locus-tag	class	description
OCU35_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
OCU35_RS00010	COG0592	DNA-directed DNA polymerase activity
OCU35_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
OCU35_RS00020	COG0187	DNA topoisomerase II activity
OCU35_RS00025	COG0071	Belongs to the small heat shock protein (HSP20) family
OCU35_RS00045	COG3977	Valine--pyruvate aminotransferase
OCU35_RS00050	COG0751	glycine-tRNA ligase activity
OCU35_RS00055	COG0752	glycyl-tRNA synthetase alpha subunit
OCU35_RS00060	COG2119	membrane
OCU35_RS00075	COG0604	alcohol dehydrogenase
OCU35_RS00080	COG0183	Belongs to the thiolase family
OCU35_RS00090	COG1739	Uncharacterized protein family UPF0029
OCU35_RS00095	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OCU35_RS00145	COG0352	thiamine-phosphate diphosphorylase activity
OCU35_RS00150	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OCU35_RS00160	COG2022	thiamine diphosphate biosynthetic process
OCU35_RS00190	COG3220	belongs to the UPF0276 family
OCU35_RS00200	COG0210	DNA helicase
OCU35_RS00205	COG2095	MarC family integral membrane protein
OCU35_RS00210	COG0405	Gamma-glutamyltransferase
OCU35_RS00215	COG1280	lysine exporter protein (LysE YggA)
OCU35_RS00220	COG2962	Rard protein
OCU35_RS00225	COG0514	ATP-dependent DNA helicase (RecQ)
OCU35_RS00235	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
OCU35_RS00240	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OCU35_RS00245	COG0248	Ppx GppA phosphatase
OCU35_RS00250	COG0513	Belongs to the DEAD box helicase family
OCU35_RS00255	COG3118	belongs to the thioredoxin family
OCU35_RS00270	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
OCU35_RS00275	COG2871	sodium ion transport
OCU35_RS00315	COG0583	DNA-binding transcription factor activity
OCU35_RS00320	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OCU35_RS00330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCU35_RS00335	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCU35_RS00340	COG1309	transcriptional regulator
OCU35_RS00345	COG0210	DNA helicase
OCU35_RS00385	COG0742	ribosomal rna small subunit methyltransferase
OCU35_RS00390	COG0552	protein localization to endoplasmic reticulum
OCU35_RS00395	COG2884	Cell division ATP-binding protein ftsE
OCU35_RS00400	COG2177	Part of the ABC transporter FtsEX involved in
OCU35_RS00410	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OCU35_RS00415	COG0705	Rhomboid family
OCU35_RS00420	COG3161	chorismate lyase activity
OCU35_RS00425	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
OCU35_RS00430	COG2937	Belongs to the GPAT DAPAT family
OCU35_RS00435	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
OCU35_RS00445	COG0534	Mate efflux family protein
OCU35_RS00450	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OCU35_RS00465	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OCU35_RS00470	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OCU35_RS00475	COG0724	RNA recognition motif
OCU35_RS00535	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OCU35_RS00545	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OCU35_RS00550	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
OCU35_RS00550	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
OCU35_RS00555	COG1072	(Pantothenic acid kinase))
OCU35_RS00580	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
OCU35_RS00585	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OCU35_RS00590	COG0250	Participates in transcription elongation, termination and antitermination
OCU35_RS00600	COG0081	regulation of translation
OCU35_RS00615	COG0085	RNA polymerase activity
OCU35_RS00620	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OCU35_RS00625	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
OCU35_RS00630	COG2816	NAD+ diphosphatase activity
OCU35_RS00640	COG1560	Kdo2-lipid A biosynthetic process
OCU35_RS00645	COG1560	Kdo2-lipid A biosynthetic process
OCU35_RS00650	COG1309	transcriptional regulator
OCU35_RS00655	COG0756	dUTP diphosphatase activity
OCU35_RS00660	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OCU35_RS00665	COG2003	Belongs to the UPF0758 family
OCU35_RS00670	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OCU35_RS00675	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
OCU35_RS00680	COG1758	RNA polymerase activity
OCU35_RS00685	COG0194	GDP metabolic process
OCU35_RS00700	COG2003	Belongs to the UPF0758 family
OCU35_RS00735	COG1561	YicC-like family, N-terminal region
OCU35_RS00740	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
OCU35_RS00755	COG3068	Protein conserved in bacteria
OCU35_RS00760	COG1253	flavin adenine dinucleotide binding
OCU35_RS00775	COG2207	Transcriptional regulator
OCU35_RS00785	COG0151	Belongs to the GarS family
OCU35_RS00795	COG0789	Transcriptional regulator
OCU35_RS00810	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
OCU35_RS00825	COG0439	Biotin carboxylase
OCU35_RS00830	COG0511	ligase activity, forming carbon-carbon bonds
OCU35_RS00835	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
OCU35_RS00840	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OCU35_RS00855	COG2814	Major facilitator Superfamily
OCU35_RS00860	COG0784	Response regulator, receiver
OCU35_RS00860	COG2205	protein histidine kinase activity
OCU35_RS00860	COG2198	Histidine kinase
OCU35_RS00870	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS00885	COG4232	protein-disulfide reductase activity
OCU35_RS00890	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
OCU35_RS00895	COG1027	Aspartate ammonia-lyase
OCU35_RS00900	COG3030	protein affecting phage T7 exclusion by the F plasmid
OCU35_RS00905	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
OCU35_RS00910	COG2205	protein histidine kinase activity
OCU35_RS00915	COG0745	RESPONSE REGULATOR receiver
OCU35_RS00935	COG0205	6-phosphofructokinase activity
OCU35_RS00955	COG1494	fructose-1,6-bisphosphatase
OCU35_RS00965	COG4942	peptidase
OCU35_RS00970	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
OCU35_RS00975	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OCU35_RS00980	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
OCU35_RS00985	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
OCU35_RS00995	COG0534	Mate efflux family protein
OCU35_RS01015	COG1119	ATPase activity
OCU35_RS01020	COG0488	(ABC) transporter
OCU35_RS01030	COG1509	lysine 2,3-aminomutase activity
OCU35_RS01035	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
OCU35_RS01045	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
OCU35_RS01050	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
OCU35_RS01055	COG1053	succinate dehydrogenase
OCU35_RS01060	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
OCU35_RS01075	COG0471	metal ion transport
OCU35_RS01075	COG3273	potassium ion transport
OCU35_RS01080	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
OCU35_RS01085	COG1575	Belongs to the MenA family. Type 1 subfamily
OCU35_RS01095	COG0688	phosphatidylethanolamine metabolic process
OCU35_RS01100	COG1162	GTPase activity
OCU35_RS01155	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OCU35_RS01160	COG0802	atpase or kinase
OCU35_RS01165	COG0860	N-Acetylmuramoyl-L-alanine amidase
OCU35_RS01170	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
OCU35_RS01175	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
OCU35_RS01180	COG1923	regulation of RNA biosynthetic process
OCU35_RS01185	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OCU35_RS01190	COG0330	HflC and HflK could
OCU35_RS01195	COG0330	HflC and HflK could
OCU35_RS01200	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
OCU35_RS01205	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
OCU35_RS01210	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OCU35_RS01210	COG1017	nitric oxide dioxygenase activity
OCU35_RS01215	COG1959	2 iron, 2 sulfur cluster binding
OCU35_RS01220	COG0557	exoribonuclease II activity
OCU35_RS01225	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OCU35_RS01230	COG0778	Nitroreductase
OCU35_RS01240	COG2965	DNA replication, synthesis of RNA primer
OCU35_RS01265	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OCU35_RS01315	COG0582	viral genome integration into host DNA
OCU35_RS01325	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OCU35_RS01345	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
OCU35_RS01350	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OCU35_RS01355	COG0175	sulfate reduction
OCU35_RS01450	COG1410	methionine synthase
OCU35_RS01450	COG0646	methionine synthase
OCU35_RS01455	COG0527	aspartate kinase activity
OCU35_RS01460	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OCU35_RS01470	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OCU35_RS01490	COG2199	diguanylate cyclase activity
OCU35_RS01490	COG2200	EAL domain
OCU35_RS01510	COG1450	Type ii and iii secretion system protein
OCU35_RS01515	COG3409	Peptidoglycan-binding domain 1 protein
OCU35_RS01515	COG3267	Type II secretory pathway component ExeA
OCU35_RS01525	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OCU35_RS01530	COG1459	type II secretion system
OCU35_RS01540	COG2165	general secretion pathway protein
OCU35_RS01550	COG2165	general secretion pathway protein
OCU35_RS01580	COG1077	Cell shape determining protein MreB Mrl
OCU35_RS01585	COG1792	Involved in formation and maintenance of cell shape
OCU35_RS01590	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
OCU35_RS01595	COG0424	maF-like protein
OCU35_RS01605	COG3164	Protein of unknown function
OCU35_RS01610	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OCU35_RS01615	COG0312	modulator of DNA gyrase
OCU35_RS01620	COG3028	Belongs to the UPF0307 family
OCU35_RS01625	COG0312	modulator of DNA gyrase
OCU35_RS01630	COG2239	Acts as a magnesium transporter
OCU35_RS01635	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCU35_RS01640	COG1660	Displays ATPase and GTPase activities
OCU35_RS01645	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCU35_RS01660	COG1137	ATPase activity
OCU35_RS01675	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
OCU35_RS01680	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
OCU35_RS01680	COG0517	IMP dehydrogenase activity
OCU35_RS01690	COG1127	ABC transporter
OCU35_RS01695	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
OCU35_RS01700	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
OCU35_RS01705	COG2854	intermembrane phospholipid transfer
OCU35_RS01715	COG5007	Belongs to the BolA IbaG family
OCU35_RS01725	COG0204	Acyl-transferase
OCU35_RS01730	COG0251	oxidation-reduction process
OCU35_RS01735	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
OCU35_RS01765	COG0525	valine-tRNA ligase activity
OCU35_RS01770	COG2927	DNA polymerase III (CHI subunit)
OCU35_RS01780	COG0795	lipopolysaccharide-transporting ATPase activity
OCU35_RS01785	COG0795	lipopolysaccharide-transporting ATPase activity
OCU35_RS01800	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS01805	COG1070	Carbohydrate kinase
OCU35_RS01810	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
OCU35_RS01815	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OCU35_RS01820	COG2115	Belongs to the xylose isomerase family
OCU35_RS01825	COG3842	ATPase activity
OCU35_RS01830	COG3842	ATPase activity
OCU35_RS01840	COG1175	transmembrane transport
OCU35_RS01845	COG0395	ABC-type sugar transport system, permease component
OCU35_RS01850	COG2382	esterase
OCU35_RS01850	COG3507	Belongs to the glycosyl hydrolase 43 family
OCU35_RS01850	COG3693	PFAM glycoside hydrolase, family 10
OCU35_RS01865	COG2115	Belongs to the xylose isomerase family
OCU35_RS01870	COG1609	Transcriptional regulator
OCU35_RS01870	COG2207	Transcriptional regulator
OCU35_RS01895	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCU35_RS01915	COG2205	protein histidine kinase activity
OCU35_RS01920	COG0745	RESPONSE REGULATOR receiver
OCU35_RS01945	COG2217	Heavy metal translocating P-type atpase
OCU35_RS01950	COG0789	Transcriptional regulator
OCU35_RS01985	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OCU35_RS01990	COG1349	DNA-binding transcription factor activity
OCU35_RS01995	COG0363	glucosamine-6-phosphate deaminase activity
OCU35_RS02000	COG3722	fumarate hydratase activity
OCU35_RS02005	COG0246	Mannitol dehydrogenase
OCU35_RS02010	COG2213	PTS system mannitol-specific
OCU35_RS02010	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCU35_RS02070	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
OCU35_RS02075	COG1194	a g-specific adenine glycosylase
OCU35_RS02090	COG2066	Belongs to the glutaminase family
OCU35_RS02095	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OCU35_RS02100	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
OCU35_RS02110	COG0762	integral membrane protein
OCU35_RS02115	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OCU35_RS02120	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OCU35_RS02135	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
OCU35_RS02140	COG1678	Uncharacterized ACR, COG1678
OCU35_RS02145	COG0189	ligase activity
OCU35_RS02150	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OCU35_RS02155	COG2356	endonuclease I
OCU35_RS02160	COG3091	SprT-like family
OCU35_RS02170	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
OCU35_RS02175	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
OCU35_RS02180	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OCU35_RS02190	COG0191	fructose-bisphosphate aldolase activity
OCU35_RS02195	COG0668	transmembrane transport
OCU35_RS02205	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OCU35_RS02210	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
OCU35_RS02215	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OCU35_RS02230	COG3079	Belongs to the UPF0149 family
OCU35_RS02235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OCU35_RS02240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OCU35_RS02255	COG0354	folic acid binding
OCU35_RS02260	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
OCU35_RS02265	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
OCU35_RS02280	COG3026	antisigma factor binding
OCU35_RS02290	COG0481	GTPase activity
OCU35_RS02300	COG0571	ribonuclease III activity
OCU35_RS02305	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
OCU35_RS02310	COG1381	Involved in DNA repair and RecF pathway recombination
OCU35_RS02315	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
OCU35_RS02320	COG0736	holo-[acyl-carrier-protein] synthase activity
OCU35_RS02325	COG3437	response regulator, receiver
OCU35_RS02325	COG3850	Histidine kinase
OCU35_RS02325	COG4999	Histidine kinase
OCU35_RS02325	COG2205	protein histidine kinase activity
OCU35_RS02335	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
OCU35_RS02340	COG3956	TIGRFAM MazG family protein
OCU35_RS02350	COG0148	phosphopyruvate hydratase activity
OCU35_RS02360	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
OCU35_RS02365	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
OCU35_RS02370	COG0585	pseudouridine synthase activity
OCU35_RS02375	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
OCU35_RS02380	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
OCU35_RS02385	COG1388	LysM domain
OCU35_RS02385	COG4942	peptidase
OCU35_RS02390	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OCU35_RS02395	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
OCU35_RS02405	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
OCU35_RS02410	COG2137	regulation of response to DNA damage stimulus
OCU35_RS02420	COG0527	aspartate kinase activity
OCU35_RS02470	COG3630	sodium ion export across plasma membrane
OCU35_RS02475	COG5016	pyruvate
OCU35_RS02475	COG0511	ligase activity, forming carbon-carbon bonds
OCU35_RS02480	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
OCU35_RS02485	COG1238	metal cluster binding
OCU35_RS02490	COG0612	Peptidase, M16
OCU35_RS02500	COG1854	S-ribosylhomocysteine lyase activity
OCU35_RS02505	COG4536	flavin adenine dinucleotide binding
OCU35_RS02510	COG4137	Cytochrome C assembly protein
OCU35_RS02515	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OCU35_RS02530	COG0336	Belongs to the RNA methyltransferase TrmD family
OCU35_RS02535	COG0335	large ribosomal subunit rRNA binding
OCU35_RS02540	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
OCU35_RS02545	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
OCU35_RS02550	COG0237	dephospho-CoA kinase activity
OCU35_RS02560	COG1459	type II secretion system
OCU35_RS02565	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OCU35_RS02575	COG0157	Belongs to the NadC ModD family
OCU35_RS02585	COG2186	Transcriptional regulator
OCU35_RS02590	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
OCU35_RS02595	COG0508	dehydrogenase complex catalyzes the overall conversion of
OCU35_RS02600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OCU35_RS02610	COG0288	reversible hydration of carbon dioxide
OCU35_RS02615	COG0659	secondary active sulfate transmembrane transporter activity
OCU35_RS02620	COG1131	(ABC) transporter
OCU35_RS02625	COG0842	Transport permease protein
OCU35_RS02630	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
OCU35_RS02635	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
OCU35_RS02640	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OCU35_RS02650	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OCU35_RS02655	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
OCU35_RS02665	COG1643	Atp-dependent helicase
OCU35_RS02670	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OCU35_RS02675	COG1752	Esterase of the alpha-beta hydrolase superfamily
OCU35_RS02680	COG1049	propionate catabolic process, 2-methylcitrate cycle
OCU35_RS02685	COG1929	Belongs to the glycerate kinase type-1 family
OCU35_RS02690	COG2610	gluconate transmembrane transporter activity
OCU35_RS02695	COG3835	regulator
OCU35_RS02710	COG0004	ammonium transporteR
OCU35_RS02715	COG1840	ABC-type Fe3 transport system, periplasmic component
OCU35_RS02725	COG3842	ATPase activity
OCU35_RS02740	COG4608	Belongs to the ABC transporter superfamily
OCU35_RS02745	COG0444	Belongs to the ABC transporter superfamily
OCU35_RS02760	COG0747	negative chemotaxis
OCU35_RS02765	COG3850	Histidine kinase
OCU35_RS02765	COG3437	response regulator, receiver
OCU35_RS02765	COG2205	protein histidine kinase activity
OCU35_RS02765	COG4999	Histidine kinase
OCU35_RS02770	COG2813	Specifically methylates the guanine in position
OCU35_RS02775	COG0628	permease
OCU35_RS02790	COG1566	PFAM secretion protein HlyD family protein
OCU35_RS02795	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCU35_RS02800	COG0739	heme binding
OCU35_RS02805	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OCU35_RS02810	COG2239	Acts as a magnesium transporter
OCU35_RS02815	COG2027	D-alanyl-D-alanine carboxypeptidase
OCU35_RS02820	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
OCU35_RS02825	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
OCU35_RS02830	COG1534	Rna-binding protein
OCU35_RS02835	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
OCU35_RS02840	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OCU35_RS02845	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OCU35_RS02850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OCU35_RS02855	COG0483	inositol monophosphate 1-phosphatase activity
OCU35_RS02875	COG0822	iron-sulfur transferase activity
OCU35_RS02880	COG0316	Belongs to the HesB IscA family
OCU35_RS02890	COG0443	Heat shock 70 kDa protein
OCU35_RS02895	COG0633	Ferredoxin
OCU35_RS02900	COG2975	iron-sulfur cluster assembly
OCU35_RS02905	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
OCU35_RS02930	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
OCU35_RS02935	COG0124	histidyl-tRNA synthetase
OCU35_RS02940	COG2976	Protein conserved in bacteria
OCU35_RS02945	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OCU35_RS02950	COG1160	GTP binding
OCU35_RS02965	COG0517	IMP dehydrogenase activity
OCU35_RS02965	COG0516	GMP reductase activity
OCU35_RS02975	COG3122	Protein conserved in bacteria
OCU35_RS02980	COG4134	Bacterial extracellular solute-binding protein
OCU35_RS02985	COG4135	transport system, permease component
OCU35_RS02990	COG4136	ATPase activity
OCU35_RS02995	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OCU35_RS03000	COG2116	formate transmembrane transporter activity
OCU35_RS03005	COG0583	DNA-binding transcription factor activity
OCU35_RS03015	COG0798	PFAM Bile acid sodium symporter
OCU35_RS03025	COG3181	Tripartite tricarboxylate transporter family receptor
OCU35_RS03050	COG0110	maltose O-acetyltransferase activity
OCU35_RS03055	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS03060	COG0583	DNA-binding transcription factor activity
OCU35_RS03065	COG4221	oxidoreductase activity
OCU35_RS03075	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OCU35_RS03080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OCU35_RS03085	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
OCU35_RS03095	COG0765	amino acid transport
OCU35_RS03110	COG1904	glucuronate isomerase
OCU35_RS03115	COG1917	Cupin 2, conserved barrel domain protein
OCU35_RS03120	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS03135	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
OCU35_RS03145	COG0823	Involved in the tonB-independent uptake of proteins
OCU35_RS03150	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS03160	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
OCU35_RS03165	COG2867	negative regulation of translational initiation
OCU35_RS03170	COG2914	Belongs to the UPF0125 (RnfH) family
OCU35_RS03175	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OCU35_RS03180	COG0497	DNA recombination
OCU35_RS03185	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
OCU35_RS03190	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
OCU35_RS03195	COG0443	Heat shock 70 kDa protein
OCU35_RS03200	COG0484	heat shock protein binding
OCU35_RS03230	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
OCU35_RS03260	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
OCU35_RS03265	COG0047	phosphoribosylformylglycinamidine synthase activity
OCU35_RS03265	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OCU35_RS03275	COG2195	Cleaves the N-terminal amino acid of tripeptides
OCU35_RS03280	COG2252	PERMEase
OCU35_RS03285	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
OCU35_RS03290	COG1073	alpha beta
OCU35_RS03300	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
OCU35_RS03305	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
OCU35_RS03315	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OCU35_RS03315	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OCU35_RS03335	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OCU35_RS03340	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
OCU35_RS03345	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
OCU35_RS03350	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
OCU35_RS03355	COG0142	geranyltranstransferase activity
OCU35_RS03360	COG1722	exodeoxyribonuclease VII activity
OCU35_RS03365	COG0301	tRNA thio-modification
OCU35_RS03365	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OCU35_RS03370	COG0583	DNA-binding transcription factor activity
OCU35_RS03375	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
OCU35_RS03385	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OCU35_RS03390	COG1611	Belongs to the LOG family
OCU35_RS03400	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
OCU35_RS03400	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
OCU35_RS03410	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
OCU35_RS03415	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OCU35_RS03425	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
OCU35_RS03430	COG1671	Belongs to the UPF0178 family
OCU35_RS03455	COG3098	single-species biofilm formation
OCU35_RS03460	COG0564	pseudouridine synthase activity
OCU35_RS03470	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
OCU35_RS03475	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
OCU35_RS03480	COG0024	Methionine aminopeptidase
OCU35_RS03505	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OCU35_RS03510	COG0575	Belongs to the CDS family
OCU35_RS03520	COG0750	zinc metalloprotease
OCU35_RS03525	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OCU35_RS03530	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
OCU35_RS03535	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OCU35_RS03540	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OCU35_RS03555	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
OCU35_RS03560	COG0587	DNA-directed DNA polymerase activity
OCU35_RS03565	COG0825	malonyl-CoA metabolic process
OCU35_RS03580	COG0347	Belongs to the P(II) protein family
OCU35_RS03585	COG3021	interspecies interaction between organisms
OCU35_RS03590	COG0741	lytic transglycosylase activity
OCU35_RS03590	COG1388	LysM domain
OCU35_RS03595	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OCU35_RS03600	COG2226	methyltransferase
OCU35_RS03605	COG0328	RNA-DNA hybrid ribonuclease activity
OCU35_RS03620	COG1960	acyl-CoA dehydrogenase activity
OCU35_RS03625	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
OCU35_RS03630	COG0121	glutamine amidotransferase
OCU35_RS03635	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
OCU35_RS03640	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
OCU35_RS03645	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
OCU35_RS03655	COG3507	Belongs to the glycosyl hydrolase 43 family
OCU35_RS03665	COG1393	Belongs to the ArsC family
OCU35_RS03670	COG4783	chaperone-mediated protein folding
OCU35_RS03685	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OCU35_RS03690	COG2716	regulation of RNA biosynthetic process
OCU35_RS03695	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OCU35_RS03700	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
OCU35_RS03715	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OCU35_RS03720	COG1393	Belongs to the ArsC family
OCU35_RS03740	COG2837	iron assimilation
OCU35_RS03745	COG2190	(PTS) system
OCU35_RS03755	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCU35_RS03765	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
OCU35_RS03770	COG3115	cell septum assembly
OCU35_RS03785	COG0330	HflC and HflK could
OCU35_RS03790	COG3118	belongs to the thioredoxin family
OCU35_RS03795	COG1090	epimerase
OCU35_RS03820	COG0622	Phosphoesterase
OCU35_RS03830	COG3710	Transcriptional regulator
OCU35_RS03835	COG0326	Molecular chaperone. Has ATPase activity
OCU35_RS03845	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OCU35_RS03855	COG0367	asparagine synthase
OCU35_RS03860	COG2203	Gaf domain
OCU35_RS03860	COG4251	negative regulation of phosphorylation
OCU35_RS03860	COG5001	Diguanylate cyclase
OCU35_RS03860	COG3706	GGDEF domain
OCU35_RS03865	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OCU35_RS03865	COG4651	solute:proton antiporter activity
OCU35_RS03870	COG1846	Transcriptional regulator
OCU35_RS03870	COG1940	carbohydrate kinase activity
OCU35_RS03875	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OCU35_RS03880	COG0363	glucosamine-6-phosphate deaminase activity
OCU35_RS03885	COG1263	PTS System
OCU35_RS03885	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OCU35_RS03885	COG2190	(PTS) system
OCU35_RS03890	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OCU35_RS03900	COG0735	belongs to the Fur family
OCU35_RS03915	COG0596	Alpha beta hydrolase
OCU35_RS03920	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
OCU35_RS03925	COG0033	Phosphoglucomutase
OCU35_RS03935	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OCU35_RS03940	COG1609	Transcriptional regulator
OCU35_RS03970	COG4580	involved in the transport of maltose and maltodextrins
OCU35_RS03975	COG0372	Belongs to the citrate synthase family
OCU35_RS03985	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
OCU35_RS03990	COG1053	succinate dehydrogenase
OCU35_RS04000	COG0567	Dehydrogenase, E1 component
OCU35_RS04005	COG0508	dehydrogenase complex catalyzes the overall conversion of
OCU35_RS04020	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OCU35_RS04025	COG1121	(ABC) transporter
OCU35_RS04030	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
OCU35_RS04035	COG1918	ferrous iron import across plasma membrane
OCU35_RS04060	COG0733	neurotransmitter:sodium symporter activity
OCU35_RS04065	COG0583	DNA-binding transcription factor activity
OCU35_RS04070	COG0534	Mate efflux family protein
OCU35_RS04090	COG2801	Transposase and inactivated derivatives
OCU35_RS04115	COG1227	inorganic diphosphatase activity
OCU35_RS04125	COG2963	transposase activity
OCU35_RS04135	COG3102	Protein conserved in bacteria
OCU35_RS04140	COG0788	formyltetrahydrofolate deformylase activity
OCU35_RS04145	COG1199	ATP-dependent helicase activity
OCU35_RS04150	COG1214	PFAM Peptidase M22, glycoprotease
OCU35_RS04160	COG2226	methyltransferase
OCU35_RS04160	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OCU35_RS04160	COG0596	Alpha beta hydrolase
OCU35_RS04165	COG0318	PFAM AMP-dependent synthetase and ligase
OCU35_RS04170	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
OCU35_RS04175	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
OCU35_RS04180	COG2894	cell division
OCU35_RS04185	COG0850	regulation of cytokinetic process
OCU35_RS04190	COG3100	YcgL domain-containing protein
OCU35_RS04195	COG2951	lytic endotransglycosylase activity
OCU35_RS04200	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
OCU35_RS04210	COG0583	DNA-binding transcription factor activity
OCU35_RS04225	COG1472	Belongs to the glycosyl hydrolase 3 family
OCU35_RS04245	COG1494	fructose-1,6-bisphosphatase
OCU35_RS04250	COG0698	ribose 5-phosphate isomerase
OCU35_RS04255	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
OCU35_RS04265	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
OCU35_RS04265	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
OCU35_RS04275	COG2376	Dihydroxyacetone kinase
OCU35_RS04280	COG1461	Dihydroxyacetone kinase
OCU35_RS04290	COG0679	Auxin Efflux Carrier
OCU35_RS04310	COG0697	spore germination
OCU35_RS04315	COG1396	sequence-specific DNA binding
OCU35_RS04320	COG3135	benzoate transporter
OCU35_RS04335	COG0667	Aldo Keto reductase
OCU35_RS04370	COG0659	secondary active sulfate transmembrane transporter activity
OCU35_RS04375	COG1530	ribonuclease E activity
OCU35_RS04380	COG0564	pseudouridine synthase activity
OCU35_RS04385	COG0424	maF-like protein
OCU35_RS04390	COG1399	metal-binding, possibly nucleic acid-binding protein
OCU35_RS04395	COG0333	Belongs to the bacterial ribosomal protein bL32 family
OCU35_RS04400	COG0416	fatty acid biosynthetic process
OCU35_RS04405	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OCU35_RS04435	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
OCU35_RS04440	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
OCU35_RS04445	COG0470	DNA polymerase III
OCU35_RS04450	COG0084	hydrolase, TatD family'
OCU35_RS04455	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OCU35_RS04455	COG1263	PTS System
OCU35_RS04470	COG0733	neurotransmitter:sodium symporter activity
OCU35_RS04480	COG4667	esterase of the alpha-beta hydrolase superfamily
OCU35_RS04485	COG1940	carbohydrate kinase activity
OCU35_RS04495	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OCU35_RS04495	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OCU35_RS04500	COG0489	protein tyrosine kinase activity
OCU35_RS04505	COG0572	uridine kinase
OCU35_RS04510	COG2982	Protein involved in outer membrane biogenesis
OCU35_RS04515	COG1794	racemase activity, acting on amino acids and derivatives
OCU35_RS04525	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OCU35_RS04530	COG3069	C4-dicarboxylate transmembrane transporter activity
OCU35_RS04540	COG1902	pentaerythritol trinitrate reductase activity
OCU35_RS04545	COG2095	MarC family integral membrane protein
OCU35_RS04555	COG1595	DNA-templated transcription, initiation
OCU35_RS04565	COG0737	Belongs to the 5'-nucleotidase family
OCU35_RS04570	COG0583	DNA-binding transcription factor activity
OCU35_RS04585	COG4133	protoheme IX ABC transporter activity
OCU35_RS04590	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OCU35_RS04595	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OCU35_RS04610	COG1138	Cytochrome C-type biogenesis protein
OCU35_RS04615	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OCU35_RS04625	COG4235	cytochrome complex assembly
OCU35_RS04625	COG3088	subunit of a heme lyase
OCU35_RS04630	COG2853	Lipoprotein
OCU35_RS04650	COG2067	long-chain fatty acid transport protein
OCU35_RS04660	COG1595	DNA-templated transcription, initiation
OCU35_RS04665	COG0183	Belongs to the thiolase family
OCU35_RS04670	COG1024	Enoyl-CoA hydratase
OCU35_RS04670	COG1250	3-hydroxyacyl-CoA dehydrogenase
OCU35_RS04680	COG1025	Belongs to the peptidase M16 family
OCU35_RS04685	COG2062	phosphohistidine phosphatase, SixA
OCU35_RS04690	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
OCU35_RS04695	COG2840	Smr protein MutS2
OCU35_RS04700	COG2890	protein-(glutamine-N5) methyltransferase activity
OCU35_RS04705	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
OCU35_RS04710	COG2860	membrane
OCU35_RS04715	COG3101	peptidyl-lysine hydroxylation
OCU35_RS04735	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OCU35_RS04740	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OCU35_RS04745	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OCU35_RS04755	COG0101	tRNA pseudouridine synthase activity
OCU35_RS04760	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
OCU35_RS04765	COG0285	dihydrofolate synthase activity
OCU35_RS04770	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
OCU35_RS04775	COG1286	toxin biosynthetic process
OCU35_RS04780	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
OCU35_RS04785	COG2963	transposase activity
OCU35_RS04795	COG0583	DNA-binding transcription factor activity
OCU35_RS04800	COG0745	RESPONSE REGULATOR receiver
OCU35_RS04805	COG2832	Protein of unknown function (DUF454)
OCU35_RS04810	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OCU35_RS04825	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
OCU35_RS04830	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OCU35_RS04840	COG2983	Belongs to the UPF0260 family
OCU35_RS04850	COG2226	methyltransferase
OCU35_RS04855	COG0676	glucose-6-phosphate 1-epimerase activity
OCU35_RS04860	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OCU35_RS04865	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OCU35_RS04870	COG3139	Protein of unknown function (DUF1315)
OCU35_RS04880	COG0252	asparaginase activity
OCU35_RS04885	COG0616	signal peptide processing
OCU35_RS04890	COG0446	pyridine nucleotide-disulphide oxidoreductase
OCU35_RS04890	COG1902	pentaerythritol trinitrate reductase activity
OCU35_RS04895	COG0778	Nitroreductase
OCU35_RS04900	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OCU35_RS04910	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS04915	COG0616	signal peptide processing
OCU35_RS04930	COG0539	negative regulation of cytoplasmic translation
OCU35_RS04935	COG0776	regulation of translation
OCU35_RS04940	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
OCU35_RS04945	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
OCU35_RS04960	COG0583	DNA-binding transcription factor activity
OCU35_RS04970	COG0686	Belongs to the AlaDH PNT family
OCU35_RS04975	COG1522	sequence-specific DNA binding
OCU35_RS04990	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OCU35_RS05005	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OCU35_RS05010	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
OCU35_RS05015	COG0156	8-amino-7-oxononanoate synthase activity
OCU35_RS05020	COG1073	alpha beta
OCU35_RS05020	COG2226	methyltransferase
OCU35_RS05025	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
OCU35_RS05035	COG0501	Belongs to the peptidase M48B family
OCU35_RS05045	COG0300	oxidoreductase activity
OCU35_RS05060	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OCU35_RS05070	COG2268	Band 7 protein
OCU35_RS05095	COG1609	Transcriptional regulator
OCU35_RS05105	COG1434	Gram-negative-bacterium-type cell wall biogenesis
OCU35_RS05110	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OCU35_RS05115	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
OCU35_RS05120	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
OCU35_RS05125	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
OCU35_RS05150	COG4459	periplasmic nitrate reductase
OCU35_RS05155	COG3005	denitrification pathway
OCU35_RS05160	COG0243	molybdopterin cofactor binding
OCU35_RS05170	COG4106	trans-aconitate 2-methyltransferase activity
OCU35_RS05195	COG0632	four-way junction helicase activity
OCU35_RS05205	COG1271	oxidase subunit
OCU35_RS05210	COG1294	oxidase, subunit
OCU35_RS05215	COG4890	Cyd operon protein YbgT
OCU35_RS05225	COG0824	Thioesterase
OCU35_RS05230	COG0811	peptide transport
OCU35_RS05245	COG0823	Involved in the tonB-independent uptake of proteins
OCU35_RS05250	COG2885	chlorophyll binding
OCU35_RS05255	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
OCU35_RS05260	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
OCU35_RS05280	COG0786	glutamate:sodium symporter activity
OCU35_RS05285	COG0318	PFAM AMP-dependent synthetase and ligase
OCU35_RS05295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OCU35_RS05300	COG0514	ATP-dependent DNA helicase (RecQ)
OCU35_RS05305	COG0564	pseudouridine synthase activity
OCU35_RS05320	COG0674	pyruvate-flavodoxin oxidoreductase activity
OCU35_RS05325	COG0493	'glutamate synthase
OCU35_RS05335	COG1024	Enoyl-CoA hydratase
OCU35_RS05350	COG1902	pentaerythritol trinitrate reductase activity
OCU35_RS05355	COG0346	lactoylglutathione lyase activity
OCU35_RS05360	COG0303	'Molybdopterin
OCU35_RS05365	COG0746	molybdenum cofactor guanylyltransferase activity
OCU35_RS05375	COG4662	Binding-protein-dependent transport system inner membrane component
OCU35_RS05385	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OCU35_RS05415	COG3383	formate dehydrogenase (NAD+) activity
OCU35_RS05420	COG0437	4 iron, 4 sulfur cluster binding
OCU35_RS05435	COG0513	Belongs to the DEAD box helicase family
OCU35_RS05445	COG2153	protein acetylation
OCU35_RS05450	COG2358	TRAP transporter, solute receptor (TAXI family
OCU35_RS05470	COG0702	epimerase
OCU35_RS05485	COG0826	peptidase U32
OCU35_RS05505	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
OCU35_RS05505	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OCU35_RS05510	COG3118	belongs to the thioredoxin family
OCU35_RS05515	COG4232	protein-disulfide reductase activity
OCU35_RS05540	COG0789	Transcriptional regulator
OCU35_RS05545	COG2217	Heavy metal translocating P-type atpase
OCU35_RS05565	COG0471	metal ion transport
OCU35_RS05575	COG0747	negative chemotaxis
OCU35_RS05595	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
OCU35_RS05600	COG3639	organic phosphonate transmembrane transporter activity
OCU35_RS05615	COG1272	protein, Hemolysin III
OCU35_RS05625	COG5413	integral membrane protein
OCU35_RS05645	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OCU35_RS05650	COG4628	conserved protein (DUF2132)
OCU35_RS05655	COG1757	Na H antiporter
OCU35_RS05685	COG2195	Cleaves the N-terminal amino acid of tripeptides
OCU35_RS05695	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
OCU35_RS05700	COG0372	Belongs to the citrate synthase family
OCU35_RS05705	COG2079	MmgE PrpD family protein
OCU35_RS05730	COG3104	oligopeptide transport
OCU35_RS05735	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
OCU35_RS05740	COG1454	alcohol dehydrogenase
OCU35_RS05745	COG1737	Transcriptional regulator
OCU35_RS05750	COG0076	glutamate decarboxylase activity
OCU35_RS05760	COG2431	L-lysine efflux transmembrane transporter activity
OCU35_RS05765	COG3070	regulator of competence-specific genes
OCU35_RS05770	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
OCU35_RS05800	COG2165	general secretion pathway protein
OCU35_RS05810	COG0415	Belongs to the DNA photolyase family
OCU35_RS05855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OCU35_RS05855	COG4191	Histidine kinase
OCU35_RS05865	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
OCU35_RS05870	COG0583	DNA-binding transcription factor activity
OCU35_RS05875	COG0604	alcohol dehydrogenase
OCU35_RS05880	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
OCU35_RS05885	COG4988	ABC transporter
OCU35_RS05890	COG0492	ferredoxin-NADP+ reductase activity
OCU35_RS05895	COG2949	membrane
OCU35_RS05915	COG3313	Fe-S protein
OCU35_RS05920	COG4172	Belongs to the ABC transporter superfamily
OCU35_RS05935	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCU35_RS05940	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OCU35_RS05945	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
OCU35_RS05950	COG1061	Type III restriction enzyme res subunit
OCU35_RS05955	COG1187	pseudouridine synthase activity
OCU35_RS05960	COG2814	Major facilitator Superfamily
OCU35_RS05975	COG0702	epimerase
OCU35_RS05980	COG1136	(ABC) transporter
OCU35_RS05995	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
OCU35_RS06000	COG1309	transcriptional regulator
OCU35_RS06005	COG1960	acyl-CoA dehydrogenase activity
OCU35_RS06015	COG1058	Belongs to the CinA family
OCU35_RS06015	COG1546	Belongs to the CinA family
OCU35_RS06025	COG2963	transposase activity
OCU35_RS06045	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OCU35_RS06050	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OCU35_RS06065	COG2989	Protein conserved in bacteria
OCU35_RS06070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OCU35_RS06080	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
OCU35_RS06095	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OCU35_RS06100	COG3097	Belongs to the UPF0267 family
OCU35_RS06110	COG2176	DNA-directed DNA polymerase activity
OCU35_RS06125	COG1448	Aminotransferase
OCU35_RS06130	COG0017	Asparaginyl-tRNA synthetase
OCU35_RS06135	COG0494	nUDIX hydrolase
OCU35_RS06140	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OCU35_RS06155	COG3106	COG3106 Predicted ATPase
OCU35_RS06160	COG3768	UPF0283 membrane protein
OCU35_RS06170	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OCU35_RS06195	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OCU35_RS06195	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OCU35_RS06200	COG0443	Heat shock 70 kDa protein
OCU35_RS06205	COG0443	Heat shock 70 kDa protein
OCU35_RS06240	COG1643	Atp-dependent helicase
OCU35_RS06250	COG0437	4 iron, 4 sulfur cluster binding
OCU35_RS06255	COG3381	protein complex oligomerization
OCU35_RS06260	COG0243	molybdopterin cofactor binding
OCU35_RS06265	COG0437	4 iron, 4 sulfur cluster binding
OCU35_RS06270	COG3302	dmso reductase anchor subunit
OCU35_RS06315	COG0281	malic enzyme
OCU35_RS06320	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
OCU35_RS06325	COG1280	lysine exporter protein (LysE YggA)
OCU35_RS06340	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCU35_RS06345	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
OCU35_RS06355	COG1115	amino acid carrier protein
OCU35_RS06380	COG0561	phosphatase activity
OCU35_RS06390	COG2885	chlorophyll binding
OCU35_RS06405	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OCU35_RS06410	COG1254	Belongs to the acylphosphatase family
OCU35_RS06415	COG2920	part of a sulfur-relay system
OCU35_RS06420	COG0670	Belongs to the BI1 family
OCU35_RS06425	COG1126	abc transporter atp-binding protein
OCU35_RS06430	COG0765	amino acid transport
OCU35_RS06435	COG4597	amino acid ABC transporter
OCU35_RS06440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OCU35_RS06450	COG3118	belongs to the thioredoxin family
OCU35_RS06460	COG1666	GTP binding
OCU35_RS06465	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
OCU35_RS06470	COG0574	Belongs to the PEP-utilizing enzyme family
OCU35_RS06470	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OCU35_RS06485	COG3008	intermembrane lipid transfer
OCU35_RS06490	COG2995	paraquat-inducible protein a
OCU35_RS06495	COG1956	GAF domain-containing protein
OCU35_RS06500	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
OCU35_RS06515	COG0308	aminopeptidase N
OCU35_RS06525	COG0167	dihydroorotate dehydrogenase activity
OCU35_RS06535	COG0116	Belongs to the methyltransferase superfamily
OCU35_RS06535	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OCU35_RS06545	COG0488	(ABC) transporter
OCU35_RS06565	COG1067	ATP-dependent peptidase activity
OCU35_RS06585	COG2807	transmembrane transport
OCU35_RS06595	COG3278	Belongs to the heme-copper respiratory oxidase family
OCU35_RS06610	COG2010	Cytochrome c
OCU35_RS06620	COG2217	Heavy metal translocating P-type atpase
OCU35_RS06635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OCU35_RS06640	COG0589	response to stress
OCU35_RS06650	COG2963	transposase activity
OCU35_RS06675	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OCU35_RS06700	COG1940	carbohydrate kinase activity
OCU35_RS06705	COG3148	PFAM DTW domain containing protein
OCU35_RS06715	COG0791	NLP P60 protein
OCU35_RS06720	COG3001	Fructosamine kinase
OCU35_RS06730	COG0307	riboflavin synthase, alpha
OCU35_RS06740	COG1793	dna ligase
OCU35_RS06770	COG2814	Major facilitator Superfamily
OCU35_RS06785	COG0625	glutathione transferase activity
OCU35_RS06815	COG1228	amidohydrolase
OCU35_RS06860	COG0419	ATPase involved in DNA repair
OCU35_RS06865	COG0420	3'-5' exonuclease activity
OCU35_RS06885	COG0629	single-stranded DNA binding
OCU35_RS06890	COG1322	Protein conserved in bacteria
OCU35_RS06905	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
OCU35_RS06920	COG0673	inositol 2-dehydrogenase activity
OCU35_RS06945	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
OCU35_RS06965	COG1823	symporter activity
OCU35_RS06975	COG2925	Exonuclease
OCU35_RS06985	COG1346	cytolysis
OCU35_RS06990	COG0295	cytidine deaminase activity
OCU35_RS06995	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
OCU35_RS07000	COG0776	regulation of translation
OCU35_RS07025	COG1187	pseudouridine synthase activity
OCU35_RS07040	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OCU35_RS07080	COG4895	conserved protein (DUF2196)
OCU35_RS07085	COG0513	Belongs to the DEAD box helicase family
OCU35_RS07090	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OCU35_RS07090	COG0072	phenylalanine-tRNA ligase activity
OCU35_RS07095	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
OCU35_RS07110	COG2133	pyrroloquinoline quinone binding
OCU35_RS07120	COG2897	thiosulfate sulfurtransferase activity
OCU35_RS07135	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
OCU35_RS07140	COG0291	Belongs to the bacterial ribosomal protein bL35 family
OCU35_RS07150	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OCU35_RS07160	COG0583	DNA-binding transcription factor activity
OCU35_RS07165	COG1486	melibiose metabolic process
OCU35_RS07170	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OCU35_RS07190	COG0678	peroxiredoxin activity
OCU35_RS07205	COG0277	FAD linked oxidase domain protein
OCU35_RS07205	COG0247	lactate metabolic process
OCU35_RS07225	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
OCU35_RS07230	COG3314	Sporulation integral membrane protein YlbJ
OCU35_RS07245	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
OCU35_RS07255	COG3119	arylsulfatase activity
OCU35_RS07265	COG2207	Transcriptional regulator
OCU35_RS07270	COG0561	phosphatase activity
OCU35_RS07275	COG0019	diaminopimelate decarboxylase activity
OCU35_RS07340	COG0322	excinuclease ABC activity
OCU35_RS07345	COG2197	response regulator
OCU35_RS07350	COG0417	DNA replication proofreading
OCU35_RS07365	COG2963	transposase activity
OCU35_RS07405	COG1132	(ABC) transporter
OCU35_RS07415	COG3085	chromosome segregation
OCU35_RS07440	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OCU35_RS07445	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OCU35_RS07450	COG0387	Pfam Sodium calcium exchanger
OCU35_RS07465	COG2239	Acts as a magnesium transporter
OCU35_RS07480	COG0583	DNA-binding transcription factor activity
OCU35_RS07485	COG0668	transmembrane transport
OCU35_RS07500	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OCU35_RS07520	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OCU35_RS07560	COG3118	belongs to the thioredoxin family
OCU35_RS07565	COG1187	pseudouridine synthase activity
OCU35_RS07570	COG0009	L-threonylcarbamoyladenylate synthase
OCU35_RS07575	COG0613	PHP domain protein
OCU35_RS07580	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OCU35_RS07585	COG0512	Glutamine amidotransferase of anthranilate synthase
OCU35_RS07590	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OCU35_RS07595	COG0134	indole-3-glycerol-phosphate synthase activity
OCU35_RS07595	COG0135	phosphoribosylanthranilate isomerase activity
OCU35_RS07605	COG0159	tryptophan synthase activity
OCU35_RS07610	COG1301	dicarboxylic acid transport
OCU35_RS07625	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS07640	COG1063	alcohol dehydrogenase
OCU35_RS07650	COG2917	probably involved in intracellular septation
OCU35_RS07655	COG1607	acyl-coa hydrolase
OCU35_RS07660	COG2350	Protein conserved in bacteria
OCU35_RS07670	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OCU35_RS07675	COG0564	pseudouridine synthase activity
OCU35_RS07685	COG0626	cystathionine gamma-synthase activity
OCU35_RS07695	COG2850	peptidyl-arginine hydroxylation
OCU35_RS07720	COG4628	conserved protein (DUF2132)
OCU35_RS07740	COG0446	pyridine nucleotide-disulphide oxidoreductase
OCU35_RS07755	COG3604	Transcriptional regulator
OCU35_RS07760	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
OCU35_RS07770	COG0519	Catalyzes the synthesis of GMP from XMP
OCU35_RS07790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCU35_RS07830	COG3104	oligopeptide transport
OCU35_RS07850	COG1842	Phage shock protein A
OCU35_RS07855	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OCU35_RS07865	COG4168	peptide transport system, permease
OCU35_RS07880	COG4172	Belongs to the ABC transporter superfamily
OCU35_RS07885	COG1227	inorganic diphosphatase activity
OCU35_RS07890	COG0500	methyltransferase
OCU35_RS07895	COG0189	ligase activity
OCU35_RS07895	COG4067	protein conserved in archaea
OCU35_RS07905	COG0189	ligase activity
OCU35_RS07910	COG3547	Transposase (IS116 IS110 IS902 family)
OCU35_RS07915	COG3547	Transposase (IS116 IS110 IS902 family)
OCU35_RS07920	COG1435	thymidine kinase activity
OCU35_RS07925	COG0215	cysteine-tRNA ligase activity
OCU35_RS07930	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OCU35_RS07935	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OCU35_RS07940	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
OCU35_RS07950	COG2963	transposase activity
OCU35_RS07960	COG0140	phosphoribosyl-ATP diphosphatase activity
OCU35_RS07960	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
OCU35_RS07965	COG0107	imidazoleglycerol-phosphate synthase activity
OCU35_RS07970	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
OCU35_RS07975	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
OCU35_RS07980	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
OCU35_RS07980	COG0131	Imidazoleglycerol-phosphate dehydratase
OCU35_RS07985	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OCU35_RS07990	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OCU35_RS07995	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
OCU35_RS08000	COG1757	Na H antiporter
OCU35_RS08010	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OCU35_RS08015	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OCU35_RS08025	COG2992	FlgJ-related protein
OCU35_RS08030	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
OCU35_RS08035	COG3134	Outer membrane lipoprotein
OCU35_RS08040	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
OCU35_RS08045	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
OCU35_RS08050	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
OCU35_RS08055	COG0542	response to heat
OCU35_RS08060	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
OCU35_RS08065	COG1278	Cold shock
OCU35_RS08090	COG0531	amino acid
OCU35_RS08100	COG1187	pseudouridine synthase activity
OCU35_RS08115	COG2915	High frequency lysogenization protein hflD homolog
OCU35_RS08120	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
OCU35_RS08125	COG0297	glycogen (starch) synthase activity
OCU35_RS08135	COG1199	ATP-dependent helicase activity
OCU35_RS08140	COG0730	response to heat
OCU35_RS08155	COG0708	Exodeoxyribonuclease III
OCU35_RS08165	COG4160	amino acid transport
OCU35_RS08190	COG1882	Formate acetyltransferase
OCU35_RS08200	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
OCU35_RS08205	COG3013	Belongs to the UPF0304 family
OCU35_RS08215	COG2766	serine protein kinase
OCU35_RS08220	COG2718	Belongs to the UPF0229 family
OCU35_RS08225	COG2719	SpoVR family
OCU35_RS08235	COG2835	tetraacyldisaccharide 4'-kinase activity
OCU35_RS08240	COG1663	tetraacyldisaccharide 4'-kinase activity
OCU35_RS08245	COG1132	(ABC) transporter
OCU35_RS08250	COG0658	competence protein
OCU35_RS08250	COG2333	competence protein COMEC
OCU35_RS08260	COG4591	ABC-type transport system involved in lipoprotein release permease component
OCU35_RS08265	COG1136	(ABC) transporter
OCU35_RS08270	COG4591	ABC-type transport system involved in lipoprotein release permease component
OCU35_RS08275	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OCU35_RS08285	COG1252	NADH dehydrogenase
OCU35_RS08290	COG3150	esterase
OCU35_RS08310	COG0537	adenosine 5'-monophosphoramidase activity
OCU35_RS08320	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
OCU35_RS08325	COG0517	IMP dehydrogenase activity
OCU35_RS08325	COG0617	tRNA 3'-terminal CCA addition
OCU35_RS08325	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OCU35_RS08350	COG4771	TonB-dependent receptor
OCU35_RS08360	COG4607	ABC-type enterochelin transport system periplasmic component
OCU35_RS08365	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCU35_RS08370	COG4605	iron ion homeostasis
OCU35_RS08375	COG4604	ABC transporter, ATP-binding protein
OCU35_RS08405	COG0745	RESPONSE REGULATOR receiver
OCU35_RS08410	COG5002	protein histidine kinase activity
OCU35_RS08415	COG2814	Major facilitator Superfamily
OCU35_RS08420	COG0110	maltose O-acetyltransferase activity
OCU35_RS08425	COG0204	Acyl-transferase
OCU35_RS08430	COG0583	DNA-binding transcription factor activity
OCU35_RS08465	COG3046	protein related to deoxyribodipyrimidine photolyase
OCU35_RS08480	COG3383	formate dehydrogenase (NAD+) activity
OCU35_RS08485	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
OCU35_RS08495	COG4948	Mandelate Racemase Muconate Lactonizing
OCU35_RS08500	COG1609	Transcriptional regulator
OCU35_RS08505	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCU35_RS08515	COG1124	(ABC) transporter
OCU35_RS08520	COG0444	Belongs to the ABC transporter superfamily
OCU35_RS08525	COG0534	Mate efflux family protein
OCU35_RS08535	COG1349	DNA-binding transcription factor activity
OCU35_RS08545	COG1653	transport
OCU35_RS08550	COG1175	transmembrane transport
OCU35_RS08555	COG0395	ABC-type sugar transport system, permease component
OCU35_RS08560	COG3842	ATPase activity
OCU35_RS08585	COG0531	amino acid
OCU35_RS08600	COG1609	Transcriptional regulator
OCU35_RS08605	COG0076	glutamate decarboxylase activity
OCU35_RS08610	COG2985	domain, Protein
OCU35_RS08620	COG1346	cytolysis
OCU35_RS08630	COG0583	DNA-binding transcription factor activity
OCU35_RS08650	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OCU35_RS08660	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OCU35_RS08665	COG2860	membrane
OCU35_RS08685	COG0243	molybdopterin cofactor binding
OCU35_RS08690	COG3005	denitrification pathway
OCU35_RS08695	COG0488	(ABC) transporter
OCU35_RS08740	COG0625	glutathione transferase activity
OCU35_RS08745	COG0735	belongs to the Fur family
OCU35_RS08755	COG1609	Transcriptional regulator
OCU35_RS08760	COG2273	Hydrolase Family 16
OCU35_RS08790	COG0589	response to stress
OCU35_RS08795	COG0659	secondary active sulfate transmembrane transporter activity
OCU35_RS08800	COG1228	amidohydrolase
OCU35_RS08805	COG0861	Integral membrane protein TerC family
OCU35_RS08810	COG2814	Major facilitator Superfamily
OCU35_RS08815	COG0739	heme binding
OCU35_RS08825	COG0814	amino acid
OCU35_RS08830	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OCU35_RS08850	COG1566	PFAM secretion protein HlyD family protein
OCU35_RS08875	COG0395	ABC-type sugar transport system, permease component
OCU35_RS08880	COG1175	transmembrane transport
OCU35_RS08890	COG1609	Transcriptional regulator
OCU35_RS08895	COG3459	Glycosyltransferase 36 associated
OCU35_RS08900	COG3842	ATPase activity
OCU35_RS08935	COG2356	endonuclease I
OCU35_RS08970	COG2801	Transposase and inactivated derivatives
OCU35_RS09055	COG3126	Type III secretion system lipoprotein chaperone (YscW)
OCU35_RS09060	COG1946	Acyl-CoA thioesterase
OCU35_RS09065	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS09070	COG1522	sequence-specific DNA binding
OCU35_RS09095	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
OCU35_RS09100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCU35_RS09135	COG0435	Glutathione S-transferase
OCU35_RS09145	COG0444	Belongs to the ABC transporter superfamily
OCU35_RS09150	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCU35_RS09155	COG0601	transmembrane transport
OCU35_RS09165	COG0314	molybdopterin synthase activity
OCU35_RS09170	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
OCU35_RS09175	COG0315	cyclic pyranopterin monophosphate synthase activity
OCU35_RS09180	COG0521	Mo-molybdopterin cofactor biosynthetic process
OCU35_RS09185	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OCU35_RS09190	COG0391	Required for morphogenesis under gluconeogenic growth conditions
OCU35_RS09195	COG2198	Histidine kinase
OCU35_RS09200	COG2204	response regulator
OCU35_RS09205	COG0556	nucleotide-excision repair
OCU35_RS09225	COG4656	Part of a membrane complex involved in electron transport
OCU35_RS09230	COG4658	electron transport chain
OCU35_RS09235	COG4659	FMN binding
OCU35_RS09240	COG4660	Part of a membrane complex involved in electron transport
OCU35_RS09245	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OCU35_RS09250	COG0346	lactoylglutathione lyase activity
OCU35_RS09260	COG2056	Na+-H+ antiporter family
OCU35_RS09265	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
OCU35_RS09275	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS09285	COG1012	belongs to the aldehyde dehydrogenase family
OCU35_RS09285	COG1454	alcohol dehydrogenase
OCU35_RS09290	COG2095	MarC family integral membrane protein
OCU35_RS09295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OCU35_RS09300	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OCU35_RS09305	COG3081	Nucleoid-associated protein
OCU35_RS09310	COG3082	Protein of unknown function (DUF1414)
OCU35_RS09315	COG3083	sulfuric ester hydrolase activity
OCU35_RS09330	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OCU35_RS09340	COG1686	Belongs to the peptidase S11 family
OCU35_RS09345	COG0583	DNA-binding transcription factor activity
OCU35_RS09375	COG0583	DNA-binding transcription factor activity
OCU35_RS09400	COG0583	DNA-binding transcription factor activity
OCU35_RS09415	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
OCU35_RS09420	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OCU35_RS09425	COG0583	DNA-binding transcription factor activity
OCU35_RS09430	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
OCU35_RS09440	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OCU35_RS09445	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
OCU35_RS09475	COG0587	DNA-directed DNA polymerase activity
OCU35_RS09490	COG2186	Transcriptional regulator
OCU35_RS09495	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
OCU35_RS09500	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
OCU35_RS09505	COG0653	protein targeting
OCU35_RS09510	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OCU35_RS09515	COG0366	Alpha amylase catalytic
OCU35_RS09520	COG1122	ATPase activity
OCU35_RS09525	COG4120	Belongs to the binding-protein-dependent transport system permease family
OCU35_RS09540	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OCU35_RS09545	COG0280	phosphate acetyltransferase
OCU35_RS09545	COG0857	belongs to the CobB CobQ family
OCU35_RS09565	COG2855	membrane
OCU35_RS09590	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
OCU35_RS09595	COG1169	isochorismate synthase
OCU35_RS09600	COG0436	Aminotransferase
OCU35_RS09605	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
OCU35_RS09610	COG0232	Belongs to the dGTPase family. Type 2 subfamily
OCU35_RS09630	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OCU35_RS09635	COG0776	regulation of translation
OCU35_RS09640	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
OCU35_RS09645	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
OCU35_RS09655	COG0544	peptidyl-prolyl cis-trans isomerase activity
OCU35_RS09665	COG3437	response regulator, receiver
OCU35_RS09705	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS09715	COG1609	Transcriptional regulator
OCU35_RS09730	COG1085	galactose-1-phosphate uridylyltransferase
OCU35_RS09735	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OCU35_RS09790	COG2840	Smr protein MutS2
OCU35_RS09815	COG0737	Belongs to the 5'-nucleotidase family
OCU35_RS09820	COG2877	3-deoxy-8-phosphooctulonate synthase activity
OCU35_RS09825	COG2912	Transglutaminase-like superfamily
OCU35_RS09835	COG2890	protein-(glutamine-N5) methyltransferase activity
OCU35_RS09840	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
OCU35_RS09845	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
OCU35_RS09850	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
OCU35_RS09855	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
OCU35_RS09860	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
OCU35_RS09865	COG0193	aminoacyl-tRNA hydrolase activity
OCU35_RS09950	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OCU35_RS09960	COG1702	phosphate starvation-inducible protein PhoH
OCU35_RS09965	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
OCU35_RS09970	COG4535	Mg2 and Co2 transporter CorC
OCU35_RS09975	COG0815	Transfers the fatty acyl group on membrane lipoproteins
OCU35_RS09985	COG2888	peptidyl-tyrosine sulfation
OCU35_RS09990	COG0495	leucyl-tRNA aminoacylation
OCU35_RS10000	COG1466	dna polymerase III delta subunit
OCU35_RS10005	COG0799	negative regulation of ribosome biogenesis
OCU35_RS10010	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
OCU35_RS10015	COG0768	penicillin binding
OCU35_RS10020	COG0772	Belongs to the SEDS family
OCU35_RS10025	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
OCU35_RS10030	COG1686	Belongs to the peptidase S11 family
OCU35_RS10035	COG2921	Belongs to the UPF0250 family
OCU35_RS10040	COG0321	lipoyl(octanoyl) transferase activity
OCU35_RS10045	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
OCU35_RS10070	COG1451	nucleotide metabolic process
OCU35_RS10080	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OCU35_RS10085	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
OCU35_RS10090	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OCU35_RS10095	COG2011	ABC-type metal ion transport system permease component
OCU35_RS10100	COG1464	Belongs to the NlpA lipoprotein family
OCU35_RS10115	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
OCU35_RS10120	COG1720	tRNA m6t6A37 methyltransferase activity
OCU35_RS10125	COG0442	prolyl-tRNA aminoacylation
OCU35_RS10140	COG1278	Cold shock
OCU35_RS10150	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OCU35_RS10160	COG2991	Protein conserved in bacteria
OCU35_RS10165	COG1477	protein flavinylation
OCU35_RS10170	COG2871	sodium ion transport
OCU35_RS10175	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
OCU35_RS10190	COG1805	sodium ion transport
OCU35_RS10195	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
OCU35_RS10200	COG0271	Belongs to the BolA IbaG family
OCU35_RS10215	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OCU35_RS10230	COG1595	DNA-templated transcription, initiation
OCU35_RS10245	COG3248	Nucleoside-binding outer membrane protein
OCU35_RS10250	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OCU35_RS10255	COG0693	protein deglycase activity
OCU35_RS10260	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OCU35_RS10265	COG2166	iron-sulfur cluster assembly
OCU35_RS10270	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
OCU35_RS10280	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
OCU35_RS10285	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
OCU35_RS10285	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
OCU35_RS10290	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OCU35_RS10295	COG1074	ATP-dependent DNA helicase activity
OCU35_RS10300	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
OCU35_RS10310	COG0583	DNA-binding transcription factor activity
OCU35_RS10315	COG3141	response to X-ray
OCU35_RS10320	COG2171	N-acyltransferase activity
OCU35_RS10325	COG1301	dicarboxylic acid transport
OCU35_RS10330	COG1609	Transcriptional regulator
OCU35_RS10340	COG0395	ABC-type sugar transport system, permease component
OCU35_RS10345	COG1175	transmembrane transport
OCU35_RS10350	COG2017	converts alpha-aldose to the beta-anomer
OCU35_RS10355	COG0534	Mate efflux family protein
OCU35_RS10370	COG3250	beta-galactosidase activity
OCU35_RS10420	COG4964	Belongs to the GSP D family
OCU35_RS10465	COG0463	Glycosyl transferase, family 2
OCU35_RS10500	COG1022	Amp-dependent synthetase and ligase
OCU35_RS10505	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OCU35_RS10510	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
OCU35_RS10515	COG0560	Phosphoserine phosphatase
OCU35_RS10525	COG0813	purine-nucleoside phosphorylase activity
OCU35_RS10535	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
OCU35_RS10550	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OCU35_RS10555	COG0084	hydrolase, TatD family'
OCU35_RS10560	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
OCU35_RS10565	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OCU35_RS10565	COG1017	nitric oxide dioxygenase activity
OCU35_RS10570	COG1151	hydroxylamine reductase activity
OCU35_RS10585	COG3153	acetyltransferase
OCU35_RS10590	COG3154	lipid carrier protein
OCU35_RS10595	COG0826	peptidase U32
OCU35_RS10600	COG0826	peptidase U32
OCU35_RS10605	COG1609	Transcriptional regulator
OCU35_RS10635	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OCU35_RS10640	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
OCU35_RS10650	COG0195	Participates in both transcription termination and antitermination
OCU35_RS10655	COG0779	Required for maturation of 30S ribosomal subunits
OCU35_RS10670	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OCU35_RS10675	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
OCU35_RS10680	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
OCU35_RS10685	COG0196	riboflavin kinase activity
OCU35_RS10690	COG0728	peptidoglycan biosynthetic process
OCU35_RS10695	COG0268	Binds directly to 16S ribosomal RNA
OCU35_RS10700	COG0640	Transcriptional regulator
OCU35_RS10705	COG0583	DNA-binding transcription factor activity
OCU35_RS10710	COG1283	sodium-dependent phosphate transmembrane transporter activity
OCU35_RS10725	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
OCU35_RS10730	COG0730	response to heat
OCU35_RS10740	COG0494	nUDIX hydrolase
OCU35_RS10745	COG3066	DNA modification
OCU35_RS10755	COG0583	DNA-binding transcription factor activity
OCU35_RS10760	COG0450	alkyl hydroperoxide reductase
OCU35_RS10765	COG3142	Participates in the control of copper homeostasis
OCU35_RS10770	COG0704	Plays a role in the regulation of phosphate uptake
OCU35_RS10775	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
OCU35_RS10780	COG0573	inorganic phosphate transmembrane transporter activity
OCU35_RS10785	COG0573	inorganic phosphate transmembrane transporter activity
OCU35_RS10790	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
OCU35_RS10795	COG0248	Ppx GppA phosphatase
OCU35_RS10805	COG5002	protein histidine kinase activity
OCU35_RS10810	COG0745	RESPONSE REGULATOR receiver
OCU35_RS10815	COG2974	May be involved in recombination
OCU35_RS10820	COG0826	peptidase U32
OCU35_RS10825	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
OCU35_RS10880	COG0542	response to heat
OCU35_RS10885	COG1496	oxidoreductase activity
OCU35_RS10890	COG0564	pseudouridine synthase activity
OCU35_RS10895	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OCU35_RS10900	COG0739	heme binding
OCU35_RS10900	COG1196	nuclear chromosome segregation
OCU35_RS10900	COG0741	lytic transglycosylase activity
OCU35_RS10905	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
OCU35_RS10910	COG1605	Chorismate mutase
OCU35_RS10910	COG0077	Prephenate dehydratase
OCU35_RS10915	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
OCU35_RS10920	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
OCU35_RS10930	COG0488	(ABC) transporter
OCU35_RS10940	COG0287	Prephenate dehydrogenase
OCU35_RS10940	COG1605	Chorismate mutase
OCU35_RS10945	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
OCU35_RS10950	COG3275	phosphorelay sensor kinase activity
OCU35_RS10955	COG3279	Response regulator of the LytR AlgR family
OCU35_RS10970	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
OCU35_RS10980	COG1966	Carbon starvation protein
OCU35_RS10985	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
OCU35_RS10990	COG1047	Peptidyl-prolyl cis-trans
OCU35_RS10995	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OCU35_RS11000	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OCU35_RS11005	COG1862	Preprotein translocase
OCU35_RS11010	COG0343	queuine tRNA-ribosyltransferase activity
OCU35_RS11015	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
OCU35_RS11020	COG0517	IMP dehydrogenase activity
OCU35_RS11025	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
OCU35_RS11035	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OCU35_RS11040	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OCU35_RS11045	COG4974	Belongs to the 'phage' integrase family
OCU35_RS11050	COG0716	FMN binding
OCU35_RS11065	COG0513	Belongs to the DEAD box helicase family
OCU35_RS11075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OCU35_RS11080	COG3022	response to hydroperoxide
OCU35_RS11085	COG1115	amino acid carrier protein
OCU35_RS11100	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
OCU35_RS11105	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
OCU35_RS11115	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
OCU35_RS11120	COG0083	homoserine kinase activity
OCU35_RS11135	COG0745	RESPONSE REGULATOR receiver
OCU35_RS11145	COG0784	Response regulator, receiver
OCU35_RS11145	COG2198	Histidine kinase
OCU35_RS11145	COG5002	protein histidine kinase activity
OCU35_RS11150	COG1242	4 iron, 4 sulfur cluster binding
OCU35_RS11155	COG0070	glutamate synthase
OCU35_RS11155	COG0067	glutamate synthase
OCU35_RS11155	COG0069	glutamate synthase activity
OCU35_RS11165	COG0070	glutamate synthase
OCU35_RS11165	COG0069	glutamate synthase activity
OCU35_RS11165	COG0067	glutamate synthase
OCU35_RS11170	COG0493	'glutamate synthase
OCU35_RS11180	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
OCU35_RS11185	COG2860	membrane
OCU35_RS11195	COG0583	DNA-binding transcription factor activity
OCU35_RS11200	COG0730	response to heat
OCU35_RS11205	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
OCU35_RS11210	COG0505	Belongs to the CarA family
OCU35_RS11220	COG0494	nUDIX hydrolase
OCU35_RS11235	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
OCU35_RS11240	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
OCU35_RS11245	COG0849	cell division
OCU35_RS11250	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
OCU35_RS11260	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
OCU35_RS11265	COG0772	Belongs to the SEDS family
OCU35_RS11270	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
OCU35_RS11275	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OCU35_RS11280	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
OCU35_RS11285	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OCU35_RS11290	COG0768	penicillin binding
OCU35_RS11295	COG3116	cell division
OCU35_RS11310	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
OCU35_RS11315	COG3107	peptidoglycan biosynthetic process
OCU35_RS11320	COG0792	nuclease activity
OCU35_RS11325	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
OCU35_RS11335	COG2969	positive regulation of protein catabolic process
OCU35_RS11340	COG0625	glutathione transferase activity
OCU35_RS11345	COG2857	Cytochrome c1
OCU35_RS11350	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OCU35_RS11355	COG0723	plastoquinol--plastocyanin reductase activity
OCU35_RS11360	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
OCU35_RS11370	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
OCU35_RS11380	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OCU35_RS11390	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OCU35_RS11395	COG0187	DNA topoisomerase II activity
OCU35_RS11400	COG3150	esterase
OCU35_RS11410	COG3151	Protein conserved in bacteria
OCU35_RS11415	COG0494	nUDIX hydrolase
OCU35_RS11420	COG1538	Outer membrane efflux protein
OCU35_RS11435	COG3025	triphosphatase activity
OCU35_RS11440	COG1392	Phosphate transport regulator
OCU35_RS11445	COG0306	phosphate transporter
OCU35_RS11450	COG4991	sh3 domain protein
OCU35_RS11460	COG3409	Peptidoglycan-binding domain 1 protein
OCU35_RS11460	COG3267	Type II secretory pathway component ExeA
OCU35_RS11465	COG0617	tRNA 3'-terminal CCA addition
OCU35_RS11470	COG1968	undecaprenyl-diphosphatase activity
OCU35_RS11475	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OCU35_RS11480	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
OCU35_RS11485	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OCU35_RS11495	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
OCU35_RS11505	COG1610	YqeY-like protein
OCU35_RS11510	COG0358	DNA primase activity
OCU35_RS11540	COG4176	ABC-type proline glycine betaine transport system permease component
OCU35_RS11545	COG4175	Glycine betaine
OCU35_RS11545	COG3448	diguanylate cyclase activity
OCU35_RS11550	COG0583	DNA-binding transcription factor activity
OCU35_RS11555	COG2814	Major facilitator Superfamily
OCU35_RS11560	COG0800	Aldolase
OCU35_RS11570	COG3265	gluconokinase activity
OCU35_RS11575	COG0129	dihydroxy-acid dehydratase activity
OCU35_RS11580	COG1609	Transcriptional regulator
OCU35_RS11585	COG2116	formate transmembrane transporter activity
OCU35_RS11610	COG0534	Mate efflux family protein
OCU35_RS11630	COG2015	COG2015, Alkyl sulfatase and related hydrolases
OCU35_RS11645	COG0673	inositol 2-dehydrogenase activity
OCU35_RS11650	COG0469	pyruvate kinase activity
OCU35_RS11655	COG0440	acetolactate synthase activity
OCU35_RS11660	COG0028	Belongs to the TPP enzyme family
OCU35_RS11665	COG1022	Amp-dependent synthetase and ligase
OCU35_RS11670	COG0583	DNA-binding transcription factor activity
OCU35_RS11705	COG0473	3-isopropylmalate dehydrogenase activity
OCU35_RS11715	COG0066	3-isopropylmalate dehydratase activity
OCU35_RS11730	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
OCU35_RS11735	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
OCU35_RS11745	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
OCU35_RS11750	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
OCU35_RS11755	COG2967	ApaG domain
OCU35_RS11760	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
OCU35_RS11770	COG3610	response to peptide
OCU35_RS11775	COG3610	response to peptide
OCU35_RS11780	COG1289	transmembrane transporter activity
OCU35_RS11795	COG0261	This protein binds to 23S rRNA in the presence of protein L20
OCU35_RS11800	COG0142	geranyltranstransferase activity
OCU35_RS11810	COG0039	L-malate dehydrogenase activity
OCU35_RS11815	COG1438	arginine binding
OCU35_RS11820	COG2358	TRAP transporter, solute receptor (TAXI family
OCU35_RS11830	COG0589	response to stress
OCU35_RS11835	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OCU35_RS11840	COG0564	pseudouridine synthase activity
OCU35_RS11845	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OCU35_RS11850	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
OCU35_RS11855	COG0163	prenyltransferase activity
OCU35_RS11860	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
OCU35_RS11870	COG3040	lipid binding
OCU35_RS11875	COG2105	PFAM AIG2 family protein
OCU35_RS11885	COG0729	surface antigen
OCU35_RS11890	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OCU35_RS11895	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
OCU35_RS11920	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OCU35_RS11920	COG1648	precorrin-2 dehydrogenase activity
OCU35_RS11930	COG3061	Opacity-associated protein A
OCU35_RS11930	COG3266	domain, Protein
OCU35_RS11935	COG0545	Peptidyl-prolyl cis-trans isomerase
OCU35_RS11950	COG0203	ribosomal protein L17
OCU35_RS11955	COG0202	RNA polymerase activity
OCU35_RS11970	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
OCU35_RS11975	COG0257	Belongs to the bacterial ribosomal protein bL36 family
OCU35_RS11980	COG0201	protein transport
OCU35_RS11985	COG0200	Binds to the 23S rRNA
OCU35_RS11990	COG1841	ribosomal large subunit assembly
OCU35_RS12005	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
OCU35_RS12010	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
OCU35_RS12020	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
OCU35_RS12030	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
OCU35_RS12035	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
OCU35_RS12045	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
OCU35_RS12055	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
OCU35_RS12060	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
OCU35_RS12065	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
OCU35_RS12070	COG0089	rRNA binding
OCU35_RS12075	COG0088	Forms part of the polypeptide exit tunnel
OCU35_RS12080	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
OCU35_RS12090	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
OCU35_RS12095	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OCU35_RS12115	COG2923	Belongs to the DsrF TusC family
OCU35_RS12125	COG2964	Protein conserved in bacteria
OCU35_RS12130	COG0545	Peptidyl-prolyl cis-trans isomerase
OCU35_RS12140	COG1446	asparaginase
OCU35_RS12145	COG1047	Peptidyl-prolyl cis-trans
OCU35_RS12160	COG2249	NAD(P)H dehydrogenase (quinone) activity
OCU35_RS12165	COG0488	(ABC) transporter
OCU35_RS12175	COG0429	hydrolase of the alpha beta-hydrolase fold
OCU35_RS12185	COG3954	Phosphoribulokinase
OCU35_RS12200	COG1012	belongs to the aldehyde dehydrogenase family
OCU35_RS12220	COG0180	Tryptophanyl-tRNA synthetase
OCU35_RS12225	COG0546	phosphoglycolate phosphatase activity
OCU35_RS12230	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OCU35_RS12235	COG0338	D12 class N6 adenine-specific DNA methyltransferase
OCU35_RS12275	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
OCU35_RS12280	COG0583	DNA-binding transcription factor activity
OCU35_RS12285	COG0678	peroxiredoxin activity
OCU35_RS12285	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
OCU35_RS12290	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OCU35_RS12295	COG0251	oxidation-reduction process
OCU35_RS12300	COG0165	Argininosuccinate lyase
OCU35_RS12300	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
OCU35_RS12310	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
OCU35_RS12315	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
OCU35_RS12320	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OCU35_RS12325	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
OCU35_RS12330	COG1695	Transcriptional regulator
OCU35_RS12335	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OCU35_RS12340	COG0460	homoserine dehydrogenase
OCU35_RS12340	COG0527	aspartate kinase activity
OCU35_RS12345	COG0626	cystathionine gamma-synthase activity
OCU35_RS12350	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
OCU35_RS12355	COG0281	malic enzyme
OCU35_RS12360	COG0254	rRNA binding
OCU35_RS12365	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OCU35_RS12370	COG1609	Transcriptional regulator
OCU35_RS12380	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
OCU35_RS12385	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
OCU35_RS12395	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
OCU35_RS12405	COG1560	Kdo2-lipid A biosynthetic process
OCU35_RS12420	COG0438	transferase activity, transferring glycosyl groups
OCU35_RS12445	COG1519	Transferase
OCU35_RS12450	COG3642	lipopolysaccharide core region biosynthetic process
OCU35_RS12455	COG0859	PFAM glycosyl transferase family 9
OCU35_RS12460	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
OCU35_RS12470	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
OCU35_RS12475	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OCU35_RS12480	COG0227	Belongs to the bacterial ribosomal protein bL28 family
OCU35_RS12485	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
OCU35_RS12490	COG2183	response to ionizing radiation
OCU35_RS12495	COG0189	ligase activity
OCU35_RS12495	COG4067	protein conserved in archaea
OCU35_RS12500	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
OCU35_RS12515	COG0316	Belongs to the HesB IscA family
OCU35_RS12515	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
OCU35_RS12520	COG1040	competence protein
OCU35_RS12530	COG1218	3'(2'),5'-bisphosphate nucleotidase
OCU35_RS12535	COG0494	nUDIX hydrolase
OCU35_RS12545	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
OCU35_RS12550	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
OCU35_RS12555	COG3156	type II secretion system protein K
OCU35_RS12560	COG4795	General secretion pathway protein
OCU35_RS12565	COG2165	general secretion pathway protein
OCU35_RS12570	COG2165	general secretion pathway protein
OCU35_RS12575	COG2165	general secretion pathway protein
OCU35_RS12580	COG1459	type II secretion system
OCU35_RS12585	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OCU35_RS12595	COG3031	protein transport across the cell outer membrane
OCU35_RS12600	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
OCU35_RS12620	COG0456	acetyltransferase
OCU35_RS12625	COG1490	D-aminoacyl-tRNA deacylase activity
OCU35_RS12635	COG1217	gtp-binding protein TYPA
OCU35_RS12640	COG0174	glutamine synthetase
OCU35_RS12645	COG3852	Histidine kinase
OCU35_RS12680	COG0218	Necessary for normal cell division and for the maintenance of normal septation
OCU35_RS12685	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OCU35_RS12685	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OCU35_RS12700	COG0084	hydrolase, TatD family'
OCU35_RS12705	COG0805	protein transport
OCU35_RS12710	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
OCU35_RS12715	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
OCU35_RS12720	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
OCU35_RS12730	COG2226	methyltransferase
OCU35_RS12745	COG4166	transmembrane transport
OCU35_RS12755	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCU35_RS12760	COG0444	Belongs to the ABC transporter superfamily
OCU35_RS12765	COG4608	Belongs to the ABC transporter superfamily
OCU35_RS12790	COG2081	HI0933 family
OCU35_RS12800	COG1528	Iron-storage protein
OCU35_RS12805	COG0589	response to stress
OCU35_RS12815	COG0742	ribosomal rna small subunit methyltransferase
OCU35_RS12820	COG1522	sequence-specific DNA binding
OCU35_RS12825	COG0339	signal peptide processing
OCU35_RS12830	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
OCU35_RS12835	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OCU35_RS12850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCU35_RS12855	COG0601	transmembrane transport
OCU35_RS12860	COG0747	negative chemotaxis
OCU35_RS12900	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OCU35_RS12905	COG0640	Transcriptional regulator
OCU35_RS12910	COG1280	lysine exporter protein (LysE YggA)
OCU35_RS12915	COG2267	carboxylic ester hydrolase activity
OCU35_RS12920	COG0561	phosphatase activity
OCU35_RS12930	COG3148	PFAM DTW domain containing protein
OCU35_RS12935	COG1011	Hydrolase
OCU35_RS12940	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
OCU35_RS12950	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
OCU35_RS12955	COG0019	diaminopimelate decarboxylase activity
OCU35_RS12965	COG1965	Belongs to the frataxin family
OCU35_RS12985	COG2959	enzyme of heme biosynthesis
OCU35_RS12990	COG3071	HemY protein
OCU35_RS13000	COG2801	Transposase and inactivated derivatives
OCU35_RS13005	COG3547	Transposase (IS116 IS110 IS902 family)
OCU35_RS13045	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
OCU35_RS13055	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
OCU35_RS13060	COG0408	coproporphyrinogen oxidase activity
OCU35_RS13065	COG0009	L-threonylcarbamoyladenylate synthase
OCU35_RS13070	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
OCU35_RS13075	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
OCU35_RS13080	COG0551	DNA topoisomerase type I activity
OCU35_RS13085	COG2922	Belongs to the Smg family
OCU35_RS13090	COG0758	DNA mediated transformation
OCU35_RS13095	COG0242	peptide deformylase activity
OCU35_RS13105	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OCU35_RS13105	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OCU35_RS13110	COG0569	domain protein
OCU35_RS13115	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OCU35_RS13120	COG4326	sporulation control protein
OCU35_RS13125	COG3084	Protein conserved in bacteria
OCU35_RS13135	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OCU35_RS13140	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OCU35_RS13150	COG0606	chelatase, subunit chli
OCU35_RS13160	COG3978	acetolactate synthase activity
OCU35_RS13165	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OCU35_RS13170	COG0129	dihydroxy-acid dehydratase activity
OCU35_RS13180	COG0583	DNA-binding transcription factor activity
OCU35_RS13185	COG2814	Major facilitator Superfamily
OCU35_RS13195	COG0765	amino acid transport
OCU35_RS13205	COG0355	proton-transporting ATP synthase activity, rotational mechanism
OCU35_RS13215	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
OCU35_RS13220	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
OCU35_RS13230	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
OCU35_RS13245	COG3312	ion transport
OCU35_RS13250	COG1475	DNA binding
OCU35_RS13255	COG1192	Involved in chromosome partitioning
OCU35_RS13260	COG0357	Ribosomal RNA small subunit methyltransferase G
OCU35_RS13265	COG0445	tRNA wobble uridine modification
OCU35_RS13270	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
OCU35_RS13275	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
OCU35_RS13280	COG0706	membrane insertase activity
OCU35_RS13285	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
OCU35_RS13295	COG0230	Belongs to the bacterial ribosomal protein bL34 family
OCU35_RS13300	COG1126	abc transporter atp-binding protein
OCU35_RS13320	COG1136	(ABC) transporter
OCU35_RS13330	COG0348	domain, Protein
OCU35_RS13335	COG0437	4 iron, 4 sulfur cluster binding
OCU35_RS13340	COG1609	Transcriptional regulator
OCU35_RS13360	COG0601	transmembrane transport
OCU35_RS13365	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OCU35_RS13370	COG0444	Belongs to the ABC transporter superfamily
OCU35_RS13375	COG4608	Belongs to the ABC transporter superfamily
OCU35_RS13380	COG1472	Belongs to the glycosyl hydrolase 3 family
OCU35_RS13415	COG2176	DNA-directed DNA polymerase activity
OCU35_RS13420	COG0569	domain protein
OCU35_RS13425	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OCU35_RS13430	COG1609	Transcriptional regulator
OCU35_RS13435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OCU35_RS13440	COG1879	ABC-type sugar transport system periplasmic component
OCU35_RS13445	COG1172	Belongs to the binding-protein-dependent transport system permease family
OCU35_RS13450	COG1129	ABC transporter
OCU35_RS13455	COG1869	D-ribose catabolic process
OCU35_RS13460	COG0583	DNA-binding transcription factor activity
OCU35_RS13495	COG2824	Alkylphosphonate utilization operon protein PhnA
OCU35_RS13515	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
OCU35_RS13520	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
OCU35_RS13530	COG2985	domain, Protein
OCU35_RS13540	COG0589	response to stress
OCU35_RS13545	COG0583	DNA-binding transcription factor activity
OCU35_RS13585	COG0252	asparaginase activity
OCU35_RS13590	COG1335	isochorismatase
OCU35_RS13605	COG0189	ligase activity
OCU35_RS13605	COG4067	protein conserved in archaea
OCU35_RS13615	COG0189	ligase activity
OCU35_RS13640	COG2964	Protein conserved in bacteria
OCU35_RS13650	COG1823	symporter activity
OCU35_RS13655	COG0446	pyridine nucleotide-disulphide oxidoreductase
OCU35_RS13660	COG1438	arginine binding
OCU35_RS13685	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
OCU35_RS13695	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
OCU35_RS13705	COG0355	proton-transporting ATP synthase activity, rotational mechanism
OCU35_RS13765	COG0564	pseudouridine synthase activity
OCU35_RS13790	COG2944	sequence-specific DNA binding
OCU35_RS13795	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
OCU35_RS13800	COG0583	DNA-binding transcription factor activity
OCU35_RS13805	COG2190	(PTS) system
OCU35_RS13805	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OCU35_RS13805	COG1263	PTS System
OCU35_RS13815	COG1764	response to oxidative stress
OCU35_RS13820	COG1846	Transcriptional regulator
OCU35_RS13825	COG0513	Belongs to the DEAD box helicase family
OCU35_RS13840	COG2738	Putative neutral zinc metallopeptidase
OCU35_RS13870	COG0583	DNA-binding transcription factor activity
OCU35_RS13895	COG1280	lysine exporter protein (LysE YggA)
OCU35_RS13900	COG1522	sequence-specific DNA binding
OCU35_RS13910	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
OCU35_RS13920	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OCU35_RS13950	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS13965	COG2207	Transcriptional regulator
OCU35_RS13970	COG2211	Major facilitator Superfamily
OCU35_RS13975	COG3459	Glycosyltransferase 36 associated
OCU35_RS14020	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OCU35_RS14025	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OCU35_RS14030	COG4214	carbohydrate transport
OCU35_RS14035	COG1129	ABC transporter
OCU35_RS14040	COG4213	ABC transporter substrate-binding protein
OCU35_RS14045	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OCU35_RS14060	COG0583	DNA-binding transcription factor activity
OCU35_RS14070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OCU35_RS14075	COG0174	glutamine synthetase
OCU35_RS14080	COG0174	glutamine synthetase
OCU35_RS14090	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
OCU35_RS14095	COG3842	ATPase activity
OCU35_RS14100	COG1176	ABC-type spermidine putrescine transport system, permease component I
OCU35_RS14105	COG1177	transmembrane transport
OCU35_RS14120	COG1012	belongs to the aldehyde dehydrogenase family
OCU35_RS14130	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OCU35_RS14140	COG0519	Catalyzes the synthesis of GMP from XMP
OCU35_RS14150	COG2015	COG2015, Alkyl sulfatase and related hydrolases
OCU35_RS14165	COG2211	Major facilitator Superfamily
OCU35_RS14185	COG2759	Belongs to the formate--tetrahydrofolate ligase family
OCU35_RS14190	COG1166	arginine decarboxylase activity
OCU35_RS14195	COG0010	Belongs to the arginase family
OCU35_RS14200	COG1760	l-serine dehydratase
OCU35_RS14210	COG2814	Major facilitator Superfamily
OCU35_RS14225	COG1609	Transcriptional regulator
OCU35_RS14230	COG2816	NAD+ diphosphatase activity
OCU35_RS14240	COG0765	amino acid transport
OCU35_RS14245	COG0765	amino acid transport
OCU35_RS14250	COG1126	abc transporter atp-binding protein
OCU35_RS14255	COG1737	Transcriptional regulator
OCU35_RS14275	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OCU35_RS14330	COG1840	ABC-type Fe3 transport system, periplasmic component
OCU35_RS14335	COG2814	Major facilitator Superfamily
OCU35_RS14345	COG3842	ATPase activity
OCU35_RS14360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OCU35_RS14375	COG1132	(ABC) transporter
OCU35_RS14380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCU35_RS14460	COG0529	Catalyzes the synthesis of activated sulfate
OCU35_RS14465	COG0471	metal ion transport
OCU35_RS14465	COG3273	potassium ion transport
OCU35_RS14470	COG2895	sulfate adenylyltransferase (ATP) activity
OCU35_RS14480	COG0175	sulfate reduction
OCU35_RS14485	COG1596	polysaccharide export
OCU35_RS14495	COG0489	protein tyrosine kinase activity
OCU35_RS14495	COG3206	protein involved in exopolysaccharide biosynthesis
OCU35_RS14505	COG1088	dTDP-glucose 4,6-dehydratase activity
OCU35_RS14555	COG0438	transferase activity, transferring glycosyl groups
OCU35_RS14560	COG0438	transferase activity, transferring glycosyl groups
OCU35_RS14565	COG1086	Polysaccharide biosynthesis protein
OCU35_RS14610	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OCU35_RS14625	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS14630	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
OCU35_RS14650	COG0438	transferase activity, transferring glycosyl groups
OCU35_RS14670	COG0438	transferase activity, transferring glycosyl groups
OCU35_RS14675	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OCU35_RS14680	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OCU35_RS14690	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OCU35_RS14695	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OCU35_RS14705	COG2909	trisaccharide binding
OCU35_RS14720	COG0058	SHG alpha-glucan phosphorylase activity
OCU35_RS14725	COG1640	4-alpha-glucanotransferase
OCU35_RS14730	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OCU35_RS14775	COG2264	protein methyltransferase activity
OCU35_RS14785	COG0720	synthase
OCU35_RS14790	COG0602	queuosine metabolic process
OCU35_RS14805	COG0366	Alpha amylase catalytic
OCU35_RS14810	COG1162	GTPase activity
OCU35_RS14835	COG2195	Cleaves the N-terminal amino acid of tripeptides
OCU35_RS14840	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OCU35_RS14860	COG1566	PFAM secretion protein HlyD family protein
OCU35_RS14880	COG3272	Protein of unknown function (DUF1722)
OCU35_RS14885	COG0415	Belongs to the DNA photolyase family
OCU35_RS14890	COG1376	ErfK ybiS ycfS ynhG family protein
OCU35_RS14890	COG1388	LysM domain
OCU35_RS14910	COG0573	inorganic phosphate transmembrane transporter activity
OCU35_RS14915	COG0581	inorganic phosphate transmembrane transporter activity
OCU35_RS14920	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
OCU35_RS14955	COG3842	ATPase activity
OCU35_RS14965	COG1175	transmembrane transport
OCU35_RS14970	COG3833	ABC-type maltose transport systems, permease component
OCU35_RS14975	COG0668	transmembrane transport
OCU35_RS14990	COG0739	heme binding
OCU35_RS15010	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
OCU35_RS15025	COG1136	(ABC) transporter
OCU35_RS15025	COG0577	efflux transmembrane transporter activity
OCU35_RS15030	COG1136	(ABC) transporter
OCU35_RS15030	COG0577	efflux transmembrane transporter activity
OCU35_RS15040	COG0513	Belongs to the DEAD box helicase family
OCU35_RS15070	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
OCU35_RS15070	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OCU35_RS15070	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OCU35_RS15075	COG1105	Belongs to the carbohydrate kinase PfkB family
OCU35_RS15080	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCU35_RS15080	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCU35_RS15085	COG1609	Transcriptional regulator
OCU35_RS15100	COG0583	DNA-binding transcription factor activity
OCU35_RS15105	COG1063	alcohol dehydrogenase
OCU35_RS15120	COG3250	beta-galactosidase activity
OCU35_RS15145	COG1067	ATP-dependent peptidase activity
OCU35_RS15160	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OCU35_RS15170	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
OCU35_RS15175	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
OCU35_RS15180	COG0418	dihydroorotase activity
OCU35_RS15195	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
OCU35_RS15225	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OCU35_RS15235	COG0531	amino acid
OCU35_RS15240	COG0628	permease
OCU35_RS15250	COG4681	YaeQ
OCU35_RS15255	COG1278	Cold shock
OCU35_RS15260	COG1765	OsmC-like protein
OCU35_RS15275	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OCU35_RS15280	COG0393	Putative heavy-metal-binding
OCU35_RS15300	COG2723	6-phospho-beta-galactosidase activity
OCU35_RS15310	COG0156	8-amino-7-oxononanoate synthase activity
OCU35_RS15315	COG1063	alcohol dehydrogenase
OCU35_RS15325	COG3813	Protein conserved in bacteria
OCU35_RS15340	COG0745	RESPONSE REGULATOR receiver
OCU35_RS15345	COG2205	protein histidine kinase activity
OCU35_RS15350	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OCU35_RS15350	COG2111	Na H antiporter
OCU35_RS15355	COG1006	Multisubunit Na H antiporter MnhC subunit
OCU35_RS15360	COG0651	ATP synthesis coupled electron transport
OCU35_RS15365	COG1863	multisubunit Na H antiporter MnhE subunit
OCU35_RS15370	COG2212	antiporter activity
OCU35_RS15375	COG1320	monovalent cation:proton antiporter activity
OCU35_RS15380	COG0589	response to stress
OCU35_RS15390	COG3530	Putative quorum-sensing-regulated virulence factor
OCU35_RS15395	COG0625	glutathione transferase activity
OCU35_RS15400	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OCU35_RS15405	COG0363	glucosamine-6-phosphate deaminase activity
OCU35_RS15410	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
OCU35_RS15420	COG0488	(ABC) transporter
OCU35_RS15425	COG0786	glutamate:sodium symporter activity
OCU35_RS15445	COG3038	cytochrome b561
OCU35_RS15450	COG2353	YceI-like domain
OCU35_RS15460	COG3593	DNA synthesis involved in DNA repair
OCU35_RS15465	COG0737	Belongs to the 5'-nucleotidase family
OCU35_RS15485	COG1760	l-serine dehydratase
OCU35_RS15490	COG0814	amino acid
OCU35_RS15495	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
OCU35_RS15505	COG0583	DNA-binding transcription factor activity
OCU35_RS15520	COG0446	pyridine nucleotide-disulphide oxidoreductase
OCU35_RS15520	COG1902	pentaerythritol trinitrate reductase activity
OCU35_RS15535	COG1597	lipid kinase activity
OCU35_RS15555	COG0330	HflC and HflK could
OCU35_RS15565	COG3263	regulation of cellular component size
OCU35_RS15570	COG2824	Alkylphosphonate utilization operon protein PhnA
OCU35_RS15580	COG2050	protein possibly involved in aromatic compounds catabolism
OCU35_RS15590	COG4533	DNA binding
OCU35_RS15615	COG1566	PFAM secretion protein HlyD family protein
OCU35_RS15630	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
OCU35_RS15635	COG4172	Belongs to the ABC transporter superfamily
OCU35_RS15645	COG4239	(ABC) transporter, permease
OCU35_RS15650	COG4174	ABC transporter (Permease)
OCU35_RS15655	COG4166	transmembrane transport
OCU35_RS15670	COG0513	Belongs to the DEAD box helicase family
OCU35_RS15675	COG0123	including yeast histone deacetylase and acetoin utilization protein
OCU35_RS15680	COG0671	phosphoesterase, PA-phosphatase related
OCU35_RS15695	COG0534	Mate efflux family protein
OCU35_RS15710	COG0513	Belongs to the DEAD box helicase family
OCU35_RS15715	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
OCU35_RS15720	COG0494	nUDIX hydrolase
OCU35_RS15725	COG0714	Associated with various cellular activities
OCU35_RS15740	COG5001	Diguanylate cyclase
OCU35_RS15740	COG3300	MHYT domain
OCU35_RS15745	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
OCU35_RS15755	COG4181	ATPase activity
OCU35_RS15760	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
OCU35_RS15765	COG1984	allophanate hydrolase subunit 2
OCU35_RS15770	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
OCU35_RS15785	COG0583	DNA-binding transcription factor activity
OCU35_RS15790	COG0045	succinate-CoA ligase (ADP-forming) activity
OCU35_RS15790	COG1042	CoA-binding domain protein
OCU35_RS15790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OCU35_RS15810	COG0023	Translation Initiation Factor
OCU35_RS15815	COG2252	PERMEase
OCU35_RS15820	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OCU35_RS15825	COG0583	DNA-binding transcription factor activity
OCU35_RS15830	COG1741	Belongs to the pirin family
OCU35_RS15845	COG3140	Belongs to the UPF0181 family
OCU35_RS15855	COG0745	RESPONSE REGULATOR receiver
OCU35_RS15865	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
OCU35_RS15870	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
OCU35_RS15890	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
OCU35_RS15895	COG4149	molybdate abc transporter
OCU35_RS15900	COG0725	ABC transporter, periplasmic molybdate-binding protein
OCU35_RS15905	COG4067	protein conserved in archaea
OCU35_RS15905	COG0189	ligase activity
OCU35_RS15915	COG0602	queuosine metabolic process
OCU35_RS15920	COG1328	CTP reductase activity
OCU35_RS15950	COG1472	Belongs to the glycosyl hydrolase 3 family
OCU35_RS15965	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OCU35_RS15980	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
OCU35_RS15990	COG0546	phosphoglycolate phosphatase activity
OCU35_RS16005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OCU35_RS16015	COG0545	Peptidyl-prolyl cis-trans isomerase
OCU35_RS16020	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OCU35_RS16040	COG2205	protein histidine kinase activity
OCU35_RS16040	COG0784	Response regulator, receiver
OCU35_RS16070	COG2204	response regulator
OCU35_RS16080	COG2165	general secretion pathway protein
OCU35_RS16110	COG0110	maltose O-acetyltransferase activity
OCU35_RS16135	COG0346	lactoylglutathione lyase activity
OCU35_RS16145	COG2866	Carboxypeptidase
OCU35_RS16180	COG0523	cobalamin synthesis protein
OCU35_RS16190	COG1396	sequence-specific DNA binding
OCU35_RS16195	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
OCU35_RS16220	COG0583	DNA-binding transcription factor activity
OCU35_RS16230	COG2814	Major facilitator Superfamily
OCU35_RS16265	COG1309	transcriptional regulator
OCU35_RS16270	COG1757	Na H antiporter
OCU35_RS16285	COG0714	Associated with various cellular activities
OCU35_RS16325	COG0438	transferase activity, transferring glycosyl groups
OCU35_RS16335	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OCU35_RS16370	COG2116	formate transmembrane transporter activity
OCU35_RS16380	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OCU35_RS16385	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
OCU35_RS16395	COG1280	lysine exporter protein (LysE YggA)
OCU35_RS16400	COG0583	DNA-binding transcription factor activity
OCU35_RS16410	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
OCU35_RS16425	COG0653	protein targeting
OCU35_RS16430	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OCU35_RS16435	COG0513	Belongs to the DEAD box helicase family
OCU35_RS16450	COG1979	alcohol dehydrogenase
OCU35_RS16460	COG2501	S4 domain
OCU35_RS16490	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
OCU35_RS16510	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
OCU35_RS16515	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OCU35_RS16520	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OCU35_RS16525	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OCU35_RS16530	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OCU35_RS16535	COG1116	anion transmembrane transporter activity
OCU35_RS16555	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OCU35_RS16610	COG0656	L-ascorbic acid biosynthetic process
OCU35_RS16645	COG3437	response regulator, receiver
OCU35_RS16650	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS16675	COG1051	belongs to the nudix hydrolase family
OCU35_RS16700	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS16705	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS16710	COG3394	polysaccharide catabolic process
OCU35_RS16760	COG2176	DNA-directed DNA polymerase activity
OCU35_RS16765	COG0517	IMP dehydrogenase activity
OCU35_RS16770	COG2186	Transcriptional regulator
OCU35_RS16775	COG2186	Transcriptional regulator
OCU35_RS16785	COG0583	DNA-binding transcription factor activity
OCU35_RS16795	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OCU35_RS16810	COG1917	Cupin 2, conserved barrel domain protein
OCU35_RS16815	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OCU35_RS16820	COG0800	Aldolase
OCU35_RS16835	COG0004	ammonium transporteR
OCU35_RS16850	COG2272	Belongs to the type-B carboxylesterase lipase family
OCU35_RS16855	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OCU35_RS16870	COG3214	Protein conserved in bacteria
OCU35_RS16880	COG0729	surface antigen
OCU35_RS16890	COG0583	DNA-binding transcription factor activity
OCU35_RS16895	COG1126	abc transporter atp-binding protein
OCU35_RS16900	COG0765	amino acid transport
OCU35_RS16910	COG0765	amino acid transport
OCU35_RS16915	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
OCU35_RS16925	COG3290	protein histidine kinase activity
OCU35_RS16930	COG4565	transcriptional regulatory protein
OCU35_RS16950	COG1573	uracil-dna glycosylase
OCU35_RS16970	COG0514	ATP-dependent DNA helicase (RecQ)
OCU35_RS17040	COG5433	transposase activity
OCU35_RS17080	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
OCU35_RS17085	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OCU35_RS17115	COG4953	penicillin-binding protein 1C
OCU35_RS17120	COG2373	Large extracellular alpha-helical protein
OCU35_RS17140	COG0514	ATP-dependent DNA helicase (RecQ)
OCU35_RS17160	COG0514	ATP-dependent DNA helicase (RecQ)
OCU35_RS17165	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OCU35_RS17180	COG0602	queuosine metabolic process
OCU35_RS17215	COG0720	synthase
OCU35_RS17245	COG4974	Belongs to the 'phage' integrase family
OCU35_RS17250	COG0516	GMP reductase activity
OCU35_RS17255	COG0405	Gamma-glutamyltransferase
OCU35_RS17260	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
OCU35_RS17260	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
OCU35_RS17295	COG0583	DNA-binding transcription factor activity
OCU35_RS17305	COG4221	oxidoreductase activity
OCU35_RS17310	COG2814	Major facilitator Superfamily
OCU35_RS17325	COG0641	radical SAM
OCU35_RS17340	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
OCU35_RS17350	COG0583	DNA-binding transcription factor activity
OCU35_RS17380	COG0714	Associated with various cellular activities
OCU35_RS17390	COG3119	arylsulfatase activity
OCU35_RS17395	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OCU35_RS17400	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCU35_RS17405	COG3119	arylsulfatase activity
OCU35_RS17410	COG0346	lactoylglutathione lyase activity
OCU35_RS17420	COG4235	cytochrome complex assembly
OCU35_RS17420	COG3088	subunit of a heme lyase
OCU35_RS17425	COG1138	Cytochrome C-type biogenesis protein
OCU35_RS17430	COG3301	Polysulphide reductase, NrfD
OCU35_RS17435	COG0437	4 iron, 4 sulfur cluster binding
OCU35_RS17445	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
OCU35_RS17455	COG0531	amino acid
OCU35_RS17460	COG1584	GPR1 FUN34 yaaH family protein
OCU35_RS17485	COG0513	Belongs to the DEAD box helicase family
OCU35_RS17495	COG1917	Cupin 2, conserved barrel domain protein
OCU35_RS17495	COG4977	sequence-specific DNA binding
OCU35_RS17500	COG4221	oxidoreductase activity
OCU35_RS17515	COG0583	DNA-binding transcription factor activity
OCU35_RS17535	COG0583	DNA-binding transcription factor activity
OCU35_RS17540	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
OCU35_RS17555	COG0523	cobalamin synthesis protein
OCU35_RS17580	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OCU35_RS17585	COG3360	Dodecin
OCU35_RS17590	COG2197	response regulator
OCU35_RS17595	COG3850	Histidine kinase
OCU35_RS17600	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
OCU35_RS17600	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
OCU35_RS17605	COG3062	negative regulation of establishment of protein localization
OCU35_RS17610	COG0243	molybdopterin cofactor binding
OCU35_RS17620	COG3005	denitrification pathway
OCU35_RS17650	COG1132	(ABC) transporter
OCU35_RS17655	COG4771	TonB-dependent receptor
OCU35_RS17660	COG0748	coenzyme F420 binding
OCU35_RS17665	COG3721	Heme iron utilization protein
OCU35_RS17675	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
OCU35_RS17680	COG0811	peptide transport
OCU35_RS17685	COG0848	biopolymer transport protein
OCU35_RS17695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OCU35_RS17700	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
OCU35_RS17730	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
OCU35_RS17735	COG1803	Methylglyoxal synthase
OCU35_RS17755	COG0210	DNA helicase
OCU35_RS17760	COG1289	transmembrane transporter activity
OCU35_RS17765	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
OCU35_RS17770	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
OCU35_RS17775	COG1566	PFAM secretion protein HlyD family protein
OCU35_RS17780	COG2814	Major facilitator Superfamily
OCU35_RS17785	COG0300	oxidoreductase activity
OCU35_RS17795	COG0784	Response regulator, receiver
OCU35_RS17795	COG2205	protein histidine kinase activity
OCU35_RS17810	COG3132	Protein of unknown function, DUF480
OCU35_RS17815	COG2926	Belongs to the UPF0265 family
OCU35_RS17830	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
OCU35_RS17835	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
OCU35_RS17840	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
OCU35_RS17870	COG2963	transposase activity
OCU35_RS17895	COG0583	DNA-binding transcription factor activity
OCU35_RS17900	COG0583	DNA-binding transcription factor activity
OCU35_RS17905	COG1620	l-lactate permease
OCU35_RS17910	COG1304	FMN binding
OCU35_RS17915	COG0277	FAD linked oxidase domain protein
OCU35_RS17925	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCU35_RS17935	COG4989	oxidoreductase activity
OCU35_RS17945	COG0366	Alpha amylase catalytic
OCU35_RS17970	COG1288	antiporter activity
OCU35_RS17975	COG2252	PERMEase
OCU35_RS18000	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OCU35_RS18025	COG3842	ATPase activity
OCU35_RS18035	COG1177	transmembrane transport
OCU35_RS18040	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
OCU35_RS18070	COG0848	biopolymer transport protein
OCU35_RS18075	COG0811	peptide transport
OCU35_RS18080	COG0811	peptide transport
OCU35_RS18090	COG0443	Heat shock 70 kDa protein
OCU35_RS18100	COG0583	DNA-binding transcription factor activity
OCU35_RS18110	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
OCU35_RS18130	COG1278	Cold shock
OCU35_RS18145	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
OCU35_RS18150	COG0366	Alpha amylase catalytic
OCU35_RS18165	COG0179	Fumarylacetoacetate (FAA) hydrolase
OCU35_RS18185	COG0509	glycine decarboxylation via glycine cleavage system
OCU35_RS18235	COG1115	amino acid carrier protein
OCU35_RS18255	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OCU35_RS18285	COG2815	serine threonine protein kinase
OCU35_RS18285	COG0515	serine threonine protein kinase
OCU35_RS18290	COG2223	nitrite transmembrane transporter activity
OCU35_RS18300	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OCU35_RS18310	COG0243	molybdopterin cofactor binding
OCU35_RS18320	COG3278	Belongs to the heme-copper respiratory oxidase family
OCU35_RS18335	COG2814	Major facilitator Superfamily
OCU35_RS18365	COG0402	S-adenosylhomocysteine deaminase activity
OCU35_RS18370	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
OCU35_RS18380	COG0583	DNA-binding transcription factor activity
OCU35_RS18385	COG4989	oxidoreductase activity
OCU35_RS18415	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OCU35_RS18420	COG1012	belongs to the aldehyde dehydrogenase family
OCU35_RS18425	COG2957	Belongs to the agmatine deiminase family
OCU35_RS18435	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OCU35_RS18440	COG1012	belongs to the aldehyde dehydrogenase family
OCU35_RS18445	COG1396	sequence-specific DNA binding
OCU35_RS18445	COG1917	Cupin 2, conserved barrel domain protein
OCU35_RS18450	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
OCU35_RS18455	COG0174	glutamine synthetase
OCU35_RS18460	COG1757	Na H antiporter
OCU35_RS18470	COG0714	Associated with various cellular activities
OCU35_RS18485	COG2304	oxidoreductase activity
OCU35_RS18500	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OCU35_RS18505	COG2213	PTS system mannitol-specific
OCU35_RS18510	COG1063	alcohol dehydrogenase
OCU35_RS18520	COG1072	(Pantothenic acid kinase))
OCU35_RS18525	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OCU35_RS18530	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
OCU35_RS18555	COG1595	DNA-templated transcription, initiation
OCU35_RS18570	COG1472	Belongs to the glycosyl hydrolase 3 family
OCU35_RS18595	COG2801	Transposase and inactivated derivatives
OCU35_RS18610	COG0583	DNA-binding transcription factor activity
OCU35_RS18615	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OCU35_RS18630	COG1418	mRNA catabolic process
OCU35_RS18655	COG1410	methionine synthase
OCU35_RS18655	COG0646	methionine synthase
OCU35_RS18660	COG0069	glutamate synthase activity
OCU35_RS18670	COG0583	DNA-binding transcription factor activity
OCU35_RS18680	COG1024	Enoyl-CoA hydratase
OCU35_RS18690	COG0753	catalase activity
OCU35_RS18695	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
OCU35_RS18730	COG1454	alcohol dehydrogenase
OCU35_RS18735	COG2130	NADP-dependent
OCU35_RS18745	COG1028	Short-chain dehydrogenase reductase Sdr
OCU35_RS18750	COG1785	Belongs to the alkaline phosphatase family
OCU35_RS18760	COG0109	protoheme IX farnesyltransferase activity
OCU35_RS18765	COG1612	heme a metabolic process
OCU35_RS18785	COG1845	cytochrome c oxidase, subunit III
OCU35_RS18790	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
OCU35_RS18795	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
OCU35_RS18800	COG1565	acr, cog1565
OCU35_RS18800	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OCU35_RS18805	COG0668	transmembrane transport
OCU35_RS18815	COG3314	Sporulation integral membrane protein YlbJ
OCU35_RS18820	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OCU35_RS18820	COG2169	Transcriptional regulator
OCU35_RS18845	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OCU35_RS18870	COG1523	belongs to the glycosyl hydrolase 13 family
OCU35_RS18880	COG4580	involved in the transport of maltose and maltodextrins
OCU35_RS18895	COG1132	(ABC) transporter
OCU35_RS18900	COG0519	Catalyzes the synthesis of GMP from XMP
OCU35_RS18900	COG0518	GMP synthase (glutamine-hydrolyzing) activity
OCU35_RS18910	COG3724	N-succinylarginine dihydrolase activity
OCU35_RS18920	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
OCU35_RS18925	COG1309	transcriptional regulator
OCU35_RS18935	COG0583	DNA-binding transcription factor activity
OCU35_RS18940	COG2814	Major facilitator Superfamily
OCU35_RS18945	COG5001	Diguanylate cyclase
OCU35_RS18945	COG4251	negative regulation of phosphorylation
OCU35_RS18945	COG3706	GGDEF domain
OCU35_RS18945	COG2203	Gaf domain
OCU35_RS18950	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OCU35_RS18955	COG3386	PFAM SMP-30 Gluconolaconase
OCU35_RS18990	COG0668	transmembrane transport
OCU35_RS18995	COG0390	transport system, permease component
OCU35_RS19000	COG4667	esterase of the alpha-beta hydrolase superfamily
OCU35_RS19015	COG4206	TonB-dependent receptor
OCU35_RS19030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OCU35_RS19045	COG2274	protein secretion by the type I secretion system
OCU35_RS19050	COG1444	tRNA N-acetyltransferase activity
OCU35_RS19055	COG0668	transmembrane transport
OCU35_RS19085	COG3174	membrane
OCU35_RS19105	COG2084	Dehydrogenase
OCU35_RS19115	COG0739	heme binding
OCU35_RS19155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family