent enzyme VCA1004_RS03810 PF04354 ZipA, C-terminal FtsZ-binding domain VCA1004_RS03815 PF01653 NAD-dependent DNA ligase adenylation domain VCA1004_RS03815 PF00533 BRCA1 C Terminus (BRCT) domain VCA1004_RS03815 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VCA1004_RS03815 PF03120 NAD-dependent DNA ligase OB-fold domain VCA1004_RS03815 PF12826 Helix-hairpin-helix motif VCA1004_RS03825 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCA1004_RS03830 PF13411 MerR HTH family regulatory protein VCA1004_RS03835 PF00085 Thioredoxin VCA1004_RS03840 PF08338 Domain of unknown function (DUF1731) VCA1004_RS03840 PF01370 NAD dependent epimerase/dehydratase family VCA1004_RS03845 PF12850 Calcineurin-like phosphoesterase superfamily domain VCA1004_RS03855 PF17323 Trans-membrane regulatory protein ToxS VCA1004_RS03860 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS03865 PF00183 Hsp90 protein VCA1004_RS03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS03870 PF05191 Adenylate kinase, active site lid VCA1004_RS03875 PF00762 Ferrochelatase VCA1004_RS03880 PF00854 POT family VCA1004_RS03885 PF02357 Transcription termination factor nusG VCA1004_RS03890 PF13537 Glutamine amidotransferase domain VCA1004_RS03890 PF00733 Asparagine synthase VCA1004_RS03895 PF00999 Sodium/hydrogen exchanger family VCA1004_RS03900 PF00480 ROK family VCA1004_RS03900 PF01047 MarR family VCA1004_RS03905 PF01979 Amidohydrolase family VCA1004_RS03910 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VCA1004_RS03915 PF00367 phosphotransferase system, EIIB VCA1004_RS03915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCA1004_RS03915 PF02378 Phosphotransferase system, EIIC VCA1004_RS03920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VCA1004_RS03920 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCA1004_RS03925 PF01475 Ferric uptake regulator family VCA1004_RS03930 PF00258 Flavodoxin VCA1004_RS03940 PF12697 Alpha/beta hydrolase family VCA1004_RS03945 PF00034 Cytochrome c VCA1004_RS03950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCA1004_RS03955 PF17206 SeqA protein N-terminal domain VCA1004_RS03955 PF03925 SeqA protein C-terminal domain VCA1004_RS03960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCA1004_RS03960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCA1004_RS03960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCA1004_RS03960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCA1004_RS03970 PF01784 NIF3 (NGG1p interacting factor 3) VCA1004_RS03975 PF00285 Citrate synthase, C-terminal domain VCA1004_RS03980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCA1004_RS03985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VCA1004_RS03990 PF02910 Fumarate reductase flavoprotein C-term VCA1004_RS03990 PF00890 FAD binding domain VCA1004_RS03995 PF13085 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS04000 PF16078 2-oxoglutarate dehydrogenase N-terminus VCA1004_RS04000 PF02779 Transketolase, pyrimidine binding domain VCA1004_RS04000 PF16870 2-oxoglutarate dehydrogenase C-terminal VCA1004_RS04000 PF00676 Dehydrogenase E1 component VCA1004_RS04005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCA1004_RS04005 PF00364 Biotin-requiring enzyme VCA1004_RS04005 PF02817 e3 binding domain VCA1004_RS04010 PF08442 ATP-grasp domain VCA1004_RS04010 PF00549 CoA-ligase VCA1004_RS04015 PF00549 CoA-ligase VCA1004_RS04015 PF02629 CoA binding domain VCA1004_RS04025 PF00128 Alpha amylase, catalytic domain VCA1004_RS04025 PF02903 Alpha amylase, N-terminal ig-like domain VCA1004_RS04030 PF00950 ABC 3 transport family VCA1004_RS04035 PF00005 ABC transporter VCA1004_RS04040 PF01297 Zinc-uptake complex component A periplasmic VCA1004_RS04045 PF01476 LysM domain VCA1004_RS04045 PF08525 Opacity-associated protein A N-terminal motif VCA1004_RS04045 PF01551 Peptidase family M23 VCA1004_RS04055 PF04023 FeoA domain VCA1004_RS04060 PF07670 Nucleoside recognition VCA1004_RS04060 PF02421 Ferrous iron transport protein B VCA1004_RS04060 PF17910 FeoB cytosolic helical domain VCA1004_RS04060 PF07664 Ferrous iron transport protein B C terminus VCA1004_RS04070 PF05746 DALR anticodon binding domain VCA1004_RS04070 PF03485 Arginyl tRNA synthetase N terminal domain VCA1004_RS04070 PF00750 tRNA synthetases class I (R) VCA1004_RS04075 PF06185 YecM protein VCA1004_RS04080 PF01842 ACT domain VCA1004_RS04080 PF00551 Formyl transferase VCA1004_RS04085 PF04851 Type III restriction enzyme, res subunit VCA1004_RS04085 PF13307 Helicase C-terminal domain VCA1004_RS04090 PF00814 Glycoprotease family VCA1004_RS04100 PF00561 alpha/beta hydrolase fold VCA1004_RS04105 PF00501 AMP-binding enzyme VCA1004_RS04105 PF13193 AMP-binding enzyme C-terminal domain VCA1004_RS04110 PF01612 3'-5' exonuclease VCA1004_RS04110 PF00570 HRDC domain VCA1004_RS04115 PF03776 Septum formation topological specificity factor MinE VCA1004_RS04120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCA1004_RS04125 PF05209 Septum formation inhibitor MinC, N-terminal domain VCA1004_RS04125 PF03775 Septum formation inhibitor MinC, C-terminal domain VCA1004_RS04130 PF05166 YcgL domain VCA1004_RS04135 PF13406 Transglycosylase SLT domain VCA1004_RS04140 PF00529 HlyD membrane-fusion protein of T1SS VCA1004_RS04140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS04145 PF00873 AcrB/AcrD/AcrF family VCA1004_RS04155 PF06719 AraC-type transcriptional regulator N-terminus VCA1004_RS04155 PF12833 Helix-turn-helix domain VCA1004_RS04160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VCA1004_RS04160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VCA1004_RS04170 PF00709 Adenylosuccinate synthetase VCA1004_RS04175 PF03466 LysR substrate binding domain VCA1004_RS04175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS04180 PF01814 Hemerythrin HHE cation binding domain VCA1004_RS04180 PF04405 Domain of Unknown function (DUF542) VCA1004_RS04185 PF03222 Tryptophan/tyrosine permease family VCA1004_RS04195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCA1004_RS04195 PF00384 Molybdopterin oxidoreductase VCA1004_RS04195 PF01568 Molydopterin dinucleotide binding domain VCA1004_RS04195 PF10518 TAT (twin-arginine translocation) pathway signal sequence VCA1004_RS04200 PF13247 4Fe-4S dicluster domain VCA1004_RS04215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCA1004_RS04215 PF05698 Bacterial trigger factor protein (TF) C-terminus VCA1004_RS04215 PF05697 Bacterial trigger factor protein (TF) VCA1004_RS04220 PF00574 Clp protease VCA1004_RS04225 PF06689 ClpX C4-type zinc finger VCA1004_RS04225 PF10431 C-terminal, D2-small domain, of ClpB protein VCA1004_RS04225 PF07724 AAA domain (Cdc48 subfamily) VCA1004_RS04230 PF00004 ATPase family associated with various cellular activities (AAA) VCA1004_RS04230 PF02190 ATP-dependent protease La (LON) substrate-binding domain VCA1004_RS04230 PF05362 Lon protease (S16) C-terminal proteolytic domain VCA1004_RS04235 PF00216 Bacterial DNA-binding protein VCA1004_RS04240 PF13145 PPIC-type PPIASE domain VCA1004_RS04260 PF13286 Phosphohydrolase-associated domain VCA1004_RS04260 PF01966 HD domain VCA1004_RS04265 PF00563 EAL domain VCA1004_RS04265 PF00498 FHA domain VCA1004_RS04265 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS04270 PF01627 Hpt domain VCA1004_RS04270 PF00072 Response regulator receiver domain VCA1004_RS04270 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS04270 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS04270 PF00989 PAS fold VCA1004_RS04275 PF00196 Bacterial regulatory proteins, luxR family VCA1004_RS04275 PF00072 Response regulator receiver domain VCA1004_RS04285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VCA1004_RS04285 PF02753 Pili assembly chaperone PapD, C-terminal domain VCA1004_RS04290 PF00577 Outer membrane usher protein VCA1004_RS04290 PF13954 PapC N-terminal domain VCA1004_RS04290 PF13953 PapC C-terminal domain VCA1004_RS04300 PF02753 Pili assembly chaperone PapD, C-terminal domain VCA1004_RS04300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VCA1004_RS04310 PF00155 Aminotransferase class I and II VCA1004_RS04315 PF00425 chorismate binding enzyme VCA1004_RS04320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCA1004_RS04320 PF16582 Middle domain of thiamine pyrophosphate VCA1004_RS04320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCA1004_RS04325 PF12697 Alpha/beta hydrolase family VCA1004_RS04330 PF13378 Enolase C-terminal domain-like VCA1004_RS04335 PF00501 AMP-binding enzyme VCA1004_RS04340 PF03601 Conserved hypothetical protein 698 VCA1004_RS04355 PF07085 DRTGG domain VCA1004_RS04355 PF01515 Phosphate acetyl/butaryl transferase VCA1004_RS04360 PF00871 Acetokinase family VCA1004_RS04365 PF04217 Protein of unknown function, DUF412 VCA1004_RS04375 PF02653 Branched-chain amino acid transport system / permease component VCA1004_RS04380 PF00005 ABC transporter VCA1004_RS04385 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS04390 PF01207 Dihydrouridine synthase (Dus) VCA1004_RS04395 PF07517 SecA DEAD-like domain VCA1004_RS04395 PF07516 SecA Wing and Scaffold domain VCA1004_RS04395 PF01043 SecA preprotein cross-linking domain VCA1004_RS04395 PF02810 SEC-C motif VCA1004_RS04400 PF02600 Disulfide bond formation protein DsbB VCA1004_RS04405 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VCA1004_RS04415 PF13276 HTH-like domain VCA1004_RS04415 PF00665 Integrase core domain VCA1004_RS04415 PF13333 Integrase core domain VCA1004_RS04420 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS04420 PF07840 FadR C-terminal domain VCA1004_RS04435 PF09334 tRNA synthetases class I (M) VCA1004_RS04435 PF01588 Putative tRNA binding domain VCA1004_RS04440 PF10609 NUBPL iron-transfer P-loop NTPase VCA1004_RS04445 PF00485 Phosphoribulokinase / Uridine kinase family VCA1004_RS04450 PF00692 dUTPase VCA1004_RS04455 PF05170 AsmA family VCA1004_RS04460 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VCA1004_RS04460 PF12557 Cob(I)alamin adenosyltransferase N terminal VCA1004_RS04465 PF00916 Sulfate permease family VCA1004_RS04465 PF01740 STAS domain VCA1004_RS04470 PF00575 S1 RNA binding domain VCA1004_RS04470 PF10150 Ribonuclease E/G family VCA1004_RS04470 PF12111 Polyribonucleotide phosphorylase C terminal VCA1004_RS04475 PF01479 S4 domain VCA1004_RS04475 PF00849 RNA pseudouridylate synthase VCA1004_RS04480 PF02545 Maf-like protein VCA1004_RS04485 PF02620 Large ribosomal RNA subunit accumulation protein YceD VCA1004_RS04490 PF01783 Ribosomal L32p protein family VCA1004_RS04495 PF02504 Fatty acid synthesis protein VCA1004_RS04500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCA1004_RS04500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCA1004_RS04505 PF00698 Acyl transferase domain VCA1004_RS04515 PF00550 Phosphopantetheine attachment site VCA1004_RS04520 PF02801 Beta-ketoacyl synthase, C-terminal domain VCA1004_RS04520 PF00109 Beta-ketoacyl synthase, N-terminal domain VCA1004_RS04525 PF01063 Amino-transferase class IV VCA1004_RS04530 PF02618 YceG-like family VCA1004_RS04535 PF02223 Thymidylate kinase VCA1004_RS04540 PF09115 DNA polymerase III, delta subunit, C terminal VCA1004_RS04545 PF01026 TatD related DNase VCA1004_RS04550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCA1004_RS04550 PF00367 phosphotransferase system, EIIB VCA1004_RS04550 PF02378 Phosphotransferase system, EIIC VCA1004_RS04565 PF00209 Sodium:neurotransmitter symporter family VCA1004_RS04570 PF01734 Patatin-like phospholipase VCA1004_RS04575 PF02887 Pyruvate kinase, alpha/beta domain VCA1004_RS04575 PF00224 Pyruvate kinase, barrel domain VCA1004_RS04580 PF00480 ROK family VCA1004_RS04585 PF00106 short chain dehydrogenase VCA1004_RS04590 PF01343 Peptidase family S49 VCA1004_RS04590 PF08496 Peptidase family S49 N-terminal VCA1004_RS04595 PF01226 Formate/nitrite transporter VCA1004_RS04600 PF10692 Protein of unknown function (DUF2498) VCA1004_RS04605 PF01131 DNA topoisomerase VCA1004_RS04605 PF08272 Topoisomerase I zinc-ribbon-like VCA1004_RS04605 PF01396 Topoisomerase DNA binding C4 zinc finger VCA1004_RS04605 PF01751 Toprim domain VCA1004_RS04610 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VCA1004_RS04630 PF03466 LysR substrate binding domain VCA1004_RS04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS04640 PF01037 Lrp/AsnC ligand binding domain VCA1004_RS04645 PF01580 FtsK/SpoIIIE family VCA1004_RS04645 PF09397 Ftsk gamma domain VCA1004_RS04645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VCA1004_RS04645 PF17854 FtsK alpha domain VCA1004_RS04650 PF03548 Outer membrane lipoprotein carrier protein LolA VCA1004_RS04655 PF12002 MgsA AAA+ ATPase C terminal VCA1004_RS04655 PF16193 AAA C-terminal domain VCA1004_RS04655 PF00004 ATPase family associated with various cellular activities (AAA) VCA1004_RS04660 PF02403 Seryl-tRNA synthetase N-terminal domain VCA1004_RS04660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCA1004_RS04665 PF13276 HTH-like domain VCA1004_RS04665 PF13333 Integrase core domain VCA1004_RS04665 PF00665 Integrase core domain VCA1004_RS04675 PF08443 RimK-like ATP-grasp domain VCA1004_RS04675 PF18030 RimK PreATP-grasp domain VCA1004_RS04680 PF00202 Aminotransferase class-III VCA1004_RS04685 PF04055 Radical SAM superfamily VCA1004_RS04685 PF06968 Biotin and Thiamin Synthesis associated domain VCA1004_RS04690 PF00155 Aminotransferase class I and II VCA1004_RS04695 PF08241 Methyltransferase domain VCA1004_RS04705 PF01435 Peptidase family M48 VCA1004_RS04710 PF10689 Protein of unknown function (DUF2496) VCA1004_RS04720 PF01925 Sulfite exporter TauE/SafE VCA1004_RS04725 PF06733 DEAD_2 VCA1004_RS04725 PF13307 Helicase C-terminal domain VCA1004_RS04730 PF13609 Gram-negative porin VCA1004_RS04735 PF00294 pfkB family carbohydrate kinase VCA1004_RS04740 PF00816 H-NS histone family VCA1004_RS04745 PF03553 Na+/H+ antiporter family VCA1004_RS04750 PF08029 HisG, C-terminal domain VCA1004_RS04750 PF01634 ATP phosphoribosyltransferase VCA1004_RS04755 PF00815 Histidinol dehydrogenase VCA1004_RS04760 PF00155 Aminotransferase class I and II VCA1004_RS04765 PF08645 Polynucleotide kinase 3 phosphatase VCA1004_RS04765 PF00475 Imidazoleglycerol-phosphate dehydratase VCA1004_RS04770 PF00117 Glutamine amidotransferase class-I VCA1004_RS04775 PF00977 Histidine biosynthesis protein VCA1004_RS04780 PF00977 Histidine biosynthesis protein VCA1004_RS04785 PF01502 Phosphoribosyl-AMP cyclohydrolase VCA1004_RS04785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VCA1004_RS04795 PF00529 HlyD membrane-fusion protein of T1SS VCA1004_RS04795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS04800 PF07690 Major Facilitator Superfamily VCA1004_RS04805 PF02810 SEC-C motif VCA1004_RS04810 PF00563 EAL domain VCA1004_RS04810 PF08668 HDOD domain VCA1004_RS04815 PF00149 Calcineurin-like phosphoesterase VCA1004_RS04820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCA1004_RS04825 PF01406 tRNA synthetases class I (C) catalytic domain VCA1004_RS04825 PF09190 DALR domain VCA1004_RS04830 PF00265 Thymidine kinase VCA1004_RS04845 PF08443 RimK-like ATP-grasp domain VCA1004_RS04845 PF18030 RimK PreATP-grasp domain VCA1004_RS04850 PF08003 Protein of unknown function (DUF1698) VCA1004_RS04855 PF13649 Methyltransferase domain VCA1004_RS04860 PF02938 GAD domain VCA1004_RS04860 PF00152 tRNA synthetases class II (D, K and N) VCA1004_RS04860 PF01336 OB-fold nucleic acid binding domain VCA1004_RS04865 PF02075 Crossover junction endodeoxyribonuclease RuvC VCA1004_RS04870 PF01330 RuvA N terminal domain VCA1004_RS04870 PF07499 RuvA, C-terminal domain VCA1004_RS04875 PF05491 RuvB C-terminal winged helix domain VCA1004_RS04875 PF05496 Holliday junction DNA helicase RuvB P-loop domain VCA1004_RS04875 PF17864 RuvB AAA lid domain VCA1004_RS04880 PF01654 Cytochrome bd terminal oxidase subunit I VCA1004_RS04885 PF02322 Cytochrome bd terminal oxidase subunit II VCA1004_RS04890 PF08173 Membrane bound YbgT-like protein VCA1004_RS04900 PF03061 Thioesterase superfamily VCA1004_RS04905 PF01618 MotA/TolQ/ExbB proton channel family VCA1004_RS04910 PF02472 Biopolymer transport protein ExbD/TolR VCA1004_RS04920 PF04052 TolB amino-terminal domain VCA1004_RS04920 PF07676 WD40-like Beta Propeller Repeat VCA1004_RS04925 PF00691 OmpA family VCA1004_RS04930 PF16331 TolA binding protein trimerisation VCA1004_RS04930 PF13174 Tetratricopeptide repeat VCA1004_RS04935 PF02445 Quinolinate synthetase A protein VCA1004_RS04945 PF00728 Glycosyl hydrolase family 20, catalytic domain VCA1004_RS04945 PF02838 Glycosyl hydrolase family 20, domain 2 VCA1004_RS04950 PF06610 L-alanine exporter VCA1004_RS04970 PF00849 RNA pseudouridylate synthase VCA1004_RS04975 PF10672 S-adenosylmethionine-dependent methyltransferase VCA1004_RS04975 PF17785 PUA-like domain VCA1004_RS04990 PF03795 YCII-related domain VCA1004_RS04995 PF03061 Thioesterase superfamily VCA1004_RS05000 PF04279 Intracellular septation protein A VCA1004_RS05005 PF00290 Tryptophan synthase alpha chain VCA1004_RS05010 PF00291 Pyridoxal-phosphate dependent enzyme VCA1004_RS05015 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VCA1004_RS05015 PF00218 Indole-3-glycerol phosphate synthase VCA1004_RS05020 PF02885 Glycosyl transferase family, helical bundle domain VCA1004_RS05020 PF00591 Glycosyl transferase family, a/b domain VCA1004_RS05025 PF00117 Glutamine amidotransferase class-I VCA1004_RS05030 PF04715 Anthranilate synthase component I, N terminal region VCA1004_RS05030 PF00425 chorismate binding enzyme VCA1004_RS05035 PF02811 PHP domain VCA1004_RS05040 PF01300 Telomere recombination VCA1004_RS05050 PF00849 RNA pseudouridylate synthase VCA1004_RS05050 PF01479 S4 domain VCA1004_RS05055 PF04269 Protein of unknown function, DUF440 VCA1004_RS05060 PF08207 Elongation factor P (EF-P) KOW-like domain VCA1004_RS05060 PF01132 Elongation factor P (EF-P) OB domain VCA1004_RS05060 PF09285 Elongation factor P, C-terminal VCA1004_RS05065 PF00136 DNA polymerase family B VCA1004_RS05065 PF03104 DNA polymerase family B, exonuclease domain VCA1004_RS05070 PF00196 Bacterial regulatory proteins, luxR family VCA1004_RS05070 PF00072 Response regulator receiver domain VCA1004_RS05075 PF01541 GIY-YIG catalytic domain VCA1004_RS05075 PF08459 UvrC Helix-hairpin-helix N-terminal VCA1004_RS05075 PF02151 UvrB/uvrC motif VCA1004_RS05080 PF01066 CDP-alcohol phosphatidyltransferase VCA1004_RS05115 PF01136 Peptidase family U32 VCA1004_RS05115 PF12392 Collagenase VCA1004_RS05120 PF11658 Cellulose biosynthesis protein BcsG VCA1004_RS05145 PF07238 PilZ domain VCA1004_RS05145 PF00535 Glycosyl transferase family 2 VCA1004_RS05145 PF03552 Cellulose synthase VCA1004_RS05150 PF03170 Bacterial cellulose synthase subunit VCA1004_RS05155 PF01270 Glycosyl hydrolases family 8 VCA1004_RS05160 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) VCA1004_RS05165 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS05165 PF07694 5TMR of 5TMR-LYT VCA1004_RS05170 PF05552 Conserved TM helix VCA1004_RS05170 PF00924 Mechanosensitive ion channel VCA1004_RS05175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VCA1004_RS05175 PF17810 Arginine decarboxylase helical bundle domain VCA1004_RS05175 PF17944 Arginine decarboxylase C-terminal helical extension VCA1004_RS05180 PF00491 Arginase family VCA1004_RS05195 PF04055 Radical SAM superfamily VCA1004_RS05195 PF11842 Domain of unknown function (DUF3362) VCA1004_RS05195 PF08497 Radical SAM N-terminal VCA1004_RS05220 PF03466 LysR substrate binding domain VCA1004_RS05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS05225 PF08267 Cobalamin-independent synthase, N-terminal domain VCA1004_RS05225 PF01717 Cobalamin-independent synthase, Catalytic domain VCA1004_RS05240 PF06945 Protein of unknown function (DUF1289) VCA1004_RS05250 PF01386 Ribosomal L25p family VCA1004_RS05255 PF04851 Type III restriction enzyme, res subunit VCA1004_RS05255 PF00271 Helicase conserved C-terminal domain VCA1004_RS05260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCA1004_RS05265 PF01479 S4 domain VCA1004_RS05265 PF00849 RNA pseudouridylate synthase VCA1004_RS05270 PF07690 Major Facilitator Superfamily VCA1004_RS05280 PF00005 ABC transporter VCA1004_RS05295 PF06965 Na+/H+ antiporter 1 VCA1004_RS05300 PF16295 Tetracyclin repressor-like, C-terminal domain VCA1004_RS05300 PF00440 Bacterial regulatory proteins, tetR family VCA1004_RS05305 PF02770 Acyl-CoA dehydrogenase, middle domain VCA1004_RS05305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VCA1004_RS05305 PF09317 Domain of unknown function (DUF1974) VCA1004_RS05305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VCA1004_RS05310 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCA1004_RS05310 PF07055 Enoyl reductase FAD binding domain VCA1004_RS05310 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCA1004_RS05320 PF17763 Glutaminase/Asparaginase C-terminal domain VCA1004_RS05320 PF00710 Asparaginase, N-terminal VCA1004_RS05325 PF02080 TrkA-C domain VCA1004_RS05325 PF06826 Predicted Permease Membrane Region VCA1004_RS05330 PF00462 Glutaredoxin VCA1004_RS05335 PF01380 SIS domain VCA1004_RS05335 PF01418 Helix-turn-helix domain, rpiR family VCA1004_RS05340 PF00282 Pyridoxal-dependent decarboxylase conserved domain VCA1004_RS05350 PF03956 Lysine exporter LysO VCA1004_RS05355 PF04993 TfoX N-terminal domain VCA1004_RS05355 PF04994 TfoX C-terminal domain VCA1004_RS05370 PF00266 Aminotransferase class-V VCA1004_RS05375 PF00664 ABC transporter transmembrane region VCA1004_RS05375 PF00005 ABC transporter VCA1004_RS05380 PF00664 ABC transporter transmembrane region VCA1004_RS05380 PF00005 ABC transporter VCA1004_RS05385 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS05395 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS05400 PF02698 DUF218 domain VCA1004_RS05405 PF03949 Malic enzyme, NAD binding domain VCA1004_RS05405 PF00390 Malic enzyme, N-terminal domain VCA1004_RS05425 PF07995 Glucose / Sorbosone dehydrogenase VCA1004_RS05430 PF01409 tRNA synthetases class II core domain (F) VCA1004_RS05430 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VCA1004_RS05435 PF03484 tRNA synthetase B5 domain VCA1004_RS05435 PF03483 B3/4 domain VCA1004_RS05435 PF01588 Putative tRNA binding domain VCA1004_RS05435 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VCA1004_RS05435 PF03147 Ferredoxin-fold anticodon binding domain VCA1004_RS05440 PF03918 Cytochrome C biogenesis protein VCA1004_RS05445 PF02335 Cytochrome c552 VCA1004_RS05455 PF13247 4Fe-4S dicluster domain VCA1004_RS05460 PF03916 Polysulphide reductase, NrfD VCA1004_RS05465 PF01578 Cytochrome C assembly protein VCA1004_RS05465 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VCA1004_RS05470 PF03918 Cytochrome C biogenesis protein VCA1004_RS05480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS05485 PF00216 Bacterial DNA-binding protein VCA1004_RS05490 PF05724 Thiopurine S-methyltransferase (TPMT) VCA1004_RS05495 PF02222 ATP-grasp domain VCA1004_RS05500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VCA1004_RS05500 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VCA1004_RS05505 PF04172 LrgB-like family VCA1004_RS05510 PF03788 LrgA family VCA1004_RS05515 PF08411 Exonuclease C-terminal VCA1004_RS05515 PF00929 Exonuclease VCA1004_RS05530 PF00271 Helicase conserved C-terminal domain VCA1004_RS05530 PF04408 Helicase associated domain (HA2) VCA1004_RS05530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VCA1004_RS05530 PF11898 Domain of unknown function (DUF3418) VCA1004_RS05530 PF00270 DEAD/DEAH box helicase VCA1004_RS05565 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VCA1004_RS05570 PF01810 LysE type translocator VCA1004_RS05580 PF04461 Protein of unknown function (DUF520) VCA1004_RS05585 PF00793 DAHP synthetase I family VCA1004_RS05610 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS05615 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VCA1004_RS05615 PF01189 16S rRNA methyltransferase RsmB/F VCA1004_RS05615 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VCA1004_RS05620 PF02470 MlaD protein VCA1004_RS05625 PF04403 Paraquat-inducible protein A VCA1004_RS05630 PF00664 ABC transporter transmembrane region VCA1004_RS05630 PF00005 ABC transporter VCA1004_RS05635 PF13185 GAF domain VCA1004_RS05640 PF17516 ProQ C-terminal domain VCA1004_RS05640 PF04352 ProQ/FINO family VCA1004_RS05645 PF00595 PDZ domain VCA1004_RS05645 PF17804 Tail specific protease N-terminal domain VCA1004_RS05645 PF03572 Peptidase family S41 VCA1004_RS05645 PF11818 C-terminal domain of tail specific protease (DUF3340) VCA1004_RS05655 PF11940 Domain of unknown function (DUF3458) Ig-like fold VCA1004_RS05655 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VCA1004_RS05655 PF01433 Peptidase family M1 domain VCA1004_RS05660 PF05088 Bacterial NAD-glutamate dehydrogenase VCA1004_RS05665 PF01180 Dihydroorotate dehydrogenase VCA1004_RS05670 PF07126 Cell-division protein ZapC VCA1004_RS05675 PF01170 Putative RNA methylase family UPF0020 VCA1004_RS05675 PF10672 S-adenosylmethionine-dependent methyltransferase VCA1004_RS05675 PF02926 THUMP domain VCA1004_RS05685 PF12848 ABC transporter VCA1004_RS05685 PF16326 ABC transporter C-terminal domain VCA1004_RS05685 PF00005 ABC transporter VCA1004_RS05695 PF04957 Ribosome modulation factor VCA1004_RS05700 PF07977 FabA-like domain VCA1004_RS05705 PF13654 AAA domain VCA1004_RS05705 PF05362 Lon protease (S16) C-terminal proteolytic domain VCA1004_RS05710 PF06303 MatP N-terminal domain VCA1004_RS05710 PF17414 MatP C-terminal ribbon-helix-helix domain VCA1004_RS05725 PF01554 MatE VCA1004_RS05730 PF01253 Translation initiation factor SUI1 VCA1004_RS05740 PF07478 D-ala D-ala ligase C-terminus VCA1004_RS05740 PF01820 D-ala D-ala ligase N-terminus VCA1004_RS05750 PF13380 CoA binding domain VCA1004_RS05750 PF00583 Acetyltransferase (GNAT) family VCA1004_RS05750 PF13607 Succinyl-CoA ligase like flavodoxin domain VCA1004_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS05755 PF03466 LysR substrate binding domain VCA1004_RS05760 PF04886 PT repeat VCA1004_RS05760 PF07715 TonB-dependent Receptor Plug Domain VCA1004_RS05760 PF00593 TonB dependent receptor VCA1004_RS05765 PF16363 GDP-mannose 4,6 dehydratase VCA1004_RS05770 PF03746 LamB/YcsF family VCA1004_RS05775 PF04055 Radical SAM superfamily VCA1004_RS05790 PF04143 Sulphur transport VCA1004_RS05795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VCA1004_RS05795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VCA1004_RS05800 PF00085 Thioredoxin VCA1004_RS05805 PF07690 Major Facilitator Superfamily VCA1004_RS05810 PF04055 Radical SAM superfamily VCA1004_RS05815 PF01242 6-pyruvoyl tetrahydropterin synthase VCA1004_RS05830 PF03091 CutA1 divalent ion tolerance protein VCA1004_RS05835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS05835 PF12793 Sugar transport-related sRNA regulator N-term VCA1004_RS05845 PF03061 Thioesterase superfamily VCA1004_RS05850 PF01435 Peptidase family M48 VCA1004_RS05855 PF01243 Pyridoxamine 5'-phosphate oxidase VCA1004_RS05860 PF06228 Haem utilisation ChuX/HutX VCA1004_RS05865 PF03544 Gram-negative bacterial TonB protein C-terminal VCA1004_RS05870 PF01618 MotA/TolQ/ExbB proton channel family VCA1004_RS05875 PF02472 Biopolymer transport protein ExbD/TolR VCA1004_RS05885 PF01032 FecCD transport family VCA1004_RS05890 PF00005 ABC transporter VCA1004_RS05910 PF01467 Cytidylyltransferase-like VCA1004_RS05915 PF02540 NAD synthase VCA1004_RS05920 PF04264 YceI-like domain VCA1004_RS05925 PF01292 Prokaryotic cytochrome b561 VCA1004_RS05930 PF00174 Oxidoreductase molybdopterin binding domain VCA1004_RS05935 PF01794 Ferric reductase like transmembrane component VCA1004_RS05950 PF01575 MaoC like domain VCA1004_RS05965 PF05762 VWA domain containing CoxE-like protein VCA1004_RS05970 PF07728 AAA domain (dynein-related subfamily) VCA1004_RS05970 PF17868 AAA lid domain VCA1004_RS05970 PF12592 Protein of unknown function (DUF3763) VCA1004_RS05980 PF01212 Beta-eliminating lyase VCA1004_RS05990 PF00271 Helicase conserved C-terminal domain VCA1004_RS05990 PF00270 DEAD/DEAH box helicase VCA1004_RS05995 PF04336 Acyl carrier protein phosphodiesterase VCA1004_RS06000 PF13419 Haloacid dehalogenase-like hydrolase VCA1004_RS06025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VCA1004_RS06025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VCA1004_RS06030 PF13419 Haloacid dehalogenase-like hydrolase VCA1004_RS06035 PF00472 RF-1 domain VCA1004_RS06040 PF01227 GTP cyclohydrolase I VCA1004_RS06045 PF03453 MoeA N-terminal region (domain I and II) VCA1004_RS06045 PF00994 Probable molybdopterin binding domain VCA1004_RS06045 PF03454 MoeA C-terminal region (domain IV) VCA1004_RS06050 PF03741 Integral membrane protein TerC family VCA1004_RS06055 PF02872 5'-nucleotidase, C-terminal domain VCA1004_RS06055 PF00149 Calcineurin-like phosphoesterase VCA1004_RS06060 PF11398 Protein of unknown function (DUF2813) VCA1004_RS06070 PF00403 Heavy-metal-associated domain VCA1004_RS06075 PF02378 Phosphotransferase system, EIIC VCA1004_RS06075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCA1004_RS06075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS06080 PF00381 PTS HPr component phosphorylation site VCA1004_RS06080 PF02896 PEP-utilising enzyme, TIM barrel domain VCA1004_RS06080 PF00391 PEP-utilising enzyme, mobile domain VCA1004_RS06080 PF05524 PEP-utilising enzyme, N-terminal VCA1004_RS06080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS06085 PF12833 Helix-turn-helix domain VCA1004_RS06090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCA1004_RS06090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS06095 PF01238 Phosphomannose isomerase type I VCA1004_RS06100 PF00005 ABC transporter VCA1004_RS06100 PF12848 ABC transporter VCA1004_RS06110 PF13276 HTH-like domain VCA1004_RS06110 PF00665 Integrase core domain VCA1004_RS06110 PF13333 Integrase core domain VCA1004_RS06120 PF00871 Acetokinase family VCA1004_RS06125 PF12343 Cold shock protein DEAD box A VCA1004_RS06125 PF00270 DEAD/DEAH box helicase VCA1004_RS06125 PF00271 Helicase conserved C-terminal domain VCA1004_RS06125 PF03880 DbpA RNA binding domain VCA1004_RS06130 PF00575 S1 RNA binding domain VCA1004_RS06130 PF00773 RNB domain VCA1004_RS06130 PF08206 Ribonuclease B OB domain VCA1004_RS06130 PF17876 Cold shock domain VCA1004_RS06140 PF12849 PBP superfamily domain VCA1004_RS06150 PF03831 PhnA domain VCA1004_RS06150 PF08274 PhnA Zinc-Ribbon VCA1004_RS06165 PF00158 Sigma-54 interaction domain VCA1004_RS06165 PF18024 Helix-turn-helix domain VCA1004_RS06170 PF05128 Domain of unknown function (DUF697) VCA1004_RS06175 PF04317 YcjX-like family, DUF463 VCA1004_RS06190 PF04715 Anthranilate synthase component I, N terminal region VCA1004_RS06190 PF00425 chorismate binding enzyme VCA1004_RS06195 PF00293 NUDIX domain VCA1004_RS06200 PF03222 Tryptophan/tyrosine permease family VCA1004_RS06205 PF03313 Serine dehydratase alpha chain VCA1004_RS06205 PF03315 Serine dehydratase beta chain VCA1004_RS06210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCA1004_RS06210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCA1004_RS06215 PF01042 Endoribonuclease L-PSP VCA1004_RS06225 PF01336 OB-fold nucleic acid binding domain VCA1004_RS06225 PF00152 tRNA synthetases class II (D, K and N) VCA1004_RS06230 PF03741 Integral membrane protein TerC family VCA1004_RS06235 PF07690 Major Facilitator Superfamily VCA1004_RS06245 PF00155 Aminotransferase class I and II VCA1004_RS06250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCA1004_RS06250 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS06265 PF02028 BCCT, betaine/carnitine/choline family transporter VCA1004_RS06280 PF00753 Metallo-beta-lactamase superfamily VCA1004_RS06290 PF00925 GTP cyclohydrolase II VCA1004_RS06295 PF00521 DNA gyrase/topoisomerase IV, subunit A VCA1004_RS06295 PF03989 DNA gyrase C-terminal domain, beta-propeller VCA1004_RS06305 PF03477 ATP cone domain VCA1004_RS06305 PF02867 Ribonucleotide reductase, barrel domain VCA1004_RS06305 PF00317 Ribonucleotide reductase, all-alpha domain VCA1004_RS06310 PF00268 Ribonucleotide reductase, small chain VCA1004_RS06325 PF00994 Probable molybdopterin binding domain VCA1004_RS06345 PF03435 Saccharopine dehydrogenase NADP binding domain VCA1004_RS06345 PF16653 Saccharopine dehydrogenase C-terminal domain VCA1004_RS06350 PF00202 Aminotransferase class-III VCA1004_RS06355 PF00501 AMP-binding enzyme VCA1004_RS06370 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB VCA1004_RS06370 PF17287 POTRA domain VCA1004_RS06370 PF08479 POTRA domain, ShlB-type VCA1004_RS06375 PF00209 Sodium:neurotransmitter symporter family VCA1004_RS06380 PF13396 Phospholipase_D-nuclease N-terminal VCA1004_RS06380 PF13091 PLD-like domain VCA1004_RS06385 PF01053 Cys/Met metabolism PLP-dependent enzyme VCA1004_RS06390 PF00892 EamA-like transporter family VCA1004_RS06410 PF03352 Methyladenine glycosylase VCA1004_RS06415 PF04024 PspC domain VCA1004_RS06420 PF06667 Phage shock protein B VCA1004_RS06425 PF04012 PspA/IM30 family VCA1004_RS06430 PF00158 Sigma-54 interaction domain VCA1004_RS06430 PF02954 Bacterial regulatory protein, Fis family VCA1004_RS06435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS06440 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS06445 PF12911 N-terminal TM domain of oligopeptide transport permease C VCA1004_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS06450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS06450 PF00005 ABC transporter VCA1004_RS06455 PF00005 ABC transporter VCA1004_RS06460 PF02954 Bacterial regulatory protein, Fis family VCA1004_RS06460 PF00158 Sigma-54 interaction domain VCA1004_RS06460 PF00072 Response regulator receiver domain VCA1004_RS06465 PF00939 Sodium:sulfate symporter transmembrane region VCA1004_RS06475 PF01368 DHH family VCA1004_RS06475 PF02833 DHHA2 domain VCA1004_RS06495 PF03466 LysR substrate binding domain VCA1004_RS06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS06500 PF16330 MukB hinge domain VCA1004_RS06500 PF04310 MukB N-terminal VCA1004_RS06505 PF04288 MukE-like family VCA1004_RS06510 PF17193 MukF C-terminal domain VCA1004_RS06510 PF17192 MukF middle domain VCA1004_RS06510 PF03882 MukF winged-helix domain VCA1004_RS06515 PF13847 Methyltransferase domain VCA1004_RS06520 PF02698 DUF218 domain VCA1004_RS06525 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS06530 PF13416 Bacterial extracellular solute-binding protein VCA1004_RS06535 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS06540 PF00005 ABC transporter VCA1004_RS06545 PF01066 CDP-alcohol phosphatidyltransferase VCA1004_RS06555 PF00561 alpha/beta hydrolase fold VCA1004_RS06560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VCA1004_RS06565 PF18073 Rubredoxin metal binding domain VCA1004_RS06570 PF06305 Lipopolysaccharide assembly protein A domain VCA1004_RS06575 PF00216 Bacterial DNA-binding protein VCA1004_RS06580 PF00575 S1 RNA binding domain VCA1004_RS06585 PF02224 Cytidylate kinase VCA1004_RS06590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCA1004_RS06595 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VCA1004_RS06600 PF04377 Arginine-tRNA-protein transferase, C terminus VCA1004_RS06600 PF04376 Arginine-tRNA-protein transferase, N terminus VCA1004_RS06605 PF01176 Translation initiation factor 1A / IF-1 VCA1004_RS06610 PF17871 AAA lid domain VCA1004_RS06610 PF02861 Clp amino terminal domain, pathogenicity island component VCA1004_RS06610 PF10431 C-terminal, D2-small domain, of ClpB protein VCA1004_RS06610 PF07724 AAA domain (Cdc48 subfamily) VCA1004_RS06610 PF00004 ATPase family associated with various cellular activities (AAA) VCA1004_RS06615 PF02617 ATP-dependent Clp protease adaptor protein ClpS VCA1004_RS06620 PF00313 'Cold-shock' DNA-binding domain VCA1004_RS06625 PF03971 Monomeric isocitrate dehydrogenase VCA1004_RS06630 PF00849 RNA pseudouridylate synthase VCA1004_RS06640 PF04356 Protein of unknown function (DUF489) VCA1004_RS06645 PF08328 Adenylosuccinate lyase C-terminal VCA1004_RS06645 PF00206 Lyase VCA1004_RS06655 PF08007 Cupin superfamily protein VCA1004_RS06660 PF03372 Endonuclease/Exonuclease/phosphatase family VCA1004_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS06675 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS06680 PF00005 ABC transporter VCA1004_RS06685 PF01228 Glycine radical VCA1004_RS06685 PF02901 Pyruvate formate lyase-like VCA1004_RS06690 PF04055 Radical SAM superfamily VCA1004_RS06695 PF03887 YfbU domain VCA1004_RS06700 PF06798 PrkA serine protein kinase C-terminal domain VCA1004_RS06700 PF08298 PrkA AAA domain VCA1004_RS06705 PF04285 Protein of unknown function (DUF444) VCA1004_RS06710 PF04293 SpoVR like protein VCA1004_RS06720 PF00394 Multicopper oxidase VCA1004_RS06720 PF07732 Multicopper oxidase VCA1004_RS06720 PF07731 Multicopper oxidase VCA1004_RS06725 PF00293 NUDIX domain VCA1004_RS06760 PF02348 Cytidylyltransferase VCA1004_RS06765 PF03966 Trm112p-like protein VCA1004_RS06770 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VCA1004_RS06775 PF00005 ABC transporter VCA1004_RS06775 PF00664 ABC transporter transmembrane region VCA1004_RS06780 PF03772 Competence protein VCA1004_RS06780 PF13567 Domain of unknown function (DUF4131) VCA1004_RS06780 PF00753 Metallo-beta-lactamase superfamily VCA1004_RS06790 PF12704 MacB-like periplasmic core domain VCA1004_RS06790 PF02687 FtsX-like permease family VCA1004_RS06795 PF00005 ABC transporter VCA1004_RS06800 PF02687 FtsX-like permease family VCA1004_RS06800 PF12704 MacB-like periplasmic core domain VCA1004_RS06805 PF17757 UvrB interaction domain VCA1004_RS06805 PF03461 TRCF domain VCA1004_RS06805 PF00271 Helicase conserved C-terminal domain VCA1004_RS06805 PF00270 DEAD/DEAH box helicase VCA1004_RS06805 PF02559 CarD-like/TRCF domain VCA1004_RS06820 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS06825 PF05728 Uncharacterised protein family (UPF0227) VCA1004_RS06835 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VCA1004_RS06835 PF13036 Peptidoglycan-synthase activator LpoB VCA1004_RS06850 PF01230 HIT domain VCA1004_RS06860 PF01048 Phosphorylase superfamily VCA1004_RS06865 PF01743 Poly A polymerase head domain VCA1004_RS06865 PF00571 CBS domain VCA1004_RS06870 PF00583 Acetyltransferase (GNAT) family VCA1004_RS06870 PF00795 Carbon-nitrogen hydrolase VCA1004_RS06875 PF07690 Major Facilitator Superfamily VCA1004_RS06880 PF00563 EAL domain VCA1004_RS06880 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS06880 PF03707 Bacterial signalling protein N terminal repeat VCA1004_RS06885 PF01734 Patatin-like phospholipase VCA1004_RS06890 PF00892 EamA-like transporter family VCA1004_RS06900 PF01145 SPFH domain / Band 7 family VCA1004_RS06910 PF01641 SelR domain VCA1004_RS06910 PF01625 Peptide methionine sulfoxide reductase VCA1004_RS06920 PF13302 Acetyltransferase (GNAT) domain VCA1004_RS06925 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VCA1004_RS06945 PF11799 impB/mucB/samB family C-terminal domain VCA1004_RS06945 PF13438 Domain of unknown function (DUF4113) VCA1004_RS06945 PF00817 impB/mucB/samB family VCA1004_RS06955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VCA1004_RS06970 PF13404 AsnC-type helix-turn-helix domain VCA1004_RS06970 PF01037 Lrp/AsnC ligand binding domain VCA1004_RS06975 PF00291 Pyridoxal-phosphate dependent enzyme VCA1004_RS06985 PF00873 AcrB/AcrD/AcrF family VCA1004_RS06990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS07020 PF00860 Permease family VCA1004_RS07025 PF01979 Amidohydrolase family VCA1004_RS07030 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCA1004_RS07040 PF13409 Glutathione S-transferase, N-terminal domain VCA1004_RS07050 PF00232 Glycosyl hydrolase family 1 VCA1004_RS07055 PF00480 ROK family VCA1004_RS07060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS07060 PF00005 ABC transporter VCA1004_RS07065 PF00005 ABC transporter VCA1004_RS07065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS07070 PF12911 N-terminal TM domain of oligopeptide transport permease C VCA1004_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS07080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS07085 PF00704 Glycosyl hydrolases family 18 VCA1004_RS07085 PF08329 Chitinase A, N-terminal domain VCA1004_RS07090 PF02391 MoaE protein VCA1004_RS07095 PF02597 ThiS family VCA1004_RS07100 PF01967 MoaC family VCA1004_RS07105 PF00994 Probable molybdopterin binding domain VCA1004_RS07110 PF06463 Molybdenum Cofactor Synthesis C VCA1004_RS07110 PF04055 Radical SAM superfamily VCA1004_RS07115 PF01933 Uncharacterised protein family UPF0052 VCA1004_RS07120 PF12344 Ultra-violet resistance protein B VCA1004_RS07120 PF00271 Helicase conserved C-terminal domain VCA1004_RS07120 PF17757 UvrB interaction domain VCA1004_RS07120 PF04851 Type III restriction enzyme, res subunit VCA1004_RS07120 PF02151 UvrB/uvrC motif VCA1004_RS07130 PF02508 Rnf-Nqr subunit, membrane protein VCA1004_RS07135 PF04060 Putative Fe-S cluster VCA1004_RS07140 PF12838 4Fe-4S dicluster domain VCA1004_RS07140 PF13375 RnfC Barrel sandwich hybrid domain VCA1004_RS07140 PF10531 SLBB domain VCA1004_RS07140 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VCA1004_RS07145 PF03116 NQR2, RnfD, RnfE family VCA1004_RS07150 PF04205 FMN-binding domain VCA1004_RS07155 PF02508 Rnf-Nqr subunit, membrane protein VCA1004_RS07160 PF10576 Iron-sulfur binding domain of endonuclease III VCA1004_RS07160 PF00633 Helix-hairpin-helix motif VCA1004_RS07160 PF00730 HhH-GPD superfamily base excision DNA repair protein VCA1004_RS07165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VCA1004_RS07170 PF00929 Exonuclease VCA1004_RS07175 PF03553 Na+/H+ antiporter family VCA1004_RS07175 PF13726 Na+-H+ antiporter family VCA1004_RS07185 PF00462 Glutaredoxin VCA1004_RS07190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VCA1004_RS07190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VCA1004_RS07200 PF00465 Iron-containing alcohol dehydrogenase VCA1004_RS07200 PF00171 Aldehyde dehydrogenase family VCA1004_RS07205 PF01914 MarC family integral membrane protein VCA1004_RS07210 PF00027 Cyclic nucleotide-binding domain VCA1004_RS07210 PF00520 Ion transport protein VCA1004_RS07215 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCA1004_RS07215 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCA1004_RS07220 PF04245 37-kD nucleoid-associated bacterial protein VCA1004_RS07225 PF07208 Protein of unknown function (DUF1414) VCA1004_RS07230 PF00884 Sulfatase VCA1004_RS07230 PF11893 Domain of unknown function (DUF3413) VCA1004_RS07245 PF00857 Isochorismatase family VCA1004_RS07250 PF02885 Glycosyl transferase family, helical bundle domain VCA1004_RS07250 PF00591 Glycosyl transferase family, a/b domain VCA1004_RS07260 PF01131 DNA topoisomerase VCA1004_RS07260 PF01751 Toprim domain VCA1004_RS07265 PF00881 Nitroreductase family VCA1004_RS07270 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS07270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCA1004_RS07275 PF01343 Peptidase family S49 VCA1004_RS07280 PF00710 Asparaginase, N-terminal VCA1004_RS07280 PF17763 Glutaminase/Asparaginase C-terminal domain VCA1004_RS07285 PF07023 Protein of unknown function (DUF1315) VCA1004_RS07290 PF01641 SelR domain VCA1004_RS07295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCA1004_RS07295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCA1004_RS07300 PF01263 Aldose 1-epimerase VCA1004_RS07305 PF13847 Methyltransferase domain VCA1004_RS07310 PF04231 Endonuclease I VCA1004_RS07325 PF03692 Putative zinc- or iron-chelating domain VCA1004_RS07330 PF03692 Putative zinc- or iron-chelating domain VCA1004_RS07335 PF13662 Toprim domain VCA1004_RS07335 PF02132 RecR protein VCA1004_RS07340 PF02575 YbaB/EbfC DNA-binding family VCA1004_RS07345 PF12170 DNA polymerase III tau subunit V interacting with alpha VCA1004_RS07345 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VCA1004_RS07345 PF12169 DNA polymerase III subunits gamma and tau domain III VCA1004_RS07350 PF00156 Phosphoribosyl transferase domain VCA1004_RS07355 PF04304 Protein of unknown function (DUF454) VCA1004_RS07360 PF00072 Response regulator receiver domain VCA1004_RS07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS07365 PF03466 LysR substrate binding domain VCA1004_RS07370 PF00156 Phosphoribosyl transferase domain VCA1004_RS07375 PF02674 Colicin V production protein VCA1004_RS07380 PF05036 Sporulation related domain VCA1004_RS07385 PF08245 Mur ligase middle domain VCA1004_RS07385 PF02875 Mur ligase family, glutamate ligase domain VCA1004_RS07390 PF17848 Acetyl-coA carboxylase zinc finger domain VCA1004_RS07390 PF01039 Carboxyl transferase domain VCA1004_RS07395 PF01416 tRNA pseudouridine synthase VCA1004_RS07405 PF01118 Semialdehyde dehydrogenase, NAD binding domain VCA1004_RS07405 PF02774 Semialdehyde dehydrogenase, dimerisation domain VCA1004_RS07410 PF11890 Domain of unknown function (DUF3410) VCA1004_RS07410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCA1004_RS07410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCA1004_RS07415 PF00109 Beta-ketoacyl synthase, N-terminal domain VCA1004_RS07415 PF02801 Beta-ketoacyl synthase, C-terminal domain VCA1004_RS07420 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VCA1004_RS07420 PF01266 FAD dependent oxidoreductase VCA1004_RS07430 PF08891 YfcL protein VCA1004_RS07435 PF04315 Elongation factor P hydroxylase VCA1004_RS07440 PF03458 UPF0126 domain VCA1004_RS07445 PF01264 Chorismate synthase VCA1004_RS07450 PF05175 Methyltransferase small domain VCA1004_RS07455 PF01713 Smr domain VCA1004_RS07460 PF00300 Histidine phosphatase superfamily (branch 1) VCA1004_RS07465 PF00675 Insulinase (Peptidase family M16) VCA1004_RS07465 PF05193 Peptidase M16 inactive domain VCA1004_RS07470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VCA1004_RS07470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VCA1004_RS07470 PF00378 Enoyl-CoA hydratase/isomerase VCA1004_RS07475 PF02803 Thiolase, C-terminal domain VCA1004_RS07475 PF00108 Thiolase, N-terminal domain VCA1004_RS07480 PF04542 Sigma-70 region 2 VCA1004_RS07480 PF08281 Sigma-70, region 4 VCA1004_RS07490 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCA1004_RS07495 PF04333 MlaA lipoprotein VCA1004_RS07505 PF03918 Cytochrome C biogenesis protein VCA1004_RS07510 PF08534 Redoxin VCA1004_RS07515 PF01578 Cytochrome C assembly protein VCA1004_RS07515 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VCA1004_RS07520 PF03100 CcmE VCA1004_RS07530 PF01578 Cytochrome C assembly protein VCA1004_RS07535 PF03379 CcmB protein VCA1004_RS07540 PF00005 ABC transporter VCA1004_RS07550 PF00875 DNA photolyase VCA1004_RS07550 PF03441 FAD binding domain of DNA photolyase VCA1004_RS07555 PF10011 Predicted membrane protein (DUF2254) VCA1004_RS07565 PF00005 ABC transporter VCA1004_RS07565 PF00664 ABC transporter transmembrane region VCA1004_RS07570 PF00593 TonB dependent receptor VCA1004_RS07570 PF07715 TonB-dependent Receptor Plug Domain VCA1004_RS07575 PF00005 ABC transporter VCA1004_RS07580 PF01497 Periplasmic binding protein VCA1004_RS07585 PF01032 FecCD transport family VCA1004_RS07590 PF00691 OmpA family VCA1004_RS07590 PF01389 OmpA-like transmembrane domain VCA1004_RS07595 PF00005 ABC transporter VCA1004_RS07595 PF12848 ABC transporter VCA1004_RS07605 PF00012 Hsp70 protein VCA1004_RS07615 PF00593 TonB dependent receptor VCA1004_RS07615 PF07715 TonB-dependent Receptor Plug Domain VCA1004_RS07620 PF12833 Helix-turn-helix domain VCA1004_RS07635 PF02472 Biopolymer transport protein ExbD/TolR VCA1004_RS07640 PF01618 MotA/TolQ/ExbB proton channel family VCA1004_RS07645 PF01618 MotA/TolQ/ExbB proton channel family VCA1004_RS07655 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCA1004_RS07660 PF03573 outer membrane porin, OprD family VCA1004_RS07665 PF00403 Heavy-metal-associated domain VCA1004_RS07675 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS07675 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VCA1004_RS07675 PF13247 4Fe-4S dicluster domain VCA1004_RS07690 PF01713 Smr domain VCA1004_RS07695 PF00849 RNA pseudouridylate synthase VCA1004_RS07695 PF01479 S4 domain VCA1004_RS07775 PF04073 Aminoacyl-tRNA editing domain VCA1004_RS07780 PF02872 5'-nucleotidase, C-terminal domain VCA1004_RS07780 PF00149 Calcineurin-like phosphoesterase VCA1004_RS07785 PF00793 DAHP synthetase I family VCA1004_RS07790 PF13369 Transglutaminase-like superfamily VCA1004_RS07795 PF04247 Invasion gene expression up-regulator, SirB VCA1004_RS07800 PF13847 Methyltransferase domain VCA1004_RS07800 PF17827 PrmC N-terminal domain VCA1004_RS07805 PF00472 RF-1 domain VCA1004_RS07805 PF03462 PCRF domain VCA1004_RS07810 PF01488 Shikimate / quinate 5-dehydrogenase VCA1004_RS07810 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VCA1004_RS07810 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VCA1004_RS07815 PF03550 Outer membrane lipoprotein LolB VCA1004_RS07820 PF00288 GHMP kinases N terminal domain VCA1004_RS07820 PF08544 GHMP kinases C terminal VCA1004_RS07825 PF14572 Phosphoribosyl synthetase-associated domain VCA1004_RS07825 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VCA1004_RS07830 PF01195 Peptidyl-tRNA hydrolase VCA1004_RS07835 PF01926 50S ribosome-binding GTPase VCA1004_RS07835 PF06071 Protein of unknown function (DUF933) VCA1004_RS07895 PF10282 Lactonase, 7-bladed beta-propeller VCA1004_RS07900 PF01494 FAD binding domain VCA1004_RS07905 PF01938 TRAM domain VCA1004_RS07905 PF04055 Radical SAM superfamily VCA1004_RS07905 PF00919 Uncharacterized protein family UPF0004 VCA1004_RS07910 PF02562 PhoH-like protein VCA1004_RS07915 PF02130 Uncharacterized protein family UPF0054 VCA1004_RS07920 PF00571 CBS domain VCA1004_RS07920 PF03471 Transporter associated domain VCA1004_RS07925 PF00795 Carbon-nitrogen hydrolase VCA1004_RS07930 PF00939 Sodium:sulfate symporter transmembrane region VCA1004_RS07935 PF07687 Peptidase dimerisation domain VCA1004_RS07935 PF01546 Peptidase family M20/M25/M40 VCA1004_RS07940 PF03606 C4-dicarboxylate anaerobic carrier VCA1004_RS07945 PF07295 Zinc-ribbon containing domain VCA1004_RS07950 PF13603 Leucyl-tRNA synthetase, Domain 2 VCA1004_RS07950 PF08264 Anticodon-binding domain of tRNA VCA1004_RS07950 PF00133 tRNA synthetases class I (I, L, M and V) VCA1004_RS07955 PF04390 Lipopolysaccharide-assembly VCA1004_RS07960 PF06144 DNA polymerase III, delta subunit VCA1004_RS07960 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VCA1004_RS07970 PF02590 Predicted SPOUT methyltransferase VCA1004_RS07975 PF03717 Penicillin-binding Protein dimerisation domain VCA1004_RS07975 PF00905 Penicillin binding protein transpeptidase domain VCA1004_RS07980 PF01098 Cell cycle protein VCA1004_RS07985 PF05036 Sporulation related domain VCA1004_RS07985 PF03330 Lytic transglycolase VCA1004_RS07990 PF07943 Penicillin-binding protein 5, C-terminal domain VCA1004_RS07990 PF00768 D-alanyl-D-alanine carboxypeptidase VCA1004_RS07995 PF04359 Protein of unknown function (DUF493) VCA1004_RS08000 PF03099 Biotin/lipoate A/B protein ligase family VCA1004_RS08005 PF04055 Radical SAM superfamily VCA1004_RS08005 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VCA1004_RS08010 PF00171 Aldehyde dehydrogenase family VCA1004_RS08015 PF00696 Amino acid kinase family VCA1004_RS08015 PF01472 PUA domain VCA1004_RS08020 PF07417 Sigma factor-binding transcriptional regulator Crl VCA1004_RS08025 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VCA1004_RS08035 PF00156 Phosphoribosyl transferase domain VCA1004_RS08040 PF00860 Permease family VCA1004_RS08045 PF01546 Peptidase family M20/M25/M40 VCA1004_RS08045 PF07687 Peptidase dimerisation domain VCA1004_RS08050 PF00817 impB/mucB/samB family VCA1004_RS08050 PF11798 IMS family HHH motif VCA1004_RS08050 PF11799 impB/mucB/samB family C-terminal domain VCA1004_RS08060 PF02424 ApbE family VCA1004_RS08065 PF00970 Oxidoreductase FAD-binding domain VCA1004_RS08065 PF00111 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS08065 PF00175 Oxidoreductase NAD-binding domain VCA1004_RS08070 PF02508 Rnf-Nqr subunit, membrane protein VCA1004_RS08075 PF02508 Rnf-Nqr subunit, membrane protein VCA1004_RS08080 PF04205 FMN-binding domain VCA1004_RS08085 PF03116 NQR2, RnfD, RnfE family VCA1004_RS08090 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VCA1004_RS08090 PF11973 NQRA C-terminal domain VCA1004_RS08095 PF01722 BolA-like protein VCA1004_RS08100 PF05175 Methyltransferase small domain VCA1004_RS08110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VCA1004_RS08115 PF07690 Major Facilitator Superfamily VCA1004_RS08120 PF03502 Nucleoside-specific channel-forming protein, Tsx VCA1004_RS08125 PF02558 Ketopantoate reductase PanE/ApbA VCA1004_RS08125 PF08546 Ketopantoate reductase PanE/ApbA C terminal VCA1004_RS08130 PF00266 Aminotransferase class-V VCA1004_RS08145 PF02657 Fe-S metabolism associated domain VCA1004_RS08150 PF00899 ThiF family VCA1004_RS08155 PF03562 MltA specific insert domain VCA1004_RS08155 PF06725 3D domain VCA1004_RS08160 PF00696 Amino acid kinase family VCA1004_RS08160 PF00583 Acetyltransferase (GNAT) family VCA1004_RS08165 PF04074 YhcH/YjgK/YiaL VCA1004_RS08170 PF13538 UvrD-like helicase C-terminal domain VCA1004_RS08175 PF12705 PD-(D/E)XK nuclease superfamily VCA1004_RS08175 PF00580 UvrD/REP helicase N-terminal domain VCA1004_RS08175 PF13361 UvrD-like helicase C-terminal domain VCA1004_RS08180 PF17946 RecC C-terminal domain VCA1004_RS08190 PF03466 LysR substrate binding domain VCA1004_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS08195 PF07130 YebG protein VCA1004_RS08200 PF01184 GPR1/FUN34/yaaH family VCA1004_RS08205 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VCA1004_RS08205 PF14602 Hexapeptide repeat of succinyl-transferase VCA1004_RS08210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VCA1004_RS08210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VCA1004_RS08215 PF05651 Putative sugar diacid recognition VCA1004_RS08215 PF17853 GGDEF-like domain VCA1004_RS08215 PF13556 PucR C-terminal helix-turn-helix domain VCA1004_RS08220 PF02595 Glycerate kinase family VCA1004_RS08225 PF00501 AMP-binding enzyme VCA1004_RS08230 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VCA1004_RS08235 PF07969 Amidohydrolase family VCA1004_RS08240 PF09905 DNA-binding protein VF530 VCA1004_RS08245 PF03764 Elongation factor G, domain IV VCA1004_RS08245 PF00679 Elongation factor G C-terminus VCA1004_RS08245 PF03144 Elongation factor Tu domain 2 VCA1004_RS08245 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS08245 PF14492 Elongation Factor G, domain II VCA1004_RS08250 PF00912 Transglycosylase VCA1004_RS08260 PF18073 Rubredoxin metal binding domain VCA1004_RS08265 PF18429 Domain of unknown function (DUF5609) VCA1004_RS08275 PF01048 Phosphorylase superfamily VCA1004_RS08280 PF01676 Metalloenzyme superfamily VCA1004_RS08285 PF00591 Glycosyl transferase family, a/b domain VCA1004_RS08285 PF02885 Glycosyl transferase family, helical bundle domain VCA1004_RS08285 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VCA1004_RS08290 PF01791 DeoC/LacD family aldolase VCA1004_RS08295 PF07670 Nucleoside recognition VCA1004_RS08295 PF07662 Na+ dependent nucleoside transporter C-terminus VCA1004_RS08295 PF01773 Na+ dependent nucleoside transporter N-terminus VCA1004_RS08300 PF01026 TatD related DNase VCA1004_RS08305 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS08305 PF16658 Class II release factor RF3, C-terminal domain VCA1004_RS08305 PF03144 Elongation factor Tu domain 2 VCA1004_RS08310 PF00583 Acetyltransferase (GNAT) family VCA1004_RS08325 PF02036 SCP-2 sterol transfer family VCA1004_RS08330 PF01136 Peptidase family U32 VCA1004_RS08335 PF01136 Peptidase family U32 VCA1004_RS08340 PF07719 Tetratricopeptide repeat VCA1004_RS08340 PF13181 Tetratricopeptide repeat VCA1004_RS08345 PF01138 3' exoribonuclease family, domain 1 VCA1004_RS08345 PF00575 S1 RNA binding domain VCA1004_RS08345 PF03725 3' exoribonuclease family, domain 2 VCA1004_RS08345 PF00013 KH domain VCA1004_RS08345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VCA1004_RS08350 PF00312 Ribosomal protein S15 VCA1004_RS08355 PF09157 Pseudouridine synthase II TruB, C-terminal VCA1004_RS08355 PF16198 tRNA pseudouridylate synthase B C-terminal domain VCA1004_RS08355 PF01509 TruB family pseudouridylate synthase (N terminal domain) VCA1004_RS08360 PF02033 Ribosome-binding factor A VCA1004_RS08365 PF08364 Bacterial translation initiation factor IF-2 associated region VCA1004_RS08365 PF11987 Translation-initiation factor 2 VCA1004_RS08365 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS08365 PF04760 Translation initiation factor IF-2, N-terminal region VCA1004_RS08370 PF00575 S1 RNA binding domain VCA1004_RS08370 PF08529 NusA N-terminal domain VCA1004_RS08370 PF13184 NusA-like KH domain VCA1004_RS08375 PF17384 RimP C-terminal SH3 domain VCA1004_RS08375 PF02576 RimP N-terminal domain VCA1004_RS08390 PF03840 Preprotein translocase SecG subunit VCA1004_RS08395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCA1004_RS08395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCA1004_RS08395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCA1004_RS08395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCA1004_RS08400 PF00809 Pterin binding enzyme VCA1004_RS08405 PF00004 ATPase family associated with various cellular activities (AAA) VCA1004_RS08405 PF01434 Peptidase family M41 VCA1004_RS08405 PF06480 FtsH Extracellular VCA1004_RS08405 PF17862 AAA+ lid domain VCA1004_RS08410 PF01728 FtsJ-like methyltransferase VCA1004_RS08415 PF01985 CRS1 / YhbY (CRM) domain VCA1004_RS08420 PF03449 Transcription elongation factor, N-terminal VCA1004_RS08420 PF01272 Transcription elongation factor, GreA/GreB, C-term VCA1004_RS08425 PF13609 Gram-negative porin VCA1004_RS08430 PF13609 Gram-negative porin VCA1004_RS08435 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VCA1004_RS08440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VCA1004_RS08440 PF02142 MGS-like domain VCA1004_RS08440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCA1004_RS08445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VCA1004_RS08445 PF00117 Glutamine amidotransferase class-I VCA1004_RS08450 PF01113 Dihydrodipicolinate reductase, N-terminus VCA1004_RS08450 PF05173 Dihydrodipicolinate reductase, C-terminus VCA1004_RS08455 PF01245 Ribosomal protein L19 VCA1004_RS08460 PF01746 tRNA (Guanine-1)-methyltransferase VCA1004_RS08465 PF01782 RimM N-terminal domain VCA1004_RS08465 PF05239 PRC-barrel domain VCA1004_RS08470 PF00886 Ribosomal protein S16 VCA1004_RS08475 PF02978 Signal peptide binding domain VCA1004_RS08475 PF00448 SRP54-type protein, GTPase domain VCA1004_RS08475 PF02881 SRP54-type protein, helical bundle domain VCA1004_RS08480 PF01578 Cytochrome C assembly protein VCA1004_RS08485 PF03471 Transporter associated domain VCA1004_RS08485 PF00571 CBS domain VCA1004_RS08485 PF01595 Cyclin M transmembrane N-terminal domain VCA1004_RS08490 PF02664 S-Ribosylhomocysteinase (LuxS) VCA1004_RS08495 PF04262 Glutamate-cysteine ligase VCA1004_RS08500 PF05193 Peptidase M16 inactive domain VCA1004_RS08500 PF00675 Insulinase (Peptidase family M16) VCA1004_RS08505 PF09335 SNARE associated Golgi protein VCA1004_RS08510 PF00107 Zinc-binding dehydrogenase VCA1004_RS08510 PF08240 Alcohol dehydrogenase GroES-like domain VCA1004_RS08555 PF02599 Global regulator protein family VCA1004_RS08560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCA1004_RS08560 PF02272 DHHA1 domain VCA1004_RS08560 PF01411 tRNA synthetases class II (A) VCA1004_RS08565 PF02631 RecX family VCA1004_RS08570 PF00154 recA bacterial DNA recombination protein VCA1004_RS08575 PF02464 Competence-damaged protein VCA1004_RS08580 PF16868 NMT1-like family VCA1004_RS08590 PF00488 MutS domain V VCA1004_RS08590 PF05192 MutS domain III VCA1004_RS08590 PF05188 MutS domain II VCA1004_RS08590 PF05190 MutS family domain IV VCA1004_RS08590 PF01624 MutS domain I VCA1004_RS08595 PF04539 Sigma-70 region 3 VCA1004_RS08595 PF00140 Sigma-70 factor, region 1.2 VCA1004_RS08595 PF04542 Sigma-70 region 2 VCA1004_RS08595 PF04545 Sigma-70, region 4 VCA1004_RS08600 PF01551 Peptidase family M23 VCA1004_RS08600 PF01476 LysM domain VCA1004_RS08610 PF01975 Survival protein SurE VCA1004_RS08615 PF01142 tRNA pseudouridine synthase D (TruD) VCA1004_RS08620 PF02542 YgbB family VCA1004_RS08625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VCA1004_RS08630 PF04977 Septum formation initiator VCA1004_RS08640 PF03952 Enolase, N-terminal domain VCA1004_RS08640 PF00113 Enolase, C-terminal TIM barrel domain VCA1004_RS08645 PF06418 CTP synthase N-terminus VCA1004_RS08645 PF00117 Glutamine amidotransferase class-I VCA1004_RS08650 PF03819 MazG nucleotide pyrophosphohydrolase domain VCA1004_RS08655 PF04607 Region found in RelA / SpoT proteins VCA1004_RS08655 PF02824 TGS domain VCA1004_RS08655 PF13291 ACT domain VCA1004_RS08660 PF01938 TRAM domain VCA1004_RS08660 PF05958 tRNA (Uracil-5-)-methyltransferase VCA1004_RS08665 PF00072 Response regulator receiver domain VCA1004_RS08665 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS08665 PF01627 Hpt domain VCA1004_RS08665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VCA1004_RS08665 PF00672 HAMP domain VCA1004_RS08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS08670 PF01648 4'-phosphopantetheinyl transferase superfamily VCA1004_RS08675 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VCA1004_RS08680 PF02565 Recombination protein O C terminal VCA1004_RS08680 PF11967 Recombination protein O N terminal VCA1004_RS08685 PF07650 KH domain VCA1004_RS08685 PF01926 50S ribosome-binding GTPase VCA1004_RS08690 PF14622 Ribonuclease-III-like VCA1004_RS08690 PF00035 Double-stranded RNA binding motif VCA1004_RS08695 PF10502 Signal peptidase, peptidase S26 VCA1004_RS08700 PF03144 Elongation factor Tu domain 2 VCA1004_RS08700 PF06421 GTP-binding protein LepA C-terminus VCA1004_RS08700 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS08700 PF00679 Elongation factor G C-terminus VCA1004_RS08710 PF17188 MucB/RseB C-terminal domain VCA1004_RS08710 PF03888 MucB/RseB N-terminal domain VCA1004_RS08715 PF03873 Anti sigma-E protein RseA, C-terminal domain VCA1004_RS08715 PF03872 Anti sigma-E protein RseA, N-terminal domain VCA1004_RS08720 PF04542 Sigma-70 region 2 VCA1004_RS08720 PF08281 Sigma-70, region 4 VCA1004_RS08725 PF02910 Fumarate reductase flavoprotein C-term VCA1004_RS08725 PF00890 FAD binding domain VCA1004_RS08730 PF03937 Flavinator of succinate dehydrogenase VCA1004_RS08745 PF01494 FAD binding domain VCA1004_RS08750 PF01494 FAD binding domain VCA1004_RS08755 PF03695 Uncharacterised protein family (UPF0149) VCA1004_RS08760 PF05164 Cell division protein ZapA VCA1004_RS08770 PF01812 5-formyltetrahydrofolate cyclo-ligase family VCA1004_RS08775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VCA1004_RS08780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VCA1004_RS08780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCA1004_RS08780 PF01842 ACT domain VCA1004_RS08790 PF13333 Integrase core domain VCA1004_RS08790 PF00665 Integrase core domain VCA1004_RS08790 PF13276 HTH-like domain VCA1004_RS08800 PF05552 Conserved TM helix VCA1004_RS08800 PF00924 Mechanosensitive ion channel VCA1004_RS08805 PF01116 Fructose-bisphosphate aldolase class-II VCA1004_RS08810 PF00162 Phosphoglycerate kinase VCA1004_RS08815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCA1004_RS08815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCA1004_RS08820 PF00854 POT family VCA1004_RS08825 PF02780 Transketolase, C-terminal domain VCA1004_RS08825 PF00456 Transketolase, thiamine diphosphate binding domain VCA1004_RS08825 PF02779 Transketolase, pyrimidine binding domain VCA1004_RS08830 PF02773 S-adenosylmethionine synthetase, C-terminal domain VCA1004_RS08830 PF02772 S-adenosylmethionine synthetase, central domain VCA1004_RS08830 PF00438 S-adenosylmethionine synthetase, N-terminal domain VCA1004_RS08840 PF10263 SprT-like family VCA1004_RS08840 PF17283 SprT-like zinc ribbon domain VCA1004_RS08845 PF04452 RNA methyltransferase VCA1004_RS08850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VCA1004_RS08850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VCA1004_RS08855 PF02622 Uncharacterized ACR, COG1678 VCA1004_RS08860 PF03652 Holliday junction resolvase VCA1004_RS08870 PF00437 Type II/IV secretion system protein VCA1004_RS08875 PF00437 Type II/IV secretion system protein VCA1004_RS08880 PF01168 Alanine racemase, N-terminal domain VCA1004_RS08885 PF14748 Pyrroline-5-carboxylate reductase dimerisation VCA1004_RS08885 PF03807 NADP oxidoreductase coenzyme F420-dependent VCA1004_RS08890 PF02325 YGGT family VCA1004_RS08895 PF02594 Uncharacterised ACR, YggU family COG1872 VCA1004_RS08905 PF01725 Ham1 family VCA1004_RS08910 PF06969 HemN C-terminal domain VCA1004_RS08910 PF04055 Radical SAM superfamily VCA1004_RS08915 PF04960 Glutaminase VCA1004_RS08920 PF02390 Putative methyltransferase VCA1004_RS08925 PF00730 HhH-GPD superfamily base excision DNA repair protein VCA1004_RS08925 PF14815 NUDIX domain VCA1004_RS08925 PF00633 Helix-hairpin-helix motif VCA1004_RS08930 PF04362 Bacterial Fe(2+) trafficking VCA1004_RS08935 PF01464 Transglycosylase SLT domain VCA1004_RS08935 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VCA1004_RS08985 PF13542 Helix-turn-helix domain of transposase family ISL3 VCA1004_RS08985 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VCA1004_RS08985 PF01610 Transposase VCA1004_RS08990 PF00171 Aldehyde dehydrogenase family VCA1004_RS09000 PF00535 Glycosyl transferase family 2 VCA1004_RS09015 PF03739 Lipopolysaccharide export system permease LptF/LptG VCA1004_RS09020 PF03739 Lipopolysaccharide export system permease LptF/LptG VCA1004_RS09025 PF00883 Cytosol aminopeptidase family, catalytic domain VCA1004_RS09025 PF02789 Cytosol aminopeptidase family, N-terminal domain VCA1004_RS09030 PF04364 DNA polymerase III chi subunit, HolC VCA1004_RS09035 PF10458 Valyl tRNA synthetase tRNA binding arm VCA1004_RS09035 PF00133 tRNA synthetases class I (I, L, M and V) VCA1004_RS09035 PF08264 Anticodon-binding domain of tRNA VCA1004_RS09055 PF00583 Acetyltransferase (GNAT) family VCA1004_RS09065 PF06877 Regulator of ribonuclease activity B VCA1004_RS09070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCA1004_RS09070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCA1004_RS09075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VCA1004_RS09075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VCA1004_RS09080 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VCA1004_RS09080 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VCA1004_RS09085 PF01042 Endoribonuclease L-PSP VCA1004_RS09095 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS09105 PF07690 Major Facilitator Superfamily VCA1004_RS09110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS09110 PF00529 HlyD membrane-fusion protein of T1SS VCA1004_RS09115 PF01047 MarR family VCA1004_RS09120 PF01544 CorA-like Mg2+ transporter protein VCA1004_RS09125 PF01553 Acyltransferase VCA1004_RS09130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VCA1004_RS09135 PF01722 BolA-like protein VCA1004_RS09145 PF05494 MlaC protein VCA1004_RS09150 PF02470 MlaD protein VCA1004_RS09155 PF02405 Permease MlaE VCA1004_RS09160 PF00005 ABC transporter VCA1004_RS09165 PF01699 Sodium/calcium exchanger protein VCA1004_RS09170 PF01380 SIS domain VCA1004_RS09170 PF00571 CBS domain VCA1004_RS09185 PF03968 OstA-like protein VCA1004_RS09190 PF00005 ABC transporter VCA1004_RS09190 PF12399 Branched-chain amino acid ATP-binding cassette transporter VCA1004_RS09195 PF04552 Sigma-54, DNA binding domain VCA1004_RS09195 PF04963 Sigma-54 factor, core binding domain VCA1004_RS09195 PF00309 Sigma-54 factor, Activator interacting domain (AID) VCA1004_RS09200 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VCA1004_RS09205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS09210 PF03668 P-loop ATPase protein family VCA1004_RS09215 PF00381 PTS HPr component phosphorylation site VCA1004_RS09220 PF00571 CBS domain VCA1004_RS09220 PF01769 Divalent cation transporter VCA1004_RS09220 PF03448 MgtE intracellular N domain VCA1004_RS09225 PF01523 Putative modulator of DNA gyrase VCA1004_RS09230 PF04751 Protein of unknown function (DUF615) VCA1004_RS09235 PF01523 Putative modulator of DNA gyrase VCA1004_RS09240 PF00795 Carbon-nitrogen hydrolase VCA1004_RS09250 PF00575 S1 RNA binding domain VCA1004_RS09250 PF10150 Ribonuclease E/G family VCA1004_RS09255 PF02545 Maf-like protein VCA1004_RS09260 PF04093 rod shape-determining protein MreD VCA1004_RS09265 PF04085 rod shape-determining protein MreC VCA1004_RS09305 PF07963 Prokaryotic N-terminal methylation motif VCA1004_RS09305 PF08334 Type II secretion system (T2SS), protein G VCA1004_RS09320 PF00482 Type II secretion system (T2SS), protein F VCA1004_RS09325 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCA1004_RS09325 PF00437 Type II/IV secretion system protein VCA1004_RS09335 PF01471 Putative peptidoglycan binding domain VCA1004_RS09335 PF13401 AAA domain VCA1004_RS09340 PF00263 Bacterial type II and III secretion system protein VCA1004_RS09340 PF03958 Bacterial type II/III secretion system short domain VCA1004_RS09360 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS09360 PF17157 Gammaproteobacterial periplasmic sensor domain VCA1004_RS09360 PF00563 EAL domain VCA1004_RS09365 PF00436 Single-strand binding protein family VCA1004_RS09370 PF00196 Bacterial regulatory proteins, luxR family VCA1004_RS09375 PF00483 Nucleotidyl transferase VCA1004_RS09380 PF00005 ABC transporter VCA1004_RS09380 PF17755 UvrA DNA-binding domain VCA1004_RS09380 PF17760 UvrA interaction domain VCA1004_RS09390 PF00266 Aminotransferase class-V VCA1004_RS09395 PF00696 Amino acid kinase family VCA1004_RS09395 PF01842 ACT domain VCA1004_RS09400 PF02574 Homocysteine S-methyltransferase VCA1004_RS09400 PF00809 Pterin binding enzyme VCA1004_RS09400 PF02965 Vitamin B12 dependent methionine synthase, activation domain VCA1004_RS09400 PF02607 B12 binding domain VCA1004_RS09400 PF02310 B12 binding domain VCA1004_RS09405 PF00999 Sodium/hydrogen exchanger family VCA1004_RS09410 PF00579 tRNA synthetases class I (W and Y) VCA1004_RS09410 PF01479 S4 domain VCA1004_RS09415 PF01476 LysM domain VCA1004_RS09415 PF08525 Opacity-associated protein A N-terminal motif VCA1004_RS09415 PF01551 Peptidase family M23 VCA1004_RS09420 PF01521 Iron-sulphur cluster biosynthesis VCA1004_RS09425 PF00202 Aminotransferase class-III VCA1004_RS09430 PF01594 AI-2E family transporter VCA1004_RS09435 PF05175 Methyltransferase small domain VCA1004_RS09435 PF08468 Methyltransferase small domain N-terminal VCA1004_RS09440 PF09308 LuxQ, periplasmic VCA1004_RS09440 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS09440 PF00072 Response regulator receiver domain VCA1004_RS09445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS09450 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS09455 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS09455 PF12911 N-terminal TM domain of oligopeptide transport permease C VCA1004_RS09460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS09460 PF00005 ABC transporter VCA1004_RS09465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VCA1004_RS09465 PF00005 ABC transporter VCA1004_RS09475 PF01869 BadF/BadG/BcrA/BcrD ATPase family VCA1004_RS09480 PF02838 Glycosyl hydrolase family 20, domain 2 VCA1004_RS09480 PF00728 Glycosyl hydrolase family 20, catalytic domain VCA1004_RS09485 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VCA1004_RS09485 PF06165 Glycosyltransferase family 36 VCA1004_RS09490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VCA1004_RS09490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VCA1004_RS09490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VCA1004_RS09490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VCA1004_RS09495 PF07690 Major Facilitator Superfamily VCA1004_RS09500 PF14814 Bifunctional transglycosylase second domain VCA1004_RS09500 PF00905 Penicillin binding protein transpeptidase domain VCA1004_RS09500 PF00912 Transglycosylase VCA1004_RS09505 PF00270 DEAD/DEAH box helicase VCA1004_RS09505 PF04408 Helicase associated domain (HA2) VCA1004_RS09505 PF08482 ATP-dependent helicase C-terminal VCA1004_RS09505 PF00271 Helicase conserved C-terminal domain VCA1004_RS09510 PF17746 SfsA N-terminal OB domain VCA1004_RS09510 PF03749 Sugar fermentation stimulation protein RE domain VCA1004_RS09515 PF01258 Prokaryotic dksA/traR C4-type zinc finger VCA1004_RS09520 PF00749 tRNA synthetases class I (E and Q), catalytic domain VCA1004_RS09525 PF01743 Poly A polymerase head domain VCA1004_RS09525 PF12626 Polymerase A arginine-rich C-terminus VCA1004_RS09525 PF12627 Probable RNA and SrmB- binding site of polymerase A VCA1004_RS09530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VCA1004_RS09535 PF02548 Ketopantoate hydroxymethyltransferase VCA1004_RS09540 PF02569 Pantoate-beta-alanine ligase VCA1004_RS09545 PF01061 ABC-2 type transporter VCA1004_RS09550 PF00005 ABC transporter VCA1004_RS09555 PF00484 Carbonic anhydrase VCA1004_RS09560 PF00156 Phosphoribosyl transferase domain VCA1004_RS09565 PF00440 Bacterial regulatory proteins, tetR family VCA1004_RS09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VCA1004_RS09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS09575 PF02817 e3 binding domain VCA1004_RS09575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VCA1004_RS09575 PF00364 Biotin-requiring enzyme VCA1004_RS09580 PF17831 Pyruvate dehydrogenase E1 component middle domain VCA1004_RS09580 PF00456 Transketolase, thiamine diphosphate binding domain VCA1004_RS09585 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS09585 PF07729 FCD domain VCA1004_RS09590 PF01510 N-acetylmuramoyl-L-alanine amidase VCA1004_RS09595 PF00155 Aminotransferase class I and II VCA1004_RS09600 PF03553 Na+/H+ antiporter family VCA1004_RS09605 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS09610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VCA1004_RS09610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VCA1004_RS09615 PF07963 Prokaryotic N-terminal methylation motif VCA1004_RS09615 PF00114 Pilin (bacterial filament) VCA1004_RS09620 PF00437 Type II/IV secretion system protein VCA1004_RS09620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VCA1004_RS09625 PF00482 Type II secretion system (T2SS), protein F VCA1004_RS09630 PF01478 Type IV leader peptidase family VCA1004_RS09630 PF06750 Bacterial Peptidase A24 N-terminal domain VCA1004_RS09635 PF01121 Dephospho-CoA kinase VCA1004_RS09640 PF07072 Cell division protein VCA1004_RS09645 PF03884 DNA gyrase inhibitor YacG VCA1004_RS09650 PF00293 NUDIX domain VCA1004_RS09655 PF07517 SecA DEAD-like domain VCA1004_RS09655 PF07516 SecA Wing and Scaffold domain VCA1004_RS09655 PF02810 SEC-C motif VCA1004_RS09655 PF01043 SecA preprotein cross-linking domain VCA1004_RS09665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VCA1004_RS09670 PF12327 FtsZ family, C-terminal domain VCA1004_RS09670 PF00091 Tubulin/FtsZ family, GTPase domain VCA1004_RS09675 PF02491 SHS2 domain inserted in FTSA VCA1004_RS09680 PF03799 Cell division protein FtsQ VCA1004_RS09680 PF08478 POTRA domain, FtsQ-type VCA1004_RS09685 PF08245 Mur ligase middle domain VCA1004_RS09685 PF02875 Mur ligase family, glutamate ligase domain VCA1004_RS09685 PF01225 Mur ligase family, catalytic domain VCA1004_RS09690 PF03033 Glycosyltransferase family 28 N-terminal domain VCA1004_RS09690 PF04101 Glycosyltransferase family 28 C-terminal domain VCA1004_RS09695 PF01098 Cell cycle protein VCA1004_RS09700 PF02875 Mur ligase family, glutamate ligase domain VCA1004_RS09700 PF08245 Mur ligase middle domain VCA1004_RS09705 PF00953 Glycosyl transferase family 4 VCA1004_RS09705 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VCA1004_RS09710 PF01225 Mur ligase family, catalytic domain VCA1004_RS09710 PF02875 Mur ligase family, glutamate ligase domain VCA1004_RS09710 PF08245 Mur ligase middle domain VCA1004_RS09715 PF01225 Mur ligase family, catalytic domain VCA1004_RS09715 PF08245 Mur ligase middle domain VCA1004_RS09715 PF02875 Mur ligase family, glutamate ligase domain VCA1004_RS09720 PF03717 Penicillin-binding Protein dimerisation domain VCA1004_RS09720 PF00905 Penicillin binding protein transpeptidase domain VCA1004_RS09725 PF04999 Cell division protein FtsL VCA1004_RS09730 PF01795 MraW methylase family VCA1004_RS09740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCA1004_RS09745 PF04348 LppC putative lipoprotein VCA1004_RS09750 PF02021 Uncharacterised protein family UPF0102 VCA1004_RS09755 PF13580 SIS domain VCA1004_RS09760 PF04972 BON domain VCA1004_RS09765 PF00005 ABC transporter VCA1004_RS09775 PF13416 Bacterial extracellular solute-binding protein VCA1004_RS09780 PF00909 Ammonium Transporter Family VCA1004_RS09785 PF00543 Nitrogen regulatory protein P-II VCA1004_RS09790 PF06062 Uncharacterised protein family (UPF0231) VCA1004_RS09820 PF01507 Phosphoadenosine phosphosulfate reductase family VCA1004_RS09825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VCA1004_RS09825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VCA1004_RS09830 PF00667 FAD binding domain VCA1004_RS09830 PF00175 Oxidoreductase NAD-binding domain VCA1004_RS09830 PF00258 Flavodoxin VCA1004_RS09845 PF01207 Dihydrouridine synthase (Dus) VCA1004_RS09850 PF01475 Ferric uptake regulator family VCA1004_RS09855 PF00342 Phosphoglucose isomerase VCA1004_RS09865 PF00842 Alanine racemase, C-terminal domain VCA1004_RS09865 PF01168 Alanine racemase, N-terminal domain VCA1004_RS09870 PF00772 DnaB-like helicase N terminal domain VCA1004_RS09870 PF03796 DnaB-like helicase C terminal domain VCA1004_RS09880 PF03948 Ribosomal protein L9, C-terminal domain VCA1004_RS09880 PF01281 Ribosomal protein L9, N-terminal domain VCA1004_RS09885 PF01084 Ribosomal protein S18 VCA1004_RS09890 PF00436 Single-strand binding protein family VCA1004_RS09895 PF01250 Ribosomal protein S6 VCA1004_RS09900 PF08032 RNA 2'-O ribose methyltransferase substrate binding VCA1004_RS09900 PF00588 SpoU rRNA Methylase family VCA1004_RS09905 PF00575 S1 RNA binding domain VCA1004_RS09905 PF08206 Ribonuclease B OB domain VCA1004_RS09905 PF00773 RNB domain VCA1004_RS09905 PF08461 Ribonuclease R winged-helix domain VCA1004_RS09905 PF17876 Cold shock domain VCA1004_RS09910 PF02082 Transcriptional regulator VCA1004_RS09915 PF00970 Oxidoreductase FAD-binding domain VCA1004_RS09915 PF00175 Oxidoreductase NAD-binding domain VCA1004_RS09915 PF00042 Globin VCA1004_RS09920 PF00709 Adenylosuccinate synthetase VCA1004_RS09925 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VCA1004_RS09930 PF01145 SPFH domain / Band 7 family VCA1004_RS09935 PF01145 SPFH domain / Band 7 family VCA1004_RS09935 PF12221 Bacterial membrane protein N terminal VCA1004_RS09940 PF01926 50S ribosome-binding GTPase VCA1004_RS09940 PF13167 GTP-binding GTPase N-terminal VCA1004_RS09940 PF16360 GTP-binding GTPase Middle Region VCA1004_RS09945 PF17209 Hfq protein VCA1004_RS09955 PF08676 MutL C terminal dimerisation domain VCA1004_RS09955 PF01119 DNA mismatch repair protein, C-terminal domain VCA1004_RS09960 PF01520 N-acetylmuramoyl-L-alanine amidase VCA1004_RS09965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VCA1004_RS09970 PF08331 Domain of unknown function (DUF1730) VCA1004_RS10010 PF00929 Exonuclease VCA1004_RS10015 PF03193 RsgA GTPase VCA1004_RS10020 PF02666 Phosphatidylserine decarboxylase VCA1004_RS10035 PF00152 tRNA synthetases class II (D, K and N) VCA1004_RS10040 PF00890 FAD binding domain VCA1004_RS10040 PF02910 Fumarate reductase flavoprotein C-term VCA1004_RS10045 PF13085 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS10045 PF13183 4Fe-4S dicluster domain VCA1004_RS10050 PF02300 Fumarate reductase subunit C VCA1004_RS10055 PF02313 Fumarate reductase subunit D VCA1004_RS10060 PF01132 Elongation factor P (EF-P) OB domain VCA1004_RS10060 PF08207 Elongation factor P (EF-P) KOW-like domain VCA1004_RS10060 PF09285 Elongation factor P, C-terminal VCA1004_RS10065 PF04055 Radical SAM superfamily VCA1004_RS10070 PF03466 LysR substrate binding domain VCA1004_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS10075 PF07274 Protein of unknown function (DUF1440) VCA1004_RS10080 PF00107 Zinc-binding dehydrogenase VCA1004_RS10080 PF08240 Alcohol dehydrogenase GroES-like domain VCA1004_RS10085 PF02308 MgtC family VCA1004_RS10090 PF00005 ABC transporter VCA1004_RS10095 PF00118 TCP-1/cpn60 chaperonin family VCA1004_RS10100 PF00166 Chaperonin 10 Kd subunit VCA1004_RS10105 PF01554 MatE VCA1004_RS10110 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS10110 PF06426 Serine acetyltransferase, N-terminal VCA1004_RS10115 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VCA1004_RS10115 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VCA1004_RS10120 PF02556 Preprotein translocase subunit SecB VCA1004_RS10125 PF00581 Rhodanese-like domain VCA1004_RS10130 PF01676 Metalloenzyme superfamily VCA1004_RS10130 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VCA1004_RS10135 PF01551 Peptidase family M23 VCA1004_RS10140 PF08448 PAS fold VCA1004_RS10140 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS10150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VCA1004_RS10150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VCA1004_RS10155 PF10531 SLBB domain VCA1004_RS10155 PF02563 Polysaccharide biosynthesis/export protein VCA1004_RS10155 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VCA1004_RS10160 PF01451 Low molecular weight phosphotyrosine protein phosphatase VCA1004_RS10165 PF13807 G-rich domain on putative tyrosine kinase VCA1004_RS10165 PF13614 AAA domain VCA1004_RS10165 PF02706 Chain length determinant protein VCA1004_RS10170 PF00465 Iron-containing alcohol dehydrogenase VCA1004_RS10170 PF00171 Aldehyde dehydrogenase family VCA1004_RS10185 PF00953 Glycosyl transferase family 4 VCA1004_RS10190 PF16363 GDP-mannose 4,6 dehydratase VCA1004_RS10200 PF01425 Amidase VCA1004_RS10215 PF00535 Glycosyl transferase family 2 VCA1004_RS10230 PF00535 Glycosyl transferase family 2 VCA1004_RS10255 PF10996 Beta-Casp domain VCA1004_RS10255 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VCA1004_RS10255 PF00753 Metallo-beta-lactamase superfamily VCA1004_RS10265 PF01370 NAD dependent epimerase/dehydratase family VCA1004_RS10280 PF03279 Bacterial lipid A biosynthesis acyltransferase VCA1004_RS10285 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS10290 PF13439 Glycosyltransferase Family 4 VCA1004_RS10290 PF00534 Glycosyl transferases group 1 VCA1004_RS10300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCA1004_RS10305 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VCA1004_RS10315 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS10320 PF00884 Sulfatase VCA1004_RS10320 PF11893 Domain of unknown function (DUF3413) VCA1004_RS10330 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VCA1004_RS10335 PF00535 Glycosyl transferase family 2 VCA1004_RS10340 PF01370 NAD dependent epimerase/dehydratase family VCA1004_RS10345 PF00534 Glycosyl transferases group 1 VCA1004_RS10345 PF13439 Glycosyltransferase Family 4 VCA1004_RS10350 PF01467 Cytidylyltransferase-like VCA1004_RS10355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VCA1004_RS10355 PF06827 Zinc finger found in FPG and IleRS VCA1004_RS10355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VCA1004_RS10360 PF00471 Ribosomal protein L33 VCA1004_RS10365 PF00830 Ribosomal L28 family VCA1004_RS10375 PF04002 RadC-like JAB domain VCA1004_RS10380 PF02441 Flavoprotein VCA1004_RS10380 PF04127 DNA / pantothenate metabolism flavoprotein VCA1004_RS10385 PF00692 dUTPase VCA1004_RS10390 PF00440 Bacterial regulatory proteins, tetR family VCA1004_RS10395 PF03279 Bacterial lipid A biosynthesis acyltransferase VCA1004_RS10400 PF00270 DEAD/DEAH box helicase VCA1004_RS10400 PF00271 Helicase conserved C-terminal domain VCA1004_RS10400 PF17191 RecG wedge domain VCA1004_RS10405 PF00860 Permease family VCA1004_RS10410 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS10410 PF00672 HAMP domain VCA1004_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS10415 PF00072 Response regulator receiver domain VCA1004_RS10415 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS10420 PF03449 Transcription elongation factor, N-terminal VCA1004_RS10420 PF01272 Transcription elongation factor, GreA/GreB, C-term VCA1004_RS10425 PF09371 Tex-like protein N-terminal domain VCA1004_RS10425 PF00575 S1 RNA binding domain VCA1004_RS10425 PF16921 Tex protein YqgF-like domain VCA1004_RS10425 PF17674 HHH domain VCA1004_RS10430 PF07690 Major Facilitator Superfamily VCA1004_RS10435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VCA1004_RS10435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VCA1004_RS10440 PF00230 Major intrinsic protein VCA1004_RS10445 PF01266 FAD dependent oxidoreductase VCA1004_RS10445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VCA1004_RS10450 PF08220 DeoR-like helix-turn-helix domain VCA1004_RS10450 PF00455 DeoR C terminal sensor domain VCA1004_RS10455 PF00561 alpha/beta hydrolase fold VCA1004_RS10465 PF01106 NifU-like domain VCA1004_RS10465 PF01521 Iron-sulphur cluster biosynthesis VCA1004_RS10470 PF00459 Inositol monophosphatase family VCA1004_RS10475 PF00293 NUDIX domain VCA1004_RS10480 PF01203 Type II secretion system (T2SS), protein N VCA1004_RS10485 PF04612 Type II secretion system (T2SS), protein M VCA1004_RS10490 PF05134 Type II secretion system (T2SS), protein L VCA1004_RS10490 PF12693 GspL periplasmic domain VCA1004_RS10495 PF03934 Type II secretion system (T2SS), protein K VCA1004_RS10500 PF11612 Type II secretion system (T2SS), protein J VCA1004_RS10500 PF07963 Prokaryotic N-terminal methylation motif VCA1004_RS10505 PF02501 Type II secretion system (T2SS), protein I VCA1004_RS10505 PF07963 Prokaryotic N-terminal methylation motif VCA1004_RS10510 PF12019 Type II transport protein GspH VCA1004_RS10520 PF08334 Type II secretion system (T2SS), protein G VCA1004_RS10520 PF07963 Prokaryotic N-terminal methylation motif VCA1004_RS10525 PF00482 Type II secretion system (T2SS), protein F VCA1004_RS10530 PF00437 Type II/IV secretion system protein VCA1004_RS10535 PF03958 Bacterial type II/III secretion system short domain VCA1004_RS10535 PF00263 Bacterial type II and III secretion system protein VCA1004_RS10540 PF11356 Type II secretion system protein C VCA1004_RS10545 PF01479 S4 domain VCA1004_RS10550 PF01430 Hsp33 protein VCA1004_RS10555 PF01293 Phosphoenolpyruvate carboxykinase VCA1004_RS10565 PF00583 Acetyltransferase (GNAT) family VCA1004_RS10565 PF09500 Putative thioesterase (yiiD_Cterm) VCA1004_RS10570 PF02580 D-Tyr-tRNA(Tyr) deacylase VCA1004_RS10575 PF03631 Virulence factor BrkB VCA1004_RS10580 PF00679 Elongation factor G C-terminus VCA1004_RS10580 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS10580 PF03144 Elongation factor Tu domain 2 VCA1004_RS10585 PF03951 Glutamine synthetase, beta-Grasp domain VCA1004_RS10585 PF00120 Glutamine synthetase, catalytic domain VCA1004_RS10595 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS10595 PF00989 PAS fold VCA1004_RS10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS10600 PF02954 Bacterial regulatory protein, Fis family VCA1004_RS10600 PF00158 Sigma-54 interaction domain VCA1004_RS10600 PF00072 Response regulator receiver domain VCA1004_RS10605 PF08447 PAS fold VCA1004_RS10605 PF08448 PAS fold VCA1004_RS10605 PF00563 EAL domain VCA1004_RS10605 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS10610 PF04055 Radical SAM superfamily VCA1004_RS10610 PF06969 HemN C-terminal domain VCA1004_RS10615 PF10675 Protein of unknown function (DUF2489) VCA1004_RS10620 PF04220 Der GTPase activator (YihI) VCA1004_RS10630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCA1004_RS10635 PF01926 50S ribosome-binding GTPase VCA1004_RS10640 PF00476 DNA polymerase family A VCA1004_RS10640 PF01367 5'-3' exonuclease, C-terminal SAM fold VCA1004_RS10640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VCA1004_RS10640 PF01612 3'-5' exonuclease VCA1004_RS10645 PF02592 Putative vitamin uptake transporter VCA1004_RS10655 PF00570 HRDC domain VCA1004_RS10655 PF09382 RQC domain VCA1004_RS10655 PF16124 RecQ zinc-binding VCA1004_RS10655 PF00270 DEAD/DEAH box helicase VCA1004_RS10655 PF00271 Helicase conserved C-terminal domain VCA1004_RS10660 PF00892 EamA-like transporter family VCA1004_RS10670 PF07813 LTXXQ motif family protein VCA1004_RS10675 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS10675 PF00072 Response regulator receiver domain VCA1004_RS10680 PF00672 HAMP domain VCA1004_RS10680 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS10680 PF16527 Two-component sensor protein CpxA, periplasmic domain VCA1004_RS10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS10685 PF00588 SpoU rRNA Methylase family VCA1004_RS10690 PF04186 FxsA cytoplasmic membrane protein VCA1004_RS10695 PF00206 Lyase VCA1004_RS10695 PF10415 Fumarase C C-terminus VCA1004_RS10700 PF03605 Anaerobic c4-dicarboxylate membrane transporter VCA1004_RS10705 PF02683 Cytochrome C biogenesis protein transmembrane region VCA1004_RS10705 PF11412 Disulphide bond corrector protein DsbC VCA1004_RS10710 PF00072 Response regulator receiver domain VCA1004_RS10710 PF00196 Bacterial regulatory proteins, luxR family VCA1004_RS10715 PF02080 TrkA-C domain VCA1004_RS10715 PF00999 Sodium/hydrogen exchanger family VCA1004_RS10715 PF03471 Transporter associated domain VCA1004_RS10720 PF01914 MarC family integral membrane protein VCA1004_RS10730 PF00474 Sodium:solute symporter family VCA1004_RS10740 PF00989 PAS fold VCA1004_RS10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS10740 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS10745 PF12832 MFS_1 like family VCA1004_RS10760 PF16177 Acetyl-coenzyme A synthetase N-terminus VCA1004_RS10760 PF00501 AMP-binding enzyme VCA1004_RS10760 PF13193 AMP-binding enzyme C-terminal domain VCA1004_RS10770 PF01220 Dehydroquinase class II VCA1004_RS10775 PF00364 Biotin-requiring enzyme VCA1004_RS10780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VCA1004_RS10780 PF00289 Biotin carboxylase, N-terminal domain VCA1004_RS10780 PF02785 Biotin carboxylase C-terminal domain VCA1004_RS10785 PF01970 Tripartite tricarboxylate transporter TctA family VCA1004_RS10795 PF03401 Tripartite tricarboxylate transporter family receptor VCA1004_RS10805 PF06196 Protein of unknown function (DUF997) VCA1004_RS10810 PF00474 Sodium:solute symporter family VCA1004_RS10820 PF01207 Dihydrouridine synthase (Dus) VCA1004_RS10825 PF02954 Bacterial regulatory protein, Fis family VCA1004_RS10830 PF02384 N-6 DNA Methylase VCA1004_RS10830 PF12161 HsdM N-terminal domain VCA1004_RS10835 PF01420 Type I restriction modification DNA specificity domain VCA1004_RS10845 PF18766 SWI2/SNF2 ATPase VCA1004_RS10845 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VCA1004_RS10845 PF12008 Type I restriction and modification enzyme - subunit R C terminal VCA1004_RS10855 PF00155 Aminotransferase class I and II VCA1004_RS10860 PF02378 Phosphotransferase system, EIIC VCA1004_RS10860 PF00367 phosphotransferase system, EIIB VCA1004_RS10865 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS10865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCA1004_RS10875 PF01808 AICARFT/IMPCHase bienzyme VCA1004_RS10875 PF02142 MGS-like domain VCA1004_RS10880 PF02844 Phosphoribosylglycinamide synthetase, N domain VCA1004_RS10880 PF02843 Phosphoribosylglycinamide synthetase, C domain VCA1004_RS10880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VCA1004_RS10890 PF00216 Bacterial DNA-binding protein VCA1004_RS10895 PF04222 Protein of unknown function (DUF416) VCA1004_RS10900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VCA1004_RS10905 PF03167 Uracil DNA glycosylase superfamily VCA1004_RS10920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS10930 PF01208 Uroporphyrinogen decarboxylase (URO-D) VCA1004_RS10935 PF00293 NUDIX domain VCA1004_RS10935 PF09297 NADH pyrophosphatase zinc ribbon domain VCA1004_RS10940 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VCA1004_RS10950 PF00665 Integrase core domain VCA1004_RS10950 PF13276 HTH-like domain VCA1004_RS10950 PF13333 Integrase core domain VCA1004_RS10960 PF04997 RNA polymerase Rpb1, domain 1 VCA1004_RS10960 PF00623 RNA polymerase Rpb1, domain 2 VCA1004_RS10960 PF04983 RNA polymerase Rpb1, domain 3 VCA1004_RS10960 PF05000 RNA polymerase Rpb1, domain 4 VCA1004_RS10960 PF04998 RNA polymerase Rpb1, domain 5 VCA1004_RS10965 PF04560 RNA polymerase Rpb2, domain 7 VCA1004_RS10965 PF00562 RNA polymerase Rpb2, domain 6 VCA1004_RS10965 PF04563 RNA polymerase beta subunit VCA1004_RS10965 PF04561 RNA polymerase Rpb2, domain 2 VCA1004_RS10965 PF04565 RNA polymerase Rpb2, domain 3 VCA1004_RS10965 PF10385 RNA polymerase beta subunit external 1 domain VCA1004_RS10970 PF00542 Ribosomal protein L7/L12 C-terminal domain VCA1004_RS10970 PF16320 Ribosomal protein L7/L12 dimerisation domain VCA1004_RS10975 PF00466 Ribosomal protein L10 VCA1004_RS10980 PF00687 Ribosomal protein L1p/L10e family VCA1004_RS10985 PF00298 Ribosomal protein L11, RNA binding domain VCA1004_RS10985 PF03946 Ribosomal protein L11, N-terminal domain VCA1004_RS10990 PF02357 Transcription termination factor nusG VCA1004_RS10990 PF00467 KOW motif VCA1004_RS10995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VCA1004_RS11000 PF00009 Elongation factor Tu GTP binding domain VCA1004_RS11000 PF03144 Elongation factor Tu domain 2 VCA1004_RS11000 PF03143 Elongation factor Tu C-terminal domain VCA1004_RS11025 PF00485 Phosphoribulokinase / Uridine kinase family VCA1004_RS11030 PF03099 Biotin/lipoate A/B protein ligase family VCA1004_RS11030 PF02237 Biotin protein ligase C terminal domain VCA1004_RS11030 PF08279 HTH domain VCA1004_RS11035 PF01565 FAD binding domain VCA1004_RS11035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VCA1004_RS11045 PF13091 PLD-like domain VCA1004_RS11080 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS11090 PF01488 Shikimate / quinate 5-dehydrogenase VCA1004_RS11090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VCA1004_RS11090 PF08501 Shikimate dehydrogenase substrate binding domain VCA1004_RS11095 PF01218 Coproporphyrinogen III oxidase VCA1004_RS11100 PF01300 Telomere recombination VCA1004_RS11105 PF00731 AIR carboxylase VCA1004_RS11110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VCA1004_RS11110 PF02222 ATP-grasp domain VCA1004_RS11115 PF01396 Topoisomerase DNA binding C4 zinc finger VCA1004_RS11120 PF04361 Protein of unknown function (DUF494) VCA1004_RS11125 PF17782 DprA winged helix domain VCA1004_RS11125 PF02481 DNA recombination-mediator protein A VCA1004_RS11135 PF01327 Polypeptide deformylase VCA1004_RS11140 PF00551 Formyl transferase VCA1004_RS11140 PF02911 Formyl transferase, C-terminal domain VCA1004_RS11145 PF01189 16S rRNA methyltransferase RsmB/F VCA1004_RS11145 PF01029 NusB family VCA1004_RS11150 PF02254 TrkA-N domain VCA1004_RS11150 PF02080 TrkA-C domain VCA1004_RS11155 PF02386 Cation transport protein VCA1004_RS11160 PF03006 Haemolysin-III related VCA1004_RS11170 PF06288 Protein of unknown function (DUF1040) VCA1004_RS11175 PF13746 4Fe-4S dicluster domain VCA1004_RS11175 PF12801 4Fe-4S binding domain VCA1004_RS11175 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VCA1004_RS11180 PF01636 Phosphotransferase enzyme family VCA1004_RS11185 PF01323 DSBA-like thioredoxin domain VCA1004_RS11190 PF01553 Acyltransferase VCA1004_RS11195 PF01078 Magnesium chelatase, subunit ChlI VCA1004_RS11195 PF13335 Magnesium chelatase, subunit ChlI C-terminal VCA1004_RS11200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCA1004_RS11200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCA1004_RS11200 PF00205 Thiamine pyrophosphate enzyme, central domain VCA1004_RS11210 PF01063 Amino-transferase class IV VCA1004_RS11215 PF00920 Dehydratase family VCA1004_RS11220 PF00585 C-terminal regulatory domain of Threonine dehydratase VCA1004_RS11220 PF00291 Pyridoxal-phosphate dependent enzyme VCA1004_RS11225 PF01380 SIS domain VCA1004_RS11230 PF03466 LysR substrate binding domain VCA1004_RS11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11235 PF07690 Major Facilitator Superfamily VCA1004_RS11240 PF12804 MobA-like NTP transferase domain VCA1004_RS11240 PF14602 Hexapeptide repeat of succinyl-transferase VCA1004_RS11240 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS11245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VCA1004_RS11245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VCA1004_RS11250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCA1004_RS11250 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCA1004_RS11255 PF00231 ATP synthase VCA1004_RS11260 PF00306 ATP synthase alpha/beta chain, C terminal domain VCA1004_RS11260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VCA1004_RS11260 PF02874 ATP synthase alpha/beta family, beta-barrel domain VCA1004_RS11265 PF00213 ATP synthase delta (OSCP) subunit VCA1004_RS11270 PF00430 ATP synthase B/B' CF(0) VCA1004_RS11275 PF00137 ATP synthase subunit C VCA1004_RS11280 PF00119 ATP synthase A chain VCA1004_RS11290 PF02195 ParB-like nuclease domain VCA1004_RS11290 PF17762 HTH domain found in ParB protein VCA1004_RS11295 PF13614 AAA domain VCA1004_RS11300 PF02527 rRNA small subunit methyltransferase G VCA1004_RS11305 PF01134 Glucose inhibited division protein A VCA1004_RS11305 PF13932 GidA associated domain VCA1004_RS11335 PF01709 Transcriptional regulator VCA1004_RS11345 PF01554 MatE VCA1004_RS11350 PF12833 Helix-turn-helix domain VCA1004_RS11355 PF02554 Carbon starvation protein CstA VCA1004_RS11355 PF13722 5TM C-terminal transporter carbon starvation CstA VCA1004_RS11365 PF02374 Anion-transporting ATPase VCA1004_RS11370 PF00378 Enoyl-CoA hydratase/isomerase VCA1004_RS11375 PF07690 Major Facilitator Superfamily VCA1004_RS11380 PF03616 Sodium/glutamate symporter VCA1004_RS11390 PF02698 DUF218 domain VCA1004_RS11395 PF13378 Enolase C-terminal domain-like VCA1004_RS11395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VCA1004_RS11400 PF00246 Zinc carboxypeptidase VCA1004_RS11405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS11415 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS11420 PF00474 Sodium:solute symporter family VCA1004_RS11425 PF03466 LysR substrate binding domain VCA1004_RS11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11450 PF00593 TonB dependent receptor VCA1004_RS11450 PF07715 TonB-dependent Receptor Plug Domain VCA1004_RS11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11455 PF03466 LysR substrate binding domain VCA1004_RS11460 PF00005 ABC transporter VCA1004_RS11465 PF01032 FecCD transport family VCA1004_RS11470 PF01032 FecCD transport family VCA1004_RS11480 PF01047 MarR family VCA1004_RS11485 PF02566 OsmC-like protein VCA1004_RS11490 PF08787 Alginate lyase VCA1004_RS11500 PF06953 Arsenical resistance operon trans-acting repressor ArsD VCA1004_RS11505 PF02374 Anion-transporting ATPase VCA1004_RS11510 PF03180 NLPA lipoprotein VCA1004_RS11515 PF00005 ABC transporter VCA1004_RS11515 PF12848 ABC transporter VCA1004_RS11520 PF07690 Major Facilitator Superfamily VCA1004_RS11525 PF00873 AcrB/AcrD/AcrF family VCA1004_RS11530 PF00529 HlyD membrane-fusion protein of T1SS VCA1004_RS11530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11545 PF03466 LysR substrate binding domain VCA1004_RS11550 PF07690 Major Facilitator Superfamily VCA1004_RS11560 PF07690 Major Facilitator Superfamily VCA1004_RS11575 PF00132 Bacterial transferase hexapeptide (six repeats) VCA1004_RS11575 PF12464 Maltose acetyltransferase VCA1004_RS11580 PF00849 RNA pseudouridylate synthase VCA1004_RS11590 PF01867 CRISPR associated protein Cas1 VCA1004_RS11600 PF09611 CRISPR-associated protein (Cas_Csy1) VCA1004_RS11605 PF09614 CRISPR-associated protein (Cas_Csy2) VCA1004_RS11610 PF09615 CRISPR-associated protein (Cas_Csy3) VCA1004_RS11620 PF02347 Glycine cleavage system P-protein VCA1004_RS11625 PF01597 Glycine cleavage H-protein VCA1004_RS11635 PF01235 Sodium:alanine symporter family VCA1004_RS11640 PF08669 Glycine cleavage T-protein C-terminal barrel domain VCA1004_RS11640 PF01571 Aminomethyltransferase folate-binding domain VCA1004_RS11655 PF08274 PhnA Zinc-Ribbon VCA1004_RS11655 PF03831 PhnA domain VCA1004_RS11665 PF00367 phosphotransferase system, EIIB VCA1004_RS11665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VCA1004_RS11665 PF02378 Phosphotransferase system, EIIC VCA1004_RS11670 PF00232 Glycosyl hydrolase family 1 VCA1004_RS11675 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS11680 PF13419 Haloacid dehalogenase-like hydrolase VCA1004_RS11685 PF01047 MarR family VCA1004_RS11690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VCA1004_RS11695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VCA1004_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS11705 PF00005 ABC transporter VCA1004_RS11705 PF00571 CBS domain VCA1004_RS11710 PF00704 Glycosyl hydrolases family 18 VCA1004_RS11710 PF06483 Chitinase C VCA1004_RS11715 PF02028 BCCT, betaine/carnitine/choline family transporter VCA1004_RS11720 PF01979 Amidohydrolase family VCA1004_RS11725 PF03473 MOSC domain VCA1004_RS11725 PF03476 MOSC N-terminal beta barrel domain VCA1004_RS11725 PF00111 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS11755 PF00596 Class II Aldolase and Adducin N-terminal domain VCA1004_RS11760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VCA1004_RS11760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VCA1004_RS11765 PF07882 L-fucose isomerase, second N-terminal domain VCA1004_RS11765 PF02952 L-fucose isomerase, C-terminal domain VCA1004_RS11765 PF07881 L-fucose isomerase, first N-terminal domain VCA1004_RS11770 PF00455 DeoR C terminal sensor domain VCA1004_RS11770 PF08220 DeoR-like helix-turn-helix domain VCA1004_RS11785 PF00141 Peroxidase VCA1004_RS11790 PF00270 DEAD/DEAH box helicase VCA1004_RS11790 PF00271 Helicase conserved C-terminal domain VCA1004_RS11795 PF00583 Acetyltransferase (GNAT) family VCA1004_RS11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11800 PF03466 LysR substrate binding domain VCA1004_RS11805 PF00881 Nitroreductase family VCA1004_RS11815 PF03466 LysR substrate binding domain VCA1004_RS11815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VCA1004_RS11825 PF07681 DoxX VCA1004_RS11830 PF00155 Aminotransferase class I and II VCA1004_RS11835 PF13333 Integrase core domain VCA1004_RS11835 PF13276 HTH-like domain VCA1004_RS11835 PF00665 Integrase core domain VCA1004_RS11850 PF08402 TOBE domain VCA1004_RS11850 PF00005 ABC transporter VCA1004_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS11875 PF07702 UTRA domain VCA1004_RS11875 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS11880 PF03466 LysR substrate binding domain VCA1004_RS11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11885 PF01925 Sulfite exporter TauE/SafE VCA1004_RS11890 PF12792 CSS motif domain associated with EAL VCA1004_RS11890 PF00563 EAL domain VCA1004_RS11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS11905 PF03466 LysR substrate binding domain VCA1004_RS11910 PF00155 Aminotransferase class I and II VCA1004_RS11915 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS11920 PF05068 Mannitol repressor VCA1004_RS11925 PF08125 Mannitol dehydrogenase C-terminal domain VCA1004_RS11925 PF01232 Mannitol dehydrogenase Rossmann domain VCA1004_RS11930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS11930 PF02378 Phosphotransferase system, EIIC VCA1004_RS11930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCA1004_RS11935 PF05726 Pirin C-terminal cupin domain VCA1004_RS11935 PF02678 Pirin VCA1004_RS11945 PF00005 ABC transporter VCA1004_RS11950 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS11965 PF00881 Nitroreductase family VCA1004_RS11970 PF13654 AAA domain VCA1004_RS11970 PF05362 Lon protease (S16) C-terminal proteolytic domain VCA1004_RS11980 PF00037 4Fe-4S binding domain VCA1004_RS11980 PF12838 4Fe-4S dicluster domain VCA1004_RS11985 PF02613 Nitrate reductase delta subunit VCA1004_RS11990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCA1004_RS11990 PF01568 Molydopterin dinucleotide binding domain VCA1004_RS11990 PF00384 Molybdopterin oxidoreductase VCA1004_RS11995 PF13247 4Fe-4S dicluster domain VCA1004_RS11995 PF12800 4Fe-4S binding domain VCA1004_RS12000 PF04976 DMSO reductase anchor subunit (DmsC) VCA1004_RS12005 PF01734 Patatin-like phospholipase VCA1004_RS12015 PF03553 Na+/H+ antiporter family VCA1004_RS12020 PF05661 Protein of unknown function (DUF808) VCA1004_RS12040 PF07152 YaeQ protein VCA1004_RS12045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VCA1004_RS12045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VCA1004_RS12060 PF10063 Uncharacterized integral membrane protein (DUF2301) VCA1004_RS12075 PF00149 Calcineurin-like phosphoesterase VCA1004_RS12075 PF02872 5'-nucleotidase, C-terminal domain VCA1004_RS12080 PF16363 GDP-mannose 4,6 dehydratase VCA1004_RS12085 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VCA1004_RS12085 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VCA1004_RS12090 PF10509 Galactokinase galactose-binding signature VCA1004_RS12090 PF00288 GHMP kinases N terminal domain VCA1004_RS12090 PF08544 GHMP kinases C terminal VCA1004_RS12095 PF01263 Aldose 1-epimerase VCA1004_RS12100 PF07690 Major Facilitator Superfamily VCA1004_RS12105 PF01569 PAP2 superfamily VCA1004_RS12120 PF07584 Aerotolerance regulator N-terminal VCA1004_RS12120 PF00092 von Willebrand factor type A domain VCA1004_RS12135 PF01882 Protein of unknown function DUF58 VCA1004_RS12140 PF17863 AAA lid domain VCA1004_RS12140 PF07726 ATPase family associated with various cellular activities (AAA) VCA1004_RS12150 PF12843 Putative quorum-sensing-regulated virulence factor VCA1004_RS12155 PF01259 SAICAR synthetase VCA1004_RS12165 PF00230 Major intrinsic protein VCA1004_RS12180 PF02913 FAD linked oxidases, C-terminal domain VCA1004_RS12180 PF13183 4Fe-4S dicluster domain VCA1004_RS12180 PF01565 FAD binding domain VCA1004_RS12185 PF13609 Gram-negative porin VCA1004_RS12200 PF03129 Anticodon binding domain VCA1004_RS12200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VCA1004_RS12200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VCA1004_RS12200 PF02824 TGS domain VCA1004_RS12205 PF00707 Translation initiation factor IF-3, C-terminal domain VCA1004_RS12205 PF05198 Translation initiation factor IF-3, N-terminal domain VCA1004_RS12210 PF01632 Ribosomal protein L35 VCA1004_RS12215 PF00453 Ribosomal protein L20 VCA1004_RS12220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS12225 PF12704 MacB-like periplasmic core domain VCA1004_RS12225 PF00005 ABC transporter VCA1004_RS12225 PF02687 FtsX-like permease family VCA1004_RS12230 PF02321 Outer membrane efflux protein VCA1004_RS12245 PF00691 OmpA family VCA1004_RS12250 PF01011 PQQ enzyme repeat VCA1004_RS12260 PF13533 Biotin-lipoyl like VCA1004_RS12270 PF04958 Arginine N-succinyltransferase beta subunit VCA1004_RS12275 PF00171 Aldehyde dehydrogenase family VCA1004_RS12280 PF04996 Succinylarginine dihydrolase VCA1004_RS12285 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VCA1004_RS12305 PF00478 IMP dehydrogenase / GMP reductase domain VCA1004_RS12310 PF01022 Bacterial regulatory protein, arsR family VCA1004_RS12315 PF01758 Sodium Bile acid symporter family VCA1004_RS12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS12320 PF03466 LysR substrate binding domain VCA1004_RS12325 PF03788 LrgA family VCA1004_RS12330 PF04172 LrgB-like family VCA1004_RS12340 PF01926 50S ribosome-binding GTPase VCA1004_RS12355 PF02311 AraC-like ligand binding domain VCA1004_RS12355 PF12833 Helix-turn-helix domain VCA1004_RS12360 PF01979 Amidohydrolase family VCA1004_RS12365 PF07690 Major Facilitator Superfamily VCA1004_RS12375 PF00072 Response regulator receiver domain VCA1004_RS12375 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS12380 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS12380 PF00672 HAMP domain VCA1004_RS12390 PF07670 Nucleoside recognition VCA1004_RS12395 PF00270 DEAD/DEAH box helicase VCA1004_RS12395 PF00271 Helicase conserved C-terminal domain VCA1004_RS12410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VCA1004_RS12430 PF08267 Cobalamin-independent synthase, N-terminal domain VCA1004_RS12430 PF01717 Cobalamin-independent synthase, Catalytic domain VCA1004_RS12440 PF00128 Alpha amylase, catalytic domain VCA1004_RS12445 PF02264 LamB porin VCA1004_RS12455 PF14537 Cytochrome c3 VCA1004_RS12455 PF00890 FAD binding domain VCA1004_RS12465 PF00175 Oxidoreductase NAD-binding domain VCA1004_RS12465 PF00111 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS12465 PF00970 Oxidoreductase FAD-binding domain VCA1004_RS12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS12470 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS12470 PF00672 HAMP domain VCA1004_RS12475 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS12475 PF00072 Response regulator receiver domain VCA1004_RS12485 PF08402 TOBE domain VCA1004_RS12485 PF00005 ABC transporter VCA1004_RS12490 PF01547 Bacterial extracellular solute-binding protein VCA1004_RS12495 PF14785 Maltose transport system permease protein MalF P2 domain VCA1004_RS12495 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS12500 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS12505 PF01555 DNA methylase VCA1004_RS12505 PF18755 Restriction Enzyme Adenine Methylase Associated VCA1004_RS12525 PF00248 Aldo/keto reductase family VCA1004_RS12530 PF00107 Zinc-binding dehydrogenase VCA1004_RS12530 PF08240 Alcohol dehydrogenase GroES-like domain VCA1004_RS12535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VCA1004_RS12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS12540 PF03466 LysR substrate binding domain VCA1004_RS12545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VCA1004_RS12545 PF03625 Domain of unknown function DUF302 VCA1004_RS12560 PF00196 Bacterial regulatory proteins, luxR family VCA1004_RS12560 PF17874 MalT-like TPR region VCA1004_RS12565 PF02446 4-alpha-glucanotransferase VCA1004_RS12570 PF00474 Sodium:solute symporter family VCA1004_RS12575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VCA1004_RS12575 PF00391 PEP-utilising enzyme, mobile domain VCA1004_RS12575 PF02896 PEP-utilising enzyme, TIM barrel domain VCA1004_RS12580 PF03618 Kinase/pyrophosphorylase VCA1004_RS12595 PF03466 LysR substrate binding domain VCA1004_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS12600 PF02254 TrkA-N domain VCA1004_RS12600 PF02080 TrkA-C domain VCA1004_RS12605 PF02386 Cation transport protein VCA1004_RS12610 PF03733 Inner membrane component domain VCA1004_RS12615 PF02566 OsmC-like protein VCA1004_RS12620 PF01679 Proteolipid membrane potential modulator VCA1004_RS12625 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS12625 PF07702 UTRA domain VCA1004_RS12660 PF03466 LysR substrate binding domain VCA1004_RS12660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS12665 PF00155 Aminotransferase class I and II VCA1004_RS12670 PF08240 Alcohol dehydrogenase GroES-like domain VCA1004_RS12670 PF00107 Zinc-binding dehydrogenase VCA1004_RS12680 PF00581 Rhodanese-like domain VCA1004_RS12680 PF17773 UPF0176 acylphosphatase like domain VCA1004_RS12685 PF00962 Adenosine/AMP deaminase VCA1004_RS12700 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS12700 PF07729 FCD domain VCA1004_RS12710 PF01274 Malate synthase VCA1004_RS12715 PF00205 Thiamine pyrophosphate enzyme, central domain VCA1004_RS12715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VCA1004_RS12715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VCA1004_RS12720 PF01261 Xylose isomerase-like TIM barrel VCA1004_RS12725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VCA1004_RS12725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCA1004_RS12730 PF00440 Bacterial regulatory proteins, tetR family VCA1004_RS12740 PF00781 Diacylglycerol kinase catalytic domain VCA1004_RS12745 PF03222 Tryptophan/tyrosine permease family VCA1004_RS12750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VCA1004_RS12750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VCA1004_RS12750 PF01799 [2Fe-2S] binding domain VCA1004_RS12750 PF00111 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS12755 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VCA1004_RS12755 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VCA1004_RS12765 PF01979 Amidohydrolase family VCA1004_RS12775 PF02253 Phospholipase A1 VCA1004_RS12790 PF00478 IMP dehydrogenase / GMP reductase domain VCA1004_RS12790 PF00571 CBS domain VCA1004_RS12805 PF00171 Aldehyde dehydrogenase family VCA1004_RS12815 PF02682 Carboxyltransferase domain, subdomain C and D VCA1004_RS12820 PF02626 Carboxyltransferase domain, subdomain A and B VCA1004_RS12825 PF12805 FUSC-like inner membrane protein yccS VCA1004_RS12830 PF12462 DNA helicase IV / RNA helicase N terminal VCA1004_RS12830 PF13361 UvrD-like helicase C-terminal domain VCA1004_RS12830 PF00580 UvrD/REP helicase N-terminal domain VCA1004_RS12840 PF00158 Sigma-54 interaction domain VCA1004_RS12840 PF01590 GAF domain VCA1004_RS12850 PF07549 SecD/SecF GG Motif VCA1004_RS12850 PF13721 SecD export protein N-terminal TM region VCA1004_RS12850 PF02355 Protein export membrane protein VCA1004_RS12855 PF02355 Protein export membrane protein VCA1004_RS12855 PF07549 SecD/SecF GG Motif VCA1004_RS12860 PF03063 Prismane/CO dehydrogenase family VCA1004_RS12865 PF00970 Oxidoreductase FAD-binding domain VCA1004_RS12865 PF00175 Oxidoreductase NAD-binding domain VCA1004_RS12865 PF00111 2Fe-2S iron-sulfur cluster binding domain VCA1004_RS12870 PF00884 Sulfatase VCA1004_RS12875 PF17863 AAA lid domain VCA1004_RS12875 PF07726 ATPase family associated with various cellular activities (AAA) VCA1004_RS12895 PF13519 von Willebrand factor type A domain VCA1004_RS12895 PF07584 Aerotolerance regulator N-terminal VCA1004_RS12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS12905 PF03466 LysR substrate binding domain VCA1004_RS12915 PF00266 Aminotransferase class-V VCA1004_RS12925 PF13188 PAS domain VCA1004_RS12925 PF03707 Bacterial signalling protein N terminal repeat VCA1004_RS12925 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS12925 PF00563 EAL domain VCA1004_RS12930 PF00923 Transaldolase/Fructose-6-phosphate aldolase VCA1004_RS12935 PF00704 Glycosyl hydrolases family 18 VCA1004_RS12935 PF08329 Chitinase A, N-terminal domain VCA1004_RS12940 PF13302 Acetyltransferase (GNAT) domain VCA1004_RS12945 PF00583 Acetyltransferase (GNAT) family VCA1004_RS12950 PF00561 alpha/beta hydrolase fold VCA1004_RS12955 PF03099 Biotin/lipoate A/B protein ligase family VCA1004_RS12955 PF10437 Bacterial lipoate protein ligase C-terminus VCA1004_RS12960 PF00313 'Cold-shock' DNA-binding domain VCA1004_RS12965 PF00793 DAHP synthetase I family VCA1004_RS12970 PF05971 RNA methyltransferase VCA1004_RS12975 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS12980 PF00294 pfkB family carbohydrate kinase VCA1004_RS12985 PF13407 Periplasmic binding protein domain VCA1004_RS12990 PF02653 Branched-chain amino acid transport system / permease component VCA1004_RS12995 PF00005 ABC transporter VCA1004_RS13000 PF05025 RbsD / FucU transport protein family VCA1004_RS13015 PF01863 Protein of unknown function DUF45 VCA1004_RS13025 PF07055 Enoyl reductase FAD binding domain VCA1004_RS13025 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VCA1004_RS13025 PF12241 Trans-2-enoyl-CoA reductase catalytic region VCA1004_RS13030 PF13472 GDSL-like Lipase/Acylhydrolase family VCA1004_RS13035 PF00005 ABC transporter VCA1004_RS13045 PF01134 Glucose inhibited division protein A VCA1004_RS13055 PF13597 Anaerobic ribonucleoside-triphosphate reductase VCA1004_RS13055 PF03477 ATP cone domain VCA1004_RS13065 PF00155 Aminotransferase class I and II VCA1004_RS13070 PF08443 RimK-like ATP-grasp domain VCA1004_RS13070 PF18030 RimK PreATP-grasp domain VCA1004_RS13075 PF07685 CobB/CobQ-like glutamine amidotransferase domain VCA1004_RS13075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VCA1004_RS13080 PF03459 TOBE domain VCA1004_RS13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS13090 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS13095 PF03459 TOBE domain VCA1004_RS13095 PF00005 ABC transporter VCA1004_RS13110 PF00128 Alpha amylase, catalytic domain VCA1004_RS13115 PF08803 Putative mono-oxygenase ydhR VCA1004_RS13120 PF14525 AraC-binding-like domain VCA1004_RS13120 PF12833 Helix-turn-helix domain VCA1004_RS13125 PF07715 TonB-dependent Receptor Plug Domain VCA1004_RS13125 PF00593 TonB dependent receptor VCA1004_RS13135 PF00994 Probable molybdopterin binding domain VCA1004_RS13145 PF13417 Glutathione S-transferase, N-terminal domain VCA1004_RS13155 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VCA1004_RS13170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VCA1004_RS13170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VCA1004_RS13170 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VCA1004_RS13175 PF02233 NAD(P) transhydrogenase beta subunit VCA1004_RS13185 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS13185 PF00072 Response regulator receiver domain VCA1004_RS13195 PF03701 Uncharacterised protein family (UPF0181) VCA1004_RS13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS13200 PF03466 LysR substrate binding domain VCA1004_RS13205 PF04219 Protein of unknown function, DUF VCA1004_RS13250 PF00115 Cytochrome C and Quinol oxidase polypeptide I VCA1004_RS13265 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VCA1004_RS13265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VCA1004_RS13275 PF00403 Heavy-metal-associated domain VCA1004_RS13290 PF00027 Cyclic nucleotide-binding domain VCA1004_RS13290 PF13545 Crp-like helix-turn-helix domain VCA1004_RS13295 PF00582 Universal stress protein family VCA1004_RS13300 PF01171 PP-loop family VCA1004_RS13320 PF08402 TOBE domain VCA1004_RS13320 PF00005 ABC transporter VCA1004_RS13325 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS13335 PF13416 Bacterial extracellular solute-binding protein VCA1004_RS13340 PF02146 Sir2 family VCA1004_RS13360 PF00480 ROK family VCA1004_RS13365 PF00877 NlpC/P60 family VCA1004_RS13370 PF03881 Fructosamine kinase VCA1004_RS13380 PF01554 MatE VCA1004_RS13385 PF14743 DNA ligase OB-like domain VCA1004_RS13385 PF01068 ATP dependent DNA ligase domain VCA1004_RS13390 PF13419 Haloacid dehalogenase-like hydrolase VCA1004_RS13395 PF12804 MobA-like NTP transferase domain VCA1004_RS13400 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VCA1004_RS13430 PF00583 Acetyltransferase (GNAT) family VCA1004_RS13440 PF00375 Sodium:dicarboxylate symporter family VCA1004_RS13450 PF02581 Thiamine monophosphate synthase VCA1004_RS13455 PF02110 Hydroxyethylthiazole kinase family VCA1004_RS13460 PF08543 Phosphomethylpyrimidine kinase VCA1004_RS13470 PF01544 CorA-like Mg2+ transporter protein VCA1004_RS13480 PF00043 Glutathione S-transferase, C-terminal domain VCA1004_RS13480 PF02798 Glutathione S-transferase, N-terminal domain VCA1004_RS13490 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) VCA1004_RS13505 PF03880 DbpA RNA binding domain VCA1004_RS13505 PF00271 Helicase conserved C-terminal domain VCA1004_RS13505 PF00270 DEAD/DEAH box helicase VCA1004_RS13515 PF00893 Small Multidrug Resistance protein VCA1004_RS13520 PF01266 FAD dependent oxidoreductase VCA1004_RS13525 PF01168 Alanine racemase, N-terminal domain VCA1004_RS13525 PF00842 Alanine racemase, C-terminal domain VCA1004_RS13530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS13530 PF03466 LysR substrate binding domain VCA1004_RS13545 PF00005 ABC transporter VCA1004_RS13550 PF01032 FecCD transport family VCA1004_RS13555 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VCA1004_RS13560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCA1004_RS13560 PF10414 Sirohaem synthase dimerisation region VCA1004_RS13560 PF14824 Sirohaem biosynthesis protein central VCA1004_RS13565 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS13570 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS13575 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS13580 PF00005 ABC transporter VCA1004_RS13585 PF01027 Inhibitor of apoptosis-promoting Bax1 VCA1004_RS13590 PF04358 DsrC like protein VCA1004_RS13595 PF00708 Acylphosphatase VCA1004_RS13600 PF10672 S-adenosylmethionine-dependent methyltransferase VCA1004_RS13600 PF17785 PUA-like domain VCA1004_RS13610 PF06508 Queuosine biosynthesis protein QueC VCA1004_RS13615 PF00293 NUDIX domain VCA1004_RS13625 PF01810 LysE type translocator VCA1004_RS13630 PF00375 Sodium:dicarboxylate symporter family VCA1004_RS13645 PF00012 Hsp70 protein VCA1004_RS13650 PF00012 Hsp70 protein VCA1004_RS13665 PF01557 Fumarylacetoacetate (FAA) hydrolase family VCA1004_RS13670 PF13476 AAA domain VCA1004_RS13675 PF00149 Calcineurin-like phosphoesterase VCA1004_RS13675 PF12320 Type 5 capsule protein repressor C-terminal domain VCA1004_RS13680 PF03783 Curli production assembly/transport component CsgG VCA1004_RS13685 PF10614 Type VIII secretion system (T8SS), CsgF protein VCA1004_RS13695 PF00196 Bacterial regulatory proteins, luxR family VCA1004_RS13725 PF02142 MGS-like domain VCA1004_RS13735 PF00884 Sulfatase VCA1004_RS13740 PF13186 Iron-sulfur cluster-binding domain VCA1004_RS13740 PF04055 Radical SAM superfamily VCA1004_RS13755 PF11756 Nitrous oxide-stimulated promoter VCA1004_RS13760 PF02492 CobW/HypB/UreG, nucleotide-binding domain VCA1004_RS13760 PF07683 Cobalamin synthesis protein cobW C-terminal domain VCA1004_RS13765 PF00654 Voltage gated chloride channel VCA1004_RS13770 PF00909 Ammonium Transporter Family VCA1004_RS13775 PF00691 OmpA family VCA1004_RS13775 PF01389 OmpA-like transmembrane domain VCA1004_RS13780 PF00206 Lyase VCA1004_RS13780 PF10415 Fumarase C C-terminus VCA1004_RS13790 PF00581 Rhodanese-like domain VCA1004_RS13810 PF07690 Major Facilitator Superfamily VCA1004_RS13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS13815 PF03466 LysR substrate binding domain VCA1004_RS13820 PF00248 Aldo/keto reductase family VCA1004_RS13845 PF00474 Sodium:solute symporter family VCA1004_RS13855 PF06178 Oligogalacturonate-specific porin protein (KdgM) VCA1004_RS13860 PF08787 Alginate lyase VCA1004_RS13865 PF08787 Alginate lyase VCA1004_RS13875 PF00571 CBS domain VCA1004_RS13880 PF07729 FCD domain VCA1004_RS13880 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS13885 PF07729 FCD domain VCA1004_RS13885 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS13895 PF05426 Alginate lyase VCA1004_RS13895 PF07940 Heparinase II/III-like protein VCA1004_RS13900 PF05426 Alginate lyase VCA1004_RS13900 PF07940 Heparinase II/III-like protein VCA1004_RS13905 PF07883 Cupin domain VCA1004_RS13910 PF00294 pfkB family carbohydrate kinase VCA1004_RS13915 PF01081 KDPG and KHG aldolase VCA1004_RS13920 PF07729 FCD domain VCA1004_RS13920 PF00392 Bacterial regulatory proteins, gntR family VCA1004_RS13930 PF08125 Mannitol dehydrogenase C-terminal domain VCA1004_RS13930 PF01232 Mannitol dehydrogenase Rossmann domain VCA1004_RS13935 PF00474 Sodium:solute symporter family VCA1004_RS13940 PF03786 D-mannonate dehydratase (UxuA) VCA1004_RS13945 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS13950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VCA1004_RS13950 PF13378 Enolase C-terminal domain-like VCA1004_RS13965 PF03480 Bacterial extracellular solute-binding protein, family 7 VCA1004_RS13970 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VCA1004_RS13975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VCA1004_RS13980 PF08787 Alginate lyase VCA1004_RS13985 PF09375 Imelysin VCA1004_RS13990 PF04261 Dyp-type peroxidase family VCA1004_RS13990 PF10518 TAT (twin-arginine translocation) pathway signal sequence VCA1004_RS13995 PF03239 Iron permease FTR1 family VCA1004_RS14005 PF03466 LysR substrate binding domain VCA1004_RS14005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS14015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VCA1004_RS14015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VCA1004_RS14020 PF00860 Permease family VCA1004_RS14025 PF00962 Adenosine/AMP deaminase VCA1004_RS14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS14030 PF03466 LysR substrate binding domain VCA1004_RS14035 PF08264 Anticodon-binding domain of tRNA VCA1004_RS14035 PF09334 tRNA synthetases class I (M) VCA1004_RS14035 PF01588 Putative tRNA binding domain VCA1004_RS14050 PF02627 Carboxymuconolactone decarboxylase family VCA1004_RS14055 PF13411 MerR HTH family regulatory protein VCA1004_RS14065 PF13276 HTH-like domain VCA1004_RS14065 PF00665 Integrase core domain VCA1004_RS14065 PF13333 Integrase core domain VCA1004_RS14075 PF01594 AI-2E family transporter VCA1004_RS14080 PF07690 Major Facilitator Superfamily VCA1004_RS14085 PF07690 Major Facilitator Superfamily VCA1004_RS14090 PF18364 Molybdopterin oxidoreductase N-terminal domain VCA1004_RS14090 PF01568 Molydopterin dinucleotide binding domain VCA1004_RS14090 PF00384 Molybdopterin oxidoreductase VCA1004_RS14095 PF03264 NapC/NirT cytochrome c family, N-terminal region VCA1004_RS14110 PF00440 Bacterial regulatory proteins, tetR family VCA1004_RS14115 PF00874 PRD domain VCA1004_RS14115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS14115 PF08279 HTH domain VCA1004_RS14115 PF05043 Mga helix-turn-helix domain VCA1004_RS14120 PF07071 KDGP aldolase VCA1004_RS14125 PF03841 L-seryl-tRNA selenium transferase VCA1004_RS14130 PF01979 Amidohydrolase family VCA1004_RS14170 PF01738 Dienelactone hydrolase family VCA1004_RS14180 PF04115 Ureidoglycolate lyase VCA1004_RS14185 PF09349 OHCU decarboxylase VCA1004_RS14185 PF01014 Uricase VCA1004_RS14195 PF00576 HIUase/Transthyretin family VCA1004_RS14200 PF00860 Permease family VCA1004_RS14205 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS14210 PF00474 Sodium:solute symporter family VCA1004_RS14220 PF00005 ABC transporter VCA1004_RS14225 PF00497 Bacterial extracellular solute-binding proteins, family 3 VCA1004_RS14230 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14235 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14240 PF00005 ABC transporter VCA1004_RS14240 PF12857 TOBE-like domain VCA1004_RS14245 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14260 PF00291 Pyridoxal-phosphate dependent enzyme VCA1004_RS14265 PF08443 RimK-like ATP-grasp domain VCA1004_RS14265 PF18030 RimK PreATP-grasp domain VCA1004_RS14270 PF18030 RimK PreATP-grasp domain VCA1004_RS14270 PF08443 RimK-like ATP-grasp domain VCA1004_RS14280 PF06865 Pyrimidine/purine nucleoside phosphorylase VCA1004_RS14290 PF13520 Amino acid permease VCA1004_RS14300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VCA1004_RS14320 PF02630 SCO1/SenC VCA1004_RS14330 PF00892 EamA-like transporter family VCA1004_RS14350 PF13181 Tetratricopeptide repeat VCA1004_RS14350 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) VCA1004_RS14355 PF03170 Bacterial cellulose synthase subunit VCA1004_RS14360 PF00535 Glycosyl transferase family 2 VCA1004_RS14360 PF07238 PilZ domain VCA1004_RS14360 PF03552 Cellulose synthase VCA1004_RS14365 PF06564 Cellulose biosynthesis protein BcsQ VCA1004_RS14375 PF13840 ACT domain VCA1004_RS14375 PF00696 Amino acid kinase family VCA1004_RS14380 PF06339 Ectoine synthase VCA1004_RS14385 PF00202 Aminotransferase class-III VCA1004_RS14390 PF00583 Acetyltransferase (GNAT) family VCA1004_RS14395 PF00962 Adenosine/AMP deaminase VCA1004_RS14400 PF00933 Glycosyl hydrolase family 3 N terminal domain VCA1004_RS14405 PF03702 Anhydro-N-acetylmuramic acid kinase VCA1004_RS14420 PF03412 Peptidase C39 family VCA1004_RS14420 PF00664 ABC transporter transmembrane region VCA1004_RS14420 PF00005 ABC transporter VCA1004_RS14425 PF16199 Radical_SAM C-terminal domain VCA1004_RS14425 PF04055 Radical SAM superfamily VCA1004_RS14435 PF12833 Helix-turn-helix domain VCA1004_RS14440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VCA1004_RS14440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VCA1004_RS14445 PF00083 Sugar (and other) transporter VCA1004_RS14455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VCA1004_RS14455 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal VCA1004_RS14455 PF10518 TAT (twin-arginine translocation) pathway signal sequence VCA1004_RS14460 PF00374 Nickel-dependent hydrogenase VCA1004_RS14465 PF01292 Prokaryotic cytochrome b561 VCA1004_RS14470 PF01750 Hydrogenase maturation protease VCA1004_RS14495 PF10928 Protein of unknown function (DUF2810) VCA1004_RS14505 PF06271 RDD family VCA1004_RS14515 PF00005 ABC transporter VCA1004_RS14520 PF01032 FecCD transport family VCA1004_RS14525 PF01032 FecCD transport family VCA1004_RS14530 PF00593 TonB dependent receptor VCA1004_RS14530 PF07715 TonB-dependent Receptor Plug Domain VCA1004_RS14535 PF01497 Periplasmic binding protein VCA1004_RS14550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VCA1004_RS14550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VCA1004_RS14555 PF01022 Bacterial regulatory protein, arsR family VCA1004_RS14565 PF12849 PBP superfamily domain VCA1004_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14575 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14580 PF00005 ABC transporter VCA1004_RS14585 PF01895 PhoU domain VCA1004_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS14595 PF03466 LysR substrate binding domain VCA1004_RS14600 PF00873 AcrB/AcrD/AcrF family VCA1004_RS14605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VCA1004_RS14605 PF00529 HlyD membrane-fusion protein of T1SS VCA1004_RS14610 PF03466 LysR substrate binding domain VCA1004_RS14610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS14620 PF01551 Peptidase family M23 VCA1004_RS14620 PF08525 Opacity-associated protein A N-terminal motif VCA1004_RS14620 PF01476 LysM domain VCA1004_RS14625 PF02492 CobW/HypB/UreG, nucleotide-binding domain VCA1004_RS14630 PF01730 UreF VCA1004_RS14640 PF02814 UreE urease accessory protein, N-terminal domain VCA1004_RS14640 PF05194 UreE urease accessory protein, C-terminal domain VCA1004_RS14650 PF01979 Amidohydrolase family VCA1004_RS14650 PF00449 Urease alpha-subunit, N-terminal domain VCA1004_RS14655 PF00699 Urease beta subunit VCA1004_RS14660 PF00547 Urease, gamma subunit VCA1004_RS14665 PF01774 UreD urease accessory protein VCA1004_RS14670 PF00465 Iron-containing alcohol dehydrogenase VCA1004_RS14675 PF05552 Conserved TM helix VCA1004_RS14675 PF00924 Mechanosensitive ion channel VCA1004_RS14680 PF00005 ABC transporter VCA1004_RS14685 PF00005 ABC transporter VCA1004_RS14685 PF12399 Branched-chain amino acid ATP-binding cassette transporter VCA1004_RS14690 PF02653 Branched-chain amino acid transport system / permease component VCA1004_RS14695 PF02653 Branched-chain amino acid transport system / permease component VCA1004_RS14705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VCA1004_RS14705 PF03466 LysR substrate binding domain VCA1004_RS14710 PF05899 Protein of unknown function (DUF861) VCA1004_RS14710 PF07883 Cupin domain VCA1004_RS14715 PF00672 HAMP domain VCA1004_RS14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS14715 PF00512 His Kinase A (phospho-acceptor) domain VCA1004_RS14720 PF00072 Response regulator receiver domain VCA1004_RS14720 PF00486 Transcriptional regulatory protein, C terminal VCA1004_RS14725 PF01219 Prokaryotic diacylglycerol kinase VCA1004_RS14730 PF08019 Phosphoethanolamine transferase EptA/EptB VCA1004_RS14730 PF00884 Sulfatase VCA1004_RS14735 PF00175 Oxidoreductase NAD-binding domain VCA1004_RS14735 PF00970 Oxidoreductase FAD-binding domain VCA1004_RS14740 PF12849 PBP superfamily domain VCA1004_RS14745 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14750 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14755 PF00005 ABC transporter VCA1004_RS14760 PF12849 PBP superfamily domain VCA1004_RS14765 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS14775 PF00005 ABC transporter VCA1004_RS14780 PF00990 Diguanylate cyclase, GGDEF domain VCA1004_RS14780 PF17155 Gammaproteobacterial periplasmic sensor domain VCA1004_RS14785 PF00677 Lumazine binding domain VCA1004_RS14790 PF00072 Response regulator receiver domain VCA1004_RS14790 PF00196 Bacterial regulatory proteins, luxR family VCA1004_RS14795 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VCA1004_RS14795 PF07730 Histidine kinase VCA1004_RS14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VCA1004_RS14795 PF00672 HAMP domain VCA1004_RS14800 PF13187 4Fe-4S dicluster domain VCA1004_RS14800 PF12838 4Fe-4S dicluster domain VCA1004_RS14810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VCA1004_RS14810 PF00384 Molybdopterin oxidoreductase VCA1004_RS14810 PF01568 Molydopterin dinucleotide binding domain VCA1004_RS14815 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VCA1004_RS14820 PF03264 NapC/NirT cytochrome c family, N-terminal region VCA1004_RS14835 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS14835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCA1004_RS14840 PF01081 KDPG and KHG aldolase VCA1004_RS14845 PF00920 Dehydratase family VCA1004_RS14850 PF01202 Shikimate kinase VCA1004_RS14855 PF02447 GntP family permease VCA1004_RS14860 PF00106 short chain dehydrogenase VCA1004_RS14865 PF00255 Glutathione peroxidase VCA1004_RS14870 PF18267 Rubredoxin NAD+ reductase C-terminal domain VCA1004_RS14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase VCA1004_RS14870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VCA1004_RS14870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VCA1004_RS14870 PF04324 BFD-like [2Fe-2S] binding domain VCA1004_RS14875 PF13806 Rieske-like [2Fe-2S] domain VCA1004_RS14885 PF01226 Formate/nitrite transporter VCA1004_RS14890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VCA1004_RS14890 PF10414 Sirohaem synthase dimerisation region VCA1004_RS14890 PF14824 Sirohaem biosynthesis protein central VCA1004_RS14900 PF01541 GIY-YIG catalytic domain VCA1004_RS14905 PF04337 Protein of unknown function, DUF480 VCA1004_RS14910 PF04363 Protein of unknown function (DUF496) VCA1004_RS14915 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VCA1004_RS14920 PF00271 Helicase conserved C-terminal domain VCA1004_RS14920 PF00270 DEAD/DEAH box helicase VCA1004_RS14925 PF00356 Bacterial regulatory proteins, lacI family VCA1004_RS14925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VCA1004_RS14930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VCA1004_RS14930 PF00381 PTS HPr component phosphorylation site VCA1004_RS14935 PF00294 pfkB family carbohydrate kinase VCA1004_RS14940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VCA1004_RS14940 PF02378 Phosphotransferase system, EIIC VCA1004_RS14945 PF13193 AMP-binding enzyme C-terminal domain VCA1004_RS14945 PF00501 AMP-binding enzyme VCA1004_RS14955 PF01040 UbiA prenyltransferase family VCA1004_RS14960 PF02628 Cytochrome oxidase assembly protein VCA1004_RS14980 PF00510 Cytochrome c oxidase subunit III VCA1004_RS14985 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VCA1004_RS14995 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VCA1004_RS14995 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VCA1004_RS15005 PF00375 Sodium:dicarboxylate symporter family VCA1004_RS15010 PF11008 Protein of unknown function (DUF2846) VCA1004_RS15025 PF02798 Glutathione S-transferase, N-terminal domain VCA1004_RS15045 PF06496 Protein of unknown function (DUF1097) VCA1004_RS15050 PF00892 EamA-like transporter family VCA1004_RS15055 PF02142 MGS-like domain VCA1004_RS15055 PF00781 Diacylglycerol kinase catalytic domain VCA1004_RS15060 PF13416 Bacterial extracellular solute-binding protein VCA1004_RS15065 PF00005 ABC transporter VCA1004_RS15065 PF08402 TOBE domain VCA1004_RS15070 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS15075 PF00528 Binding-protein-dependent transport system inner membrane component VCA1004_RS15080 PF01272 Transcription elongation factor, GreA/GreB, C-term VCA1004_RS15080 PF14760 Rnk N-terminus VCA1004_RS15090 PF01810 LysE type translocator VCA1004_RS15095 PF01844 HNH endonuclease VCA1004_RS15100 PF13599 Pentapeptide repeats (9 copies) VCA1004_RS15105 PF00313 'Cold-shock' DNA-binding domain VCA1004_RS15110 PF00474 Sodium:solute symporter family VCA1004_RS15120 PF00171 Aldehyde dehydrogenase family VCA1004_RS15120 PF01619 Proline dehydrogenase VCA1004_RS15120 PF14850 DNA-binding domain of Proline dehydrogenase VCA1004_RS15120 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VCA1004_RS15125 PF12833 Helix-turn-helix domain VCA1004_RS15130 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VCA1004_RS15130 PF01243 Pyridoxamine 5'-phosphate oxidase VCA1004_RS15135 PF13718 GNAT acetyltransferase 2 VCA1004_RS15135 PF05127 Helicase VCA1004_RS15140 PF02195 ParB-like nuclease domain VCA1004_RS15140 PF08775 ParB family VCA1004_RS15145 PF13614 AAA domain VCA1004_RS15145 PF18607 ParA helix turn helix domain