A6E01_RS00005	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6E01_RS00010	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS00010	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6E01_RS00020	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00050	SM01228	A6E01_RS00050
A6E01_RS00065	SM00470	ParB-like nuclease domain
A6E01_RS00105	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00125	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS00165	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00170	SM00563	Phosphate acyltransferases
A6E01_RS00245	SM01001	AIR carboxylase
A6E01_RS00340	SM01219	A6E01_RS00340
A6E01_RS00370	SM01144	A6E01_RS00370
A6E01_RS00395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6E01_RS00400	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6E01_RS00435	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00475	SM00344	helix_turn_helix ASNC type
A6E01_RS00525	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS00530	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00535	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00600	SM01004	Delta-aminolevulinic acid dehydratase
A6E01_RS00610	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6E01_RS00610	SM00474	3'-5' exonuclease
A6E01_RS00610	SM00475	5'-3' exonuclease
A6E01_RS00610	SM00482	DNA polymerase A domain
A6E01_RS00645	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS00650	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00650	SM00448	cheY-homologous receiver domain
A6E01_RS00655	SM00091	PAS domain
A6E01_RS00655	SM00387	Histidine kinase-like ATPases
A6E01_RS00655	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS00660	SM01230	A6E01_RS00660
A6E01_RS00700	SM00363	S4 RNA-binding domain
A6E01_RS00715	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6E01_RS00790	SM00387	Histidine kinase-like ATPases
A6E01_RS00790	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS00795	SM00448	cheY-homologous receiver domain
A6E01_RS00795	SM00862	Transcriptional regulatory protein, C terminal
A6E01_RS00810	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS00810	SM00732	Likely ribonuclease with RNase H fold.
A6E01_RS00815	SM00487	DEAD-like helicases superfamily
A6E01_RS00815	SM00490	helicase superfamily c-terminal domain
A6E01_RS00830	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A6E01_RS00830	SM01232	A6E01_RS00830
A6E01_RS00910	SM00858	A6E01_RS00910
A6E01_RS00950	SM00984	UDP binding domain
A6E01_RS00955	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS00955	SM01086	C-terminal, D2-small domain, of ClpB protein
A6E01_RS00970	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS00975	SM00487	DEAD-like helicases superfamily
A6E01_RS00975	SM00490	helicase superfamily c-terminal domain
A6E01_RS00985	SM00919	Malic enzyme, NAD binding domain
A6E01_RS00985	SM01274	A6E01_RS00985
A6E01_RS01025	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6E01_RS01145	SM01150	A6E01_RS01145
A6E01_RS01150	SM00100	Cyclic nucleotide-monophosphate binding domain
A6E01_RS01150	SM00419	helix_turn_helix, cAMP Regulatory protein
A6E01_RS01175	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS01245	SM00838	Elongation factor G C-terminus
A6E01_RS01245	SM00889	Elongation factor G, domain IV
A6E01_RS01255	SM01403	A6E01_RS01255
A6E01_RS01275	SM01382	A6E01_RS01275
A6E01_RS01275	SM01383	A6E01_RS01275
A6E01_RS01290	SM00322	K homology RNA-binding domain
A6E01_RS01310	SM01374	A6E01_RS01310
A6E01_RS01315	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6E01_RS01380	SM00363	S4 RNA-binding domain
A6E01_RS01380	SM01390	A6E01_RS01380
A6E01_RS01385	SM00662	RNA polymerases D
A6E01_RS01435	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS01490	SM00670	Large family of predicted nucleotide-binding domains
A6E01_RS01495	SM00487	DEAD-like helicases superfamily
A6E01_RS01495	SM00490	helicase superfamily c-terminal domain
A6E01_RS01590	SM00650	Ribosomal RNA adenine dimethylases
A6E01_RS01610	SM00271	DnaJ molecular chaperone homology domain
A6E01_RS01635	SM01329	A6E01_RS01635
A6E01_RS01640	SM00917	LeuA allosteric (dimerisation) domain
A6E01_RS01660	SM00014	Acid phosphatase homologues
A6E01_RS01710	SM00849	Metallo-beta-lactamase superfamily
A6E01_RS01760	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS01795	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS01810	SM00028	Tetratricopeptide repeats
A6E01_RS01840	SM00400	zinc finger
A6E01_RS01840	SM00493	A6E01_RS01840
A6E01_RS01840	SM00766	DNA primase DnaG DnaB-binding
A6E01_RS01865	SM01207	A6E01_RS01865
A6E01_RS01870	SM00905	Dihydroneopterin aldolase
A6E01_RS01890	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS01900	SM00287	Bacterial SH3 domain homologues
A6E01_RS01915	SM00880	A6E01_RS01915
A6E01_RS01915	SM01118	A6E01_RS01915
A6E01_RS01955	SM00387	Histidine kinase-like ATPases
A6E01_RS01955	SM00433	TopoisomeraseII
A6E01_RS01960	SM00434	DNA Topoisomerase IV
A6E01_RS01965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6E01_RS01970	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6E01_RS02020	SM00749	bacterial OsmY and nodulation domain
A6E01_RS02105	SM00842	Cell division protein FtsA
A6E01_RS02110	SM00864	Tubulin/FtsZ family, GTPase domain
A6E01_RS02110	SM00865	Tubulin/FtsZ family, C-terminal domain
A6E01_RS02125	SM00957	SecA DEAD-like domain
A6E01_RS02125	SM00958	SecA preprotein cross-linking domain
A6E01_RS02140	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6E01_RS02145	SM00851	MGS-like domain
A6E01_RS02145	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6E01_RS02195	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS02200	SM00073	Histidine Phosphotransfer domain
A6E01_RS02200	SM00091	PAS domain
A6E01_RS02200	SM00387	Histidine kinase-like ATPases
A6E01_RS02200	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS02200	SM00448	cheY-homologous receiver domain
A6E01_RS02210	SM00448	cheY-homologous receiver domain
A6E01_RS02210	SM00862	Transcriptional regulatory protein, C terminal
A6E01_RS02240	SM00518	AP endonuclease family 2
A6E01_RS02245	SM00986	Uracil DNA glycosylase superfamily
A6E01_RS02245	SM00987	UreE urease accessory protein, C-terminal domain 
A6E01_RS02280	SM00487	DEAD-like helicases superfamily
A6E01_RS02280	SM00490	helicase superfamily c-terminal domain
A6E01_RS02315	SM00937	A6E01_RS02315
A6E01_RS02325	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS02330	SM00020	Trypsin-like serine protease
A6E01_RS02345	SM01323	A6E01_RS02345
A6E01_RS02395	SM00448	cheY-homologous receiver domain
A6E01_RS02395	SM00850	LytTr DNA-binding domain
A6E01_RS02400	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6E01_RS02410	SM00830	Chorismate mutase type II
A6E01_RS02415	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS02435	SM00830	Chorismate mutase type II
A6E01_RS02445	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS02455	SM00363	S4 RNA-binding domain
A6E01_RS02465	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS02465	SM01086	C-terminal, D2-small domain, of ClpB protein
A6E01_RS02535	SM00448	cheY-homologous receiver domain
A6E01_RS02535	SM00862	Transcriptional regulatory protein, C terminal
A6E01_RS02540	SM00091	PAS domain
A6E01_RS02540	SM00387	Histidine kinase-like ATPases
A6E01_RS02540	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS02570	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS02600	SM00927	DNA mismatch repair enzyme MutH
A6E01_RS02610	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6E01_RS02645	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6E01_RS02660	SM00904	Riboflavin kinase
A6E01_RS02695	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS02695	SM00322	K homology RNA-binding domain
A6E01_RS02715	SM01387	A6E01_RS02715
A6E01_RS02720	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS02720	SM00322	K homology RNA-binding domain
A6E01_RS02725	SM00028	Tetratricopeptide repeats
A6E01_RS02735	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS02740	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS02805	SM01133	A6E01_RS02805
A6E01_RS02810	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A6E01_RS02835	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS02840	SM00838	Elongation factor G C-terminus
A6E01_RS02840	SM00889	Elongation factor G, domain IV
A6E01_RS02900	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS02905	SM00858	A6E01_RS02905
A6E01_RS02955	SM00028	Tetratricopeptide repeats
A6E01_RS02960	SM01038	Beta galactosidase small chain
A6E01_RS02965	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS03005	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS03045	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS03055	SM00925	MltA specific insert domain
A6E01_RS03090	SM00464	Found in ATP-dependent protease La (LON)
A6E01_RS03095	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
A6E01_RS03150	SM00900	A6E01_RS03150
A6E01_RS03195	SM00357	Cold shock protein domain
A6E01_RS03235	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS03235	SM00930	A6E01_RS03235
A6E01_RS03270	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS03285	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6E01_RS03345	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS03345	SM01091	Transporter associated domain
A6E01_RS03360	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS03455	SM01400	A6E01_RS03455
A6E01_RS03475	SM00937	A6E01_RS03475
A6E01_RS03515	SM00344	helix_turn_helix ASNC type
A6E01_RS03520	SM00363	S4 RNA-binding domain
A6E01_RS03525	SM00463	Small MutS-related domain
A6E01_RS03560	SM00421	helix_turn_helix, Lux Regulon
A6E01_RS03600	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS03615	SM01081	Putative carbohydrate binding domain
A6E01_RS03650	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS03650	SM00073	Histidine Phosphotransfer domain
A6E01_RS03650	SM00387	Histidine kinase-like ATPases
A6E01_RS03650	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS03650	SM00448	cheY-homologous receiver domain
A6E01_RS03655	SM00448	cheY-homologous receiver domain
A6E01_RS03655	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6E01_RS03660	SM00267	diguanylate cyclase
A6E01_RS03660	SM01079	A6E01_RS03660
A6E01_RS03675	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS03675	SM00994	ClpX C4-type zinc finger
A6E01_RS03675	SM01086	C-terminal, D2-small domain, of ClpB protein
A6E01_RS03680	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS03680	SM00464	Found in ATP-dependent protease La (LON)
A6E01_RS03685	SM00411	bacterial (prokaryotic) histone like domain
A6E01_RS03705	SM01144	A6E01_RS03705
A6E01_RS03710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6E01_RS03715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6E01_RS03740	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A6E01_RS03760	SM00978	A6E01_RS03760
A6E01_RS03795	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS03800	SM00642	Alpha-amylase domain
A6E01_RS03825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6E01_RS03840	SM00481	DNA polymerase alpha chain like domain
A6E01_RS03865	SM00052	Putative diguanylate phosphodiesterase
A6E01_RS03865	SM00267	diguanylate cyclase
A6E01_RS03870	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS03895	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS03965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6E01_RS03965	SM00895	A6E01_RS03965
A6E01_RS04000	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6E01_RS04045	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6E01_RS04110	SM00479	A6E01_RS04110
A6E01_RS04120	SM00478	endonuclease III
A6E01_RS04120	SM00525	A6E01_RS04120
A6E01_RS04130	SM00900	A6E01_RS04130
A6E01_RS04160	SM00487	DEAD-like helicases superfamily
A6E01_RS04160	SM00490	helicase superfamily c-terminal domain
A6E01_RS04165	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04165	SM00448	cheY-homologous receiver domain
A6E01_RS04180	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS04185	SM00852	Probable molybdopterin binding domain
A6E01_RS04220	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04225	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04270	SM00478	endonuclease III
A6E01_RS04270	SM01009	AlkA N-terminal domain
A6E01_RS04285	SM00990	A6E01_RS04285
A6E01_RS04295	SM00344	helix_turn_helix ASNC type
A6E01_RS04355	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04365	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS04390	SM01217	A6E01_RS04390
A6E01_RS04510	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS04520	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS04525	SM00838	Elongation factor G C-terminus
A6E01_RS04525	SM00889	Elongation factor G, domain IV
A6E01_RS04570	SM01217	A6E01_RS04570
A6E01_RS04585	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04650	SM00100	Cyclic nucleotide-monophosphate binding domain
A6E01_RS04650	SM00419	helix_turn_helix, cAMP Regulatory protein
A6E01_RS04680	SM00342	helix_turn_helix, arabinose operon control protein
A6E01_RS04720	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04745	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6E01_RS04745	SM01134	A6E01_RS04745
A6E01_RS04760	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04765	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04780	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS04785	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A6E01_RS04800	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A6E01_RS04825	SM00346	helix_turn_helix isocitrate lyase regulation
A6E01_RS04850	SM00563	Phosphate acyltransferases
A6E01_RS04855	SM01266	A6E01_RS04855
A6E01_RS04865	SM00387	Histidine kinase-like ATPases
A6E01_RS04865	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS04870	SM00448	cheY-homologous receiver domain
A6E01_RS04870	SM00862	Transcriptional regulatory protein, C terminal
A6E01_RS04895	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS04945	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS04995	SM00487	DEAD-like helicases superfamily
A6E01_RS04995	SM00490	helicase superfamily c-terminal domain
A6E01_RS04995	SM00982	A6E01_RS04995
A6E01_RS04995	SM01058	CarD-like/TRCF domain
A6E01_RS05005	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05020	SM00849	Metallo-beta-lactamase superfamily
A6E01_RS05025	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05055	SM00763	PrkA AAA domain
A6E01_RS05090	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05095	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS05095	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6E01_RS05130	SM00491	A6E01_RS05130
A6E01_RS05200	SM00357	Cold shock protein domain
A6E01_RS05210	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05210	SM01086	C-terminal, D2-small domain, of ClpB protein
A6E01_RS05215	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS05250	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6E01_RS05250	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6E01_RS05250	SM00493	A6E01_RS05250
A6E01_RS05260	SM00528	Domain in histone-like proteins of HNS family
A6E01_RS05330	SM00840	A6E01_RS05330
A6E01_RS05360	SM01131	A6E01_RS05360
A6E01_RS05365	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05370	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05390	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05475	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6E01_RS05475	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05495	SM00360	RNA recognition motif
A6E01_RS05530	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A6E01_RS05545	SM00155	Phospholipase D. Active site motifs.
A6E01_RS05650	SM00481	DNA polymerase alpha chain like domain
A6E01_RS05660	SM00363	S4 RNA-binding domain
A6E01_RS05735	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS05755	SM00422	helix_turn_helix, mercury resistance
A6E01_RS05780	SM00486	DNA polymerase type-B family
A6E01_RS05785	SM00421	helix_turn_helix, Lux Regulon
A6E01_RS05785	SM00448	cheY-homologous receiver domain
A6E01_RS05790	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6E01_RS05790	SM00465	GIY-YIG type nucleases (URI domain)
A6E01_RS05865	SM00342	helix_turn_helix, arabinose operon control protein
A6E01_RS06015	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6E01_RS06045	SM00450	Rhodanese Homology Domain
A6E01_RS06075	SM00873	B3/4 domain
A6E01_RS06075	SM00874	tRNA synthetase B5 domain
A6E01_RS06075	SM00896	Ferredoxin-fold anticodon binding domain
A6E01_RS06080	SM00487	DEAD-like helicases superfamily
A6E01_RS06080	SM00490	helicase superfamily c-terminal domain
A6E01_RS06095	SM00220	Serine/Threonine protein kinases, catalytic domain
A6E01_RS06150	SM00903	Flavin reductase like domain
A6E01_RS06160	SM01022	A6E01_RS06160
A6E01_RS06165	SM00363	S4 RNA-binding domain
A6E01_RS06185	SM00411	bacterial (prokaryotic) histone like domain
A6E01_RS06210	SM00479	A6E01_RS06210
A6E01_RS06360	SM00342	helix_turn_helix, arabinose operon control protein
A6E01_RS06465	SM01144	A6E01_RS06465
A6E01_RS06525	SM00100	Cyclic nucleotide-monophosphate binding domain
A6E01_RS06525	SM00419	helix_turn_helix, cAMP Regulatory protein
A6E01_RS06615	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS06625	SM00981	A6E01_RS06625
A6E01_RS06655	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6E01_RS06655	SM00245	tail specific protease
A6E01_RS06660	SM00945	ProQ/FINO family
A6E01_RS06685	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS06720	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS06735	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS06755	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A6E01_RS06760	SM00112	Cadherin repeats.
A6E01_RS06805	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS06835	SM00919	Malic enzyme, NAD binding domain
A6E01_RS06835	SM01274	A6E01_RS06835
A6E01_RS06845	SM00267	diguanylate cyclase
A6E01_RS06850	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6E01_RS06885	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A6E01_RS06905	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS06905	SM00487	DEAD-like helicases superfamily
A6E01_RS06905	SM00490	helicase superfamily c-terminal domain
A6E01_RS06905	SM00847	Helicase associated domain (HA2)  Add an annotation
A6E01_RS06930	SM00479	A6E01_RS06930
A6E01_RS06975	SM00091	PAS domain
A6E01_RS06975	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS07025	SM00100	Cyclic nucleotide-monophosphate binding domain
A6E01_RS07025	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS07030	SM00479	A6E01_RS07030
A6E01_RS07040	SM01022	A6E01_RS07040
A6E01_RS07070	SM00849	Metallo-beta-lactamase superfamily
A6E01_RS07085	SM00434	DNA Topoisomerase IV
A6E01_RS07115	SM00852	Probable molybdopterin binding domain
A6E01_RS07150	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS07170	SM00363	S4 RNA-binding domain
A6E01_RS07175	SM00487	DEAD-like helicases superfamily
A6E01_RS07175	SM00490	helicase superfamily c-terminal domain
A6E01_RS07205	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS07225	SM00919	Malic enzyme, NAD binding domain
A6E01_RS07225	SM01274	A6E01_RS07225
A6E01_RS07240	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS07245	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS07250	SM00829	Enoylreductase
A6E01_RS07270	SM00100	Cyclic nucleotide-monophosphate binding domain
A6E01_RS07270	SM00387	Histidine kinase-like ATPases
A6E01_RS07275	SM00448	cheY-homologous receiver domain
A6E01_RS07300	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS07430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6E01_RS07430	SM00895	A6E01_RS07430
A6E01_RS07455	SM00487	DEAD-like helicases superfamily
A6E01_RS07455	SM00490	helicase superfamily c-terminal domain
A6E01_RS07465	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6E01_RS07465	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6E01_RS07480	SM00450	Rhodanese Homology Domain
A6E01_RS07535	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS07540	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS07595	SM00422	helix_turn_helix, mercury resistance
A6E01_RS07695	SM00487	DEAD-like helicases superfamily
A6E01_RS07695	SM00490	helicase superfamily c-terminal domain
A6E01_RS07715	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A6E01_RS07760	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS07770	SM00852	Probable molybdopterin binding domain
A6E01_RS07830	SM00341	Helicase and RNase D C-terminal
A6E01_RS07830	SM00487	DEAD-like helicases superfamily
A6E01_RS07830	SM00490	helicase superfamily c-terminal domain
A6E01_RS07830	SM00956	A6E01_RS07830
A6E01_RS07835	SM00450	Rhodanese Homology Domain
A6E01_RS07875	SM00487	DEAD-like helicases superfamily
A6E01_RS07875	SM00490	helicase superfamily c-terminal domain
A6E01_RS08075	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS08080	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6E01_RS08160	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS08240	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS08240	SM00876	Biotin and Thiamin Synthesis associated domain
A6E01_RS08255	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS08265	SM00843	A6E01_RS08265
A6E01_RS08270	SM00344	helix_turn_helix ASNC type
A6E01_RS08275	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6E01_RS08275	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6E01_RS08295	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6E01_RS08300	SM00028	Tetratricopeptide repeats
A6E01_RS08310	SM00411	bacterial (prokaryotic) histone like domain
A6E01_RS08315	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS08345	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6E01_RS08345	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6E01_RS08345	SM00493	A6E01_RS08345
A6E01_RS08365	SM00870	A6E01_RS08365
A6E01_RS08390	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6E01_RS08425	SM00493	A6E01_RS08425
A6E01_RS08435	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS08450	SM00448	cheY-homologous receiver domain
A6E01_RS08495	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6E01_RS08505	SM00825	Beta-ketoacyl synthase
A6E01_RS08550	SM00463	Small MutS-related domain
A6E01_RS08555	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
A6E01_RS08560	SM00855	Phosphoglycerate mutase family
A6E01_RS08650	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS08685	SM00872	Alpha mannosidase, middle domain
A6E01_RS08695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6E01_RS08695	SM00866	A6E01_RS08695
A6E01_RS08735	SM00226	Low molecular weight phosphatase family
A6E01_RS08830	SM00825	Beta-ketoacyl synthase
A6E01_RS08840	SM00822	A6E01_RS08840
A6E01_RS08845	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6E01_RS08875	SM00363	S4 RNA-binding domain
A6E01_RS08880	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS08940	SM00530	Helix-turn-helix XRE-family like proteins 
A6E01_RS08975	SM01120	A6E01_RS08975
A6E01_RS09080	SM00474	3'-5' exonuclease
A6E01_RS09105	SM00487	DEAD-like helicases superfamily
A6E01_RS09105	SM00491	A6E01_RS09105
A6E01_RS09120	SM00836	DALR anticodon binding domain
A6E01_RS09120	SM01016	Arginyl tRNA synthetase N terminal dom
A6E01_RS09125	SM01131	A6E01_RS09125
A6E01_RS09175	SM00899	A6E01_RS09175
A6E01_RS09185	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS09195	SM00881	CoA binding domain
A6E01_RS09210	SM00861	Transketolase, pyrimidine binding domain
A6E01_RS09270	SM00354	helix_turn _helix lactose operon repressor
A6E01_RS09350	SM00267	diguanylate cyclase
A6E01_RS09360	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6E01_RS09375	SM00387	Histidine kinase-like ATPases
A6E01_RS09380	SM00862	Transcriptional regulatory protein, C terminal
A6E01_RS09395	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS09400	SM00938	Nitrogen regulatory protein P-II
A6E01_RS09425	SM00244	prohibitin homologues
A6E01_RS09435	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6E01_RS09435	SM00292	breast cancer carboxy-terminal domain
A6E01_RS09435	SM00532	Ligase N family
A6E01_RS09440	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A6E01_RS09515	SM01130	A6E01_RS09515
A6E01_RS09600	SM00479	A6E01_RS09600
A6E01_RS09615	SM00849	Metallo-beta-lactamase superfamily
A6E01_RS09620	SM00257	Lysin motif
A6E01_RS09630	SM00938	Nitrogen regulatory protein P-II
A6E01_RS09640	SM00977	TilS substrate C-terminal domain
A6E01_RS09650	SM00481	DNA polymerase alpha chain like domain
A6E01_RS09680	SM00935	Outer membrane protein (OmpH-like)
A6E01_RS09690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6E01_RS09735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6E01_RS09740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6E01_RS09815	SM00028	Tetratricopeptide repeats
A6E01_RS09825	SM00475	5'-3' exonuclease
A6E01_RS09845	SM00981	A6E01_RS09845
A6E01_RS09860	SM00861	Transketolase, pyrimidine binding domain
A6E01_RS09910	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A6E01_RS09945	SM01211	A6E01_RS09945
A6E01_RS09950	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS09965	SM00829	Enoylreductase
A6E01_RS10000	SM00271	DnaJ molecular chaperone homology domain
A6E01_RS10100	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10115	SM00062	Bacterial periplasmic substrate-binding proteins
A6E01_RS10120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6E01_RS10135	SM00822	A6E01_RS10135
A6E01_RS10190	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6E01_RS10210	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10235	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS10235	SM01240	A6E01_RS10235
A6E01_RS10250	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10255	SM00564	beta-propeller repeat
A6E01_RS10280	SM00028	Tetratricopeptide repeats
A6E01_RS10285	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS10290	SM00562	A6E01_RS10290
A6E01_RS10315	SM00271	DnaJ molecular chaperone homology domain
A6E01_RS10360	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10370	SM01103	A6E01_RS10370
A6E01_RS10395	SM00363	S4 RNA-binding domain
A6E01_RS10440	SM00091	PAS domain
A6E01_RS10440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6E01_RS10440	SM00387	Histidine kinase-like ATPases
A6E01_RS10440	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS10440	SM00448	cheY-homologous receiver domain
A6E01_RS10460	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10465	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10480	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10500	SM00938	Nitrogen regulatory protein P-II
A6E01_RS10540	SM00487	DEAD-like helicases superfamily
A6E01_RS10540	SM00490	helicase superfamily c-terminal domain
A6E01_RS10540	SM00847	Helicase associated domain (HA2)  Add an annotation
A6E01_RS10585	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10590	SM00947	Carbonic anhydrase
A6E01_RS10615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6E01_RS10615	SM00895	A6E01_RS10615
A6E01_RS10620	SM00644	A6E01_RS10620
A6E01_RS10685	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10685	SM00962	SRP54-type protein, GTPase domain
A6E01_RS10685	SM00963	SRP54-type protein, helical bundle domain
A6E01_RS10695	SM01091	Transporter associated domain
A6E01_RS10785	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6E01_RS10795	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS10805	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6E01_RS10805	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6E01_RS10815	SM00257	Lysin motif
A6E01_RS10850	SM01192	A6E01_RS10850
A6E01_RS10850	SM01193	A6E01_RS10850
A6E01_RS10865	SM00954	Region found in RelA / SpoT proteins
A6E01_RS10875	SM00073	Histidine Phosphotransfer domain
A6E01_RS10875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6E01_RS10875	SM00387	Histidine kinase-like ATPases
A6E01_RS10875	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS10875	SM00448	cheY-homologous receiver domain
A6E01_RS10900	SM00358	Double-stranded RNA binding motif
A6E01_RS10900	SM00535	Ribonuclease III family
A6E01_RS10910	SM00838	Elongation factor G C-terminus
A6E01_RS11020	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6E01_RS11025	SM00861	Transketolase, pyrimidine binding domain
A6E01_RS11040	SM00731	SprT homologues.
A6E01_RS11065	SM00732	Likely ribonuclease with RNase H fold.
A6E01_RS11105	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6E01_RS11125	SM00478	endonuclease III
A6E01_RS11125	SM00525	A6E01_RS11125
A6E01_RS11220	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6E01_RS11220	SM01134	A6E01_RS11220
A6E01_RS11230	SM00342	helix_turn_helix, arabinose operon control protein
A6E01_RS11250	SM00633	Glycosyl hydrolase family 10
A6E01_RS11270	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS11275	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS11290	SM00861	Transketolase, pyrimidine binding domain
A6E01_RS11375	SM00563	Phosphate acyltransferases
A6E01_RS11410	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS11440	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS11470	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS11470	SM00924	MgtE intracellular N domain
A6E01_RS11500	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS11590	SM00965	Secretin and TonB N terminus short domain
A6E01_RS11610	SM00052	Putative diguanylate phosphodiesterase
A6E01_RS11610	SM00267	diguanylate cyclase
A6E01_RS11620	SM00421	helix_turn_helix, Lux Regulon
A6E01_RS11650	SM01018	B12 binding domain
A6E01_RS11795	SM01005	Alanine racemase, C-terminal domain
A6E01_RS11800	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS11835	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6E01_RS11840	SM00316	Ribosomal protein S1-like RNA-binding domain
A6E01_RS11840	SM00357	Cold shock protein domain
A6E01_RS11840	SM00955	A6E01_RS11840
A6E01_RS11855	SM00788	Adenylosuccinate synthetase
A6E01_RS11865	SM00244	prohibitin homologues
A6E01_RS11870	SM00244	prohibitin homologues
A6E01_RS11890	SM00853	MutL C terminal dimerisation domain
A6E01_RS11890	SM01340	A6E01_RS11890
A6E01_RS11895	SM00257	Lysin motif
A6E01_RS11895	SM00646	A6E01_RS11895
A6E01_RS11955	SM00479	A6E01_RS11955
A6E01_RS12025	SM00841	Elongation factor P, C-terminal
A6E01_RS12025	SM01185	A6E01_RS12025
A6E01_RS12040	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS12045	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS12050	SM00642	Alpha-amylase domain
A6E01_RS12060	SM00883	Chaperonin 10 Kd subunit
A6E01_RS12070	SM00971	Serine acetyltransferase, N-terminal
A6E01_RS12085	SM00450	Rhodanese Homology Domain
A6E01_RS12140	SM00448	cheY-homologous receiver domain
A6E01_RS12140	SM00862	Transcriptional regulatory protein, C terminal
A6E01_RS12145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6E01_RS12145	SM00387	Histidine kinase-like ATPases
A6E01_RS12145	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS12160	SM01321	A6E01_RS12160
A6E01_RS12180	SM00421	helix_turn_helix, Lux Regulon
A6E01_RS12180	SM00448	cheY-homologous receiver domain
A6E01_RS12200	SM00387	Histidine kinase-like ATPases
A6E01_RS12200	SM00388	His Kinase A (phosphoacceptor) domain
A6E01_RS12200	SM00448	cheY-homologous receiver domain
A6E01_RS12210	SM00100	Cyclic nucleotide-monophosphate binding domain
A6E01_RS12210	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6E01_RS12215	SM00479	A6E01_RS12215
A6E01_RS12235	SM00878	Biotin carboxylase C-terminal domain
A6E01_RS12265	SM00422	helix_turn_helix, mercury resistance
A6E01_RS12270	SM00798	AICARFT/IMPCHase bienzyme
A6E01_RS12270	SM00851	MGS-like domain
A6E01_RS12275	SM01209	A6E01_RS12275
A6E01_RS12275	SM01210	A6E01_RS12275
A6E01_RS12285	SM00342	helix_turn_helix, arabinose operon control protein
A6E01_RS12295	SM00411	bacterial (prokaryotic) histone like domain
A6E01_RS12340	SM00072	Guanylate kinase homologues.
A6E01_RS12345	SM01409	A6E01_RS12345
A6E01_RS12350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6E01_RS12350	SM00954	Region found in RelA / SpoT proteins
A6E01_RS12405	SM00663	RNA polymerase I subunit A N-terminus
A6E01_RS12430	SM00649	Ribosomal protein L11/L12
A6E01_RS12435	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6E01_RS12435	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6E01_RS12490	SM00155	Phospholipase D. Active site motifs.
A6E01_RS12560	SM00360	RNA recognition motif
A6E01_RS12605	SM00563	Phosphate acyltransferases
A6E01_RS12625	SM00450	Rhodanese Homology Domain
A6E01_RS12640	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS12645	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS12645	SM00962	SRP54-type protein, GTPase domain
A6E01_RS12645	SM00963	SRP54-type protein, helical bundle domain
A6E01_RS12800	SM00357	Cold shock protein domain
A6E01_RS12800	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS12800	SM00959	Rho termination factor, N-terminal domain
A6E01_RS12810	SM00487	DEAD-like helicases superfamily
A6E01_RS12810	SM00490	helicase superfamily c-terminal domain
A6E01_RS12835	SM00341	Helicase and RNase D C-terminal
A6E01_RS12835	SM00487	DEAD-like helicases superfamily
A6E01_RS12835	SM00490	helicase superfamily c-terminal domain
A6E01_RS12835	SM00956	A6E01_RS12835
A6E01_RS12895	SM00876	Biotin and Thiamin Synthesis associated domain
A6E01_RS12985	SM00829	Enoylreductase
A6E01_RS13010	SM00836	DALR anticodon binding domain
A6E01_RS13030	SM00862	Transcriptional regulatory protein, C terminal
A6E01_RS13040	SM00387	Histidine kinase-like ATPases
A6E01_RS13040	SM00433	TopoisomeraseII
A6E01_RS13050	SM00480	DNA polymerase III beta subunit
A6E01_RS13565	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6E01_RS13565	SM00474	3'-5' exonuclease
A6E01_RS18115	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A6E01_RS18555	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6E01_RS18865	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS18865	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6E01_RS19055	SM00382	ATPases associated with a variety of cellular activities
A6E01_RS19795	SM00487	DEAD-like helicases superfamily
A6E01_RS20710	SM00650	Ribosomal RNA adenine dimethylases
